isoform chrom strand length exons structural_category associated_gene associated_transcript ref_length ref_exons diff_to_TSS diff_to_TTS subcategory RTS_stage all_canonical min_sample_cov min_cov min_cov_pos sd_cov FL n_indels n_indels_junc bite iso_exp gene_exp ratio_exp FSM_class coding ORF_length CDS_length CDS_start CDS_end perc_A_downstream_TTS PB.3910.1 chr6 + 2937 1 genic_intron novelGene_1141 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A coding 110 330 1877 2206 90 PB.10565.1 chr19 - 1242 3 full-splice_match C19H19orf25 rna57166 1637 3 389 6 multi-exon FALSE canonical 18 30 35 88 10 0 0 FALSE 0 0 NA A coding 118 354 38 391 5 PB.1591.1 chr2 + 4132 23 full-splice_match SCAP rna8588 4178 23 44 2 multi-exon FALSE canonical 19 28 2287 287.097544399 2 0 0 FALSE 0 0 NA A coding 1278 3834 159 3992 20 PB.5575.1 chr8 - 1642 1 genic_intron novelGene_2217 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.7470.1 chr12 + 2678 1 genic_intron novelGene_686 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 13 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.6488.4 chr10 + 3057 7 novel_not_in_catalog SMARCB1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1721 291.357169124 2 2 0 TRUE 0 0 NA C coding 287 861 173 1033 90 PB.3742.1 chr5 + 3067 14 full-splice_match GUCY1B3 rna20317 3102 14 62 -27 multi-exon FALSE canonical 34 524 33 264.408774438 77 0 0 FALSE 0 0 NA A coding 619 1857 31 1887 20 PB.6488.1 chr10 + 1642 9 full-splice_match SMARCB1 rna35343 1601 9 -34 -7 multi-exon FALSE canonical 43 314 1282 185.547837498 72 0 0 FALSE 0 0 NA C coding 376 1128 192 1319 30 PB.6488.3 chr10 + 1651 9 full-splice_match SMARCB1 rna35342 1698 9 33 14 multi-exon FALSE canonical 38 314 1292 189.303988336 10 1 0 FALSE 0 0 NA C coding 385 1155 175 1329 30 PB.6488.2 chr10 + 1662 9 novel_not_in_catalog SMARCB1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 415 270.501386318 7 0 0 FALSE 0 0 NA C coding 311 933 413 1345 30 PB.8351.2 chr14 - 2924 16 full-splice_match KLC2 rna45156 2664 16 -91 -169 multi-exon FALSE canonical 2 2 107 242.334479594 2 0 0 FALSE 0 0 NA A coding 622 1866 156 2021 10 PB.9973.11 chr16 + 2503 1 novel_in_catalog PITPNC1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA C coding 127 381 1245 1625 85 PB.11017.1 chr19 + 3030 6 full-splice_match ZNF227 rna59525 3101 6 52 19 multi-exon FALSE canonical 38 299 54 124.201449267 2 1 0 FALSE 0 0 NA A coding 796 2388 216 2603 35 PB.10650.1 chr19 + 3657 1 antisense novelGene_DENND1C_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.1280.2 chr2 + 2695 1 novel_in_catalog SLC35A5 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 8 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 0 PB.792.1 chr1 - 1515 9 novel_not_in_catalog SH2D2A novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 82 10.5356537529 3 3 1 TRUE 0 0 NA C coding 369 1107 76 1182 20 PB.240.2 chr1 - 2188 6 full-splice_match SRSF4 rna1190 2198 6 -83 93 multi-exon FALSE canonical 42 346 817 260.0942137 2 0 0 FALSE 0 0 NA C coding 494 1482 150 1631 75 PB.1280.1 chr2 + 2847 7 full-splice_match SLC35A5 rna6970 2910 7 54 9 multi-exon FALSE canonical 48 824 161 275.132695258 73 1 0 FALSE 0 0 NA C coding 408 1224 229 1452 10 PB.4689.4 chr7 + 1792 7 full-splice_match ZFAND6 rna25347 1759 7 -39 6 multi-exon FALSE canonical 30 66 225 896.86342327 9 0 0 FALSE 0 0 NA C coding 208 624 406 1029 25 PB.4689.5 chr7 + 1674 1 genic_intron novelGene_1174 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.7847.1 chr13 - 3239 7 full-splice_match E2F6 rna42548 1512 7 -15 -1712 multi-exon FALSE canonical 30 120 381 127.726269812 2 5 0 FALSE 0 0 NA A coding 281 843 274 1116 5 PB.4689.1 chr7 + 1518 6 full-splice_match ZFAND6 rna25344 1667 6 127 22 multi-exon FALSE canonical 36 119 120 877.931660211 56 2 0 FALSE 0 0 NA C coding 208 624 138 761 35 PB.4689.2 chr7 + 1685 7 full-splice_match ZFAND6 rna25345 1817 7 119 13 multi-exon FALSE canonical 27 62 124 898.022828218 10 0 0 FALSE 0 0 NA C coding 208 624 305 928 35 PB.4689.3 chr7 + 1629 6 full-splice_match ZFAND6 rna25348 1593 6 -47 11 multi-exon FALSE canonical 31 87 231 890.175825329 19 1 0 FALSE 0 0 NA C coding 208 624 249 872 35 PB.7956.2 chr13 - 1648 2 novel_not_in_catalog LOC100425937 novel NA NA NA NA not any annotated donor/acceptor FALSE non_canonical 0 0 816 NA 3 2 1 FALSE 0 0 NA C coding 242 726 63 788 70 PB.7484.1 chr12 + 706 1 full-splice_match LOC706496 rna40326 715 1 1 8 mono-exon FALSE canonical NA NA NA NA 7 0 NA FALSE 0 0 NA A coding 192 576 26 601 80 PB.11485.3 chr20 + 3827 30 full-splice_match ITGAX rna62022 3878 30 51 0 multi-exon FALSE canonical 17 28 385 68.8258672303 2 2 0 FALSE 0 0 NA C coding 1154 3462 68 3529 25 PB.11485.2 chr20 + 4208 31 full-splice_match ITGAX rna62020 3637 31 36 -607 multi-exon FALSE canonical 17 28 400 71.5052445629 3 2 0 FALSE 0 0 NA C coding 1154 3462 83 3544 20 PB.11485.1 chr20 + 4225 31 full-splice_match ITGAX rna62021 3638 31 29 -616 multi-exon FALSE canonical 13 28 407 70.52659073 2 3 0 FALSE 0 0 NA C coding 1154 3462 90 3551 50 PB.250.4 chr1 - 1841 7 novel_not_in_catalog PTP4A2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 69 2780.53394153 5 2 1 TRUE 0 0 NA B coding 167 501 729 1229 90 PB.250.1 chr1 - 1597 1 incomplete-splice_match PTP4A2 rna1268 3457 6 1860 1 mono-exon FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA B non_coding NA NA NA NA 5 PB.7339.4 chr11 - 5561 16 novel_not_in_catalog CAMKK2 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 4554 249.218779389 2 17 0 TRUE 0 0 NA C coding 286 858 137 994 90 PB.10418.2 chr18 - 2796 11 full-splice_match SS18 rna56282 3683 11 298 589 multi-exon FALSE canonical 45 515 910 440.241978916 8 3 0 FALSE 0 0 NA C coding 418 1254 31 1284 50 PB.9878.1 chr16 - 2665 3 full-splice_match MEOX1 rna53566 2700 3 25 10 multi-exon FALSE canonical 6 15 864 0 3 2 0 FALSE 0 0 NA A coding 254 762 396 1157 45 PB.5794.2 chr9 + 2915 14 novel_in_catalog ANXA11 novel NA NA NA NA combination_of_known_junctions TRUE canonical 31 189 233 747.71852993 2 7 0 FALSE 0 0 NA C coding 236 708 1671 2378 90 PB.10418.1 chr18 - 2711 10 full-splice_match SS18 rna56283 2865 10 42 112 multi-exon FALSE canonical 45 614 107 377.023871923 37 0 0 FALSE 0 0 NA C coding 387 1161 39 1199 50 PB.8045.2 chr13 - 3699 7 full-splice_match PELI1 rna43620 1709 7 -309 -1681 multi-exon FALSE canonical 16 22 346 240.36846715 2 0 0 FALSE 0 0 NA C coding 418 1254 416 1669 30 PB.8045.3 chr13 - 2446 8 novel_in_catalog PELI1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 42 323 346 162.373027317 55 0 0 FALSE 0 0 NA C coding 418 1254 526 1779 30 PB.10418.4 chr18 - 3710 5 novel_in_catalog SS18 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 614 108 354.340231981 2 16 0 FALSE 0 0 NA C coding 204 612 40 651 70 PB.4941.1 chr7 - 4085 18 full-splice_match EXOC5 rna26671 3147 18 8 -946 multi-exon FALSE canonical 44 568 248 497.03018017 27 1 0 FALSE 0 0 NA C coding 708 2124 222 2345 70 PB.7086.1 chr11 - 1464 7 full-splice_match TMBIM4 rna38487 1903 7 49 390 multi-exon FALSE canonical 47 2135 164 656.284237202 22 6 0 FALSE 0 0 NA C coding 238 714 68 781 30 PB.10446.1 chr18 - 1687 7 full-splice_match TPGS2 rna56436 1863 7 205 -29 multi-exon FALSE canonical 42 571 134 467.341416953 13 0 0 FALSE 0 0 NA A coding 300 900 50 949 25 PB.2975.1 chr4 - 3252 5 full-splice_match RCAN2 rna16183 3380 5 116 12 multi-exon FALSE canonical 25 215 127 428.181036479 3 0 0 FALSE 0 0 NA A coding 243 729 130 858 20 PB.5846.2 chr9 - 2636 3 full-splice_match EIF4EBP2 rna31909 3484 3 -94 942 multi-exon FALSE canonical 44 425 371 285.499562171 26 2 0 FALSE 0 0 NA C coding 120 360 227 586 55 PB.5846.1 chr9 - 1132 1 incomplete-splice_match EIF4EBP2 rna31909 3484 3 1499 854 mono-exon FALSE canonical NA NA NA NA 10 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 40 PB.2110.1 chr3 - 2646 1 genic_intron novelGene_727 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 55 PB.6006.1 chr9 + 6377 40 full-splice_match GBF1 rna32754 6426 40 41 8 multi-exon FALSE canonical 30 135 5540 188.692872149 17 5 0 FALSE 0 0 NA A coding 1855 5565 254 5818 15 PB.4812.6 chr7 + 2384 7 novel_not_in_catalog LRP10 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 535 124.229626096 2 12 0 TRUE 0 0 NA C coding 231 693 1141 1833 30 PB.10739.1 chr19 - 1334 9 incomplete-splice_match DHPS rna57980 2167 17 -84 917 internal_fragment FALSE canonical 36 495 1127 159.67466925 9 0 0 FALSE 0 0 NA A coding 369 1107 114 1220 5 PB.2588.1 chr3 - 5543 6 novel_in_catalog ZC3HAV1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 696 2218 213.082143785 2 16 0 FALSE 0 0 NA A coding 688 2064 382 2445 70 PB.5569.7 chr8 - 2659 1 novel_in_catalog SLA novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA B coding 142 426 1305 1730 90 PB.1521.1 chr2 + 640 4 full-splice_match RPL29 rna8190 771 4 108 23 multi-exon FALSE canonical 47 12579 39 4359.47726224 5 2 0 FALSE 0 0 NA A coding 157 471 48 518 15 PB.4251.4 chr6 - 3411 19 incomplete-splice_match CSF1R rna23012 4077 21 660 6 5prime_fragment FALSE canonical 28 278 1203 221.318774622 5 2 0 FALSE 0 0 NA C coding 796 2388 234 2621 20 PB.9508.1 chr16 + 3483 9 full-splice_match BCL6B rna51658 3522 9 33 6 multi-exon FALSE canonical 0 0 47 90.3216474606 2 1 0 FALSE 0 0 NA A coding 474 1422 60 1481 0 PB.5569.3 chr8 - 3061 7 novel_in_catalog SLA novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 531 62 274.548720631 2 8 0 FALSE 0 0 NA B coding 206 618 103 720 65 PB.5569.1 chr8 - 1839 8 incomplete-splice_match SLA rna30062 3257 9 487 931 5prime_fragment FALSE canonical 34 531 101 254.958820204 54 3 0 FALSE 0 0 NA B coding 276 828 142 969 65 PB.4290.18 chr6 + 2752 1 novel_in_catalog CYFIP2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 95 PB.9084.1 chr15 + 600 7 full-splice_match RPL12 rna49354 603 7 -7 10 multi-exon FALSE canonical 48 10966 557 5437.55799969 8 0 0 FALSE 0 0 NA A coding 165 495 66 560 15 PB.1223.1 chr2 - 3483 3 full-splice_match CGGBP1 rna6655 4151 3 -1 669 multi-exon FALSE canonical 47 703 155 437.499714286 34 10 0 FALSE 0 0 NA C coding 167 501 384 884 15 PB.8059.1 chr13 + 2952 6 full-splice_match ETAA1 rna43666 4901 6 18 1931 multi-exon FALSE canonical 37 147 339 334.324692477 6 1 0 FALSE 0 0 NA C coding 896 2688 117 2804 35 PB.3082.1 chr4 - 1484 1 novel_in_catalog PRDM1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.5569.8 chr8 - 1573 1 novel_in_catalog SLA novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 18 2 NA FALSE 0 0 NA B coding 91 273 155 427 85 PB.1223.4 chr2 - 1566 1 genic CGGBP1 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 70 PB.5549.1 chr8 + 2845 3 full-splice_match TRIB1 rna29996 3641 3 788 8 multi-exon FALSE canonical 25 85 154 118.498945143 4 2 0 FALSE 0 0 NA A coding 206 618 293 910 30 PB.2504.2 chr3 + 2639 1 genic_intron novelGene_2305 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.3925.1 chr6 - 1580 3 intergenic novelGene_1175 novel NA NA NA NA no_subcategory FALSE canonical 0 0 75 1.41421356237 2 0 0 FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.8281.2 chr14 - 4042 2 genic_intron novelGene_95 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 816 NA 2 8 0 FALSE 0 0 NA B non_coding NA NA NA NA 75 PB.1362.3 chr2 - 1777 11 full-splice_match TPRA1 rna7309 1796 11 12 7 multi-exon FALSE canonical 8 10 196 154.055184918 2 1 0 FALSE 0 0 NA C coding 373 1119 214 1332 30 PB.6882.2 chr11 - 2876 13 full-splice_match PKP2 rna37457 4308 13 72 1360 multi-exon FALSE canonical 23 248 260 128.121036524 32 0 0 FALSE 0 0 NA A coding 837 2511 38 2548 35 PB.1362.1 chr2 - 1661 11 full-splice_match TPRA1 rna7315 1676 11 16 -1 multi-exon FALSE canonical 25 63 77 140.595163501 10 1 0 FALSE 0 0 NA C coding 373 1119 95 1213 30 PB.4647.1 chr7 - 1351 11 full-splice_match UBL7 rna25109 1372 11 11 10 multi-exon FALSE canonical 36 362 1106 316.493285869 17 0 0 FALSE 0 0 NA C coding 380 1140 102 1241 10 PB.7823.1 chr13 + 3681 1 genic_intron novelGene_112 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A coding 53 159 136 294 60 PB.12109.1 chrX + 2856 1 incomplete-splice_match VMA21 rna65464 4702 3 1843 4 mono-exon FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 15 PB.1908.2 chr2 + 1868 1 novel_in_catalog OXSM novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA C coding 132 396 1433 1828 45 PB.5238.2 chr8 + 3716 21 full-splice_match CCAR2 rna28519 3800 21 75 9 multi-exon FALSE canonical 35 143 2896 262.630919733 61 4 0 FALSE 0 0 NA C coding 923 2769 170 2938 45 PB.5238.1 chr8 + 3654 21 full-splice_match CCAR2 rna28521 3692 21 27 11 multi-exon FALSE canonical 35 143 2836 265.454327522 32 1 0 FALSE 0 0 NA C coding 920 2760 119 2878 45 PB.1956.7 chr2 + 1485 1 genic_intron novelGene_2622 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11245.1 chr20 + 1129 7 novel_not_in_catalog UBE2I novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 103 674.318915647 44 5 0 FALSE 0 0 NA B coding 158 474 115 588 30 PB.448.3 chr1 - 3657 18 novel_not_in_catalog JAK1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 13 38 51 687.632896246 38 0 0 FALSE 0 0 NA B coding 693 2079 259 2337 25 PB.11431.4 chr20 - 1648 12 novel_not_in_catalog LAT novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 478 152.105226735 2 3 0 FALSE 0 0 NA B coding 232 696 316 1011 55 PB.11245.2 chr20 + 2801 1 novel_in_catalog UBE2I novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.8402.1 chr14 - 3115 17 full-splice_match RPS6KA4 rna45386 3117 17 2 0 multi-exon FALSE canonical 7 11 2185 112.42775458 8 4 0 FALSE 0 0 NA A coding 772 2316 65 2380 10 PB.11431.3 chr20 - 1800 11 novel_in_catalog LAT novel NA NA NA NA combination_of_known_junctions TRUE canonical 23 212 415 115.516232626 4 6 0 FALSE 0 0 NA B non_coding NA NA NA NA 55 PB.11431.1 chr20 - 1722 12 novel_not_in_catalog LAT novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 689 151.561868555 143 0 0 FALSE 0 0 NA B coding 236 708 380 1087 55 PB.8333.2 chr14 + 3959 21 full-splice_match PC rna45071 3936 21 -21 -2 multi-exon FALSE canonical 14 33 46 147.763324272 2 1 0 FALSE 0 0 NA C coding 1178 3534 47 3580 15 PB.3646.5 chr5 - 2673 1 genic_intron novelGene_1955 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.8333.1 chr14 + 4000 22 novel_not_in_catalog PC novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 52 149.63956696 12 5 0 FALSE 0 0 NA C coding 1178 3534 92 3625 10 PB.946.3 chr1 - 5830 1 genic_intron novelGene_2443 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.10422.1 chr18 + 4139 15 full-splice_match DSG2 rna56310 5734 15 244 1351 multi-exon FALSE canonical 16 61 58 101.281785134 40 3 0 FALSE 0 0 NA C coding 1118 3354 14 3367 65 PB.4992.1 chr7 - 1670 7 full-splice_match RDH11 rna26934 1504 7 13 -179 multi-exon FALSE canonical 44 579 885 257.846853772 3 1 0 FALSE 0 0 NA A coding 318 954 32 985 80 PB.10422.2 chr18 + 1822 1 novel_in_catalog DSG2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.4534.2 chr7 - 3278 6 novel_not_in_catalog RAB27A novel NA NA NA NA any annotated donor/acceptor FALSE canonical 4 4 78 200.404590766 22 0 0 FALSE 0 0 NA C coding 221 663 101 763 25 PB.4534.1 chr7 - 1969 7 full-splice_match RAB27A rna24547 2808 7 44 795 multi-exon FALSE canonical 23 61 56 175.746977214 51 1 0 FALSE 0 0 NA C coding 221 663 199 861 65 PB.8271.1 chr14 - 1472 9 novel_in_catalog CTSD novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 483 88 1281.1135781 182 0 0 FALSE 0 0 NA A coding 412 1236 21 1256 5 PB.8897.35 chr14 + 6069 6 novel_not_in_catalog SORL1 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 3380 849.44334714 2 0 0 TRUE 0 0 NA C coding 238 714 601 1314 90 PB.9613.4 chr16 + 1435 6 novel_not_in_catalog WSB1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 48 1880 974 1112.38662344 5 1 0 FALSE 0 0 NA C coding 244 732 264 995 85 PB.9613.2 chr16 + 1402 1 genic WSB1 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.9613.3 chr16 + 2987 10 novel_not_in_catalog WSB1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 19 49 1151 1608.24749339 2 4 0 FALSE 0 0 NA C coding 244 732 265 996 30 PB.8426.1 chr14 - 1571 3 full-splice_match TTC9C rna45526 1915 3 325 19 multi-exon FALSE canonical 48 335 774 31.496031496 2 2 0 FALSE 0 0 NA A coding 171 513 354 866 90 PB.9613.1 chr16 + 2627 9 full-splice_match WSB1 rna52236 1859 9 71 -839 multi-exon FALSE canonical 48 1202 793 1300.59178838 79 0 0 FALSE 0 0 NA C coding 421 1263 83 1345 30 PB.6285.2 chr10 - 1661 1 genic_intron novelGene_628 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 10 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.9976.2 chr16 + 2523 18 full-splice_match NOL11 rna54058 2628 18 94 11 multi-exon FALSE non_canonical 0 0 1874 282.945224381 9 1 0 FALSE 0 0 NA C coding 623 1869 37 1905 35 PB.5058.1 chr7 - 3412 1 genic SPTLC2 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 17 10 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.6285.1 chr10 - 1697 11 incomplete-splice_match PHF20 rna34235 5919 18 44 4178 internal_fragment FALSE canonical 36 253 1362 191.418389921 30 0 0 FALSE 0 0 NA B coding 539 1617 81 1697 70 PB.5487.1 chr8 + 1821 13 full-splice_match ATP6V1C1 rna29732 1402 13 -84 -335 multi-exon FALSE canonical 47 1090 99 313.52990288 17 1 0 FALSE 0 0 NA A coding 382 1146 139 1284 15 PB.10967.1 chr19 + 2674 17 novel_in_catalog SHKBP1 novel NA NA NA NA combination_of_known_junctions TRUE canonical 13 21 2096 101.108852234 6 0 0 FALSE 0 0 NA C coding 508 1524 28 1551 20 PB.9941.1 chr16 - 1231 5 novel_not_in_catalog LIMD2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 83 603.926320009 10 8 1 FALSE 0 0 NA B coding 127 381 134 514 20 PB.9941.2 chr16 - 1326 4 novel_not_in_catalog LIMD2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 83 266.311847277 2 11 1 FALSE 0 0 NA B coding 155 465 134 598 5 PB.11251.1 chr20 + 3091 21 full-splice_match TELO2 rna60991 3329 21 231 7 multi-exon FALSE canonical 8 9 1204 40.6693988153 29 2 0 FALSE 0 0 NA A coding 837 2511 61 2571 20 PB.9941.4 chr16 - 1476 1 novel_in_catalog LIMD2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA B coding 106 318 432 749 5 PB.8150.4 chr13 - 974 4 fusion LOC701504_LOC106993053 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 408 1670.43347668 3 18 3 TRUE 0 0 NA A coding 144 432 65 496 0 PB.8150.6 chr13 - 938 5 fusion LOC701504_LOC106993051 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 373 1263.06413139 7 4 0 TRUE 0 0 NA A coding 142 426 25 450 0 PB.5689.3 chr9 - 2684 14 full-splice_match DCLRE1C rna30749 2079 14 -77 -528 multi-exon FALSE canonical 42 263 1049 81.9695065253 10 1 0 FALSE 0 0 NA C coding 692 2076 78 2153 90 PB.3806.1 chr6 + 3404 9 novel_not_in_catalog NKD2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 272 34.7419055321 5 7 0 TRUE 0 0 NA B coding 219 657 249 905 45 PB.3806.2 chr6 + 2705 10 novel_not_in_catalog NKD2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 245 34.8281495345 4 4 0 TRUE 0 0 NA B coding 476 1428 222 1649 25 PB.5591.1 chr8 + 1120 4 full-splice_match LY6E rna30203 1181 4 57 4 multi-exon FALSE canonical 38 249 58 818.815608058 42 1 0 FALSE 0 0 NA C coding 131 393 110 502 15 PB.7851.1 chr13 + 3176 2 full-splice_match FAM84A rna42581 3569 2 23 370 multi-exon FALSE canonical 18 131 195 NA 34 1 0 FALSE 0 0 NA A coding 292 876 232 1107 25 PB.11382.1 chr20 - 1616 6 full-splice_match GDE1 rna61618 1715 6 -140 239 multi-exon FALSE canonical 45 488 422 536.140839705 24 0 0 FALSE 0 0 NA A coding 331 993 162 1154 60 PB.1956.9 chr2 + 1579 1 intergenic novelGene_2623 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.9807.4 chr16 + 2482 1 genic_intron novelGene_952 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A coding 119 357 879 1235 85 PB.10302.1 chr17 - 3941 1 full-splice_match KCTD12 rna55559 6094 1 2145 8 mono-exon FALSE canonical NA NA NA NA 34 9 NA FALSE 0 0 NA C non_coding NA NA NA NA 40 PB.5667.22 chr9 + 752 1 incomplete-splice_match CELF2 rna30649 7618 14 3135 3732 mono-exon FALSE canonical NA NA NA NA 6 0 NA FALSE 0 0 NA B non_coding NA NA NA NA 70 PB.8054.11 chr13 + 1681 1 incomplete-splice_match ACTR2 rna43648 4288 10 2599 9 mono-exon FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.9926.3 chr16 + 1670 1 genic_intron novelGene_1123 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.9926.2 chr16 + 3580 27 novel_not_in_catalog BCAS3 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 646 320.09529831 2 7 0 TRUE 0 0 NA A coding 901 2703 74 2776 15 PB.4693.1 chr7 + 1381 1 full-splice_match MESDC1 rna25369 3403 1 1656 366 mono-exon FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A coding 188 564 176 739 25 PB.3094.1 chr4 - 3157 1 incomplete-splice_match TMEM181 rna16948 5367 19 2208 3 mono-exon FALSE canonical NA NA NA NA 2 16 NA FALSE 0 0 NA A non_coding NA NA NA NA 15 PB.7721.1 chr12 - 1851 16 novel_not_in_catalog FARSB novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 746 264.811253537 14 2 0 TRUE 0 0 NA A coding 317 951 786 1736 25 PB.1177.3 chr1 + 2880 3 novel_in_catalog MTR novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 611 889 232.499462365 2 3 0 FALSE 0 0 NA C coding 138 414 673 1086 75 PB.4800.8 chr7 - 2950 9 novel_not_in_catalog HNRNPC novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1721 6139.42774206 6 3 0 FALSE 0 0 NA C coding 171 513 1771 2283 45 PB.11419.2 chr20 + 4219 8 full-splice_match KDM8 rna61777 3314 8 849 -1754 multi-exon FALSE canonical 21 29 133 25.2982212813 2 9 0 FALSE 0 0 NA A coding 416 1248 165 1412 20 PB.947.1 chr1 + 1991 15 full-splice_match EIF2D rna5177 1943 15 32 -80 multi-exon FALSE canonical 46 1030 439 180.313615681 15 0 0 FALSE 0 0 NA C coding 584 1752 109 1860 25 PB.947.2 chr1 + 1650 13 novel_in_catalog EIF2D novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 1030 457 170.651692051 4 0 0 FALSE 0 0 NA C coding 508 1524 127 1650 30 PB.5555.1 chr8 + 2371 3 full-splice_match MYC rna30012 2422 3 46 5 multi-exon FALSE canonical 44 325 1328 39 2 2 0 FALSE 0 0 NA A coding 439 1317 572 1888 15 PB.8478.1 chr14 - 3230 1 incomplete-splice_match ZFP91 rna45772 5200 11 1965 6 mono-exon FALSE canonical NA NA NA NA 17 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 15 PB.4740.1 chr7 + 2818 1 genic_intron novelGene_1366 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.9902.1 chr16 - 1555 1 intergenic novelGene_1036 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.240.3 chr1 - 3636 1 genic SRSF4 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.4086.1 chr6 + 2942 1 genic_intron novelGene_1959 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11405.1 chr20 + 3004 6 full-splice_match DCTN5 rna61734 3160 6 154 2 multi-exon FALSE canonical 48 1200 277 235.412404091 34 0 0 FALSE 0 0 NA A coding 182 546 42 587 10 PB.7008.1 chr11 + 2681 24 novel_not_in_catalog DGKA novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 496 226.190185463 62 2 0 FALSE 0 0 NA B coding 593 1779 649 2427 35 PB.5172.198 chr7 + 1565 8 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 376 3335.83752602 2 22 0 TRUE 0 0 NA B coding 196 588 843 1430 15 PB.5172.199 chr7 + 1508 10 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 233 2715.18360337 2 18 0 TRUE 0 0 NA B coding 196 588 785 1372 15 PB.5172.196 chr7 + 1566 9 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 225 3497.68666407 2 13 0 TRUE 0 0 NA B coding 196 588 844 1431 15 PB.8583.4 chr14 - 3305 1 novel_in_catalog HTATIP2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 7 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.11696.3 chr20 - 1815 4 full-splice_match COTL1 rna62971 1746 4 -38 -31 multi-exon FALSE canonical 33 261 230 192.717409696 302 1 0 FALSE 0 0 NA C coding 142 426 154 579 30 PB.8265.1 chr14 - 1374 13 full-splice_match CHID1 rna44708 2978 13 48 1556 multi-exon FALSE canonical 41 276 801 247.927408731 9 0 0 FALSE 0 0 NA A coding 393 1179 101 1279 10 PB.2071.1 chr3 + 3068 7 full-splice_match ATP5O rna11048 740 7 21 -2349 multi-exon FALSE canonical 47 7388 44 2441.24742703 11 5 0 FALSE 0 0 NA C coding 213 639 9 647 25 PB.788.4 chr1 - 2680 4 full-splice_match ISG20L2 rna4349 2695 4 7 8 multi-exon FALSE canonical 15 20 78 146.177973717 4 2 0 FALSE 0 0 NA C coding 354 1062 196 1257 35 PB.8583.3 chr14 - 1324 6 full-splice_match HTATIP2 rna46505 1363 6 23 16 multi-exon FALSE canonical 32 98 36 408.870395113 2 0 0 FALSE 0 0 NA C coding 242 726 38 763 35 PB.2071.2 chr3 + 3777 1 novel_in_catalog ATP5O novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA C coding 127 381 53 433 95 PB.7275.4 chr11 + 6558 16 full-splice_match OAS3 rna39415 6843 16 280 5 multi-exon FALSE canonical 25 73 218 99.3830971544 76 2 0 FALSE 0 0 NA C coding 1087 3261 42 3302 20 PB.5171.4 chr7 + 1405 7 novel_in_catalog C7H14orf80 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 7 7 273 83.7675354777 17 0 0 FALSE 0 0 NA C coding 270 810 313 1122 5 PB.7275.7 chr11 + 6057 14 novel_in_catalog OAS3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 26 112 2645 88.5268320906 3 9 0 FALSE 0 0 NA C coding 755 2265 538 2802 25 PB.7711.1 chr12 + 1403 8 full-splice_match STK16 rna41720 2860 8 22 1435 multi-exon FALSE canonical 34 189 41 210.881483303 10 0 0 FALSE 0 0 NA A coding 305 915 146 1060 15 PB.5171.3 chr7 + 3087 8 full-splice_match C7H14orf80 rna28055 1827 8 187 -1447 multi-exon FALSE canonical 19 30 195 72.4775827411 32 3 0 FALSE 0 0 NA C coding 424 1272 55 1326 25 PB.7275.3 chr11 + 2757 1 novel_in_catalog OAS3 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 4 NA FALSE 0 0 NA C coding 82 246 100 345 75 PB.6211.1 chr10 + 3139 2 full-splice_match TP53RK rna33865 3311 2 166 6 multi-exon FALSE canonical 33 72 315 NA 9 5 0 FALSE 0 0 NA A coding 253 759 33 791 25 PB.2694.1 chr4 + 4440 15 full-splice_match PRPF4B rna14508 8270 15 739 3091 multi-exon FALSE canonical 44 1000 2438 406.300381491 3 1 0 FALSE 0 0 NA A coding 1007 3021 127 3147 25 PB.2694.2 chr4 + 1666 1 genic_intron novelGene_119 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 12 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.3794.1 chr5 - 1541 12 full-splice_match UFSP2 rna20665 1619 12 70 8 multi-exon FALSE canonical 32 167 64 179.131236807 14 1 0 FALSE 0 0 NA A coding 469 1407 62 1468 25 PB.11050.2 chr19 + 3056 1 genic_intron novelGene_892 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.481.3 chr1 - 2786 1 genic_intron novelGene_1527 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.12200.1 chrUn_NW_014990369v1 + 1791 14 intergenic novelGene_39 novel NA NA NA NA no_subcategory FALSE canonical 17 23 107 153.925306561 3 1 0 FALSE 0 0 NA B coding 385 1155 24 1178 15 PB.674.1 chr1 + 2774 1 genic LIX1L novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A coding 184 552 1282 1833 25 PB.5143.1 chr7 - 3818 2 genic_intron novelGene_2484 novel NA NA NA NA no_subcategory TRUE canonical 31 194 3145 NA 2 12 0 FALSE 0 0 NA A coding 100 300 3246 3545 55 PB.7012.3 chr11 + 1484 14 full-splice_match PA2G4 rna38167 2524 14 245 795 multi-exon FALSE canonical 39 251 1355 751.207694316 5 6 0 FALSE 0 0 NA C coding 394 1182 170 1351 70 PB.7012.2 chr11 + 1546 13 novel_in_catalog PA2G4 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1439 1075 562.837454333 46 0 0 FALSE 0 0 NA C coding 394 1182 139 1320 70 PB.7012.1 chr11 + 1227 12 incomplete-splice_match PA2G4 rna38167 2524 14 276 1021 3prime_fragment FALSE canonical 48 1439 1075 558.888182019 12 0 0 FALSE 0 0 NA C coding 363 1089 139 1227 65 PB.3627.2 chr5 + 3149 8 novel_not_in_catalog PPA2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 10 11 710 732.782368784 2 12 0 FALSE 0 0 NA C coding 221 663 56 718 85 PB.7764.1 chr12 + 6199 30 full-splice_match DGKD rna42050 6214 30 12 3 multi-exon FALSE canonical 32 106 3547 163.572613845 21 6 0 FALSE 0 0 NA C coding 1156 3468 167 3634 15 PB.10028.6 chr16 - 5576 1 genic_intron novelGene_1381 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 8 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.9954.2 chr16 + 3162 10 novel_not_in_catalog MILR1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 4 5 1132 230.199913119 2 6 0 FALSE 0 0 NA C coding 343 1029 73 1101 40 PB.8909.2 chr14 + 1475 1 novel_in_catalog TBRG1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 7 0 NA FALSE 0 0 NA C coding 123 369 216 584 90 PB.8909.1 chr14 + 1630 9 full-splice_match TBRG1 rna48381 1676 9 33 13 multi-exon FALSE canonical 35 151 658 120.805629008 11 0 0 FALSE 0 0 NA C coding 411 1233 205 1437 20 PB.9954.1 chr16 + 1778 10 full-splice_match MILR1 rna53985 1845 10 63 4 multi-exon TRUE canonical 29 138 1122 196.211620451 8 0 0 FALSE 0 0 NA C coding 343 1029 63 1091 20 PB.8744.1 chr14 + 1513 5 incomplete-splice_match PCF11 rna47441 6027 16 189 4325 3prime_fragment FALSE canonical 48 492 449 298.192890593 4 1 0 FALSE 0 0 NA C coding 418 1254 258 1511 60 PB.9954.4 chr16 + 1727 10 full-splice_match MILR1 rna53986 1805 10 74 4 multi-exon FALSE canonical 34 189 1111 184.038039546 4 0 0 FALSE 0 0 NA C coding 343 1029 52 1080 20 PB.7231.9 chr11 - 2250 2 full-splice_match SELPLG rna39211 2326 2 60 16 multi-exon FALSE canonical 41 461 155 NA 146 0 0 FALSE 0 0 NA C coding 432 1296 161 1456 45 PB.7956.1 chr13 - 1368 1 full-splice_match LOC100425937 rna43179 1754 1 377 9 mono-exon FALSE canonical NA NA NA NA 82 1 NA FALSE 0 0 NA C coding 187 561 521 1081 70 PB.2241.1 chr3 + 1517 1 novel_in_catalog COA1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.4806.29 chr7 + 1402 7 fusion LOC710951_LOC106999340 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 373 551.587708347 2 4 0 TRUE 0 0 NA B coding 110 330 524 853 20 PB.654.1 chr1 + 3483 27 full-splice_match WDR3 rna3506 3573 27 16 74 multi-exon FALSE canonical 36 192 12 290.693997186 10 0 0 FALSE 0 0 NA C coding 943 2829 45 2873 55 PB.3776.1 chr5 - 1244 9 full-splice_match AGA rna20571 2102 9 61 797 multi-exon FALSE canonical 44 899 189 607.480863896 3 0 0 FALSE 0 0 NA A coding 346 1038 63 1100 25 PB.957.3 chr1 + 1940 1 genic_intron novelGene_2458 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 8 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.957.2 chr1 + 3279 6 novel_in_catalog NUAK2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 0 0 807 49.244289009 4 18 0 FALSE 0 0 NA C coding 344 1032 837 1868 5 PB.4806.26 chr7 + 1369 7 fusion LOC710951_LOC711223 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 344 565.042476279 2 1 0 TRUE 0 0 NA A coding 110 330 498 827 30 PB.4806.27 chr7 + 1466 7 fusion LOC710951_LOC106999340 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 440 554.726058519 2 5 0 TRUE 0 0 NA B coding 110 330 594 923 30 PB.4806.20 chr7 + 1436 7 fusion LOC710981_LOC710951 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 409 559.878558261 2 4 0 TRUE 0 0 NA B coding 129 387 73 459 30 PB.4806.21 chr7 + 1434 7 fusion LOC710981_LOC710951 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 407 557.996415759 2 3 0 TRUE 0 0 NA B coding 135 405 72 476 20 PB.4806.22 chr7 + 1420 7 fusion LOC710981_LOC710951 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 389 563.730432033 2 3 0 TRUE 0 0 NA B coding 136 408 53 460 15 PB.3473.20 chr5 + 3946 25 novel_in_catalog SEC31A novel NA NA NA NA combination_of_known_junctions FALSE canonical 18 84 2803 676.725202723 2 0 0 FALSE 0 0 NA C coding 1137 3411 124 3534 20 PB.1917.1 chr2 + 6367 37 novel_in_catalog CLASP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 42 327 439 738.243862149 4 3 0 FALSE 0 0 NA B coding 1492 4476 245 4720 50 PB.10842.1 chr19 - 1405 9 novel_in_catalog MEF2B novel NA NA NA NA combination_of_known_junctions TRUE canonical 0 0 967 19.1572440607 3 9 1 FALSE 0 0 NA A coding 333 999 89 1087 20 PB.4486.6 chr7 + 1962 1 incomplete-splice_match CASC4 rna24312 3917 9 1951 5 mono-exon FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 10 PB.4486.1 chr7 + 3764 10 novel_not_in_catalog CASC4 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 103 1441.86025675 2 5 1 TRUE 0 0 NA B coding 381 1143 255 1397 10 PB.7259.1 chr11 - 3020 3 full-splice_match FAM109A rna39343 3104 3 76 8 multi-exon FALSE canonical 12 15 279 0 18 2 0 FALSE 0 0 NA A coding 235 705 316 1020 30 PB.623.1 chr1 - 1060 5 full-splice_match RHOC rna3372 1320 5 253 7 multi-exon FALSE canonical 39 899 56 514.464770417 7 0 0 FALSE 0 0 NA A coding 193 579 64 642 15 PB.4486.2 chr17 - 3895 5 genic LOC721289 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 3192 0 7 31 0 TRUE 0 0 NA A coding 317 951 618 1568 65 PB.5038.1 chr7 - 3601 11 incomplete-splice_match MLH3 rna27190 4711 12 1106 4 5prime_fragment FALSE canonical 34 197 2660 45.3651848889 2 5 0 FALSE 0 0 NA A coding 1078 3234 71 3304 5 PB.5385.4 chr8 - 3379 1 intergenic novelGene_1313 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 16 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.8747.1 chr14 + 2129 2 genic_intron novelGene_1521 novel NA NA NA NA no_subcategory FALSE canonical 16 37 107 NA 17 5 0 FALSE 0 0 NA A coding 100 300 1237 1536 0 PB.1200.3 chr1 - 2866 14 novel_not_in_catalog HNRNPU novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 21 2721.94875044 2 0 0 FALSE 0 0 NA C coding 488 1464 342 1805 10 PB.2291.5 chr3 - 3333 7 full-splice_match CREB5 rna12267 8018 7 252 4433 multi-exon FALSE canonical 20 41 627 64.3506021728 5 0 0 FALSE 0 0 NA C coding 369 1107 19 1125 90 PB.2135.1 chr3 + 2894 1 genic_intron novelGene_807 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA A coding 174 522 195 716 90 PB.2365.4 chr3 - 2578 16 novel_not_in_catalog CD36 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 37 2272.26758988 3 2 2 TRUE 0 0 NA C coding 472 1416 283 1698 15 PB.2365.1 chr3 - 2561 15 full-splice_match CD36 rna12772 2796 15 208 27 multi-exon FALSE canonical 23 1585 102 1444.32925609 34 0 0 FALSE 0 0 NA C coding 472 1416 286 1701 45 PB.250.5 chr1 - 1891 7 novel_not_in_catalog PTP4A2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 82 2780.53394153 2 4 0 TRUE 0 0 NA B coding 167 501 780 1280 85 PB.2365.3 chr3 - 2527 15 full-splice_match CD36 rna12764 2709 15 177 5 multi-exon FALSE canonical 20 593 46 1670.15119076 5 0 0 FALSE 0 0 NA C coding 472 1416 230 1645 15 PB.2365.2 chr3 - 2576 15 full-splice_match CD36 rna12767 2621 15 40 5 multi-exon FALSE canonical 21 1997 95 1353.64323217 2 2 0 FALSE 0 0 NA C coding 472 1416 279 1694 15 PB.7813.1 chr12 + 2543 10 full-splice_match D2HGDH rna42328 2600 10 48 9 multi-exon FALSE canonical 3 3 66 100.71246199 2 0 0 FALSE 0 0 NA A coding 529 1587 160 1746 15 PB.2372.1 chr3 - 3167 18 full-splice_match PTPN12 rna12802 3491 18 322 2 multi-exon FALSE canonical 43 244 133 160.502336432 2 1 0 FALSE 0 0 NA C coding 780 2340 35 2374 5 PB.2224.9 chr3 - 2569 3 novel_in_catalog CCM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 189 101 623.499799519 3 0 0 FALSE 0 0 NA C coding 133 399 6 404 75 PB.341.1 chr1 + 3864 23 full-splice_match TIE1 rna1814 4169 23 300 5 multi-exon FALSE canonical 19 69 1991 124.346290656 29 2 0 FALSE 0 0 NA A coding 1138 3414 65 3478 15 PB.4455.1 chr7 - 2866 6 full-splice_match EHD4 rna24169 1848 6 5 -1023 multi-exon FALSE canonical 43 395 574 158.379291576 79 0 0 FALSE 0 0 NA A coding 541 1623 64 1686 15 PB.2224.4 chr3 - 2634 1 novel_in_catalog CCM2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA C coding 135 405 359 763 90 PB.6104.2 chr9 + 1754 5 novel_in_catalog BCCIP novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1600 180 447.398033076 2 2 0 FALSE 0 0 NA C coding 200 600 16 615 90 PB.2224.6 chr3 - 2741 4 novel_in_catalog CCM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 540 99 376.042550784 8 1 0 FALSE 0 0 NA C coding 191 573 4 576 75 PB.8396.1 chr14 + 2864 5 full-splice_match EHD1 rna45323 3308 5 440 4 multi-exon FALSE canonical 44 441 56 116.760438506 180 6 0 FALSE 0 0 NA C coding 398 1194 61 1254 10 PB.8396.3 chr14 + 5696 4 novel_not_in_catalog EHD1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 2985 341.710403705 2 27 0 FALSE 0 0 NA C coding 298 894 3192 4085 10 PB.8396.2 chr14 + 2623 3 novel_in_catalog EHD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 441 413 86.4985549012 5 4 0 FALSE 0 0 NA C coding 367 1101 10 1110 55 PB.5580.2 chr8 - 3843 29 fusion LOC711466_LOC699757 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 2960 202.645009808 2 39 0 TRUE 0 0 NA B coding 592 1776 126 1901 0 PB.2372.2 chr3 - 3121 18 full-splice_match PTPN12 rna12803 3152 18 28 3 multi-exon FALSE canonical 20 44 88 183.717173939 4 18 1 FALSE 0 0 NA C coding 661 1983 347 2329 5 PB.12200.2 chrUn_NW_014990369v1 + 1870 14 intergenic novelGene_39 novel NA NA NA NA no_subcategory FALSE canonical 0 0 1484 173.554026171 2 1 0 FALSE 0 0 NA B coding 385 1155 19 1173 70 PB.5813.1 chr9 - 5968 1 genic_intron novelGene_1176 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 13 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.8065.1 chr13 + 1407 9 full-splice_match PLEK rna43684 2915 9 442 1066 multi-exon FALSE canonical 35 472 73 90.9505360072 307 0 0 FALSE 0 0 NA C coding 350 1050 32 1081 70 PB.8065.2 chr13 + 3160 8 novel_in_catalog PLEK novel NA NA NA NA combination_of_known_junctions FALSE canonical 35 472 112 96.0780932367 2 1 0 FALSE 0 0 NA C coding 229 687 71 757 90 PB.8065.3 chr13 + 6122 5 novel_in_catalog PLEK novel NA NA NA NA combination_of_known_junctions FALSE canonical 35 472 63 106.146125695 4 2 0 FALSE 0 0 NA C coding 229 687 22 708 90 PB.373.2 chr1 - 1541 3 novel_in_catalog IPP novel NA NA NA NA combination_of_known_junctions FALSE canonical 25 45 46 156.499201276 2 4 0 FALSE 0 0 NA C coding 251 753 97 849 80 PB.373.1 chr1 - 2897 9 full-splice_match IPP rna1982 2824 9 20 -93 multi-exon FALSE canonical 25 45 24 144.540651721 4 5 0 FALSE 0 0 NA C coding 584 1752 75 1826 70 PB.8065.7 chr13 + 1557 1 genic PLEK novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 15 PB.6563.1 chr10 - 5841 1 genic APOL2 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 3 17 NA FALSE 0 0 NA A coding 270 810 4174 4983 0 PB.4178.2 chr6 + 1476 4 full-splice_match PAIP2 rna22643 1499 4 20 3 multi-exon FALSE canonical 48 2719 126 1976.01163964 155 0 0 FALSE 0 0 NA C coding 124 372 153 524 20 PB.4178.1 chr6 + 1493 5 novel_not_in_catalog PAIP2 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 25 2936.97242071 3 1 0 TRUE 0 0 NA C coding 124 372 170 541 20 PB.7839.1 chr13 - 1545 6 full-splice_match YWHAQ rna42499 2248 6 68 635 multi-exon FALSE canonical 27 83 57 2396.52060287 80 0 0 FALSE 0 0 NA A coding 245 735 140 874 5 PB.5794.1 chr9 + 2350 15 full-splice_match ANXA11 rna31567 2492 15 132 10 multi-exon FALSE canonical 31 189 172 720.587954382 43 3 0 FALSE 0 0 NA C coding 506 1518 118 1635 15 PB.10745.1 chr19 + 1489 1 full-splice_match JUNB rna57998 1842 1 348 5 mono-exon FALSE canonical NA NA NA NA 89 1 NA FALSE 0 0 NA A coding 199 597 398 994 15 PB.9588.1 chr16 - 1311 8 full-splice_match ATPAF2 rna52122 1395 8 -8 92 multi-exon FALSE canonical 45 272 893 129.919205663 6 0 0 FALSE 0 0 NA A coding 289 867 162 1028 20 PB.749.12 chr1 - 6346 16 novel_not_in_catalog ADAR novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 5975 489.747894329 3 6 0 TRUE 0 0 NA C coding 1225 3675 184 3858 35 PB.5794.3 chr9 + 2497 16 novel_not_in_catalog ANXA11 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 139 793.355531902 2 1 0 FALSE 0 0 NA C coding 506 1518 265 1782 15 PB.2401.1 chr3 + 1636 1 novel_in_catalog TRRAP novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.2551.1 chr3 + 1470 1 genic_intron novelGene_2402 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.6432.1 chr10 - 3135 4 fusion ZNF337_LOC716744 novel NA NA NA NA no_subcategory FALSE canonical 27 71 329 93.1826164046 2 8 0 FALSE 0 0 NA A coding 726 2178 155 2332 25 PB.4053.1 chr6 + 5823 1 genic_intron novelGene_1793 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.569.1 chr1 - 2832 10 novel_in_catalog VAV3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 36 438 528 269.421602697 72 4 0 FALSE 0 0 NA A coding 287 861 77 937 10 PB.7833.1 chr13 - 2767 1 intergenic novelGene_163 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A coding 138 414 2133 2546 80 PB.4158.1 chr6 + 1648 5 full-splice_match TXNDC15 rna22498 2545 5 768 129 multi-exon FALSE canonical 42 261 146 340.138207204 22 0 0 FALSE 0 0 NA C coding 348 1044 80 1123 15 PB.10028.2 chr16 - 1306 6 full-splice_match GRB2 rna54262 3308 6 60 1942 multi-exon FALSE canonical 41 229 165 785.659595499 237 0 0 FALSE 0 0 NA C coding 217 651 303 953 30 PB.6710.1 chr11 + 6262 1 genic_intron novelGene_66 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.3901.1 chr6 + 5953 1 genic_intron novelGene_1016 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A coding 116 348 2083 2430 85 PB.2428.1 chr3 + 2635 13 full-splice_match AGFG2 rna13136 2732 13 86 11 multi-exon FALSE canonical 23 48 993 116.995726418 4 6 0 FALSE 0 0 NA A coding 490 1470 84 1553 40 PB.6793.1 chr11 - 1645 1 novel_in_catalog NKG2D novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.2559.2 chr3 - 5808 8 full-splice_match PODXL rna13781 5820 8 2 10 multi-exon FALSE canonical 13 58 317 132.597134207 5 7 0 FALSE 0 0 NA C coding 522 1566 248 1813 25 PB.428.1 chr1 - 2741 1 novel_in_catalog USP24 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA B non_coding NA NA NA NA 50 PB.2559.1 chr3 - 3484 1 incomplete-splice_match PODXL rna13781 5820 8 2325 12 mono-exon FALSE canonical NA NA NA NA 6 8 NA FALSE 0 0 NA C non_coding NA NA NA NA 25 PB.3999.8 chr6 + 2955 1 genic_intron novelGene_1515 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.7725.1 chr12 - 1773 9 full-splice_match SERPINE2 rna41821 2457 9 321 363 multi-exon FALSE canonical 38 231 186 473.603209449 15 11 0 FALSE 0 0 NA A coding 397 1191 209 1399 60 PB.481.2 chr1 - 4292 24 novel_not_in_catalog USP33 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1803 444.794334496 4 4 0 TRUE 0 0 NA C coding 526 1578 241 1818 40 PB.971.1 chr1 - 2569 5 full-splice_match LAX1 rna5354 2112 5 65 -522 multi-exon FALSE canonical 19 45 465 26.5141471671 5 0 0 FALSE 0 0 NA A coding 398 1194 377 1570 90 PB.6856.3 chr11 - 3184 1 genic_intron novelGene_626 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A coding 105 315 1205 1519 95 PB.8503.1 chr14 + 1309 1 incomplete-splice_match CELF1 rna45952 4974 14 3009 657 mono-exon FALSE canonical NA NA NA NA 5 0 NA FALSE 0 0 NA B coding 109 327 845 1171 70 PB.6408.1 chr10 + 3433 11 novel_not_in_catalog PET117 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 37 181 2488 149.006711258 29 2 0 TRUE 0 0 NA B coding 781 2343 508 2850 15 PB.6408.2 chr10 + 1600 2 novel_not_in_catalog PET117 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 30 98 644 NA 2 0 0 FALSE 0 0 NA B coding 100 300 1102 1401 35 PB.9056.1 chr15 + 1637 9 full-splice_match WDR34 rna49190 1820 9 159 24 multi-exon FALSE canonical 22 39 772 210.689344771 5 0 0 FALSE 0 0 NA A coding 419 1257 311 1567 45 PB.5160.1 chr7 - 3061 7 incomplete-splice_match PPP1R13B rna27989 4853 17 1762 30 5prime_fragment FALSE canonical 23 100 235 39.9499687109 9 7 0 FALSE 0 0 NA A coding 509 1527 157 1683 35 PB.7026.2 chr11 - 2790 7 novel_in_catalog ATP5B novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 2145 151 7398.47470767 7 0 0 FALSE 0 0 NA C coding 258 774 1872 2645 20 PB.11939.2 chrX + 7162 21 novel_in_catalog OGT novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 3063 5439 907.26291669 4 1 0 FALSE 0 0 NA C coding 665 1995 4606 6600 20 PB.11939.1 chrX + 3897 22 full-splice_match OGT rna64291 5500 22 37 1566 multi-exon FALSE canonical 48 1413 727 1074.04096756 8 0 0 FALSE 0 0 NA C coding 1046 3138 197 3334 20 PB.7026.1 chr11 - 1786 10 full-splice_match ATP5B rna38260 1749 10 -46 9 multi-exon FALSE canonical 48 2145 184 6322.40381501 392 2 0 FALSE 0 0 NA C coding 529 1587 58 1644 20 PB.1519.2 chr2 - 3093 10 novel_not_in_catalog ALAS1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 99 465.09031381 16 0 0 FALSE 0 0 NA C coding 388 1164 1823 2986 45 PB.6239.1 chr10 + 1800 10 full-splice_match SERINC3 rna34027 2605 10 125 680 multi-exon FALSE canonical 48 1550 40 585.854077395 69 0 0 FALSE 0 0 NA A coding 473 1419 2 1420 90 PB.3683.2 chr5 + 4044 20 full-splice_match NAA15 rna20078 5340 20 -37 1333 multi-exon FALSE canonical 43 307 274 230.325856126 3 1 0 FALSE 0 0 NA C coding 866 2598 221 2818 45 PB.1519.5 chr2 - 3428 1 novel_in_catalog ALAS1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.1372.1 chr2 + 2168 6 full-splice_match RAB7A rna7343 2209 6 35 6 multi-exon FALSE canonical 40 318 177 424.976469937 55 1 0 FALSE 0 0 NA C coding 207 621 186 806 20 PB.6892.2 chr11 - 3375 8 novel_not_in_catalog PRICKLE1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 297 92.5634917232 4 3 0 FALSE 0 0 NA A coding 831 2493 343 2835 80 PB.1372.3 chr2 + 3100 1 genic_intron novelGene_1024 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 15 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.1815.1 chr2 - 2689 8 full-splice_match MOB4 rna9669 2719 8 -10 40 multi-exon FALSE canonical 42 908 98 341.013196226 38 1 0 FALSE 0 0 NA A coding 225 675 39 713 55 PB.1563.1 chr2 + 3020 10 full-splice_match QRICH1 rna8436 3553 10 312 221 multi-exon FALSE canonical 40 147 137 288.617393793 38 2 0 FALSE 0 0 NA A coding 777 2331 159 2489 35 PB.4012.1 chr6 - 2775 1 intergenic novelGene_1558 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 41 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.7488.1 chr12 - 3062 1 genic_intron novelGene_773 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.4878.2 chr7 + 2941 25 full-splice_match CTAGE5 rna26422 3144 25 475 -272 multi-exon FALSE canonical 11 68 452 630.740041539 7 0 0 FALSE 0 0 NA C coding 811 2433 75 2507 35 PB.4186.1 chr6 + 2932 1 genic_intron novelGene_2260 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.1011.17 chr1 - 2980 18 novel_not_in_catalog PTPRC novel NA NA NA NA any annotated donor/acceptor FALSE canonical 13 28 85 1705.99003514 2 3 0 FALSE 0 0 NA C coding 679 2037 138 2174 60 PB.6518.2 chr10 + 5834 19 full-splice_match MTMR3 rna35598 8848 19 18 2996 multi-exon FALSE canonical 32 118 3538 335.049250111 4 3 0 FALSE 0 0 NA C coding 1161 3483 314 3796 25 PB.8960.1 chr15 - 1556 4 full-splice_match TUBB4B rna48704 1807 4 247 4 multi-exon FALSE canonical 45 282 235 1127.89050887 84 2 0 FALSE 0 0 NA A coding 445 1335 70 1404 5 PB.4225.1 chr6 + 962 8 full-splice_match NDFIP1 rna22847 2610 8 310 1338 multi-exon FALSE canonical 45 1297 220 1454.89140488 85 1 0 FALSE 0 0 NA A coding 221 663 158 820 15 PB.276.2 chr1 - 3260 4 incomplete-splice_match SFPQ rna1442 5678 13 2410 8 5prime_fragment FALSE canonical 41 190 3040 831.452945151 6 1 0 FALSE 0 0 NA B non_coding NA NA NA NA 20 PB.979.1 chr1 + 1652 11 full-splice_match CHIT1 rna5377 2304 11 61 591 multi-exon FALSE canonical 18 413 59 199.50187969 13 1 0 FALSE 0 0 NA A coding 466 1398 35 1432 25 PB.3252.1 chr4 - 3395 9 full-splice_match AMD1 rna17683 3410 9 8 7 multi-exon FALSE canonical 48 1898 791 298.75910028 38 1 0 FALSE 0 0 NA A coding 334 1002 322 1323 20 PB.3611.2 chr5 - 1680 8 full-splice_match DNAJB14 rna19515 6057 8 112 4265 multi-exon FALSE canonical 46 299 171 418.887813143 22 0 0 FALSE 0 0 NA C coding 379 1137 39 1175 65 PB.9840.1 chr16 + 667 4 full-splice_match EIF1 rna53386 1398 4 91 640 multi-exon FALSE canonical 46 1747 177 1242.21576226 143 0 0 FALSE 0 0 NA C coding 113 339 147 485 20 PB.9840.2 chr16 + 2591 2 novel_in_catalog EIF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 3076 1050 NA 6 2 0 FALSE 0 0 NA C coding 91 273 148 420 35 PB.9840.3 chr16 + 2006 3 novel_in_catalog EIF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 3076 1049 853 13 4 1 FALSE 0 0 NA C non_coding NA NA NA NA 35 PB.9840.4 chr16 + 2742 1 novel_in_catalog EIF1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 33 3 NA FALSE 0 0 NA C coding 91 273 147 419 40 PB.9840.5 chr16 + 1883 3 novel_in_catalog EIF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 1747 176 664.499811889 2 0 0 FALSE 0 0 NA C coding 105 315 146 460 40 PB.6694.10 chr10 + 1737 9 novel_in_catalog TRABD novel NA NA NA NA combination_of_known_junctions FALSE canonical 19 34 1260 64.4748012793 3 1 0 FALSE 0 0 NA C coding 376 1128 417 1544 15 PB.3611.5 chr5 - 3503 1 novel_in_catalog DNAJB14 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA C non_coding NA NA NA NA 65 PB.10644.2 chr19 - 3877 8 incomplete-splice_match MLLT1 rna57491 4360 12 472 11 5prime_fragment FALSE canonical 18 40 950 34.6121365998 9 1 0 FALSE 0 0 NA A coding 398 1194 27 1220 35 PB.10312.1 chr17 + 2538 8 full-splice_match NDFIP2 rna55637 5089 8 575 1976 multi-exon FALSE canonical 34 641 246 267.988805736 8 4 0 FALSE 0 0 NA A coding 242 726 208 933 25 PB.5172.150 chr7 + 1923 9 fusion LOC711872_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 227 3186.10718589 3 5 0 TRUE 0 0 NA B coding 574 1722 80 1801 35 PB.9409.1 chr15 + 5705 26 full-splice_match DAPK1 rna51128 5775 26 64 6 multi-exon FALSE canonical 25 94 28 177.893226403 18 1 0 FALSE 0 0 NA C coding 1430 4290 137 4426 15 PB.9409.3 chr15 + 5901 25 novel_in_catalog DAPK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 285 3056 156.441682425 9 1 0 FALSE 0 0 NA C coding 1430 4290 307 4596 30 PB.9409.2 chr15 + 5928 26 full-splice_match DAPK1 rna51129 5711 26 -217 0 multi-exon FALSE canonical 28 93 249 177.994381934 21 1 0 FALSE 0 0 NA C coding 1430 4290 358 4647 15 PB.2210.1 chr3 + 1913 14 full-splice_match CCT6A rna11818 2716 14 199 604 multi-exon FALSE canonical 48 2254 149 734.142356767 95 0 0 FALSE 0 0 NA C coding 531 1593 13 1605 45 PB.2210.3 chr3 + 3055 12 novel_in_catalog CCT6A novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 2254 176 794.961634294 2 7 0 FALSE 0 0 NA C coding 490 1470 40 1509 45 PB.1169.1 chr1 + 2888 12 novel_in_catalog TBCE novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 27 161 181 392.653791526 2 1 0 FALSE 0 0 NA B coding 178 534 1550 2083 70 PB.2210.5 chr3 + 1779 9 novel_not_in_catalog CCT6A novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1752 1289.19820043 2 0 0 TRUE 0 0 NA C coding 211 633 211 843 45 PB.11910.1 chrX - 1928 11 novel_not_in_catalog ALAS2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 32 4248.59776868 1096 0 0 FALSE 0 0 NA B coding 587 1761 48 1808 15 PB.10627.6 chr19 + 5536 1 genic_intron novelGene_131 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA A coding 126 378 3708 4085 80 PB.4943.1 chr7 + 1561 13 full-splice_match ACTR10 rna26686 1616 13 54 1 multi-exon FALSE non_canonical 0 0 507 618.886096144 46 1 0 FALSE 0 0 NA A coding 417 1251 58 1308 15 PB.5598.3 chr8 - 1721 13 novel_not_in_catalog NAPRT novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 228 145.832095233 2 0 0 FALSE 0 0 NA C coding 371 1113 504 1616 10 PB.1264.11 chr2 - 2878 1 genic_intron novelGene_649 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.1386.1 chr2 - 2974 1 incomplete-splice_match NR2C2 rna7415 8271 16 5293 5 mono-exon FALSE canonical NA NA NA NA 7 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.5171.5 chr7 + 7125 4 novel_not_in_catalog C7H14orf80 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 406 12.8062484749 2 19 0 TRUE 0 0 NA C coding 141 423 5838 6260 80 PB.4474.1 chr7 - 3187 6 full-splice_match ZSCAN29 rna24252 6057 6 7 2863 multi-exon FALSE canonical 36 221 1105 53.1319113151 8 0 0 FALSE 0 0 NA A coding 850 2550 586 3135 35 PB.9867.1 chr16 - 1317 12 full-splice_match AARSD1 rna53515 1433 12 112 4 multi-exon FALSE canonical 38 281 57 177.36403243 3 0 0 FALSE 0 0 NA A coding 411 1233 19 1251 30 PB.4581.1 chr7 - 920 5 full-splice_match FAM96A rna24778 1095 5 176 -1 multi-exon FALSE canonical 48 1052 194 412.280244494 2 0 0 FALSE 0 0 NA A coding 160 480 71 550 20 PB.10548.1 chr19 + 2557 3 intergenic novelGene_53 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 1437 0 7 31 2 FALSE 0 0 NA A non_coding NA NA NA NA 100 PB.4288.10 chr6 + 1760 1 genic_intron novelGene_2388 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A coding 109 327 534 860 65 PB.9024.2 chr15 + 2496 1 genic FAM78A novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 4 7 NA FALSE 0 0 NA C coding 146 438 1623 2060 70 PB.9024.1 chr15 + 1733 2 full-splice_match FAM78A rna49061 1969 2 38 198 multi-exon FALSE canonical 40 249 659 NA 7 2 0 FALSE 0 0 NA C coding 283 849 337 1185 45 PB.1166.1 chr1 + 3220 1 antisense novelGene_ARID4B_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.12007.1 chrX + 2935 4 novel_in_catalog ARMCX5 novel NA NA NA NA combination_of_known_junctions FALSE canonical 18 36 116 116.352911438 2 3 0 FALSE 0 0 NA B coding 558 1674 927 2600 30 PB.5172.303 chr7 + 1532 7 fusion LOC720839_LOC106999609 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 296 2896.72884475 2 18 0 TRUE 0 0 NA B coding 371 1113 373 1485 25 PB.1814.1 chr2 - 2690 1 full-splice_match MARS2 rna9665 4647 1 1671 286 mono-exon FALSE canonical NA NA NA NA 25 0 NA FALSE 0 0 NA A coding 593 1779 6 1784 30 PB.4176.11 chr6 + 3787 15 full-splice_match MATR3 rna22640 4094 15 268 39 multi-exon FALSE canonical 38 211 61 3072.73819256 3 1 0 FALSE 0 0 NA C coding 847 2541 241 2781 20 PB.9883.1 chr16 + 1413 6 full-splice_match G6PC3 rna53593 1434 6 18 3 multi-exon FALSE canonical 33 143 610 30.1164406928 2 0 0 FALSE 0 0 NA A coding 346 1038 76 1113 15 PB.3619.1 chr5 + 3605 23 incomplete-splice_match NFKB1 rna19531 3575 24 132 -162 internal_fragment FALSE canonical 44 283 115 112.969022303 2 8 0 FALSE 0 0 NA B coding 956 2868 37 2904 10 PB.3619.7 chr5 + 5723 2 novel_in_catalog NFKB1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 389 4868 NA 2 17 0 FALSE 0 0 NA B coding 135 405 4622 5026 15 PB.5172.1 chr7 + 1560 8 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 104 3626.2113838 3 3 0 TRUE 0 0 NA B coding 196 588 837 1424 15 PB.12092.3 chrX + 4134 4 novel_in_catalog FHL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 28 9938 87 310.668633756 2 12 0 FALSE 0 0 NA C coding 154 462 66 527 25 PB.11584.1 chr20 + 3723 12 fusion LOC698976_CTCF novel NA NA NA NA no_subcategory FALSE canonical 33 98 122 282.157757292 8 0 0 TRUE 0 0 NA A coding 727 2181 249 2429 40 PB.5172.300 chr7 + 3086 11 fusion LOC708891_LOC106999609 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 371 3408.10313811 2 18 0 TRUE 0 0 NA B coding 265 795 857 1651 20 PB.10798.1 chr19 + 1310 1 genic_intron novelGene_387 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 10 PB.2579.1 chr3 - 2428 1 genic LUZP6 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 5 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.2579.2 chr3 - 733 4 full-splice_match MTPN rna13862 3854 4 86 3035 multi-exon FALSE canonical 48 1684 297 310.191876103 50 0 0 FALSE 0 0 NA A coding 118 354 226 579 65 PB.7267.1 chr11 - 3227 3 genic LOC107001018 novel NA NA NA NA no_subcategory FALSE canonical 31 152 263 90 2 3 0 FALSE 0 0 NA B coding 346 1038 1220 2257 80 PB.5172.307 chr7 + 1617 8 fusion LOC708891_LOC106999609 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 389 3603.62081801 2 6 0 TRUE 0 0 NA B coding 196 588 894 1481 15 PB.8924.2 chr14 + 1913 1 novel_in_catalog FOXRED1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.4176.12 chr6 + 3140 1 genic_intron novelGene_2250 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8600.3 chr14 + 3065 1 genic RPS13 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA B coding 118 354 960 1313 40 PB.8600.2 chr14 + 3007 2 novel_in_catalog RPS13 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 10696 47 NA 4 3 1 FALSE 0 0 NA B coding 118 354 902 1255 40 PB.1039.1 chr1 - 1895 5 full-splice_match TSEN15 rna5704 1972 5 66 11 multi-exon FALSE canonical 40 153 166 95.4515583948 6 1 0 FALSE 0 0 NA A coding 171 513 32 544 50 PB.9257.1 chr15 + 3733 5 incomplete-splice_match RNF38 rna50172 4808 11 1069 6 internal_fragment FALSE canonical 40 211 22 109.370928496 2 2 0 FALSE 0 0 NA A coding 121 363 27 389 30 PB.287.3 chr1 + 3094 4 novel_in_catalog THRAP3 novel NA NA NA NA combination_of_known_junctions TRUE canonical 45 842 75 575.943573625 2 1 0 FALSE 0 0 NA C coding 361 1083 210 1292 75 PB.287.2 chr1 + 4396 12 full-splice_match THRAP3 rna1500 3323 12 3 -1076 multi-exon FALSE canonical 45 842 63 503.133183163 8 0 0 FALSE 0 0 NA C coding 955 2865 198 3062 20 PB.287.1 chr1 + 1295 5 incomplete-splice_match THRAP3 rna1500 3323 12 7 2021 3prime_fragment FALSE canonical 45 842 59 554.727861208 14 0 0 FALSE 0 0 NA C coding 367 1101 194 1294 75 PB.5172.304 chr7 + 1972 9 fusion LOC711872_LOC106999609 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 319 3326.01879129 3 7 0 TRUE 0 0 NA B coding 375 1125 728 1852 35 PB.5569.4 chr8 - 2893 6 novel_in_catalog SLA novel NA NA NA NA combination_of_known_junctions FALSE canonical 36 531 78 300.009999833 3 2 0 FALSE 0 0 NA B coding 178 534 119 652 90 PB.287.4 chr1 + 3399 4 novel_in_catalog THRAP3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 2241 1745 83.8152730712 2 2 0 FALSE 0 0 NA C coding 321 963 1162 2124 60 PB.7582.1 chr12 - 5754 1 novel_in_catalog CERKL novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 13 3 NA FALSE 0 0 NA A coding 104 312 609 920 90 PB.6555.1 chr10 - 5405 2 antisense novelGene_TOM1_AS novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 2595 NA 2 45 1 FALSE 0 0 NA A coding 91 273 242 514 90 PB.2577.1 chr3 + 1024 3 intergenic novelGene_2467 novel NA NA NA NA no_subcategory FALSE canonical 32 414 135 151 6 1 0 FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.5387.1 chr8 - 2332 1 incomplete-splice_match NCOA2 rna29272 8471 23 6085 55 mono-exon FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 45 PB.1218.2 chr2 - 1652 1 genic_intron novelGene_140 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.1808.3 chr2 + 2994 9 novel_in_catalog MFSD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 1152 293 232.460749375 2 0 0 FALSE 0 0 NA C coding 150 450 376 825 30 PB.1506.1 chr2 - 1930 15 full-splice_match GNL3 rna8126 2051 15 112 9 multi-exon FALSE canonical 36 854 70 471.338519538 14 2 0 FALSE 0 0 NA C coding 549 1647 58 1704 35 PB.3799.1 chr5 + 983 9 full-splice_match FRG1 rna20743 983 9 11 -11 multi-exon FALSE canonical 46 1730 454 295.030506897 4 0 0 FALSE 0 0 NA A coding 258 774 138 911 30 PB.4354.2 chr6 - 2704 15 full-splice_match DBN1 rna23467 3056 15 64 288 multi-exon FALSE canonical 9 64 1192 180.105524624 4 8 0 FALSE 0 0 NA C coding 695 2085 100 2184 5 PB.10107.3 chr16 - 3708 3 novel_in_catalog STRA13 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 197 3032 49.4974746831 6 6 0 FALSE 0 0 NA A coding 203 609 2564 3172 10 PB.9877.3 chr16 + 1827 1 incomplete-splice_match DHX8 rna53559 6810 23 4981 3 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA C coding 10 30 267 296 35 PB.2730.1 chr4 + 3727 9 full-splice_match SIRT5 rna14708 1497 9 61 -2291 multi-exon FALSE canonical 34 316 34 143.662799639 3 3 0 FALSE 0 0 NA A coding 310 930 73 1002 50 PB.9877.1 chr16 + 6760 23 full-splice_match DHX8 rna53559 6810 23 53 -3 multi-exon FALSE canonical 45 414 3089 194.697200802 13 1 0 FALSE 0 0 NA C coding 1222 3666 147 3812 35 PB.2451.1 chr3 + 2845 1 genic CUTL1 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 16 NA FALSE 0 0 NA B coding 111 333 696 1028 95 PB.519.1 chr1 + 3195 1 genic_intron novelGene_1706 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 40 PB.297.1 chr1 + 2343 10 full-splice_match CDCA8 rna1545 2458 10 112 3 multi-exon FALSE canonical 15 85 884 37.762415177 2 1 0 FALSE 0 0 NA A coding 280 840 174 1013 25 PB.959.1 chr1 - 2775 4 full-splice_match TMCC2 rna5242 3217 4 440 2 multi-exon FALSE canonical 12 287 193 243.125482005 2 2 0 FALSE 0 0 NA A coding 469 1407 167 1573 5 PB.1506.5 chr2 - 1478 13 incomplete-splice_match GNL3 rna8126 2051 15 112 461 internal_fragment FALSE canonical 36 854 70 395.111376703 3 0 0 FALSE 0 0 NA C coding 473 1419 58 1476 60 PB.3718.2 chr5 - 5814 9 novel_not_in_catalog NR3C2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 30 178 326 118.232821162 4 2 0 TRUE 0 0 NA A coding 970 2910 371 3280 20 PB.1223.2 chr2 - 3357 1 incomplete-splice_match CGGBP1 rna6654 4275 3 806 113 mono-exon FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA C non_coding NA NA NA NA 10 PB.323.1 chr1 + 2760 6 full-splice_match ZFP69 rna1637 2884 6 63 61 multi-exon FALSE canonical 26 92 1174 52.1919534028 5 1 0 FALSE 0 0 NA A coding 526 1578 956 2533 55 PB.8939.1 chr14 + 3492 16 full-splice_match APLP2 rna48556 3573 16 74 7 multi-exon FALSE canonical 47 1366 184 1283.00623537 163 1 0 FALSE 0 0 NA C coding 642 1926 239 2164 15 PB.4310.1 chr6 + 3862 2 genic_intron novelGene_2507 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 29 NA 2 2 0 FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.6903.1 chr11 + 3443 2 antisense novelGene_LOC107000844_AS novel NA NA NA NA no_subcategory FALSE canonical 0 0 2334 NA 3 9 0 FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.12016.1 chrX + 2786 7 full-splice_match RNF128 rna64702 2843 7 31 26 multi-exon FALSE canonical 24 576 1214 180.809291797 54 0 0 FALSE 0 0 NA A coding 428 1284 231 1514 25 PB.9781.2 chr16 + 2762 5 novel_in_catalog SCRN2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 42 473 1834 189.936831605 5 0 0 FALSE 0 0 NA C coding 206 618 1591 2208 25 PB.9781.3 chr16 + 3140 1 novel_in_catalog SCRN2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 11 NA FALSE 0 0 NA C coding 132 396 2596 2991 25 PB.4800.5 chr7 - 2861 8 full-splice_match HNRNPC rna25932 2927 8 64 2 multi-exon FALSE canonical 48 1608 129 4178.60515005 2 1 0 FALSE 0 0 NA C coding 293 879 166 1044 20 PB.9781.1 chr16 + 1520 8 full-splice_match SCRN2 rna53027 1535 8 13 2 multi-exon FALSE canonical 42 419 448 194.399074072 30 0 0 FALSE 0 0 NA C coding 428 1284 93 1376 20 PB.414.1 chr1 - 4525 18 full-splice_match NDC1 rna2203 5268 18 738 5 multi-exon FALSE canonical 30 73 56 75.7561878661 3 1 0 FALSE 0 0 NA A coding 559 1677 345 2021 30 PB.1418.1 chr2 + 1544 8 full-splice_match EMC3 rna7570 1365 8 285 -464 multi-exon FALSE canonical 48 2318 340 363.730669589 9 1 0 FALSE 0 0 NA A coding 261 783 186 968 90 PB.4800.1 chr7 - 1739 9 novel_not_in_catalog HNRNPC novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 511 4540.95353423 229 1 0 FALSE 0 0 NA C coding 171 513 561 1073 45 PB.3600.1 chr5 - 3530 1 genic_intron novelGene_1782 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.7183.1 chr11 - 3646 15 incomplete-splice_match UHRF1BP1L rna38990 5471 21 -1 1826 internal_fragment FALSE canonical 45 561 568 213.47365177 13 2 0 FALSE 0 0 NA B coding 1138 3414 231 3644 50 PB.5920.1 chr9 + 2818 14 incomplete-splice_match KIF20B rna32279 5581 32 3482 -719 internal_fragment FALSE canonical 30 282 1455 47.0319040652 2 2 0 FALSE 0 0 NA B coding 582 1746 181 1926 5 PB.9777.1 chr16 - 1847 14 full-splice_match CDK5RAP3 rna53013 1857 14 8 2 multi-exon FALSE canonical 42 460 76 270.024073001 37 3 0 FALSE 0 0 NA C coding 506 1518 71 1588 40 PB.9851.1 chr16 - 2599 1 genic LOC106994047 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 6 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.9777.2 chr16 - 1605 2 novel_in_catalog CDK5RAP3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 42 460 33 NA 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA 95 PB.2037.16 chr3 - 2732 16 novel_not_in_catalog MX1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 2 97 1006.15356681 2 0 0 FALSE 0 0 NA C coding 661 1983 290 2272 15 PB.9006.1 chr15 - 3341 1 antisense novelGene_TSC1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 8 NA FALSE 0 0 NA A coding 112 336 972 1307 90 PB.12149.1 chrY - 2875 1 intergenic novelGene_36 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.4788.1 chr7 - 1817 10 full-splice_match TTC5 rna25826 1932 10 111 4 multi-exon FALSE canonical 39 256 1217 134.059688199 25 2 0 FALSE 0 0 NA A coding 440 1320 15 1334 55 PB.344.1 chr1 + 2752 1 genic_intron novelGene_911 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8059.2 chr13 + 2714 4 novel_not_in_catalog ETAA1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 31 128 545 269.048322797 2 1 0 FALSE 0 0 NA C coding 145 435 117 551 45 PB.8787.4 chr14 - 3143 4 novel_not_in_catalog TMEM123 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 2 116 1852.46673384 2 2 0 FALSE 0 0 NA C coding 174 522 59 580 35 PB.5580.4 chr8 - 3996 29 fusion LOC711466_LOC699757 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 2801 203.850435369 12 34 0 TRUE 0 0 NA B coding 592 1776 111 1886 0 PB.6704.1 chr11 + 7030 2 intergenic novelGene_43 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 3350 NA 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.2037.18 chr3 - 5680 14 novel_in_catalog MX1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 21 74 23 1038.00963387 2 4 0 FALSE 0 0 NA C coding 294 882 3276 4157 15 PB.9162.1 chr15 + 3057 4 full-splice_match ZFP37 rna49730 3074 4 13 4 multi-exon FALSE canonical 36 130 248 91.4549069214 2 6 0 FALSE 0 0 NA A coding 630 1890 117 2006 30 PB.6051.2 chr9 + 1386 10 novel_not_in_catalog TCF7L2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 550 32.109188716 2 35 0 TRUE 0 0 NA B coding 190 570 815 1384 70 PB.5477.16 chr8 - 2832 6 full-splice_match YWHAZ rna29705 3002 6 15 155 multi-exon FALSE canonical 30 115 133 4163.30325583 3 1 0 FALSE 0 0 NA C coding 245 735 145 879 20 PB.5477.17 chr8 - 1852 7 novel_not_in_catalog YWHAZ novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 21 4162.56075031 2 2 0 TRUE 0 0 NA C coding 245 735 109 843 25 PB.5477.10 chr8 - 2871 6 novel_not_in_catalog YWHAZ novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 126 4208.77416833 2 7 1 TRUE 0 0 NA C coding 245 735 141 875 20 PB.5477.11 chr8 - 3015 8 novel_not_in_catalog YWHAZ novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 244 4682.23899433 2 11 2 TRUE 0 0 NA C coding 245 735 292 1026 35 PB.5477.13 chr8 - 2785 6 full-splice_match YWHAZ rna29704 2972 6 34 153 multi-exon FALSE canonical 39 508 84 4008.00199601 2 1 0 FALSE 0 0 NA C coding 245 735 96 830 25 PB.1829.1 chr2 - 3237 1 genic_intron novelGene_2421 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.11714.1 chr20 + 1633 1 genic_intron novelGene_1413 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5477.19 chr8 - 2563 1 genic_intron novelGene_1809 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 30 PB.4290.16 chr6 + 2689 19 incomplete-splice_match CYFIP2 rna23151 6507 31 1412 2406 internal_fragment FALSE canonical 41 507 2171 465.39338199 3 0 0 FALSE 0 0 NA C coding 798 2394 91 2484 90 PB.1045.8 chr1 - 1828 12 novel_in_catalog DHX9 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 485 757 1029.0651097 2 0 0 FALSE 0 0 NA C coding 222 666 132 797 75 PB.10392.1 chr18 - 910 4 full-splice_match MYL12A rna56145 1322 4 403 9 multi-exon FALSE canonical 48 7709 69 3576.78067541 14 1 0 FALSE 0 0 NA A coding 171 513 85 597 35 PB.3639.1 chr5 - 1372 7 full-splice_match CASP6 rna19690 2562 7 927 263 multi-exon FALSE canonical 29 131 82 67.4166151627 8 1 0 FALSE 0 0 NA A coding 293 879 43 921 80 PB.3260.5 chr4 + 1518 1 incomplete-splice_match CD164 rna17724 3263 5 1739 7 mono-exon FALSE canonical NA NA NA NA 6 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.1045.2 chr1 - 4068 28 full-splice_match DHX9 rna5740 4363 28 -7 302 multi-exon FALSE canonical 48 1980 1605 481.571386193 110 5 0 FALSE 0 0 NA C coding 1275 3825 132 3956 15 PB.12125.1 chrX + 2619 1 genic_intron novelGene_2321 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1045.6 chr1 - 4407 29 full-splice_match DHX9 rna5741 4459 29 44 8 multi-exon FALSE canonical 47 485 757 743.486381852 4 1 0 FALSE 0 0 NA C coding 1061 3183 911 4093 25 PB.2238.2 chr3 + 3897 7 novel_not_in_catalog LOC700358 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 5 5 252 364.880802455 5 3 0 FALSE 0 0 NA B coding 888 2664 490 3153 45 PB.9488.1 chr16 + 1811 10 full-splice_match RNF167 rna51531 1778 10 -40 7 multi-exon FALSE canonical 29 260 639 454.053961551 6 1 0 FALSE 0 0 NA C coding 350 1050 556 1605 35 PB.9488.2 chr16 + 1707 10 novel_in_catalog RNF167 novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 184 29 474.331107983 34 0 0 FALSE 0 0 NA C coding 350 1050 453 1502 35 PB.9488.3 chr16 + 1560 9 incomplete-splice_match RNF167 rna51531 1778 10 213 5 internal_fragment FALSE canonical 40 260 386 417.511676483 9 1 0 FALSE 0 0 NA C coding 350 1050 303 1352 45 PB.9488.4 chr16 + 1238 8 novel_in_catalog RNF167 novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 591 145 321.544709177 2 0 0 FALSE 0 0 NA C coding 315 945 86 1030 45 PB.2238.4 chr3 + 3537 5 incomplete-splice_match LOC700358 rna12047 4514 7 970 7 internal_fragment FALSE canonical 32 108 42 324.718339488 9 0 0 FALSE 0 0 NA B coding 922 2766 29 2794 45 PB.6037.2 chr9 + 4167 15 full-splice_match ADD3 rna32895 4482 15 306 9 multi-exon FALSE canonical 45 813 78 1229.02156206 11 2 0 FALSE 0 0 NA C coding 706 2118 109 2226 40 PB.8761.3 chr14 - 1433 2 novel_in_catalog CTSC novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 1995 268 NA 2 11 0 FALSE 0 0 NA C coding 119 357 97 453 70 PB.11334.1 chr20 + 3144 2 novel_not_in_catalog SNN novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 40 NA 6 10 1 FALSE 0 0 NA C coding 88 264 126 389 30 PB.11334.2 chr20 + 2562 1 full-splice_match SNN rna61483 1956 1 595 -1201 mono-exon FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 45 PB.11626.3 chr20 - 3995 11 novel_not_in_catalog ST3GAL2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1765 245.633873886 19 11 0 TRUE 0 0 NA B coding 186 558 1161 1718 85 PB.11626.4 chr20 - 3564 10 novel_not_in_catalog ST3GAL2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1732 252.49950495 2 5 0 TRUE 0 0 NA B coding 199 597 1172 1768 20 PB.11626.5 chr20 - 2923 2 novel_not_in_catalog ST3GAL2 novel NA NA NA NA not any annotated donor/acceptor TRUE canonical 0 0 2713 NA 7 2 0 TRUE 0 0 NA B non_coding NA NA NA NA 90 PB.515.7 chr1 - 2774 12 novel_not_in_catalog LOC695158 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 12 13 138 333.417156127 2 14 0 FALSE 0 0 NA B coding 326 978 1065 2042 70 PB.8761.4 chr14 - 1473 1 novel_in_catalog CTSC novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.3490.1 chr5 - 3908 1 intergenic novelGene_1151 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 10 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.4876.1 chr7 - 2897 1 genic TRAPPC6B novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 13 5 NA FALSE 0 0 NA C non_coding NA NA NA NA 55 PB.4876.2 chr7 - 3952 6 full-splice_match TRAPPC6B rna26407 983 6 -52 -2917 multi-exon FALSE canonical 45 539 462 238.482703775 2 9 0 FALSE 0 0 NA C coding 158 474 314 787 45 PB.7705.3 chr12 - 3011 8 novel_not_in_catalog CNPPD1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 573 375.009333217 2 9 0 FALSE 0 0 NA C coding 433 1299 124 1422 30 PB.5584.1 chr8 + 3073 1 genic_intron novelGene_2285 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5172.568 chr7 + 1953 7 novel_not_in_catalog LOC711872 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 417 3396.22599366 2 20 0 FALSE 0 0 NA B coding 375 1125 706 1830 35 PB.5172.567 chr7 + 1537 6 fusion LOC720839_LOC711872 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 418 2440.92892154 3 6 0 TRUE 0 0 NA B coding 245 735 757 1491 25 PB.8767.1 chr14 + 1738 13 incomplete-splice_match CEP295 rna47630 8013 28 155 6120 3prime_fragment FALSE canonical 42 390 74 141.50618361 2 0 0 FALSE 0 0 NA B coding 551 1653 86 1738 80 PB.5172.565 chr7 + 1513 6 fusion LOC720839_LOC714310 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 417 2829.32818881 5 18 0 TRUE 0 0 NA B coding 465 1395 68 1462 15 PB.5172.564 chr7 + 1615 7 fusion LOC711872_LOC708891_LOC714310 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 432 3684.10857603 2 17 0 TRUE 0 0 NA A coding 196 588 895 1482 15 PB.4279.1 chr6 + 4414 3 genic SAP30L novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 22 0 2 8 0 TRUE 0 0 NA B coding 120 360 2040 2399 80 PB.9713.2 chr16 + 1597 1 incomplete-splice_match SRSF1 rna52695 5493 4 1260 2637 mono-exon FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 40 PB.9713.1 chr16 + 2613 4 full-splice_match SRSF1 rna52695 5493 4 244 2636 multi-exon FALSE canonical 48 1249 153 1545.85283905 334 0 0 FALSE 0 0 NA C coding 108 324 380 703 40 PB.11535.12 chr20 + 6526 49 novel_not_in_catalog NLRC5 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 3799 135.403101885 2 12 0 TRUE 0 0 NA B coding 1289 3867 54 3920 15 PB.4169.1 chr6 + 4143 5 full-splice_match FAM53C rna22614 3947 5 -1 -195 multi-exon FALSE canonical 37 247 1114 42.9301758673 34 0 0 FALSE 0 0 NA A coding 392 1176 194 1369 30 PB.11535.11 chr20 + 6787 51 novel_not_in_catalog NLRC5 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 4058 151.009933448 5 13 0 TRUE 0 0 NA B coding 1138 3414 180 3593 15 PB.2296.9 chr3 + 1672 1 incomplete-splice_match SKAP2 rna12320 3502 10 1823 8 mono-exon FALSE canonical NA NA NA NA 19 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 25 PB.11854.1 chrX + 2903 1 genic_intron novelGene_987 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 7 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.5453.1 chr8 + 2765 2 full-splice_match PLEKHF2 rna29593 2882 2 111 6 multi-exon FALSE canonical 39 313 110 NA 128 1 0 FALSE 0 0 NA C coding 249 747 125 871 10 PB.3470.1 chr5 - 2801 1 antisense novelGene_PLAC8_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 8 8 NA FALSE 0 0 NA B non_coding NA NA NA NA 85 PB.8767.2 chr14 + 1534 3 novel_in_catalog CEP295 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 390 69 262.499523809 2 1 0 FALSE 0 0 NA B coding 119 357 81 437 65 PB.11087.1 chr19 + 1117 8 full-splice_match RPL13A rna59968 646 8 -13 -458 multi-exon FALSE canonical 44 9645 36 22611.9291526 34 1 0 FALSE 0 0 NA A coding 203 609 22 630 25 PB.2296.3 chr3 + 2860 13 full-splice_match SKAP2 rna12317 1415 13 184 -1629 multi-exon FALSE canonical 15 28 1214 405.720347037 4 11 0 FALSE 0 0 NA C coding 359 1077 126 1202 80 PB.2296.1 chr3 + 1484 13 full-splice_match SKAP2 rna12318 2100 13 56 560 multi-exon TRUE canonical 40 319 1233 340.94720999 53 0 0 FALSE 0 0 NA C coding 359 1077 145 1221 25 PB.7432.1 chr12 + 2036 1 intergenic novelGene_422 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.11608.1 chr20 + 3804 18 full-splice_match TANGO6 rna62640 3646 18 57 -215 multi-exon FALSE canonical 45 196 3120 169.115345253 11 1 0 FALSE 0 0 NA A coding 1095 3285 10 3294 75 PB.8680.1 chr14 - 2648 16 full-splice_match CLPB rna47186 2343 16 156 -461 multi-exon FALSE canonical 37 410 1839 343.377343458 8 1 0 FALSE 0 0 NA A coding 677 2031 55 2085 15 PB.6122.1 chr9 + 1725 7 full-splice_match PAOX rna33409 2435 7 612 98 multi-exon FALSE canonical 6 8 233 169.195153595 16 1 0 FALSE 0 0 NA A coding 511 1533 53 1585 10 PB.7002.1 chr11 - 877 8 full-splice_match CD63 rna38134 892 8 8 7 multi-exon FALSE canonical 40 1212 65 2808.71536472 19 0 0 FALSE 0 0 NA A coding 238 714 77 790 45 PB.9615.5 chr16 + 2737 1 genic_intron novelGene_491 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.7502.9 chr12 - 1703 16 incomplete-splice_match PRPF40A rna40419 6827 26 197 4927 internal_fragment FALSE canonical 41 683 106 474.949470997 2 0 0 FALSE 0 0 NA C coding 545 1635 68 1702 60 PB.7502.8 chr12 - 2894 23 incomplete-splice_match PRPF40A rna40419 6827 26 -241 4174 internal_fragment FALSE canonical 41 683 544 475.010526199 2 0 0 FALSE 0 0 NA C coding 875 2625 269 2893 60 PB.1729.1 chr2 - 5869 1 genic_intron novelGene_2070 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 10 NA FALSE 0 0 NA A coding 101 303 3446 3748 60 PB.1702.1 chr2 - 2612 8 novel_not_in_catalog KLHL24 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 42 298 110 2471.00121408 10 6 0 FALSE 0 0 NA A coding 600 1800 235 2034 25 PB.2022.1 chr3 - 1788 13 full-splice_match RRP1 rna10846 1807 13 2 17 multi-exon FALSE canonical 45 239 905 143.10835056 22 3 0 FALSE 0 0 NA C coding 460 1380 95 1474 10 PB.2022.2 chr3 - 3144 12 novel_in_catalog RRP1 novel NA NA NA NA combination_of_known_junctions TRUE canonical 46 239 889 139.896390232 3 2 0 FALSE 0 0 NA C coding 364 1092 79 1170 10 PB.7502.5 chr12 - 2911 27 novel_not_in_catalog PRPF40A novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 24 638.534259065 2 0 0 TRUE 0 0 NA C coding 915 2745 62 2806 60 PB.7502.4 chr12 - 2929 26 full-splice_match PRPF40A rna40420 6839 26 197 3713 multi-exon FALSE canonical 41 303 1901 612.850715917 5 2 0 FALSE 0 0 NA C coding 919 2757 68 2824 60 PB.7502.7 chr12 - 2742 25 novel_not_in_catalog PRPF40A novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 2 35 567.705029042 2 0 0 TRUE 0 0 NA C coding 840 2520 222 2741 60 PB.9274.3 chr15 + 3099 9 novel_in_catalog FANCG novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 10 16 1133 71.7774337797 2 10 0 FALSE 0 0 NA C coding 230 690 488 1177 20 PB.12087.2 chrX + 3267 1 genic_intron novelGene_2177 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 11 NA FALSE 0 0 NA B coding 9 27 289 315 85 PB.7447.1 chr12 - 2756 1 genic_intron novelGene_480 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8492.1 chr14 - 2820 1 genic_intron novelGene_421 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 18 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.2646.1 chr3 - 1781 10 full-splice_match FASTK rna14261 1862 10 73 8 multi-exon FALSE canonical 33 189 1465 230.369268784 21 1 0 FALSE 0 0 NA C coding 515 1545 141 1685 15 PB.9847.2 chr16 - 3904 12 novel_in_catalog DHX58 novel NA NA NA NA combination_of_known_junctions FALSE canonical 35 122 88 138.340160474 3 2 0 FALSE 0 0 NA C coding 585 1755 90 1844 20 PB.11705.4 chr20 + 5525 2 novel_not_in_catalog KIAA0513 novel NA NA NA NA not any annotated donor/acceptor FALSE canonical 0 0 5300 NA 3 9 0 TRUE 0 0 NA C coding 215 645 3255 3899 75 PB.11705.5 chr20 + 2612 1 intergenic novelGene_1400 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 14 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.3149.1 chr4 - 3368 3 full-splice_match RAB32 rna17109 1200 3 135 -2303 multi-exon FALSE canonical 45 480 289 455.499725576 4 12 0 FALSE 0 0 NA A coding 225 675 40 714 20 PB.11705.1 chr20 + 3511 12 full-splice_match KIAA0513 rna62983 1575 12 33 -1969 multi-exon FALSE canonical 33 143 57 255.025488922 39 1 0 FALSE 0 0 NA C coding 401 1203 214 1416 15 PB.11705.2 chr20 + 5558 6 novel_not_in_catalog KIAA0513 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 5328 438.99658313 2 2 0 TRUE 0 0 NA C coding 197 591 214 804 80 PB.5172.9 chr7 + 1580 10 fusion LOC708891_LOC711872_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 193 3445.78786346 2 13 0 TRUE 0 0 NA B coding 196 588 860 1447 15 PB.9247.1 chr15 - 1830 12 full-splice_match POLR1E rna50153 3609 12 6 1773 multi-exon FALSE canonical 47 555 177 146.741268906 4 0 0 FALSE 0 0 NA A coding 419 1257 102 1358 15 PB.9286.1 chr15 + 4645 26 full-splice_match NOL6 rna50403 4715 26 66 4 multi-exon FALSE canonical 26 50 2269 96.6178037424 4 0 0 FALSE 0 0 NA A coding 1146 3438 61 3498 15 PB.3168.2 chr4 - 3123 1 genic_intron novelGene_2140 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.10010.1 chr16 + 2483 9 full-splice_match RAB37 rna54196 1565 9 27 -945 multi-exon FALSE canonical 26 81 110 108.111054014 8 2 0 FALSE 0 0 NA A coding 223 669 18 686 40 PB.4293.1 chr6 - 2146 12 full-splice_match CLINT1 rna23176 3436 12 53 1237 multi-exon FALSE canonical 48 1402 193 1022.58789353 136 0 0 FALSE 0 0 NA C coding 625 1875 153 2027 50 PB.11937.1 chrX + 2592 12 full-splice_match NONO rna64278 3152 12 557 3 multi-exon FALSE canonical 40 2044 1225 611.143191077 257 2 0 FALSE 0 0 NA C coding 471 1413 95 1507 10 PB.4293.3 chr6 - 3063 1 novel_in_catalog CLINT1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA C non_coding NA NA NA NA 60 PB.4293.2 chr6 - 3354 12 full-splice_match CLINT1 rna23179 3485 12 11 120 multi-exon FALSE canonical 43 749 1569 1180.6997925 64 2 0 FALSE 0 0 NA C coding 643 1929 190 2118 30 PB.2517.1 chr3 - 2726 1 genic_intron novelGene_2348 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 13 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.11288.1 chr20 + 1614 2 novel_in_catalog MEFV novel NA NA NA NA combination_of_known_junctions FALSE canonical 29 409 321 NA 6 1 0 FALSE 0 0 NA B coding 329 987 45 1031 70 PB.2507.1 chr3 + 1776 12 full-splice_match ING3 rna13553 2221 12 56 389 multi-exon FALSE canonical 43 414 453 174.444833687 5 0 0 FALSE 0 0 NA C coding 418 1254 90 1343 80 PB.11288.3 chr20 + 2611 8 novel_in_catalog MEFV novel NA NA NA NA combination_of_known_junctions FALSE canonical 29 279 447 58.4722156242 7 2 0 FALSE 0 0 NA B coding 418 1254 181 1434 20 PB.6734.3 chr11 - 3224 13 full-splice_match SCNN1A rna36664 3251 13 17 10 multi-exon FALSE canonical 4 9 145 84.8587060943 4 2 1 FALSE 0 0 NA C coding 669 2007 200 2206 30 PB.6734.2 chr11 - 3804 12 full-splice_match SCNN1A rna36663 3745 12 -69 10 multi-exon TRUE canonical 12 145 1460 54.8543526076 40 2 0 FALSE 0 0 NA C coding 726 2178 606 2783 40 PB.6734.6 chr11 - 3160 4 novel_in_catalog SCNN1A novel NA NA NA NA combination_of_known_junctions FALSE canonical 4 12 59 135.561794028 2 6 0 FALSE 0 0 NA C coding 292 876 114 989 80 PB.6734.5 chr11 - 3288 13 novel_not_in_catalog SCNN1A novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 207 86.6083136887 2 5 1 FALSE 0 0 NA C coding 669 2007 262 2268 35 PB.6734.4 chr11 - 2914 13 full-splice_match SCNN1A rna36662 4779 13 1628 237 multi-exon FALSE canonical 4 12 59 84.2140130857 40 0 0 FALSE 0 0 NA C coding 669 2007 114 2120 35 PB.2952.1 chr4 + 3742 3 novel_in_catalog ABCC10 novel NA NA NA NA combination_of_known_junctions FALSE canonical 36 143 379 1 2 3 0 FALSE 0 0 NA B coding 503 1509 219 1727 75 PB.9232.1 chr15 - 1817 3 novel_in_catalog C15H9orf129 novel NA NA NA NA combination_of_known_junctions FALSE canonical 18 34 611 185.499326144 2 2 1 FALSE 0 0 NA A coding 119 357 644 1000 70 PB.5172.389 chr7 + 1588 8 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 317 3623.1896169 2 10 0 TRUE 0 0 NA B coding 472 1416 37 1452 15 PB.11937.2 chrX + 3122 11 novel_in_catalog NONO novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 2494 262 535.203699539 12 0 0 FALSE 0 0 NA C coding 390 1170 109 1278 10 PB.6047.2 chr9 + 3303 21 full-splice_match ACSL5 rna32949 3858 21 548 7 multi-exon FALSE canonical 37 383 202 102.46950766 65 0 0 FALSE 0 0 NA C coding 683 2049 232 2280 15 PB.6047.3 chr9 + 2595 22 novel_not_in_catalog ACSL5 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 11 21 2323 174.295725708 5 9 1 TRUE 0 0 NA C coding 683 2049 266 2314 10 PB.6047.1 chr9 + 3157 21 incomplete-splice_match ACSL5 rna32946 3383 22 217 9 internal_fragment FALSE canonical 10 201 58 132.984961556 23 2 0 FALSE 0 0 NA C coding 683 2049 88 2136 20 PB.5172.383 chr7 + 1487 7 novel_not_in_catalog LOC720839 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 298 2352.13605049 4 12 0 TRUE 0 0 NA B coding 245 735 703 1437 15 PB.10566.1 chr19 - 2109 1 incomplete-splice_match TCF3 rna57183 4521 19 2405 8 mono-exon FALSE canonical NA NA NA NA 7 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 30 PB.5172.381 chr7 + 1575 11 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 287 3478.40825666 2 10 0 TRUE 0 0 NA B coding 196 588 867 1454 10 PB.9274.1 chr15 + 2632 14 full-splice_match FANCG rna50313 2642 14 -7 17 multi-exon FALSE canonical 33 122 1018 51.7010638188 8 1 0 FALSE 0 0 NA C coding 622 1866 509 2374 15 PB.5172.387 chr7 + 2110 10 novel_not_in_catalog LOC711872 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 293 3264.33852411 2 29 2 TRUE 0 0 NA B coding 607 1821 38 1858 25 PB.5172.386 chr7 + 1496 8 novel_not_in_catalog LOC720839 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 352 2879.79218 4 17 0 TRUE 0 0 NA B coding 471 1413 38 1450 25 PB.9454.1 chr16 - 2659 15 full-splice_match TSR1 rna51395 4092 15 1040 393 multi-exon FALSE canonical 39 299 125 145.790946221 13 0 0 FALSE 0 0 NA A coding 805 2415 29 2443 35 PB.11937.4 chrX + 2574 11 full-splice_match NONO rna64279 3038 11 459 5 multi-exon FALSE canonical 35 173 69 1093.06266975 3 0 0 FALSE 0 0 NA C coding 471 1413 79 1491 10 PB.3699.1 chr5 - 2779 21 novel_in_catalog INPP4B novel NA NA NA NA combination_of_known_junctions FALSE canonical 42 423 2607 200.084981945 12 1 0 FALSE 0 0 NA A coding 739 2217 521 2737 25 PB.4801.7 chr7 - 1469 12 incomplete-splice_match SUPT16H rna25942 4680 26 244 2967 internal_fragment FALSE canonical 48 1089 1135 310.778055853 4 0 0 FALSE 0 0 NA C coding 460 1380 90 1469 60 PB.2385.3 chr3 - 908 5 full-splice_match SAMD9L rna12864 5705 5 38 4759 multi-exon FALSE canonical 39 303 345 238.014705428 79 0 0 FALSE 0 0 NA C coding 106 318 591 908 70 PB.10265.1 chr17 + 1313 10 full-splice_match RNASEH2B rna55367 1624 10 306 5 multi-exon FALSE canonical 42 260 798 500.840293906 2 0 0 FALSE 0 0 NA A coding 254 762 67 828 35 PB.11937.6 chrX + 3519 10 novel_in_catalog NONO novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 2494 286 559.03577703 2 2 0 FALSE 0 0 NA C coding 343 1029 133 1161 10 PB.4937.1 chr7 - 3147 1 antisense novelGene_KTN1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.3839.1 chr6 - 4240 17 incomplete-splice_match MYO10 rna20909 8017 41 3772 5 5prime_fragment FALSE canonical 27 287 253 73.3757453114 2 4 0 FALSE 0 0 NA B coding 934 2802 70 2871 15 PB.5746.1 chr9 - 3663 16 full-splice_match ITGB1 rna31082 3798 16 123 12 multi-exon FALSE canonical 41 838 102 1554.45746162 325 1 0 FALSE 0 0 NA C coding 798 2394 103 2496 30 PB.7617.1 chr12 + 2617 2 full-splice_match C12H2orf69 rna41117 3705 2 126 962 multi-exon FALSE canonical 30 131 376 NA 5 2 0 FALSE 0 0 NA A coding 386 1158 41 1198 80 PB.5746.3 chr9 - 2935 1 novel_in_catalog ITGB1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 13 7 NA FALSE 0 0 NA C non_coding NA NA NA NA 25 PB.10479.1 chr18 - 1616 11 full-splice_match FECH rna56765 3791 11 57 2118 multi-exon FALSE canonical 33 251 146 568.568377594 61 0 0 FALSE 0 0 NA A coding 423 1269 80 1348 40 PB.11280.1 chr20 - 2981 12 full-splice_match CLUAP1 rna61174 1915 12 58 -1124 multi-exon FALSE canonical 34 351 86 127.314571044 4 3 0 FALSE 0 0 NA A coding 414 1242 65 1306 55 PB.8695.1 chr14 - 2041 9 novel_not_in_catalog UCP2 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 2010 315.425109971 2 1 0 TRUE 0 0 NA C coding 309 927 378 1304 25 PB.7975.2 chr13 - 2727 2 genic_intron novelGene_955 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 28 NA 2 5 0 FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.2993.1 chr4 - 3899 12 novel_not_in_catalog DST novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 3874 1364.35772435 2 2 0 TRUE 0 0 NA B coding 1056 3168 732 3899 30 PB.7951.1 chr13 - 2613 13 novel_not_in_catalog HNRNPLL novel NA NA NA NA any annotated donor/acceptor FALSE canonical 42 399 512 469.012793002 10 0 0 TRUE 0 0 NA A coding 542 1626 324 1949 35 PB.9267.1 chr15 + 1208 5 full-splice_match SIT1 rna50265 1153 5 41 -96 multi-exon FALSE canonical 27 284 291 48.3011387029 8 0 0 FALSE 0 0 NA A coding 196 588 56 643 40 PB.2471.2 chr3 + 3831 11 full-splice_match PIK3CG rna13346 6954 11 45 3078 multi-exon FALSE canonical 20 55 81 93.4879671402 12 0 0 FALSE 0 0 NA C coding 1102 3306 94 3399 15 PB.5410.1 chr8 + 1932 1 antisense novelGene_IL7_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 10 0 NA FALSE 0 0 NA A coding 100 300 578 877 75 PB.10078.2 chr16 - 3003 12 full-splice_match TBC1D16 rna54486 10886 12 0 7883 multi-exon FALSE canonical 5 5 75 118.317369815 55 0 0 FALSE 0 0 NA C coding 767 2301 138 2438 85 PB.10078.3 chr16 - 3811 3 novel_in_catalog TBC1D16 novel NA NA NA NA combination_of_known_junctions FALSE canonical 5 5 78 65.4980915753 8 5 0 FALSE 0 0 NA C coding 260 780 141 920 80 PB.5285.1 chr8 + 2502 10 full-splice_match MAK16 rna28750 996 10 -21 -1485 multi-exon FALSE canonical 39 273 74 110.072703247 2 4 0 FALSE 0 0 NA A coding 300 900 60 959 85 PB.2225.3 chr3 + 3152 22 full-splice_match MYO1G rna11963 3163 22 119 -108 multi-exon FALSE canonical 14 22 2926 191.697678651 112 7 0 FALSE 0 0 NA C coding 1042 3126 27 3152 25 PB.289.1 chr1 - 858 2 full-splice_match LSM10 rna1510 814 2 -53 9 multi-exon FALSE canonical 44 517 141 NA 3 1 0 FALSE 0 0 NA A coding 123 369 166 534 25 PB.8128.1 chr13 - 1480 9 novel_not_in_catalog TMEM150A novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 338 66.7457863839 2 11 0 TRUE 0 0 NA A coding 227 681 267 947 10 PB.306.1 chr1 - 1488 5 full-splice_match MYCBP rna1564 1578 5 70 20 multi-exon FALSE canonical 44 402 30 406.457869896 17 3 0 FALSE 0 0 NA A coding 103 309 16 324 20 PB.2752.1 chr4 - 2993 1 genic_intron novelGene_427 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A coding 120 360 694 1053 85 PB.6186.1 chr10 - 2905 3 full-splice_match PARD6B rna33775 1951 3 33 -987 multi-exon FALSE canonical 23 108 341 143.499128917 4 7 0 FALSE 0 0 NA A coding 373 1119 273 1391 90 PB.4921.1 chr7 - 1484 7 full-splice_match GMFB rna26606 4286 7 157 2645 multi-exon FALSE canonical 43 961 97 521.297419905 28 1 0 FALSE 0 0 NA A coding 142 426 95 520 20 PB.8314.2 chr14 - 2002 9 novel_in_catalog ALDH3B1 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical 0 0 70 56.0357029045 2 1 0 FALSE 0 0 NA A coding 387 1161 152 1312 25 PB.11095.2 chr19 + 1276 10 incomplete-splice_match PRMT1 rna59996 3295 11 57 1962 3prime_fragment FALSE canonical 46 971 50 501.434940944 15 0 0 FALSE 0 0 NA C coding 353 1059 15 1073 5 PB.11095.3 chr19 + 3230 11 full-splice_match PRMT1 rna59996 3295 11 62 3 multi-exon FALSE canonical 6 8 2766 709.896471325 3 0 0 FALSE 0 0 NA C coding 353 1059 10 1068 5 PB.10445.1 chr18 + 2573 14 full-splice_match MOCOS rna56420 2634 14 13 48 multi-exon FALSE canonical 16 49 166 97.3447481891 3 3 0 FALSE 0 0 NA C coding 851 2553 19 2571 70 PB.10445.2 chr18 + 2754 15 full-splice_match MOCOS rna56419 2751 15 -11 8 multi-exon FALSE canonical 16 49 190 87.9772697917 3 1 0 FALSE 0 0 NA C coding 891 2673 43 2715 25 PB.9761.2 chr16 - 2816 7 full-splice_match UBE2Z rna52937 3919 7 1092 11 multi-exon FALSE canonical 35 233 164 195.869854751 4 2 0 FALSE 0 0 NA A coding 246 738 172 909 30 PB.5050.1 chr7 + 2663 4 full-splice_match CIPC rna27270 2814 4 19 132 multi-exon FALSE canonical 42 494 115 377.221420389 10 1 0 FALSE 0 0 NA A coding 399 1197 168 1364 30 PB.602.1 chr1 - 1465 1 full-splice_match KCNA3 rna3281 3335 1 1861 9 mono-exon FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.1295.1 chr2 - 3007 1 intergenic novelGene_788 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5172.516 chr7 + 1523 7 fusion LOC720839_LOC714734 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 386 2319.36823295 2 13 0 TRUE 0 0 NA B coding 245 735 736 1470 10 PB.3942.1 chr6 + 2892 20 full-splice_match KIF2A rna21436 3992 20 283 817 multi-exon FALSE canonical 41 212 428 225.173266619 9 0 0 FALSE 0 0 NA C coding 687 2061 29 2089 45 PB.9106.1 chr15 + 2751 1 genic_intron novelGene_335 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 60 PB.12064.1 chrX - 2880 1 genic TENM1 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 9 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.334.1 chr1 + 1514 8 full-splice_match YBX1 rna1765 1750 8 224 12 multi-exon FALSE canonical 48 2748 305 3900.22191676 31 1 0 FALSE 0 0 NA C coding 324 972 140 1111 15 PB.334.2 chr1 + 1410 8 novel_not_in_catalog YBX1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 48 4815.82256733 2 0 0 TRUE 0 0 NA C coding 127 381 634 1014 35 PB.334.3 chr1 + 2561 1 genic_intron novelGene_884 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 23 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.9614.1 chr16 + 5859 1 novel_in_catalog KSR1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A coding 253 759 4400 5158 30 PB.10948.1 chr19 + 3812 13 novel_not_in_catalog SAMD4B novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 155 83.7794724261 9 7 0 TRUE 0 0 NA A coding 694 2082 358 2439 0 PB.5172.591 chr7 + 1704 7 novel_not_in_catalog LOC711872 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1325 3637.26023265 4 21 2 TRUE 0 0 NA B coding 442 1326 260 1585 25 PB.7633.2 chr12 + 3046 9 full-splice_match CASP8 rna41193 2521 9 15 -540 multi-exon FALSE canonical 38 180 631 395.828245581 5 5 0 FALSE 0 0 NA C coding 479 1437 658 2094 15 PB.7482.12 chr12 - 2778 3 novel_not_in_catalog ZEB2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 22 41 378 690.499818972 6 0 0 FALSE 0 0 NA C coding 58 174 306 479 15 PB.7633.7 chr12 + 2470 9 full-splice_match CASP8 rna41200 2066 9 137 -541 multi-exon FALSE canonical 32 838 54 193.222669477 18 0 0 FALSE 0 0 NA C coding 479 1437 81 1517 15 PB.9087.1 chr15 - 1526 7 novel_not_in_catalog GARNL3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 6 8 363 104.144130896 2 0 0 FALSE 0 0 NA A coding 243 729 513 1241 20 PB.7633.5 chr12 + 2446 9 novel_not_in_catalog CASP8 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 33 453.68050432 2 2 0 FALSE 0 0 NA C coding 493 1479 18 1496 20 PB.3292.1 chr4 + 3024 13 full-splice_match SMOC2 rna17914 3079 13 48 7 multi-exon FALSE canonical 21 57 649 94.9473538336 46 0 0 FALSE 0 0 NA C coding 446 1338 187 1524 30 PB.7876.4 chr13 + 3397 12 incomplete-splice_match NCOA1 rna42719 7074 24 1587 2090 internal_fragment FALSE canonical 46 401 3102 155.788317919 3 0 0 FALSE 0 0 NA B coding 1019 3057 31 3087 95 PB.7876.1 chr13 + 3747 15 novel_not_in_catalog NCOA1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 3434 279.150497044 2 3 2 FALSE 0 0 NA B coding 1126 3378 66 3443 90 PB.7876.2 chr13 + 3664 14 incomplete-splice_match NCOA1 rna42723 5009 23 1320 25 internal_fragment FALSE canonical 37 177 3369 183.196615689 2 0 0 FALSE 0 0 NA B coding 1179 3537 1 3537 95 PB.1200.1 chr1 - 3278 1 genic HNRNPU novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 4 4 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.1778.2 chr2 - 2650 1 novel_in_catalog COMMD2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA C coding 109 327 40 366 90 PB.4390.2 chr7 + 4410 31 novel_not_in_catalog CYFIP1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 73 361.317035303 10 16 0 TRUE 0 0 NA B coding 1254 3762 85 3846 10 PB.4390.1 chr7 + 4416 31 novel_not_in_catalog CYFIP1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 73 328.225532218 30 16 0 TRUE 0 0 NA B coding 1256 3768 85 3852 10 PB.1778.1 chr2 - 1402 5 full-splice_match COMMD2 rna9472 3651 5 9 2240 multi-exon FALSE canonical 46 370 273 254.903903462 27 0 0 FALSE 0 0 NA C coding 199 597 46 642 35 PB.811.1 chr1 - 1345 5 full-splice_match TAGLN2 rna4475 1241 5 -5 -99 multi-exon FALSE canonical 47 4159 58 1291.81500224 285 2 1 FALSE 0 0 NA C coding 199 597 76 672 15 PB.1357.1 chr2 - 2727 1 incomplete-splice_match ZNF148 rna7242 9577 9 6836 15 mono-exon FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA C non_coding NA NA NA NA 35 PB.811.4 chr1 - 1424 5 full-splice_match TAGLN2 rna4474 1434 5 2 8 multi-exon FALSE canonical 42 292 135 2684.05551358 14 0 0 FALSE 0 0 NA C coding 199 597 153 749 15 PB.811.5 chr1 - 5900 3 novel_not_in_catalog TAGLN2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 170 2214.49994355 2 16 0 TRUE 0 0 NA C coding 179 537 4013 4549 15 PB.261.1 chr1 - 1584 7 full-splice_match ZBTB8OS rna1333 1012 7 431 -1003 multi-exon FALSE canonical 48 864 375 335.970236777 23 1 0 FALSE 0 0 NA A coding 179 537 13 549 10 PB.8334.1 chr14 - 1431 8 full-splice_match RCE1 rna45075 1450 8 18 1 multi-exon FALSE canonical 26 51 198 69.4622199472 4 0 0 FALSE 0 0 NA A coding 329 987 14 1000 20 PB.9961.2 chr16 + 2876 17 novel_in_catalog RGS9 novel NA NA NA NA combination_of_known_junctions FALSE canonical 36 150 790 88.20997676 5 2 0 FALSE 0 0 NA A coding 484 1452 146 1597 20 PB.5291.6 chr8 - 5846 1 genic_intron novelGene_834 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 11 NA FALSE 0 0 NA A non_coding NA NA NA NA 40 PB.11707.1 chr20 + 2672 1 genic_intron novelGene_1410 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA A coding 142 426 2247 2672 65 PB.2495.1 chr3 - 2863 5 full-splice_match C3H7orf60 rna13466 3946 5 70 1013 multi-exon FALSE canonical 47 482 251 27.8567765544 5 1 0 FALSE 0 0 NA C coding 405 1215 92 1306 55 PB.5291.1 chr8 - 3114 5 full-splice_match RAB11FIP1 rna28783 5941 5 24 2803 multi-exon FALSE canonical 36 260 415 180.983424655 16 0 0 FALSE 0 0 NA C coding 649 1947 45 1991 60 PB.5291.2 chr8 - 6099 6 full-splice_match RAB11FIP1 rna28782 7821 6 16 1706 multi-exon FALSE canonical 26 122 1676 254.905864978 8 2 0 FALSE 0 0 NA C coding 1275 3825 55 3879 40 PB.11147.1 chr19 + 1957 5 novel_not_in_catalog LOC720236 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 25 58 361 152.574571931 2 7 1 FALSE 0 0 NA A coding 456 1368 220 1587 35 PB.11089.3 chr19 - 941 3 antisense novelGene_RPS11_AS novel NA NA NA NA no_subcategory FALSE canonical 16 27 567 9.48683298051 2 1 0 FALSE 0 0 NA B coding 213 639 270 908 45 PB.11089.2 chr19 - 1555 2 antisense novelGene_RPS11_AS novel NA NA NA NA no_subcategory FALSE canonical 24 46 1334 NA 2 0 0 FALSE 0 0 NA B coding 108 324 185 508 45 PB.11089.1 chr19 - 1931 1 antisense novelGene_RPS11_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 8 0 NA FALSE 0 0 NA B coding 108 324 185 508 45 PB.4227.13 chr6 + 2782 1 genic_intron novelGene_2299 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A coding 123 369 592 960 90 PB.2038.9 chr3 - 2678 14 novel_not_in_catalog MX2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 11 19 38 218.077967709 2 1 0 FALSE 0 0 NA C coding 715 2145 110 2254 30 PB.11089.4 chr19 - 1315 2 antisense novelGene_RPS11_AS novel NA NA NA NA no_subcategory FALSE canonical 16 27 567 NA 2 2 0 FALSE 0 0 NA B coding 184 552 270 821 45 PB.4649.3 chr7 + 1647 12 full-splice_match CLK3 rna25118 1723 12 -11 87 multi-exon FALSE canonical 19 28 409 382.311391408 2 1 0 FALSE 0 0 NA C coding 269 807 607 1413 20 PB.2038.5 chr3 - 2816 15 novel_not_in_catalog MX2 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 2 2 29 272.902913139 7 0 0 FALSE 0 0 NA C coding 715 2145 246 2390 25 PB.2038.6 chr3 - 2756 14 full-splice_match MX2 rna10919 3142 14 103 283 multi-exon FALSE canonical 11 17 116 218.547477679 11 0 0 FALSE 0 0 NA C coding 715 2145 188 2332 30 PB.8297.2 chr14 - 1912 2 full-splice_match FADD rna44900 2104 2 503 -311 multi-exon FALSE canonical 35 84 430 NA 5 1 0 FALSE 0 0 NA A coding 207 621 145 765 90 PB.4727.1 chr7 - 1857 6 full-splice_match AP3S2 rna25578 1094 6 -32 -731 multi-exon FALSE canonical 45 724 240 75.9210115844 34 2 0 FALSE 0 0 NA A coding 193 579 80 658 20 PB.10940.1 chr19 - 1161 10 full-splice_match ECH1 rna59105 1386 10 214 11 multi-exon FALSE canonical 42 387 725 333.469638798 16 1 0 FALSE 0 0 NA C coding 320 960 19 978 45 PB.2038.2 chr3 - 2699 14 full-splice_match MX2 rna10917 3069 14 89 281 multi-exon FALSE canonical 33 255 57 165.873445735 220 0 0 FALSE 0 0 NA C coding 715 2145 129 2273 25 PB.7734.1 chr12 + 3720 1 novel_in_catalog CCL20 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.142.1 chr1 + 2532 1 genic_intron novelGene_455 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.3060.1 chr4 - 2024 5 novel_in_catalog EPHA7 novel NA NA NA NA combination_of_known_junctions FALSE canonical 20 176 310 38.2099463491 2 0 0 FALSE 0 0 NA A coding 449 1347 214 1560 95 PB.10960.8 chr19 - 4594 13 incomplete-splice_match FCGBP rna59195 12548 27 7941 13 5prime_fragment FALSE canonical 10 11 3577 37 31 4 0 FALSE 0 0 NA B coding 1474 4422 19 4440 30 PB.10960.9 chr19 - 4349 11 incomplete-splice_match FCGBP rna59195 12548 27 8186 13 5prime_fragment FALSE canonical 10 11 3332 39.5474398666 40 0 0 FALSE 0 0 NA B coding 1186 3558 638 4195 30 PB.5271.1 chr8 + 3101 15 full-splice_match ELP3 rna28637 2572 15 -1 -528 multi-exon FALSE canonical 44 740 1654 196.880674521 67 0 0 FALSE 0 0 NA A coding 547 1641 88 1728 45 PB.8995.4 chr15 + 3040 9 novel_in_catalog SLC2A6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 12 19 1359 44.3846820423 5 1 0 FALSE 0 0 NA B coding 408 1224 883 2106 25 PB.8995.5 chr15 + 2829 10 novel_not_in_catalog SLC2A6 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 940 45.8802789878 19 2 0 FALSE 0 0 NA B coding 301 903 997 1899 30 PB.8995.6 chr15 + 3108 9 novel_not_in_catalog SLC2A6 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1435 45.9782557303 2 14 0 FALSE 0 0 NA B coding 226 678 1500 2177 30 PB.10960.6 chr19 - 4045 10 incomplete-splice_match FCGBP rna59195 12548 27 8490 13 5prime_fragment TRUE canonical 10 11 3028 41.5571895104 41 0 0 FALSE 0 0 NA B coding 1186 3558 334 3891 30 PB.2399.1 chr3 - 4296 24 novel_not_in_catalog TECPR1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 3149 55.6327241828 2 18 0 TRUE 0 0 NA B coding 586 1758 1730 3487 90 PB.8995.2 chr15 + 2756 10 novel_not_in_catalog SLC2A6 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1412 46.2276973253 2 9 0 FALSE 0 0 NA B coding 194 582 38 619 25 PB.2626.1 chr3 - 2899 4 full-splice_match ZNF786 rna14133 2938 4 31 8 multi-exon FALSE canonical 14 24 127 13.1148770486 4 0 0 FALSE 0 0 NA A coding 781 2343 110 2452 40 PB.3827.7 chr6 + 1581 1 intergenic novelGene_234 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 8 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.3827.5 chr6 + 3476 25 novel_in_catalog MARCH6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 1129 1879 312.211466798 5 0 0 FALSE 0 0 NA C coding 842 2526 188 2713 65 PB.3827.4 chr6 + 2807 1 genic_intron novelGene_230 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.3827.2 chr6 + 2777 22 novel_in_catalog MARCH6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 618 194 394.323471277 4 1 0 FALSE 0 0 NA C coding 772 2316 176 2491 70 PB.3827.1 chr6 + 3027 25 novel_in_catalog MARCH6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 1129 1879 312.211466798 79 0 0 FALSE 0 0 NA C coding 842 2526 188 2713 15 PB.8757.1 chr14 + 1590 2 full-splice_match PRSS23 rna47546 1318 2 -4 -268 multi-exon FALSE canonical 17 56 58 NA 50 1 0 FALSE 0 0 NA A coding 383 1149 72 1220 45 PB.5763.1 chr9 - 878 2 full-splice_match C9H10orf10 rna31278 984 2 98 8 multi-exon FALSE canonical 31 295 192 NA 4 0 0 FALSE 0 0 NA A coding 212 636 218 853 20 PB.3047.1 chr4 - 1782 20 full-splice_match RARS2 rna16733 1838 20 47 9 multi-exon FALSE canonical 41 240 1669 117.940663047 4 0 0 FALSE 0 0 NA A coding 578 1734 20 1753 35 PB.613.1 chr1 + 1132 7 full-splice_match ATP5F1 rna3317 1310 7 119 59 multi-exon FALSE canonical 48 6233 110 913.831494314 24 0 0 FALSE 0 0 NA C coding 256 768 34 801 40 PB.613.2 chr1 + 2592 1 novel_in_catalog ATP5F1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.3731.2 chr5 - 4080 8 novel_not_in_catalog TMEM154 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 3867 540.479416814 5 1 0 TRUE 0 0 NA C coding 183 549 65 613 30 PB.3966.3 chr6 + 3165 17 incomplete-splice_match BDP1 rna21598 8307 40 54 5088 3prime_fragment FALSE canonical 46 579 1274 201.181510085 2 9 0 FALSE 0 0 NA B coding 986 2958 206 3163 55 PB.10467.1 chr18 - 1721 9 novel_in_catalog MYO5B novel NA NA NA NA combination_of_known_junctions TRUE canonical 17 151 821 88.2269800005 9 0 0 FALSE 0 0 NA A coding 418 1254 260 1513 35 PB.3966.1 chr6 + 1589 10 novel_not_in_catalog BDP1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1284 326.269826984 14 3 0 FALSE 0 0 NA B coding 361 1083 216 1298 75 PB.9529.1 chr16 + 1391 7 full-splice_match MPDU1 rna51763 1383 7 4 -12 multi-exon FALSE canonical 48 701 522 248.809163818 9 1 0 FALSE 0 0 NA A coding 247 741 16 756 45 PB.3731.9 chr5 - 3610 1 genic_intron novelGene_2361 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.3731.8 chr5 - 1471 1 genic_intron novelGene_2360 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.2877.1 chr4 - 1519 5 full-splice_match TAF11 rna15726 1425 5 -58 -36 multi-exon FALSE canonical 43 398 412 87.5042856093 17 0 0 FALSE 0 0 NA A coding 211 633 93 725 15 PB.848.1 chr1 - 2496 4 full-splice_match SH2D1B rna4656 2521 4 12 13 multi-exon FALSE canonical 16 38 473 6.5574385243 2 2 0 FALSE 0 0 NA A coding 132 396 111 506 30 PB.9172.4 chr15 + 3272 1 genic KIAA0368 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.1064.1 chr1 - 1485 3 novel_in_catalog TOR3A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 0 0 331 180 2 1 0 FALSE 0 0 NA C coding 99 297 408 704 25 PB.8038.1 chr13 + 2965 5 novel_not_in_catalog EHBP1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 9 10 21 405.688303997 4 6 0 FALSE 0 0 NA A coding 106 318 314 631 75 PB.8622.1 chr14 + 3791 6 full-splice_match RNF141 rna46799 3852 6 53 8 multi-exon FALSE canonical 42 588 68 641.488113686 23 0 0 FALSE 0 0 NA A coding 230 690 120 809 40 PB.1677.3 chr2 - 3311 3 novel_in_catalog LOC700215 novel NA NA NA NA combination_of_known_junctions FALSE canonical 22 47 346 23 6 2 0 FALSE 0 0 NA C coding 180 540 68 607 85 PB.1964.2 chr2 + 3178 29 full-splice_match OPA1 rna10503 6053 29 59 2816 multi-exon FALSE canonical 42 408 202 400.852840828 2 0 0 FALSE 0 0 NA C coding 960 2880 171 3050 40 PB.5559.2 chr8 + 2904 1 genic_intron novelGene_2173 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.9172.2 chr15 + 3027 1 novel_in_catalog KIAA0368 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 10 NA FALSE 0 0 NA C non_coding NA NA NA NA 55 PB.805.1 chr1 + 2493 11 full-splice_match IFI16 rna4450 2627 11 208 -74 multi-exon FALSE canonical 46 1885 1966 333.324166541 511 3 0 FALSE 0 0 NA A coding 729 2187 50 2236 30 PB.805.7 chr1 + 3893 1 genic_intron novelGene_2226 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A coding 123 369 936 1304 45 PB.1347.1 chr2 - 5592 1 novel_in_catalog SEMA5B novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 5 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.1611.2 chr2 + 1817 1 antisense novelGene_LIMD1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA B coding 279 837 807 1643 70 PB.7160.2 chr11 - 2821 1 antisense novelGene_PLXNC1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A coding 108 324 192 515 90 PB.5081.1 chr7 - 2717 12 novel_in_catalog TC2N novel NA NA NA NA combination_of_known_junctions FALSE canonical 28 116 388 184.436981107 2 4 0 FALSE 0 0 NA B coding 219 657 444 1100 35 PB.10967.2 chr19 + 2346 18 full-splice_match SHKBP1 rna59251 2393 18 43 4 multi-exon FALSE canonical 13 21 1768 101.252160471 21 0 0 FALSE 0 0 NA C coding 707 2121 1 2121 20 PB.6575.10 chr10 + 2717 9 incomplete-splice_match CYTH4 rna35904 3121 13 411 -7 internal_fragment FALSE canonical 36 384 501 67.8011799307 7 7 0 FALSE 0 0 NA C coding 232 696 180 875 15 PB.10351.1 chr17 + 2981 2 full-splice_match ABHD13 rna55870 5329 2 115 2233 multi-exon FALSE canonical 41 195 161 NA 17 1 0 FALSE 0 0 NA A coding 337 1011 182 1192 65 PB.255.1 chr1 + 4759 11 full-splice_match TXLNA rna1281 5820 11 1058 3 multi-exon FALSE canonical 36 176 229 387.502258058 5 2 0 FALSE 0 0 NA C coding 546 1638 61 1698 10 PB.9243.1 chr15 - 2599 2 full-splice_match ALDH1B1 rna50130 2694 2 91 4 multi-exon FALSE canonical 20 168 65 NA 11 2 0 FALSE 0 0 NA A coding 517 1551 76 1626 30 PB.4743.2 chr7 + 4431 22 full-splice_match BLM rna25611 4505 22 66 8 multi-exon FALSE canonical 37 171 95 121.412519947 2 0 0 FALSE 0 0 NA C coding 1416 4248 100 4347 30 PB.4743.1 chr7 + 1628 7 incomplete-splice_match BLM rna25611 4505 22 66 2811 3prime_fragment FALSE canonical 37 171 95 115.399306757 3 0 0 FALSE 0 0 NA C coding 509 1527 100 1626 65 PB.7276.8 chr11 + 1306 1 incomplete-splice_match OAS2 rna39416 4711 10 3403 3 mono-exon FALSE canonical NA NA NA NA 10 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 15 PB.5133.5 chr7 + 3457 1 genic_intron novelGene_2470 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA A coding 143 429 360 788 80 PB.8103.1 chr13 - 2179 1 novel_in_catalog MOB1A novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 16 6 NA FALSE 0 0 NA C non_coding NA NA NA NA 70 PB.7276.2 chr11 + 3760 7 incomplete-splice_match OAS2 rna39416 4711 10 947 4 internal_fragment FALSE canonical 36 302 1155 179.178681768 4 0 0 FALSE 0 0 NA C coding 422 1266 56 1321 15 PB.7276.1 chr11 + 4491 10 full-splice_match OAS2 rna39416 4711 10 218 2 multi-exon FALSE canonical 36 302 1884 158.883605196 35 12 0 FALSE 0 0 NA C coding 651 1953 98 2050 15 PB.8103.2 chr13 - 1307 6 full-splice_match MOB1A rna43869 3971 6 115 2549 multi-exon FALSE canonical 48 2251 192 638.507635037 122 0 0 FALSE 0 0 NA C coding 216 648 179 826 35 PB.7276.7 chr11 + 2691 2 incomplete-splice_match OAS2 rna39416 4711 10 2016 4 internal_fragment FALSE canonical 36 302 86 NA 7 0 0 FALSE 0 0 NA C non_coding NA NA NA NA 15 PB.6562.1 chr10 - 1432 13 novel_in_catalog RBFOX2 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical 0 0 934 432.968821048 5 0 0 FALSE 0 0 NA A coding 375 1125 199 1323 85 PB.3837.1 chr6 - 1424 7 full-splice_match FAM134B rna20904 3310 7 233 1653 multi-exon FALSE canonical 26 1434 552 509.397683544 4 1 0 FALSE 0 0 NA A coding 356 1068 306 1373 95 PB.3525.2 chr5 - 2441 8 novel_not_in_catalog DCK novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1417 278.361276042 6 25 0 TRUE 0 0 NA C coding 260 780 149 928 35 PB.3541.5 chr5 + 1166 3 full-splice_match HOPX rna19214 1059 3 -115 8 multi-exon FALSE canonical 32 171 213 1054 2 3 0 FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.3390.1 chr5 - 5920 1 genic_intron novelGene_562 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A coding 110 330 2943 3272 90 PB.7355.1 chr11 - 4262 1 genic_intron novelGene_2114 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA A coding 99 297 371 667 90 PB.5689.1 chr9 - 3191 15 novel_not_in_catalog DCLRE1C novel NA NA NA NA any annotated donor/acceptor FALSE canonical 13 13 2114 120.685541802 10 1 0 TRUE 0 0 NA C coding 696 2088 86 2173 80 PB.4267.1 chr6 + 2439 4 full-splice_match GM2A rna23077 2540 4 100 1 multi-exon FALSE canonical 45 454 112 164.824148716 14 2 0 FALSE 0 0 NA C coding 190 570 32 601 10 PB.10793.2 chr19 - 1424 1 genic_intron novelGene_379 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.10477.1 chr18 - 1138 8 full-splice_match TXNL1 rna56754 1324 8 113 73 multi-exon FALSE canonical 46 934 238 504.314386073 18 1 0 FALSE 0 0 NA A coding 289 867 141 1007 20 PB.1508.1 chr2 + 2755 4 incomplete-splice_match PBRM1 rna8137 8473 31 5215 503 internal_fragment FALSE canonical 41 142 88 124.040316027 2 1 0 FALSE 0 0 NA B coding 180 540 7 546 80 PB.43.1 chr1 - 3094 15 novel_in_catalog PLEKHG5 novel NA NA NA NA combination_of_known_junctions FALSE canonical 16 33 461 93.2684298142 6 2 0 FALSE 0 0 NA A coding 798 2394 282 2675 30 PB.10814.2 chr19 + 1251 1 incomplete-splice_match LOC719980 rna58304 2763 7 1507 6 mono-exon FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.9360.18 chr15 - 2826 1 genic_intron novelGene_1617 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.10814.1 chr19 + 3366 12 fusion LOC106994663_LOC719980 novel NA NA NA NA no_subcategory FALSE canonical 0 0 40 111.7855089 7 15 0 FALSE 0 0 NA A coding 479 1437 209 1645 20 PB.2162.1 chr3 - 2454 16 full-splice_match POR rna11581 2460 16 30 -24 multi-exon FALSE canonical 27 135 1295 728.389318977 4 0 0 FALSE 0 0 NA C coding 680 2040 48 2087 10 PB.3153.2 chr4 - 5781 39 incomplete-splice_match UTRN rna17133 12611 75 107 6723 internal_fragment FALSE canonical 36 218 215 834.79218971 3 8 0 FALSE 0 0 NA B coding 1824 5472 308 5779 70 PB.5471.2 chr8 + 2775 2 novel_in_catalog POLR2K novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 3449 761 NA 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA 30 PB.2162.3 chr3 - 2493 16 full-splice_match POR rna11580 2515 16 17 5 multi-exon FALSE canonical 27 135 1334 702.672754559 13 2 0 FALSE 0 0 NA C coding 677 2031 96 2126 10 PB.9626.2 chr16 - 1657 10 full-splice_match ALDOC rna52296 1716 10 48 11 multi-exon FALSE canonical 24 1099 94 2464.43421499 2 4 1 FALSE 0 0 NA C coding 364 1092 163 1254 30 PB.3859.1 chr6 + 1768 9 incomplete-splice_match NIPBL rna21103 9272 46 7100 404 internal_fragment FALSE canonical 47 537 1332 239.115035077 2 0 0 FALSE 0 0 NA B coding 557 1671 25 1695 75 PB.7108.1 chr11 - 1514 1 incomplete-splice_match PTPRB rna38569 12172 32 6874 3785 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 55 PB.9626.1 chr16 - 1604 9 full-splice_match ALDOC rna52295 1978 9 362 12 multi-exon FALSE canonical 30 3210 98 1808.64479653 11 1 0 FALSE 0 0 NA C coding 364 1092 111 1202 30 PB.4731.1 chr7 - 1734 11 full-splice_match IDH2 rna25582 1734 11 -13 13 multi-exon FALSE canonical 42 1687 214 2225.32694227 104 0 0 FALSE 0 0 NA C coding 452 1356 100 1455 25 PB.4731.2 chr7 - 1455 9 novel_not_in_catalog IDH2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 199 2422.98988855 2 3 1 FALSE 0 0 NA C coding 322 966 210 1175 25 PB.4731.3 chr7 - 2570 1 genic_intron novelGene_1357 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A coding 107 321 1377 1697 80 PB.7578.2 chr12 - 3051 21 novel_not_in_catalog CWC22 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 275 405.117266973 30 7 1 TRUE 0 0 NA A coding 843 2529 265 2793 20 PB.891.1 chr1 - 2067 1 genic_intron novelGene_2307 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.2058.1 chr3 - 1241 3 full-splice_match LOC699655 rna11003 1272 3 22 9 multi-exon FALSE canonical 48 2126 420 301.499585406 8 0 0 FALSE 0 0 NA A coding 277 831 132 962 25 PB.7884.2 chr13 - 3524 19 novel_in_catalog HADHA novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 2159 2993 675.044442981 3 2 0 FALSE 0 0 NA C coding 571 1713 60 1772 5 PB.7884.1 chr13 - 2698 20 full-splice_match HADHA rna42775 2721 20 24 -1 multi-exon FALSE canonical 47 2159 2169 657.26630828 221 2 0 FALSE 0 0 NA C coding 763 2289 24 2312 5 PB.2000.5 chr3 + 2846 16 novel_in_catalog MCM3AP novel NA NA NA NA combination_of_known_junctions FALSE canonical 35 118 700 206.997584527 2 1 0 FALSE 0 0 NA C coding 804 2412 297 2708 20 PB.8780.9 chr14 - 2535 1 genic_intron novelGene_1690 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.3028.1 chr4 - 1186 1 intergenic novelGene_1528 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A coding 100 300 94 393 75 PB.10185.2 chr17 - 3101 2 novel_in_catalog N4BP2L2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 3233 2722 NA 5 7 0 FALSE 0 0 NA B non_coding NA NA NA NA 30 PB.2000.1 chr3 + 6693 29 full-splice_match MCM3AP rna10712 6585 29 -112 4 multi-exon FALSE canonical 34 96 3854 200.81334617 2 44 0 FALSE 0 0 NA C coding 1980 5940 621 6560 25 PB.10185.4 chr17 - 1695 1 genic_intron novelGene_282 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.2000.2 chr3 + 6264 29 full-splice_match MCM3AP rna10708 6332 29 62 6 multi-exon FALSE canonical 24 46 85 206.460650004 5 0 0 FALSE 0 0 NA C coding 1980 5940 194 6133 20 PB.215.2 chr1 + 1611 7 novel_not_in_catalog TMEM222 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 206 324.910756978 5 12 0 TRUE 0 0 NA C coding 112 336 320 655 10 PB.8780.1 chr14 - 6231 6 full-splice_match MAML2 rna47702 4009 6 40 -2262 multi-exon FALSE canonical 24 60 298 56.338264084 2 2 0 FALSE 0 0 NA A coding 1151 3453 423 3875 40 PB.3337.1 chr5 + 3250 19 full-splice_match MAN2B2 rna18194 4214 19 31 933 multi-exon FALSE canonical 21 31 1415 107.382493918 75 2 0 FALSE 0 0 NA A coding 1009 3027 11 3037 15 PB.215.1 chr1 + 1448 6 full-splice_match TMEM222 rna1062 1624 6 172 4 multi-exon FALSE canonical 41 448 64 143.237564905 26 0 0 FALSE 0 0 NA C coding 164 492 3 494 10 PB.6397.2 chr10 - 2908 3 novel_in_catalog MKKS novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 280 65 515 4 0 0 FALSE 0 0 NA C coding 356 1068 714 1781 90 PB.3266.1 chr4 - 1759 1 genic_intron novelGene_2439 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.8780.6 chr14 - 1335 1 genic_intron novelGene_1684 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.8780.7 chr14 - 2887 1 genic_intron novelGene_1685 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 14 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.5172.83 chr7 + 1882 10 fusion LOC711872_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 97 3167.50027624 3 7 0 TRUE 0 0 NA B coding 375 1125 636 1760 35 PB.5172.82 chr7 + 1550 9 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 188 3502.74991971 2 9 0 TRUE 0 0 NA B coding 466 1398 17 1414 15 PB.664.1 chr1 - 3020 12 novel_not_in_catalog TXNIP novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2996 6180.62359313 2 0 0 TRUE 0 0 NA B coding 391 1173 320 1492 10 PB.5172.80 chr7 + 1568 11 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 188 3346.43198048 4 13 0 TRUE 0 0 NA B coding 196 588 844 1431 15 PB.11440.2 chr20 + 1479 8 novel_in_catalog PPP4C novel NA NA NA NA combination_of_known_junctions FALSE canonical 27 47 85 517.376072118 2 3 0 FALSE 0 0 NA C coding 187 561 149 709 10 PB.11440.3 chr20 + 1611 8 novel_in_catalog PPP4C novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 968 467 240.291489654 2 2 0 FALSE 0 0 NA C coding 307 921 370 1290 5 PB.5172.85 chr7 + 1495 7 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 376 2327.80368588 2 10 0 TRUE 0 0 NA B coding 245 735 716 1450 20 PB.11440.1 chr20 + 1389 9 full-splice_match PPP4C rna61858 1235 9 -44 -110 multi-exon FALSE canonical 27 47 83 501.50373877 63 1 0 FALSE 0 0 NA C coding 307 921 147 1067 10 PB.5172.89 chr7 + 1937 10 fusion LOC711872_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 97 3167.50027624 2 9 0 TRUE 0 0 NA B coding 473 1419 399 1817 35 PB.2541.2 chr3 - 2821 24 full-splice_match COPG2 rna13755 3127 24 15 291 multi-exon FALSE canonical 44 366 1537 167.161598461 39 2 0 FALSE 0 0 NA A coding 871 2613 70 2682 30 PB.10718.1 chr19 - 3563 1 genic RAB3D novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 6 0 NA FALSE 0 0 NA C coding 108 324 909 1232 25 PB.7311.1 chr11 - 1069 8 full-splice_match RPLP0 rna39536 1208 8 100 39 multi-exon FALSE canonical 42 9354 29 8360.9804449 110 0 0 FALSE 0 0 NA A coding 318 954 78 1031 60 PB.2532.1 chr3 + 3156 11 novel_not_in_catalog NRF1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 86 195.240876868 3 5 0 TRUE 0 0 NA A coding 503 1509 97 1605 30 PB.10718.2 chr19 - 1508 5 full-splice_match RAB3D rna57862 1141 5 21 -388 multi-exon FALSE canonical 36 156 178 139.481181526 8 0 0 FALSE 0 0 NA C coding 219 657 240 896 40 PB.3731.10 chr5 - 1718 3 novel_in_catalog TMEM154 novel NA NA NA NA combination_of_known_junctions FALSE canonical 33 498 97 528 2 0 0 FALSE 0 0 NA C coding 139 417 34 450 75 PB.10699.2 chr19 - 3468 13 full-splice_match RAVER1 rna57767 3584 13 104 12 multi-exon FALSE canonical 4 4 1281 38.9871773792 34 1 0 FALSE 0 0 NA A coding 739 2217 21 2237 40 PB.7016.6 chr11 + 1517 5 novel_in_catalog MYL6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 42 8917 1328 5278.71300603 2 0 0 FALSE 0 0 NA C coding 116 348 1007 1354 0 PB.2884.1 chr4 + 686 6 full-splice_match RPL10A rna15774 715 6 24 5 multi-exon FALSE canonical 44 6551 12 7549.33189097 3 0 0 FALSE 0 0 NA A coding 217 651 8 658 5 PB.5205.1 chr8 - 2891 1 genic_intron novelGene_285 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11450.1 chr20 + 2528 2 full-splice_match C20H16orf54 rna61901 2737 2 201 8 multi-exon FALSE canonical 13 25 58 NA 55 6 0 FALSE 0 0 NA A coding 224 672 59 730 50 PB.6107.1 chr9 - 2991 3 full-splice_match CLRN3 rna33317 3037 3 28 18 multi-exon FALSE canonical 2 95 366 13 2 1 0 FALSE 0 0 NA A coding 226 678 138 815 25 PB.3184.2 chr4 - 3397 1 genic_intron novelGene_2195 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 6 NA FALSE 0 0 NA A coding 128 384 3014 3397 90 PB.11873.4 chrX + 3919 27 novel_in_catalog HDAC6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 28 116 1699 246.335137567 2 2 0 FALSE 0 0 NA C coding 1160 3480 74 3553 35 PB.10062.1 chr16 - 1550 1 intergenic novelGene_1458 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.308.1 chr1 + 2719 1 genic AKIRIN1 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11873.1 chrX + 4067 29 full-splice_match HDAC6 rna63854 4202 29 115 20 multi-exon TRUE canonical 28 116 1854 265.768696426 11 2 0 FALSE 0 0 NA C coding 1160 3480 229 3708 55 PB.11873.2 chrX + 4080 29 novel_in_catalog HDAC6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 21 39 46 271.175220107 3 0 0 FALSE 0 0 NA C coding 1160 3480 242 3721 55 PB.11873.3 chrX + 4055 29 novel_in_catalog HDAC6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 25 62 20 269.816604382 2 5 0 FALSE 0 0 NA C coding 1160 3480 216 3695 55 PB.12190.1 chrUn_NW_014893179v1 - 1037 1 intergenic novelGene_13 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 51 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 40 PB.4414.2 chr7 - 1488 10 full-splice_match KATNBL1 rna23921 2757 10 19 1250 multi-exon FALSE canonical 46 243 144 231.695921414 25 4 0 FALSE 0 0 NA C coding 304 912 159 1070 80 PB.4414.5 chr7 - 3414 1 novel_in_catalog KATNBL1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 14 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.4414.6 chr7 - 3372 5 novel_in_catalog KATNBL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 243 145 330.649361106 2 4 0 FALSE 0 0 NA C coding 186 558 160 717 90 PB.4853.3 chr7 + 3694 1 incomplete-splice_match ARHGAP5 rna26298 7589 7 254 3642 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA B coding 1103 3309 384 3692 65 PB.4853.2 chr7 + 4002 2 novel_in_catalog ARHGAP5 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 578 133 NA 3 1 0 FALSE 0 0 NA B coding 1232 3696 305 4000 65 PB.4853.1 chr7 + 3910 2 incomplete-splice_match ARHGAP5 rna26298 7589 7 33 3646 3prime_fragment FALSE canonical 42 499 46 NA 4 2 0 FALSE 0 0 NA B coding 1231 3693 218 3910 70 PB.1359.1 chr2 - 2501 14 full-splice_match SNX4 rna7250 2520 14 6 13 multi-exon FALSE canonical 44 517 171 386.455689569 21 0 0 FALSE 0 0 NA A coding 450 1350 31 1380 20 PB.4314.3 chr6 - 3181 1 genic_intron novelGene_2523 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A coding 222 666 1575 2240 80 PB.3823.1 chr6 - 5700 1 genic_intron novelGene_217 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 23 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.5698.2 chr9 - 1670 2 novel_not_in_catalog LOC107000055 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 4 4 543 NA 2 3 0 FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.4434.2 chr7 - 1438 4 full-splice_match C7H15orf57 rna24067 784 4 37 -691 multi-exon FALSE canonical 23 58 59 273.173937263 2 1 0 FALSE 0 0 NA C coding 185 555 72 626 30 PB.1258.3 chr2 - 3696 20 novel_not_in_catalog CBLB novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2552 326.843999486 5 6 0 TRUE 0 0 NA C coding 773 2319 239 2557 15 PB.4434.1 chr7 - 1614 4 full-splice_match C7H15orf57 rna24066 1721 4 98 9 multi-exon FALSE canonical 48 475 236 103.812330674 37 0 0 FALSE 0 0 NA C coding 185 555 249 803 30 PB.986.1 chr1 + 2785 16 novel_in_catalog KDM5B novel NA NA NA NA combination_of_known_junctions FALSE canonical 35 458 369 261.388599598 2 0 0 FALSE 0 0 NA C coding 780 2340 166 2505 45 PB.5138.1 chr7 - 1928 11 full-splice_match WARS rna27711 2569 11 496 145 multi-exon FALSE canonical 44 422 51 354.647712526 94 1 0 FALSE 0 0 NA C coding 475 1425 115 1539 40 PB.1258.7 chr2 - 3655 19 full-splice_match CBLB rna6856 6648 19 -4 2997 multi-exon FALSE canonical 28 67 2103 325.270656531 8 0 0 FALSE 0 0 NA C coding 982 2946 145 3090 75 PB.1258.6 chr2 - 3471 18 novel_not_in_catalog CBLB novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 2372 337.344038038 2 1 0 TRUE 0 0 NA C coding 764 2292 88 2379 75 PB.1258.9 chr2 - 1924 1 genic_intron novelGene_606 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.1258.8 chr2 - 3770 19 full-splice_match CBLB rna6855 6824 19 54 3000 multi-exon FALSE canonical 28 67 2221 322.51821654 5 0 0 FALSE 0 0 NA C coding 982 2946 263 3208 80 PB.1206.2 chr1 + 1537 13 novel_not_in_catalog SCCPDH novel NA NA NA NA any annotated donor/acceptor FALSE canonical 11 18 1282 1130.22785313 2 5 0 TRUE 0 0 NA B coding 289 867 427 1293 20 PB.5138.8 chr7 - 2634 12 novel_not_in_catalog WARS novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 43 519.776875207 2 2 0 TRUE 0 0 NA C coding 475 1425 136 1560 0 PB.718.6 chr1 - 3520 11 full-splice_match RFX5 rna3855 3594 11 63 11 multi-exon FALSE canonical 41 322 111 221.305219098 16 4 0 FALSE 0 0 NA C coding 620 1860 125 1984 25 PB.718.4 chr1 - 3596 11 full-splice_match RFX5 rna3857 3616 11 18 2 multi-exon FALSE canonical 27 87 60 271.462704621 3 1 0 FALSE 0 0 NA C coding 620 1860 192 2051 5 PB.9827.1 chr16 + 3094 1 novel_in_catalog RAPGEFL1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A coding 134 402 2103 2504 90 PB.718.3 chr1 - 3593 11 full-splice_match RFX5 rna3863 2814 11 -29 -750 multi-exon FALSE canonical 41 375 177 211.950465911 25 3 0 FALSE 0 0 NA C coding 620 1860 191 2050 10 PB.5118.11 chr7 + 2850 7 incomplete-splice_match PAPOLA rna27669 4399 22 1543 6 internal_fragment FALSE canonical 48 1596 570 428.513710399 7 1 0 FALSE 0 0 NA C coding 265 795 7 801 30 PB.11153.3 chr19 - 3561 4 novel_not_in_catalog ZNF320 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 633 353.951974143 2 0 0 FALSE 0 0 NA B coding 481 1443 707 2149 35 PB.664.4 chr1 - 2800 8 novel_not_in_catalog TXNIP novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 1101 4851.15316188 4 1 0 TRUE 0 0 NA B coding 275 825 320 1144 50 PB.8830.5 chr14 - 6227 1 novel_in_catalog USP28 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 8 NA FALSE 0 0 NA B non_coding NA NA NA NA 85 PB.11153.2 chr19 - 3131 4 novel_in_catalog ZNF320 novel NA NA NA NA combination_of_known_junctions FALSE canonical 38 153 146 287.48217336 7 3 0 FALSE 0 0 NA B coding 481 1443 220 1662 35 PB.5330.2 chr8 - 6107 32 incomplete-splice_match PRKDC rna28986 13476 86 7365 4 5prime_fragment TRUE canonical 40 609 4066 437.351117525 4 2 0 FALSE 0 0 NA B coding 1656 4968 87 5054 30 PB.3188.3 chr4 + 3025 16 novel_in_catalog HBS1L novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1386 1725 294.241397495 2 2 0 FALSE 0 0 NA C coding 633 1899 129 2027 80 PB.5330.1 chr8 - 1703 4 incomplete-splice_match PRKDC rna28985 13383 85 11673 7 5prime_fragment FALSE canonical 46 1289 311 236.376817814 3 0 0 FALSE 0 0 NA B coding 200 600 54 653 30 PB.5330.6 chr8 - 6574 35 incomplete-splice_match PRKDC rna28985 13383 85 6802 7 5prime_fragment FALSE canonical 40 433 4629 460.382449709 2 2 0 FALSE 0 0 NA B coding 1817 5451 74 5524 30 PB.11153.1 chr19 - 3173 4 novel_not_in_catalog ZNF320 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 25 49 186 332.407881976 2 5 0 FALSE 0 0 NA B coding 481 1443 260 1702 35 PB.2277.3 chr3 + 1399 1 genic_intron novelGene_1500 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.3188.2 chr4 + 2714 5 full-splice_match HBS1L rna17319 2809 5 84 11 multi-exon FALSE canonical 48 428 558 736.598262284 6 3 0 FALSE 0 0 NA C coding 632 1896 129 2024 35 PB.11248.1 chr20 + 1175 11 full-splice_match GNPTG rna60980 1131 11 9 -53 multi-exon FALSE canonical 30 64 62 319.795246994 2 7 0 FALSE 0 0 NA A coding 305 915 11 925 20 PB.11009.1 chr19 - 1682 1 intergenic novelGene_841 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.10875.1 chr19 + 3051 20 full-splice_match GPATCH1 rna58642 3356 20 297 8 multi-exon FALSE canonical 32 68 2532 76.1642960973 16 2 0 FALSE 0 0 NA C coding 932 2796 9 2804 10 PB.3188.1 chr4 + 2815 18 full-splice_match HBS1L rna17317 6452 18 88 3549 multi-exon FALSE canonical 48 1386 1721 305.090150611 144 4 0 FALSE 0 0 NA C coding 684 2052 125 2176 35 PB.10875.2 chr19 + 3019 20 novel_not_in_catalog GPATCH1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 4 4 1868 91.4275669588 2 5 0 FALSE 0 0 NA C coding 622 1866 11 1876 10 PB.8036.1 chr13 - 1545 2 genic_intron novelGene_1261 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 959 NA 8 0 0 FALSE 0 0 NA B non_coding NA NA NA NA 60 PB.11863.1 chrX + 1730 13 full-splice_match FTSJ1 rna63825 1628 13 -54 -48 multi-exon FALSE canonical 33 129 358 71.6309988762 2 0 0 FALSE 0 0 NA A coding 329 987 168 1154 30 PB.3711.1 chr5 - 3776 12 full-splice_match SLC10A7 rna20187 3801 12 14 11 multi-exon FALSE canonical 37 117 1228 121.589473229 4 1 0 FALSE 0 0 NA C coding 340 1020 236 1255 55 PB.320.1 chr1 + 6226 8 full-splice_match RLF rna1624 6250 8 22 2 multi-exon FALSE canonical 45 328 960 164.347193466 11 1 0 FALSE 0 0 NA A coding 1915 5745 14 5758 25 PB.11899.1 chrX - 5416 25 full-splice_match SMC1A rna64025 5967 25 69 482 multi-exon FALSE canonical 42 438 1965 267.125438699 50 0 0 FALSE 0 0 NA C coding 1233 3699 55 3753 15 PB.664.5 chr1 - 2703 8 novel_not_in_catalog TXNIP novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 4 6 1394 5022.53143345 15 5 0 TRUE 0 0 NA B coding 376 1128 269 1396 60 PB.8214.1 chr13 + 1382 11 full-splice_match MRPS9 rna44385 1400 11 11 7 multi-exon FALSE canonical 44 1211 505 221.440736993 36 0 0 FALSE 0 0 NA A coding 396 1188 17 1204 65 PB.4473.1 chr7 - 2770 1 full-splice_match LCMT2 rna24246 2802 1 27 5 mono-exon FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA A coding 705 2115 104 2218 20 PB.5646.1 chr9 + 3257 12 full-splice_match NET1 rna30553 3396 12 127 12 multi-exon FALSE canonical 31 138 143 965.220700151 9 6 0 FALSE 0 0 NA C coding 596 1788 16 1803 35 PB.5646.2 chr9 + 2999 10 full-splice_match NET1 rna30554 3300 10 51 250 multi-exon FALSE canonical 40 1563 1379 522.705461996 189 2 0 FALSE 0 0 NA C coding 542 1626 158 1783 45 PB.3145.1 chr4 - 4077 1 genic_intron novelGene_2045 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.3843.1 chr6 + 3901 12 full-splice_match CDH6 rna20969 8230 12 93 4236 multi-exon FALSE canonical 16 48 130 52.810983706 2 1 0 FALSE 0 0 NA A coding 790 2370 259 2628 35 PB.7290.1 chr11 - 4708 1 genic_intron novelGene_2005 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 17 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.579.1 chr1 + 2866 15 full-splice_match GPSM2 rna3165 3295 15 424 5 multi-exon FALSE canonical 28 97 79 107.698653659 2 2 0 FALSE 0 0 NA C coding 686 2058 328 2385 30 PB.4262.11 chr6 - 2834 19 novel_not_in_catalog TNIP1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 303 428.740014461 4 11 1 TRUE 0 0 NA C coding 584 1752 322 2073 30 PB.2657.6 chr3 - 7418 23 incomplete-splice_match KMT2C rna14326 15464 58 3733 4313 internal_fragment FALSE canonical 40 294 4053 376.535522893 2 1 0 FALSE 0 0 NA B coding 2465 7395 23 7417 70 PB.8092.2 chr13 + 1502 2 novel_in_catalog SMYD5 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 444 73 NA 2 3 0 FALSE 0 0 NA C non_coding NA NA NA NA 15 PB.4843.1 chr7 - 943 5 novel_in_catalog GZMH novel NA NA NA NA combination_of_known_junctions FALSE canonical 31 671 293 37.509998667 11 1 0 FALSE 0 0 NA B coding 137 411 418 828 40 PB.4843.2 chr7 - 1514 4 novel_not_in_catalog GZMH novel NA NA NA NA any annotated donor/acceptor FALSE canonical 5 5 109 339.9852938 2 1 0 FALSE 0 0 NA B coding 106 318 614 931 40 PB.4262.10 chr6 - 2609 17 novel_in_catalog TNIP1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 4 6 73 354.050843806 8 3 1 FALSE 0 0 NA C coding 584 1752 97 1848 30 PB.3484.6 chr5 + 3399 17 full-splice_match ANTXR2 rna18914 5448 17 684 1365 multi-exon FALSE canonical 43 515 241 430.024417911 108 1 0 FALSE 0 0 NA C coding 488 1464 90 1553 15 PB.3484.7 chr5 + 6008 16 novel_in_catalog ANTXR2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 515 836 443.341854555 5 5 0 FALSE 0 0 NA C coding 498 1494 685 2178 90 PB.3616.1 chr5 + 3133 17 full-splice_match BANK1 rna19524 3425 17 213 79 multi-exon FALSE canonical 32 194 126 254.615396235 40 0 0 FALSE 0 0 NA C coding 786 2358 57 2414 25 PB.7041.1 chr11 - 3060 1 novel_in_catalog R3HDM2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA B non_coding NA NA NA NA 75 PB.3616.2 chr5 + 1732 10 incomplete-splice_match BANK1 rna19524 3425 17 206 1487 3prime_fragment FALSE canonical 32 194 133 264.325556842 10 0 0 FALSE 0 0 NA C coding 556 1668 64 1731 55 PB.3484.4 chr5 + 3498 18 novel_not_in_catalog ANTXR2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 7 14 38 528.231956625 18 1 0 FALSE 0 0 NA C coding 488 1464 190 1653 15 PB.3616.7 chr5 + 2687 1 genic_intron novelGene_1822 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.8857.2 chr14 + 1437 1 genic CD3G novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 25 PB.8857.1 chr14 + 2552 7 full-splice_match CD3G rna48124 1065 7 56 -1543 multi-exon FALSE canonical 33 1071 461 208.367463871 9 2 0 FALSE 0 0 NA C coding 181 543 26 568 25 PB.3978.1 chr6 - 2878 21 full-splice_match GFM2 rna21637 2742 21 -31 -105 multi-exon FALSE canonical 41 292 178 174.206773691 13 9 0 FALSE 0 0 NA A coding 777 2331 203 2533 50 PB.7804.2 chr12 + 3404 25 novel_not_in_catalog ANO7 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 154 4.58257569496 2 4 0 FALSE 0 0 NA B coding 864 2592 53 2644 15 PB.7804.3 chr12 + 3211 26 novel_not_in_catalog ANO7 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 128 4.69041575982 2 2 0 TRUE 0 0 NA B coding 861 2583 36 2618 5 PB.7804.1 chr12 + 3260 25 novel_in_catalog ANO7 novel NA NA NA NA combination_of_known_junctions TRUE canonical 0 0 677 4.58257569496 2 3 0 FALSE 0 0 NA B coding 881 2643 76 2718 10 PB.3484.2 chr5 + 3294 17 full-splice_match ANTXR2 rna18913 4621 17 -37 1364 multi-exon FALSE canonical 24 114 135 488.114740609 6 1 0 FALSE 0 0 NA C coding 411 1233 215 1447 15 PB.8542.1 chr14 - 2989 6 full-splice_match LDLRAD3 rna46283 3894 6 67 838 multi-exon FALSE canonical 18 29 88 52.640288753 11 0 0 FALSE 0 0 NA A coding 345 1035 43 1077 80 PB.3484.3 chr5 + 5730 17 novel_not_in_catalog ANTXR2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 119 546.560152225 2 1 0 FALSE 0 0 NA C coding 498 1494 408 1901 90 PB.10760.1 chr19 + 2594 14 full-splice_match IL27RA rna58099 3077 14 181 302 multi-exon FALSE canonical 13 25 184 60.8933493906 42 0 0 FALSE 0 0 NA A coding 636 1908 85 1992 65 PB.10092.2 chr16 - 3587 9 full-splice_match FAAP100 rna54575 3646 9 50 9 multi-exon FALSE canonical 0 0 188 19.3390796058 12 1 0 FALSE 0 0 NA C coding 881 2643 24 2666 15 PB.10092.3 chr16 - 3814 9 full-splice_match FAAP100 rna54576 3837 9 13 10 multi-exon FALSE canonical 0 0 223 19.4422220952 3 3 0 FALSE 0 0 NA C coding 730 2190 705 2894 15 PB.1926.1 chr2 - 4043 8 full-splice_match GPD1L rna10333 4052 8 3 6 multi-exon FALSE canonical 40 930 247 535.592195612 96 3 0 FALSE 0 0 NA C coding 351 1053 201 1253 20 PB.1926.3 chr2 - 3006 2 novel_in_catalog GPD1L novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 930 83 NA 2 0 0 FALSE 0 0 NA C coding 117 351 37 387 75 PB.1926.2 chr2 - 3742 8 novel_not_in_catalog GPD1L novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 749 969.578258832 2 7 0 TRUE 0 0 NA C coding 207 621 75 695 20 PB.11394.10 chr20 + 3632 22 full-splice_match POLR3E rna61703 3905 22 33 240 multi-exon FALSE canonical 17 56 203 207.911038668 2 1 0 FALSE 0 0 NA C coding 739 2217 915 3131 10 PB.4016.1 chr6 + 615 3 full-splice_match LOC106998836 rna21802 863 3 18 230 multi-exon FALSE canonical 48 24244 327 614.499796583 2 0 0 FALSE 0 0 NA A non_coding NA NA NA NA 30 PB.5162.1 chr7 + 4655 23 novel_not_in_catalog INF2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 10 18 144 60.2328813855 9 6 0 FALSE 0 0 NA B coding 753 2259 1590 3848 15 PB.6588.1 chr10 - 6044 16 novel_not_in_catalog PLA2G6 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1433 82.8371897157 2 9 0 TRUE 0 0 NA A coding 352 1056 4328 5383 10 PB.7748.1 chr12 - 4329 1 genic_intron novelGene_1966 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.5172.170 chr7 + 1556 11 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 94 3346.43198048 3 13 0 TRUE 0 0 NA B coding 196 588 834 1421 15 PB.5172.171 chr7 + 1515 7 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 352 2636.9660597 2 18 0 TRUE 0 0 NA B coding 156 468 14 481 20 PB.181.8 chr1 - 4215 6 novel_not_in_catalog RUNX3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 2 493 14.6969384567 2 18 0 TRUE 0 0 NA B coding 428 1284 436 1719 40 PB.5172.173 chr7 + 1501 7 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 352 2636.9660597 2 14 0 TRUE 0 0 NA B coding 159 477 14 490 25 PB.5172.174 chr7 + 1475 10 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 200 2184.38412373 2 17 0 TRUE 0 0 NA B coding 241 723 707 1429 25 PB.5172.175 chr7 + 1520 8 fusion LOC720839_LOC711872_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 121 2640.15170019 3 18 0 TRUE 0 0 NA B coding 360 1080 391 1470 15 PB.5172.176 chr7 + 1502 7 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 377 2636.9660597 48 13 0 TRUE 0 0 NA B coding 150 450 14 463 15 PB.5156.1 chr7 - 1621 2 full-splice_match BAG5 rna27956 1785 2 154 10 multi-exon FALSE canonical 36 310 58 NA 6 0 0 FALSE 0 0 NA A coding 447 1341 87 1427 20 PB.181.2 chr1 - 2908 1 incomplete-splice_match RUNX3 rna920 4202 5 1240 55 mono-exon FALSE canonical NA NA NA NA 13 2 NA FALSE 0 0 NA B coding 119 357 49 405 40 PB.8469.1 chr14 - 2514 1 novel_in_catalog STX3 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 6 6 NA FALSE 0 0 NA C non_coding NA NA NA NA 15 PB.8469.2 chr14 - 2999 11 full-splice_match STX3 rna45719 7115 11 930 3186 multi-exon FALSE canonical 0 0 1073 539.420058952 2 2 0 FALSE 0 0 NA C coding 290 870 185 1054 15 PB.8469.3 chr14 - 2933 11 novel_not_in_catalog STX3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1009 539.420058952 6 2 0 FALSE 0 0 NA C coding 292 876 143 1018 15 PB.8469.4 chr14 - 2945 11 full-splice_match STX3 rna45720 6514 11 382 3187 multi-exon FALSE canonical 5 9 1097 537.613243884 2 4 0 FALSE 0 0 NA C coding 290 870 209 1078 15 PB.181.7 chr1 - 3705 5 novel_not_in_catalog RUNX3 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 240 17.1464281995 11 2 0 FALSE 0 0 NA B coding 306 918 286 1203 40 PB.181.5 chr1 - 3566 5 novel_not_in_catalog RUNX3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 97 17.1464281995 4 2 0 FALSE 0 0 NA B coding 306 918 143 1060 35 PB.7174.2 chr11 - 2651 17 full-splice_match CDK17 rna38925 3905 17 26 1228 multi-exon FALSE canonical 44 253 579 313.281024002 5 2 0 FALSE 0 0 NA C coding 523 1569 609 2177 30 PB.7174.1 chr11 - 4374 16 full-splice_match CDK17 rna38926 2567 16 -12 -1795 multi-exon FALSE canonical 44 253 556 309.030742807 3 6 0 FALSE 0 0 NA C coding 523 1569 586 2154 25 PB.3205.1 chr4 - 3157 1 novel_in_catalog ENPP1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.10988.1 chr19 + 3347 31 novel_in_catalog ARHGEF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 22 59 1367 185.045940242 178 1 0 FALSE 0 0 NA C coding 972 2916 67 2982 25 PB.10988.2 chr19 + 3174 29 full-splice_match ARHGEF1 rna59365 3248 29 70 4 multi-exon FALSE canonical 18 53 1194 176.008522521 57 0 0 FALSE 0 0 NA C coding 912 2736 74 2809 25 PB.10988.5 chr19 + 3400 31 full-splice_match ARHGEF1 rna59359 3451 31 40 11 multi-exon FALSE canonical 7 8 2708 195.307449935 32 0 0 FALSE 0 0 NA C coding 979 2937 104 3040 30 PB.10988.6 chr19 + 3712 30 novel_in_catalog ARHGEF1 novel NA NA NA NA combination_of_known_junctions TRUE canonical 22 63 1242 179.329306027 2 2 0 FALSE 0 0 NA C coding 571 1713 1638 3350 30 PB.4355.3 chr6 - 1583 13 full-splice_match PDLIM7 rna23470 1610 13 20 7 multi-exon FALSE canonical 6 15 617 173.461811359 33 2 0 FALSE 0 0 NA C coding 423 1269 86 1354 5 PB.291.83 chr1 - 1446 4 novel_not_in_catalog CSF3R novel NA NA NA NA any annotated donor/acceptor FALSE canonical 21 69 169 829.725255732 2 3 0 FALSE 0 0 NA B non_coding NA NA NA NA 80 PB.10323.2 chr17 + 1315 11 incomplete-splice_match DNAJC3 rna55716 2287 12 64 908 3prime_fragment FALSE canonical 44 705 120 377.564564015 6 0 0 FALSE 0 0 NA C coding 425 1275 39 1313 60 PB.10323.1 chr17 + 5475 12 full-splice_match DNAJC3 rna55716 2287 12 8 -3196 multi-exon FALSE canonical 44 705 176 359.995833309 53 4 0 FALSE 0 0 NA C coding 504 1512 95 1606 15 PB.7695.1 chr12 - 2319 12 full-splice_match TMBIM1 rna41580 2308 12 9 -20 multi-exon FALSE canonical 31 335 68 911.879377988 15 0 0 FALSE 0 0 NA C coding 311 933 113 1045 35 PB.7695.6 chr12 - 2465 13 novel_not_in_catalog TMBIM1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 2 38 1156.07395957 2 2 0 FALSE 0 0 NA C coding 311 933 259 1191 35 PB.291.86 chr1 - 2027 5 novel_not_in_catalog CSF3R novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1394 706.696540249 2 3 0 TRUE 0 0 NA B non_coding NA NA NA NA 75 PB.291.85 chr1 - 3577 3 novel_not_in_catalog CSF3R novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 3090 935.499866382 12 0 0 TRUE 0 0 NA B non_coding NA NA NA NA 65 PB.291.84 chr1 - 1334 5 novel_not_in_catalog CSF3R novel NA NA NA NA any annotated donor/acceptor FALSE canonical 23 156 347 724.638530579 2 1 0 FALSE 0 0 NA B non_coding NA NA NA NA 80 PB.6552.1 chr10 + 2868 4 full-splice_match ISX rna35777 869 4 -374 -1625 multi-exon FALSE canonical 0 0 661 0 18 4 0 FALSE 0 0 NA C coding 245 735 433 1167 30 PB.1052.1 chr1 + 2603 8 full-splice_match STX6 rna5792 2374 8 -97 -132 multi-exon FALSE canonical 40 234 934 114.140264587 3 2 0 FALSE 0 0 NA A coding 255 765 244 1008 45 PB.11074.4 chr19 + 2975 6 full-splice_match SPHK2 rna59833 2960 6 -17 2 multi-exon FALSE canonical 2 2 432 48.4355241532 2 1 0 FALSE 0 0 NA C coding 618 1854 502 2355 10 PB.11074.3 chr19 + 2611 6 full-splice_match SPHK2 rna59832 2617 6 4 2 multi-exon FALSE canonical 0 0 68 48.774993593 2 0 0 FALSE 0 0 NA C coding 618 1854 138 1991 10 PB.8847.1 chr14 - 2308 1 genic_intron novelGene_1929 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 60 PB.11074.1 chr19 + 2953 7 novel_not_in_catalog SPHK2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 413 44.5308881564 23 1 0 FALSE 0 0 NA C coding 651 1953 382 2334 10 PB.10716.2 chr19 + 3772 26 incomplete-splice_match SMARCA4 rna57843 5676 33 1905 -1 internal_fragment FALSE canonical 36 268 2015 242.251934977 7 2 0 FALSE 0 0 NA A coding 1088 3264 48 3311 15 PB.9748.1 chr16 + 2724 10 full-splice_match PPP1R9B rna52884 4559 10 1832 3 multi-exon FALSE canonical 41 736 1063 348.532638357 7 0 0 FALSE 0 0 NA C coding 341 1023 92 1114 10 PB.9228.12 chr15 + 3134 1 genic_intron novelGene_925 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 8 NA FALSE 0 0 NA B coding 270 810 525 1334 70 PB.9748.6 chr16 + 1613 1 incomplete-splice_match PPP1R9B rna52884 4559 10 2940 7 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 15 PB.10716.5 chr19 + 3525 18 full-splice_match LDLR rna57846 4966 18 1073 368 multi-exon FALSE canonical 13 61 2218 85.5102333057 2 2 0 FALSE 0 0 NA A coding 860 2580 79 2658 5 PB.5536.1 chr8 - 1554 9 full-splice_match FBXO32 rna29955 1379 9 -184 9 multi-exon FALSE canonical 28 412 362 218.778426724 8 1 0 FALSE 0 0 NA A coding 355 1065 247 1311 40 PB.5010.1 chr7 - 1330 8 full-splice_match MED6 rna27030 1642 8 55 257 multi-exon FALSE canonical 39 290 38 241.73332414 3 1 0 FALSE 0 0 NA A coding 246 738 17 754 30 PB.707.1 chr1 + 3148 10 novel_not_in_catalog PRUNE novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 289 184.553515274 3 0 0 TRUE 0 0 NA C coding 271 813 561 1373 5 PB.1131.1 chr1 + 1679 1 genic_intron novelGene_2636 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.11157.1 chr19 + 4891 4 novel_not_in_catalog LOC720207 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 36 147 45 106.57391801 2 3 0 FALSE 0 0 NA A coding 986 2958 119 3076 15 PB.1011.43 chr1 - 2827 20 novel_in_catalog PTPRC novel NA NA NA NA combination_of_known_junctions FALSE canonical 33 1284 172 1316.23136264 2 0 0 FALSE 0 0 NA C coding 500 1500 73 1572 20 PB.8863.7 chr14 + 1598 1 incomplete-splice_match ARCN1 rna48153 3920 10 2313 10 mono-exon FALSE canonical NA NA NA NA 9 0 NA FALSE 0 0 NA B non_coding NA NA NA NA 40 PB.4806.44 chr7 + 1629 5 novel_not_in_catalog LOC711031 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 11 84 128 304.264687402 4 1 0 FALSE 0 0 NA B coding 173 519 65 583 5 PB.1011.40 chr1 - 2138 21 incomplete-splice_match PTPRC rna5563 4840 31 71 2631 internal_fragment FALSE canonical 33 1284 186 1305.1540139 6 1 0 FALSE 0 0 NA C coding 684 2052 87 2138 50 PB.4806.42 chr7 + 1807 5 novel_in_catalog LOC711031 novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 289 304 228.203856234 7 1 0 FALSE 0 0 NA B coding 140 420 340 759 5 PB.1281.5 chr2 - 2100 2 incomplete-splice_match CCDC80 rna6973 3939 9 470 1369 internal_fragment FALSE canonical 33 731 453 NA 2 0 0 FALSE 0 0 NA C coding 444 1332 768 2099 60 PB.4806.40 chr7 + 1390 8 fusion LOC106999350_LOC710951 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 22 557.057447666 3 5 0 TRUE 0 0 NA B coding 120 360 77 436 30 PB.4806.41 chr7 + 1380 7 fusion LOC106999350_LOC710951 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 386 560.195501589 2 2 0 TRUE 0 0 NA B coding 127 381 42 422 20 PB.1790.1 chr2 + 1396 3 full-splice_match SUCNR1 rna9520 4242 3 35 2811 multi-exon FALSE canonical 25 183 64 47.4973683482 2 0 0 FALSE 0 0 NA A coding 325 975 106 1080 70 PB.1734.1 chr2 + 5621 27 full-splice_match PLD1 rna9260 6031 27 48 362 multi-exon FALSE canonical 25 54 96 210.176116626 2 12 0 FALSE 0 0 NA C coding 1074 3222 128 3349 40 PB.9837.2 chr16 - 3373 6 novel_in_catalog KRT20 novel NA NA NA NA combination_of_known_junctions FALSE canonical 1 1 847 1 5 2 0 FALSE 0 0 NA C coding 380 1140 56 1195 10 PB.9837.1 chr16 - 1512 8 full-splice_match KRT20 rna53309 1902 8 149 241 multi-exon FALSE canonical 1 1 852 1 539 0 0 FALSE 0 0 NA C coding 424 1272 61 1332 30 PB.2056.5 chr3 - 2932 8 novel_in_catalog MORC3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 781 53 1396.31013747 2 6 0 FALSE 0 0 NA C coding 363 1089 15 1103 80 PB.3682.1 chr5 - 2740 7 full-splice_match ELF2 rna20074 3003 7 243 20 multi-exon FALSE canonical 47 460 104 758.109490773 6 0 0 FALSE 0 0 NA C coding 533 1599 47 1645 60 PB.8560.1 chr14 - 2904 1 antisense novelGene_FBXO3_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 17 NA FALSE 0 0 NA A non_coding NA NA NA NA 55 PB.2056.2 chr3 - 4092 17 full-splice_match MORC3 rna10999 4366 17 158 116 multi-exon FALSE canonical 47 781 80 981.116201069 41 0 0 FALSE 0 0 NA C coding 939 2817 42 2858 45 PB.8669.2 chr14 - 2876 19 full-splice_match RRM1 rna47111 3161 19 -18 303 multi-exon FALSE canonical 46 782 326 231.257432313 127 0 0 FALSE 0 0 NA A coding 792 2376 308 2683 40 PB.2571.2 chr3 + 5370 3 full-splice_match TMEM140 rna13841 1733 3 -14 -3623 multi-exon FALSE canonical 37 287 290 17 23 6 0 FALSE 0 0 NA C coding 225 675 195 869 35 PB.417.1 chr1 - 1115 8 full-splice_match TMEM59 rna2228 1696 8 233 348 multi-exon FALSE canonical 48 8090 638 1789.06819322 138 0 0 FALSE 0 0 NA A coding 323 969 14 982 25 PB.2912.10 chr4 + 2523 1 genic_intron novelGene_845 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.11843.1 chrX + 1698 3 full-splice_match GPR34 rna63695 1895 3 32 165 multi-exon FALSE canonical 29 359 150 9 3 0 0 FALSE 0 0 NA A coding 374 1122 251 1372 35 PB.2312.3 chr3 - 2772 5 full-splice_match KLHL7 rna12410 1020 5 60 -1812 multi-exon FALSE canonical 19 50 673 275.811529853 2 12 0 FALSE 0 0 NA C coding 166 498 232 729 95 PB.2312.2 chr3 - 2891 10 novel_in_catalog KLHL7 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 7 7 1188 229.176787655 2 1 0 FALSE 0 0 NA C coding 336 1008 253 1260 40 PB.2312.1 chr3 - 3024 11 full-splice_match KLHL7 rna12409 3082 11 -33 91 multi-exon FALSE canonical 38 342 706 151.383618665 30 1 0 FALSE 0 0 NA C coding 586 1758 265 2022 40 PB.8161.1 chr13 + 2854 3 full-splice_match ITPRIPL1 rna44154 4167 3 44 1269 multi-exon FALSE canonical 22 42 203 13 23 2 0 FALSE 0 0 NA A coding 555 1665 301 1965 20 PB.6441.1 chr10 + 2926 5 full-splice_match PEX26 rna35097 1773 5 259 -1412 multi-exon FALSE canonical 32 115 345 123.324774478 31 5 0 FALSE 0 0 NA A coding 305 915 116 1030 85 PB.7551.4 chr12 + 5659 25 full-splice_match ITGA6 rna40751 4613 25 -6 -1040 multi-exon FALSE canonical 40 243 381 378.581563207 2 18 0 FALSE 0 0 NA C coding 1091 3273 200 3472 25 PB.6652.2 chr10 - 1503 9 full-splice_match POLDIP3 rna36193 1266 9 -86 -151 multi-exon FALSE canonical 44 519 145 181.267757751 130 0 0 FALSE 0 0 NA C coding 421 1263 87 1349 5 PB.788.3 chr1 - 2599 4 full-splice_match ISG20L2 rna4347 2736 4 -240 377 multi-exon FALSE canonical 25 48 327 133.566462857 27 0 0 FALSE 0 0 NA C coding 354 1062 484 1545 50 PB.6652.1 chr10 - 2127 1 genic POLDIP3 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 10 PB.4954.1 chr7 + 1610 7 full-splice_match JKAMP rna26729 2178 7 25 543 multi-exon FALSE canonical 45 591 50 310.937292713 16 1 0 FALSE 0 0 NA C coding 311 933 47 979 40 PB.10083.12 chr16 + 6902 14 novel_in_catalog RNF213 novel NA NA NA NA combination_of_known_junctions FALSE canonical 37 449 5447 229.261859017 2 5 0 FALSE 0 0 NA B coding 208 624 5439 6062 5 PB.10763.54 chr19 + 1350 7 incomplete-splice_match ADGRE5 rna58123 3244 18 1884 10 internal_fragment FALSE canonical 29 68 75 232.750939848 6 0 0 FALSE 0 0 NA C coding 206 618 142 759 30 PB.11541.2 chr20 + 1398 1 incomplete-splice_match CCL22 rna62313 2928 3 1529 2 mono-exon FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 0 PB.10083.16 chr16 + 2724 13 incomplete-splice_match RNF213 rna54510 14995 57 11326 945 internal_fragment FALSE canonical 37 449 1268 235.187159513 5 1 0 FALSE 0 0 NA B coding 576 1728 156 1883 10 PB.11541.1 chr20 + 2914 3 full-splice_match CCL22 rna62313 2928 3 6 8 multi-exon FALSE canonical 4 6 106 0 9 2 0 FALSE 0 0 NA C coding 93 279 34 312 25 PB.9180.1 chr15 + 4144 17 full-splice_match TMEM245 rna49820 4179 17 26 9 multi-exon FALSE canonical 38 195 586 381.129899116 13 9 0 FALSE 0 0 NA C coding 871 2613 8 2620 75 PB.8583.1 chr14 - 1455 6 full-splice_match HTATIP2 rna46507 1478 6 13 10 multi-exon FALSE canonical 23 66 161 419.768984085 23 0 0 FALSE 0 0 NA C coding 275 825 64 888 15 PB.9180.3 chr15 + 2615 1 novel_in_catalog TMEM245 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 5 1 NA FALSE 0 0 NA C coding 255 765 12 776 85 PB.9180.2 chr15 + 3012 18 novel_in_catalog TMEM245 novel NA NA NA NA combination_of_known_junctions FALSE canonical 38 195 587 416.229504 15 1 0 FALSE 0 0 NA C coding 871 2613 9 2621 40 PB.1113.10 chr1 - 3481 1 genic_intron novelGene_2628 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.548.1 chr1 - 2727 1 genic_intron novelGene_1788 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA A coding 140 420 436 855 75 PB.5172.193 chr7 + 1483 10 fusion LOC720839_LOC711872_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 143 2568.86764937 2 6 0 TRUE 0 0 NA B coding 454 1362 78 1439 20 PB.4837.1 chr7 + 2095 10 full-splice_match NOP9 rna26198 1999 10 9 -105 multi-exon FALSE canonical 44 193 1348 120.411793442 4 0 0 FALSE 0 0 NA A coding 637 1911 62 1972 20 PB.4573.1 chr7 + 2496 8 full-splice_match RAB8B rna24738 4035 8 95 1444 multi-exon FALSE canonical 47 1061 115 144.899965493 21 3 0 FALSE 0 0 NA C coding 126 378 235 612 60 PB.8142.2 chr13 + 2878 1 genic_intron novelGene_1677 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 13 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.4573.3 chr7 + 1961 1 genic RAB8B novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 50 PB.7551.3 chr12 + 5616 26 full-splice_match ITGA6 rna40750 5951 26 329 6 multi-exon FALSE canonical 40 243 382 389.57797679 3 1 0 FALSE 0 0 NA C coding 1073 3219 201 3419 40 PB.61.2 chr1 + 1476 1 incomplete-splice_match H6PD rna338 9203 5 7722 6 mono-exon FALSE canonical NA NA NA NA 147 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 35 PB.1518.2 chr2 + 2945 1 full-splice_match TLR9 rna8179 3097 1 287 -135 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA C coding 927 2781 27 2807 25 PB.5186.1 chr8 + 1968 10 full-splice_match CTSB rna28225 3136 10 3 1165 multi-exon FALSE canonical 41 1004 61 3406.1083365 108 0 0 FALSE 0 0 NA C coding 339 1017 87 1103 25 PB.61.1 chr1 + 5759 5 full-splice_match H6PD rna338 9203 5 114 3330 multi-exon FALSE canonical 30 179 166 305.06720571 7 3 0 FALSE 0 0 NA C coding 791 2373 177 2549 20 PB.1119.3 chr1 + 1598 4 novel_in_catalog GPA33 novel NA NA NA NA combination_of_known_junctions FALSE canonical 2 2 520 2.82842712475 2 1 0 FALSE 0 0 NA C coding 257 771 58 828 85 PB.1119.2 chr1 + 3191 6 novel_not_in_catalog GPA33 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 549 4.24264068712 2 54 0 TRUE 0 0 NA C coding 230 690 86 775 20 PB.1119.1 chr1 + 2510 7 full-splice_match GPA33 rna6164 2792 7 271 11 multi-exon FALSE canonical 2 2 479 3.46410161514 66 1 0 FALSE 0 0 NA C coding 334 1002 17 1018 20 PB.961.4 chr1 + 1480 1 incomplete-splice_match RBBP5 rna5251 4282 14 2688 115 mono-exon FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA C coding 114 342 962 1303 85 PB.3480.1 chr5 + 2967 1 intergenic novelGene_1062 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 8 2 NA FALSE 0 0 NA A coding 109 327 1876 2202 80 PB.6572.1 chr10 + 1674 8 full-splice_match KCTD17 rna35895 1684 8 6 4 multi-exon FALSE canonical 28 60 731 142.323574997 4 2 0 FALSE 0 0 NA C coding 288 864 26 889 10 PB.4026.1 chr6 - 4162 8 full-splice_match ARRDC3 rna21868 1859 8 -13 -2290 multi-exon FALSE canonical 48 2286 1098 444.395094482 2 4 0 FALSE 0 0 NA A coding 414 1242 229 1470 30 PB.12033.1 chrX - 1779 1 incomplete-splice_match AMOT rna64833 6728 12 4940 10 mono-exon FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 30 PB.4727.3 chr7 - 1524 1 genic_intron novelGene_1353 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.6769.2 chr11 - 3082 10 full-splice_match SLC2A3 rna36836 2304 10 83 -861 multi-exon FALSE canonical 45 655 1223 338.304596481 155 1 0 FALSE 0 0 NA A coding 496 1488 156 1643 35 PB.6449.2 chr10 - 6129 1 novel_in_catalog HIRA novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 18 NA FALSE 0 0 NA A coding 119 357 4121 4477 80 PB.4550.1 chr7 - 2997 1 antisense novelGene_AQP9_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 20 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.4084.1 chr6 - 1661 1 intergenic novelGene_1933 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 9 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.5171.6 chr7 + 2736 6 novel_not_in_catalog C7H14orf80 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 3 3 648 97.3652915571 2 1 0 FALSE 0 0 NA C coding 228 684 292 975 25 PB.7978.1 chr13 - 6707 1 genic_intron novelGene_977 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 19 NA FALSE 0 0 NA A coding 114 342 1655 1996 90 PB.9196.1 chr15 + 4103 2 full-splice_match TMEM246 rna49912 2090 2 143 -2156 multi-exon FALSE canonical 26 154 102 NA 17 1 0 FALSE 0 0 NA C coding 403 1209 180 1388 25 PB.9196.2 chr15 + 4090 2 full-splice_match TMEM246 rna49914 4488 2 380 18 multi-exon FALSE canonical 7 13 101 NA 2 3 0 FALSE 0 0 NA C coding 403 1209 179 1387 35 PB.8208.1 chr13 + 2734 1 novel_in_catalog IL1R2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1004.1 chr1 + 1480 6 full-splice_match TMEM9 rna5509 1568 6 84 4 multi-exon FALSE canonical 34 181 21 238.006302438 40 0 0 FALSE 0 0 NA A coding 183 549 58 606 20 PB.516.5 chr1 + 2604 1 genic_intron novelGene_1701 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 9 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.516.2 chr1 + 3660 2 novel_in_catalog LRRC8C novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 105 191 NA 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.516.3 chr1 + 2981 2 genic_intron novelGene_1700 novel NA NA NA NA no_subcategory FALSE canonical 0 0 32 NA 2 3 0 FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.3122.1 chr4 + 2759 19 novel_in_catalog SYNE1 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical 41 571 786 462.775323456 4 0 0 FALSE 0 0 NA B coding 760 2280 478 2757 65 PB.516.1 chr1 + 2763 3 full-splice_match LRRC8C rna2872 7143 3 -17 4397 multi-exon FALSE canonical 32 105 174 82 9 5 0 FALSE 0 0 NA C coding 803 2409 179 2587 45 PB.8917.1 chr14 + 2767 18 full-splice_match STT3A rna48434 2755 18 22 -34 multi-exon FALSE canonical 46 670 54 467.344626587 55 1 0 FALSE 0 0 NA A coding 705 2115 90 2204 10 PB.2469.1 chr3 - 2145 5 full-splice_match SYPL1 rna13339 2415 5 249 21 multi-exon FALSE canonical 44 1072 544 357.17922672 19 0 0 FALSE 0 0 NA A coding 241 723 143 865 55 PB.5073.1 chr7 + 1765 11 novel_not_in_catalog PSMC1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 492 1058.72187094 2 6 0 TRUE 0 0 NA A coding 227 681 622 1302 20 PB.2385.11 chr3 - 5716 5 novel_not_in_catalog SAMD9L novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 386 357.860307942 2 3 0 FALSE 0 0 NA C coding 1585 4755 661 5415 25 PB.482.1 chr1 + 2983 11 novel_in_catalog NEXN novel NA NA NA NA combination_of_known_junctions FALSE canonical 22 68 180 295.066094291 2 4 0 FALSE 0 0 NA A coding 597 1791 154 1944 25 PB.10985.1 chr19 + 1123 7 full-splice_match CEACAM3 rna59345 1176 7 50 3 multi-exon FALSE canonical 8 31 467 18.6815416923 3 2 0 FALSE 0 0 NA A coding 258 774 44 817 5 PB.9434.2 chr16 - 1658 1 intergenic novelGene_50 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 10 PB.2385.10 chr3 - 5730 5 novel_not_in_catalog SAMD9L novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 426 357.860307942 4 3 0 FALSE 0 0 NA C coding 1585 4755 672 5426 35 PB.7415.1 chr12 - 1430 2 full-splice_match TMEM37 rna40133 1742 2 34 278 multi-exon FALSE canonical 11 40 68 NA 13 2 0 FALSE 0 0 NA A coding 197 591 48 638 15 PB.5450.5 chr8 - 5594 4 full-splice_match TP53INP1 rna29586 2216 4 11 -3389 multi-exon FALSE canonical 30 151 211 452.360475727 2 4 0 FALSE 0 0 NA C coding 241 723 361 1083 15 PB.5450.4 chr8 - 5759 5 full-splice_match TP53INP1 rna29582 6679 5 915 5 multi-exon FALSE canonical 13 24 212 424.057779082 6 5 0 FALSE 0 0 NA C coding 241 723 527 1249 15 PB.5450.3 chr8 - 5631 5 full-splice_match TP53INP1 rna29581 6552 5 916 5 multi-exon FALSE canonical 30 151 211 353.797964946 13 5 0 FALSE 0 0 NA C coding 165 495 361 855 15 PB.5450.2 chr8 - 3404 1 incomplete-splice_match TP53INP1 rna29585 5673 5 2264 6 mono-exon FALSE canonical NA NA NA NA 17 5 NA FALSE 0 0 NA C non_coding NA NA NA NA 15 PB.5450.1 chr8 - 5799 6 full-splice_match TP53INP1 rna29583 6717 6 915 3 multi-exon FALSE canonical 13 24 212 364.66422912 7 13 0 FALSE 0 0 NA C coding 165 495 527 1021 20 PB.2494.1 chr3 - 4023 6 full-splice_match TMEM168 rna13463 4545 6 510 12 multi-exon FALSE canonical 38 233 1612 215.318368933 21 2 0 FALSE 0 0 NA A coding 681 2043 533 2575 40 PB.83.2 chr1 + 4064 19 full-splice_match MFN2 rna442 4645 19 256 325 multi-exon FALSE canonical 41 943 2052 633.702611641 37 1 0 FALSE 0 0 NA C coding 757 2271 181 2451 80 PB.83.1 chr1 + 4429 20 full-splice_match MFN2 rna447 4465 20 144 -108 multi-exon FALSE canonical 35 192 36 801.068661227 7 2 0 FALSE 0 0 NA C coding 757 2271 230 2500 25 PB.7023.3 chr11 - 2998 24 novel_not_in_catalog STAT2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 44 614 1814 471.355492171 2 10 3 FALSE 0 0 NA B coding 602 1806 91 1896 20 PB.11.1 chr1 - 2132 10 novel_not_in_catalog MXRA8 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 502 85.912746435 3 2 0 FALSE 0 0 NA A coding 251 753 598 1350 20 PB.7023.1 chr11 - 3229 25 novel_not_in_catalog STAT2 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 2740 563.227307577 2 5 0 TRUE 0 0 NA B coding 851 2553 53 2605 30 PB.2228.5 chr3 - 1158 1 incomplete-splice_match OGDH rna11984 3988 24 2824 7 mono-exon FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA C non_coding NA NA NA NA 5 PB.3219.2 chr4 - 2809 6 full-splice_match NCOA7 rna17488 6035 6 3002 224 multi-exon FALSE canonical 38 260 117 353.933609594 53 2 0 FALSE 0 0 NA C coding 219 657 43 699 70 PB.3219.1 chr4 - 5325 16 novel_not_in_catalog NCOA7 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 195 411.711063733 2 4 0 FALSE 0 0 NA C coding 909 2727 264 2990 25 PB.8958.1 chr15 - 1619 14 full-splice_match NOXA1 rna48687 1627 14 3 5 multi-exon FALSE canonical 7 14 1213 16.7032930885 11 0 0 FALSE 0 0 NA A coding 476 1428 150 1577 25 PB.3504.1 chr5 + 3011 1 novel_in_catalog NUP54 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 17 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.642.1 chr1 + 3382 22 novel_in_catalog ATP1A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 45 3621 3032 1370.98760024 342 0 0 FALSE 0 0 NA B coding 992 2976 83 3058 25 PB.1693.2 chr2 - 2977 21 novel_not_in_catalog PSMD2 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 10 23 1021 747.265682338 2 10 0 FALSE 0 0 NA B coding 569 1707 1112 2818 5 PB.8649.1 chr14 + 1746 8 full-splice_match ARFIP2 rna46978 1811 8 64 1 multi-exon FALSE canonical 29 85 85 288.797506914 10 1 0 FALSE 0 0 NA C coding 341 1023 128 1150 25 PB.8649.2 chr14 + 1720 8 novel_not_in_catalog ARFIP2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 95 312.75069944 2 2 0 TRUE 0 0 NA C coding 341 1023 108 1130 35 PB.8649.3 chr14 + 3381 2 novel_in_catalog ARFIP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 1063 1221 NA 2 2 0 FALSE 0 0 NA C non_coding NA NA NA NA 95 PB.10521.1 chr18 - 1433 1 intergenic novelGene_1335 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.4192.1 chr6 + 4542 26 incomplete-splice_match LOC698045 rna22708 8080 34 4 3534 3prime_fragment FALSE canonical 46 507 2059 470.616616791 2 0 0 FALSE 0 0 NA B coding 1466 4398 145 4542 80 PB.3239.2 chr4 + 2863 8 novel_in_catalog FRK novel NA NA NA NA combination_of_known_junctions FALSE canonical 15 203 1619 35.5246393367 2 4 0 FALSE 0 0 NA C coding 505 1515 480 1994 30 PB.1898.4 chr2 - 3263 1 novel_in_catalog RAB5A novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 10 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.4002.5 chr6 - 2078 1 novel_in_catalog SERINC5 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C coding 110 330 127 456 45 PB.473.1 chr1 + 2947 4 full-splice_match FPGT rna2579 4517 4 56 1514 multi-exon FALSE canonical 37 340 354 42.4735211632 24 1 0 FALSE 0 0 NA A coding 594 1782 12 1793 20 PB.3931.3 chr6 + 3482 12 novel_in_catalog GPBP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 154 229 852.233536069 14 10 0 FALSE 0 0 NA C coding 473 1419 1241 2659 20 PB.6982.24 chr11 + 1491 15 novel_not_in_catalog PCBP2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 929 1487.01143237 5 7 0 TRUE 0 0 NA C coding 323 969 350 1318 10 PB.3931.1 chr6 + 2853 12 novel_in_catalog GPBP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 36 165 92 849.570479713 3 3 0 FALSE 0 0 NA C coding 473 1419 1104 2522 30 PB.6982.26 chr11 + 1642 10 novel_not_in_catalog PCBP2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 919 1217.16432744 2 12 0 TRUE 0 0 NA C coding 202 606 340 945 70 PB.6982.21 chr11 + 1501 15 novel_not_in_catalog PCBP2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 853 1563.76181051 2 4 0 TRUE 0 0 NA C coding 326 978 350 1327 10 PB.6982.20 chr11 + 1539 13 novel_not_in_catalog PCBP2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 929 1255.62215654 3 9 0 TRUE 0 0 NA C coding 202 606 350 955 15 PB.6982.23 chr11 + 1537 16 novel_not_in_catalog PCBP2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 853 1546.04754131 2 4 0 TRUE 0 0 NA C coding 215 645 350 994 5 PB.10601.1 chr19 - 2399 3 full-splice_match TBXA2R rna57304 2840 3 184 257 multi-exon FALSE canonical 2 2 1232 0 3 1 0 FALSE 0 0 NA A coding 343 1029 447 1475 10 PB.6982.28 chr11 + 2796 12 novel_not_in_catalog PCBP2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 708 1304.41442801 2 7 0 TRUE 0 0 NA C coding 202 606 129 734 10 PB.881.8 chr1 + 1652 1 incomplete-splice_match LBR rna4786 3788 14 2134 3 mono-exon FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 15 PB.2392.1 chr3 - 1594 9 full-splice_match PON2 rna12926 1904 9 306 4 multi-exon FALSE canonical 33 569 140 508.157455913 42 0 0 FALSE 0 0 NA A coding 375 1125 4 1128 10 PB.5701.1 chr9 + 1467 1 genic_intron novelGene_430 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 100 PB.2795.10 chr4 + 2749 1 full-splice_match LOC106997824 rna14973 2271 1 -483 5 mono-exon FALSE canonical NA NA NA NA 6 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 10 PB.1660.1 chr2 - 3227 3 novel_in_catalog MYD88 novel NA NA NA NA combination_of_known_junctions FALSE canonical 33 128 368 164 4 1 0 FALSE 0 0 NA B coding 185 555 2 556 20 PB.10633.5 chr19 - 2526 10 novel_in_catalog SAFB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 440 2112 356.379011728 3 4 0 FALSE 0 0 NA C coding 222 666 62 727 40 PB.10633.4 chr19 - 1676 12 incomplete-splice_match SAFB2 rna57436 3392 21 223 1493 internal_fragment FALSE canonical 47 440 1209 365.009588915 2 0 0 FALSE 0 0 NA C coding 537 1611 65 1675 65 PB.10633.7 chr19 - 1587 11 incomplete-splice_match SAFB2 rna57436 3392 21 199 1606 internal_fragment FALSE canonical 47 440 1233 361.274134142 3 0 0 FALSE 0 0 NA C coding 499 1497 89 1585 55 PB.10633.6 chr19 - 2955 9 novel_in_catalog SAFB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 608 2591 301.081384346 4 1 0 FALSE 0 0 NA C coding 222 666 62 727 40 PB.10633.1 chr19 - 3099 21 full-splice_match SAFB2 rna57436 3392 21 226 67 multi-exon FALSE canonical 9 11 2699 520.643832192 18 2 0 FALSE 0 0 NA C coding 953 2859 62 2920 25 PB.10633.2 chr19 - 2655 20 novel_in_catalog SAFB2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 9 11 2192 550.768553932 2 4 0 FALSE 0 0 NA C coding 499 1497 917 2413 5 PB.5404.1 chr8 + 3881 6 full-splice_match PI15 rna29347 6786 6 -5 2910 multi-exon FALSE canonical 4 10 142 68.8621812027 2 4 0 FALSE 0 0 NA A coding 258 774 183 956 90 PB.11984.3 chrX - 3364 1 genic_intron novelGene_1562 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.8641.1 chr14 - 3958 7 full-splice_match ZNF215 rna46936 4116 7 154 4 multi-exon FALSE canonical 33 143 335 41.0974451761 2 2 0 FALSE 0 0 NA A coding 517 1551 515 2065 25 PB.11236.1 chr20 - 1483 2 novel_in_catalog C20H16orf13 novel NA NA NA NA combination_of_known_junctions FALSE canonical 10 14 240 NA 2 4 0 FALSE 0 0 NA A coding 197 591 44 634 5 PB.9808.1 chr16 - 3572 1 genic_intron novelGene_951 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA A coding 107 321 473 793 85 PB.7033.1 chr11 - 3504 22 incomplete-splice_match STAT6 rna38289 6420 28 15 2901 internal_fragment FALSE canonical 35 296 764 224.445984593 183 0 0 FALSE 0 0 NA C coding 847 2541 234 2774 30 PB.5198.2 chr8 + 3104 1 genic_intron novelGene_242 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 16 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.6169.1 chr10 - 2639 3 full-splice_match FAM210B rna33720 3023 3 58 326 multi-exon FALSE canonical 35 304 196 578.499783924 14 3 0 FALSE 0 0 NA A coding 192 576 11 586 70 PB.5198.1 chr8 + 1234 3 full-splice_match MFHAS1 rna28287 6349 3 3076 2039 multi-exon FALSE canonical 45 485 455 20.4939015319 6 3 0 FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.9493.1 chr16 + 3805 21 incomplete-splice_match KIF1C rna51552 4030 23 222 3 internal_fragment TRUE canonical 31 923 318 1056.37919328 2 1 0 FALSE 0 0 NA A coding 1074 3222 43 3264 5 PB.10763.49 chr19 + 1979 1 genic_intron novelGene_330 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA A coding 106 318 784 1101 75 PB.5416.10 chr8 - 3590 1 novel_in_catalog PAG1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 11 11 NA FALSE 0 0 NA C non_coding NA NA NA NA 60 PB.10153.1 chr17 + 2656 3 intergenic novelGene_153 novel NA NA NA NA no_subcategory FALSE canonical 5 5 446 0 2 2 0 FALSE 0 0 NA A non_coding NA NA NA NA 30 PB.2610.4 chr3 + 1190 8 fusion LOC703029_LOC701262 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 397 1084.74835792 2 2 0 TRUE 0 0 NA A coding 129 387 53 439 15 PB.2610.6 chr3 + 2630 1 genic_intron novelGene_2531 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 80 PB.9746.1 chr16 - 3058 5 full-splice_match TMEM92 rna52878 612 5 114 -2560 multi-exon FALSE canonical 0 0 87 1 3 1 0 FALSE 0 0 NA A coding 159 477 19 495 30 PB.2610.1 chr3 + 1162 7 fusion LOC696806_LOC703029 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 385 1082.67585177 3 6 0 TRUE 0 0 NA A coding 123 369 52 420 15 PB.2610.3 chr3 + 1153 8 fusion LOC703029_LOC698913 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 338 1110.37876421 4 2 0 TRUE 0 0 NA A coding 121 363 48 410 15 PB.8962.1 chr15 + 2591 13 full-splice_match ANAPC2 rna48726 2633 13 46 -4 multi-exon FALSE canonical 26 41 845 58.2837884836 53 1 0 FALSE 0 0 NA A coding 681 2043 396 2438 5 PB.12138.1 chrX + 3061 1 intergenic novelGene_2323 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA A coding 105 315 2591 2905 25 PB.3572.2 chr5 - 2806 11 full-splice_match SPARCL1 rna19373 3240 11 423 11 multi-exon FALSE canonical 32 8493 420 2604.04704259 128 0 0 FALSE 0 0 NA A coding 661 1983 432 2414 45 PB.9669.1 chr16 - 1430 2 full-splice_match EVI2A rna52458 1833 2 289 114 multi-exon FALSE canonical 47 1298 93 NA 20 1 0 FALSE 0 0 NA A coding 236 708 103 810 40 PB.8655.1 chr14 - 1861 2 novel_in_catalog LOC106993347 novel NA NA NA NA combination_of_known_junctions FALSE canonical 9 32 573 NA 3 2 0 FALSE 0 0 NA A coding 36 108 447 554 90 PB.953.1 chr1 - 2659 1 incomplete-splice_match SRGAP2 rna5182 6755 22 4087 10 mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA B coding 101 303 1978 2280 20 PB.5432.1 chr8 - 3723 1 incomplete-splice_match MMP16 rna29462 11785 10 7781 282 mono-exon FALSE canonical NA NA NA NA 2 17 NA FALSE 0 0 NA A non_coding NA NA NA NA 50 PB.12062.2 chrX + 5942 34 full-splice_match STAG2 rna64989 6087 34 139 6 multi-exon FALSE canonical 47 667 3816 829.446200787 2 1 0 FALSE 0 0 NA C coding 1268 3804 239 4042 20 PB.6510.1 chr10 - 1783 5 full-splice_match XBP1 rna35534 1780 5 -10 7 multi-exon FALSE canonical 46 1410 247 900.985016524 82 3 0 FALSE 0 0 NA C coding 261 783 21 803 20 PB.1805.1 chr2 + 2568 18 full-splice_match GFM1 rna9637 2901 18 -32 365 multi-exon FALSE canonical 46 677 137 475.618544634 31 3 0 FALSE 0 0 NA A coding 751 2253 57 2309 40 PB.3963.1 chr6 + 2931 18 novel_in_catalog RAD17 novel NA NA NA NA combination_of_known_junctions FALSE canonical 21 44 132 204.450483003 3 1 0 FALSE 0 0 NA B coding 670 2010 409 2418 10 PB.7614.1 chr12 + 2853 6 full-splice_match NABP1 rna41108 1015 6 -305 -1533 multi-exon FALSE canonical 41 453 560 302.602048903 3 2 0 FALSE 0 0 NA A coding 204 612 470 1081 50 PB.1753.3 chr2 - 1932 2 novel_in_catalog MYNN novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 950 64 NA 5 1 0 FALSE 0 0 NA C coding 89 267 96 362 60 PB.3627.1 chr5 + 1541 1 novel_in_catalog PPA2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 13 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.1753.1 chr2 - 2793 8 full-splice_match MYNN rna9316 4142 8 1340 9 multi-exon FALSE canonical 40 489 356 162.920225878 2 1 0 FALSE 0 0 NA C coding 610 1830 91 1920 45 PB.9335.2 chr15 - 2631 1 novel_in_catalog CD274 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 55 PB.9335.1 chr15 - 3718 7 full-splice_match CD274 rna50748 4170 7 388 64 multi-exon FALSE canonical 20 98 225 38.6522961802 20 0 0 FALSE 0 0 NA C coding 290 870 240 1109 25 PB.11487.1 chr20 + 2700 6 full-splice_match ARMC5 rna62030 4285 6 1580 5 multi-exon FALSE canonical 1 1 1480 25.7293606605 26 0 0 FALSE 0 0 NA A coding 772 2316 106 2421 10 PB.5707.1 chr9 + 916 8 full-splice_match COMMD3 rna30854 721 8 -13 -182 multi-exon FALSE canonical 45 916 165 302.302828303 3 0 0 FALSE 0 0 NA A coding 195 585 27 611 40 PB.6500.2 chr10 - 3837 14 full-splice_match HPS4 rna35497 3949 14 76 36 multi-exon FALSE canonical 43 263 2435 112.169514575 27 0 0 FALSE 0 0 NA C coding 708 2124 590 2713 50 PB.8835.4 chr14 - 2102 6 full-splice_match NXPE4 rna48033 2307 6 199 6 multi-exon FALSE canonical 2 2 118 1.73205080757 6 0 0 FALSE 0 0 NA C coding 544 1632 129 1760 25 PB.3627.3 chr5 + 1189 12 full-splice_match PPA2 rna19612 1219 12 21 9 multi-exon FALSE canonical 46 885 180 405.053082941 3 0 0 FALSE 0 0 NA C coding 334 1002 24 1025 25 PB.20.22 chr1 - 1494 3 novel_in_catalog NADK novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 720 109 335 2 0 0 FALSE 0 0 NA C coding 180 540 557 1096 65 PB.20.20 chr1 - 1853 13 novel_not_in_catalog NADK novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 36 638.690848533 2 6 0 TRUE 0 0 NA C coding 442 1326 129 1454 25 PB.5495.1 chr8 - 2648 1 intergenic novelGene_1899 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.11738.1 chr20 - 6196 7 novel_in_catalog CBFA2T3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 4 6 3397 2.44948974278 3 19 0 FALSE 0 0 NA A coding 305 915 3325 4239 45 PB.109.3 chr1 + 3454 4 full-splice_match SZRD1 rna581 3670 4 212 4 multi-exon FALSE canonical 35 149 116 165.535494683 42 5 0 FALSE 0 0 NA C coding 151 453 16 468 15 PB.12062.4 chrX + 5900 34 full-splice_match STAG2 rna64996 4342 34 48 -1606 multi-exon FALSE canonical 47 667 3772 819.131857517 6 2 0 FALSE 0 0 NA C coding 1268 3804 195 3998 15 PB.109.6 chr1 + 1564 1 incomplete-splice_match SZRD1 rna584 3620 3 2054 3 mono-exon FALSE canonical NA NA NA NA 12 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 15 PB.2618.1 chr3 + 2728 10 full-splice_match PDIA4 rna14068 2951 10 218 5 multi-exon FALSE canonical 42 1015 1187 566.39209034 302 0 0 FALSE 0 0 NA A coding 644 1932 60 1991 40 PB.109.4 chr1 + 3398 3 full-splice_match SZRD1 rna584 3620 3 211 11 multi-exon FALSE canonical 34 161 67 196 57 4 0 FALSE 0 0 NA C coding 132 396 24 419 25 PB.109.5 chr1 + 1701 4 novel_not_in_catalog SZRD1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 61 225.78308174 3 3 0 TRUE 0 0 NA C non_coding NA NA NA NA 25 PB.2765.1 chr4 - 877 1 full-splice_match LOC100427953 rna14845 910 1 14 19 mono-exon FALSE canonical NA NA NA NA 22 0 NA FALSE 0 0 NA A coding 266 798 23 820 85 PB.10556.1 chr19 + 773 7 full-splice_match GPX4 rna57127 805 7 30 2 multi-exon FALSE canonical 38 918 54 2030.72302395 34 1 0 FALSE 0 0 NA A non_coding NA NA NA NA 5 PB.10549.1 chr19 - 2921 2 intergenic novelGene_52 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 994 NA 2 33 1 FALSE 0 0 NA A coding 287 861 523 1383 90 PB.11386.1 chr20 - 2648 4 full-splice_match THUMPD1 rna61652 2685 4 8 29 multi-exon FALSE canonical 47 1010 497 162.874184572 46 0 0 FALSE 0 0 NA C coding 353 1059 92 1150 80 PB.1562.1 chr2 + 2631 23 novel_in_catalog QARS novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 606 142 731.071815898 2 0 0 FALSE 0 0 NA C coding 654 1962 26 1987 15 PB.6755.1 chr11 - 1363 10 full-splice_match PHB2 rna36776 1397 10 25 9 multi-exon FALSE canonical 47 670 267 687.849547503 33 0 0 FALSE 0 0 NA C coding 299 897 141 1037 30 PB.6755.2 chr11 - 2871 8 novel_in_catalog PHB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 670 237 762.942330717 2 9 0 FALSE 0 0 NA C coding 199 597 1944 2540 25 PB.8909.3 chr14 + 1483 8 novel_in_catalog TBRG1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 39 140 647 125.343527954 15 0 0 FALSE 0 0 NA C coding 187 561 729 1289 20 PB.6990.1 chr11 - 2711 1 intergenic novelGene_1083 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.11497.1 chr20 + 1554 7 full-splice_match ORC6 rna62067 1519 7 -38 3 multi-exon FALSE canonical 24 85 171 67.7790528113 3 0 0 FALSE 0 0 NA A coding 252 756 107 862 20 PB.4619.3 chr7 - 2465 10 full-splice_match AAGAB rna24902 3658 10 -6 1199 multi-exon FALSE canonical 35 221 435 470.749402549 4 0 0 FALSE 0 0 NA C coding 206 618 690 1307 30 PB.169.1 chr1 - 1562 9 full-splice_match HMGCL rna868 1654 9 79 13 multi-exon FALSE canonical 39 427 67 209.695016631 19 1 0 FALSE 0 0 NA C coding 325 975 8 982 20 PB.169.2 chr1 - 1693 10 full-splice_match HMGCL rna869 1726 10 15 18 multi-exon FALSE canonical 27 57 73 341.720646142 10 3 0 FALSE 0 0 NA C coding 300 900 219 1118 30 PB.169.3 chr1 - 2909 7 novel_in_catalog HMGCL novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 427 65 241.269558793 5 4 0 FALSE 0 0 NA C coding 295 885 6 890 85 PB.5379.1 chr8 - 5956 3 full-splice_match VCPIP1 rna29213 8133 3 100 2077 multi-exon FALSE canonical 48 701 2914 91.4986338696 2 8 0 FALSE 0 0 NA A coding 1221 3663 121 3783 35 PB.1562.2 chr2 + 2443 24 full-splice_match QARS rna8434 2813 24 367 3 multi-exon FALSE canonical 46 606 141 759.474160192 13 2 0 FALSE 0 0 NA C coding 775 2325 25 2349 15 PB.6636.1 chr10 - 2902 7 novel_not_in_catalog DESI1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1310 445.966366445 2 3 0 TRUE 0 0 NA B coding 168 504 189 692 10 PB.6636.2 chr10 - 3031 9 novel_not_in_catalog DESI1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1442 529.790524642 3 12 0 TRUE 0 0 NA B coding 168 504 200 703 5 PB.6335.2 chr10 + 1698 2 full-splice_match FAM110A rna34535 1803 2 102 3 multi-exon FALSE canonical 12 25 148 NA 18 4 0 FALSE 0 0 NA C coding 295 885 243 1127 15 PB.6335.3 chr10 + 1594 1 novel_in_catalog FAM110A novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 9 3 NA FALSE 0 0 NA C coding 295 885 142 1026 15 PB.5975.2 chr9 - 3772 1 novel_in_catalog GOT1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.8667.1 chr14 + 3320 7 full-splice_match TRIM68 rna47098 1744 7 -108 -1468 multi-exon FALSE canonical 28 77 176 57.4195088798 2 14 0 FALSE 0 0 NA A coding 485 1455 234 1688 15 PB.11214.1 chr19 - 2580 5 full-splice_match ZNF583 rna60767 2396 5 253 -437 multi-exon FALSE canonical 33 99 120 77.7624588089 2 8 0 FALSE 0 0 NA A coding 569 1707 211 1917 35 PB.4829.3 chr7 + 1738 2 novel_in_catalog IRF9 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 1390 46 NA 3 0 0 FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.2261.9 chr3 + 2647 1 genic_intron novelGene_1445 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.7593.1 chr12 + 3282 12 full-splice_match GULP1 rna40990 3438 12 148 8 multi-exon FALSE canonical 24 92 302 115.814506863 3 1 0 FALSE 0 0 NA A coding 304 912 474 1385 55 PB.10244.1 chr17 + 4723 27 full-splice_match RB1 rna55286 4712 27 -3 -8 multi-exon FALSE canonical 42 360 2635 279.569311621 5 0 0 FALSE 0 0 NA A coding 928 2784 147 2930 25 PB.8013.3 chr13 - 3868 18 novel_not_in_catalog PPP4R3B novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 38 596.846713989 7 0 0 TRUE 0 0 NA B coding 849 2547 142 2688 50 PB.8013.2 chr13 - 4064 17 novel_not_in_catalog PPP4R3B novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 36 691.522956958 2 4 0 FALSE 0 0 NA B coding 796 2388 140 2527 20 PB.8013.1 chr13 - 2852 1 genic PPP4R3B novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA B non_coding NA NA NA NA 30 PB.9329.3 chr15 - 2646 8 full-splice_match IL33 rna50725 2699 8 44 9 multi-exon FALSE canonical 20 77 398 221.343624259 8 12 0 FALSE 0 0 NA C coding 264 792 56 847 40 PB.4103.1 chr6 + 2989 16 novel_not_in_catalog SNX2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 15 767.359759174 21 0 0 TRUE 0 0 NA C coding 519 1557 66 1622 90 PB.5568.2 chr8 + 1993 14 incomplete-splice_match PHF20L1 rna30050 5309 21 25 3291 3prime_fragment FALSE canonical 33 81 726 375.157300342 2 1 0 FALSE 0 0 NA B coding 565 1695 298 1992 70 PB.4262.1 chr6 - 2793 18 full-splice_match TNIP1 rna23066 2810 18 14 3 multi-exon FALSE canonical 15 28 83 340.161726242 21 6 0 FALSE 0 0 NA C coding 637 1911 120 2030 25 PB.8013.9 chr13 - 3780 17 novel_not_in_catalog PPP4R3B novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 53 576.680153985 8 0 0 TRUE 0 0 NA B coding 817 2451 155 2605 40 PB.5723.1 chr9 - 2528 19 full-splice_match YME1L1 rna30956 2572 19 33 11 multi-exon FALSE canonical 48 1661 174 552.343190417 174 0 0 FALSE 0 0 NA A coding 717 2151 142 2292 30 PB.5764.1 chr9 - 3055 2 novel_in_catalog C9H10orf25 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 210 340 NA 6 1 0 FALSE 0 0 NA A coding 112 336 695 1030 20 PB.1818.3 chr2 + 6089 24 novel_in_catalog SF3B1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 4691 3655 1119.06389451 11 1 0 FALSE 0 0 NA C coding 1158 3474 2288 5761 10 PB.6540.1 chr10 - 2546 8 full-splice_match PISD rna35708 2770 8 222 2 multi-exon FALSE canonical 16 25 126 280.818446688 3 2 0 FALSE 0 0 NA C coding 374 1122 331 1452 15 PB.5969.2 chr9 + 2991 12 novel_not_in_catalog ZFYVE27 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 999 138.863242077 4 2 0 TRUE 0 0 NA C coding 316 948 195 1142 0 PB.5969.3 chr9 + 2974 12 full-splice_match ZFYVE27 rna32542 3014 12 32 8 multi-exon FALSE canonical 43 207 628 99.1160935469 12 1 0 FALSE 0 0 NA C coding 409 1227 174 1400 10 PB.5969.1 chr9 + 2931 12 full-splice_match ZFYVE27 rna32544 2999 12 65 3 multi-exon FALSE canonical 43 207 595 90.9670269933 36 1 0 FALSE 0 0 NA C coding 404 1212 141 1352 0 PB.5264.1 chr8 - 4077 6 full-splice_match TRIM35 rna28608 2404 6 41 -1714 multi-exon FALSE canonical 18 32 455 68.249542123 9 6 0 FALSE 0 0 NA A coding 493 1479 21 1499 20 PB.3882.1 chr6 + 1446 7 novel_not_in_catalog FBXO4 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 183 263.180546394 3 0 0 FALSE 0 0 NA C coding 361 1083 73 1155 15 PB.3882.2 chr6 + 1478 7 full-splice_match FBXO4 rna21217 1640 7 169 -7 multi-exon FALSE canonical 41 153 217 218.526886218 9 0 0 FALSE 0 0 NA C coding 387 1161 29 1189 20 PB.5969.5 chr9 + 3279 3 novel_in_catalog ZFYVE27 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 433 1556 53.4976635004 2 2 0 FALSE 0 0 NA C coding 117 351 2365 2715 0 PB.7408.1 chr12 + 3223 1 genic_intron novelGene_223 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.2189.1 chr3 - 3329 16 full-splice_match LOC703026 rna11678 3415 16 85 1 multi-exon FALSE canonical 39 316 159 203.263375944 16 1 0 FALSE 0 0 NA A coding 732 2196 156 2351 25 PB.1477.1 chr2 - 1498 3 full-splice_match KCTD6 rna7942 1640 3 95 47 multi-exon FALSE canonical 13 32 68 94 4 3 0 FALSE 0 0 NA A coding 237 711 112 822 85 PB.4611.1 chr7 + 3971 1 antisense novelGene_SNAPC5_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.10908.1 chr19 + 3146 3 full-splice_match LRFN3 rna58852 2486 3 -652 -8 multi-exon FALSE canonical 6 7 2514 4.472135955 2 10 0 FALSE 0 0 NA A coding 628 1884 1100 2983 20 PB.8865.2 chr14 - 1642 1 genic_intron novelGene_1944 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1983.2 chr2 - 1471 3 full-splice_match CEP19 rna10602 910 3 -37 -524 multi-exon FALSE canonical 27 85 341 169 2 7 0 FALSE 0 0 NA C coding 167 501 400 900 80 PB.1983.1 chr2 - 2899 1 genic CEP19 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 11 NA FALSE 0 0 NA C non_coding NA NA NA NA 20 PB.8382.10 chr14 - 2915 22 full-splice_match CAPN1 rna45269 2896 22 -35 16 multi-exon FALSE canonical 21 45 60 383.202296444 8 4 1 FALSE 0 0 NA C coding 714 2142 62 2203 15 PB.4806.28 chr7 + 1413 7 fusion LOC710951_LOC106999340 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 399 549.642611157 2 5 0 TRUE 0 0 NA B coding 266 798 67 864 20 PB.8382.12 chr14 - 3064 15 novel_in_catalog CAPN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 358 81 371.418900973 4 3 0 FALSE 0 0 NA C coding 464 1392 83 1474 90 PB.8382.13 chr14 - 1514 7 novel_in_catalog CAPN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 358 81 408.360135175 5 0 0 FALSE 0 0 NA C coding 305 915 83 997 90 PB.5470.3 chr8 + 3017 4 novel_in_catalog VPS13B novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 268 677 58.7792480387 2 0 0 FALSE 0 0 NA B coding 303 909 265 1173 25 PB.654.2 chr1 + 3606 27 full-splice_match WDR3 rna3507 3563 27 -53 10 multi-exon FALSE canonical 24 47 140 307.935058089 4 1 0 FALSE 0 0 NA C coding 943 2829 173 3001 50 PB.8288.1 chr14 - 2428 16 full-splice_match NAP1L4 rna44815 2507 16 73 6 multi-exon FALSE canonical 44 707 1235 1604.94392425 5 1 0 FALSE 0 0 NA C coding 375 1125 76 1200 20 PB.8288.2 chr14 - 2406 15 full-splice_match NAP1L4 rna44819 1555 15 105 -956 multi-exon FALSE canonical 44 981 81 1444.48606778 4 0 0 FALSE 0 0 NA C coding 386 1158 99 1256 35 PB.1164.1 chr1 + 2700 1 genic_intron novelGene_2647 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 2 NA FALSE 0 0 NA A coding 107 321 450 770 90 PB.8288.7 chr14 - 2986 10 novel_not_in_catalog NAP1L4 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 33 1771.61790463 2 0 0 FALSE 0 0 NA C coding 303 909 51 959 90 PB.8288.6 chr14 - 2991 10 novel_in_catalog NAP1L4 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 981 37 1548.11336794 2 1 0 FALSE 0 0 NA C coding 303 909 55 963 95 PB.11315.3 chr20 + 2297 9 full-splice_match PMM2 rna61420 2281 9 -18 2 multi-exon FALSE canonical 27 97 107 283.771034463 2 2 0 FALSE 0 0 NA C coding 219 657 238 894 15 PB.8288.8 chr14 - 2718 1 novel_in_catalog NAP1L4 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 7 9 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.11315.1 chr20 + 2172 8 full-splice_match PMM2 rna61419 947 8 20 -1245 multi-exon FALSE canonical 39 228 98 226.847966709 13 0 0 FALSE 0 0 NA C coding 246 738 33 770 15 PB.3804.1 chr6 + 2726 13 full-splice_match EXOC3 rna20755 2722 13 -5 1 multi-exon FALSE canonical 40 377 2038 239.10457963 115 0 0 FALSE 0 0 NA A coding 745 2235 101 2335 50 PB.11643.7 chr20 - 3242 11 novel_not_in_catalog IST1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 3 100 779.481237747 2 3 0 TRUE 0 0 NA B coding 362 1086 974 2059 5 PB.11315.5 chr20 + 2699 6 novel_in_catalog PMM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 42 703 1191 105.123736615 2 4 0 FALSE 0 0 NA C coding 206 618 1921 2538 10 PB.11643.4 chr20 - 3750 9 novel_in_catalog IST1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 1805 371 385.493190601 3 0 0 FALSE 0 0 NA B coding 283 849 103 951 5 PB.5172.541 chr7 + 1562 8 fusion LOC708891_LOC714419 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 402 3624.2868264 3 6 0 TRUE 0 0 NA B coding 196 588 840 1427 15 PB.5172.540 chr7 + 1605 7 fusion LOC708891_LOC714419 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 434 3598.2519367 3 10 0 TRUE 0 0 NA B coding 464 1392 79 1470 15 PB.5172.543 chr7 + 1938 8 fusion LOC711872_LOC714419 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 380 3397.14291722 2 16 0 TRUE 0 0 NA B coding 375 1125 692 1816 35 PB.5172.470 chr7 + 1568 8 fusion LOC708891_LOC721089 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 397 3552.71656623 2 1 0 TRUE 0 0 NA B coding 196 588 848 1435 15 PB.5172.545 chr7 + 1529 7 fusion LOC720839_LOC714419 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 403 2920.92040289 2 24 0 TRUE 0 0 NA B coding 110 330 72 401 20 PB.5172.544 chr7 + 1613 8 fusion LOC708891_LOC714419 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 410 3624.2868264 2 6 0 TRUE 0 0 NA B coding 196 588 891 1478 15 PB.5172.547 chr7 + 1877 7 novel_not_in_catalog LOC711872 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 373 3400.12426244 2 11 0 TRUE 0 0 NA B coding 375 1125 631 1755 35 PB.5172.549 chr7 + 1909 8 novel_not_in_catalog LOC711872 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 349 3391.82826806 2 2 0 TRUE 0 0 NA B coding 591 1773 15 1787 35 PB.5058.2 chr7 - 2033 12 full-splice_match SPTLC2 rna27313 3925 12 2 1890 multi-exon FALSE canonical 41 352 213 285.753390181 5 3 0 FALSE 0 0 NA C coding 560 1680 88 1767 30 PB.593.1 chr1 + 1433 8 full-splice_match GSTM4 rna3240 819 8 -266 -348 multi-exon FALSE canonical 36 410 433 1054.33249025 2 0 0 FALSE 0 0 NA A coding 218 654 322 975 25 PB.3558.1 chr5 + 2839 11 novel_not_in_catalog ARHGAP24 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 35 201.972770442 2 2 0 TRUE 0 0 NA A coding 765 2295 44 2338 25 PB.5305.1 chr8 - 1227 4 full-splice_match TM2D2 rna28852 1482 4 3 252 multi-exon FALSE canonical 43 246 286 166.907159822 20 0 0 FALSE 0 0 NA A coding 214 642 60 701 30 PB.3425.1 chr5 - 6306 30 incomplete-splice_match PDS5A rna18607 6738 33 427 5 5prime_fragment FALSE canonical 45 645 86 231.607426479 2 3 0 FALSE 0 0 NA A coding 1153 3459 210 3668 30 PB.8728.1 chr14 - 5510 1 genic_intron novelGene_1403 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 10 NA FALSE 0 0 NA A coding 100 300 2050 2349 75 PB.1791.11 chr2 + 6131 2 genic_intron novelGene_2274 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 872 NA 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.11830.3 chrX + 3892 1 genic_intron novelGene_816 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.8003.1 chr13 + 1681 14 full-splice_match ERLEC1 rna43414 3112 14 229 1202 multi-exon FALSE canonical 47 1504 216 394.530100246 27 0 0 FALSE 0 0 NA A coding 483 1449 55 1503 25 PB.11830.1 chrX + 2879 13 full-splice_match CYBB rna63624 4339 13 72 1388 multi-exon FALSE canonical 41 1373 339 518.9017248 33 7 0 FALSE 0 0 NA C coding 570 1710 3 1712 20 PB.5686.5 chr9 - 5935 2 genic_intron novelGene_334 novel NA NA NA NA no_subcategory FALSE canonical 0 0 2266 NA 2 47 1 FALSE 0 0 NA A coding 135 405 5221 5625 95 PB.9641.3 chr16 - 1499 6 novel_in_catalog MYO18A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 16 40 50 231.397925661 2 0 0 FALSE 0 0 NA B coding 260 780 45 824 80 PB.9641.1 chr16 - 6399 40 novel_in_catalog MYO18A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 16 40 31 278.517503938 18 0 0 FALSE 0 0 NA B coding 1708 5124 26 5149 0 PB.3876.2 chr6 + 1652 1 novel_in_catalog CARD6 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA B coding 132 396 22 417 85 PB.8234.1 chr13 + 3975 15 full-splice_match POLR1B rna44512 3962 15 -25 12 multi-exon FALSE canonical 44 322 208 191.342624629 82 6 0 FALSE 0 0 NA A coding 1135 3405 32 3436 15 PB.7631.1 chr12 + 1377 1 intergenic novelGene_1598 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 16 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 35 PB.3058.3 chr4 - 3810 1 genic_intron novelGene_1671 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.4806.23 chr7 + 1344 7 fusion LOC711141_LOC710951 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 342 554.866650647 4 8 0 TRUE 0 0 NA A coding 110 330 464 793 15 PB.583.1 chr1 + 3264 22 full-splice_match KIAA1324 rna3196 3487 22 215 8 multi-exon FALSE canonical 11 114 162 216.196669725 64 0 0 FALSE 0 0 NA C coding 1011 3033 16 3048 20 PB.3058.4 chr4 - 1441 1 genic_intron novelGene_1672 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.3058.7 chr4 - 2724 1 genic_intron novelGene_1676 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 18 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.3058.6 chr4 - 2399 1 genic_intron novelGene_1674 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8187.1 chr13 + 2561 2 genic_intron novelGene_1754 novel NA NA NA NA no_subcategory FALSE canonical 2 2 107 NA 2 5 0 FALSE 0 0 NA A coding 160 480 1216 1695 10 PB.4716.1 chr7 + 1594 6 full-splice_match MRPS11 rna25520 879 6 3 -718 multi-exon FALSE canonical 41 243 75 285.482048472 2 3 0 FALSE 0 0 NA A coding 194 582 11 592 85 PB.7661.1 chr12 + 1525 1 incomplete-splice_match ADAM23 rna41335 6234 25 4624 86 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 15 PB.2458.1 chr3 + 3235 13 novel_not_in_catalog PMPCB novel NA NA NA NA any annotated donor/acceptor TRUE canonical 47 1327 106 1175.4212011 62 45 0 TRUE 0 0 NA A coding 403 1209 8 1216 65 PB.3798.1 chr5 + 3011 1 intergenic novelGene_2600 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.7528.1 chr12 + 1613 1 genic_intron novelGene_1149 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5610.1 chr8 + 1850 10 novel_in_catalog GPAA1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 10 10 1160 191.874959283 2 0 0 FALSE 0 0 NA C coding 348 1044 151 1194 15 PB.2073.2 chr3 + 3444 1 novel_in_catalog CRYZL1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 6 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.2073.1 chr3 + 1611 13 full-splice_match CRYZL1 rna11056 2140 13 522 7 multi-exon FALSE canonical 40 287 83 156.108936323 5 1 0 FALSE 0 0 NA C coding 349 1047 90 1136 25 PB.5610.2 chr8 + 2050 12 full-splice_match GPAA1 rna30308 2004 12 -44 -2 multi-exon FALSE canonical 14 17 171 189.23530326 24 0 0 FALSE 0 0 NA C coding 621 1863 98 1960 10 PB.2812.5 chr4 - 2347 6 novel_in_catalog LOC100426197 novel NA NA NA NA combination_of_known_junctions FALSE canonical 38 622 1928 10488.9830298 4 6 0 FALSE 0 0 NA B coding 186 558 28 585 15 PB.2812.6 chr4 - 1432 8 novel_not_in_catalog LOC100426197 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 544 10331.0756942 2 8 0 FALSE 0 0 NA B coding 328 984 28 1011 25 PB.6747.6 chr11 + 1424 1 incomplete-splice_match CD4 rna36735 2680 7 1244 13 mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 35 PB.6747.1 chr11 + 2977 10 full-splice_match CD4 rna36731 3134 10 141 16 multi-exon FALSE canonical 32 421 1390 241.704364876 107 3 0 FALSE 0 0 NA C coding 458 1374 113 1486 40 PB.2812.1 chr4 - 1522 8 novel_not_in_catalog LOC100426197 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1107 9681.57549162 1153 19 0 TRUE 0 0 NA B coding 201 603 501 1103 25 PB.6747.3 chr11 + 2937 9 novel_in_catalog CD4 novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 421 1347 256.32011236 2 1 0 FALSE 0 0 NA C coding 458 1374 70 1443 35 PB.2812.3 chr4 - 1453 8 novel_not_in_catalog LOC100426197 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 365 10014.311509 91 17 2 TRUE 0 0 NA B coding 201 603 431 1033 25 PB.7883.5 chr13 + 1992 16 full-splice_match HADHB rna42776 2183 16 188 3 multi-exon FALSE canonical 48 3688 1209 1705.40669636 124 0 0 FALSE 0 0 NA A coding 475 1425 58 1482 25 PB.7883.4 chr13 + 2588 2 novel_in_catalog GAREM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 10 15 173 NA 2 6 0 FALSE 0 0 NA A coding 99 297 1240 1536 10 PB.8720.1 chr14 + 2584 2 full-splice_match TSKU rna47352 2677 2 80 13 multi-exon FALSE canonical 4 6 78 NA 6 7 0 FALSE 0 0 NA A coding 353 1059 87 1145 35 PB.2812.8 chr4 - 1459 8 fusion LOC100426197_LOC106992293 novel NA NA NA NA no_subcategory FALSE canonical 12 68 296 10165.2409711 2 21 0 FALSE 0 0 NA A coding 201 603 436 1038 25 PB.2812.9 chr4 - 1468 8 novel_not_in_catalog LOC100426197 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 382 10014.311509 3 13 0 TRUE 0 0 NA B coding 201 603 446 1048 25 PB.5868.2 chr9 + 2853 18 novel_in_catalog HERC4 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 6 6 1395 408.486229878 2 0 0 FALSE 0 0 NA C coding 382 1146 250 1395 80 PB.1253.3 chr2 + 3328 9 full-splice_match NXPE3 rna6840 3336 9 5 3 multi-exon FALSE canonical 4 4 87 195.780489324 2 3 0 FALSE 0 0 NA C coding 559 1677 770 2446 15 PB.10733.1 chr19 - 1384 1 novel_in_catalog LOC100427466 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.10045.2 chr16 - 3471 15 novel_in_catalog EXOC7 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 470 2014 346.525612329 3 2 0 FALSE 0 0 NA C coding 393 1179 84 1262 5 PB.10045.3 chr16 - 2700 16 novel_in_catalog EXOC7 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 470 2004 350.893146129 3 4 0 FALSE 0 0 NA C coding 393 1179 74 1252 5 PB.10045.4 chr16 - 2855 6 novel_in_catalog EXOC7 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 997 142 220.558382294 18 2 0 FALSE 0 0 NA C coding 283 849 83 931 75 PB.5670.1 chr9 - 3196 1 genic_intron novelGene_267 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 15 NA FALSE 0 0 NA B coding 145 435 1653 2087 85 PB.6825.1 chr11 - 1542 1 genic_intron novelGene_458 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.7902.4 chr13 + 3313 13 full-splice_match ZNF512 rna42902 3424 13 104 7 multi-exon FALSE canonical 35 116 70 340.033821847 6 1 0 FALSE 0 0 NA C coding 487 1461 219 1679 30 PB.10158.1 chr17 + 1906 3 novel_not_in_catalog POLR1D novel NA NA NA NA any annotated donor/acceptor FALSE canonical 43 666 188 125 11 6 0 TRUE 0 0 NA A coding 122 366 88 453 15 PB.1253.1 chr2 + 3153 8 full-splice_match NXPE3 rna6839 3169 8 13 3 multi-exon TRUE canonical 31 67 110 159.77171214 20 5 0 FALSE 0 0 NA C coding 559 1677 592 2268 10 PB.7902.1 chr13 + 3405 14 full-splice_match ZNF512 rna42901 3483 14 68 10 multi-exon FALSE canonical 43 291 165 318.79303631 15 0 0 FALSE 0 0 NA C coding 566 1698 77 1774 30 PB.7902.3 chr13 + 3225 12 novel_in_catalog ZNF512 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 2 2 1288 378.515521478 3 1 0 FALSE 0 0 NA C coding 512 1536 56 1591 30 PB.7902.2 chr13 + 2922 1 novel_in_catalog ZNF512 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 95 PB.40.1 chr1 - 864 4 full-splice_match RPL22 rna241 1785 4 -2 923 multi-exon FALSE canonical 42 10212 35 7562.09408828 6 2 0 FALSE 0 0 NA C coding 128 384 24 407 15 PB.1369.1 chr2 - 3299 6 full-splice_match GATA2 rna7340 3324 6 17 8 multi-exon FALSE canonical 0 0 219 62.7056616264 2 20 0 FALSE 0 0 NA A coding 480 1440 265 1704 10 PB.2528.1 chr3 - 3073 23 full-splice_match TNPO3 rna13690 4313 23 331 909 multi-exon FALSE canonical 44 406 2818 226.647303094 68 0 0 FALSE 0 0 NA C coding 923 2769 16 2784 55 PB.40.2 chr1 - 1716 1 genic RPL22 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 20 PB.2283.1 chr3 - 2465 17 full-splice_match GARS rna12227 2632 17 158 9 multi-exon FALSE canonical 32 128 298 195.19477452 7 1 0 FALSE 0 0 NA C coding 738 2214 80 2293 35 PB.2283.2 chr3 - 2575 18 novel_not_in_catalog GARS novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 298 237.196121385 3 5 0 FALSE 0 0 NA C coding 616 1848 564 2411 45 PB.3017.2 chr4 - 3777 18 incomplete-splice_match COL12A1 rna16554 8394 51 4612 5 5prime_fragment FALSE canonical 29 255 1314 71.7774337797 2 0 0 FALSE 0 0 NA A coding 254 762 801 1562 15 PB.175.2 chr1 + 2614 6 novel_in_catalog NIPAL3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 38 306 416 217.354549067 11 0 0 FALSE 0 0 NA C coding 189 567 324 890 80 PB.175.1 chr1 + 3978 12 full-splice_match NIPAL3 rna901 5415 12 53 1384 multi-exon FALSE canonical 38 306 451 158.804911763 53 5 0 FALSE 0 0 NA C coding 406 1218 359 1576 70 PB.12049.1 chrX + 1569 1 full-splice_match SOWAHD rna64917 1609 1 36 4 mono-exon FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA A coding 315 945 37 981 25 PB.10829.1 chr19 - 1798 11 full-splice_match ISYNA1 rna58385 1834 11 42 -6 multi-exon FALSE canonical 7 10 12 239.384627744 10 1 0 FALSE 0 0 NA A coding 559 1677 22 1698 10 PB.2415.2 chr3 + 5569 6 full-splice_match ZKSCAN1 rna13067 4478 6 35 -1126 multi-exon FALSE canonical 44 496 111 207.366824733 2 10 0 FALSE 0 0 NA C coding 562 1686 203 1888 75 PB.5858.2 chr9 - 856 1 genic_intron novelGene_1269 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 0 NA FALSE 0 0 NA A coding 101 303 554 856 65 PB.1528.1 chr2 + 5515 24 novel_not_in_catalog VPRBP novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 177 229.699804092 5 13 0 TRUE 0 0 NA A coding 1438 4314 276 4589 10 PB.10503.1 chr18 - 3088 11 full-splice_match VPS4B rna56880 2041 11 -45 -1002 multi-exon FALSE canonical 48 825 1234 260.470727722 201 2 0 FALSE 0 0 NA A coding 444 1332 143 1474 40 PB.3192.1 chr4 - 1711 1 genic_intron novelGene_2221 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.5812.1 chr9 + 2734 1 genic_intron novelGene_1169 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1878.1 chr2 - 1936 9 full-splice_match SH3BP5 rna10051 2955 9 208 811 multi-exon FALSE canonical 48 1129 484 502.377348215 105 0 0 FALSE 0 0 NA C coding 455 1365 155 1519 65 PB.5161.1 chr7 - 3758 4 full-splice_match TMEM179 rna28006 1077 4 320 -3001 multi-exon FALSE canonical 7 22 335 17.2626765016 3 18 0 FALSE 0 0 NA A coding 233 699 31 729 0 PB.5903.1 chr9 - 3010 1 antisense novelGene_PTEN_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 10 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.9272.1 chr15 + 1217 10 full-splice_match STOML2 rna50302 1261 10 48 -4 multi-exon FALSE canonical 24 45 53 660.954612663 12 0 0 FALSE 0 0 NA A coding 356 1068 9 1076 25 PB.12202.1 chrUn_NW_014995054v1 - 1520 1 intergenic novelGene_8 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 38 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 60 PB.6341.1 chr10 - 2717 5 full-splice_match SIRPB2 rna34568 3562 5 111 734 multi-exon FALSE canonical 23 44 976 65.9469483752 10 0 0 FALSE 0 0 NA C coding 367 1101 43 1143 80 PB.1707.3 chr2 + 3496 6 novel_in_catalog DCUN1D1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 4130 518 782.367560677 3 1 0 FALSE 0 0 NA C coding 244 732 44 775 35 PB.10182.2 chr17 + 5715 31 incomplete-splice_match FRY rna54956 14808 61 6019 3074 internal_fragment TRUE canonical 41 284 664 196.369549574 2 3 0 FALSE 0 0 NA B coding 1685 5055 58 5112 35 PB.2447.1 chr3 + 1696 1 genic_intron novelGene_2158 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.3719.2 chr5 - 3134 1 genic_intron novelGene_2349 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.10182.7 chr17 + 2971 11 incomplete-splice_match FRY rna54956 14808 61 9340 2497 internal_fragment FALSE canonical 46 387 1221 228.862404077 13 1 0 FALSE 0 0 NA B coding 568 1704 88 1791 40 PB.10182.4 chr17 + 3281 1 genic_intron novelGene_271 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.11609.1 chr20 - 3066 1 genic_intron novelGene_1093 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 14 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.10527.1 chr18 - 1628 1 novel_in_catalog MBP novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 22 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 75 PB.10527.3 chr18 - 6117 1 genic_intron novelGene_1343 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 12 13 NA FALSE 0 0 NA A coding 143 429 2089 2517 85 PB.10527.2 chr18 - 1471 4 novel_not_in_catalog MBP novel NA NA NA NA any annotated donor/acceptor FALSE canonical 25 82 203 356.998599437 91 0 0 TRUE 0 0 NA B coding 197 591 238 828 80 PB.5836.3 chr9 - 1125 4 full-splice_match ANAPC16 rna31845 1280 4 20 135 multi-exon FALSE canonical 46 559 75 781.186277401 2 0 0 FALSE 0 0 NA C coding 110 330 103 432 30 PB.5836.2 chr9 - 962 3 novel_in_catalog ANAPC16 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 34 120 75 1171.4998933 2 0 0 FALSE 0 0 NA C non_coding NA NA NA NA 15 PB.5836.1 chr9 - 1438 5 novel_in_catalog ANAPC16 novel NA NA NA NA combination_of_known_junctions FALSE canonical 45 377 90 877.296985063 5 2 0 FALSE 0 0 NA C coding 110 330 408 737 15 PB.10527.6 chr18 - 2737 1 intergenic novelGene_1346 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 5 NA FALSE 0 0 NA A coding 101 303 513 815 75 PB.1634.3 chr2 - 1437 13 incomplete-splice_match NKTR rna8790 7205 18 -10 5778 internal_fragment FALSE canonical 36 107 122 529.242855408 6 0 0 FALSE 0 0 NA B coding 430 1290 146 1435 65 PB.1326.2 chr2 - 3080 12 incomplete-splice_match GOLGB1 rna7140 11217 21 142 7995 internal_fragment FALSE canonical 39 599 110 344.589610987 7 1 0 FALSE 0 0 NA B coding 989 2967 113 3079 40 PB.1326.1 chr2 - 3247 13 incomplete-splice_match GOLGB1 rna7145 11340 22 143 7950 internal_fragment FALSE canonical 33 495 768 376.152894446 6 0 0 FALSE 0 0 NA B coding 1045 3135 112 3246 75 PB.871.1 chr1 + 1478 7 full-splice_match SDE2 rna4749 2007 7 188 341 multi-exon FALSE canonical 46 389 130 172.563031962 12 0 0 FALSE 0 0 NA C coding 451 1353 11 1363 25 PB.1101.1 chr1 + 1424 9 novel_not_in_catalog SELL novel NA NA NA NA any annotated donor/acceptor FALSE canonical 32 5914 24 1640.57276584 808 0 0 TRUE 0 0 NA B coding 372 1116 22 1137 30 PB.10370.1 chr17 - 1386 8 fusion LOC106994403_GRTP1 novel NA NA NA NA no_subcategory FALSE canonical 0 0 997 92.8601098427 3 0 0 TRUE 0 0 NA A coding 336 1008 77 1084 40 PB.1077.12 chr1 - 2559 1 genic_intron novelGene_2614 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.5606.1 chr8 - 3405 11 full-splice_match PARP10 rna30295 3472 11 45 22 multi-exon FALSE canonical 16 23 2784 137.207871494 66 1 0 FALSE 0 0 NA C coding 1019 3057 72 3128 20 PB.5606.2 chr8 - 3588 10 novel_in_catalog PARP10 novel NA NA NA NA combination_of_known_junctions FALSE canonical 16 23 2966 114.764977236 2 3 0 FALSE 0 0 NA C coding 604 1812 58 1869 25 PB.6818.1 chr11 - 2664 12 full-splice_match WBP11 rna37070 2666 12 -12 14 multi-exon FALSE canonical 28 134 1658 198.01262586 123 1 0 FALSE 0 0 NA A coding 641 1923 167 2089 35 PB.12141.1 chrX - 1934 12 full-splice_match MPP1 rna65665 1998 12 61 3 multi-exon FALSE canonical 46 863 833 222.335332325 16 0 0 FALSE 0 0 NA A coding 466 1398 50 1447 20 PB.7367.4 chr11 - 1277 3 novel_not_in_catalog UBC novel NA NA NA NA any annotated donor/acceptor TRUE canonical 29 135 1104 13639.4999908 11 0 0 TRUE 0 0 NA C coding 381 1143 68 1210 15 PB.7339.1 chr11 - 2054 16 full-splice_match CAMKK2 rna39590 4908 16 8 2846 multi-exon FALSE canonical 10 14 113 204.342849153 13 3 0 FALSE 0 0 NA C coding 541 1623 173 1795 85 PB.10723.1 chr19 - 1498 8 full-splice_match ECSIT rna57906 1697 8 26 173 multi-exon FALSE canonical 39 446 82 529.625339273 40 0 0 FALSE 0 0 NA A coding 430 1290 106 1395 0 PB.2414.1 chr3 - 2790 6 full-splice_match TRIM4 rna13061 2904 6 64 50 multi-exon FALSE canonical 44 363 521 237.928560707 84 0 0 FALSE 0 0 NA A coding 474 1422 129 1550 25 PB.11489.1 chr20 + 1780 11 full-splice_match TGFB1I1 rna62032 1779 11 -2 1 multi-exon FALSE canonical 5 5 1133 36.4828726939 27 2 0 FALSE 0 0 NA A coding 461 1383 15 1397 0 PB.6280.2 chr10 + 3428 1 genic_intron novelGene_621 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11506.1 chr20 - 3085 7 full-splice_match N4BP1 rna62113 7119 7 231 3803 multi-exon FALSE canonical 39 146 212 186.410836595 2 5 0 FALSE 0 0 NA A coding 896 2688 15 2702 40 PB.8312.10 chr14 - 2839 20 novel_not_in_catalog TCIRG1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 2511 108.055541274 4 10 0 TRUE 0 0 NA B coding 747 2241 110 2350 15 PB.8312.12 chr14 - 2748 20 novel_not_in_catalog TCIRG1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2362 108.055541274 2 7 0 TRUE 0 0 NA B coding 747 2241 85 2325 15 PB.14.2 chr1 - 1074 5 full-splice_match SSU72 rna93 1156 5 183 -101 multi-exon FALSE canonical 45 1192 185 663.481725445 4 0 0 FALSE 0 0 NA C coding 194 582 106 687 15 PB.7216.3 chr11 + 4203 28 full-splice_match POLR3B rna39144 4130 28 -70 -3 multi-exon FALSE canonical 34 188 2458 101.14840582 8 0 0 FALSE 0 0 NA A coding 1133 3399 166 3564 10 PB.14.1 chr1 - 5548 3 genic SSU72 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 5448 0 2 14 0 TRUE 0 0 NA C coding 168 504 1987 2490 10 PB.6074.1 chr9 + 5718 2 novel_in_catalog INPP5F novel NA NA NA NA combination_of_known_junctions FALSE canonical 28 58 188 NA 2 11 0 FALSE 0 0 NA B non_coding NA NA NA NA 75 PB.4908.1 chr7 + 1403 8 full-splice_match TMX1 rna26555 2522 8 123 996 multi-exon FALSE canonical 48 1221 463 225.472836501 18 1 0 FALSE 0 0 NA A coding 280 840 21 860 45 PB.3352.1 chr5 + 2847 11 full-splice_match TRMT44 rna18263 2872 11 23 2 multi-exon FALSE canonical 27 73 2062 83.7257427557 3 0 0 FALSE 0 0 NA A coding 757 2271 19 2289 25 PB.1148.4 chr1 - 2886 19 full-splice_match TTC13 rna6256 2890 19 -4 8 multi-exon FALSE canonical 31 55 554 231.462739982 2 10 1 FALSE 0 0 NA C coding 731 2193 42 2234 20 PB.5825.2 chr9 + 1704 12 novel_not_in_catalog ANXA7 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 48 1576.47327919 2 1 0 FALSE 0 0 NA B coding 318 954 439 1392 30 PB.2845.1 chr4 + 1689 9 full-splice_match PPT2 rna15573 3279 9 1586 4 multi-exon FALSE canonical 18 35 77 133.633828053 7 2 0 FALSE 0 0 NA C coding 302 906 86 991 15 PB.2845.2 chr4 + 1804 9 novel_in_catalog PPT2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 18 32 191 134.246042772 3 1 0 FALSE 0 0 NA C coding 302 906 200 1105 15 PB.679.1 chr1 - 1542 12 novel_in_catalog POLR3C novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 16 30 1390 172.177234267 2 0 0 FALSE 0 0 NA B coding 411 1233 170 1402 25 PB.11002.4 chr19 - 3365 8 novel_not_in_catalog CEACAM1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1316 54.1294744109 10 5 0 FALSE 0 0 NA B coding 148 444 1013 1456 35 PB.6355.1 chr10 + 2740 24 full-splice_match VPS16 rna34627 2724 24 -10 -6 multi-exon FALSE canonical 47 496 1268 249.168617607 70 0 0 FALSE 0 0 NA C coding 839 2517 66 2582 20 PB.6355.2 chr10 + 2817 23 novel_in_catalog VPS16 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 496 1268 254.750858684 4 3 0 FALSE 0 0 NA C coding 583 1749 66 1814 20 PB.6355.3 chr10 + 3127 23 novel_in_catalog VPS16 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 496 1266 250.97410225 3 1 0 FALSE 0 0 NA C coding 547 1641 64 1704 25 PB.6355.4 chr10 + 3223 20 novel_in_catalog VPS16 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 613 565 250.11397402 3 1 0 FALSE 0 0 NA C coding 517 1551 52 1602 20 PB.11002.1 chr19 - 3446 9 novel_in_catalog CEACAM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 11 50 1452 34.2198772645 5 1 0 FALSE 0 0 NA B coding 211 633 1022 1654 25 PB.8361.1 chr14 - 1254 10 full-splice_match CTSW rna45181 1505 10 231 20 multi-exon FALSE canonical 20 71 110 41.3037528561 10 0 0 FALSE 0 0 NA A coding 375 1125 24 1148 45 PB.11002.3 chr19 - 3134 7 novel_in_catalog CEACAM1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 3 11 1068 54.027770637 7 1 0 FALSE 0 0 NA B coding 100 300 112 411 30 PB.6810.2 chr11 + 2978 11 novel_not_in_catalog DDX47 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 10 11 764 390.43309286 2 2 0 FALSE 0 0 NA C coding 252 756 15 770 40 PB.6810.3 chr11 + 2854 10 novel_in_catalog DDX47 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 660 2101 237.629964441 3 8 0 FALSE 0 0 NA C coding 222 666 8 673 45 PB.11957.1 chrX - 2809 4 full-splice_match LOC106995248 rna64353 1594 4 13 -1228 multi-exon FALSE canonical 47 443 185 426.078631241 3 8 0 FALSE 0 0 NA C non_coding NA NA NA NA 95 PB.6810.1 chr11 + 1794 12 full-splice_match DDX47 rna37026 1890 12 88 8 multi-exon FALSE canonical 44 497 757 279.635477005 35 0 0 FALSE 0 0 NA C coding 455 1365 8 1372 40 PB.4858.2 chr7 - 2785 3 novel_not_in_catalog CFL2 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 267 371 2 9 0 TRUE 0 0 NA C non_coding NA NA NA NA 40 PB.5808.1 chr9 - 2844 1 genic_intron novelGene_1161 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.3732.2 chr5 + 2921 9 novel_not_in_catalog ARFIP1 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 40 444 392 119.874934828 97 0 0 FALSE 0 0 NA A coding 373 1119 95 1213 25 PB.309.1 chr1 + 1385 1 genic_intron novelGene_836 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A coding 45 135 160 294 80 PB.1205.9 chr1 + 3528 11 full-splice_match CNST rna6497 5204 11 190 1486 multi-exon FALSE canonical 34 93 93 215.54117936 12 5 0 FALSE 0 0 NA C coding 725 2175 145 2319 65 PB.10728.1 chr19 - 2669 4 full-splice_match ZNF823 rna57922 2166 4 123 -626 multi-exon FALSE canonical 35 143 77 124.563236952 2 2 0 FALSE 0 0 NA A coding 610 1830 75 1904 20 PB.9129.2 chr15 + 3951 9 full-splice_match TRAF1 rna49571 4494 9 16 527 multi-exon FALSE canonical 7 9 300 52.1536192416 2 0 0 FALSE 0 0 NA C coding 416 1248 666 1913 30 PB.3943.1 chr6 - 1556 12 full-splice_match DIMT1 rna21440 2204 12 53 595 multi-exon FALSE canonical 38 129 209 91.4275669588 17 0 0 FALSE 0 0 NA A coding 313 939 131 1069 25 PB.10482.1 chr18 + 4103 30 full-splice_match NEDD4L rna56782 9506 30 1208 4195 multi-exon FALSE canonical 11 41 1172 273.373371051 8 5 0 FALSE 0 0 NA A coding 854 2562 411 2972 20 PB.9129.1 chr15 + 2859 1 novel_in_catalog TRAF1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 11 1 NA FALSE 0 0 NA C coding 12 36 460 495 90 PB.6925.3 chr11 - 2796 1 novel_in_catalog PRKAG1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C coding 148 444 619 1062 95 PB.6925.2 chr11 - 1670 12 full-splice_match PRKAG1 rna37709 1657 12 -1 -12 multi-exon FALSE canonical 40 803 63 205.732836465 15 1 0 FALSE 0 0 NA C coding 331 993 55 1047 15 PB.6925.1 chr11 - 1548 11 novel_in_catalog PRKAG1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 31 285 95 332.708581194 2 2 1 FALSE 0 0 NA C coding 280 840 81 920 15 PB.10482.4 chr18 + 1634 1 genic_intron novelGene_999 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.2180.1 chr3 + 1514 11 full-splice_match RFC2 rna11642 1267 11 5 -252 multi-exon FALSE canonical 38 128 124 111.485425056 25 2 0 FALSE 0 0 NA A coding 352 1056 18 1073 20 PB.1086.1 chr1 + 1953 1 incomplete-splice_match TNFSF4 rna5977 6130 8 34 4144 mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8887.4 chr14 + 3325 1 genic_intron novelGene_1953 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 13 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.234.1 chr1 + 2569 3 novel_not_in_catalog RAB42 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 8 30 239 8 2 3 0 TRUE 0 0 NA A coding 218 654 7 660 25 PB.791.1 chr1 + 2066 7 full-splice_match PRCC rna4364 2083 7 54 -37 multi-exon FALSE canonical 30 137 704 133.011277717 16 4 0 FALSE 0 0 NA A coding 491 1473 237 1709 25 PB.11936.1 chrX - 5536 25 full-splice_match ZMYM3 rna64274 5573 25 35 2 multi-exon FALSE canonical 26 130 2543 71.526218969 9 0 0 FALSE 0 0 NA C coding 1371 4113 132 4244 0 PB.937.9 chr1 - 1682 1 incomplete-splice_match CD46 rna5114 3028 12 1336 11 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 25 PB.937.8 chr1 - 3147 12 full-splice_match CD46 rna5115 3128 12 -29 10 multi-exon FALSE canonical 43 261 166 1231.66797474 2 1 0 FALSE 0 0 NA C coding 365 1095 127 1221 25 PB.11461.1 chr20 + 1445 3 full-splice_match PAGR1 rna61930 1105 3 -290 -50 multi-exon FALSE canonical 42 437 872 7 22 1 0 FALSE 0 0 NA A coding 254 762 391 1152 30 PB.8369.7 chr14 + 3168 2 novel_in_catalog MAP3K11 novel NA NA NA NA combination_of_known_junctions FALSE canonical 19 47 2308 NA 3 4 0 FALSE 0 0 NA C coding 251 753 1891 2643 20 PB.8369.6 chr14 + 1782 5 novel_in_catalog MAP3K11 novel NA NA NA NA combination_of_known_junctions FALSE canonical 19 47 921 132.423562858 2 0 0 FALSE 0 0 NA C coding 263 789 468 1256 20 PB.8369.5 chr14 + 2585 10 novel_not_in_catalog MAP3K11 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 2 259 135.897019835 2 1 0 FALSE 0 0 NA C coding 590 1770 292 2061 20 PB.8369.4 chr14 + 3684 10 novel_not_in_catalog MAP3K11 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 1949 144.582156575 2 8 0 FALSE 0 0 NA C coding 539 1617 461 2077 20 PB.937.5 chr1 - 3155 11 full-splice_match CD46 rna5110 3214 11 49 10 multi-exon FALSE canonical 47 1723 511 871.00516646 71 0 0 FALSE 0 0 NA C coding 369 1107 123 1229 25 PB.8369.2 chr14 + 2789 10 full-splice_match MAP3K11 rna45222 3557 10 768 0 multi-exon FALSE canonical 12 15 1213 142.435950518 146 0 0 FALSE 0 0 NA C coding 678 2034 232 2265 20 PB.8369.1 chr14 + 5876 1 novel_in_catalog MAP3K11 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 37 0 NA FALSE 0 0 NA C coding 272 816 461 1276 90 PB.2224.8 chr3 - 3055 2 novel_in_catalog CCM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 189 126 NA 4 0 0 FALSE 0 0 NA C coding 105 315 576 890 75 PB.1276.1 chr2 - 1525 1 genic_intron novelGene_751 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.4584.1 chr7 - 839 5 full-splice_match PPIB rna24784 1006 5 92 75 multi-exon FALSE canonical 48 4646 120 2175.84144643 4 0 0 FALSE 0 0 NA A coding 208 624 10 633 25 PB.2384.2 chr3 - 5795 2 full-splice_match SAMD9 rna12861 6800 2 55 950 multi-exon FALSE canonical 37 350 125 NA 27 0 0 FALSE 0 0 NA C coding 1588 4764 134 4897 80 PB.2460.1 chr3 - 1904 14 full-splice_match ORC5 rna13285 1900 14 -15 11 multi-exon FALSE canonical 43 550 1250 192.660322848 8 0 0 FALSE 0 0 NA C coding 435 1305 102 1406 35 PB.1892.1 chr2 + 3151 1 antisense novelGene_SATB1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 9 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.6787.1 chr11 + 1424 7 full-splice_match CLEC12A rna36920 1923 7 496 3 multi-exon FALSE canonical 21 219 60 147.180161707 3 1 0 FALSE 0 0 NA A coding 258 774 81 854 35 PB.11034.1 chr19 + 4069 1 novel_in_catalog FOSB novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA B coding 128 384 2653 3036 90 PB.758.1 chr1 + 1508 5 incomplete-splice_match EFNA1 rna4150 2842 6 1329 5 internal_fragment FALSE canonical 30 552 194 161.465166522 38 4 0 FALSE 0 0 NA A coding 205 615 103 717 15 PB.10808.1 chr19 - 2300 6 full-splice_match PLVAP rna58293 2825 6 518 7 multi-exon FALSE canonical 23 175 1376 239.841614404 9 0 0 FALSE 0 0 NA A coding 442 1326 55 1380 35 PB.3063.1 chr4 + 3933 6 novel_in_catalog FHL5 novel NA NA NA NA combination_of_known_junctions FALSE canonical 21 356 242 558.507833428 3 1 0 FALSE 0 0 NA A coding 284 852 255 1106 65 PB.4713.19 chr7 + 3136 21 novel_not_in_catalog AKAP13 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 37 209 648 601.877063859 64 1 0 FALSE 0 0 NA B coding 1041 3123 12 3134 70 PB.4713.16 chr7 + 1966 1 novel_in_catalog AKAP13 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.4713.17 chr7 + 1816 1 novel_in_catalog AKAP13 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA B non_coding NA NA NA NA 95 PB.4713.14 chr7 + 6330 1 genic_intron novelGene_1280 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.8126.1 chr13 + 676 3 full-splice_match VAMP8 rna44027 617 3 -43 -16 multi-exon FALSE canonical 45 1807 221 17.4928556845 3 6 0 FALSE 0 0 NA A coding 100 300 60 359 20 PB.8990.1 chr15 - 3050 14 full-splice_match WDR5 rna48914 3047 14 -8 5 multi-exon FALSE canonical 11 14 90 204.178843174 3 4 0 FALSE 0 0 NA A coding 334 1002 132 1133 20 PB.1237.1 chr2 - 3132 1 incomplete-splice_match DCBLD2 rna6755 6070 16 2740 199 mono-exon FALSE canonical NA NA NA NA 6 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 30 PB.6104.3 chr9 + 1720 7 full-splice_match BCCIP rna33296 1085 7 -12 -623 multi-exon FALSE canonical 47 692 789 708.80674376 4 1 0 FALSE 0 0 NA C coding 314 942 16 957 20 PB.5065.1 chr7 + 1854 2 full-splice_match GPR65 rna27404 2034 2 -13 193 multi-exon FALSE canonical 37 477 85 NA 8 1 0 FALSE 0 0 NA A coding 337 1011 540 1550 0 PB.10310.1 chr17 - 3636 21 novel_in_catalog RBM26 novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 137 1295 349.635524511 2 5 0 FALSE 0 0 NA B coding 988 2964 20 2983 90 PB.2224.1 chr3 - 1808 10 full-splice_match CCM2 rna11953 1879 10 53 18 multi-exon FALSE canonical 46 208 116 364.612122673 11 2 0 FALSE 0 0 NA C coding 444 1332 87 1418 20 PB.9282.1 chr15 - 2617 7 full-splice_match UBAP1 rna50389 2492 7 -147 22 multi-exon FALSE canonical 44 226 202 344.923179853 94 0 0 FALSE 0 0 NA C coding 502 1506 210 1715 55 PB.9282.2 chr15 - 2652 6 full-splice_match UBAP1 rna50386 2728 6 68 8 multi-exon FALSE canonical 13 16 191 414.019323221 2 0 0 FALSE 0 0 NA C coding 401 1203 461 1663 25 PB.11013.2 chr19 + 3392 5 novel_in_catalog ZNF224 novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 157 130 182.863336949 2 0 0 FALSE 0 0 NA B coding 707 2121 199 2319 35 PB.2946.2 chr4 + 2831 15 novel_in_catalog PPP2R5D novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 16 24 1643 370.274222705 8 0 0 FALSE 0 0 NA C coding 563 1689 90 1778 25 PB.7056.1 chr11 - 3026 20 novel_not_in_catalog AVIL novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 271 5.74456264654 2 0 0 TRUE 0 0 NA B coding 819 2457 131 2587 40 PB.11013.1 chr19 + 1564 1 genic ZNF224 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 17 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.2224.3 chr3 - 1620 9 full-splice_match CCM2 rna11956 1686 9 49 17 multi-exon FALSE canonical 32 189 101 390.461265685 6 0 0 FALSE 0 0 NA C coding 408 1224 6 1229 25 PB.9960.2 chr16 - 2640 1 incomplete-splice_match GNA13 rna54006 6288 4 2224 1425 mono-exon FALSE canonical NA NA NA NA 5 9 NA FALSE 0 0 NA C non_coding NA NA NA NA 50 PB.3305.1 chr5 + 1775 11 full-splice_match TMEM175 rna18016 1855 11 76 4 multi-exon FALSE canonical 7 10 77 132.721512951 2 1 0 FALSE 0 0 NA A coding 504 1512 109 1620 20 PB.2992.2 chr4 - 3107 8 novel_not_in_catalog BMP5 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 21 263.821909628 7 2 0 TRUE 0 0 NA A coding 454 1362 73 1434 5 PB.599.1 chr1 + 3035 2 full-splice_match RBM15 rna3265 3361 2 152 174 multi-exon FALSE canonical 46 320 2834 NA 12 4 0 FALSE 0 0 NA C coding 925 2775 104 2878 50 PB.9960.1 chr16 - 3813 4 full-splice_match GNA13 rna54005 6341 4 182 2346 multi-exon TRUE canonical 48 955 386 125.821301853 19 11 0 FALSE 0 0 NA C coding 377 1131 104 1234 25 PB.599.2 chr1 + 5602 3 novel_not_in_catalog RBM15 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 29 136 4416 92 2 16 0 TRUE 0 0 NA C coding 925 2775 107 2881 90 PB.2911.2 chr4 + 4504 24 novel_in_catalog CMTR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 28 107 2671 269.492114912 2 6 0 FALSE 0 0 NA C coding 731 2193 115 2307 10 PB.2911.3 chr4 + 5681 21 novel_in_catalog CMTR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 45 477 88 222.892350699 2 14 0 FALSE 0 0 NA C coding 433 1299 95 1393 10 PB.6374.1 chr10 + 2432 2 full-splice_match PRNP rna34709 3049 2 616 1 multi-exon FALSE canonical 41 1092 52 NA 7 2 0 FALSE 0 0 NA A coding 253 759 63 821 15 PB.2911.1 chr4 + 3980 24 full-splice_match CMTR1 rna15883 4011 24 27 4 multi-exon FALSE canonical 45 477 105 222.96188015 49 0 0 FALSE 0 0 NA C coding 835 2505 112 2616 10 PB.3234.1 chr4 - 1087 2 full-splice_match FAM26F rna17611 1269 2 179 3 multi-exon FALSE canonical 21 78 595 NA 3 0 0 FALSE 0 0 NA A coding 315 945 71 1015 10 PB.2911.4 chr4 + 1370 1 novel_in_catalog CMTR1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.2911.5 chr4 + 2895 15 novel_in_catalog CMTR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 45 563 217 132.483961293 4 0 0 FALSE 0 0 NA C coding 474 1422 109 1530 10 PB.7648.1 chr12 + 1573 1 incomplete-splice_match CD28 rna41295 4678 4 2025 1081 mono-exon FALSE canonical NA NA NA NA 9 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 30 PB.9542.1 chr16 + 4256 28 full-splice_match PFAS rna51846 4314 28 33 25 multi-exon FALSE canonical 14 21 3073 59.6573549531 2 5 0 FALSE 0 0 NA A coding 1335 4005 107 4111 20 PB.10674.1 chr19 - 1841 13 full-splice_match TIMM44 rna57607 2093 13 248 4 multi-exon FALSE canonical 30 57 66 81.3941029805 5 0 0 FALSE 0 0 NA A coding 453 1359 19 1377 25 PB.9612.5 chr16 + 3700 3 novel_in_catalog MAP2K3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 45 491 2576 6.48074069841 7 4 0 FALSE 0 0 NA C coding 126 378 1226 1603 30 PB.6907.1 chr11 + 1884 3 full-splice_match SLC48A1 rna37612 1744 3 53 -193 multi-exon FALSE canonical 30 113 200 148.499158247 14 6 0 FALSE 0 0 NA A coding 146 438 65 502 10 PB.3582.1 chr5 - 2867 1 genic_intron novelGene_1652 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 5 NA FALSE 0 0 NA A coding 126 378 733 1110 90 PB.870.1 chr1 - 554 4 full-splice_match H3F3A rna4748 1088 4 35 499 multi-exon FALSE canonical 48 14353 91 3704.17278215 16 1 0 FALSE 0 0 NA A coding 136 408 115 522 85 PB.2384.1 chr3 - 2630 1 incomplete-splice_match SAMD9 rna12861 6800 2 3216 955 mono-exon FALSE canonical NA NA NA NA 24 5 NA FALSE 0 0 NA C coding 578 1734 4 1737 65 PB.3406.5 chr5 + 5875 1 genic_intron novelGene_819 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A coding 167 501 694 1194 85 PB.2932.3 chr4 - 1653 4 novel_not_in_catalog CCND3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 14 72 222 296.160429497 17 0 0 FALSE 0 0 NA C coding 96 288 397 684 35 PB.2932.2 chr4 - 1997 5 full-splice_match CCND3 rna15998 2007 5 -12 22 multi-exon FALSE canonical 42 331 350 180.20543832 91 0 0 FALSE 0 0 NA C coding 292 876 153 1028 35 PB.2932.1 chr4 - 1807 5 novel_not_in_catalog CCND3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 5 57 158 266.210443071 11 3 0 FALSE 0 0 NA C coding 211 633 204 836 35 PB.784.1 chr1 - 1603 6 full-splice_match GLMP rna4302 1617 6 6 8 multi-exon FALSE canonical 44 277 154 156.668439706 72 0 0 FALSE 0 0 NA C coding 406 1218 35 1252 20 PB.8269.3 chr14 - 1476 5 novel_not_in_catalog MOB2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 238 553.635258993 2 5 0 TRUE 0 0 NA C coding 123 369 391 759 10 PB.8269.1 chr14 - 1483 5 full-splice_match MOB2 rna44744 1530 5 39 8 multi-exon FALSE canonical 37 237 75 433.695745886 38 0 0 FALSE 0 0 NA C coding 237 711 59 769 15 PB.4098.1 chr6 + 1535 2 full-splice_match TNFAIP8 rna22218 2013 2 94 384 multi-exon FALSE canonical 27 271 113 NA 8 2 0 FALSE 0 0 NA C coding 188 564 113 676 55 PB.4098.2 chr6 + 6081 1 genic_intron novelGene_2015 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.2932.8 chr4 - 2636 1 genic_intron novelGene_916 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 7 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.5825.4 chr9 + 2049 12 novel_in_catalog ANXA7 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 1875 263 1096.0606735 2 1 0 FALSE 0 0 NA B coding 318 954 449 1402 40 PB.9476.1 chr16 - 2834 1 incomplete-splice_match ANKFY1 rna51473 6836 26 3920 83 mono-exon FALSE canonical NA NA NA NA 5 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 45 PB.4098.7 chr6 + 1751 2 full-splice_match TNFAIP8 rna22220 1171 2 56 -636 multi-exon FALSE canonical 41 556 101 NA 23 3 0 FALSE 0 0 NA C coding 198 594 71 664 15 PB.7692.8 chr12 + 1448 1 genic_intron novelGene_1815 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.196.1 chr1 + 3926 14 full-splice_match CEP85 rna986 3926 14 -3 3 multi-exon FALSE canonical 33 402 2257 142.691975948 8 0 0 FALSE 0 0 NA A coding 762 2286 130 2415 25 PB.11852.2 chrX - 2881 1 intergenic novelGene_979 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 17 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 15 PB.2919.2 chr4 - 1554 6 full-splice_match OARD1 rna15933 1515 6 430 -469 multi-exon FALSE canonical 45 513 43 333.751404491 2 1 0 FALSE 0 0 NA C coding 152 456 85 540 80 PB.6039.1 chr9 + 1679 1 novel_in_catalog MXI1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.4538.1 chr7 - 3185 29 full-splice_match NEDD4 rna24568 5842 29 150 2507 multi-exon FALSE canonical 34 241 2468 88.4703340109 15 1 0 FALSE 0 0 NA C coding 900 2700 39 2738 65 PB.2919.1 chr4 - 1603 6 full-splice_match OARD1 rna15934 1600 6 467 -470 multi-exon FALSE canonical 39 509 91 335.113413638 9 0 0 FALSE 0 0 NA C coding 152 456 133 588 85 PB.2260.1 chr3 + 3496 1 intergenic novelGene_1440 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.1496.3 chr2 + 4763 10 full-splice_match DCP1A rna8089 6009 10 124 1122 multi-exon FALSE canonical 38 205 1402 136.011028965 15 0 0 FALSE 0 0 NA C coding 582 1746 20 1765 75 PB.7084.3 chr11 + 1913 1 intergenic novelGene_1288 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 14 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.563.2 chr1 + 3577 1 genic_intron novelGene_1839 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 15 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.1496.2 chr2 + 2948 1 novel_in_catalog DCP1A novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 17 5 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.7060.9 chr11 + 2726 1 novel_in_catalog USP15 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 70 PB.8179.1 chr13 + 5933 1 genic_intron novelGene_1736 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.7060.4 chr11 + 1862 4 novel_in_catalog USP15 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 3035 115 220.852892216 3 0 0 FALSE 0 0 NA C coding 174 522 27 548 70 PB.7060.5 chr11 + 3182 23 novel_not_in_catalog USP15 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 690 1044.50945424 6 2 0 TRUE 0 0 NA C coding 682 2046 852 2897 25 PB.7060.7 chr11 + 3057 1 full-splice_match LOC107000909 gene18845 1084 1 -1940 -33 mono-exon FALSE canonical NA NA NA NA 12 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.2563.1 chr3 + 2615 10 novel_in_catalog EXOC4 novel NA NA NA NA combination_of_known_junctions TRUE canonical 47 1272 1025 300.199933378 5 0 0 FALSE 0 0 NA B coding 505 1515 19 1533 85 PB.7060.1 chr11 + 3220 22 full-splice_match USP15 rna38437 4783 22 70 1493 multi-exon FALSE canonical 48 1234 689 634.086744854 53 2 0 FALSE 0 0 NA C coding 981 2943 7 2949 20 PB.7060.2 chr11 + 3161 21 full-splice_match USP15 rna38439 4454 21 -20 1313 multi-exon FALSE canonical 48 813 704 688.352380689 27 0 0 FALSE 0 0 NA C coding 952 2856 22 2877 25 PB.7060.3 chr11 + 3245 3 novel_in_catalog USP15 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 3035 100 261 17 1 0 FALSE 0 0 NA C coding 122 366 12 377 65 PB.10402.2 chr18 - 3462 22 incomplete-splice_match ROCK1 rna56185 6382 33 -100 3020 internal_fragment FALSE canonical 46 796 976 236.353548736 77 2 0 FALSE 0 0 NA B coding 859 2577 884 3460 65 PB.10402.1 chr18 - 1396 11 incomplete-splice_match ROCK1 rna56186 6304 33 2456 2452 internal_fragment FALSE canonical 46 757 970 196.135157481 2 0 0 FALSE 0 0 NA B coding 456 1368 27 1394 70 PB.9790.3 chr16 + 750 3 full-splice_match LOC100426632 rna53046 1840 3 1086 4 multi-exon FALSE canonical 36 379 364 59.4978991226 2 1 0 FALSE 0 0 NA C non_coding NA NA NA NA 10 PB.4518.1 chr7 + 6711 21 full-splice_match AP4E1 rna24478 6744 21 29 4 multi-exon FALSE canonical 42 263 3155 91.2688336728 3 9 0 FALSE 0 0 NA C coding 1137 3411 61 3471 15 PB.10402.5 chr18 - 2702 17 incomplete-splice_match ROCK1 rna56185 6382 33 15 3665 internal_fragment FALSE canonical 46 796 861 233.905964011 19 0 0 FALSE 0 0 NA B coding 644 1932 769 2700 55 PB.10402.4 chr18 - 2971 18 incomplete-splice_match ROCK1 rna56185 6382 33 -47 3458 internal_fragment FALSE canonical 46 796 923 241.232253233 13 0 0 FALSE 0 0 NA B coding 713 2139 831 2969 20 PB.1007.2 chr1 + 3082 2 full-splice_match ZNF281 rna5539 4907 2 34 1791 multi-exon FALSE canonical 17 22 86 NA 79 1 1 FALSE 0 0 NA C coding 896 2688 105 2792 85 PB.6414.1 chr10 - 2902 1 genic_intron novelGene_1086 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 20 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5982.4 chr9 - 3659 1 genic_intron novelGene_1761 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 2 NA FALSE 0 0 NA A coding 402 1206 149 1354 90 PB.5982.3 chr9 - 4366 14 novel_not_in_catalog DNMBP novel NA NA NA NA any annotated donor/acceptor FALSE canonical 9 67 1296 81.6333265278 5 1 0 FALSE 0 0 NA C coding 1208 3624 144 3767 15 PB.7121.1 chr11 - 3582 2 full-splice_match BBS10 rna38632 2246 2 21 -1357 multi-exon FALSE canonical 41 155 254 NA 2 2 0 FALSE 0 0 NA A coding 720 2160 58 2217 25 PB.5982.1 chr9 - 5471 17 full-splice_match DNMBP rna32592 6414 17 45 898 multi-exon FALSE canonical 28 112 69 70.2851335632 10 2 0 FALSE 0 0 NA C coding 1577 4731 80 4810 20 PB.11617.1 chr20 + 2964 5 full-splice_match CYB5B rna62665 1150 5 138 -1952 multi-exon FALSE canonical 47 1229 383 320.284248754 37 15 0 FALSE 0 0 NA A coding 150 450 22 471 45 PB.6466.1 chr10 + 3208 17 full-splice_match MED15 rna35203 3298 17 82 8 multi-exon FALSE canonical 10 14 1338 78.7718223732 34 1 0 FALSE 0 0 NA C coding 748 2244 50 2293 10 PB.9938.1 chr16 + 1444 5 full-splice_match TACO1 rna53917 1475 5 29 2 multi-exon FALSE canonical 47 806 576 115.654658358 15 2 0 FALSE 0 0 NA A coding 297 891 190 1080 10 PB.6466.3 chr10 + 2899 17 novel_not_in_catalog MED15 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 597 80.4735981549 2 4 0 TRUE 0 0 NA C coding 396 1188 791 1978 15 PB.6466.2 chr10 + 2690 3 novel_in_catalog MED15 novel NA NA NA NA combination_of_known_junctions FALSE canonical 38 254 170 8.48528137424 5 0 0 FALSE 0 0 NA C coding 71 213 103 315 85 PB.6466.5 chr10 + 3492 1 novel_in_catalog MED15 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 5 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.9512.1 chr16 - 902 4 full-splice_match GABARAP rna51691 833 4 -72 3 multi-exon FALSE canonical 48 4097 212 1694.88583686 39 1 0 FALSE 0 0 NA A coding 117 351 123 473 30 PB.8781.14 chr14 - 6043 1 novel_in_catalog CCDC82 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 7 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.6466.6 chr10 + 3148 17 novel_in_catalog MED15 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 2 3 319 85.2408352845 2 6 0 FALSE 0 0 NA C coding 717 2151 82 2232 10 PB.6466.9 chr10 + 6030 1 genic_intron novelGene_1258 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 12 NA FALSE 0 0 NA A coding 113 339 5353 5691 75 PB.604.4 chr1 + 3829 6 novel_in_catalog CD53 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 1862 2873 475.468190314 2 2 0 FALSE 0 0 NA C coding 112 336 121 456 40 PB.8563.1 chr14 + 2809 21 full-splice_match CSTF3 rna46362 2815 21 -1 7 multi-exon FALSE canonical 42 327 385 177.907279222 30 0 0 FALSE 0 0 NA A coding 717 2151 161 2311 30 PB.12014.1 chrX + 2906 7 full-splice_match PLP1 rna64670 2899 7 5 -12 multi-exon FALSE canonical 15 555 507 1162.90885283 9 0 0 FALSE 0 0 NA A coding 242 726 160 885 25 PB.7549.2 chr12 + 2788 1 genic_intron novelGene_1197 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 13 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.6628.1 chr10 + 3401 17 full-splice_match L3MBTL2 rna36109 3498 17 94 3 multi-exon FALSE canonical 38 169 1882 116.464586892 21 0 0 FALSE 0 0 NA C coding 705 2115 61 2175 10 PB.9300.1 chr15 + 2571 4 full-splice_match MOB3B rna50473 5776 4 24 3181 multi-exon FALSE canonical 32 221 271 75.3259583411 2 3 0 FALSE 0 0 NA C coding 216 648 470 1117 35 PB.7549.1 chr12 + 1622 11 full-splice_match HAT1 rna40740 1684 11 55 7 multi-exon FALSE canonical 40 498 47 276.367508944 37 0 0 FALSE 0 0 NA A coding 419 1257 41 1297 30 PB.5214.1 chr8 + 1446 6 full-splice_match PDGFRL rna28348 1576 6 101 29 multi-exon FALSE canonical 15 40 524 10.9087121146 4 0 0 FALSE 0 0 NA A coding 375 1125 20 1144 45 PB.1852.4 chr2 - 2707 23 full-splice_match ARMC8 rna9900 2520 23 -7 -180 multi-exon FALSE canonical 44 350 70 338.001479287 13 2 0 FALSE 0 0 NA C coding 659 1977 144 2120 35 PB.8422.2 chr14 + 1935 12 novel_not_in_catalog STX5 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 126 256.836523882 2 2 0 FALSE 0 0 NA C coding 355 1065 295 1359 25 PB.8422.1 chr14 + 1781 11 full-splice_match STX5 rna45515 1667 11 12 -126 multi-exon FALSE canonical 31 80 121 219.533596518 40 0 0 FALSE 0 0 NA C coding 355 1065 141 1205 25 PB.7769.1 chr12 - 1988 2 full-splice_match LOC714902 rna42078 2797 2 21 788 multi-exon FALSE canonical 27 99 65 NA 4 0 0 FALSE 0 0 NA A coding 377 1131 221 1351 85 PB.2163.1 chr3 - 1802 5 full-splice_match RHBDD2 rna11583 1868 5 59 7 multi-exon FALSE canonical 18 34 198 54.8999089252 2 3 1 FALSE 0 0 NA C coding 213 639 596 1234 10 PB.6628.2 chr10 + 1913 15 incomplete-splice_match L3MBTL2 rna36109 3498 17 97 1488 3prime_fragment FALSE canonical 38 169 1879 109.421204526 2 0 0 FALSE 0 0 NA C coding 618 1854 58 1911 70 PB.943.8 chr1 + 2980 12 novel_not_in_catalog PIGR novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2696 208.01922988 6 1 0 TRUE 0 0 NA C coding 764 2292 166 2457 30 PB.943.9 chr1 + 3035 10 novel_not_in_catalog PIGR novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 264 218.100894083 2 8 0 TRUE 0 0 NA C coding 361 1083 184 1266 30 PB.943.4 chr1 + 3115 12 novel_not_in_catalog PIGR novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 2851 208.01922988 4 1 1 TRUE 0 0 NA C coding 764 2292 185 2476 30 PB.1676.1 chr2 + 3956 13 full-splice_match ETV5 rna8992 4077 13 111 10 multi-exon FALSE canonical 17 83 62 98.4428768373 9 7 0 FALSE 0 0 NA A coding 510 1530 137 1666 30 PB.943.6 chr1 + 3038 12 novel_not_in_catalog PIGR novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 3014 208.01922988 2 2 0 TRUE 0 0 NA C coding 764 2292 185 2476 45 PB.943.7 chr1 + 3018 12 novel_not_in_catalog PIGR novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 2734 208.01922988 2 1 0 TRUE 0 0 NA C coding 764 2292 184 2475 30 PB.943.1 chr1 + 4151 11 full-splice_match PIGR rna5161 4257 11 98 8 multi-exon FALSE canonical 9 304 1135 138.49909747 1129 5 0 FALSE 0 0 NA C coding 764 2292 91 2382 30 PB.943.2 chr1 + 1689 1 novel_in_catalog PIGR novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 60 PB.2106.1 chr3 + 5695 5 full-splice_match C3H21orf91 rna11294 1328 5 24 -4391 multi-exon FALSE canonical 34 376 54 157.422997049 3 2 0 FALSE 0 0 NA A coding 297 891 62 952 20 PB.9906.6 chr16 - 3654 16 novel_not_in_catalog ARHGAP27 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 912 60.8604962188 3 5 0 TRUE 0 0 NA B coding 309 927 103 1029 25 PB.852.1 chr1 + 1870 9 novel_in_catalog UAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 31 101 162 596.906190285 2 1 0 FALSE 0 0 NA A coding 443 1329 69 1397 15 PB.9906.4 chr16 - 3619 17 novel_not_in_catalog ARHGAP27 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 2 67 57.1576766498 5 5 0 FALSE 0 0 NA B coding 549 1647 425 2071 25 PB.9906.3 chr16 - 3659 16 novel_not_in_catalog ARHGAP27 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 13 24 174 59.6322060635 41 2 0 FALSE 0 0 NA B coding 665 1995 118 2112 25 PB.9906.2 chr16 - 3764 17 novel_not_in_catalog ARHGAP27 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 13 24 214 55.4797260267 31 3 0 FALSE 0 0 NA B coding 687 2061 158 2218 25 PB.6492.2 chr10 + 1090 5 full-splice_match GSTT2 rna35374 1110 5 12 8 multi-exon FALSE canonical 41 175 591 147.102005425 2 0 0 FALSE 0 0 NA C coding 244 732 67 798 30 PB.6492.3 chr10 + 1437 4 novel_in_catalog GSTT2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 319 417 96.9123315167 2 0 0 FALSE 0 0 NA C coding 176 528 67 594 30 PB.1967.1 chr2 - 1990 14 novel_not_in_catalog LSG1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 3 3 1479 226.201237839 43 0 0 TRUE 0 0 NA B coding 642 1926 65 1990 80 PB.573.1 chr1 - 3456 10 full-splice_match SLC25A24 rna3135 3175 10 7 -288 multi-exon FALSE canonical 45 453 1296 95.1262319237 62 1 0 FALSE 0 0 NA C coding 477 1431 199 1629 30 PB.7452.1 chr12 - 1687 2 full-splice_match CXCR4 rna40256 1087 2 -61 -539 multi-exon FALSE canonical 43 1973 104 NA 15 0 0 FALSE 0 0 NA A coding 352 1056 90 1145 15 PB.573.3 chr1 - 3392 10 novel_not_in_catalog SLC25A24 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1381 202.746146696 4 10 0 FALSE 0 0 NA C coding 416 1248 140 1387 30 PB.9906.8 chr16 - 2849 1 genic_intron novelGene_1040 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A coding 152 456 924 1379 80 PB.1492.5 chr2 + 3577 10 full-splice_match ARHGEF3 rna8025 3594 10 13 4 multi-exon FALSE canonical 31 106 247 132.924790765 114 0 0 FALSE 0 0 NA C coding 526 1578 152 1729 20 PB.11508.6 chr20 + 1610 1 genic ADCY7 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 65 PB.11508.5 chr20 + 5599 25 novel_in_catalog ADCY7 novel NA NA NA NA combination_of_known_junctions FALSE canonical 27 92 2100 167.526117367 8 0 0 FALSE 0 0 NA C coding 1078 3234 251 3484 35 PB.11508.4 chr20 + 4140 26 novel_not_in_catalog ADCY7 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 73 178.025279104 2 5 0 TRUE 0 0 NA C coding 1078 3234 317 3550 5 PB.11508.3 chr20 + 6122 26 full-splice_match ADCY7 rna62135 6660 26 532 6 multi-exon FALSE canonical 27 92 2150 166.676333053 6 4 0 FALSE 0 0 NA C coding 1078 3234 301 3534 35 PB.11508.2 chr20 + 6707 26 full-splice_match ADCY7 rna62134 6221 26 54 -540 multi-exon FALSE canonical 27 92 2189 168.697954937 34 3 0 FALSE 0 0 NA C coding 1078 3234 340 3573 65 PB.11508.1 chr20 + 5602 25 novel_in_catalog ADCY7 novel NA NA NA NA combination_of_known_junctions FALSE canonical 27 92 2103 167.526117367 2 2 0 FALSE 0 0 NA C coding 1078 3234 254 3487 35 PB.1492.2 chr2 + 3474 11 full-splice_match ARHGEF3 rna8024 3555 11 76 5 multi-exon FALSE canonical 30 89 145 159.226254117 2 1 0 FALSE 0 0 NA C coding 532 1596 32 1627 20 PB.5371.7 chr8 - 2783 13 novel_not_in_catalog ASPH novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 289 982.422516029 4 22 0 TRUE 0 0 NA C coding 240 720 365 1084 55 PB.1712.5 chr2 - 1619 3 novel_in_catalog TTC14 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 770 260 670.499813572 2 1 0 FALSE 0 0 NA C coding 175 525 100 624 80 PB.1492.9 chr2 + 2863 1 novel_in_catalog ARHGEF3 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.632.1 chr1 + 2543 1 incomplete-splice_match HIPK1 rna3424 8057 16 5509 6 mono-exon FALSE canonical NA NA NA NA 7 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 10 PB.3807.5 chr6 - 6112 23 novel_in_catalog SLC12A7 novel NA NA NA NA combination_of_known_junctions FALSE canonical 9 19 1825 151.485972948 2 12 0 FALSE 0 0 NA B coding 1037 3111 183 3293 30 PB.393.1 chr1 + 2985 1 antisense novelGene_EPS15_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11877.1 chrX - 1504 4 novel_not_in_catalog OTUD5 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 98 204.501833733 8 0 0 FALSE 0 0 NA B non_coding NA NA NA NA 10 PB.6414.2 chr10 - 2723 1 genic_intron novelGene_1090 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 19 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5172.261 chr7 + 1873 9 fusion LOC711872_LOC721083 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 260 3339.19720891 2 8 0 TRUE 0 0 NA B coding 375 1125 654 1778 70 PB.8044.1 chr13 - 3147 2 genic_intron novelGene_1296 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 2925 NA 9 4 0 FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.1150.1 chr1 - 1433 7 full-splice_match C1H1orf131 rna6269 1453 7 16 4 multi-exon FALSE canonical 45 396 486 161.657044387 5 0 0 FALSE 0 0 NA A coding 297 891 25 915 15 PB.4136.1 chr6 - 3672 1 incomplete-splice_match AFF4 rna22426 9456 20 5771 14 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA B non_coding NA NA NA NA 45 PB.4313.13 chr6 + 3321 26 fusion DOCK2_LOC106999030 novel NA NA NA NA no_subcategory FALSE canonical 0 0 2464 281.593678906 2 12 0 TRUE 0 0 NA B coding 923 2769 32 2800 20 PB.1232.2 chr2 - 1704 5 novel_in_catalog MINA novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 135 48 164.12799883 7 1 0 FALSE 0 0 NA C coding 262 786 88 873 90 PB.4313.16 chr6 + 2708 2 genic_intron novelGene_2519 novel NA NA NA NA no_subcategory TRUE canonical 10 74 438 NA 3 7 1 FALSE 0 0 NA B coding 100 300 563 862 65 PB.4313.17 chr6 + 5843 1 antisense novelGene_FAM196B_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.4313.15 chr6 + 2521 1 genic_intron novelGene_2519 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 8 7 NA FALSE 0 0 NA B coding 100 300 1919 2218 60 PB.4313.18 chr6 + 5711 1 genic_intron novelGene_2520 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 16 1 NA FALSE 0 0 NA A coding 113 339 4397 4735 85 PB.3623.1 chr5 - 1612 16 incomplete-splice_match CENPE rna19571 8250 47 30 6608 internal_fragment FALSE canonical 23 214 116 58.4208866759 4 0 0 FALSE 0 0 NA A coding 517 1551 61 1611 65 PB.5025.3 chr7 - 1975 14 full-splice_match ENTPD5 rna27136 5391 14 109 3307 multi-exon FALSE canonical 15 560 187 187.026736057 8 2 0 FALSE 0 0 NA C coding 428 1284 258 1541 70 PB.650.3 chr1 + 2616 1 incomplete-splice_match FAM46C rna3500 5731 3 3112 4 mono-exon FALSE canonical NA NA NA NA 13 4 NA FALSE 0 0 NA C non_coding NA NA NA NA 10 PB.650.2 chr1 + 1632 1 novel_in_catalog FAM46C novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 9 6 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.650.1 chr1 + 1985 2 full-splice_match FAM46C rna3499 5122 2 16 3121 multi-exon FALSE canonical 42 1086 105 NA 91 1 0 FALSE 0 0 NA C coding 391 1173 133 1305 70 PB.10701.8 chr19 - 4253 26 novel_not_in_catalog TYK2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 348 158.874164042 2 7 0 TRUE 0 0 NA B coding 1187 3561 393 3953 10 PB.9127.1 chr15 + 2941 8 full-splice_match RAB14 rna49558 3197 8 250 6 multi-exon FALSE canonical 30 141 201 529.694251432 206 0 0 FALSE 0 0 NA A coding 215 645 209 853 30 PB.10701.2 chr19 - 4048 26 novel_not_in_catalog TYK2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 128 162.040118489 5 5 0 TRUE 0 0 NA B coding 1190 3570 173 3742 15 PB.3208.3 chr4 + 5169 29 full-splice_match MED23 rna17383 4656 29 6 -519 multi-exon FALSE canonical 47 642 231 227.989034824 7 0 0 FALSE 0 0 NA C coding 1368 4104 161 4264 40 PB.10701.4 chr19 - 4131 26 novel_not_in_catalog TYK2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 226 157.508729917 24 3 0 TRUE 0 0 NA B coding 1187 3561 271 3831 10 PB.4806.8 chr7 + 1390 7 fusion LOC710951_LOC710093 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 394 570.818710275 2 2 0 TRUE 0 0 NA B coding 110 330 510 839 15 PB.2411.1 chr3 - 1724 13 full-splice_match CYP3A5 rna13053 1512 13 -100 -112 multi-exon FALSE canonical 19 580 965 338.564617171 22 0 0 FALSE 0 0 NA A coding 503 1509 101 1609 20 PB.6120.1 chr9 + 3300 5 full-splice_match PRAP1 rna33403 819 5 60 -2541 multi-exon FALSE canonical 6 29 305 34.756294394 2 8 0 FALSE 0 0 NA A coding 141 423 86 508 25 PB.4806.1 chr7 + 1330 6 fusion LOC710951_LOC708328 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 377 555.63927147 2 2 0 TRUE 0 0 NA A coding 110 330 450 779 15 PB.4806.3 chr7 + 1514 8 novel_not_in_catalog LOC710951 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 446 554.050539211 2 2 0 TRUE 0 0 NA A coding 156 468 61 528 20 PB.7000.1 chr11 - 4091 27 novel_not_in_catalog ITGA7 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 860 103.508453761 19 19 0 TRUE 0 0 NA A coding 828 2484 1130 3613 45 PB.5172.555 chr7 + 1950 9 fusion LOC711872_LOC714310 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 422 3314.01282436 2 10 0 TRUE 0 0 NA B coding 375 1125 697 1821 25 PB.4806.4 chr7 + 1416 10 fusion LOC710951_LOC710093 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 32 535.989738708 2 32 0 TRUE 0 0 NA B coding 110 330 544 873 30 PB.9696.1 chr16 - 3246 6 novel_not_in_catalog SLFN12L novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2579 97.1596624119 2 8 0 TRUE 0 0 NA A coding 688 2064 502 2565 25 PB.4806.6 chr7 + 1422 7 fusion LOC106999335_LOC710951 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 398 553.019891143 2 8 0 TRUE 0 0 NA B coding 110 330 548 877 30 PB.665.1 chr1 - 2881 2 genic_intron novelGene_2083 novel NA NA NA NA no_subcategory FALSE canonical 33 208 236 NA 89 3 0 FALSE 0 0 NA B coding 242 726 647 1372 10 PB.11520.1 chr20 - 3321 1 genic_intron novelGene_823 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 11 24 NA FALSE 0 0 NA B non_coding NA NA NA NA 80 PB.8081.1 chr13 - 2976 1 incomplete-splice_match TGFA rna43750 4317 6 1333 9 mono-exon FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A coding 114 342 2038 2379 30 PB.9437.2 chr16 - 5165 22 full-splice_match ABR rna51335 5203 22 22 16 multi-exon FALSE canonical 32 324 148 226.283008642 10 6 0 FALSE 0 0 NA C coding 822 2466 14 2479 35 PB.5288.4 chr8 + 1619 1 intergenic novelGene_826 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 10 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.9437.1 chr16 - 3711 8 full-splice_match ABR rna51338 3732 8 19 2 multi-exon FALSE canonical 16 31 225 235.261556571 2 4 0 FALSE 0 0 NA C coding 310 930 82 1011 10 PB.9437.6 chr16 - 5466 4 novel_in_catalog ABR novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 374 53 57.5325994546 2 3 0 FALSE 0 0 NA C coding 74 222 74 295 30 PB.9437.5 chr16 - 5245 22 novel_not_in_catalog ABR novel NA NA NA NA any annotated donor/acceptor FALSE canonical 8 8 223 258.669673522 2 8 0 FALSE 0 0 NA C coding 769 2307 248 2554 30 PB.8443.1 chr14 + 3472 2 genic_intron novelGene_276 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 2110 NA 2 7 0 FALSE 0 0 NA A coding 107 321 1992 2312 70 PB.2570.2 chr3 + 1481 5 incomplete-splice_match CALD1 rna13830 5190 15 219 3490 3prime_fragment FALSE canonical 34 1161 456 419.970237041 2 2 0 FALSE 0 0 NA C coding 414 1242 239 1480 60 PB.742.1 chr1 - 984 5 full-splice_match JTB rna4041 1646 5 657 5 multi-exon FALSE canonical 48 1205 462 667.746958061 7 0 0 FALSE 0 0 NA A coding 146 438 380 817 10 PB.658.3 chr1 - 5750 8 incomplete-splice_match NOTCH2 rna3545 10826 34 5067 9 5prime_fragment TRUE canonical 40 506 331 180.496537363 5 4 0 FALSE 0 0 NA B coding 773 2319 213 2531 20 PB.658.1 chr1 - 2787 1 incomplete-splice_match NOTCH2 rna3545 10826 34 7621 419 mono-exon FALSE canonical NA NA NA NA 10 5 NA FALSE 0 0 NA B non_coding NA NA NA NA 20 PB.3404.1 chr5 + 1568 2 novel_in_catalog TBC1D1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 112 267 NA 2 0 0 FALSE 0 0 NA B coding 155 465 361 825 90 PB.658.4 chr1 - 7048 13 incomplete-splice_match NOTCH2 rna3545 10826 34 3749 29 5prime_fragment FALSE canonical 37 506 1649 192.153584406 4 4 0 FALSE 0 0 NA B coding 1161 3483 367 3849 55 PB.11933.1 chrX + 3985 8 novel_not_in_catalog NLGN3 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 862 26.0768096208 2 11 0 TRUE 0 0 NA A coding 646 1938 954 2891 15 PB.5000.1 chr7 - 3079 21 full-splice_match ACTN1 rna26957 3701 21 64 558 multi-exon FALSE canonical 19 113 2521 265.710368635 139 1 0 FALSE 0 0 NA C coding 887 2661 242 2902 80 PB.9992.1 chr16 + 2955 1 genic_intron novelGene_1317 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 15 NA FALSE 0 0 NA A coding 138 414 2395 2808 95 PB.11130.2 chr19 + 2560 2 novel_not_in_catalog FPR3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 5 5 61 NA 5 1 0 FALSE 0 0 NA B coding 353 1059 72 1130 30 PB.9797.1 chr16 + 1487 3 full-splice_match DUSP14 rna53085 1433 3 -39 -15 multi-exon FALSE canonical 20 78 90 125 2 1 0 FALSE 0 0 NA A coding 198 594 273 866 35 PB.11130.1 chr19 + 2618 3 novel_not_in_catalog FPR3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 7 10 70 5 6 0 0 TRUE 0 0 NA B coding 353 1059 139 1197 30 PB.4522.2 chr7 + 4141 6 novel_not_in_catalog MAPK6 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 105 525.443622095 3 5 0 FALSE 0 0 NA C coding 721 2163 738 2900 35 PB.10588.1 chr19 - 2235 12 full-splice_match SGTA rna57265 1227 12 30 -1038 multi-exon FALSE canonical 29 81 591 116.301332752 5 8 0 FALSE 0 0 NA C coding 313 939 95 1033 5 PB.10588.2 chr19 - 1504 1 genic SGTA novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA C non_coding NA NA NA NA 0 PB.4522.1 chr7 + 4191 6 full-splice_match MAPK6 rna24506 4220 6 17 12 multi-exon FALSE canonical 40 525 148 358.590295463 23 0 0 FALSE 0 0 NA C coding 721 2163 781 2943 25 PB.10648.4 chr19 - 3561 20 novel_not_in_catalog KHSRP novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 205 464.89783824 3 10 2 TRUE 0 0 NA B coding 603 1809 389 2197 80 PB.10648.2 chr19 - 3830 20 novel_not_in_catalog KHSRP novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 167 464.89783824 4 10 0 TRUE 0 0 NA B coding 603 1809 351 2159 20 PB.7777.1 chr12 - 3955 2 antisense novelGene_COPS8_AS novel NA NA NA NA no_subcategory FALSE canonical 40 105 362 NA 3 14 0 FALSE 0 0 NA A coding 103 309 2214 2522 75 PB.11356.1 chr20 + 4252 31 full-splice_match LOC714226 rna61587 4352 31 93 7 multi-exon FALSE canonical 35 1035 1606 440.205633767 14 1 0 FALSE 0 0 NA A coding 1222 3666 70 3735 25 PB.6567.1 chr10 - 3129 9 full-splice_match FOXRED2 rna35861 3271 9 18 124 multi-exon FALSE canonical 0 0 129 25.436194684 2 2 0 FALSE 0 0 NA A coding 684 2052 131 2182 15 PB.8743.1 chr14 - 1473 5 full-splice_match RAB30 rna47429 9932 5 64 8395 multi-exon FALSE canonical 43 208 163 295.859764078 6 0 0 FALSE 0 0 NA C coding 201 603 178 780 85 PB.2361.1 chr3 - 2316 1 intergenic novelGene_1915 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 42 1 NA FALSE 0 0 NA A coding 379 1137 88 1224 95 PB.6436.3 chr10 - 4123 10 novel_not_in_catalog CECR1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 119 48.2078831728 3 1 0 FALSE 0 0 NA C coding 509 1527 166 1692 20 PB.12071.8 chrX - 5639 1 genic_intron novelGene_2133 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A coding 133 399 4606 5004 85 PB.198.1 chr1 + 458 2 full-splice_match CD52 rna1004 475 2 15 2 multi-exon FALSE canonical 48 17447 111 NA 8 2 0 FALSE 0 0 NA A non_coding NA NA NA NA 5 PB.2136.1 chr3 - 5571 25 full-splice_match CARD11 rna11460 4363 25 70 -1278 multi-exon FALSE canonical 12 25 2472 53.6190264738 6 2 0 FALSE 0 0 NA C coding 1154 3462 331 3792 85 PB.4765.2 chr7 + 2941 1 genic_intron novelGene_1468 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 20 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.4944.1 chr7 + 903 11 full-splice_match PSMA3 rna26688 922 11 29 -10 multi-exon FALSE canonical 41 613 45 250.405670862 5 1 0 FALSE 0 0 NA A coding 255 765 25 789 30 PB.6772.1 chr11 + 2513 8 full-splice_match NECAP1 rna36840 2516 8 -5 8 multi-exon FALSE canonical 43 1057 103 198.73348988 17 0 0 FALSE 0 0 NA C coding 275 825 9 833 20 PB.6772.3 chr11 + 2939 6 novel_in_catalog NECAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 1057 107 203.968134766 3 1 0 FALSE 0 0 NA C coding 192 576 13 588 15 PB.6772.2 chr11 + 2848 7 novel_in_catalog NECAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 1057 110 187.040102652 2 1 0 FALSE 0 0 NA C coding 260 780 16 795 35 PB.6772.4 chr11 + 2693 7 novel_not_in_catalog NECAP1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 972 528.225330707 2 9 0 FALSE 0 0 NA C coding 192 576 9 584 15 PB.11693.1 chr20 - 2809 15 full-splice_match TAF1C rna62958 2949 15 48 92 multi-exon FALSE canonical 4 5 1677 44.1474801093 6 8 0 FALSE 0 0 NA A coding 843 2529 195 2723 30 PB.4679.1 chr7 + 3799 10 full-splice_match HMG20A rna25268 1330 10 99 -2568 multi-exon FALSE canonical 41 366 798 135.535973085 35 0 0 FALSE 0 0 NA C coding 347 1041 108 1148 25 PB.5172.153 chr7 + 1539 8 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 348 3335.83752602 2 9 0 TRUE 0 0 NA B coding 196 588 817 1404 15 PB.4679.3 chr7 + 2911 2 novel_in_catalog HMG20A novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 562 95 NA 2 2 0 FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.4679.2 chr7 + 3705 10 novel_not_in_catalog HMG20A novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 698 294.599728445 2 18 0 TRUE 0 0 NA C coding 210 630 122 751 25 PB.5172.156 chr7 + 1556 8 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 319 3335.83752602 2 8 0 TRUE 0 0 NA B coding 196 588 833 1420 15 PB.795.5 chr1 - 3050 3 novel_in_catalog ETV3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 325 64 19.4935886896 7 0 0 FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.7032.1 chr11 + 2476 7 full-splice_match NAB2 rna38290 2351 7 -118 -7 multi-exon FALSE canonical 9 12 235 227.420315715 7 1 0 FALSE 0 0 NA A coding 525 1575 153 1727 25 PB.5172.155 chr7 + 1568 8 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 331 3335.83752602 16 5 0 TRUE 0 0 NA B coding 196 588 848 1435 15 PB.5172.484 chr7 + 1545 7 fusion LOC720839_LOC721089 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 340 2837.78575654 2 12 0 TRUE 0 0 NA B coding 476 1428 72 1499 25 PB.9856.1 chr16 + 3089 8 novel_in_catalog COASY novel NA NA NA NA combination_of_known_junctions FALSE canonical 36 211 2723 72.228803119 5 1 0 FALSE 0 0 NA C coding 269 807 1977 2783 15 PB.5172.486 chr7 + 1563 10 novel_not_in_catalog LOC721108 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 388 1862.68247428 2 5 0 TRUE 0 0 NA A coding 196 588 839 1426 15 PB.795.4 chr1 - 1820 4 novel_in_catalog ETV3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 290 358 30.2158898595 6 0 0 FALSE 0 0 NA C coding 151 453 75 527 80 PB.5172.480 chr7 + 1576 7 fusion LOC708891_LOC721089 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 408 3498.47295259 2 12 0 TRUE 0 0 NA B coding 196 588 854 1441 15 PB.5351.7 chr8 + 6671 2 novel_in_catalog LYN novel NA NA NA NA combination_of_known_junctions FALSE canonical 42 779 88 NA 2 4 0 FALSE 0 0 NA B coding 104 312 1679 1990 90 PB.5172.482 chr7 + 1941 11 fusion LOC711872_LOC721089 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 245 3148.29382364 2 5 0 TRUE 0 0 NA B coding 375 1125 694 1818 35 PB.4854.1 chr7 - 2063 5 full-splice_match EGLN3 rna26315 2700 5 6 631 multi-exon FALSE canonical 41 468 682 71.4142842854 2 4 0 FALSE 0 0 NA A coding 239 717 326 1042 10 PB.7383.2 chr11 - 2593 4 full-splice_match ZNF140 rna39923 2796 4 -59 262 multi-exon FALSE canonical 39 190 444 31.7490157328 6 4 0 FALSE 0 0 NA C coding 457 1371 436 1806 30 PB.11781.1 chrX - 3568 10 full-splice_match MID1 rna63290 6300 10 254 2478 multi-exon FALSE canonical 19 45 256 40.5955662604 2 0 0 FALSE 0 0 NA A coding 667 2001 313 2313 90 PB.7383.1 chr11 - 2757 6 novel_not_in_catalog ZNF140 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 28 70 767 73.8173421358 6 1 0 FALSE 0 0 NA C coding 354 1062 912 1973 30 PB.5172.488 chr7 + 1580 9 fusion LOC708891_LOC721108 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 216 3679.11320837 3 8 0 TRUE 0 0 NA B coding 196 588 858 1445 15 PB.5172.489 chr7 + 1605 8 fusion LOC708891_LOC721108 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 201 3590.74073138 5 7 0 TRUE 0 0 NA B coding 196 588 881 1468 15 PB.10616.1 chr19 - 2821 4 genic_intron novelGene_124 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 2783 0 2 5 0 FALSE 0 0 NA B coding 100 300 775 1074 10 PB.10223.2 chr17 - 1745 11 full-splice_match EPSTI1 rna55162 1538 11 78 -285 multi-exon FALSE canonical 42 440 950 323.030958269 17 2 0 FALSE 0 0 NA C coding 307 921 36 956 30 PB.10223.1 chr17 - 3358 12 novel_not_in_catalog EPSTI1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 705 460.619148538 2 15 1 TRUE 0 0 NA C coding 310 930 62 991 25 PB.795.1 chr1 - 2798 1 incomplete-splice_match ETV3 rna4399 5442 5 2638 7 mono-exon FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.1128.1 chr1 + 3071 1 antisense novelGene_PBX1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.9052.4 chr15 + 2089 8 novel_in_catalog ZER1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 33 152 287 198.912040862 4 2 0 FALSE 0 0 NA C coding 476 1428 382 1809 55 PB.9052.1 chr15 + 2826 1 novel_in_catalog ZER1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.1803.11 chr2 - 2740 7 novel_in_catalog CCNL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 574 356 598.95158402 2 1 0 FALSE 0 0 NA C coding 225 675 54 728 60 PB.9052.2 chr15 + 2993 16 full-splice_match ZER1 rna49183 4234 16 -29 1270 multi-exon FALSE canonical 33 152 347 174.585222742 2 0 0 FALSE 0 0 NA C coding 766 2298 442 2739 10 PB.9411.2 chr15 + 2995 1 incomplete-splice_match SPIN1 rna51152 4338 7 1335 9 mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 30 PB.7767.1 chr12 + 2359 5 novel_not_in_catalog UGT1A1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 896 2381.77328896 6 7 0 FALSE 0 0 NA C coding 539 1617 15 1631 15 PB.7767.2 chr12 + 1538 5 full-splice_match UGT1A1 rna42075 1602 5 790 -726 multi-exon FALSE canonical 6 447 74 2197.87806759 2 1 0 FALSE 0 0 NA C coding 262 786 24 809 20 PB.9411.1 chr15 + 4030 4 novel_in_catalog SPIN1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 25 43 389 685.33349546 3 10 0 FALSE 0 0 NA B non_coding NA NA NA NA 30 PB.7946.1 chr13 + 1376 7 full-splice_match QPCT rna43109 1905 7 308 221 multi-exon FALSE canonical 40 502 136 178.801565989 22 0 0 FALSE 0 0 NA A coding 361 1083 17 1099 50 PB.5704.1 chr9 + 4101 14 novel_in_catalog PLXDC2 novel NA NA NA NA combination_of_known_junctions TRUE canonical 31 614 1992 113.617780299 3 6 0 FALSE 0 0 NA A coding 529 1587 681 2267 75 PB.8748.1 chr14 - 3611 3 novel_in_catalog CCDC89 novel NA NA NA NA combination_of_known_junctions FALSE canonical 30 103 1669 248 2 6 0 FALSE 0 0 NA A coding 352 1056 255 1310 35 PB.9221.1 chr15 - 4026 17 full-splice_match NOL8 rna50027 4181 17 57 98 multi-exon FALSE canonical 41 140 164 112.31651704 6 0 0 FALSE 0 0 NA C coding 1166 3498 192 3689 25 PB.2108.1 chr3 - 1407 8 full-splice_match CXADR rna11298 1718 8 292 19 multi-exon FALSE canonical 14 66 1018 198.557296517 8 0 0 FALSE 0 0 NA C coding 352 1056 2 1057 55 PB.2108.2 chr3 - 2462 7 full-splice_match CXADR rna11299 5505 7 206 2837 multi-exon FALSE canonical 24 253 130 129.738197922 10 5 0 FALSE 0 0 NA C coding 365 1095 88 1182 80 PB.7264.1 chr11 - 2695 1 novel_in_catalog ATXN2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 12 NA FALSE 0 0 NA A coding 113 339 1350 1688 75 PB.9221.4 chr15 - 2949 12 incomplete-splice_match NOL8 rna50026 4056 17 57 1050 internal_fragment FALSE canonical 26 62 36 135.642913564 4 1 0 FALSE 0 0 NA C coding 962 2886 64 2949 65 PB.9076.1 chr15 + 2948 1 intergenic novelGene_245 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 12 NA FALSE 0 0 NA A coding 135 405 1229 1633 90 PB.8507.1 chr14 + 1345 5 full-splice_match SPI1 rna45977 1403 5 56 2 multi-exon FALSE canonical 20 102 660 75.019997334 38 1 0 FALSE 0 0 NA A coding 270 810 168 977 20 PB.6229.1 chr10 - 1619 4 full-splice_match SYS1 rna33974 2806 4 101 1086 multi-exon FALSE canonical 36 101 181 116.995726418 53 2 0 FALSE 0 0 NA C coding 156 468 185 652 15 PB.1509.2 chr2 - 1601 2 novel_not_in_catalog SMIM4 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 39 277 157 NA 3 0 0 FALSE 0 0 NA C non_coding NA NA NA NA 10 PB.2375.1 chr3 - 1698 10 full-splice_match LOC703490 rna12816 3198 10 56 1444 multi-exon FALSE canonical 36 798 305 451.376782744 43 0 0 FALSE 0 0 NA A coding 503 1509 132 1640 50 PB.10781.2 chr19 + 3295 8 novel_not_in_catalog TPM4 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 28 84 1315 1440.47978118 2 42 0 FALSE 0 0 NA C coding 152 456 99 554 30 PB.10781.1 chr19 + 1924 9 full-splice_match TPM4 rna58224 1504 9 45 -465 multi-exon FALSE canonical 20 246 327 1294.82122318 4 18 0 FALSE 0 0 NA C coding 284 852 88 939 60 PB.4166.1 chr6 - 3130 22 full-splice_match BRD8 rna22596 3306 22 123 53 multi-exon FALSE canonical 33 448 875 675.874988441 15 1 0 FALSE 0 0 NA C coding 951 2853 15 2867 85 PB.4166.6 chr6 - 2960 21 full-splice_match BRD8 rna22593 3087 21 121 6 multi-exon FALSE canonical 33 698 658 631.673174988 6 1 0 FALSE 0 0 NA C coding 878 2634 17 2650 70 PB.4166.7 chr6 - 2780 19 novel_in_catalog BRD8 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 0 0 878 772.397566024 3 1 0 FALSE 0 0 NA C coding 522 1566 905 2470 70 PB.4166.4 chr6 - 2876 20 full-splice_match BRD8 rna22594 3051 20 123 52 multi-exon FALSE canonical 30 110 1020 781.135071547 4 3 0 FALSE 0 0 NA C coding 866 2598 15 2612 90 PB.4166.5 chr6 - 3077 21 full-splice_match BRD8 rna22595 3261 21 129 55 multi-exon FALSE canonical 33 317 2759 714.771292093 7 0 0 FALSE 0 0 NA C coding 936 2808 9 2816 80 PB.9360.8 chr15 - 5936 37 incomplete-splice_match DOCK8 rna50853 7375 48 1430 9 5prime_fragment FALSE canonical 33 143 1212 190.551830219 2 1 0 FALSE 0 0 NA C coding 1572 4716 186 4901 25 PB.7709.6 chr12 + 2726 13 novel_not_in_catalog ANKZF1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 920 712.303306184 2 4 0 TRUE 0 0 NA B coding 516 1548 991 2538 25 PB.7709.7 chr12 + 2762 13 novel_not_in_catalog ANKZF1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 965 714.548108947 2 4 0 TRUE 0 0 NA B coding 726 2178 406 2583 30 PB.4382.10 chr6 - 2707 3 novel_not_in_catalog MGAT1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 46 31.496031496 44 4 0 TRUE 0 0 NA C coding 445 1335 281 1615 30 PB.4801.8 chr7 - 1406 11 incomplete-splice_match SUPT16H rna25942 4680 26 225 3049 internal_fragment FALSE canonical 48 1089 1154 299.262426643 2 1 0 FALSE 0 0 NA C coding 432 1296 109 1404 55 PB.7709.2 chr12 + 3299 13 novel_not_in_catalog ANKZF1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 662 730.575800311 4 3 0 TRUE 0 0 NA B coding 426 1278 103 1380 25 PB.7709.3 chr12 + 3061 12 novel_not_in_catalog ANKZF1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 658 777.791745906 2 1 0 TRUE 0 0 NA B coding 346 1038 1847 2884 30 PB.2595.2 chr3 + 1901 13 full-splice_match TBXAS1 rna13948 2029 13 105 23 multi-exon FALSE canonical 23 37 1492 63.7573525172 11 2 0 FALSE 0 0 NA C coding 533 1599 129 1727 20 PB.9897.1 chr16 - 1894 5 novel_not_in_catalog DCAKD novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 46 47.8121323515 2 6 0 TRUE 0 0 NA A coding 231 693 171 863 30 PB.4132.5 chr6 - 2051 11 novel_not_in_catalog IRF1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1064 290.750752364 3 10 0 TRUE 0 0 NA C coding 311 933 256 1188 15 PB.2595.6 chr3 + 3675 1 genic_intron novelGene_2503 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.2595.7 chr3 + 3539 1 genic_intron novelGene_2504 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A coding 101 303 3147 3449 90 PB.9600.3 chr16 + 611 1 full-splice_match LOC702723 rna52166 643 1 11 21 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A coding 184 552 36 587 80 PB.432.1 chr1 - 1899 9 full-splice_match OMA1 rna2312 4505 9 2602 4 multi-exon FALSE canonical 36 260 63 167.415650403 2 2 0 FALSE 0 0 NA A coding 524 1572 81 1652 10 PB.11217.1 chr19 - 3003 12 full-splice_match U2AF2 rna60815 3234 12 222 9 multi-exon FALSE canonical 44 358 1015 470.625116202 14 15 0 FALSE 0 0 NA A coding 471 1413 967 2379 15 PB.8664.1 chr14 + 563 3 full-splice_match HBB rna47054 471 3 16 -108 multi-exon FALSE canonical 48 816566 85 115832 10823 0 0 FALSE 0 0 NA C coding 92 276 159 434 30 PB.2595.9 chr3 + 3581 1 genic_intron novelGene_2505 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A coding 118 354 980 1333 65 PB.8664.7 chr14 + 587 3 novel_not_in_catalog HBB novel NA NA NA NA any annotated donor/acceptor FALSE canonical 14 2289 104 522970.5 56 0 0 FALSE 0 0 NA C coding 125 375 79 453 35 PB.4645.2 chr7 + 2548 7 full-splice_match ADPGK rna25084 1658 7 40 -930 multi-exon FALSE canonical 40 148 281 249.931990749 16 6 0 FALSE 0 0 NA C coding 496 1488 49 1536 20 PB.4645.3 chr7 + 2852 8 novel_not_in_catalog ADPGK novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 585 316.096504251 2 2 0 TRUE 0 0 NA C coding 374 1122 719 1840 20 PB.1651.3 chr2 + 1808 1 incomplete-splice_match CX3CR1 rna8871 3050 2 1218 25 mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 45 PB.9976.1 chr16 + 3110 17 novel_in_catalog NOL11 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical 0 0 2455 290.700877192 3 8 0 FALSE 0 0 NA C coding 591 1773 43 1815 35 PB.5513.6 chr8 - 2800 13 novel_in_catalog TAF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 487 1580 219.282922272 2 5 0 FALSE 0 0 NA C coding 424 1272 1528 2799 45 PB.1028.1 chr1 + 3230 16 novel_in_catalog TPR novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 1147 1439 363.140468689 2 11 1 FALSE 0 0 NA B coding 575 1725 249 1973 70 PB.2470.4 chr3 - 2538 1 genic_intron novelGene_2201 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.4490.1 chr7 + 1726 8 full-splice_match EIF3J rna24325 2163 8 -7 444 multi-exon FALSE canonical 20 38 61 490.954173014 6 0 0 FALSE 0 0 NA A coding 258 774 19 792 25 PB.11648.2 chr20 + 1636 2 genic_intron novelGene_1194 novel NA NA NA NA no_subcategory TRUE canonical 0 0 1394 NA 2 3 0 FALSE 0 0 NA B non_coding NA NA NA NA 40 PB.1048.9 chr1 - 1284 13 full-splice_match NPL rna5743 2650 13 13 1353 multi-exon FALSE canonical 19 36 131 189.98420987 2 0 0 FALSE 0 0 NA C coding 320 960 203 1162 40 PB.3722.1 chr5 + 2854 1 genic_intron novelGene_2350 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.3881.2 chr6 + 2738 1 incomplete-splice_match C6H5orf51 rna21214 5250 6 2510 3 mono-exon FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA C non_coding NA NA NA NA 10 PB.3881.1 chr6 + 5229 6 full-splice_match C6H5orf51 rna21214 5250 6 20 1 multi-exon FALSE canonical 46 532 122 71.3512438574 3 9 0 FALSE 0 0 NA C coding 294 882 23 904 10 PB.5022.3 chr7 - 6233 13 full-splice_match ELMSAN1 rna27117 10678 13 2839 1606 multi-exon FALSE canonical 18 35 543 80.7341315678 2 6 0 FALSE 0 0 NA C coding 1102 3306 791 4096 35 PB.11348.1 chr20 + 1807 10 novel_not_in_catalog NTAN1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 23 52 1079 403.567838164 2 2 0 FALSE 0 0 NA A coding 120 360 55 414 30 PB.11727.1 chr20 - 2935 1 antisense novelGene_ZC3H18_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.2936.1 chr4 + 3342 1 genic_intron novelGene_929 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 15 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.8066.10 chr13 + 1619 2 novel_in_catalog ARHGAP25 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 743 498 NA 2 0 0 FALSE 0 0 NA C coding 119 357 331 687 60 PB.9048.1 chr15 - 4325 4 full-splice_match LRRC8A rna49171 3125 4 -63 -1137 multi-exon FALSE canonical 12 15 111 62.9444199274 2 3 0 FALSE 0 0 NA A coding 810 2430 227 2656 35 PB.4659.1 chr7 - 3252 26 novel_not_in_catalog MAN2C1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 248 185.47776147 40 1 0 FALSE 0 0 NA A coding 871 2613 529 3141 20 PB.9887.3 chr16 - 3395 11 incomplete-splice_match ATXN7L3 rna53625 4158 12 760 3 5prime_fragment FALSE canonical 47 637 625 181.276032613 2 0 0 FALSE 0 0 NA A coding 290 870 60 929 15 PB.1205.13 chr1 + 3139 1 genic_intron novelGene_2655 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 13 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.3272.1 chr4 + 1848 2 antisense novelGene_SOD2_AS novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 21 NA 4 7 0 FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.2472.3 chr3 + 1746 10 novel_in_catalog HBP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 283 176 1430.43699617 13 0 0 FALSE 0 0 NA C coding 514 1542 192 1733 10 PB.1462.1 chr2 + 3779 12 incomplete-splice_match LRIG1 rna7809 5263 18 1477 7 internal_fragment FALSE canonical 47 444 358 151.545372744 2 1 0 FALSE 0 0 NA B coding 660 1980 339 2318 15 PB.6302.2 chr10 + 2797 1 genic_intron novelGene_674 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1462.3 chr2 + 1686 1 novel_in_catalog LRIG1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 15 PB.1041.1 chr1 + 1761 4 full-splice_match ARPC5 rna5714 2065 4 224 80 multi-exon FALSE canonical 48 4304 201 424.994117606 275 0 0 FALSE 0 0 NA C coding 151 453 59 511 15 PB.4063.1 chr6 - 1561 1 genic_intron novelGene_1878 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.1041.2 chr1 + 2828 1 novel_in_catalog ARPC5 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 6 3 NA FALSE 0 0 NA C coding 184 552 68 619 75 PB.2677.1 chr3 - 1848 1 genic_intron novelGene_2586 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.288.11 chr1 - 2908 1 novel_in_catalog STK40 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 17 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.5169.1 chr7 + 2676 1 novel_in_catalog TEX22 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 35 PB.6716.1 chr11 + 2163 10 full-splice_match FKBP4 rna36562 2131 10 -32 0 multi-exon FALSE canonical 41 1218 220 824.674481235 6 1 0 FALSE 0 0 NA A coding 459 1377 116 1492 45 PB.662.2 chr1 - 1486 1 genic SEC22B novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 6 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.5954.8 chr9 - 2804 17 full-splice_match PIK3AP1 rna32480 3427 17 -76 699 multi-exon FALSE canonical 33 158 107 300.009999833 3 0 0 FALSE 0 0 NA C coding 805 2415 95 2509 60 PB.12101.1 chrX - 1328 2 intergenic novelGene_2225 novel NA NA NA NA no_subcategory FALSE canonical 0 0 1307 NA 2 0 0 FALSE 0 0 NA B non_coding NA NA NA NA 10 PB.2.1 chr1 + 622 2 full-splice_match ISG15 rna17 641 2 16 3 multi-exon FALSE canonical 39 753 73 NA 2 0 0 FALSE 0 0 NA A coding 165 495 71 565 20 PB.11640.4 chr20 - 4210 27 full-splice_match DHX38 rna62771 4221 27 30 -19 multi-exon FALSE canonical 43 152 3725 236.323930231 19 0 0 FALSE 0 0 NA C coding 1227 3681 127 3807 35 PB.11640.5 chr20 - 4190 27 novel_in_catalog DHX38 novel NA NA NA NA combination_of_known_junctions FALSE canonical 24 38 88 253.211374152 4 6 0 FALSE 0 0 NA C coding 1227 3681 108 3788 35 PB.1810.1 chr2 - 2794 1 antisense novelGene_SATB2_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.5954.9 chr9 - 2830 1 genic_intron novelGene_1722 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA A coding 121 363 1634 1996 90 PB.11316.1 chr20 - 727 4 full-splice_match CARHSP1 rna61424 761 4 26 8 multi-exon FALSE canonical 34 241 41 576.215237563 63 0 0 FALSE 0 0 NA C coding 147 441 49 489 40 PB.11316.2 chr20 - 3236 4 full-splice_match CARHSP1 rna61423 1409 4 -287 -1540 multi-exon FALSE canonical 34 138 489 613.742617064 4 3 0 FALSE 0 0 NA C coding 147 441 497 937 15 PB.1073.1 chr1 - 1042 6 full-splice_match CACYBP rna5931 1608 6 76 490 multi-exon FALSE canonical 45 1407 180 992.780438969 58 0 0 FALSE 0 0 NA A coding 228 684 166 849 30 PB.4918.2 chr7 - 1632 6 full-splice_match GNPNAT1 rna26583 1506 6 77 -203 multi-exon FALSE canonical 37 232 71 141.901374201 8 2 0 FALSE 0 0 NA C coding 184 552 86 637 20 PB.5159.1 chr7 + 1333 7 full-splice_match ZFYVE21 rna27985 1446 7 103 10 multi-exon FALSE canonical 43 249 147 225.208792013 22 2 0 FALSE 0 0 NA C coding 234 702 10 711 35 PB.1846.2 chr2 + 3473 1 genic_intron novelGene_2469 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.5209.1 chr8 + 1151 1 intergenic novelGene_305 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.1830.4 chr2 - 2675 25 incomplete-splice_match U2SURP rna9754 8287 33 1133 4479 internal_fragment FALSE canonical 42 793 1254 431.761508243 2 0 0 FALSE 0 0 NA B coding 882 2646 28 2673 50 PB.3030.1 chr4 + 1491 11 full-splice_match BCKDHB rna16619 1561 11 68 2 multi-exon FALSE canonical 39 497 207 141.781522068 17 0 0 FALSE 0 0 NA A coding 392 1176 12 1187 0 PB.4302.1 chr6 - 1601 2 full-splice_match ZBED8 rna23218 2856 2 20 1235 multi-exon FALSE canonical 42 412 437 NA 8 0 0 FALSE 0 0 NA A coding 371 1113 487 1599 25 PB.6822.1 chr11 + 1549 9 full-splice_match DERA rna37103 1686 9 131 6 multi-exon FALSE canonical 41 580 84 230.523317693 26 0 0 FALSE 0 0 NA C coding 318 954 54 1007 40 PB.7512.1 chr12 - 3710 6 full-splice_match CD302 rna40515 4014 6 74 230 multi-exon FALSE canonical 34 207 124 492.289548945 8 1 0 FALSE 0 0 NA A coding 232 696 58 753 45 PB.6822.2 chr11 + 2871 7 novel_in_catalog DERA novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 580 68 239.422221191 2 5 0 FALSE 0 0 NA C coding 282 846 38 883 75 PB.8419.1 chr14 + 2940 3 novel_not_in_catalog CHRM1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 6 349 3.46410161514 2 5 0 FALSE 0 0 NA A coding 460 1380 520 1899 20 PB.6617.1 chr10 + 1152 1 incomplete-splice_match TNRC6B rna36063 17970 21 6990 9829 mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 65 PB.5598.1 chr8 - 1745 13 full-splice_match NAPRT rna30230 2930 13 1180 5 multi-exon FALSE canonical 7 9 381 144.775688567 22 0 0 FALSE 0 0 NA C coding 538 1614 28 1641 10 PB.8856.2 chr14 - 1749 5 novel_not_in_catalog CD3D novel NA NA NA NA any annotated donor/acceptor FALSE canonical 9 58 53 1177.69350852 2 0 0 FALSE 0 0 NA A coding 183 549 1113 1661 15 PB.1519.1 chr2 - 2141 11 full-splice_match ALAS1 rna8181 2247 11 76 30 multi-exon FALSE canonical 41 546 97 319.904673301 10 1 0 FALSE 0 0 NA C coding 640 1920 119 2038 45 PB.7298.1 chr11 - 967 8 full-splice_match TESC rna39481 920 8 -64 17 multi-exon FALSE canonical 38 454 203 365.976775219 3 0 0 FALSE 0 0 NA A coding 214 642 146 787 85 PB.5172.236 chr7 + 1500 8 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 212 2724.88531869 6 19 0 TRUE 0 0 NA B coding 129 387 78 464 25 PB.3387.2 chr5 - 1522 5 incomplete-splice_match SEL1L3 rna18475 4336 24 2806 8 5prime_fragment FALSE canonical 43 424 311 76.9350375317 2 0 0 FALSE 0 0 NA B coding 159 477 45 521 45 PB.5172.235 chr7 + 1486 9 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 212 2245.43603783 2 11 0 TRUE 0 0 NA B coding 245 735 702 1436 15 PB.1728.1 chr2 + 4097 5 full-splice_match NCEH1 rna9249 4252 5 146 9 multi-exon FALSE canonical 31 320 218 160.549057923 13 4 0 FALSE 0 0 NA A coding 408 1224 81 1304 15 PB.9537.4 chr16 - 2901 1 novel_in_catalog PER1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 33 11 NA FALSE 0 0 NA C coding 124 372 1706 2077 90 PB.9537.3 chr16 - 3165 17 novel_in_catalog PER1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 5 5 2223 72.5396443333 2 3 0 FALSE 0 0 NA C coding 804 2412 186 2597 10 PB.11607.1 chr20 + 1576 1 intergenic novelGene_1092 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA A non_coding NA NA NA NA 30 PB.9537.1 chr16 - 4639 23 full-splice_match PER1 rna51818 4815 23 172 4 multi-exon FALSE canonical 2 4 2623 69.8212002188 2 21 1 FALSE 0 0 NA C coding 1292 3876 163 4038 25 PB.10215.1 chr17 + 1736 1 genic_intron novelGene_466 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5172.585 chr7 + 1549 5 novel_not_in_catalog LOC711872 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 68 3660.69515256 2 3 0 TRUE 0 0 NA B coding 375 1125 301 1425 35 PB.3683.1 chr5 + 1958 15 incomplete-splice_match NAA15 rna20078 5340 20 44 3338 3prime_fragment FALSE canonical 43 307 193 257.658688967 7 0 0 FALSE 0 0 NA C coding 606 1818 140 1957 70 PB.3904.11 chr6 + 6144 1 novel_in_catalog PARP8 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 13 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.3904.10 chr6 + 6319 6 novel_in_catalog PARP8 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 579 4839 115.446957517 2 19 0 FALSE 0 0 NA C coding 149 447 4727 5173 55 PB.5172.587 chr7 + 1601 5 novel_not_in_catalog LOC711872 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 116 3660.69515256 2 1 0 FALSE 0 0 NA B coding 375 1125 353 1477 35 PB.6571.2 chr10 + 1323 3 full-splice_match MPST rna35888 1261 3 -30 -32 multi-exon FALSE canonical 25 70 110 585.499786507 2 1 0 FALSE 0 0 NA A coding 317 951 75 1025 20 PB.6899.4 chr11 - 5684 15 full-splice_match SCAF11 rna37579 7609 15 -6 1931 multi-exon FALSE canonical 48 1056 4368 386.217555272 2 8 0 FALSE 0 0 NA C coding 1464 4392 241 4632 50 PB.7713.1 chr12 + 2969 9 full-splice_match DNAJB2 rna41727 3130 9 154 7 multi-exon FALSE canonical 41 179 50 571.069172693 2 2 0 FALSE 0 0 NA C coding 324 972 87 1058 15 PB.7713.2 chr12 + 1499 1 genic DNAJB2 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 5 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 5 PB.9166.5 chr15 + 6636 14 full-splice_match PTBP3 rna49751 7054 14 42 376 multi-exon FALSE canonical 46 699 115 397.742378934 11 4 0 FALSE 0 0 NA C coding 521 1563 167 1729 75 PB.9166.4 chr15 + 2504 14 full-splice_match PTBP3 rna49747 7103 14 83 4516 multi-exon FALSE canonical 46 699 114 359.296534912 3 1 0 FALSE 0 0 NA C coding 524 1572 166 1737 50 PB.2082.5 chr3 - 2888 13 novel_not_in_catalog IFNAR2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 3 3 1103 355.115474177 2 3 0 FALSE 0 0 NA C coding 545 1635 395 2029 20 PB.3130.1 chr4 + 4137 3 novel_in_catalog RAET1G novel NA NA NA NA combination_of_known_junctions FALSE canonical 2 2 164 0 2 7 0 FALSE 0 0 NA A coding 230 690 80 769 50 PB.10888.1 chr19 - 1596 6 novel_not_in_catalog FXYD3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 5 72 165.317875621 2 2 0 FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.2082.2 chr3 - 2006 8 novel_not_in_catalog IL10RB novel NA NA NA NA any annotated donor/acceptor FALSE canonical 24 47 820 496.398025782 5 2 0 FALSE 0 0 NA C coding 356 1068 82 1149 15 PB.2082.1 chr3 - 1673 7 full-splice_match IL10RB rna11093 1942 7 2 267 multi-exon FALSE canonical 36 281 147 311.281223333 104 2 0 FALSE 0 0 NA C coding 325 975 99 1073 85 PB.9166.2 chr15 + 6935 13 full-splice_match PTBP3 rna49748 6933 13 -6 4 multi-exon FALSE canonical 37 209 288 508.582343382 4 10 0 FALSE 0 0 NA C coding 443 1329 328 1656 25 PB.2470.5 chr3 - 1610 1 genic_intron novelGene_2202 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.789.2 chr1 + 1678 8 novel_in_catalog RRNAD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 26 43 333 243.363925018 2 6 0 FALSE 0 0 NA B coding 411 1233 250 1482 5 PB.4247.2 chr6 + 3455 4 novel_not_in_catalog SLC26A2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2356 151.343979068 2 3 0 TRUE 0 0 NA C coding 739 2217 125 2341 85 PB.4247.1 chr6 + 3522 3 full-splice_match SLC26A2 rna23004 8099 3 184 4393 multi-exon FALSE canonical 37 270 63 42.4970587218 44 7 0 FALSE 0 0 NA C coding 739 2217 89 2305 85 PB.11751.3 chr20 + 1767 13 full-splice_match CDK10 rna63143 1849 13 76 6 multi-exon FALSE canonical 31 101 688 74.966659256 5 1 0 FALSE 0 0 NA A coding 360 1080 21 1100 35 PB.579.2 chr1 + 2789 14 novel_in_catalog GPSM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 231 306 76.8505042274 2 0 0 FALSE 0 0 NA C coding 686 2058 251 2308 30 PB.6142.2 chr10 + 2768 6 novel_in_catalog DIDO1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 339 87 587.368708734 15 1 0 FALSE 0 0 NA B coding 562 1686 288 1973 15 PB.6142.3 chr10 + 2731 6 novel_in_catalog DIDO1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 449 47 545.378767463 66 0 0 FALSE 0 0 NA B coding 562 1686 248 1933 15 PB.6142.1 chr10 + 5679 15 novel_in_catalog DIDO1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 218 1928 647.845660632 5 0 0 FALSE 0 0 NA B coding 1186 3558 341 3898 80 PB.6142.7 chr10 + 3564 14 incomplete-splice_match DIDO1 rna33548 8541 16 329 4648 internal_fragment FALSE canonical 36 159 3518 577.966261991 2 1 0 FALSE 0 0 NA B coding 911 2733 830 3562 50 PB.6142.4 chr10 + 2971 7 novel_not_in_catalog DIDO1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 293 835.687740726 5 0 0 FALSE 0 0 NA B coding 562 1686 491 2176 15 PB.6142.5 chr10 + 5623 15 novel_in_catalog DIDO1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 218 1870 643.591485338 4 1 0 FALSE 0 0 NA B coding 1186 3558 283 3840 90 PB.3821.1 chr6 - 2764 1 antisense novelGene_MTRR_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.4784.1 chr7 + 2907 1 antisense novelGene_TM2D3_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.9670.1 chr16 + 3005 13 full-splice_match RAB11FIP4 rna52462 3132 13 127 0 multi-exon FALSE canonical 23 78 127 215.687273616 22 2 0 FALSE 0 0 NA C coding 535 1605 98 1702 10 PB.3537.2 chr5 - 3787 25 incomplete-splice_match POLR2B rna19196 4507 29 -46 766 internal_fragment FALSE canonical 47 1439 2051 310.623566395 71 0 0 FALSE 0 0 NA B coding 1174 3522 97 3618 15 PB.3159.1 chr4 - 1722 1 intergenic novelGene_2117 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 10 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 15 PB.11330.4 chr20 + 3986 2 novel_not_in_catalog CLEC16A novel NA NA NA NA not any annotated donor/acceptor TRUE canonical 0 0 1987 NA 2 9 1 TRUE 0 0 NA B coding 115 345 11 355 30 PB.11408.1 chr20 + 1909 7 full-splice_match CHP2 rna61739 2356 7 440 7 multi-exon FALSE canonical 0 0 35 5.38516480713 24 0 0 FALSE 0 0 NA A coding 148 444 113 556 20 PB.11330.1 chr20 + 6782 24 novel_not_in_catalog CLEC16A novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 4933 145.406327235 2 13 1 TRUE 0 0 NA B coding 1051 3153 149 3301 60 PB.11330.2 chr20 + 3349 1 novel_in_catalog CLEC16A novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA B non_coding NA NA NA NA 80 PB.2825.1 chr4 - 1965 20 full-splice_match ABHD16A rna15488 2086 20 115 6 multi-exon FALSE canonical 48 606 669 346.29034061 41 1 0 FALSE 0 0 NA A coding 558 1674 44 1717 30 PB.3277.1 chr4 - 1880 12 full-splice_match TCP1 rna17775 2447 12 108 459 multi-exon FALSE canonical 48 2036 1414 682.93923595 51 0 0 FALSE 0 0 NA C coding 556 1668 125 1792 15 PB.10500.1 chr18 - 2940 1 intergenic novelGene_1080 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 12 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.5368.3 chr8 + 2551 1 genic_intron novelGene_1193 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.5368.2 chr8 + 1221 1 genic_intron novelGene_1192 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.4665.1 chr7 - 1392 9 fusion LOC712678_LOC106999243 novel NA NA NA NA no_subcategory FALSE canonical 36 148 37 156.144164156 6 1 0 TRUE 0 0 NA A coding 360 1080 43 1122 35 PB.1733.13 chr2 - 4320 3 novel_in_catalog FNDC3B novel NA NA NA NA combination_of_known_junctions FALSE canonical 38 195 144 259.499518304 3 11 0 FALSE 0 0 NA B non_coding NA NA NA NA 75 PB.6839.1 chr11 - 1429 1 genic_intron novelGene_546 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1825.2 chr2 + 2608 20 full-splice_match PLOD2 rna9741 3508 20 894 6 multi-exon FALSE canonical 29 121 1583 112.15614116 4 1 0 FALSE 0 0 NA C coding 758 2274 21 2294 55 PB.10989.1 chr19 - 751 5 full-splice_match RABAC1 rna59370 773 5 28 -6 multi-exon FALSE canonical 46 304 94 500.561684511 8 1 0 FALSE 0 0 NA A coding 185 555 39 593 30 PB.1809.1 chr2 + 3196 12 novel_not_in_catalog SATB2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 117 206.564759821 16 2 0 TRUE 0 0 NA C coding 733 2199 258 2456 85 PB.6035.1 chr9 - 3519 2 novel_in_catalog ITPRIP novel NA NA NA NA combination_of_known_junctions FALSE canonical 28 77 103 NA 39 0 0 FALSE 0 0 NA A coding 552 1656 117 1772 60 PB.9733.1 chr16 + 1603 4 full-splice_match COX11 rna52779 915 4 2 -690 multi-exon FALSE canonical 42 472 370 192.462983454 11 0 0 FALSE 0 0 NA A coding 276 828 5 832 30 PB.3474.1 chr5 + 3199 5 full-splice_match SCD5 rna18873 1713 5 52 -1538 multi-exon FALSE canonical 27 513 501 312.221075522 17 4 0 FALSE 0 0 NA A coding 330 990 270 1259 15 PB.1669.1 chr2 + 3165 7 novel_in_catalog TRANK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 458 588 60.4069532422 10 2 0 FALSE 0 0 NA B coding 296 888 61 948 90 PB.7812.1 chr12 + 5437 8 full-splice_match ING5 rna42327 1068 8 -8 -4361 multi-exon FALSE canonical 35 208 508 56.9649014745 2 4 0 FALSE 0 0 NA A coding 236 708 39 746 45 PB.4878.1 chr7 + 2910 24 full-splice_match CTAGE5 rna26423 3181 24 266 5 multi-exon FALSE canonical 46 481 133 448.901993758 35 0 0 FALSE 0 0 NA C coding 802 2406 71 2476 35 PB.1669.5 chr2 + 6254 1 novel_in_catalog TRANK1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 9 5 NA FALSE 0 0 NA B coding 129 387 1550 1936 75 PB.1669.4 chr2 + 5413 6 novel_in_catalog TRANK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 458 593 64.08587988 2 5 0 FALSE 0 0 NA B coding 343 1029 66 1094 80 PB.9142.1 chr15 - 3590 9 full-splice_match C15H9orf91 rna49641 4596 9 282 724 multi-exon FALSE canonical 9 18 102 88.7130204649 4 1 0 FALSE 0 0 NA A coding 342 1026 181 1206 35 PB.2348.2 chr3 + 1582 3 full-splice_match MTERF1 rna12640 1628 3 11 35 multi-exon FALSE canonical 33 97 63 212.499411764 3 0 0 FALSE 0 0 NA C coding 399 1197 94 1290 75 PB.3371.1 chr5 + 3203 21 full-splice_match NCAPG rna18395 3302 21 83 16 multi-exon FALSE canonical 16 233 199 158.079094127 24 2 0 FALSE 0 0 NA A coding 1015 3045 89 3133 50 PB.253.1 chr1 + 3920 14 novel_not_in_catalog KPNA6 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 37 281 42 338.433154404 11 3 0 TRUE 0 0 NA A coding 536 1608 39 1646 65 PB.1733.12 chr2 - 2717 1 genic_intron novelGene_2081 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 25 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.253.3 chr1 + 2850 1 genic_intron novelGene_718 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.7955.1 chr13 + 1751 1 antisense novelGene_LOC100425937_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 38 2 NA FALSE 0 0 NA A coding 139 417 1289 1705 45 PB.1069.1 chr1 + 1656 4 antisense novelGene_RASAL2_AS novel NA NA NA NA no_subcategory FALSE canonical 19 37 410 26.7394839142 2 6 0 FALSE 0 0 NA A coding 39 117 563 679 35 PB.2475.2 chr3 + 1571 7 full-splice_match DUS4L rna13366 1968 7 -137 534 multi-exon FALSE canonical 21 33 225 75.1398695767 2 0 0 FALSE 0 0 NA A coding 312 936 262 1197 35 PB.5789.2 chr9 - 2443 8 incomplete-splice_match CCSER2 rna31523 3528 12 28 1057 internal_fragment FALSE canonical 31 84 219 185.440017256 3 0 0 FALSE 0 0 NA C coding 728 2184 259 2442 70 PB.1819.9 chr2 + 2832 1 novel_in_catalog ANKRD44 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 95 PB.939.3 chr1 - 3558 18 incomplete-splice_match CR2 rna5125 4235 20 671 6 5prime_fragment FALSE canonical 5 112 1489 145.722338713 2 0 0 FALSE 0 0 NA C coding 825 2475 313 2787 30 PB.1819.6 chr2 + 2558 1 genic_intron novelGene_2339 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 12 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.690.2 chr1 - 1448 7 novel_not_in_catalog ANP32E novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 387 642.145622114 25 10 1 TRUE 0 0 NA A coding 219 657 480 1136 25 PB.122.1 chr1 + 2719 1 genic_intron novelGene_424 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA A coding 148 444 743 1186 15 PB.1819.7 chr2 + 6085 1 genic_intron novelGene_2340 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.8705.1 chr14 + 4241 14 full-splice_match SLCO2B1 rna47308 4077 14 5 -169 multi-exon FALSE canonical 20 85 1888 76.6681159283 2 2 0 FALSE 0 0 NA C coding 687 2061 356 2416 20 PB.11709.1 chr20 + 5716 2 novel_not_in_catalog GSE1 novel NA NA NA NA not any annotated donor/acceptor TRUE canonical 0 0 861 NA 3 5 0 TRUE 0 0 NA B coding 145 435 1116 1550 80 PB.5789.1 chr9 - 3537 10 full-splice_match CCSER2 rna31515 7681 10 27 4117 multi-exon FALSE canonical 31 84 220 174.559445462 2 2 0 FALSE 0 0 NA C coding 1047 3141 260 3400 10 PB.10213.12 chr17 - 2906 1 genic_intron novelGene_465 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.10213.11 chr17 - 2758 2 novel_not_in_catalog ELF1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 89 NA 2 12 0 FALSE 0 0 NA C non_coding NA NA NA NA 5 PB.5243.1 chr8 + 3371 11 full-splice_match CHMP7 rna28546 3443 11 63 9 multi-exon FALSE canonical 24 123 909 436.130714351 9 4 0 FALSE 0 0 NA C coding 453 1359 611 1969 15 PB.11346.2 chr20 + 2871 8 full-splice_match BFAR rna61537 1699 8 93 -1265 multi-exon FALSE canonical 33 96 106 252.37670257 2 4 0 FALSE 0 0 NA C coding 450 1350 120 1469 55 PB.11346.1 chr20 + 2914 8 full-splice_match BFAR rna61536 3037 8 109 14 multi-exon FALSE canonical 44 538 636 150.359569034 10 5 0 FALSE 0 0 NA C coding 450 1350 169 1518 50 PB.5243.2 chr8 + 3381 11 novel_not_in_catalog CHMP7 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 195 466.440778663 2 3 0 TRUE 0 0 NA C coding 453 1359 621 1979 15 PB.5243.4 chr8 + 1522 9 novel_in_catalog CHMP7 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 123 351 342.125707891 4 2 0 FALSE 0 0 NA C coding 477 1431 53 1483 25 PB.5142.2 chr7 + 3566 13 full-splice_match PPP2R5C rna27901 4502 13 269 667 multi-exon FALSE canonical 48 947 1402 1078.85216782 7 1 0 FALSE 0 0 NA C coding 475 1425 107 1531 75 PB.8684.1 chr14 + 2351 17 novel_not_in_catalog ATG16L2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 332 123.963704365 2 7 0 TRUE 0 0 NA A coding 346 1038 752 1789 15 PB.6624.1 chr10 - 1214 12 full-splice_match ST13 rna36089 3003 12 6 1783 multi-exon FALSE canonical 48 2487 922 2422.16432143 228 0 0 FALSE 0 0 NA A coding 369 1107 76 1182 50 PB.9820.1 chr16 - 2094 4 full-splice_match ORMDL3 rna53247 2266 4 171 1 multi-exon FALSE canonical 40 262 107 570.231531924 3 1 0 FALSE 0 0 NA A coding 153 459 130 588 0 PB.10683.1 chr19 - 3077 10 novel_not_in_catalog ZNF558 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 272 77.7110030819 2 2 0 FALSE 0 0 NA A coding 402 1206 689 1894 50 PB.11728.2 chr20 - 2091 1 novel_in_catalog LOC696748 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA C coding 142 426 701 1126 80 PB.9407.13 chr15 - 5584 28 novel_not_in_catalog ZCCHC6 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 4581 664.978947035 4 0 0 TRUE 0 0 NA C coding 1469 4407 172 4578 30 PB.9407.11 chr15 - 5743 27 novel_in_catalog ZCCHC6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 36 463 299 585.74226414 3 0 0 FALSE 0 0 NA C coding 1490 4470 331 4800 30 PB.4593.1 chr7 - 1683 9 novel_not_in_catalog SPG21 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 227 551.694661928 97 8 2 FALSE 0 0 NA A coding 307 921 168 1088 15 PB.118.8 chr1 - 5695 37 incomplete-splice_match UBR4 rna660 15935 106 4480 5760 internal_fragment FALSE canonical 34 211 4319 341.877170925 2 1 0 FALSE 0 0 NA B coding 1898 5694 2 5695 70 PB.9407.16 chr15 - 2892 1 novel_in_catalog ZCCHC6 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 8 5 NA FALSE 0 0 NA C coding 105 315 2215 2529 80 PB.9407.15 chr15 - 5652 27 novel_not_in_catalog ZCCHC6 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 4641 676.950515178 3 11 0 TRUE 0 0 NA C coding 1494 4482 232 4713 35 PB.9407.14 chr15 - 5900 29 novel_not_in_catalog ZCCHC6 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 33 102 2050 718.088434665 2 4 0 FALSE 0 0 NA C coding 766 2298 2546 4843 30 PB.7502.11 chr12 - 1364 13 novel_not_in_catalog PRPF40A novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 191 584.491231756 2 0 0 FALSE 0 0 NA C coding 446 1338 27 1364 75 PB.7502.10 chr12 - 1230 13 incomplete-splice_match PRPF40A rna40419 6827 26 249 5348 internal_fragment FALSE canonical 41 683 54 432.305447572 5 0 0 FALSE 0 0 NA C coding 405 1215 16 1230 75 PB.8308.6 chr14 + 2860 1 genic_intron novelGene_147 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 12 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.9407.18 chr15 - 6033 28 novel_not_in_catalog ZCCHC6 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 39 265 4699 667.877234228 2 8 1 FALSE 0 0 NA C coding 931 2793 1921 4713 80 PB.6858.2 chr11 + 4070 15 full-splice_match STK38L rna37329 5080 15 36 974 multi-exon FALSE canonical 0 0 36 287.125408141 7 3 0 FALSE 0 0 NA C coding 464 1392 162 1553 20 PB.118.1 chr1 - 6942 46 incomplete-splice_match UBR4 rna655 15923 106 8976 5 5prime_fragment TRUE canonical 34 371 5504 206.378293432 2 1 0 FALSE 0 0 NA B coding 2184 6552 72 6623 40 PB.8308.2 chr14 + 2668 10 novel_not_in_catalog KMT5B novel NA NA NA NA any annotated donor/acceptor FALSE canonical 32 157 161 455.142834723 4 1 0 TRUE 0 0 NA B coding 393 1179 238 1416 20 PB.8308.3 chr14 + 3235 10 novel_not_in_catalog KMT5B novel NA NA NA NA any annotated donor/acceptor FALSE canonical 11 18 160 498.026103734 2 2 0 FALSE 0 0 NA B coding 814 2442 214 2655 85 PB.8945.1 chr14 - 2059 1 antisense novelGene_ADAMTS15_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A coding 111 333 962 1294 40 PB.4991.2 chr7 - 2980 1 genic_intron novelGene_2186 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.3922.1 chr6 - 4014 1 incomplete-splice_match IL6ST rna21397 7268 16 3245 10 mono-exon FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA C non_coding NA NA NA NA 20 PB.1973.1 chr2 - 3828 23 incomplete-splice_match MUC4 rna10564 4355 24 488 39 5prime_fragment FALSE canonical 0 0 1142 8.18535277187 2 13 0 FALSE 0 0 NA A coding 920 2760 692 3451 35 PB.7594.13 chr12 + 3144 20 novel_in_catalog COL3A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 28 1208 380 1589.22024905 2 3 0 FALSE 0 0 NA C coding 417 1251 226 1476 25 PB.1127.2 chr1 - 633 6 full-splice_match MGST3 rna6191 608 6 15 -40 multi-exon FALSE canonical 45 4985 55 1706.2086625 2 0 0 FALSE 0 0 NA C coding 152 456 63 518 30 PB.2956.1 chr4 + 1255 9 full-splice_match POLR1C rna16099 1336 9 71 10 multi-exon FALSE canonical 45 985 389 247.73574631 6 0 0 FALSE 0 0 NA A coding 346 1038 8 1045 45 PB.2984.1 chr4 - 3115 17 full-splice_match MCM3 rna16257 3069 17 -48 2 multi-exon FALSE canonical 27 155 1170 143.808900976 126 0 0 FALSE 0 0 NA A coding 808 2424 138 2561 25 PB.1604.2 chr2 - 3643 1 full-splice_match CCR2 rna8655 1083 1 -209 -2351 mono-exon FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA C coding 360 1080 210 1289 35 PB.9608.2 chr16 + 3988 1 genic_intron novelGene_461 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.8323.2 chr14 + 927 2 full-splice_match PTPRCAP rna45019 1262 2 332 3 multi-exon FALSE canonical 19 47 66 NA 23 2 0 FALSE 0 0 NA A coding 206 618 64 681 20 PB.10562.1 chr19 - 954 6 full-splice_match GAMT rna57149 961 6 8 -1 multi-exon FALSE canonical 21 100 229 792.501735014 2 0 0 FALSE 0 0 NA A coding 236 708 49 756 20 PB.10492.1 chr18 + 2973 1 genic_intron novelGene_1050 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 9 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.6735.2 chr11 + 2083 10 novel_not_in_catalog LTBR novel NA NA NA NA any annotated donor/acceptor FALSE canonical 6 6 356 236.412774613 3 1 0 FALSE 0 0 NA C coding 429 1287 167 1453 25 PB.2567.1 chr3 + 1470 10 full-splice_match LOC721151 rna13810 1654 10 176 8 multi-exon FALSE canonical 27 123 862 375.863006959 66 3 0 FALSE 0 0 NA A coding 316 948 204 1151 45 PB.11509.1 chr20 - 1522 1 genic SNX20 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.1841.1 chr2 + 2540 1 genic_intron novelGene_2454 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.12092.2 chrX + 2274 6 full-splice_match FHL1 rna65227 2426 6 147 5 multi-exon FALSE canonical 28 9172 801 1607.04293658 3 0 0 FALSE 0 0 NA C coding 280 840 114 953 20 PB.9931.1 chr16 + 1353 9 full-splice_match METTL2A rna53883 1565 9 1 211 multi-exon FALSE canonical 44 524 565 57.6888204074 8 0 0 FALSE 0 0 NA A coding 379 1137 5 1141 25 PB.5172.354 chr7 + 1545 10 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 311 3510.66930941 2 16 0 TRUE 0 0 NA B coding 196 588 822 1409 15 PB.592.1 chr1 + 3724 18 novel_not_in_catalog AMPD2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1063 257.56746689 26 10 0 TRUE 0 0 NA B coding 565 1695 1129 2823 15 PB.1736.1 chr2 - 1401 1 genic_intron novelGene_2095 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.1458.1 chr2 + 1938 1 intergenic novelGene_1472 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 35 PB.4715.1 chr7 - 3695 3 full-splice_match KLHL25 rna25508 3616 3 -33 -46 multi-exon FALSE canonical 1 1 178 5.47722557505 16 0 0 FALSE 0 0 NA A coding 589 1767 190 1956 30 PB.3178.3 chr4 - 4054 9 full-splice_match TNFAIP3 rna17252 4424 9 -73 443 multi-exon FALSE canonical 29 187 126 189.132228877 48 1 0 FALSE 0 0 NA C coding 790 2370 142 2511 85 PB.3611.1 chr5 - 2441 7 full-splice_match DNAJB14 rna19514 5890 7 141 3308 multi-exon FALSE canonical 28 70 147 461.171334755 4 7 0 FALSE 0 0 NA C coding 312 936 44 979 50 PB.4989.1 chr7 + 1389 8 full-splice_match ARG2 rna26929 2039 8 126 524 multi-exon FALSE canonical 42 773 245 118.050836507 5 2 0 FALSE 0 0 NA A coding 354 1062 62 1123 20 PB.3178.5 chr4 - 1373 1 genic TNFAIP3 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 12 NA FALSE 0 0 NA C coding 69 207 284 490 70 PB.10074.1 chr16 + 2837 4 full-splice_match C1QTNF1 rna54459 3033 4 194 2 multi-exon FALSE canonical 5 11 252 95.8331884057 2 4 0 FALSE 0 0 NA C coding 281 843 267 1109 10 PB.10074.2 chr16 + 3083 5 full-splice_match C1QTNF1 rna54460 2960 5 -130 7 multi-exon FALSE canonical 5 6 248 96.441692229 4 1 0 FALSE 0 0 NA C coding 281 843 518 1360 20 PB.10074.3 chr16 + 2810 4 full-splice_match C1QTNF1 rna54461 888 4 -201 -1721 multi-exon FALSE canonical 16 30 228 87.544274513 99 5 0 FALSE 0 0 NA C coding 281 843 243 1085 20 PB.7793.1 chr12 + 3327 1 genic_intron novelGene_2090 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.7417.1 chr12 + 1464 1 intergenic novelGene_281 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.3062.1 chr4 + 2850 19 full-splice_match UFL1 rna16817 2832 19 -7 -11 multi-exon FALSE canonical 45 462 108 338.583815325 48 0 0 FALSE 0 0 NA C coding 793 2379 32 2410 85 PB.10964.2 chr19 - 3233 14 novel_not_in_catalog AKT2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 161 444.102465654 51 14 0 TRUE 0 0 NA B coding 481 1443 253 1695 20 PB.3611.4 chr5 - 1637 9 novel_not_in_catalog DNAJB14 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 300 558.367262651 2 14 2 TRUE 0 0 NA C coding 373 1119 14 1132 65 PB.10964.1 chr19 - 1546 1 incomplete-splice_match AKT2 rna59216 5266 14 1701 2020 mono-exon FALSE canonical NA NA NA NA 6 7 NA FALSE 0 0 NA B non_coding NA NA NA NA 20 PB.11875.2 chrX - 1728 4 novel_in_catalog SLC35A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 107 121 44.3734154647 2 0 0 FALSE 0 0 NA B coding 250 750 31 780 20 PB.11710.1 chr20 + 4035 13 incomplete-splice_match GSE1 rna62992 7209 15 459 2715 internal_fragment FALSE canonical 6 8 467 132.242202039 7 2 0 FALSE 0 0 NA B coding 979 2937 175 3111 85 PB.3809.1 chr6 - 3745 1 novel_in_catalog CLPTM1L novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11875.1 chrX - 3291 1 novel_in_catalog SLC35A2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 6 0 NA FALSE 0 0 NA B coding 235 705 1474 2178 15 PB.358.2 chr1 + 2747 1 genic_intron novelGene_946 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A coding 55 165 155 319 90 PB.4894.1 chr7 + 1537 2 full-splice_match ARF6 rna26503 3919 2 100 2282 multi-exon FALSE canonical 30 111 40 NA 29 2 0 FALSE 0 0 NA C coding 175 525 522 1046 25 PB.4894.2 chr7 + 1639 1 incomplete-splice_match ARF6 rna26503 3919 2 2276 5 mono-exon FALSE canonical NA NA NA NA 36 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 15 PB.358.1 chr1 + 1424 6 incomplete-splice_match RNF220 rna1903 2895 15 1469 2 internal_fragment FALSE canonical 48 675 406 303.004950455 2 2 0 FALSE 0 0 NA A coding 110 330 146 475 0 PB.5064.1 chr7 - 2945 17 full-splice_match GALC rna27398 4088 17 -53 1196 multi-exon FALSE canonical 32 109 200 153.37535656 23 2 0 FALSE 0 0 NA C coding 685 2055 6 2060 80 PB.3262.2 chr4 + 3161 10 novel_in_catalog SESN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 45 572 694 221.756623351 2 4 0 FALSE 0 0 NA C coding 551 1653 416 2068 15 PB.7325.1 chr11 + 1880 10 full-splice_match ACADS rna39576 1888 10 6 2 multi-exon FALSE canonical 34 331 125 349.402346872 14 1 0 FALSE 0 0 NA A coding 412 1236 80 1315 10 PB.3262.4 chr4 + 1693 1 novel_in_catalog SESN1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 15 NA FALSE 0 0 NA C coding 79 237 65 301 70 PB.3750.1 chr5 - 3490 1 genic_intron novelGene_2430 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.9409.4 chr15 + 5900 1 novel_in_catalog DAPK1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 16 NA FALSE 0 0 NA C coding 128 384 2100 2483 75 PB.10449.1 chr18 + 4067 1 genic_intron novelGene_735 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 23 11 NA FALSE 0 0 NA A coding 611 1833 768 2600 95 PB.4493.5 chr7 + 1049 1 genic_intron novelGene_478 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 102 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.10886.3 chr19 + 1584 1 novel_in_catalog GRAMD1A novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA C non_coding NA NA NA NA 10 PB.10554.2 chr19 + 4069 23 full-splice_match HMHA1 rna57121 4228 23 157 2 multi-exon FALSE canonical 26 152 509 228.729097406 246 1 0 FALSE 0 0 NA C coding 1132 3396 89 3484 5 PB.10554.1 chr19 + 4214 22 novel_in_catalog HMHA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 26 152 578 226.254281727 5 8 0 FALSE 0 0 NA C coding 913 2739 158 2896 5 PB.5845.1 chr9 - 4127 20 full-splice_match PALD1 rna31905 4640 20 45 468 multi-exon FALSE canonical 5 6 263 51.7590571784 2 5 0 FALSE 0 0 NA A coding 856 2568 293 2860 95 PB.10554.6 chr19 + 3612 22 incomplete-splice_match HMHA1 rna57123 4064 23 450 2 internal_fragment FALSE canonical 26 152 52 233.038623408 18 0 0 FALSE 0 0 NA C coding 972 2916 112 3027 5 PB.10554.5 chr19 + 4000 23 novel_not_in_catalog HMHA1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 3002 255.058816746 2 1 0 TRUE 0 0 NA C coding 1027 3081 113 3193 5 PB.10554.4 chr19 + 4145 24 novel_not_in_catalog HMHA1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 155 249.453402462 2 4 0 TRUE 0 0 NA C coding 1142 3426 140 3565 10 PB.3170.1 chr4 - 2849 1 incomplete-splice_match HECA rna17221 5628 4 2747 33 mono-exon FALSE canonical NA NA NA NA 5 7 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.5172.468 chr7 + 1543 9 fusion LOC720839_LOC721089 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 279 2765.69575333 2 9 0 TRUE 0 0 NA B non_coding NA NA NA NA 20 PB.565.1 chr1 - 2999 8 full-splice_match DPH5 rna3091 1679 8 -41 -1279 multi-exon FALSE canonical 42 305 367 116.26693425 7 1 0 FALSE 0 0 NA A coding 285 855 108 962 40 PB.10429.6 chr18 + 3454 2 novel_in_catalog MAPRE2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1540 1888 NA 3 3 0 FALSE 0 0 NA C coding 171 513 362 874 30 PB.823.3 chr1 - 2576 9 novel_not_in_catalog SLAMF6 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 1541 53.0565735795 3 2 0 TRUE 0 0 NA C coding 332 996 23 1018 20 PB.3394.1 chr5 - 1662 2 intergenic novelGene_746 novel NA NA NA NA no_subcategory FALSE canonical 9 38 107 NA 2 0 0 FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.5172.469 chr7 + 1527 7 fusion LOC720839_LOC721089 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 398 2837.78575654 2 13 0 TRUE 0 0 NA B coding 470 1410 76 1485 20 PB.10429.2 chr18 + 2667 7 full-splice_match MAPRE2 rna56388 4254 7 83 1504 multi-exon FALSE canonical 48 1399 342 281.714394378 120 0 0 FALSE 0 0 NA C coding 327 981 93 1073 40 PB.10429.3 chr18 + 3079 6 novel_in_catalog MAPRE2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1399 374 301.199269587 4 11 0 FALSE 0 0 NA C coding 309 927 125 1051 80 PB.5596.2 chr8 - 3408 13 novel_not_in_catalog ZC3H3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 2614 28.930952283 2 10 0 FALSE 0 0 NA C coding 1107 3321 23 3343 10 PB.10429.1 chr18 + 1510 1 novel_in_catalog MAPRE2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 16 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.6360.1 chr10 + 2769 5 novel_in_catalog ITPA novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 209 2207 62.329768169 5 4 0 FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.11113.7 chr19 - 1622 1 genic_intron novelGene_968 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 13 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.1903.1 chr2 + 778 4 full-splice_match RPL15 rna10174 2058 4 0 1280 multi-exon FALSE canonical 48 1053 110 6635.90762443 10 0 0 FALSE 0 0 NA C coding 204 612 121 732 25 PB.10294.1 chr17 - 3258 1 genic_intron novelGene_1136 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 45 PB.3085.1 chr4 + 3276 2 intergenic novelGene_1880 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 23 NA 3 3 0 FALSE 0 0 NA A coding 115 345 2932 3276 90 PB.10885.1 chr19 - 4102 4 full-splice_match ZNF792 rna58717 4070 4 -217 185 multi-exon FALSE canonical 14 20 638 45.2106182218 3 3 0 FALSE 0 0 NA A coding 634 1902 606 2507 0 PB.829.1 chr1 - 3766 6 novel_not_in_catalog CD48 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 2852 1647.83585348 2 5 0 TRUE 0 0 NA C coding 240 720 40 759 30 PB.4300.1 chr6 + 2588 1 genic_intron novelGene_2419 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A coding 100 300 1426 1725 85 PB.829.3 chr1 - 1128 4 full-splice_match CD48 rna4543 1104 4 -27 3 multi-exon FALSE canonical 42 1406 182 1073.99767225 2 0 0 FALSE 0 0 NA C coding 208 624 197 820 25 PB.829.2 chr1 - 3798 6 novel_not_in_catalog CD48 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2888 1650.72468934 3 5 0 TRUE 0 0 NA C coding 208 624 172 795 35 PB.829.5 chr1 - 1099 4 full-splice_match CD48 rna4542 1128 4 21 8 multi-exon FALSE canonical 40 1483 158 1038.0587652 2 0 0 FALSE 0 0 NA C coding 240 720 77 796 30 PB.829.4 chr1 - 3174 3 novel_in_catalog CD48 novel NA NA NA NA combination_of_known_junctions FALSE canonical 42 1406 182 1037.49987952 10 0 0 FALSE 0 0 NA C coding 262 786 197 982 35 PB.1474.1 chr2 - 2756 1 novel_in_catalog PTPRG novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.829.9 chr1 - 2832 2 novel_in_catalog CD48 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 36 254 143 NA 4 1 0 FALSE 0 0 NA C non_coding NA NA NA NA 35 PB.5758.1 chr9 - 3794 13 novel_not_in_catalog RASGEF1A novel NA NA NA NA any annotated donor/acceptor FALSE canonical 4 5 662 91.4658406182 2 10 0 FALSE 0 0 NA A coding 481 1443 669 2111 5 PB.3279.1 chr4 - 1495 1 genic_intron novelGene_2457 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8760.1 chr14 + 2636 1 antisense novelGene_CTSC_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A coding 108 324 1134 1457 75 PB.7949.2 chr13 - 2794 3 full-splice_match CYP1B1 rna43123 5059 3 -7 2272 multi-exon FALSE canonical 11 54 371 68 12 0 0 FALSE 0 0 NA C coding 542 1626 373 1998 85 PB.3765.2 chr5 - 3041 1 novel_in_catalog C5H4orf27 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA B non_coding NA NA NA NA 55 PB.12088.1 chrX + 3265 1 genic_intron novelGene_2177 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA B coding 9 27 290 316 80 PB.7497.1 chr12 + 3159 26 incomplete-splice_match RIF1 rna40378 8360 36 2 5199 3prime_fragment FALSE canonical 32 70 117 223.42560283 2 7 0 FALSE 0 0 NA A coding 1010 3030 128 3157 75 PB.5269.1 chr8 + 3325 11 full-splice_match ESCO2 rna28630 3489 11 160 4 multi-exon FALSE canonical 12 104 53 96.1769203084 6 11 0 FALSE 0 0 NA A coding 600 1800 66 1865 40 PB.5172.462 chr7 + 1594 10 fusion LOC708891_LOC721089 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 365 3554.59533562 2 14 0 TRUE 0 0 NA B coding 363 1089 379 1467 15 PB.265.1 chr1 - 971 6 full-splice_match TMEM54 rna1353 1078 6 99 8 multi-exon FALSE canonical 5 7 114 24.7386337537 2 5 0 FALSE 0 0 NA A coding 222 666 99 764 15 PB.8491.1 chr14 + 2822 1 genic_intron novelGene_420 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 14 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.823.5 chr1 - 2621 8 novel_not_in_catalog SLAMF6 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 3 592 55.641710973 3 0 0 FALSE 0 0 NA C coding 291 873 70 942 65 PB.5172.463 chr7 + 1503 10 fusion LOC720839_LOC721089 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 184 2697.40745902 2 7 0 TRUE 0 0 NA B coding 131 393 77 469 20 PB.7969.1 chr13 - 1802 1 incomplete-splice_match ZFP36L2 rna43249 3730 2 1914 15 mono-exon FALSE canonical NA NA NA NA 10 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 45 PB.459.1 chr1 + 4344 13 full-splice_match MIER1 rna2494 4777 13 70 363 multi-exon FALSE canonical 46 394 83 359.855526566 2 2 0 FALSE 0 0 NA C coding 512 1536 75 1610 35 PB.7210.4 chr11 + 3456 32 incomplete-splice_match KIAA1033 rna39130 5804 33 57 2291 3prime_fragment FALSE canonical 48 735 2782 327.527098116 11 2 0 FALSE 0 0 NA C coding 1144 3432 25 3456 65 PB.7210.3 chr11 + 3092 29 novel_not_in_catalog KIAA1033 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 2845 395.25434849 2 4 0 TRUE 0 0 NA C coding 922 2766 73 2838 70 PB.7210.2 chr11 + 5737 33 full-splice_match KIAA1033 rna39130 5804 33 57 10 multi-exon FALSE canonical 48 735 2782 329.161054804 14 6 0 FALSE 0 0 NA C coding 1173 3519 25 3543 20 PB.7210.1 chr11 + 3123 30 incomplete-splice_match KIAA1033 rna39130 5804 33 51 2630 3prime_fragment FALSE canonical 48 735 2788 323.165592228 29 0 0 FALSE 0 0 NA C coding 1031 3093 31 3123 75 PB.10238.14 chr17 - 2514 9 novel_in_catalog KIAA0226L novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 142 111 219.282922272 2 6 0 FALSE 0 0 NA C coding 448 1344 237 1580 85 PB.7401.2 chr12 + 2789 15 novel_not_in_catalog ERCC3 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2017 245.140775882 2 7 0 TRUE 0 0 NA C coding 700 2100 68 2167 30 PB.7401.1 chr12 + 2723 15 full-splice_match ERCC3 rna40044 2617 15 -35 -71 multi-exon FALSE canonical 40 361 1090 179.658008449 106 1 0 FALSE 0 0 NA C coding 782 2346 64 2409 25 PB.7350.1 chr11 - 5670 24 novel_in_catalog CLIP1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 14 21 3276 812.28689513 2 18 0 FALSE 0 0 NA B coding 1355 4065 166 4230 5 PB.10238.10 chr17 - 2761 15 full-splice_match KIAA0226L rna55265 3306 15 106 439 multi-exon FALSE canonical 26 106 2219 273.065926106 2 6 0 FALSE 0 0 NA C coding 677 2031 259 2289 15 PB.10238.11 chr17 - 1736 11 novel_not_in_catalog KIAA0226L novel NA NA NA NA any annotated donor/acceptor FALSE canonical 7 8 145 250.629208194 5 0 0 FALSE 0 0 NA C coding 308 924 382 1305 15 PB.10238.12 chr17 - 2504 9 novel_in_catalog KIAA0226L novel NA NA NA NA combination_of_known_junctions FALSE canonical 37 409 103 147.610975202 5 8 0 FALSE 0 0 NA C coding 448 1344 229 1572 80 PB.7401.4 chr12 + 2823 16 novel_not_in_catalog ERCC3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 7 9 1497 279.08421668 2 8 0 FALSE 0 0 NA C coding 448 1344 58 1401 30 PB.9610.1 chr16 + 2663 1 novel_in_catalog DHRS7B novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.9604.4 chr16 + 3497 11 novel_not_in_catalog ALDH3A2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 51 711.17649005 2 1 0 TRUE 0 0 NA C coding 485 1455 70 1524 25 PB.9610.2 chr16 + 3986 7 full-splice_match DHRS7B rna52219 1379 7 -11 -2596 multi-exon FALSE canonical 32 82 55 126.107097342 5 1 0 FALSE 0 0 NA C coding 310 930 81 1010 30 PB.8606.2 chr14 + 1660 13 incomplete-splice_match COPB1 rna46678 3400 22 33 1707 3prime_fragment FALSE canonical 48 837 133 516.982591583 2 1 0 FALSE 0 0 NA C coding 490 1470 191 1660 60 PB.5172.467 chr7 + 1587 9 fusion LOC708891_LOC721089 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 363 3611.79539841 5 7 0 TRUE 0 0 NA B coding 196 588 866 1453 15 PB.1692.13 chr2 - 3016 19 incomplete-splice_match LOC704923 rna9033 4883 32 125 1742 internal_fragment FALSE canonical 30 95 2228 774.176336502 4 12 2 FALSE 0 0 NA B coding 916 2748 267 3014 55 PB.4083.1 chr6 + 1651 1 intergenic novelGene_1932 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 13 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11409.14 chr20 + 2664 1 novel_in_catalog PRKCB novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 12 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.4249.1 chr6 + 5273 20 full-splice_match HMGXB3 rna23008 5476 20 184 19 multi-exon FALSE canonical 30 138 454 144.837840359 2 6 0 FALSE 0 0 NA C coding 1292 3876 457 4332 25 PB.4249.2 chr6 + 3522 1 novel_in_catalog HMGXB3 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.835.1 chr1 - 1659 6 full-splice_match DEDD rna4567 2160 6 -87 588 multi-exon FALSE canonical 21 48 117 114.47707194 10 2 0 FALSE 0 0 NA A coding 318 954 215 1168 50 PB.10974.1 chr19 + 2821 15 full-splice_match HNRNPUL1 rna59301 3591 15 181 589 multi-exon FALSE canonical 28 94 67 598.195620178 2 0 0 FALSE 0 0 NA C coding 766 2298 73 2370 70 PB.8320.1 chr14 + 2902 1 antisense novelGene_AIP_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A coding 138 414 1726 2139 90 PB.8487.2 chr14 + 3723 8 novel_not_in_catalog TNKS1BP1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 13 27 227 156.674822483 7 0 0 FALSE 0 0 NA C coding 1053 3159 102 3260 5 PB.9511.2 chr16 - 2967 15 full-splice_match DVL2 rna51687 3400 15 432 1 multi-exon FALSE canonical 26 71 756 190.682982985 20 0 0 FALSE 0 0 NA C coding 736 2208 237 2444 5 PB.9511.1 chr16 - 2984 15 novel_in_catalog DVL2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 26 70 774 190.795702258 9 1 0 FALSE 0 0 NA C coding 732 2196 267 2462 5 PB.75.2 chr1 - 2913 24 novel_in_catalog EXOSC10 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 449 135 143.586211037 5 2 0 FALSE 0 0 NA C coding 623 1869 25 1893 40 PB.5570.2 chr8 - 3021 16 full-splice_match NDRG1 rna30066 3343 16 317 5 multi-exon FALSE canonical 47 561 1080 707.115266417 54 0 0 FALSE 0 0 NA A coding 394 1182 138 1319 5 PB.9970.1 chr16 - 1419 1 incomplete-splice_match HELZ rna54047 13775 32 6478 5879 mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 70 PB.3217.3 chr4 - 2157 4 full-splice_match RNF146 rna17464 2766 4 382 227 multi-exon FALSE canonical 44 224 211 51.1859355683 2 2 0 FALSE 0 0 NA C coding 359 1077 417 1493 40 PB.8598.1 chr14 - 1781 15 full-splice_match NUCB2 rna46625 2150 15 28 341 multi-exon FALSE canonical 37 287 84 695.286271977 8 3 0 FALSE 0 0 NA C coding 420 1260 417 1676 50 PB.6294.2 chr10 + 2970 19 full-splice_match TRPC4AP rna34297 3182 19 193 19 multi-exon FALSE canonical 43 416 60 525.617731817 105 0 0 FALSE 0 0 NA C coding 691 2073 211 2283 45 PB.6294.3 chr10 + 2646 2 novel_in_catalog TRPC4AP novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 416 194 NA 2 3 0 FALSE 0 0 NA C coding 162 486 27 512 55 PB.6294.4 chr10 + 3095 19 full-splice_match TRPC4AP rna34298 3158 19 60 3 multi-exon FALSE canonical 43 295 1076 586.106645586 11 2 0 FALSE 0 0 NA C coding 789 2367 26 2392 25 PB.6294.5 chr10 + 2931 18 full-splice_match TRPC4AP rna34299 2996 18 60 5 multi-exon FALSE canonical 43 155 890 619.497376911 4 1 0 FALSE 0 0 NA C coding 735 2205 26 2230 25 PB.6294.6 chr10 + 2976 18 novel_in_catalog TRPC4AP novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 17 28 322 694.202420048 2 3 0 FALSE 0 0 NA C coding 750 2250 26 2275 25 PB.6294.7 chr10 + 3095 19 novel_not_in_catalog TRPC4AP novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1069 625.980830377 2 1 0 FALSE 0 0 NA C coding 416 1248 1145 2392 25 PB.5783.1 chr9 - 2932 1 genic_intron novelGene_950 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.4261.2 chr6 - 2792 18 full-splice_match TNIP1 rna23070 2918 18 116 10 multi-exon FALSE canonical 35 159 89 320.512090256 3 3 1 FALSE 0 0 NA C coding 637 1911 126 2036 35 PB.1343.1 chr2 - 1668 8 full-splice_match HSPBAP1 rna7181 2040 8 23 349 multi-exon FALSE canonical 41 162 367 64.3506021728 5 2 0 FALSE 0 0 NA A coding 488 1464 118 1581 30 PB.4040.1 chr6 - 3523 12 full-splice_match ELL2 rna21961 6223 12 416 2284 multi-exon FALSE canonical 38 513 463 78.9240140895 24 0 0 FALSE 0 0 NA C coding 640 1920 147 2066 60 PB.7985.1 chr13 + 3979 2 genic SOCS5 novel NA NA NA NA no_subcategory FALSE canonical 19 91 203 NA 2 10 0 FALSE 0 0 NA A coding 530 1590 234 1823 45 PB.7842.1 chr13 + 1616 10 incomplete-splice_match RRM2 rna42517 3213 11 169 1428 internal_fragment FALSE canonical 21 92 136 264.815029785 16 0 0 FALSE 0 0 NA A coding 389 1167 38 1204 45 PB.9442.1 chr16 - 2728 12 full-splice_match INPP5K rna51351 2615 12 -56 -57 multi-exon FALSE canonical 34 174 224 192.670703533 130 1 0 FALSE 0 0 NA A coding 448 1344 181 1524 15 PB.5546.2 chr8 + 3026 6 novel_in_catalog SQLE novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 471 1715 122.715117243 2 7 0 FALSE 0 0 NA C coding 372 1116 894 2009 50 PB.5546.1 chr8 + 2844 11 full-splice_match SQLE rna29986 2180 11 -676 12 multi-exon TRUE canonical 40 471 1614 133.210359957 95 3 0 FALSE 0 0 NA C coding 574 1722 793 2514 25 PB.8372.1 chr14 - 2524 1 genic_intron novelGene_201 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 9 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.3715.1 chr5 - 2874 12 full-splice_match PRMT9 rna20205 3518 12 47 597 multi-exon FALSE canonical 41 267 380 76.3871716979 29 0 0 FALSE 0 0 NA A coding 845 2535 192 2726 50 PB.3193.2 chr4 + 2362 12 full-splice_match SGK1 rna17329 2455 12 86 7 multi-exon FALSE canonical 44 616 1090 278.032372216 7 4 0 FALSE 0 0 NA C coding 431 1293 53 1345 30 PB.855.1 chr1 - 2757 1 genic_intron novelGene_2255 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.10726.4 chr19 - 1507 7 full-splice_match ACP5 rna57917 1595 7 83 5 multi-exon FALSE canonical 12 13 57 518.318434941 6 5 0 FALSE 0 0 NA C coding 325 975 217 1191 20 PB.5572.1 chr8 - 3143 1 incomplete-splice_match ST3GAL1 rna30070 7052 10 3903 7 mono-exon FALSE canonical NA NA NA NA 8 11 NA FALSE 0 0 NA B non_coding NA NA NA NA 5 PB.10054.2 chr16 - 1876 3 full-splice_match SRSF2 rna54392 1971 3 78 17 multi-exon FALSE canonical 20 30 535 1033 21 1 0 FALSE 0 0 NA C coding 209 627 210 836 25 PB.10726.3 chr19 - 1479 6 full-splice_match ACP5 rna57916 1523 6 38 6 multi-exon FALSE canonical 13 38 102 479.98229134 7 8 1 FALSE 0 0 NA C coding 325 975 190 1164 20 PB.10054.1 chr16 - 1312 1 incomplete-splice_match SRSF2 rna54395 2684 3 1368 5 mono-exon FALSE canonical NA NA NA NA 6 0 NA FALSE 0 0 NA C coding 110 330 146 475 20 PB.2880.4 chr4 + 2971 4 novel_in_catalog ZNF76 novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 99 127 174.068951855 2 0 0 FALSE 0 0 NA C coding 119 357 1558 1914 85 PB.370.2 chr1 + 2081 13 novel_in_catalog NASP novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 209 1242 564.20297766 5 1 0 FALSE 0 0 NA C coding 406 1218 103 1320 20 PB.5313.1 chr8 - 2667 22 full-splice_match HOOK3 rna28888 5008 22 59 2282 multi-exon FALSE canonical 46 518 239 406.732098561 21 0 0 FALSE 0 0 NA C coding 718 2154 183 2336 50 PB.2880.1 chr4 + 2685 14 novel_not_in_catalog ZNF76 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 2 1741 165.933721708 2 2 0 FALSE 0 0 NA C coding 560 1680 278 1957 10 PB.2880.3 chr4 + 2634 14 full-splice_match ZNF76 rna15754 2835 14 200 1 multi-exon FALSE canonical 34 99 99 135.539662092 20 3 0 FALSE 0 0 NA C coding 570 1710 196 1905 10 PB.2880.2 chr4 + 2693 14 full-splice_match ZNF76 rna15752 2789 14 94 2 multi-exon FALSE canonical 27 58 159 141.294019689 4 1 0 FALSE 0 0 NA C coding 570 1710 256 1965 10 PB.63.1 chr1 + 1427 3 full-splice_match SPSB1 rna340 2184 3 -107 864 multi-exon FALSE canonical 16 25 170 2.44948974278 5 2 0 FALSE 0 0 NA A coding 273 819 319 1137 20 PB.10956.1 chr19 - 599 4 full-splice_match LOC699418 rna59185 722 4 120 3 multi-exon FALSE canonical 24 1484 138 266.998127334 2 0 0 FALSE 0 0 NA A coding 139 417 47 463 20 PB.1721.1 chr2 - 2760 1 genic_intron novelGene_1980 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.3558.4 chr5 + 3772 1 genic_intron novelGene_1610 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.141.1 chr1 - 2664 1 genic_intron novelGene_450 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.7272.1 chr11 - 919 7 full-splice_match RPL6 rna39397 970 7 47 4 multi-exon FALSE canonical 45 4084 19 9017.9837547 4 1 0 FALSE 0 0 NA A coding 288 864 20 883 5 PB.6003.1 chr9 + 1614 1 full-splice_match HPS6 rna32741 2621 1 1004 3 mono-exon FALSE canonical NA NA NA NA 5 13 NA FALSE 0 0 NA A coding 439 1317 84 1400 20 PB.1064.3 chr1 - 5683 4 novel_in_catalog TOR3A novel NA NA NA NA combination_of_known_junctions FALSE canonical 28 76 349 122.894263495 3 9 0 FALSE 0 0 NA C coding 294 882 76 957 90 PB.7350.5 chr11 - 3070 14 novel_in_catalog CLIP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 419 111 717.517247179 12 6 0 FALSE 0 0 NA B coding 951 2853 218 3070 60 PB.11681.1 chr20 + 5759 1 genic_intron novelGene_1326 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 19 NA FALSE 0 0 NA A coding 125 375 1811 2185 75 PB.3976.1 chr6 - 1746 9 full-splice_match ANKRA2 rna21627 1274 9 -54 -418 multi-exon FALSE canonical 45 294 251 87.0459648691 2 0 0 FALSE 0 0 NA A coding 313 939 356 1294 25 PB.11195.3 chr19 + 2796 7 full-splice_match ZSCAN18 rna60649 2936 7 107 33 multi-exon FALSE canonical 33 122 71 407.752375836 2 4 0 FALSE 0 0 NA C coding 601 1803 185 1987 50 PB.622.4 chr1 + 3261 20 full-splice_match MOV10 rna3371 3435 20 160 14 multi-exon FALSE canonical 30 102 1166 96.9742233792 31 0 0 FALSE 0 0 NA C coding 1003 3009 27 3035 40 PB.3058.2 chr4 - 3121 1 genic_intron novelGene_1670 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 8 12 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.785.4 chr1 - 1919 14 novel_not_in_catalog CCT3 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 256 1839.7673766 2 9 0 TRUE 0 0 NA C coding 466 1398 295 1692 30 PB.7010.1 chr11 + 3234 5 novel_in_catalog RAB5B novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 1502 255 185.989247001 126 0 0 FALSE 0 0 NA A coding 215 645 93 737 30 PB.2216.4 chr3 - 2839 2 novel_not_in_catalog IKZF1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 3 4 207 NA 3 3 0 FALSE 0 0 NA B coding 265 795 120 914 65 PB.943.15 chr1 + 1566 1 incomplete-splice_match PIGR rna5161 4257 11 2688 4 mono-exon FALSE canonical NA NA NA NA 4 4 NA FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.7104.3 chr11 + 2500 9 novel_in_catalog CCT2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 2713 1528 827.872574736 2 1 0 FALSE 0 0 NA C coding 292 876 1380 2255 10 PB.7104.2 chr11 + 2580 15 novel_in_catalog CCT2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 42 2713 1610 842.854079898 5 0 0 FALSE 0 0 NA C coding 474 1422 916 2337 20 PB.7104.1 chr11 + 1924 16 full-splice_match CCT2 rna38552 1915 16 -12 3 multi-exon TRUE canonical 42 2713 957 863.053880126 31 0 0 FALSE 0 0 NA C coding 535 1605 80 1684 30 PB.3775.2 chr5 + 4417 6 novel_not_in_catalog SPCS3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 8 10 3387 1079.40863439 2 12 0 TRUE 0 0 NA C coding 162 486 158 643 20 PB.10435.1 chr18 - 901 5 full-splice_match INO80C rna56406 895 5 23 -29 multi-exon FALSE canonical 47 279 211 194.002577302 3 7 0 FALSE 0 0 NA C coding 192 576 56 631 20 PB.11195.2 chr19 + 2855 7 full-splice_match ZSCAN18 rna60650 2924 7 36 33 multi-exon FALSE canonical 33 141 1081 398.377961238 2 9 0 FALSE 0 0 NA C coding 601 1803 244 2046 50 PB.10435.2 chr18 - 1351 1 novel_in_catalog INO80C novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA C coding 90 270 56 325 90 PB.972.4 chr1 - 5863 12 incomplete-splice_match ATP2B4 rna5365 8554 22 2309 382 5prime_fragment FALSE canonical 46 526 1774 272.835115042 2 5 0 FALSE 0 0 NA B coding 631 1893 188 2080 80 PB.972.5 chr1 - 2801 1 genic_intron novelGene_2474 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.1011.27 chr1 - 2986 27 incomplete-splice_match PTPRC rna5561 5233 33 119 2128 internal_fragment FALSE canonical 28 192 528 1702.79711064 57 0 0 FALSE 0 0 NA C coding 965 2895 90 2984 55 PB.2177.2 chr3 + 5681 27 novel_not_in_catalog GTF2I novel NA NA NA NA any annotated donor/acceptor FALSE canonical 18 39 1092 881.406262742 4 4 0 FALSE 0 0 NA B coding 344 1032 63 1094 80 PB.2177.3 chr3 + 1360 1 novel_in_catalog GTF2I novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 5 0 NA FALSE 0 0 NA B non_coding NA NA NA NA 20 PB.972.2 chr1 - 3541 2 novel_not_in_catalog ATP2B4 novel NA NA NA NA not any annotated donor/acceptor FALSE canonical 0 0 982 NA 2 1 0 TRUE 0 0 NA B non_coding NA NA NA NA 15 PB.2177.1 chr3 + 4264 28 novel_in_catalog GTF2I novel NA NA NA NA combination_of_known_junctions FALSE canonical 37 291 350 657.006088252 2 19 0 FALSE 0 0 NA B coding 901 2703 356 3058 85 PB.11434.6 chr20 - 2215 14 novel_in_catalog CD19 novel NA NA NA NA combination_of_known_junctions FALSE canonical 20 111 1423 67 4 7 0 FALSE 0 0 NA C coding 392 1176 832 2007 25 PB.11434.4 chr20 - 1741 16 novel_not_in_catalog CD19 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 702 117.234807118 2 14 0 TRUE 0 0 NA C coding 229 687 31 717 25 PB.11434.3 chr20 - 2536 13 novel_in_catalog CD19 novel NA NA NA NA combination_of_known_junctions FALSE canonical 20 111 1744 68.3885955405 5 5 0 FALSE 0 0 NA C coding 162 486 31 516 25 PB.8407.2 chr14 - 4178 31 full-splice_match PLCB3 rna45410 4216 31 31 7 multi-exon FALSE canonical 8 13 3161 122.020490083 27 1 0 FALSE 0 0 NA A coding 1234 3702 127 3828 15 PB.4999.1 chr7 - 1490 2 full-splice_match ZFP36L1 rna26952 3173 2 145 1538 multi-exon FALSE canonical 46 292 186 NA 256 3 0 FALSE 0 0 NA C coding 338 1014 130 1143 50 PB.6977.1 chr11 + 1668 2 full-splice_match MFSD5 rna37980 1682 2 12 2 multi-exon FALSE canonical 25 39 80 NA 22 3 0 FALSE 0 0 NA C coding 450 1350 98 1447 25 PB.7720.1 chr12 + 4643 5 full-splice_match SGPP2 rna41805 1462 5 34 -3215 multi-exon FALSE canonical 9 30 280 34.1760149813 5 3 0 FALSE 0 0 NA A coding 399 1197 62 1258 10 PB.9923.1 chr16 - 4165 13 full-splice_match APPBP2 rna53859 5158 13 -83 1076 multi-exon FALSE canonical 42 391 536 340.702216019 3 2 0 FALSE 0 0 NA A coding 585 1755 310 2064 25 PB.9028.1 chr15 - 2802 1 genic_intron novelGene_185 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 11 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.4999.3 chr7 - 1318 1 incomplete-splice_match ZFP36L1 rna26952 3173 2 867 989 mono-exon FALSE canonical NA NA NA NA 8 1 NA FALSE 0 0 NA C coding 73 219 204 422 80 PB.9974.4 chr16 - 2632 1 genic_intron novelGene_1235 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5393.2 chr8 + 2739 1 novel_in_catalog TERF1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 9 2 NA FALSE 0 0 NA C coding 148 444 24 467 75 PB.11519.5 chr20 - 3319 1 genic_intron novelGene_823 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 18 NA FALSE 0 0 NA B non_coding NA NA NA NA 80 PB.8037.1 chr13 + 2727 2 full-splice_match B3GNT2 rna43580 1872 2 2 -857 multi-exon FALSE canonical 35 254 215 NA 33 1 0 FALSE 0 0 NA A coding 382 1146 270 1415 20 PB.7244.3 chr11 - 5658 18 full-splice_match GIT2 rna39277 2633 18 107 -3132 multi-exon FALSE canonical 29 175 1614 581.489466801 2 4 0 FALSE 0 0 NA C coding 679 2037 124 2160 30 PB.7244.4 chr11 - 2752 20 full-splice_match GIT2 rna39267 3345 20 -2 595 multi-exon FALSE canonical 38 167 1754 573.88936216 10 0 0 FALSE 0 0 NA C coding 759 2277 114 2390 40 PB.7860.1 chr13 - 1410 7 full-splice_match LAPTM4A rna42643 1282 7 -6 -122 multi-exon FALSE canonical 48 5813 269 1624.05603352 68 0 0 FALSE 0 0 NA A coding 233 699 159 857 15 PB.11391.1 chr20 + 1627 5 full-splice_match TMEM159 rna61680 1994 5 351 16 multi-exon FALSE canonical 34 249 15 266.966290007 17 1 0 FALSE 0 0 NA A coding 161 483 114 596 25 PB.7244.7 chr11 - 3442 19 novel_in_catalog GIT2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 38 167 1596 589.91524815 2 1 0 FALSE 0 0 NA C coding 709 2127 106 2232 80 PB.7244.8 chr11 - 2474 1 novel_in_catalog GIT2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 16 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.7244.9 chr11 - 2281 15 full-splice_match GIT2 rna39285 2335 15 47 7 multi-exon FALSE canonical 42 432 1506 471.170881953 8 1 0 FALSE 0 0 NA C coding 471 1413 115 1527 20 PB.6545.2 chr10 - 1710 10 novel_not_in_catalog RTCB novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 26 558.452325629 2 0 0 FALSE 0 0 NA C coding 431 1293 9 1301 5 PB.4386.2 chr6 + 3385 5 novel_in_catalog TRIM41 novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 140 1426 182.600657173 2 13 0 FALSE 0 0 NA C coding 390 1170 305 1474 5 PB.4386.3 chr6 + 2822 7 full-splice_match TRIM41 rna23694 3323 7 897 -396 multi-exon FALSE canonical 32 117 2391 177.510563066 2 9 0 FALSE 0 0 NA C coding 624 1872 295 2166 5 PB.4386.1 chr6 + 3188 6 full-splice_match TRIM41 rna23693 4077 6 887 2 multi-exon FALSE canonical 32 140 1426 178.488094841 3 6 0 FALSE 0 0 NA C coding 624 1872 305 2176 5 PB.4713.30 chr7 + 6315 12 novel_not_in_catalog AKAP13 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2655 665.371324901 2 6 0 TRUE 0 0 NA B coding 512 1536 159 1694 10 PB.11158.1 chr19 + 2816 6 novel_not_in_catalog LOC720214 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2573 123.773987574 2 11 0 TRUE 0 0 NA A coding 799 2397 205 2601 15 PB.8417.1 chr14 + 860 5 full-splice_match PLA2G16 rna45486 820 5 -43 3 multi-exon FALSE canonical 46 684 152 376.216692878 2 3 0 FALSE 0 0 NA A coding 162 486 207 692 30 PB.5172.430 chr7 + 1557 8 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 373 3623.1896169 2 11 0 TRUE 0 0 NA B coding 196 588 842 1429 15 PB.4713.35 chr7 + 5522 3 novel_in_catalog AKAP13 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 1055 787 65.4980915753 4 2 0 FALSE 0 0 NA B coding 119 357 478 834 5 PB.4713.36 chr7 + 2425 1 incomplete-splice_match AKAP13 rna25504 9749 29 7291 34 mono-exon FALSE canonical NA NA NA NA 19 0 NA FALSE 0 0 NA B coding 140 420 2 421 75 PB.5684.1 chr9 + 1533 10 full-splice_match PRPF18 rna30719 1394 10 -35 -104 multi-exon FALSE canonical 47 895 920 153.101273672 8 1 0 FALSE 0 0 NA A coding 342 1026 129 1154 25 PB.7651.1 chr12 - 3896 1 genic_intron novelGene_1647 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.3612.1 chr5 - 861 5 full-splice_match H2AFZ rna19516 820 5 -49 8 multi-exon FALSE canonical 48 5433 300 1160.06982548 8 0 0 FALSE 0 0 NA A coding 128 384 106 489 35 PB.734.1 chr1 - 1619 14 full-splice_match ILF2 rna4014 1550 14 -3 -66 multi-exon FALSE canonical 45 751 96 763.540437698 112 0 0 FALSE 0 0 NA A coding 390 1170 92 1261 10 PB.1703.1 chr2 + 2771 7 full-splice_match KLHL6 rna9099 2560 7 147 -358 multi-exon FALSE canonical 26 92 1564 90.7469007735 48 1 0 FALSE 0 0 NA A coding 610 1830 34 1863 5 PB.4020.1 chr6 - 2973 10 novel_in_catalog CCNH novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 301 2754 870.86508714 8 1 0 FALSE 0 0 NA A coding 323 969 82 1050 40 PB.5497.1 chr8 + 2709 1 novel_in_catalog EBAG9 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 6 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.7754.1 chr12 - 2591 14 full-splice_match NCL rna41989 2813 14 71 151 multi-exon FALSE canonical 47 1094 2234 935.901169996 292 0 0 FALSE 0 0 NA A coding 711 2133 176 2308 25 PB.4697.2 chr7 - 3665 21 novel_not_in_catalog EFTUD1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 2 1777 287.419553962 2 8 0 FALSE 0 0 NA C coding 1138 3414 113 3526 45 PB.5026.1 chr7 + 2878 11 novel_in_catalog BBOF1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 25 96 185 265.292291633 2 7 0 FALSE 0 0 NA A coding 389 1167 321 1487 25 PB.10060.1 chr16 - 3515 1 full-splice_match LOC106994148 gene26316 1402 1 94 -2207 mono-exon FALSE canonical NA NA NA NA 8 0 NA FALSE 0 0 NA A coding 147 441 1227 1667 80 PB.3099.1 chr4 - 2040 18 novel_not_in_catalog SNX9 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 16 28 191 315.871809442 6 12 0 FALSE 0 0 NA B coding 595 1785 180 1964 45 PB.6431.1 chr10 - 3119 2 full-splice_match NANP rna35039 1128 2 -10 -1981 multi-exon FALSE canonical 42 253 135 NA 25 1 0 FALSE 0 0 NA A coding 248 744 46 789 30 PB.9266.2 chr15 + 1555 9 full-splice_match ARHGEF39 rna50259 1623 9 63 5 multi-exon FALSE canonical 7 10 153 33.1511689085 5 0 0 FALSE 0 0 NA A coding 334 1002 16 1017 25 PB.11167.4 chr19 + 1536 5 novel_not_in_catalog RPS9 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 40 106 457 5559.69405633 2 0 0 FALSE 0 0 NA C coding 139 417 51 467 15 PB.11399.1 chr20 + 3071 1 antisense novelGene_COG7_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A coding 119 357 1813 2169 90 PB.8784.3 chr14 + 3857 1 novel_in_catalog BIRC3 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 14 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.2670.1 chr3 + 2834 1 incomplete-splice_match RBM33 rna14374 10261 18 7425 3 mono-exon FALSE canonical NA NA NA NA 4 8 NA FALSE 0 0 NA B non_coding NA NA NA NA 10 PB.3099.3 chr4 - 3040 1 genic_intron novelGene_1907 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.8870.3 chr14 - 2578 9 novel_in_catalog SLC37A4 novel NA NA NA NA combination_of_known_junctions FALSE canonical 15 36 541 394.936703789 5 3 0 FALSE 0 0 NA B coding 429 1287 737 2023 30 PB.6790.1 chr11 + 1834 4 full-splice_match GABARAPL1 rna36938 1823 4 -22 11 multi-exon FALSE canonical 48 4776 306 1925.86603895 8 0 0 FALSE 0 0 NA A coding 117 351 217 567 40 PB.11167.2 chr19 + 1628 4 novel_in_catalog RPS9 novel NA NA NA NA combination_of_known_junctions FALSE canonical 42 6318 30 4274.47002563 6 1 0 FALSE 0 0 NA C coding 139 417 56 472 15 PB.7726.1 chr12 - 3240 2 full-splice_match FAM124B rna41823 4475 2 51 1184 multi-exon FALSE canonical 17 32 1012 NA 2 3 0 FALSE 0 0 NA A coding 455 1365 281 1645 80 PB.1135.1 chr1 - 2807 5 incomplete-splice_match RGS4 rna6216 1554 6 527 -1780 5prime_fragment FALSE canonical 21 1483 272 302.10428663 2 9 0 FALSE 0 0 NA A coding 205 615 124 738 25 PB.8870.1 chr14 - 3162 8 novel_not_in_catalog SLC37A4 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1470 393.347174898 9 2 0 TRUE 0 0 NA B coding 356 1068 1537 2604 30 PB.7306.2 chr11 + 2391 7 full-splice_match PRKAB1 rna39518 2360 7 9 -40 multi-exon FALSE canonical 44 303 947 70.0856618717 9 0 0 FALSE 0 0 NA C coding 270 810 282 1091 20 PB.1203.1 chr1 - 3228 1 genic_intron novelGene_2654 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 80 PB.11167.1 chr19 + 880 6 novel_not_in_catalog RPS9 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 40 106 463 5726.53385566 2 1 0 FALSE 0 0 NA C coding 139 417 57 473 15 PB.5585.1 chr8 + 7406 22 novel_in_catalog DENND3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 29 150 1491 109.375499999 3 4 0 FALSE 0 0 NA C coding 1107 3321 320 3640 30 PB.1376.1 chr2 - 1329 3 full-splice_match RAB43 rna7358 4465 3 249 2887 multi-exon FALSE canonical 45 352 285 80.49844719 16 1 0 FALSE 0 0 NA C coding 212 636 82 717 10 PB.8465.4 chr14 - 2773 7 novel_not_in_catalog MS4A1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 4 9 89 689.243063077 7 2 0 FALSE 0 0 NA C coding 297 891 280 1170 40 PB.9209.1 chr15 - 3141 1 genic_intron novelGene_865 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 11 NA FALSE 0 0 NA A coding 108 324 1931 2254 90 PB.796.3 chr1 - 3573 6 novel_in_catalog FCRL5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 3 3 1725 64.9384323802 2 8 0 FALSE 0 0 NA A coding 101 303 1991 2293 25 PB.8465.1 chr14 - 1289 1 incomplete-splice_match MS4A1 rna45688 3354 7 1362 704 mono-exon FALSE canonical NA NA NA NA 8 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 40 PB.803.8 chr1 + 3374 4 novel_in_catalog MNDA novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 4436 193 1075.65793819 2 3 0 FALSE 0 0 NA C coding 182 546 2240 2785 70 PB.8465.3 chr14 - 2614 7 novel_not_in_catalog MS4A1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 459 693.331810896 393 7 1 TRUE 0 0 NA C coding 181 543 468 1010 40 PB.7025.1 chr11 - 6360 31 full-splice_match BAZ2A rna38256 6761 31 388 13 multi-exon FALSE canonical 25 58 202 196.987309236 2 3 0 FALSE 0 0 NA C coding 1907 5721 391 6111 55 PB.2216.1 chr3 - 1811 1 incomplete-splice_match IKZF1 rna11875 7324 8 2196 3318 mono-exon FALSE canonical NA NA NA NA 20 0 NA FALSE 0 0 NA B non_coding NA NA NA NA 70 PB.1376.3 chr2 - 5837 1 genic_intron novelGene_1029 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A coding 119 357 2507 2863 90 PB.8465.8 chr14 - 2559 7 novel_not_in_catalog MS4A1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 13 23 224 698.07735961 2 2 0 FALSE 0 0 NA C coding 281 843 114 956 40 PB.8465.9 chr14 - 2581 7 full-splice_match MS4A1 rna45688 3354 7 68 705 multi-exon FALSE canonical 26 223 699 643.257335753 4 2 0 FALSE 0 0 NA C coding 284 852 127 978 40 PB.903.1 chr1 - 1727 1 antisense novelGene_SLC30A10_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.4887.1 chr7 + 1443 4 full-splice_match LRR1 rna26487 2503 4 1057 3 multi-exon FALSE canonical 28 418 311 20.7123151772 2 1 0 FALSE 0 0 NA A coding 414 1242 30 1271 15 PB.8383.3 chr14 + 3012 16 novel_not_in_catalog SYVN1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1828 130.268952556 2 4 1 FALSE 0 0 NA C coding 622 1866 82 1947 5 PB.11796.1 chrX + 2662 15 full-splice_match MOSPD2 rna63354 4143 15 183 1298 multi-exon FALSE canonical 44 282 1465 137.080268456 29 0 0 FALSE 0 0 NA A coding 518 1554 47 1600 75 PB.8383.1 chr14 + 2969 16 full-splice_match SYVN1 rna45273 2560 16 58 -467 multi-exon FALSE canonical 6 6 1164 128.179561553 129 2 0 FALSE 0 0 NA C coding 617 1851 60 1910 15 PB.7677.2 chr12 + 1574 10 novel_not_in_catalog LOC694114 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 4 8 960 448.782798244 2 1 0 TRUE 0 0 NA B coding 324 972 19 990 65 PB.8926.7 chr14 + 1688 11 novel_not_in_catalog ST3GAL4 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 39 350.807639598 8 0 0 FALSE 0 0 NA C coding 333 999 100 1098 20 PB.8383.4 chr14 + 3071 15 novel_in_catalog SYVN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 6 6 1186 129.313572374 2 19 0 FALSE 0 0 NA C coding 654 1962 82 2043 5 PB.9416.1 chr15 - 2712 1 intergenic novelGene_1887 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A coding 156 468 2245 2712 85 PB.2548.1 chr3 - 2980 1 genic_intron novelGene_2398 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.9416.3 chr15 - 1698 3 novel_not_in_catalog LOC106993834 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 79 95.4986910905 2 7 0 FALSE 0 0 NA B non_coding NA NA NA NA 35 PB.9416.2 chr15 - 3521 4 novel_not_in_catalog LOC106993834 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 8 10 103 76.9415362467 6 2 0 FALSE 0 0 NA B coding 4 12 302 313 75 PB.888.4 chr1 - 2995 21 novel_not_in_catalog CAPN2 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 6 8 160 396.362208088 4 3 0 FALSE 0 0 NA C coding 375 1125 899 2023 35 PB.3473.14 chr5 + 4133 27 novel_in_catalog SEC31A novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 177 3029 592.070941695 2 4 0 FALSE 0 0 NA C coding 1219 3657 65 3721 20 PB.6137.1 chr10 - 763 4 full-splice_match PPDPF rna33507 759 4 -5 1 multi-exon FALSE canonical 4 4 128 49.3761075825 10 0 0 FALSE 0 0 NA A coding 114 342 154 495 15 PB.8202.3 chr13 - 2691 3 novel_not_in_catalog RNF149 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 9 16 1971 242 2 4 0 FALSE 0 0 NA C non_coding NA NA NA NA 45 PB.11493.1 chr20 + 1530 1 genic_intron novelGene_671 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.10851.3 chr19 - 2579 18 incomplete-splice_match ATP13A1 rna58497 3883 26 1297 7 5prime_fragment FALSE canonical 16 26 1379 106.583300756 4 1 0 FALSE 0 0 NA B coding 692 2076 284 2359 30 PB.10851.2 chr19 - 2810 21 novel_not_in_catalog ATP13A1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 16 26 1610 111.38671375 2 20 1 FALSE 0 0 NA B coding 572 1716 875 2590 30 PB.8202.5 chr13 - 1981 7 full-splice_match RNF149 rna44285 1992 7 0 11 multi-exon FALSE canonical 48 3576 966 593.241940527 16 1 0 FALSE 0 0 NA C coding 400 1200 104 1303 30 PB.4430.1 chr7 + 3669 23 full-splice_match BUB1B rna24023 3739 23 65 5 multi-exon FALSE canonical 19 175 179 129.147202835 7 7 0 FALSE 0 0 NA A coding 755 2265 145 2409 30 PB.9823.1 chr16 - 2471 8 novel_not_in_catalog NR1D1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 10 11 1987 17.9443584449 2 0 0 TRUE 0 0 NA A coding 613 1839 346 2184 10 PB.11908.2 chrX + 2000 13 full-splice_match MAGED2 rna64082 2098 13 93 5 multi-exon FALSE canonical 41 1144 12 961.081682273 13 0 0 FALSE 0 0 NA C coding 606 1818 42 1859 10 PB.11908.1 chrX + 2038 13 full-splice_match MAGED2 rna64080 2192 13 142 12 multi-exon TRUE canonical 41 1258 57 941.64271356 22 0 0 FALSE 0 0 NA C coding 606 1818 87 1904 15 PB.8202.8 chr13 - 2976 1 novel_in_catalog RNF149 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 5 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.1516.1 chr2 + 3515 9 full-splice_match WDR82 rna8173 2103 9 281 -1693 multi-exon FALSE canonical 48 1172 686 367.492857073 18 3 0 FALSE 0 0 NA A coding 199 597 330 926 50 PB.4181.1 chr6 - 1858 1 full-splice_match LOC693870 gene11301 1896 1 1185 -1147 mono-exon FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.4450.1 chr7 - 1498 5 full-splice_match NDUFAF1 rna24124 1478 5 -31 11 multi-exon FALSE canonical 44 495 349 55.4797260267 8 1 0 FALSE 0 0 NA A coding 327 981 431 1411 35 PB.5114.1 chr7 + 3934 2 full-splice_match C7H14orf132 rna27652 1832 2 47 -2149 multi-exon FALSE canonical 19 109 175 NA 13 6 0 FALSE 0 0 NA A coding 83 249 149 397 95 PB.3473.10 chr5 + 3875 26 novel_not_in_catalog SEC31A novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2646 622.252360381 4 5 0 FALSE 0 0 NA C coding 841 2523 96 2618 20 PB.4161.1 chr6 + 2687 17 full-splice_match TGFBI rna22536 2916 17 226 3 multi-exon FALSE canonical 31 304 172 561.016042551 130 1 0 FALSE 0 0 NA A coding 683 2049 39 2087 10 PB.7124.1 chr11 - 1466 2 genic LOC693895 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 993 NA 200 8 0 FALSE 0 0 NA C non_coding NA NA NA NA 55 PB.1876.1 chr2 - 2827 1 genic_intron novelGene_2537 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.7124.2 chr11 - 1608 1 full-splice_match LOC693895 rna38652 992 1 8 -624 mono-exon FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA C coding 245 735 70 804 55 PB.8518.1 chr14 - 3407 31 full-splice_match DGKZ rna46094 3647 31 238 2 multi-exon FALSE canonical 19 33 1918 354.012711636 2 0 0 FALSE 0 0 NA C coding 929 2787 9 2795 0 PB.3703.1 chr5 + 3606 24 full-splice_match SMARCA5 rna20132 3846 24 249 -9 multi-exon FALSE canonical 44 656 396 841.296024001 55 0 0 FALSE 0 0 NA C coding 1052 3156 220 3375 25 PB.8518.4 chr14 - 3397 31 full-splice_match DGKZ rna46092 3407 31 4 6 multi-exon FALSE canonical 19 33 1912 353.755565327 38 2 0 FALSE 0 0 NA C coding 894 2682 108 2789 0 PB.4761.1 chr7 - 2685 4 novel_not_in_catalog FAM174B novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 1304 55.5517776493 2 6 0 TRUE 0 0 NA A coding 157 471 96 566 30 PB.8518.6 chr14 - 3251 25 novel_in_catalog DGKZ novel NA NA NA NA combination_of_known_junctions FALSE canonical 19 33 1915 369.020324644 2 4 0 FALSE 0 0 NA C coding 747 2241 108 2348 40 PB.1857.1 chr2 + 3619 1 genic_intron novelGene_2501 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 14 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.8546.1 chr14 - 1948 9 full-splice_match CD44 rna46297 4760 9 473 2339 multi-exon FALSE canonical 42 588 236 362.398951433 27 0 0 FALSE 0 0 NA C coding 361 1083 170 1252 10 PB.8546.2 chr14 + 1612 1 genic_intron novelGene_704 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.908.1 chr1 - 1793 12 full-splice_match SMYD2 rna4942 1802 12 2 7 multi-exon FALSE canonical 38 843 325 360.653573391 11 0 0 FALSE 0 0 NA A coding 433 1299 153 1451 20 PB.4477.1 chr7 + 1689 4 incomplete-splice_match MAP1A rna24264 10273 6 30 8554 3prime_fragment FALSE canonical 24 449 61 304.309053431 6 0 0 FALSE 0 0 NA A coding 418 1254 436 1689 70 PB.5757.3 chr9 - 2775 2 genic_intron novelGene_837 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 149 NA 2 7 0 FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.5000.3 chr7 - 3471 21 novel_not_in_catalog ACTN1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2616 257.970928595 3 7 0 TRUE 0 0 NA C coding 793 2379 266 2644 25 PB.9857.1 chr16 + 1834 8 full-splice_match MLX rna53462 1884 8 49 1 multi-exon FALSE canonical 43 779 63 169.879368965 30 0 0 FALSE 0 0 NA C coding 244 732 22 753 35 PB.9857.2 chr16 + 2011 8 full-splice_match MLX rna53465 2034 8 18 5 multi-exon FALSE canonical 39 86 244 392.458915047 2 3 0 FALSE 0 0 NA C coding 249 747 188 934 20 PB.9857.3 chr16 + 2034 7 novel_in_catalog MLX novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 779 64 178.347974477 2 4 0 FALSE 0 0 NA C coding 165 495 23 517 20 PB.968.1 chr1 + 3752 1 novel_in_catalog PLEKHA6 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.8639.3 chr14 - 3219 23 novel_in_catalog PPFIBP2 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical 0 0 1450 250.205915198 2 11 0 FALSE 0 0 NA C coding 441 1323 218 1540 50 PB.8639.2 chr14 - 3466 22 novel_in_catalog PPFIBP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 15 26 580 206.734128774 6 0 0 FALSE 0 0 NA C coding 717 2151 776 2926 40 PB.10859.3 chr19 + 2735 2 novel_in_catalog LOC100429705 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 21 40 115 NA 2 23 0 FALSE 0 0 NA B non_coding NA NA NA NA 35 PB.10859.2 chr19 + 2988 4 novel_in_catalog LOC100429705 novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 125 274 11.6189500386 3 5 0 FALSE 0 0 NA B coding 629 1887 145 2031 40 PB.10859.1 chr19 + 3081 5 novel_not_in_catalog LOC100429705 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 17 29 238 52.9150262213 5 3 0 FALSE 0 0 NA B coding 597 1791 332 2122 35 PB.431.1 chr1 - 3152 6 full-splice_match PLPP3 rna2289 3695 6 532 11 multi-exon FALSE canonical 36 1664 571 534.985981125 27 2 0 FALSE 0 0 NA A coding 311 933 433 1365 50 PB.1715.1 chr2 - 1023 6 full-splice_match NDUFB5 rna9177 1044 6 15 6 multi-exon FALSE canonical 48 3360 133 1168.73008004 8 0 0 FALSE 0 0 NA A coding 189 567 10 576 45 PB.1922.1 chr2 + 2410 13 full-splice_match DYNC1LI1 rna10323 3971 13 1554 7 multi-exon FALSE canonical 45 316 170 342.347776391 9 3 0 FALSE 0 0 NA C coding 523 1569 25 1593 30 PB.838.4 chr1 - 3713 5 novel_in_catalog B4GALT3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 42 314 2517 185.55592149 2 3 0 FALSE 0 0 NA C coding 173 519 2689 3207 10 PB.4493.3 chr7 + 1388 2 novel_not_in_catalog B2M novel NA NA NA NA not any annotated donor/acceptor FALSE canonical 2 5 1341 NA 2 2 0 TRUE 0 0 NA C non_coding NA NA NA NA 95 PB.8393.5 chr14 - 3041 2 genic PPP2R5B novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 932 NA 2 7 0 TRUE 0 0 NA B coding 161 483 1923 2405 80 PB.4493.1 chr7 + 2802 2 full-splice_match B2M rna24332 1004 2 28 -1826 multi-exon FALSE canonical 48 130013 97 NA 103 0 0 FALSE 0 0 NA C coding 122 366 31 396 15 PB.4493.7 chr7 + 1855 1 novel_in_catalog B2M novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 5 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 25 PB.4493.6 chr7 + 3222 3 novel_in_catalog B2M novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 130013 97 19346 12 1 0 FALSE 0 0 NA C coding 119 357 31 387 60 PB.8393.2 chr14 - 2705 15 novel_not_in_catalog PPP2R5B novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 445 240.78621223 19 4 0 TRUE 0 0 NA B coding 497 1491 586 2076 25 PB.8393.3 chr14 - 2793 14 novel_not_in_catalog PPP2R5B novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 460 249.789911726 11 6 0 TRUE 0 0 NA B coding 321 963 601 1563 25 PB.372.1 chr1 + 1514 3 full-splice_match TMEM69 rna1980 1120 3 16 -410 multi-exon FALSE canonical 42 636 58 45.4972526643 17 1 0 FALSE 0 0 NA C coding 246 738 155 892 15 PB.2718.2 chr4 + 1828 2 genic_intron novelGene_261 novel NA NA NA NA no_subcategory FALSE canonical 0 0 52 NA 2 4 1 FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.4863.2 chr7 + 2882 5 full-splice_match FAM177A1 rna26336 822 5 -12 -2048 multi-exon FALSE canonical 45 826 225 389.101529167 13 0 0 FALSE 0 0 NA C coding 235 705 64 768 10 PB.4863.3 chr7 + 2482 1 genic_intron novelGene_1772 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.4863.1 chr7 + 2920 6 full-splice_match FAM177A1 rna26335 2952 6 25 7 multi-exon FALSE canonical 1 1 146 661.20269207 7 2 0 FALSE 0 0 NA C coding 212 636 175 810 25 PB.576.1 chr1 + 2481 19 full-splice_match STXBP3 rna3153 2532 19 40 11 multi-exon FALSE canonical 46 924 316 241.377298021 4 2 0 FALSE 0 0 NA A coding 592 1776 59 1834 35 PB.5512.1 chr8 - 3071 25 novel_in_catalog ENPP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 26 243 1775 266.480768537 39 0 0 FALSE 0 0 NA C coding 859 2577 60 2636 5 PB.12126.3 chrX - 1796 4 full-splice_match MECP2 rna65599 9242 4 -53 7499 multi-exon FALSE canonical 42 193 113 73.5798885566 17 0 0 FALSE 0 0 NA C coding 482 1446 224 1669 30 PB.9397.6 chr15 - 2906 17 novel_not_in_catalog HNRNPK novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1313 4430.5715207 2 7 0 FALSE 0 0 NA C coding 387 1161 206 1366 20 PB.12126.1 chrX - 6280 1 incomplete-splice_match MECP2 rna65599 9242 4 917 2046 mono-exon FALSE canonical NA NA NA NA 6 3 NA FALSE 0 0 NA C coding 69 207 494 700 85 PB.379.6 chr1 - 2723 14 full-splice_match MKNK1 rna2031 2792 14 55 14 multi-exon FALSE canonical 25 48 218 99.473614592 2 5 0 FALSE 0 0 NA C coding 414 1242 322 1563 10 PB.9333.1 chr15 - 3192 1 novel_in_catalog RIC1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.4796.1 chr7 + 954 2 full-splice_match RNASE6 rna25886 923 2 47 -78 multi-exon FALSE canonical 46 2083 190 NA 13 1 0 FALSE 0 0 NA A coding 150 450 196 645 20 PB.4113.1 chr6 - 1864 1 antisense novelGene_LMNB1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.10899.1 chr19 + 2562 20 novel_not_in_catalog HAUS5 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 533 51.9422756529 3 4 0 TRUE 0 0 NA A coding 401 1203 743 1945 90 PB.706.1 chr1 - 2522 10 full-splice_match FAM63A rna3790 2933 10 398 13 multi-exon FALSE canonical 27 44 1993 91.4549069214 5 3 0 FALSE 0 0 NA A coding 466 1398 674 2071 10 PB.6055.2 chr9 - 3251 19 full-splice_match AFAP1L2 rna33013 2973 19 -16 -262 multi-exon FALSE canonical 31 142 63 120.805629008 2 2 0 FALSE 0 0 NA C coding 818 2454 48 2501 35 PB.4775.1 chr7 - 2655 3 full-splice_match LYSMD4 rna25740 2727 3 62 10 multi-exon FALSE canonical 29 66 340 16 10 1 0 FALSE 0 0 NA A coding 296 888 59 946 35 PB.11593.4 chr20 - 944 8 full-splice_match PSMB10 rna62574 992 8 27 21 multi-exon FALSE canonical 30 134 463 358.244330032 4 2 0 FALSE 0 0 NA C coding 273 819 81 899 55 PB.12217.1 chrUn_NW_015067827v1 - 1178 1 intergenic novelGene_31 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 18 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 45 PB.2782.1 chr4 + 1465 4 novel_in_catalog LRRC16A novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 552 208 133.499063667 2 4 0 FALSE 0 0 NA B coding 114 342 8 349 75 PB.7536.1 chr12 + 3833 4 full-splice_match KLHL23 rna40679 3907 4 62 12 multi-exon FALSE canonical 14 38 239 241.248834194 2 3 0 FALSE 0 0 NA C coding 558 1674 242 1915 30 PB.3608.1 chr5 + 5489 1 intergenic novelGene_1802 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 12 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1522.1 chr2 - 1448 15 full-splice_match ACY1 rna8191 1670 15 194 28 multi-exon FALSE canonical 32 765 106 1044.05411737 21 1 0 FALSE 0 0 NA C coding 408 1224 125 1348 25 PB.440.1 chr1 - 2966 1 antisense novelGene_NFIA_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 13 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.4388.1 chr6 - 2810 1 novel_in_catalog TRIM52 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 9 4 NA FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.4388.2 chr6 - 3103 2 full-splice_match TRIM52 rna23700 3243 2 126 14 multi-exon FALSE canonical 46 305 1076 NA 19 0 0 FALSE 0 0 NA C coding 276 828 267 1094 30 PB.1592.2 chr2 - 5207 25 full-splice_match PTPN23 rna8592 5253 25 46 0 multi-exon FALSE canonical 11 15 2193 93.0859817588 3 3 0 FALSE 0 0 NA C coding 1632 4896 65 4960 15 PB.6556.1 chr10 + 2951 1 novel_in_catalog HMOX1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 4 NA FALSE 0 0 NA A coding 185 555 1552 2106 80 PB.2740.1 chr4 - 1437 1 genic_intron novelGene_377 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.1856.1 chr2 - 1784 15 full-splice_match PCCB rna9935 1784 15 -1 1 multi-exon FALSE canonical 42 600 207 300.341472328 15 2 0 FALSE 0 0 NA A coding 539 1617 25 1641 15 PB.8064.1 chr13 - 1706 3 full-splice_match CNRIP1 rna43682 1907 3 199 2 multi-exon FALSE canonical 32 341 540 233 7 0 0 FALSE 0 0 NA A coding 164 492 362 853 15 PB.729.1 chr1 - 558 3 full-splice_match S100A11 rna3925 532 3 14 -40 multi-exon FALSE canonical 48 1988 88 773 13 0 0 FALSE 0 0 NA A coding 105 315 86 400 30 PB.11050.1 chr19 + 6328 6 full-splice_match ARHGAP35 rna59709 9095 6 2177 590 multi-exon FALSE canonical 36 627 1944 173.85626247 2 14 0 FALSE 0 0 NA C coding 631 1893 645 2537 85 PB.8867.1 chr14 - 3511 2 incomplete-splice_match BCL9L rna48193 7536 8 4015 10 5prime_fragment FALSE canonical 5 5 154 NA 2 1 0 FALSE 0 0 NA A coding 413 1239 7 1245 25 PB.6881.1 chr11 - 1629 5 full-splice_match YARS2 rna37456 1885 5 148 108 multi-exon FALSE canonical 47 723 1124 112.774110504 9 0 0 FALSE 0 0 NA A coding 477 1431 22 1452 25 PB.10011.2 chr16 + 3160 5 novel_in_catalog SLC9A3R1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 150 658 237.985293663 2 2 0 FALSE 0 0 NA C coding 293 879 218 1096 20 PB.2113.1 chr3 + 3955 5 full-splice_match HSPA13 rna11340 2271 5 53 -1737 multi-exon FALSE canonical 40 835 56 343.845895715 21 5 0 FALSE 0 0 NA A coding 471 1413 32 1444 30 PB.10108.2 chr16 + 2655 17 full-splice_match LRRC45 rna54630 2702 17 42 5 multi-exon FALSE canonical 7 9 2118 81.0431983574 11 0 0 FALSE 0 0 NA C coding 670 2010 303 2312 15 PB.11853.1 chrX + 3662 5 full-splice_match RP2 rna63757 2913 5 93 -842 multi-exon FALSE canonical 45 285 160 98.2649479723 36 0 0 FALSE 0 0 NA C coding 350 1050 59 1108 35 PB.982.1 chr1 + 1612 9 full-splice_match CYB5R1 rna5402 1620 9 4 4 multi-exon FALSE canonical 34 228 67 516.45909809 14 0 0 FALSE 0 0 NA A coding 305 915 53 967 15 PB.2194.1 chr3 - 2798 6 full-splice_match CRCP rna11704 2866 6 57 11 multi-exon FALSE canonical 38 229 114 109.119200877 4 2 0 FALSE 0 0 NA A coding 148 444 107 550 35 PB.10754.2 chr19 - 1292 8 full-splice_match STX10 rna58039 763 8 -193 -336 multi-exon FALSE canonical 41 197 234 162.566909302 4 0 0 FALSE 0 0 NA A coding 249 747 200 946 15 PB.5013.1 chr7 + 5954 22 novel_in_catalog SIPA1L1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 25 92 5440 222.919267898 2 2 0 FALSE 0 0 NA A coding 1783 5349 433 5781 50 PB.6125.5 chr10 + 1665 5 novel_in_catalog RGS19 novel NA NA NA NA combination_of_known_junctions FALSE canonical 28 78 513 135.166563913 3 1 0 FALSE 0 0 NA C coding 217 651 362 1012 25 PB.6125.4 chr10 + 1485 5 full-splice_match RGS19 rna33435 1819 5 332 2 multi-exon FALSE canonical 4 4 211 159.937487788 18 7 0 FALSE 0 0 NA C coding 195 585 248 832 25 PB.6125.3 chr10 + 1526 6 full-splice_match RGS19 rna33436 1238 6 156 -444 multi-exon FALSE canonical 14 24 158 140.509786136 105 0 0 FALSE 0 0 NA C coding 217 651 227 877 40 PB.6125.2 chr10 + 1415 6 full-splice_match RGS19 rna33434 1496 6 79 2 multi-exon FALSE canonical 7 11 43 143.230583326 7 3 0 FALSE 0 0 NA C coding 217 651 112 762 25 PB.6125.1 chr10 + 1505 6 full-splice_match RGS19 rna33436 1238 6 182 -449 multi-exon FALSE canonical 14 24 132 140.509786136 5 0 0 FALSE 0 0 NA C coding 217 651 201 851 25 PB.8236.1 chr13 - 3207 9 full-splice_match CKAP2L rna44520 4775 9 45 1523 multi-exon FALSE canonical 16 66 1842 44.7883913531 3 4 0 FALSE 0 0 NA A coding 742 2226 30 2255 10 PB.8147.3 chr13 - 3006 1 novel_in_catalog FABP1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 28 0 NA FALSE 0 0 NA B non_coding NA NA NA NA 70 PB.1398.3 chr2 + 2646 1 genic_intron novelGene_1094 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.9590.2 chr16 + 3109 4 full-splice_match ALKBH5 rna52127 2994 4 -122 7 multi-exon FALSE canonical 48 1931 1389 375.454391371 10 17 0 FALSE 0 0 NA C coding 394 1182 383 1564 25 PB.9590.3 chr16 + 1451 1 incomplete-splice_match ALKBH5 rna52127 2994 4 1536 8 mono-exon FALSE canonical NA NA NA NA 14 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 25 PB.7110.1 chr11 - 6915 35 full-splice_match ZFC3H1 rna38576 7141 35 137 89 multi-exon FALSE canonical 43 193 5729 210.432887164 2 2 0 FALSE 0 0 NA A coding 1989 5967 204 6170 25 PB.9782.1 chr16 + 1524 5 full-splice_match MRPL10 rna53030 1538 5 19 -5 multi-exon FALSE canonical 33 114 59 177.448584103 79 2 0 FALSE 0 0 NA A coding 262 786 8 793 15 PB.413.3 chr1 - 3197 4 novel_in_catalog C1H1orf123 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1597 2419 74.404300951 2 5 0 FALSE 0 0 NA B coding 129 387 2252 2638 20 PB.413.1 chr1 - 2768 6 novel_in_catalog C1H1orf123 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 694 39 400.711866558 5 1 0 FALSE 0 0 NA B non_coding NA NA NA NA 20 PB.10212.2 chr17 - 2863 7 novel_in_catalog MRPS31 novel NA NA NA NA combination_of_known_junctions FALSE canonical 14 18 1764 636.536723214 12 1 0 FALSE 0 0 NA C coding 344 1032 1766 2797 30 PB.10212.3 chr17 - 3162 7 novel_not_in_catalog MRPS31 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1874 642.678768904 2 15 1 TRUE 0 0 NA C coding 344 1032 2066 3097 25 PB.4567.1 chr7 - 3732 2 novel_in_catalog RORA novel NA NA NA NA combination_of_known_junctions FALSE canonical 45 396 145 NA 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.10212.1 chr17 - 1298 7 full-splice_match MRPS31 rna55112 1422 7 121 3 multi-exon FALSE canonical 47 1117 640 292.586739276 6 0 0 FALSE 0 0 NA C coding 344 1032 198 1229 25 PB.4829.2 chr7 + 1693 8 novel_in_catalog IRF9 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 781 1430 410.961068716 2 2 0 FALSE 0 0 NA C coding 140 420 1199 1618 15 PB.10212.4 chr17 - 2756 1 novel_in_catalog MRPS31 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 9 1 NA FALSE 0 0 NA C coding 46 138 364 501 90 PB.5137.1 chr7 + 4374 1 incomplete-splice_match YY1 rna27702 6338 5 1962 3 mono-exon FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA C coding 128 384 1510 1893 10 PB.2207.5 chr3 - 3013 1 genic_intron novelGene_1126 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A coding 101 303 829 1131 85 PB.2207.6 chr3 - 1885 1 genic_intron novelGene_1129 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.9005.1 chr15 + 3354 1 incomplete-splice_match TSC1 rna48995 8575 22 5217 5 mono-exon FALSE canonical NA NA NA NA 4 10 NA FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.2207.1 chr3 - 2882 5 full-splice_match VOPP1 rna11788 2975 5 86 7 multi-exon FALSE canonical 28 87 163 116.348614087 11 1 0 FALSE 0 0 NA A coding 172 516 110 625 10 PB.11058.1 chr19 - 1661 12 full-splice_match KPTN rna59741 1695 12 18 16 multi-exon FALSE canonical 30 83 1273 102.6791118 2 0 0 FALSE 0 0 NA A coding 435 1305 95 1399 25 PB.4849.1 chr7 - 3361 15 incomplete-splice_match HECTD1 rna26271 8228 42 4864 3 5prime_fragment FALSE canonical 47 1146 572 432.493930593 3 0 0 FALSE 0 0 NA B coding 736 2208 339 2546 30 PB.4950.1 chr7 - 1777 2 full-splice_match LOC106999448 rna26699 488 2 271 -1560 multi-exon FALSE canonical 46 302 172 NA 2 2 0 FALSE 0 0 NA C coding 106 318 1403 1720 45 PB.3257.1 chr4 - 3087 23 full-splice_match FIG4 rna17708 2959 23 -138 10 multi-exon FALSE canonical 46 430 1960 110.068160701 23 1 0 FALSE 0 0 NA C coding 907 2721 211 2931 30 PB.3257.2 chr4 - 2863 22 novel_in_catalog FIG4 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical 27 49 428 163.679565004 2 1 0 FALSE 0 0 NA C coding 724 2172 532 2703 20 PB.4950.2 chr7 - 2604 1 novel_in_catalog LOC106999448 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 10 NA FALSE 0 0 NA C coding 119 357 37 393 65 PB.1115.9 chr1 - 2454 1 genic_intron novelGene_2629 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.1286.3 chr2 - 2685 1 novel_in_catalog SPICE1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.5003.3 chr7 + 2824 1 incomplete-splice_match SLC39A9 rna26979 4672 7 1844 5 mono-exon FALSE canonical NA NA NA NA 8 5 NA FALSE 0 0 NA C non_coding NA NA NA NA 25 PB.5003.2 chr7 + 5344 7 full-splice_match SLC39A9 rna26978 5395 7 47 4 multi-exon FALSE canonical 45 720 1209 139.828466344 7 10 0 FALSE 0 0 NA C coding 307 921 652 1572 25 PB.1522.2 chr2 - 1523 14 novel_in_catalog ACY1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 35 765 100 1055.94933591 2 3 0 FALSE 0 0 NA C coding 387 1161 119 1279 20 PB.1115.2 chr1 - 3371 1 genic RCSD1 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 45 PB.6323.1 chr10 - 3749 18 full-splice_match TM9SF4 rna34446 3716 18 -9 -24 multi-exon FALSE canonical 39 412 36 257.854610197 110 2 0 FALSE 0 0 NA C coding 642 1926 22 1947 10 PB.1115.7 chr1 - 2637 2 novel_not_in_catalog RCSD1 novel NA NA NA NA not any annotated donor/acceptor FALSE canonical 0 0 31 NA 2 4 1 TRUE 0 0 NA C coding 200 600 351 950 10 PB.6323.6 chr10 - 2526 1 novel_in_catalog TM9SF4 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 5 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.2132.1 chr3 - 2999 22 novel_not_in_catalog IQCE novel NA NA NA NA any annotated donor/acceptor TRUE canonical 1 1 1854 185.16479147 2 2 0 FALSE 0 0 NA A coding 721 2163 112 2274 25 PB.6323.4 chr10 - 3632 17 novel_in_catalog TM9SF4 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 2 2 31 309.291124994 2 0 0 FALSE 0 0 NA C coding 600 1800 29 1828 10 PB.10395.12 chr18 - 3611 25 incomplete-splice_match SMCHD1 rna56157 7862 48 -215 4466 internal_fragment FALSE canonical 48 1434 535 477.560467376 3 0 0 FALSE 0 0 NA C coding 1087 3261 350 3610 60 PB.10395.13 chr18 - 1421 9 incomplete-splice_match SMCHD1 rna56157 7862 48 -218 6659 internal_fragment FALSE canonical 48 1434 538 625.844229821 2 2 0 FALSE 0 0 NA C coding 356 1068 353 1420 60 PB.1036.1 chr1 + 3011 1 novel_in_catalog EDEM3 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 13 5 NA FALSE 0 0 NA B coding 53 159 141 299 90 PB.8952.2 chr14 + 2882 20 novel_not_in_catalog GLB1L2 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 2307 78.249600638 3 7 1 TRUE 0 0 NA B coding 636 1908 69 1976 20 PB.8658.11 chr14 + 3530 1 genic_intron novelGene_1246 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 10 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.2281.2 chr3 - 2714 5 novel_not_in_catalog AQP1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 113 3225.5894035 2 2 0 TRUE 0 0 NA A coding 174 522 316 837 5 PB.8786.2 chr14 + 2735 6 incomplete-splice_match BIRC2 rna47748 3760 9 -14 1039 3prime_fragment FALSE canonical 48 549 160 656.709981651 5 1 0 FALSE 0 0 NA C coding 400 1200 1535 2734 60 PB.8885.1 chr14 - 3098 12 full-splice_match USP2 rna48252 3095 12 -5 2 multi-exon FALSE canonical 15 35 420 69.3181073025 2 9 0 FALSE 0 0 NA A coding 396 1188 274 1461 25 PB.1383.1 chr2 + 3656 29 full-splice_match IFT122 rna7384 3934 29 269 9 multi-exon FALSE canonical 24 102 3002 117.936423551 18 0 0 FALSE 0 0 NA A coding 1182 3546 27 3572 20 PB.6139.1 chr10 - 3191 13 full-splice_match ARFGAP1 rna33536 2528 13 -10 -653 multi-exon FALSE canonical 36 172 108 103.179455319 29 3 0 FALSE 0 0 NA C coding 406 1218 113 1330 30 PB.6139.2 chr10 - 3075 12 novel_in_catalog ARFGAP1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 8 8 164 138.596536753 2 2 0 FALSE 0 0 NA C coding 353 1059 154 1212 25 PB.2989.1 chr4 + 2809 12 novel_in_catalog FBXO9 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical 0 0 619 706.358973894 17 7 0 FALSE 0 0 NA C coding 315 945 371 1315 45 PB.10381.1 chr18 + 1704 4 full-splice_match FAM210A rna56048 1205 4 61 -560 multi-exon FALSE canonical 41 225 161 168.653490921 4 1 0 FALSE 0 0 NA A coding 272 816 190 1005 20 PB.11798.1 chrX - 3564 6 full-splice_match PIGA rna63365 3609 6 31 14 multi-exon FALSE canonical 35 198 802 218.116941112 8 4 1 FALSE 0 0 NA A coding 484 1452 88 1539 20 PB.7587.1 chr12 - 1882 6 full-splice_match FRZB rna40949 1910 6 32 -4 multi-exon FALSE canonical 31 1157 658 285.438259524 34 0 0 FALSE 0 0 NA A coding 325 975 67 1041 5 PB.8786.1 chr14 + 3715 9 full-splice_match BIRC2 rna47748 3760 9 48 -3 multi-exon FALSE canonical 46 549 98 534.933640744 45 0 0 FALSE 0 0 NA C coding 580 1740 1473 3212 45 PB.10112.1 chr16 + 1949 5 full-splice_match SLC16A3 rna54654 2056 5 93 14 multi-exon FALSE canonical 15 36 43 271.283984046 8 3 0 FALSE 0 0 NA C coding 465 1395 70 1464 25 PB.10468.5 chr18 - 2811 16 full-splice_match MBD1 rna56619 3315 16 501 3 multi-exon FALSE canonical 32 96 1155 447.489664685 2 6 0 FALSE 0 0 NA C coding 549 1647 178 1824 15 PB.10112.3 chr16 + 1971 5 full-splice_match SLC16A3 rna54655 1994 5 25 -2 multi-exon FALSE canonical 10 16 49 279.359982818 25 2 0 FALSE 0 0 NA C coding 465 1395 76 1470 10 PB.10112.2 chr16 + 2840 4 novel_in_catalog SLC16A3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 15 36 111 236.715018535 2 7 0 FALSE 0 0 NA C coding 432 1296 138 1433 25 PB.2668.1 chr3 + 6505 18 novel_in_catalog RBM33 novel NA NA NA NA combination_of_known_junctions TRUE canonical 16 22 1934 563.062163531 2 4 0 FALSE 0 0 NA B coding 1181 3543 165 3707 30 PB.1210.1 chr1 + 3886 11 novel_not_in_catalog NLRP3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 3 3 18 36.5239647355 5 1 0 FALSE 0 0 NA A coding 1033 3099 180 3278 50 PB.6513.11 chr10 - 2873 1 genic_intron novelGene_1441 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA A coding 99 297 1970 2266 75 PB.5172.138 chr7 + 1501 10 fusion LOC720839_LOC711872_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 188 2568.86764937 2 19 0 TRUE 0 0 NA B coding 114 342 1 342 25 PB.5172.139 chr7 + 1496 6 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 378 2827.14166606 2 20 0 TRUE 0 0 NA B coding 157 471 17 487 20 PB.6974.2 chr11 + 1684 4 novel_in_catalog SOAT2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 16 43 320 17.1464281995 5 3 0 FALSE 0 0 NA A coding 104 312 118 429 75 PB.7653.1 chr12 + 1757 1 antisense novelGene_LOC106992700_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.5172.134 chr7 + 1468 7 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 356 2845.63244289 2 17 0 TRUE 0 0 NA B coding 123 369 17 385 20 PB.5172.135 chr7 + 1494 9 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 97 2730.95898907 19 12 0 TRUE 0 0 NA B coding 112 336 17 352 20 PB.5172.136 chr7 + 1494 9 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 187 2245.43603783 2 15 0 TRUE 0 0 NA B coding 245 735 710 1444 15 PB.5172.130 chr7 + 1478 9 fusion LOC720839_LOC711872_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 216 2616.16838143 2 7 0 TRUE 0 0 NA B coding 477 1431 1 1431 25 PB.5172.131 chr7 + 1580 9 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE canonical 0 0 216 3392.99705275 2 15 0 TRUE 0 0 NA B coding 196 588 866 1453 15 PB.3969.1 chr6 - 2642 11 full-splice_match MRPS27 rna21608 2674 11 23 9 multi-exon FALSE canonical 40 356 83 180.04721603 64 1 0 FALSE 0 0 NA A coding 414 1242 11 1252 20 PB.2295.1 chr3 + 1855 8 novel_not_in_catalog HIBADH novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 165 916.941110432 28 2 0 FALSE 0 0 NA A coding 287 861 222 1082 15 PB.1393.1 chr2 - 2062 12 full-splice_match TMEM43 rna7439 3345 12 136 1147 multi-exon FALSE canonical 46 340 123 605.590620799 116 2 0 FALSE 0 0 NA C coding 400 1200 112 1311 55 PB.11084.1 chr19 + 4062 25 full-splice_match TRPM4 rna59916 4134 25 56 16 multi-exon FALSE canonical 3 4 520 49.0306026885 33 1 0 FALSE 0 0 NA A coding 1215 3645 73 3717 30 PB.1393.5 chr2 - 3102 11 novel_in_catalog TMEM43 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 2 2 170 666.208676017 3 2 0 FALSE 0 0 NA C coding 350 1050 159 1208 25 PB.5172.95 chr7 + 1556 8 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 333 3335.83752602 2 7 0 TRUE 0 0 NA B coding 196 588 842 1429 15 PB.6962.1 chr11 - 955 8 full-splice_match DENR rna37894 1053 8 73 25 multi-exon FALSE canonical 43 371 99 386.676867682 7 0 0 FALSE 0 0 NA A coding 198 594 109 702 10 PB.1938.1 chr2 - 3132 1 genic_intron novelGene_2604 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 3 NA FALSE 0 0 NA A coding 103 309 2110 2418 75 PB.6203.4 chr10 + 5936 1 genic_intron novelGene_360 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A coding 111 333 3058 3390 80 PB.954.5 chr1 + 1618 5 incomplete-splice_match RAB29 rna5204 1465 6 33 -186 internal_fragment FALSE canonical 42 362 240 163.670400501 8 1 0 FALSE 0 0 NA C coding 203 609 117 725 90 PB.4938.1 chr7 + 5946 6 full-splice_match PELI2 rna26658 5958 6 1 11 multi-exon FALSE canonical 42 192 806 53.5256947643 3 4 0 FALSE 0 0 NA A coding 420 1260 300 1559 10 PB.6216.2 chr10 - 2326 13 full-splice_match MMP9 rna33907 2327 13 -7 8 multi-exon FALSE canonical 20 60 1769 179.418505177 53 0 0 FALSE 0 0 NA A coding 707 2121 20 2140 35 PB.8942.1 chr14 + 2658 1 genic_intron novelGene_2112 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 15 NA FALSE 0 0 NA A coding 99 297 161 457 90 PB.8926.5 chr14 + 6554 2 novel_not_in_catalog ST3GAL4 novel NA NA NA NA not any annotated donor/acceptor FALSE non_canonical 0 0 1628 NA 10 37 0 TRUE 0 0 NA C coding 107 321 2005 2325 95 PB.1240.1 chr2 + 3677 19 full-splice_match TBC1D23 rna6774 3872 19 177 18 multi-exon FALSE canonical 45 701 72 285.347156986 8 0 0 FALSE 0 0 NA C coding 699 2097 20 2116 35 PB.1240.4 chr2 + 5655 1 novel_in_catalog TBC1D23 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 41 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.87.1 chr1 + 6105 19 incomplete-splice_match VPS13D rna456 14663 70 10518 -1960 internal_fragment FALSE canonical 37 387 2314 216.497113145 2 5 0 FALSE 0 0 NA A coding 930 2790 27 2816 15 PB.10029.2 chr16 + 5377 32 novel_not_in_catalog TMEM94 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 25 59 470 87.8692210049 7 2 0 TRUE 0 0 NA B coding 1356 4068 199 4266 35 PB.10029.3 chr16 + 2768 2 genic TMEM94 novel NA NA NA NA no_subcategory FALSE canonical 30 123 94 NA 2 2 0 TRUE 0 0 NA B non_coding NA NA NA NA 90 PB.6852.3 chr11 - 2020 1 genic_intron novelGene_622 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.10029.4 chr16 + 5390 32 novel_not_in_catalog TMEM94 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1593 93.139680051 5 1 0 TRUE 0 0 NA B coding 1359 4077 199 4275 20 PB.5172.91 chr7 + 1570 10 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 188 3385.38638858 2 21 0 TRUE 0 0 NA B coding 196 588 849 1436 15 PB.1697.2 chr2 - 3186 13 novel_in_catalog EIF2B5 novel NA NA NA NA combination_of_known_junctions TRUE canonical 46 603 215 198.615205863 2 17 0 FALSE 0 0 NA C coding 645 1935 21 1955 10 PB.1697.1 chr2 - 2533 16 full-splice_match EIF2B5 rna9078 2535 16 -2 4 multi-exon FALSE canonical 46 603 202 212.035374407 17 0 0 FALSE 0 0 NA C coding 721 2163 8 2170 5 PB.604.12 chr1 + 2550 1 genic CD53 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA C non_coding NA NA NA NA 95 PB.604.10 chr1 + 2695 5 novel_not_in_catalog CD53 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2674 1246.38838249 2 1 0 TRUE 0 0 NA C non_coding NA NA NA NA 20 PB.1906.5 chr2 - 3925 26 incomplete-splice_match TOP2B rna10202 5194 36 1256 13 5prime_fragment FALSE canonical 48 1523 1795 728.307627311 2 2 0 FALSE 0 0 NA B coding 1104 3312 299 3610 55 PB.3235.1 chr4 - 4045 6 full-splice_match DSE rna17612 7016 6 1 2970 multi-exon FALSE canonical 32 144 193 103.339247143 2 2 0 FALSE 0 0 NA A coding 958 2874 247 3120 15 PB.4339.1 chr6 + 4107 32 full-splice_match CDHR2 rna23412 4321 32 13 201 multi-exon FALSE canonical 2 8 1265 25.5147016443 17 2 0 FALSE 0 0 NA A coding 1310 3930 72 4001 20 PB.9993.1 chr16 - 3928 2 novel_in_catalog LOC106994123 novel NA NA NA NA combination_of_known_junctions FALSE canonical 20 31 605 NA 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.4202.1 chr6 + 2838 1 antisense novelGene_HARS_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.733.5 chr1 + 2855 5 novel_in_catalog CHTOP novel NA NA NA NA combination_of_known_junctions TRUE canonical 46 257 2138 138.097791438 18 3 0 FALSE 0 0 NA C coding 223 669 1995 2663 5 PB.4266.9 chr6 - 5616 1 novel_in_catalog CCDC69 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 11 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.11199.1 chr19 - 3684 1 novel_in_catalog ZNF586 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 8 2 NA FALSE 0 0 NA A coding 358 1074 643 1716 75 PB.6506.1 chr10 + 1568 2 intergenic novelGene_1397 novel NA NA NA NA no_subcategory FALSE canonical 37 262 41 NA 13 6 0 FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.1020.2 chr1 - 1910 9 full-splice_match TROVE2 rna5611 3236 9 209 1117 multi-exon FALSE canonical 48 311 141 418.395745676 18 1 0 FALSE 0 0 NA C coding 538 1614 161 1774 85 PB.1020.1 chr1 - 2256 10 full-splice_match TROVE2 rna5613 3474 10 99 1119 multi-exon FALSE canonical 20 29 142 470.338176209 3 1 0 FALSE 0 0 NA C coding 538 1614 509 2122 85 PB.2652.2 chr3 - 3330 1 genic_intron novelGene_2558 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 12 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.2079.1 chr3 - 1444 1 genic_intron novelGene_307 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.4266.3 chr6 - 1915 1 incomplete-splice_match CCDC69 rna23075 3166 9 1248 4 mono-exon FALSE canonical NA NA NA NA 5 0 NA FALSE 0 0 NA B non_coding NA NA NA NA 10 PB.2300.1 chr3 - 1795 6 full-splice_match CBX3 rna12331 611 6 -70 -1114 multi-exon FALSE canonical 43 1569 88 1240.55874508 18 1 0 FALSE 0 0 NA A coding 183 549 117 665 30 PB.8897.41 chr14 + 5956 1 novel_in_catalog SORL1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 13 NA FALSE 0 0 NA C coding 114 342 3689 4030 60 PB.8897.42 chr14 + 1379 1 incomplete-splice_match SORL1 rna48281 10896 48 9495 23 mono-exon FALSE canonical NA NA NA NA 50 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 50 PB.9104.1 chr15 - 3076 1 genic_intron novelGene_327 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5500.1 chr8 - 3167 1 genic_intron novelGene_1991 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.9487.1 chr16 + 3579 22 incomplete-splice_match MINK1 rna51521 4220 33 1415 -774 internal_fragment FALSE canonical 10 12 983 142.797058793 2 0 0 FALSE 0 0 NA A coding 907 2721 82 2802 20 PB.2388.1 chr3 - 1328 4 full-splice_match BET1 rna12884 745 4 63 -646 multi-exon FALSE canonical 46 558 109 93.252345815 17 1 0 FALSE 0 0 NA C coding 118 354 91 444 80 PB.1025.1 chr1 + 2574 10 full-splice_match PTGS2 rna5663 4772 10 258 1940 multi-exon FALSE canonical 17 23 185 33.3166624979 2 3 0 FALSE 0 0 NA A coding 604 1812 134 1945 40 PB.10480.1 chr18 - 2745 14 full-splice_match NARS rna56768 2779 14 23 11 multi-exon FALSE canonical 47 1985 1135 618.138334032 199 1 0 FALSE 0 0 NA A coding 547 1641 138 1778 25 PB.8645.1 chr14 - 1698 13 full-splice_match ILK rna46956 1773 13 62 13 multi-exon FALSE canonical 39 468 44 804.553292206 157 0 0 FALSE 0 0 NA C coding 452 1356 91 1446 35 PB.6044.3 chr9 + 1740 1 genic PDCD4 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 35 PB.8645.3 chr14 - 1805 13 full-splice_match ILK rna46958 1752 13 -60 7 multi-exon FALSE canonical 24 51 148 885.158742825 2 6 0 FALSE 0 0 NA C coding 452 1356 195 1550 30 PB.9413.5 chr15 + 3427 17 full-splice_match SECISBP2 rna51170 3503 17 65 11 multi-exon FALSE canonical 41 128 70 321.759226752 5 2 0 FALSE 0 0 NA C coding 856 2568 35 2602 30 PB.8645.5 chr14 - 1975 2 novel_in_catalog ILK novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 468 53 NA 2 2 0 FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.3249.1 chr4 + 3208 1 intergenic novelGene_2394 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.9993.3 chr16 - 2972 1 genic_intron novelGene_1318 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 10 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.3495.1 chr5 - 1160 4 full-splice_match CXCL13 rna18943 330 4 -46 -784 multi-exon FALSE canonical 4 200 324 29.4957624075 17 3 0 FALSE 0 0 NA A coding 109 327 47 373 25 PB.8690.1 chr14 - 1747 1 antisense novelGene_RELT_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA A coding 134 402 61 462 90 PB.1476.1 chr2 + 1467 10 novel_not_in_catalog FAM3D novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 253 5.09901951359 5 1 0 FALSE 0 0 NA C coding 236 708 423 1130 25 PB.5446.1 chr8 - 2972 1 antisense novelGene_ESRP1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.11206.1 chr19 - 2725 4 full-splice_match ZNF547 rna60718 1906 4 -121 -698 multi-exon FALSE canonical 20 28 147 64.5058136915 2 3 0 FALSE 0 0 NA A coding 402 1206 160 1365 40 PB.1558.12 chr2 + 3432 1 novel_in_catalog LOC706930 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A coding 133 399 2455 2853 75 PB.563.1 chr1 + 1745 11 full-splice_match SLC30A7 rna3090 1656 11 17 -106 multi-exon FALSE canonical 42 322 1231 145.945195193 19 1 0 FALSE 0 0 NA A coding 376 1128 149 1276 90 PB.4669.1 chr7 + 2973 1 novel_in_catalog FBXO22 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 5 NA FALSE 0 0 NA A coding 109 327 2114 2440 75 PB.733.3 chr1 + 2728 4 novel_in_catalog CHTOP novel NA NA NA NA combination_of_known_junctions FALSE canonical 30 51 2332 205.175534604 2 10 0 FALSE 0 0 NA C coding 177 531 2005 2535 5 PB.5172.159 chr7 + 1549 10 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 185 3385.38638858 2 12 0 TRUE 0 0 NA B coding 196 588 826 1413 15 PB.4835.1 chr7 - 1870 17 full-splice_match RABGGTA rna26192 2083 17 196 17 multi-exon FALSE canonical 23 53 52 80.9258920247 7 4 0 FALSE 0 0 NA A coding 567 1701 107 1807 20 PB.3955.1 chr6 - 2959 3 full-splice_match CD180 rna21529 2817 3 148 -290 multi-exon FALSE canonical 33 254 196 10 16 1 0 FALSE 0 0 NA A coding 661 1983 107 2089 35 PB.9704.1 chr16 - 3205 4 full-splice_match SMG8 rna52620 3315 4 25 85 multi-exon FALSE canonical 45 280 1922 77.6079892795 22 8 0 FALSE 0 0 NA A coding 991 2973 18 2990 65 PB.3651.2 chr5 - 3721 23 full-splice_match SEC24D rna19857 4076 23 24 331 multi-exon FALSE canonical 18 32 206 214.972091212 12 8 0 FALSE 0 0 NA C coding 1032 3096 248 3343 55 PB.2378.2 chr3 + 3116 1 genic_intron novelGene_2028 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.9039.2 chr15 + 1738 3 full-splice_match PTGES rna49121 1009 3 -8 -721 multi-exon FALSE canonical 30 85 160 24 5 1 0 FALSE 0 0 NA A coding 152 456 35 490 15 PB.6307.1 chr10 - 2604 1 antisense novelGene_EIF2S2_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A coding 112 336 1156 1491 90 PB.7196.1 chr11 - 1855 1 full-splice_match LOC699195 rna39077 2261 1 405 1 mono-exon FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A coding 80 240 114 353 50 PB.12067.2 chrX + 2795 7 novel_in_catalog SASH3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 28 118 1245 204.609383949 4 5 0 FALSE 0 0 NA B coding 268 804 148 951 30 PB.12067.3 chrX + 2926 6 novel_in_catalog SASH3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 28 118 1381 219.271521179 3 2 0 FALSE 0 0 NA B coding 254 762 136 897 35 PB.2482.1 chr3 - 3060 10 full-splice_match PNPLA8 rna13429 4238 10 1164 14 multi-exon FALSE canonical 42 278 97 376.903170589 20 0 0 FALSE 0 0 NA C coding 782 2346 181 2526 45 PB.8782.1 chr14 + 2832 2 full-splice_match JRKL rna47713 3155 2 22 301 multi-exon FALSE canonical 29 90 61 NA 21 1 0 FALSE 0 0 NA C coding 524 1572 229 1800 35 PB.4367.1 chr6 - 3515 1 genic_intron novelGene_2556 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.9993.2 chr16 - 2859 1 genic_intron novelGene_1315 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A coding 147 441 537 977 60 PB.4800.6 chr7 - 2869 8 novel_not_in_catalog HNRNPC novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 131 4697.47974982 3 1 1 FALSE 0 0 NA C coding 293 879 176 1054 25 PB.4855.1 chr7 - 1271 2 full-splice_match SPTSSA rna26316 2608 2 113 1224 multi-exon FALSE canonical 47 541 148 NA 16 0 0 FALSE 0 0 NA A non_coding NA NA NA NA 50 PB.8633.2 chr14 + 1629 4 novel_in_catalog TMEM9B novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 13 16 220 977.874736354 6 1 0 FALSE 0 0 NA C coding 124 372 246 617 30 PB.8992.1 chr15 + 2131 1 incomplete-splice_match BRD3 rna48918 5592 12 3430 32 mono-exon FALSE canonical NA NA NA NA 5 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 85 PB.2558.2 chr3 - 1777 1 genic_intron novelGene_2412 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.10009.1 chr16 - 1744 7 full-splice_match CD300LF rna54188 1864 7 105 15 multi-exon FALSE canonical 29 171 655 49.5681349256 9 4 0 FALSE 0 0 NA A coding 291 873 97 969 40 PB.4800.4 chr7 - 3160 9 novel_not_in_catalog HNRNPC novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 536 4540.95353423 3 4 0 TRUE 0 0 NA C coding 171 513 593 1105 40 PB.6602.1 chr10 + 2605 4 full-splice_match APOBEC3C rna36008 573 4 -69 -1963 multi-exon FALSE canonical 42 251 523 93.6482781475 45 5 0 FALSE 0 0 NA A coding 190 570 70 639 35 PB.2770.28 chr4 - 1733 1 genic_intron novelGene_566 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 18 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.6602.3 chr10 + 1552 1 genic_intron novelGene_1568 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A coding 123 369 306 674 35 PB.7322.1 chr11 + 6257 5 full-splice_match MLEC rna39568 6541 5 277 7 multi-exon FALSE canonical 43 1388 377 299.365996733 8 8 0 FALSE 0 0 NA C coding 291 873 146 1018 20 PB.7989.1 chr13 - 1079 6 full-splice_match CALM2 rna43349 1708 6 577 52 multi-exon FALSE canonical 48 19007 71 10041.4313223 50 1 0 FALSE 0 0 NA A coding 149 447 69 515 25 PB.5172.575 chr7 + 1515 5 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 11 130 389 3285.07945109 2 0 0 TRUE 0 0 NA B coding 196 588 800 1387 15 PB.9497.1 chr16 - 1515 12 incomplete-splice_match NUP88 rna51568 2492 17 971 6 5prime_fragment TRUE canonical 36 957 500 193.788544553 2 0 0 FALSE 0 0 NA A coding 443 1329 13 1341 25 PB.11291.1 chr20 + 1933 10 full-splice_match CCDC64B rna61253 2019 10 27 59 multi-exon FALSE canonical 0 0 336 3.74165738677 3 0 0 FALSE 0 0 NA A coding 508 1524 55 1578 50 PB.10188.1 chr17 - 2902 1 antisense novelGene_PDS5B_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.633.1 chr1 + 1745 3 full-splice_match OLFML3 rna3425 1741 3 -3 -1 multi-exon FALSE canonical 31 673 163 76 10 0 0 FALSE 0 0 NA A coding 406 1218 50 1267 10 PB.6185.1 chr10 + 5585 3 incomplete-splice_match ADNP rna33772 4645 5 331 -1271 internal_fragment FALSE canonical 38 240 39 69 2 2 0 FALSE 0 0 NA B coding 875 2625 616 3240 35 PB.11536.1 chr20 - 6198 1 genic_intron novelGene_872 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 10 NA FALSE 0 0 NA A coding 173 519 3843 4361 90 PB.5753.1 chr9 - 2739 5 novel_in_catalog ZNF248 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 23 45 72 338.740313515 3 0 0 FALSE 0 0 NA A coding 31 93 319 411 20 PB.6185.2 chr10 + 2670 1 genic ADNP novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 8 7 NA FALSE 0 0 NA B coding 84 252 75 326 35 PB.6751.2 chr11 - 1166 3 novel_in_catalog SPSB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 27 63 54 30.495901364 2 1 0 FALSE 0 0 NA A coding 156 468 139 606 40 PB.2761.1 chr4 + 3218 16 full-splice_match CDKAL1 rna14802 4426 16 43 1165 multi-exon FALSE canonical 42 189 1701 284.153127732 2 1 0 FALSE 0 0 NA A coding 576 1728 154 1881 35 PB.5172.352 chr7 + 1561 8 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 375 3623.1896169 4 12 0 TRUE 0 0 NA B coding 463 1389 38 1426 15 PB.6203.2 chr10 + 5831 40 novel_not_in_catalog PREX1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1364 388.546007572 3 7 0 TRUE 0 0 NA B coding 1182 3546 1460 5005 75 PB.291.82 chr1 - 1033 1 genic_intron novelGene_793 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 2 NA FALSE 0 0 NA A coding 126 378 204 581 80 PB.2292.2 chr3 + 3106 2 intergenic novelGene_1560 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 91 NA 4 5 1 FALSE 0 0 NA A coding 115 345 1793 2137 80 PB.3512.8 chr5 + 2438 1 incomplete-splice_match G3BP2 rna19013 4122 11 1682 3 mono-exon FALSE canonical NA NA NA NA 6 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.2322.1 chr3 - 2233 3 full-splice_match MEOX2 rna12473 2502 3 262 7 multi-exon FALSE canonical 16 125 668 7.48331477355 3 2 0 FALSE 0 0 NA A coding 268 804 260 1063 25 PB.4088.1 chr6 - 3790 3 full-splice_match FEM1C rna22181 3586 3 54 -258 multi-exon FALSE canonical 44 254 150 193.499354004 4 1 0 FALSE 0 0 NA A coding 617 1851 341 2191 40 PB.747.8 chr1 + 2903 10 novel_not_in_catalog IL6R novel NA NA NA NA any annotated donor/acceptor FALSE canonical 4 5 867 254.42091109 2 5 0 FALSE 0 0 NA C coding 308 924 492 1415 75 PB.3512.3 chr5 + 4139 11 full-splice_match G3BP2 rna19009 3758 11 154 -535 multi-exon FALSE canonical 48 494 98 1204.16153401 96 1 0 FALSE 0 0 NA C coding 449 1347 123 1469 25 PB.8744.2 chr14 + 5860 16 full-splice_match PCF11 rna47441 6027 16 161 6 multi-exon FALSE canonical 48 492 477 322.820383495 8 5 0 FALSE 0 0 NA C coding 1555 4665 286 4950 30 PB.3512.1 chr5 + 4201 11 novel_in_catalog G3BP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 524 147 1198.10183207 3 0 0 FALSE 0 0 NA C coding 449 1347 172 1518 20 PB.3512.6 chr5 + 4153 12 novel_not_in_catalog G3BP2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 84 1498.27167096 2 3 0 TRUE 0 0 NA C coding 449 1347 120 1466 25 PB.3512.7 chr5 + 4135 11 novel_in_catalog G3BP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 403 81 1222.76449082 2 2 0 FALSE 0 0 NA C coding 449 1347 106 1452 20 PB.3512.4 chr5 + 4332 12 full-splice_match G3BP2 rna19008 4937 12 603 2 multi-exon FALSE canonical 44 494 171 1303.78794288 9 2 0 FALSE 0 0 NA C coding 482 1446 196 1641 30 PB.3512.5 chr5 + 1984 4 novel_in_catalog G3BP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 494 207 1043.63691004 3 0 0 FALSE 0 0 NA C coding 135 405 232 636 95 PB.11083.2 chr19 + 1662 10 full-splice_match SNRNP70 rna59904 1681 10 9 10 multi-exon FALSE canonical 45 373 858 2768.58555945 13 0 0 FALSE 0 0 NA C coding 437 1311 194 1504 15 PB.9750.1 chr16 + 2938 3 novel_in_catalog FAM117A novel NA NA NA NA combination_of_known_junctions FALSE canonical 38 296 1712 9.48683298051 3 2 0 FALSE 0 0 NA B coding 181 543 1468 2010 30 PB.9750.2 chr16 + 2830 2 novel_in_catalog FAM117A novel NA NA NA NA combination_of_known_junctions FALSE canonical 42 315 1157 NA 2 4 0 FALSE 0 0 NA B coding 117 351 972 1322 15 PB.9750.3 chr16 + 1842 1 novel_in_catalog FAM117A novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 25 PB.10240.2 chr17 - 1582 2 novel_not_in_catalog ESD novel NA NA NA NA not any annotated donor/acceptor FALSE non_canonical 0 0 125 NA 2 3 0 TRUE 0 0 NA C non_coding NA NA NA NA 95 PB.10240.1 chr17 - 1118 10 full-splice_match ESD rna55275 1059 10 21 -80 multi-exon FALSE canonical 45 2106 371 588.800475543 5 1 0 FALSE 0 0 NA C coding 282 846 116 961 30 PB.6231.1 chr10 + 2625 5 full-splice_match SDC4 rna33977 1514 5 -2 -1109 multi-exon FALSE canonical 28 363 92 396.717783821 2 6 0 FALSE 0 0 NA C coding 198 594 33 626 15 PB.5971.1 chr9 - 2632 15 full-splice_match CRTAC1 rna32549 2694 15 56 6 multi-exon FALSE canonical 6 18 140 37.9868398264 6 1 0 FALSE 0 0 NA A coding 659 1977 117 2093 15 PB.6203.3 chr10 + 2612 1 genic_intron novelGene_359 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.11083.4 chr19 + 4124 10 novel_not_in_catalog SNRNP70 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 43 292 3339 2775.13314996 4 0 0 FALSE 0 0 NA C coding 122 366 3593 3958 5 PB.9351.1 chr15 - 1813 8 full-splice_match SMARCA2 rna50822 1864 8 2 49 multi-exon FALSE canonical 21 41 139 1146.87793596 2 1 0 FALSE 0 0 NA C coding 276 828 143 970 20 PB.1390.2 chr2 + 2668 1 antisense novelGene_SLC6A6_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA A coding 149 447 1653 2099 90 PB.9351.3 chr15 - 6163 1 novel_in_catalog SMARCA2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 19 NA FALSE 0 0 NA C coding 120 360 2393 2752 70 PB.6972.2 chr11 - 2924 10 novel_in_catalog SPRYD3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 37 292 313 252.057533115 2 9 0 FALSE 0 0 NA C coding 365 1095 610 1704 20 PB.262.1 chr1 + 2213 12 full-splice_match RBBP4 rna1334 2474 12 131 130 multi-exon FALSE canonical 45 1799 23 1110.69212656 12 2 0 FALSE 0 0 NA A coding 425 1275 8 1282 30 PB.1923.1 chr2 + 3264 4 full-splice_match CMTM6 rna10324 3218 4 -6 -40 multi-exon FALSE canonical 47 1264 191 623.687421711 190 2 0 FALSE 0 0 NA C coding 183 549 54 602 25 PB.11083.6 chr19 + 1642 10 full-splice_match SNRNP70 rna59903 1914 10 264 8 multi-exon FALSE canonical 43 292 865 2781.8727505 3 1 0 FALSE 0 0 NA C coding 428 1284 201 1484 15 PB.6972.1 chr11 - 2614 11 full-splice_match SPRYD3 rna37962 2910 11 17 279 multi-exon FALSE canonical 37 292 314 239.261363367 117 2 0 FALSE 0 0 NA C coding 431 1293 102 1394 20 PB.9977.2 chr16 + 2989 6 novel_in_catalog BPTF novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 22 80 1032 689.157456609 2 0 0 FALSE 0 0 NA B coding 446 1338 15 1352 80 PB.5951.7 chr9 - 2836 1 novel_in_catalog BLNK novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA C coding 112 336 1175 1510 85 PB.5951.6 chr9 - 2845 5 novel_not_in_catalog BLNK novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2142 78.4219357068 2 11 0 TRUE 0 0 NA C coding 103 309 753 1061 70 PB.5951.5 chr9 - 1526 7 novel_in_catalog BLNK novel NA NA NA NA combination_of_known_junctions FALSE canonical 25 123 645 32.8481354113 4 0 0 FALSE 0 0 NA C coding 208 624 121 744 75 PB.6524.2 chr10 - 2626 16 full-splice_match SF3A1 rna35614 4617 16 8 1983 multi-exon FALSE canonical 22 62 2061 175.965905789 144 0 0 FALSE 0 0 NA C coding 793 2379 111 2489 25 PB.9977.1 chr16 + 2651 10 incomplete-splice_match BPTF rna54060 11265 31 338 8276 internal_fragment FALSE canonical 45 571 1742 477.617001372 2 2 0 FALSE 0 0 NA B coding 848 2544 107 2650 80 PB.5951.1 chr9 - 1537 17 full-splice_match BLNK rna32464 1829 17 23 269 multi-exon FALSE canonical 19 105 1422 46.0543157587 23 0 0 FALSE 0 0 NA C coding 455 1365 172 1536 75 PB.3003.1 chr4 + 2953 6 incomplete-splice_match PHF3 rna16409 7275 16 11 4311 3prime_fragment FALSE canonical 41 317 320 755.412470112 2 0 0 FALSE 0 0 NA B coding 869 2607 346 2952 70 PB.11436.1 chr20 - 2960 10 novel_in_catalog SH2B1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 7 8 40 109.795264014 4 3 0 FALSE 0 0 NA B coding 438 1314 891 2204 10 PB.1717.1 chr2 + 3145 10 full-splice_match GNB4 rna9188 2855 10 -31 -259 multi-exon FALSE canonical 31 98 80 147.780242252 13 0 0 FALSE 0 0 NA A coding 340 1020 123 1142 80 PB.3003.2 chr4 + 2816 1 novel_in_catalog PHF3 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 80 PB.4171.1 chr6 - 1558 1 genic_intron novelGene_2246 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 55 PB.5296.1 chr8 - 2727 1 genic WHSC1L1 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 95 PB.5951.8 chr9 - 5714 2 novel_in_catalog BLNK novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 220 167 NA 2 11 0 FALSE 0 0 NA C coding 112 336 4054 4389 80 PB.5743.1 chr9 + 3625 1 intergenic novelGene_748 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5793.2 chr9 - 1555 6 full-splice_match FAM213A rna31553 1145 6 131 -541 multi-exon FALSE canonical 31 253 32 1003.82817255 4 3 0 FALSE 0 0 NA C coding 218 654 51 704 35 PB.880.1 chr1 + 2826 1 genic_intron novelGene_2293 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 45 PB.5172.570 chr7 + 1494 7 fusion LOC720839_LOC711872 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 388 2349.70466229 13 4 0 TRUE 0 0 NA B coding 245 735 707 1441 10 PB.8698.1 chr14 - 2542 14 full-splice_match PGM2L1 rna47282 2532 14 -28 18 multi-exon FALSE canonical 44 335 702 137.822349421 10 0 0 FALSE 0 0 NA A coding 622 1866 317 2182 75 PB.6739.2 chr11 - 2866 9 novel_not_in_catalog IFFO1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 5 5 347 195.811133493 2 0 0 FALSE 0 0 NA B coding 200 600 1319 1918 20 PB.10211.1 chr17 - 1335 1 genic_intron novelGene_453 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.486.1 chr1 + 5653 7 novel_in_catalog IFI44 novel NA NA NA NA combination_of_known_junctions FALSE canonical 42 488 5180 244.48721848 7 3 0 FALSE 0 0 NA C coding 237 711 132 842 35 PB.6739.1 chr11 - 2766 11 novel_not_in_catalog IFFO1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 759 210.959711794 2 1 0 TRUE 0 0 NA B coding 199 597 1217 1813 10 PB.10176.3 chr17 - 3486 17 full-splice_match HSPH1 rna54948 3567 17 76 5 multi-exon FALSE canonical 24 110 1939 498.095372394 5 3 0 FALSE 0 0 NA C coding 814 2442 356 2797 25 PB.10176.2 chr17 - 3554 18 full-splice_match HSPH1 rna54947 4062 18 502 6 multi-exon FALSE canonical 38 917 399 359.994444402 78 0 0 FALSE 0 0 NA C coding 858 2574 293 2866 20 PB.2749.1 chr4 - 4364 1 genic_intron novelGene_399 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.9997.1 chr16 + 3684 5 full-splice_match C16H17orf80 rna54144 2855 5 78 -907 multi-exon FALSE canonical 39 359 43 200.227370756 27 1 0 FALSE 0 0 NA C coding 567 1701 178 1878 50 PB.9625.2 chr16 - 2512 12 full-splice_match PIGS rna52293 3086 12 566 8 multi-exon FALSE canonical 16 32 65 341.313638755 30 0 0 FALSE 0 0 NA A coding 555 1665 32 1696 40 PB.4321.16 chr6 - 7126 13 novel_not_in_catalog STK10 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 3687 272.539905335 2 28 0 FALSE 0 0 NA B coding 314 942 170 1111 85 PB.1840.6 chr2 - 2890 1 genic_intron novelGene_2450 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.322.4 chr1 + 2382 1 genic_intron novelGene_856 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 55 PB.7099.4 chr11 - 3468 9 full-splice_match CPM rna38539 2734 9 -116 -618 multi-exon FALSE canonical 5 7 147 126.530628703 2 3 0 FALSE 0 0 NA C coding 443 1329 151 1479 35 PB.7159.3 chr11 + 5819 1 genic_intron novelGene_1748 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.7099.1 chr11 - 2731 9 full-splice_match CPM rna38538 3382 9 23 628 multi-exon FALSE canonical 29 169 29 83.6600262969 75 2 0 FALSE 0 0 NA C coding 443 1329 33 1361 80 PB.7099.2 chr11 - 3329 10 novel_not_in_catalog CPM novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 3302 127.960931538 16 3 0 TRUE 0 0 NA C coding 443 1329 34 1362 35 PB.7159.6 chr11 + 2829 1 novel_in_catalog PLXNC1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 29 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.9258.9 chr15 - 1983 4 novel_in_catalog GLIPR2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 37 1353 58 423.464284208 5 12 0 FALSE 0 0 NA C coding 129 387 46 432 70 PB.6311.1 chr10 - 3346 15 novel_not_in_catalog ZNF341 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1889 30.6431068921 2 14 0 FALSE 0 0 NA B coding 664 1992 28 2019 20 PB.6311.2 chr10 - 3321 15 novel_not_in_catalog ZNF341 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1866 31.2729915422 2 18 1 FALSE 0 0 NA B coding 657 1971 26 1996 20 PB.5760.2 chr9 - 3422 4 full-splice_match CXCL12 rna31267 3545 4 12 111 multi-exon FALSE canonical 25 928 350 1399.03609675 80 7 0 FALSE 0 0 NA C coding 93 279 85 363 45 PB.151.1 chr1 + 1006 3 full-splice_match C1QA rna807 1140 3 130 4 multi-exon FALSE canonical 31 636 232 465 14 1 0 FALSE 0 0 NA A coding 245 735 70 804 20 PB.5760.4 chr9 - 1624 4 full-splice_match CXCL12 rna31269 3065 4 12 1429 multi-exon FALSE canonical 25 305 350 1575.48246579 3 1 0 FALSE 0 0 NA C coding 119 357 85 441 40 PB.3131.2 chr4 - 1622 8 full-splice_match PCMT1 rna17069 2228 8 589 17 multi-exon FALSE canonical 48 1390 834 1018.89646186 44 2 0 FALSE 0 0 NA C coding 228 684 161 844 50 PB.9258.1 chr15 - 1551 6 genic_intron novelGene_1000 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 1451 0 2 3 0 FALSE 0 0 NA A coding 70 210 147 356 80 PB.9258.3 chr15 - 1060 5 full-splice_match CLTA rna50194 1130 5 60 10 multi-exon FALSE canonical 46 945 352 3073.24730538 18 0 0 FALSE 0 0 NA C coding 218 654 136 789 35 PB.1043.6 chr1 - 5719 22 novel_not_in_catalog SMG7 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 287 194.540484219 2 10 0 FALSE 0 0 NA C coding 756 2268 1175 3442 30 PB.10951.2 chr19 + 823 1 incomplete-splice_match ZFP36 rna59160 1785 2 478 485 mono-exon FALSE canonical NA NA NA NA 23 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.10268.4 chr17 + 1863 1 antisense novelGene_DHRS12_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 9 2 NA FALSE 0 0 NA A coding 117 351 101 451 10 PB.9258.7 chr15 - 970 5 full-splice_match GLIPR2 rna50201 1854 5 -11 895 multi-exon TRUE canonical 37 1353 67 448.518672967 194 0 0 FALSE 0 0 NA C coding 154 462 55 516 50 PB.10951.1 chr19 + 1757 2 full-splice_match ZFP36 rna59160 1785 2 23 5 multi-exon FALSE canonical 25 87 83 NA 54 2 0 FALSE 0 0 NA C coding 332 996 42 1037 15 PB.1552.1 chr2 - 1992 19 novel_not_in_catalog APEH novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 612 388.09663745 2 0 0 TRUE 0 0 NA B coding 313 939 895 1833 15 PB.5780.9 chr9 - 3459 10 novel_not_in_catalog NCOA4 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 93 2930.93432202 231 3 1 TRUE 0 0 NA C coding 615 1845 109 1953 15 PB.9639.1 chr16 - 3870 1 novel_in_catalog SEZ6 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A coding 102 306 3067 3372 85 PB.322.3 chr1 + 2478 1 genic_intron novelGene_854 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.5780.3 chr9 - 3343 9 novel_in_catalog NCOA4 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical 17 57 112 3090.83597106 2 0 0 FALSE 0 0 NA C coding 449 1347 470 1816 40 PB.5780.2 chr9 - 3465 10 full-splice_match NCOA4 rna31426 3558 10 88 5 multi-exon FALSE canonical 48 2553 102 2259.2981211 26 3 0 FALSE 0 0 NA C coding 615 1845 117 1961 15 PB.11834.1 chrX + 1739 8 full-splice_match TSPAN7 rna63638 1750 8 23 -12 multi-exon FALSE canonical 29 1283 273 550.149979551 59 0 0 FALSE 0 0 NA A coding 244 732 19 750 5 PB.1763.1 chr2 + 2733 1 genic_intron novelGene_2229 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.311.3 chr1 + 3777 25 incomplete-splice_match MACF1 rna1578 17652 93 11322 2553 internal_fragment FALSE canonical 45 1357 634 509.420258726 2 1 0 FALSE 0 0 NA B coding 1248 3744 32 3775 65 PB.311.1 chr1 + 6607 39 novel_in_catalog MACF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 842 5615 652.915767921 2 5 0 FALSE 0 0 NA B coding 2095 6285 45 6329 90 PB.5780.4 chr9 - 3409 10 incomplete-splice_match NCOA4 rna31429 2674 11 80 -815 5prime_fragment FALSE canonical 46 400 54 2821.19602297 4 1 1 FALSE 0 0 NA C coding 615 1845 69 1913 30 PB.5945.1 chr9 - 1460 7 full-splice_match PDLIM1 rna32402 1765 7 296 9 multi-exon FALSE canonical 23 117 216 66.2344321331 123 0 0 FALSE 0 0 NA A coding 330 990 121 1110 20 PB.1340.8 chr2 + 3572 10 novel_not_in_catalog PARP14 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 2 2438 436.853522362 2 3 0 FALSE 0 0 NA C coding 652 1956 26 1981 70 PB.3680.1 chr5 + 1547 6 incomplete-splice_match C5H4orf33 rna20034 2010 7 455 8 internal_fragment FALSE canonical 32 172 307 92.0869154658 2 2 0 FALSE 0 0 NA A coding 204 612 66 677 30 PB.10891.1 chr19 + 2780 1 intergenic novelGene_717 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A coding 107 321 2053 2373 75 PB.1340.4 chr2 + 6188 7 novel_in_catalog PARP14 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 794 3103 345.249185372 5 3 0 FALSE 0 0 NA C coding 1162 3486 26 3511 90 PB.1340.3 chr2 + 4696 14 incomplete-splice_match PARP14 rna7180 7820 17 301 2823 3prime_fragment FALSE canonical 44 680 3340 347.279426399 9 0 0 FALSE 0 0 NA C coding 1557 4671 26 4696 70 PB.1340.2 chr2 + 5640 8 novel_in_catalog PARP14 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 680 3340 389.186330695 14 0 0 FALSE 0 0 NA C coding 1189 3567 26 3592 90 PB.1340.1 chr2 + 6682 17 full-splice_match PARP14 rna7180 7820 17 301 837 multi-exon FALSE canonical 44 680 3340 316.363714734 24 1 0 FALSE 0 0 NA C coding 1800 5400 26 5425 40 PB.3271.1 chr4 - 1609 10 full-splice_match TAGAP rna17764 4777 10 1056 2112 multi-exon FALSE canonical 32 217 758 66.4153596693 77 0 0 FALSE 0 0 NA C coding 479 1437 172 1608 40 PB.8028.1 chr13 + 1454 9 full-splice_match AHSA2 rna43553 1916 9 86 376 multi-exon FALSE canonical 41 221 180 361.192469467 12 1 0 FALSE 0 0 NA A coding 334 1002 101 1102 15 PB.11453.3 chr20 - 1548 10 novel_in_catalog SEPT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 24 138 1076 243.380360752 31 5 1 FALSE 0 0 NA C coding 192 576 676 1251 10 PB.11453.1 chr20 - 1429 11 full-splice_match SEPT1 rna61911 1761 11 325 7 multi-exon FALSE canonical 24 138 957 234.910621301 139 0 0 FALSE 0 0 NA C coding 372 1116 17 1132 10 PB.11453.6 chr20 - 1052 6 novel_in_catalog SEPT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 24 346 36 213.197091913 2 0 0 FALSE 0 0 NA C coding 187 561 19 579 85 PB.5784.1 chr9 + 3391 1 full-splice_match LOC695569 rna31471 3746 1 -1223 1578 mono-exon FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A coding 114 342 1766 2107 75 PB.11453.4 chr20 - 1360 11 novel_not_in_catalog SEPT1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 969 325.918701519 2 5 2 TRUE 0 0 NA C coding 174 522 479 1000 10 PB.11453.5 chr20 - 1371 11 novel_not_in_catalog SEPT1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 78 274.065685557 2 3 0 TRUE 0 0 NA C coding 192 576 521 1096 40 PB.159.1 chr1 - 4010 3 full-splice_match ZNF436 rna836 4288 3 274 4 multi-exon FALSE canonical 37 394 109 184 2 2 0 FALSE 0 0 NA A coding 469 1407 77 1483 40 PB.6051.1 chr9 + 2602 14 novel_not_in_catalog TCF7L2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 654 30.8058436015 2 36 0 TRUE 0 0 NA B coding 449 1347 919 2265 90 PB.4377.1 chr6 + 5779 2 genic_intron novelGene_2567 novel NA NA NA NA no_subcategory TRUE canonical 0 0 1555 NA 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA 45 PB.12051.1 chrX - 1556 9 novel_not_in_catalog NKAP novel NA NA NA NA any annotated donor/acceptor TRUE canonical 44 279 533 130.854881453 2 3 0 TRUE 0 0 NA A coding 417 1251 148 1398 40 PB.5448.1 chr8 + 1452 1 novel_in_catalog INTS8 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 10 1 NA FALSE 0 0 NA C coding 185 555 137 691 80 PB.5448.2 chr8 + 3197 27 full-splice_match INTS8 rna29569 3386 27 16 173 multi-exon FALSE canonical 43 442 256 329.529968288 24 1 0 FALSE 0 0 NA C coding 995 2985 127 3111 30 PB.5448.3 chr8 + 3092 26 full-splice_match INTS8 rna29568 3149 26 38 19 multi-exon FALSE canonical 38 150 1782 380.381387557 2 3 0 FALSE 0 0 NA C coding 958 2874 142 3015 50 PB.11090.1 chr19 + 1456 7 novel_not_in_catalog FCGRT novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 178 961.447346452 161 11 0 TRUE 0 0 NA A coding 225 675 568 1242 25 PB.2511.1 chr3 - 2761 1 genic_intron novelGene_2336 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.4772.1 chr7 + 1904 10 full-splice_match LRRC28 rna25730 1437 10 19 -486 multi-exon FALSE canonical 38 340 1154 212.066027454 2 6 0 FALSE 0 0 NA A coding 367 1101 124 1224 55 PB.9631.2 chr16 + 2951 11 novel_in_catalog NEK8 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 8 9 1798 45.6179789118 3 1 0 FALSE 0 0 NA B coding 210 630 25 654 85 PB.9631.3 chr16 + 3472 9 novel_in_catalog NEK8 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 8 9 2320 43.6921045499 2 7 1 FALSE 0 0 NA B coding 210 630 30 659 80 PB.1183.1 chr1 + 1670 15 full-splice_match KMO rna6404 1779 15 103 6 multi-exon FALSE canonical 30 518 1042 152.656477098 4 3 0 FALSE 0 0 NA A coding 458 1374 86 1459 25 PB.9631.6 chr16 + 2722 12 novel_in_catalog NEK8 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 8 9 1567 43.5889894354 2 3 0 FALSE 0 0 NA B coding 341 1023 27 1049 85 PB.9631.7 chr16 + 2635 13 novel_in_catalog NEK8 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 8 9 1482 43.5660418216 2 4 0 FALSE 0 0 NA B coding 341 1023 24 1046 85 PB.9631.4 chr16 + 2873 12 novel_in_catalog NEK8 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 8 9 1720 45.4752680036 2 0 0 FALSE 0 0 NA B coding 210 630 29 658 85 PB.9631.5 chr16 + 2991 13 novel_in_catalog NEK8 novel NA NA NA NA combination_of_known_junctions FALSE canonical 5 8 1720 46.021733996 2 6 0 FALSE 0 0 NA B coding 364 1092 1406 2497 85 PB.875.1 chr1 - 1661 9 full-splice_match EPHX1 rna4764 1556 9 -16 -89 multi-exon FALSE canonical 25 459 83 1622.96333908 49 0 0 FALSE 0 0 NA A coding 455 1365 89 1453 25 PB.4187.1 chr6 - 2933 1 genic_intron novelGene_2261 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11663.7 chr20 - 3481 6 novel_not_in_catalog MON1B novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1010 52.3450093132 2 8 0 TRUE 0 0 NA C coding 459 1377 798 2174 40 PB.11663.6 chr20 - 2977 6 full-splice_match MON1B rna62885 3070 6 81 12 multi-exon FALSE canonical 15 17 16 46.872166581 8 2 0 FALSE 0 0 NA C coding 547 1641 27 1667 50 PB.11663.1 chr20 - 3019 6 full-splice_match MON1B rna62886 3316 6 283 14 multi-exon FALSE canonical 34 101 60 18.1383571472 18 1 0 FALSE 0 0 NA C coding 547 1641 71 1711 45 PB.5875.6 chr9 - 2608 1 novel_in_catalog ARID5B novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 7 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 85 PB.1124.2 chr1 + 1685 7 full-splice_match TMCO1 rna6185 1501 7 58 -242 multi-exon FALSE canonical 48 2236 363 664.965412634 2 2 0 FALSE 0 0 NA C coding 188 564 109 672 40 PB.6051.4 chr9 + 2809 1 genic_intron novelGene_1918 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 10 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.7979.1 chr13 + 3165 6 incomplete-splice_match EPAS1 rna43312 4695 16 1528 2 internal_fragment FALSE canonical 32 1002 568 340.412984476 2 3 0 FALSE 0 0 NA A coding 364 1092 42 1133 10 PB.8292.1 chr14 - 2691 5 novel_not_in_catalog NADSYN1 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 1248 360.467751678 2 6 0 TRUE 0 0 NA A coding 88 264 96 359 35 PB.6684.1 chr10 - 5707 26 incomplete-splice_match CELSR1 rna36325 9490 35 5698 -1915 5prime_fragment TRUE canonical 9 15 1732 45.409250159 2 17 1 FALSE 0 0 NA A coding 1230 3690 12 3701 10 PB.2643.1 chr3 + 4048 26 full-splice_match NOS3 rna14244 4346 26 291 7 multi-exon FALSE canonical 4 10 2531 50.7148893324 5 5 0 FALSE 0 0 NA A coding 1205 3615 20 3634 30 PB.6893.1 chr11 - 2950 9 full-splice_match TWF1 rna37562 3042 9 83 9 multi-exon FALSE canonical 43 429 66 253.444273954 269 0 0 FALSE 0 0 NA A coding 350 1050 42 1091 15 PB.8023.1 chr13 + 3752 22 full-splice_match PAPOLG rna43529 4453 22 10 691 multi-exon FALSE canonical 42 263 1629 72.1803297305 7 11 0 FALSE 0 0 NA A coding 736 2208 234 2441 25 PB.11718.2 chr20 + 2859 1 genic_intron novelGene_1425 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 6 NA FALSE 0 0 NA A coding 110 330 1822 2151 75 PB.3409.2 chr5 - 3526 1 antisense novelGene_KLF3_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 17 1 NA FALSE 0 0 NA B coding 111 333 1430 1762 85 PB.3409.1 chr5 - 3537 1 antisense novelGene_KLF3_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 13 2 NA FALSE 0 0 NA B coding 106 318 199 516 90 PB.11718.1 chr20 + 1726 9 full-splice_match IRF8 rna63002 2656 9 -4 934 multi-exon FALSE canonical 23 169 612 362.165707929 162 0 0 FALSE 0 0 NA A coding 426 1278 60 1337 30 PB.1646.1 chr2 - 707 6 full-splice_match RPL14 rna8843 930 6 136 87 multi-exon FALSE canonical 48 13127 25 12310.3688816 13 1 0 FALSE 0 0 NA A coding 211 633 23 655 20 PB.9125.2 chr15 + 1682 1 genic STOM novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 6 5 NA FALSE 0 0 NA C coding 106 318 60 377 25 PB.9125.1 chr15 + 3037 7 full-splice_match STOM rna49549 1379 7 -6 -1652 multi-exon FALSE canonical 46 2389 115 1248.66248442 218 3 0 FALSE 0 0 NA C coding 288 864 55 918 25 PB.10703.1 chr19 + 2701 15 novel_not_in_catalog PDE4A novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 447 46 14 3 0 FALSE 0 0 NA C coding 730 2190 243 2432 85 PB.5477.18 chr8 - 3146 1 genic_intron novelGene_1808 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.10703.3 chr19 + 2831 15 full-splice_match PDE4A rna57779 4530 15 -60 1759 multi-exon FALSE canonical 2 3 224 41.1825205639 2 3 0 FALSE 0 0 NA C coding 825 2475 88 2562 85 PB.10703.4 chr19 + 1899 1 incomplete-splice_match PDE4A rna57779 4530 15 2628 4 mono-exon FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 15 PB.5172.475 chr7 + 1574 10 novel_not_in_catalog LOC721089 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 360 1860.21235347 3 10 0 TRUE 0 0 NA B coding 455 1365 73 1437 15 PB.7887.1 chr13 + 1860 7 novel_not_in_catalog MAPRE3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 161 219.253278197 3 6 0 FALSE 0 0 NA B coding 281 843 169 1011 30 PB.7887.3 chr13 + 3126 6 novel_not_in_catalog MAPRE3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 150 238.744633448 4 6 0 FALSE 0 0 NA B coding 199 597 158 754 40 PB.7887.2 chr13 + 3764 5 novel_not_in_catalog MAPRE3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 161 266.024434968 3 10 0 FALSE 0 0 NA B coding 156 468 2449 2916 30 PB.616.1 chr1 + 2826 11 incomplete-splice_match DDX20 rna3332 3199 12 141 232 internal_fragment FALSE canonical 37 232 301 290.168916323 26 2 0 FALSE 0 0 NA A coding 825 2475 1 2475 35 PB.3042.1 chr4 + 3485 9 full-splice_match NT5E rna16686 4499 9 1007 7 multi-exon FALSE canonical 26 232 347 115.429632244 7 0 0 FALSE 0 0 NA A coding 574 1722 9 1730 15 PB.5674.1 chr9 - 3156 10 full-splice_match NUDT5 rna30675 892 10 -46 -2218 multi-exon FALSE canonical 45 661 343 168.50816004 2 2 0 FALSE 0 0 NA A coding 219 657 163 819 15 PB.8073.2 chr13 + 1511 3 novel_in_catalog MXD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 803 267 291.499571183 15 1 0 FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.7698.3 chr12 + 1015 1 incomplete-splice_match RQCD1 rna41613 3243 8 2218 11 mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 35 PB.2143.12 chr3 + 504 1 genic ACTB novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 25 PB.7698.1 chr12 + 1819 8 full-splice_match RQCD1 rna41611 3497 8 363 1315 multi-exon FALSE canonical 41 236 94 297.966441063 22 0 0 FALSE 0 0 NA C coding 299 897 71 967 20 PB.2872.1 chr4 - 1915 6 full-splice_match SPDEF rna15718 2752 6 829 8 multi-exon FALSE canonical 2 2 400 4.89897948557 9 3 0 FALSE 0 0 NA A coding 335 1005 430 1434 30 PB.10186.2 chr17 + 3952 31 novel_in_catalog PDS5B novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 412 333 248.286125267 2 0 0 FALSE 0 0 NA B coding 1310 3930 22 3951 70 PB.10186.1 chr17 + 4065 32 incomplete-splice_match PDS5B rna54985 7195 35 77 3053 3prime_fragment FALSE canonical 40 330 84 278.486983538 3 5 1 FALSE 0 0 NA B coding 1320 3960 104 4063 45 PB.11392.1 chr20 + 2998 2 full-splice_match ANKS4B rna61684 1620 2 152 -1530 multi-exon FALSE canonical 9 129 175 NA 6 26 0 FALSE 0 0 NA A coding 417 1251 12 1262 75 PB.7863.1 chr13 + 1325 1 incomplete-splice_match RHOB rna42656 2302 2 875 103 mono-exon FALSE canonical NA NA NA NA 7 1 NA FALSE 0 0 NA A coding 163 489 37 525 40 PB.9139.1 chr15 + 2825 4 full-splice_match TNFSF8 rna49633 1924 4 154 -1055 multi-exon FALSE canonical 32 217 218 9 55 0 0 FALSE 0 0 NA A coding 223 669 14 682 20 PB.4722.1 chr7 - 5708 1 genic LOC100424433 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A coding 39 117 200 316 90 PB.9139.2 chr15 + 6161 1 genic_intron novelGene_541 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.8776.1 chr14 - 3623 10 full-splice_match FAM76B rna47688 3950 10 300 27 multi-exon FALSE canonical 44 219 112 444.876387326 4 1 0 FALSE 0 0 NA C coding 339 1017 26 1042 30 PB.4215.4 chr6 - 5568 29 novel_not_in_catalog DIAPH1 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 2012 232.243406796 3 14 1 TRUE 0 0 NA B coding 1163 3489 224 3712 20 PB.1630.3 chr2 + 3522 1 genic_intron novelGene_1806 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A coding 100 300 1098 1397 85 PB.1630.2 chr2 + 2548 2 full-splice_match POMGNT2 rna8750 2565 2 7 10 multi-exon FALSE canonical 24 52 231 NA 10 2 0 FALSE 0 0 NA C coding 580 1740 337 2076 25 PB.1630.1 chr2 + 2753 3 full-splice_match POMGNT2 rna8751 2743 3 -17 7 multi-exon FALSE canonical 17 25 234 5 4 5 0 FALSE 0 0 NA C coding 580 1740 539 2278 15 PB.2402.3 chr3 + 1424 7 novel_not_in_catalog ARPC1A novel NA NA NA NA any annotated donor/acceptor FALSE canonical 8 8 814 899.291943698 2 1 0 FALSE 0 0 NA C coding 244 732 102 833 85 PB.2150.2 chr3 + 2829 5 novel_not_in_catalog KDELR2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 221 649.967691505 2 2 0 FALSE 0 0 NA C coding 150 450 317 766 15 PB.7922.1 chr13 + 3756 6 full-splice_match EHD3 rna42996 3898 6 141 1 multi-exon FALSE canonical 32 393 959 103.966340707 5 2 0 FALSE 0 0 NA A coding 535 1605 458 2062 20 PB.1818.6 chr2 + 3015 11 novel_in_catalog SF3B1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 435 1959 2125.51640784 4 7 0 FALSE 0 0 NA C coding 344 1032 1983 3014 70 PB.2503.3 chr3 + 2530 2 novel_in_catalog CAV1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 31 2892 332 NA 4 1 0 FALSE 0 0 NA C coding 147 441 231 671 35 PB.326.1 chr1 + 2797 19 full-splice_match CTPS1 rna1671 3247 19 437 13 multi-exon FALSE canonical 30 63 108 109.238271682 39 0 0 FALSE 0 0 NA C coding 591 1773 122 1894 40 PB.2855.1 chr4 - 2069 15 full-splice_match WDR46 rna15654 2369 15 296 4 multi-exon FALSE canonical 40 153 1490 204.958532391 9 1 0 FALSE 0 0 NA A coding 614 1842 62 1903 20 PB.1781.1 chr2 + 2784 1 genic TSC22D2 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 20 2 NA FALSE 0 0 NA A coding 682 2046 392 2437 90 PB.11558.9 chr20 - 6136 38 incomplete-splice_match CNOT1 rna62406 7581 48 1417 28 5prime_fragment FALSE canonical 46 1065 1091 374.631819257 4 0 0 FALSE 0 0 NA B coding 1894 5682 206 5887 50 PB.7370.1 chr11 + 1475 1 intergenic novelGene_2145 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.11558.6 chr20 - 7655 49 novel_not_in_catalog CNOT1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 37 310 99 426.673177034 5 0 0 TRUE 0 0 NA B coding 2376 7128 274 7401 40 PB.6564.2 chr10 + 1467 1 genic_intron novelGene_1534 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.10128.4 chr17 + 2916 1 genic_intron novelGene_51 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 4 NA FALSE 0 0 NA A coding 195 585 1636 2220 85 PB.3007.1 chr4 + 2724 1 incomplete-splice_match OGFRL1 rna16471 8145 7 5418 4 mono-exon FALSE canonical NA NA NA NA 6 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 50 PB.6110.1 chr9 + 2739 1 genic PTPRE novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.9653.1 chr16 - 2771 1 incomplete-splice_match SSH2 rna52393 9128 13 5093 1265 mono-exon FALSE canonical NA NA NA NA 14 1 NA FALSE 0 0 NA C coding 136 408 1775 2182 15 PB.56.4 chr1 - 4100 13 novel_not_in_catalog RERE novel NA NA NA NA any annotated donor/acceptor FALSE canonical 6 10 3186 109.114618636 6 3 0 FALSE 0 0 NA B coding 545 1635 509 2143 20 PB.9653.7 chr16 - 1614 10 novel_in_catalog SSH2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 418 708 133.955216397 2 0 0 FALSE 0 0 NA C coding 340 1020 155 1174 80 PB.9653.4 chr16 - 5527 14 full-splice_match SSH2 rna52392 9355 14 0 3828 multi-exon FALSE canonical 40 323 2356 137.273449727 11 0 0 FALSE 0 0 NA C coding 1430 4290 155 4444 35 PB.9653.5 chr16 - 5561 15 novel_not_in_catalog SSH2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 194 237.208768809 2 1 0 TRUE 0 0 NA C coding 1417 4251 106 4356 10 PB.1101.2 chr1 + 2702 6 novel_not_in_catalog SELL novel NA NA NA NA any annotated donor/acceptor FALSE canonical 34 5914 95 1853.36450813 4 4 0 TRUE 0 0 NA B coding 332 996 54 1049 85 PB.5832.2 chr9 - 2962 8 novel_not_in_catalog MCU novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 175 255.814385835 3 0 0 TRUE 0 0 NA C coding 109 327 777 1103 35 PB.5832.1 chr9 - 2920 8 full-splice_match MCU rna31825 2931 8 6 5 multi-exon FALSE canonical 27 81 160 229.288028471 132 5 0 FALSE 0 0 NA C coding 351 1053 11 1063 35 PB.5494.3 chr8 - 1722 1 genic_intron novelGene_1894 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.1502.1 chr2 - 2824 22 full-splice_match ITIH3 rna8114 3347 22 517 6 multi-exon FALSE canonical 16 1472 1745 566.246412792 9 0 0 FALSE 0 0 NA A coding 891 2673 37 2709 25 PB.5494.1 chr8 - 1362 13 novel_not_in_catalog EIF3E novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 108 2825.69000423 111 0 0 FALSE 0 0 NA A coding 396 1188 166 1353 75 PB.5832.4 chr9 - 3192 1 novel_in_catalog MCU novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA C non_coding NA NA NA NA 95 PB.11726.1 chr20 + 3697 18 full-splice_match ZC3H18 rna63086 3742 18 43 2 multi-exon FALSE canonical 12 20 2210 155.164428913 39 1 0 FALSE 0 0 NA C coding 952 2856 172 3027 5 PB.10831.7 chr19 - 1927 9 novel_not_in_catalog FKBP8 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 7 11 257 1782.47328171 6 1 0 FALSE 0 0 NA C coding 413 1239 283 1521 20 PB.466.1 chr1 - 2810 15 full-splice_match LRRC40 rna2549 2807 15 33 -36 multi-exon FALSE canonical 41 271 1354 202.217704467 22 0 0 FALSE 0 0 NA A coding 602 1806 27 1832 40 PB.8110.9 chr13 + 2866 11 novel_in_catalog TTC31 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 30 87 1139 92.043467992 5 0 0 FALSE 0 0 NA C coding 196 588 339 926 30 PB.2849.1 chr4 - 2869 10 novel_not_in_catalog RXRB novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1442 239.904147526 9 4 0 FALSE 0 0 NA C coding 396 1188 260 1447 15 PB.2849.2 chr4 - 2889 10 full-splice_match RXRB rna15642 2922 10 28 5 multi-exon FALSE canonical 32 87 423 193.126901285 5 3 0 FALSE 0 0 NA C coding 511 1533 267 1799 20 PB.10831.2 chr19 - 1691 9 full-splice_match FKBP8 rna58391 1748 9 67 -10 multi-exon FALSE canonical 46 2009 20 1196.64489302 281 0 0 FALSE 0 0 NA C coding 413 1239 46 1284 20 PB.7897.2 chr13 - 3943 20 novel_not_in_catalog GTF3C2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 367 185.081063321 2 0 0 FALSE 0 0 NA C coding 911 2733 392 3124 25 PB.8110.4 chr13 + 2820 12 novel_in_catalog TTC31 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 0 0 951 110.172591873 3 10 0 FALSE 0 0 NA C coding 352 1056 24 1079 30 PB.8110.7 chr13 + 2957 13 full-splice_match TTC31 rna43918 3060 13 99 4 multi-exon FALSE canonical 30 87 1230 93.139680051 11 1 0 FALSE 0 0 NA C coding 539 1617 10 1626 30 PB.7897.1 chr13 - 3837 19 full-splice_match GTF3C2 rna42874 4369 19 522 10 multi-exon FALSE canonical 41 203 263 145.0965196 69 3 0 FALSE 0 0 NA C coding 911 2733 288 3020 25 PB.8110.1 chr13 + 2899 13 full-splice_match TTC31 rna43919 3000 13 96 5 multi-exon FALSE canonical 30 87 1173 90.8129946649 51 1 0 FALSE 0 0 NA C coding 519 1557 13 1569 25 PB.7165.1 chr11 - 2890 10 novel_in_catalog NR2C1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 0 0 2001 361.589546309 2 19 0 FALSE 0 0 NA B coding 185 555 200 754 20 PB.8110.3 chr13 + 3368 11 novel_not_in_catalog TTC31 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1339 113.048662089 2 3 0 FALSE 0 0 NA C coding 186 558 24 581 25 PB.8110.2 chr13 + 3022 12 novel_in_catalog TTC31 novel NA NA NA NA combination_of_known_junctions FALSE canonical 30 87 1296 92.3417565352 6 0 0 FALSE 0 0 NA C coding 360 1080 4 1083 25 PB.6327.1 chr10 - 5895 1 genic_intron novelGene_738 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 4 NA FALSE 0 0 NA A coding 102 306 1331 1636 70 PB.4437.4 chr7 - 1770 4 novel_in_catalog RMDN3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 5 10 56 275.974636516 3 1 1 FALSE 0 0 NA C coding 175 525 64 588 90 PB.10811.1 chr19 + 3552 13 novel_not_in_catalog SLC27A1 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 55 74.303431953 2 1 0 FALSE 0 0 NA C coding 646 1938 57 1994 10 PB.8315.1 chr14 + 2250 11 full-splice_match UNC93B1 rna44987 2345 11 89 6 multi-exon FALSE canonical 15 34 111 183.591938821 3 0 0 FALSE 0 0 NA A coding 597 1791 16 1806 15 PB.4437.1 chr7 - 2091 13 full-splice_match RMDN3 rna24080 2116 13 22 3 multi-exon FALSE canonical 11 14 44 284.777105821 4 0 0 FALSE 0 0 NA C coding 471 1413 46 1458 20 PB.4437.3 chr7 - 1759 4 novel_in_catalog RMDN3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 11 14 50 274.421209093 2 0 0 FALSE 0 0 NA C coding 175 525 52 576 95 PB.4437.2 chr7 - 2109 13 full-splice_match RMDN3 rna24081 2052 13 -51 -6 multi-exon FALSE canonical 5 10 61 285.475042692 5 1 0 FALSE 0 0 NA C coding 471 1413 69 1481 20 PB.8830.2 chr14 - 2497 8 incomplete-splice_match USP28 rna48004 4584 24 2081 6 5prime_fragment FALSE canonical 47 392 286 173.083794735 2 8 0 FALSE 0 0 NA B coding 340 1020 98 1117 10 PB.6874.10 chr11 + 3781 1 incomplete-splice_match KIAA1551 rna37434 5593 5 827 986 mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C coding 1260 3780 1 3780 60 PB.5696.2 chr9 - 3260 1 genic_intron novelGene_386 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 25 NA FALSE 0 0 NA A coding 12 36 334 369 85 PB.5875.3 chr9 - 1361 9 incomplete-splice_match ARID5B rna32097 7932 10 446 6125 internal_fragment FALSE canonical 37 356 744 144.837840359 3 0 0 FALSE 0 0 NA B coding 450 1350 12 1361 75 PB.7666.1 chr12 - 1661 4 full-splice_match METTL21A rna41369 2230 4 24 545 multi-exon FALSE canonical 25 60 52 93.9840411985 4 2 0 FALSE 0 0 NA C coding 218 654 82 735 90 PB.7666.2 chr12 - 1549 3 novel_in_catalog METTL21A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 19 41 228 9.48683298051 2 0 0 FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.7666.3 chr12 - 1644 4 full-splice_match METTL21A rna41367 2610 4 123 843 multi-exon FALSE canonical 27 45 196 100.483829545 6 0 0 FALSE 0 0 NA C coding 247 741 139 879 60 PB.7505.2 chr12 + 5491 17 full-splice_match GPD2 rna40439 5640 17 -60 209 multi-exon FALSE canonical 47 484 133 249.052203363 4 1 0 FALSE 0 0 NA C coding 727 2181 142 2322 20 PB.7505.3 chr12 + 3099 1 novel_in_catalog GPD2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA C non_coding NA NA NA NA 95 PB.11734.1 chr20 - 6453 4 genic_intron novelGene_1479 novel NA NA NA NA no_subcategory TRUE canonical 0 0 107 0 3 39 0 FALSE 0 0 NA A coding 112 336 570 905 85 PB.2025.1 chr3 - 2567 1 novel_in_catalog RRP1B novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA A coding 113 339 2217 2555 60 PB.4323.2 chr6 + 2591 1 genic_intron novelGene_2536 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.923.4 chr1 - 2990 1 genic_intron novelGene_2383 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 8 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.2238.3 chr3 + 3557 6 incomplete-splice_match LOC700358 rna12045 4541 8 977 7 internal_fragment FALSE canonical 30 135 35 282.503097328 29 1 0 FALSE 0 0 NA B coding 931 2793 22 2814 45 PB.230.1 chr1 + 1931 2 novel_in_catalog ATPIF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 45 1480 160 NA 3 1 0 FALSE 0 0 NA A non_coding NA NA NA NA 10 PB.8466.2 chr14 + 1430 8 novel_not_in_catalog LOC697689 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 1176 464.979569444 2 0 0 TRUE 0 0 NA C coding 248 744 164 907 5 PB.8466.1 chr14 + 1423 7 full-splice_match LOC697689 rna45700 1266 7 250 -407 multi-exon FALSE canonical 32 432 669 370.016215861 13 0 0 FALSE 0 0 NA C coding 248 744 121 864 20 PB.2039.1 chr3 + 3116 1 intergenic novelGene_164 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA A coding 82 246 63 308 90 PB.4219.1 chr6 - 5445 31 novel_in_catalog ARAP3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 5 7 67 67.052218457 2 6 0 FALSE 0 0 NA A coding 987 2961 287 3247 40 PB.11465.1 chr20 - 2564 3 full-splice_match ZNF689 rna61948 4012 3 648 800 multi-exon FALSE canonical 26 54 376 60.497933849 7 6 0 FALSE 0 0 NA A coding 500 1500 172 1671 75 PB.10444.1 chr18 - 3156 1 genic_intron novelGene_554 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA A coding 138 414 1992 2405 90 PB.10876.1 chr19 + 3646 2 full-splice_match CEBPG rna58653 1343 2 75 -2378 multi-exon FALSE canonical 42 251 91 NA 37 1 0 FALSE 0 0 NA A coding 150 450 188 637 30 PB.5333.1 chr8 - 2007 3 full-splice_match SNAI2 rna29000 1928 3 -12 -67 multi-exon FALSE canonical 25 162 789 13 2 4 0 FALSE 0 0 NA A coding 268 804 165 968 30 PB.5168.1 chr7 + 3207 24 full-splice_match PACS2 rna28039 3676 24 450 19 multi-exon FALSE canonical 9 9 1164 161.127278882 2 9 0 FALSE 0 0 NA A coding 889 2667 40 2706 25 PB.8830.3 chr14 - 5839 23 novel_not_in_catalog USP28 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 332 299.118705533 3 9 0 TRUE 0 0 NA B coding 869 2607 437 3043 90 PB.840.1 chr1 + 609 5 full-splice_match FCER1G rna4588 574 5 -18 -17 multi-exon FALSE canonical 43 1404 92 206.893692509 5 0 0 FALSE 0 0 NA A coding 86 258 44 301 25 PB.8365.2 chr14 + 2864 1 genic AP5B1 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA C coding 223 669 257 925 90 PB.8365.1 chr14 + 3197 2 full-splice_match AP5B1 rna45201 3254 2 53 4 multi-exon FALSE canonical 44 132 478 NA 2 8 0 FALSE 0 0 NA C coding 878 2634 329 2962 20 PB.9397.18 chr15 - 2649 17 novel_not_in_catalog HNRNPK novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 96 4343.68104262 3 5 1 TRUE 0 0 NA C coding 463 1389 207 1595 75 PB.5505.1 chr8 + 3957 1 genic_intron novelGene_2017 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A coding 115 345 2568 2912 90 PB.2841.1 chr4 + 5408 41 full-splice_match LOC721200 rna15549 5450 41 28 14 multi-exon FALSE canonical 20 264 2643 652.507471222 92 0 0 FALSE 0 0 NA C coding 1744 5232 52 5283 20 PB.2841.2 chr4 + 5519 40 novel_in_catalog LOC721200 novel NA NA NA NA combination_of_known_junctions FALSE canonical 22 363 1920 631.144199054 3 2 0 FALSE 0 0 NA C coding 887 2661 52 2712 25 PB.8200.1 chr13 - 4092 20 full-splice_match TBC1D8 rna44280 4147 20 2 53 multi-exon FALSE canonical 26 50 265 99.6644369873 6 4 0 FALSE 0 0 NA A coding 1140 3420 139 3558 15 PB.210.1 chr1 + 1320 9 fusion NUDC_LOC106997127 novel NA NA NA NA no_subcategory TRUE canonical 0 0 850 757.633156613 45 3 0 TRUE 0 0 NA A coding 251 753 103 855 0 PB.3332.1 chr5 + 1823 5 full-splice_match NSG1 rna18161 2654 5 363 468 multi-exon FALSE canonical 21 186 85 738.778721946 2 4 0 FALSE 0 0 NA A coding 185 555 112 666 20 PB.7433.1 chr12 + 3516 1 genic_intron novelGene_446 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.4700.1 chr7 - 1425 4 full-splice_match C7H15orf40 rna25425 537 4 5 -893 multi-exon FALSE canonical 33 102 129 85.0999412456 4 1 0 FALSE 0 0 NA A coding 154 462 16 477 40 PB.10852.1 chr19 + 2888 4 full-splice_match ZNF101 rna58499 1798 4 39 -1129 multi-exon FALSE canonical 36 200 124 150.019998667 2 2 0 FALSE 0 0 NA C coding 427 1281 122 1402 5 PB.10852.2 chr19 + 2801 3 novel_in_catalog ZNF101 novel NA NA NA NA combination_of_known_junctions FALSE canonical 22 50 228 75 2 2 0 FALSE 0 0 NA C coding 70 210 99 308 10 PB.8150.1 chr13 - 888 5 fusion LOC701504_LOC106993048 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 338 1555.85346354 2 1 0 TRUE 0 0 NA A coding 219 657 21 677 5 PB.1902.1 chr2 + 1404 6 novel_not_in_catalog UBE2E1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 97 612.133155449 5 3 0 FALSE 0 0 NA A coding 193 579 131 709 20 PB.5641.1 chr9 - 2969 1 antisense novelGene_WDR37_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.8579.1 chr14 + 1431 6 full-splice_match CCDC34 rna46456 2470 6 1031 8 multi-exon FALSE canonical 28 180 501 51.3614641536 2 0 0 FALSE 0 0 NA A coding 367 1101 22 1122 20 PB.4022.8 chr6 - 3286 6 novel_in_catalog MEF2C novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 931 226 670.441645485 3 2 0 FALSE 0 0 NA C coding 230 690 366 1055 85 PB.6737.1 chr11 + 4340 32 full-splice_match NCAPD2 rna36675 5227 32 437 450 multi-exon FALSE canonical 31 163 3882 108.060168425 9 1 0 FALSE 0 0 NA C coding 1399 4197 52 4248 80 PB.6737.2 chr11 + 4133 31 incomplete-splice_match NCAPD2 rna36675 5227 32 418 676 3prime_fragment TRUE canonical 31 163 3901 109.813478226 2 0 0 FALSE 0 0 NA C coding 1354 4062 71 4132 55 PB.11626.1 chr20 - 2925 7 genic ST3GAL2 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 2878 0 2 3 0 TRUE 0 0 NA B non_coding NA NA NA NA 15 PB.5113.1 chr7 - 6117 1 intergenic novelGene_2416 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 18 NA FALSE 0 0 NA A non_coding NA NA NA NA 60 PB.10387.1 chr18 - 1303 1 intergenic novelGene_123 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 40 PB.8639.5 chr14 - 3332 24 full-splice_match PPFIBP2 rna46916 3599 24 257 10 multi-exon FALSE canonical 33 211 138 196.183587489 6 0 0 FALSE 0 0 NA C coding 875 2625 175 2799 45 PB.4844.3 chr7 - 3236 1 novel_in_catalog GZMB novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA C coding 136 408 866 1273 15 PB.11626.2 chr20 - 3921 6 novel_not_in_catalog ST3GAL2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 10 18 1688 255.288072577 2 10 0 TRUE 0 0 NA B coding 290 870 1156 2025 90 PB.4844.1 chr7 - 884 5 full-splice_match GZMB rna26226 986 5 97 5 multi-exon FALSE canonical 35 1658 85 554.458294194 35 1 0 FALSE 0 0 NA C coding 247 741 31 771 15 PB.736.3 chr1 + 3021 9 novel_in_catalog INTS3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 31 441 1608 94.6889645101 2 9 0 FALSE 0 0 NA C coding 405 1215 998 2212 5 PB.9834.1 chr16 + 3102 1 antisense novelGene_SMARCE1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA A coding 131 393 274 666 90 PB.6888.1 chr11 - 3146 1 genic_intron novelGene_831 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 8 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.3315.1 chr5 - 2149 11 full-splice_match NELFA rna18075 3536 11 1371 16 multi-exon FALSE canonical 13 20 1045 60.1747455333 8 1 0 FALSE 0 0 NA A coding 528 1584 10 1593 45 PB.761.1 chr1 - 3135 23 full-splice_match THBS3 rna4179 3107 23 -10 -18 multi-exon FALSE canonical 26 74 667 92.1086315174 6 0 0 FALSE 0 0 NA C coding 956 2868 22 2889 25 PB.7807.1 chr12 + 2748 13 novel_in_catalog FARP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 25 50 117 133.382907451 7 5 0 FALSE 0 0 NA C coding 796 2388 144 2531 10 PB.2909.4 chr4 + 2662 7 novel_in_catalog TBC1D22B novel NA NA NA NA combination_of_known_junctions FALSE canonical 36 204 725 88.5042371867 3 1 0 FALSE 0 0 NA C coding 329 987 125 1111 95 PB.7807.3 chr12 + 3951 27 full-splice_match FARP2 rna42305 3995 27 41 3 multi-exon TRUE canonical 21 35 54 183.223906737 2 0 0 FALSE 0 0 NA C coding 1055 3165 81 3245 15 PB.7807.2 chr12 + 3997 27 full-splice_match FARP2 rna42303 4035 27 42 -4 multi-exon FALSE canonical 22 45 1533 182.480135905 8 1 0 FALSE 0 0 NA C coding 1055 3165 120 3284 10 PB.2909.1 chr4 + 3414 13 full-splice_match TBC1D22B rna15871 3429 13 10 5 multi-exon FALSE canonical 30 134 1112 109.238271682 30 0 0 FALSE 0 0 NA C coding 505 1515 131 1645 5 PB.10618.1 chr19 + 1503 2 full-splice_match TNFAIP8L1 rna57387 692 2 12 -823 multi-exon FALSE canonical 25 140 96 NA 2 4 0 FALSE 0 0 NA A coding 186 558 100 657 90 PB.4780.1 chr7 - 2744 1 genic CHSY1 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 9 1 NA FALSE 0 0 NA A coding 340 1020 40 1059 25 PB.218.9 chr1 - 2560 2 novel_in_catalog WASF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 228 184 NA 3 3 0 FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.218.8 chr1 - 1384 7 novel_in_catalog WASF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 228 183 217.635015565 2 0 0 FALSE 0 0 NA C coding 275 825 227 1051 80 PB.701.8 chr1 - 1880 9 novel_not_in_catalog CTSS novel NA NA NA NA any annotated donor/acceptor FALSE canonical 14 24 996 2520.71914342 3 7 0 FALSE 0 0 NA C coding 344 1032 101 1132 25 PB.701.4 chr1 - 1712 9 novel_not_in_catalog CTSS novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1688 2087.81177313 4 2 0 TRUE 0 0 NA C coding 331 993 141 1133 5 PB.218.2 chr1 - 1556 1 incomplete-splice_match WASF2 rna1082 5684 9 2745 1384 mono-exon FALSE canonical NA NA NA NA 21 0 NA FALSE 0 0 NA C coding 111 333 597 929 80 PB.218.1 chr1 - 2844 9 full-splice_match WASF2 rna1082 5684 9 24 2816 multi-exon FALSE canonical 33 163 1561 246.927114753 76 1 0 FALSE 0 0 NA C coding 498 1494 223 1716 20 PB.701.7 chr1 - 3692 7 novel_in_catalog CTSS novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 3710 2546 1206.64700721 2 10 0 FALSE 0 0 NA C coding 220 660 138 797 40 PB.218.7 chr1 - 5577 8 novel_in_catalog WASF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 228 184 224.22756298 7 1 0 FALSE 0 0 NA C coding 461 1383 228 1610 90 PB.701.1 chr1 - 1286 1 incomplete-splice_match GOLPH3L rna3765 3308 6 2018 5 mono-exon FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 5 PB.8545.1 chr14 + 2731 11 full-splice_match PAMR1 rna46291 3134 11 399 4 multi-exon FALSE canonical 18 41 863 33.2415402772 16 4 0 FALSE 0 0 NA A coding 720 2160 44 2203 40 PB.1275.1 chr2 + 3199 1 novel_in_catalog C2H3orf52 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 10 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.4015.1 chr6 + 6342 1 genic_intron novelGene_1565 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 15 NA FALSE 0 0 NA B non_coding NA NA NA NA 75 PB.11862.2 chrX - 1847 16 novel_not_in_catalog SLC38A5 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 39 79.3221280602 10 3 1 TRUE 0 0 NA A coding 472 1416 41 1456 20 PB.9558.1 chr16 - 1681 6 full-splice_match LOC722074 rna51920 1747 6 52 14 multi-exon FALSE canonical 33 422 302 387.271222788 34 0 0 FALSE 0 0 NA A coding 301 903 30 932 25 PB.4269.1 chr6 - 2126 10 full-splice_match SPARC rna23088 3365 10 225 1014 multi-exon FALSE canonical 32 2268 71 1894.90870492 2 0 0 FALSE 0 0 NA C coding 303 909 85 993 20 PB.3309.1 chr5 + 2156 9 full-splice_match MAEA rna18040 2158 9 -3 5 multi-exon FALSE canonical 41 179 272 190.688227219 4 0 0 FALSE 0 0 NA A coding 396 1188 21 1208 35 PB.8150.3 chr13 - 922 8 novel_not_in_catalog LOC702099 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 396 11.9163752878 2 14 1 TRUE 0 0 NA A non_coding NA NA NA NA 0 PB.10804.1 chr19 + 5645 29 novel_not_in_catalog MYO9B novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 3 4253 149.686338722 2 2 0 FALSE 0 0 NA B coding 1514 4542 125 4666 20 PB.12183.1 chrUn_NW_014867910v1 + 4014 1 intergenic novelGene_40 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 9 NA FALSE 0 0 NA A coding 168 504 1572 2075 80 PB.12120.13 chrX - 3527 19 novel_in_catalog ARHGAP4 novel NA NA NA NA combination_of_known_junctions FALSE canonical 20 48 134 215.313724597 3 0 0 FALSE 0 0 NA C coding 506 1518 68 1585 15 PB.10081.1 chr16 - 2580 8 full-splice_match SGSH rna54502 2592 8 -1 13 multi-exon FALSE canonical 10 12 165 29.8161030318 40 1 0 FALSE 0 0 NA C coding 502 1506 78 1583 10 PB.10081.3 chr16 - 5869 2 novel_in_catalog SGSH novel NA NA NA NA combination_of_known_junctions FALSE canonical 26 63 4306 NA 3 4 0 FALSE 0 0 NA C coding 131 393 4471 4863 25 PB.4767.2 chr7 - 3068 1 intergenic novelGene_1516 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA B non_coding NA NA NA NA 55 PB.9264.1 chr15 + 8169 57 full-splice_match TLN1 rna50246 8440 57 267 4 multi-exon FALSE canonical 38 285 2964 1109.46518647 31 18 0 FALSE 0 0 NA C coding 2541 7623 94 7716 20 PB.8848.1 chr14 - 1683 8 full-splice_match FXYD6 rna48103 733 8 72 -1022 multi-exon FALSE canonical 13 116 64 204.570281322 24 0 0 FALSE 0 0 NA A coding 95 285 70 354 15 PB.9264.3 chr15 + 8228 57 novel_not_in_catalog TLN1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 17 70 122 1118.91867444 3 6 0 FALSE 0 0 NA C coding 2541 7623 153 7775 20 PB.1035.8 chr1 + 7596 4 novel_not_in_catalog FAM129A novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 539 505.823091604 2 12 0 TRUE 0 0 NA C coding 163 489 1818 2306 50 PB.6587.1 chr10 + 3797 16 full-splice_match MICALL1 rna35929 4061 16 240 24 multi-exon FALSE canonical 5 6 1494 90.8735385027 2 10 0 FALSE 0 0 NA A coding 863 2589 30 2618 5 PB.5208.1 chr8 + 1377 1 full-splice_match C8H8orf48 rna28309 1432 1 51 4 mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A coding 313 939 93 1031 20 PB.9264.9 chr15 + 6007 40 incomplete-splice_match TLN1 rna50248 8424 58 2413 4 internal_fragment FALSE canonical 42 285 802 595.497271194 18 1 0 FALSE 0 0 NA C coding 1726 5178 377 5554 20 PB.10554.13 chr19 + 2626 13 incomplete-splice_match HMHA1 rna57123 4064 23 1436 2 internal_fragment FALSE canonical 27 226 1018 165.157500587 34 2 0 FALSE 0 0 NA C coding 670 2010 32 2041 5 PB.5078.7 chr7 + 1454 2 genic_intron novelGene_2368 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 885 NA 3 1 0 FALSE 0 0 NA A coding 130 390 274 663 75 PB.11570.1 chr20 - 1389 1 novel_in_catalog FAM96B novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.5078.1 chr7 + 2630 13 full-splice_match C7H14orf159 rna27492 2646 13 11 5 multi-exon FALSE canonical 34 161 707 125.522906276 4 2 0 FALSE 0 0 NA C coding 590 1770 345 2114 25 PB.9941.3 chr16 - 1325 5 novel_not_in_catalog LIMD2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 130 603.926320009 7 10 1 TRUE 0 0 NA B coding 127 381 228 608 20 PB.5078.3 chr7 + 2710 13 novel_in_catalog C7H14orf159 novel NA NA NA NA combination_of_known_junctions FALSE canonical 33 92 1902 141.092168457 2 1 0 FALSE 0 0 NA C coding 522 1566 344 1909 30 PB.437.1 chr1 + 3072 10 full-splice_match NFIA rna2357 2845 10 192 -419 multi-exon FALSE canonical 29 132 1586 225.96238625 12 6 0 FALSE 0 0 NA C coding 498 1494 167 1660 80 PB.66.3 chr1 - 1593 1 incomplete-splice_match CLSTN1 rna356 4260 16 2665 3 mono-exon FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA B non_coding NA NA NA NA 10 PB.66.4 chr1 - 3942 14 incomplete-splice_match CLSTN1 rna356 4260 16 315 3 5prime_fragment FALSE canonical 36 490 1044 707.002121638 4 6 0 FALSE 0 0 NA B coding 775 2325 87 2411 10 PB.7177.5 chr11 + 1515 7 novel_in_catalog SLC25A3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1945 411 4801.2090144 8 0 0 FALSE 0 0 NA C coding 361 1083 255 1337 20 PB.7177.4 chr11 + 2886 7 novel_in_catalog SLC25A3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 1711 24 4870.66822931 2 6 0 FALSE 0 0 NA C coding 318 954 1760 2713 10 PB.9550.8 chr16 - 1632 1 genic_intron novelGene_204 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.9550.9 chr16 - 2155 1 novel_in_catalog PIK3R5 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 39 2 NA FALSE 0 0 NA B coding 104 312 3 314 75 PB.7177.1 chr11 + 1294 8 novel_not_in_catalog SLC25A3 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 28 5758.18669374 2 0 0 FALSE 0 0 NA C coding 361 1083 33 1115 20 PB.7177.3 chr11 + 1296 8 novel_in_catalog SLC25A3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 26 110 32 5733.79516551 11 2 0 FALSE 0 0 NA C coding 361 1083 37 1119 15 PB.7177.2 chr11 + 1323 8 full-splice_match SLC25A3 rna38959 1616 8 17 276 multi-exon FALSE canonical 44 1711 55 5397.41539999 53 0 0 FALSE 0 0 NA C coding 361 1083 60 1142 15 PB.9550.2 chr16 - 3174 21 novel_not_in_catalog PIK3R6 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 2 2 999 11.2694276696 6 0 0 FALSE 0 0 NA A coding 754 2262 355 2616 25 PB.9550.3 chr16 - 1341 1 genic PIK3R5 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 5 2 NA FALSE 0 0 NA B non_coding NA NA NA NA 40 PB.9806.1 chr16 - 1646 5 full-splice_match RPL23 rna53165 507 5 6 -1145 multi-exon FALSE canonical 40 21540 37 8108.28126054 2 3 0 FALSE 0 0 NA A coding 140 420 25 444 10 PB.9597.1 chr16 - 1783 12 full-splice_match SHMT1 rna52139 2534 12 96 655 multi-exon FALSE canonical 29 752 86 521.105555526 4 0 0 FALSE 0 0 NA A coding 483 1449 106 1554 20 PB.3301.1 chr5 + 2819 4 full-splice_match LOC714265 rna17988 4071 4 -1 1253 multi-exon FALSE canonical 44 482 208 19.4422220952 5 1 0 FALSE 0 0 NA A coding 476 1428 206 1633 20 PB.9550.4 chr16 - 3067 9 incomplete-splice_match PIK3R5 rna51896 4369 19 1762 -460 5prime_fragment FALSE canonical 19 40 288 69.303679556 4 4 0 FALSE 0 0 NA B coding 268 804 220 1023 40 PB.9550.5 chr16 - 2682 4 novel_in_catalog PIK3R5 novel NA NA NA NA combination_of_known_junctions FALSE canonical 27 59 131 48.754486973 2 1 0 FALSE 0 0 NA B coding 101 303 145 447 80 PB.7696.5 chr12 + 1602 9 novel_not_in_catalog SLC11A1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 17 50 851 282.948758612 16 3 0 FALSE 0 0 NA C coding 267 801 66 866 80 PB.8150.5 chr13 - 954 4 fusion LOC701504_LOC106993049 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 393 1696.58657309 5 4 0 TRUE 0 0 NA A coding 144 432 45 476 0 PB.7696.3 chr12 + 1278 1 novel_in_catalog SLC11A1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 9 1 NA FALSE 0 0 NA C coding 125 375 764 1138 85 PB.2915.1 chr4 - 1970 6 full-splice_match GLO1 rna15895 1968 6 24 -26 multi-exon FALSE canonical 47 903 158 1018.79585786 16 2 0 FALSE 0 0 NA A coding 184 552 75 626 40 PB.5535.1 chr8 - 3268 1 intergenic novelGene_2109 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 59 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 55 PB.7064.1 chr11 + 1501 6 novel_not_in_catalog TMEM5 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 3 459 183.019124684 2 1 0 FALSE 0 0 NA A coding 118 354 1146 1499 70 PB.4475.4 chr7 + 3066 18 full-splice_match TUBGCP4 rna24257 4158 18 88 1004 multi-exon FALSE canonical 36 194 281 98.549479958 7 1 0 FALSE 0 0 NA C coding 666 1998 204 2201 50 PB.11073.1 chr19 - 639 7 full-splice_match RPL18 rna59828 630 7 -12 3 multi-exon FALSE canonical 47 10115 454 9698.08115041 7 0 0 FALSE 0 0 NA A coding 188 564 34 597 10 PB.8840.1 chr14 + 2980 6 full-splice_match PAFAH1B2 rna48065 1612 6 29 -1397 multi-exon FALSE canonical 47 768 110 847.457373559 56 2 0 FALSE 0 0 NA C coding 229 687 118 804 15 PB.5172.562 chr7 + 1507 7 fusion LOC720839_LOC714310 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 402 1935.5107853 2 17 0 TRUE 0 0 NA B coding 245 735 729 1463 20 PB.974.1 chr1 - 5708 1 genic_intron novelGene_2475 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 8 10 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.5172.561 chr7 + 1600 7 fusion LOC708891_LOC714310 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 428 3556.07536478 2 9 0 TRUE 0 0 NA B coding 196 588 878 1465 15 PB.11812.1 chrX - 1537 7 full-splice_match EIF1AX rna63481 2279 7 -3 745 multi-exon FALSE canonical 47 2488 620 860.583522966 36 1 0 FALSE 0 0 NA A coding 144 432 192 623 65 PB.11057.2 chr19 + 3882 17 full-splice_match DHX34 rna59735 4345 17 61 402 multi-exon FALSE canonical 8 8 2608 30.61045573 4 1 0 FALSE 0 0 NA C coding 1143 3429 302 3730 30 PB.9105.1 chr15 + 3199 1 genic LOC693910 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 19 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.11057.1 chr19 + 2666 7 novel_in_catalog DHX34 novel NA NA NA NA combination_of_known_junctions FALSE canonical 25 52 1917 22.825424421 2 0 0 FALSE 0 0 NA C coding 596 1788 325 2112 85 PB.4427.2 chr7 - 2957 2 novel_in_catalog SRP14 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 5721 70 NA 4 11 0 FALSE 0 0 NA C coding 119 357 47 403 20 PB.984.1 chr1 + 3493 12 full-splice_match KLHL12 rna5412 3294 12 -25 -174 multi-exon FALSE canonical 45 313 130 259.380030072 55 0 0 FALSE 0 0 NA A coding 568 1704 176 1879 20 PB.4427.1 chr7 - 769 5 full-splice_match SRP14 rna24017 1060 5 -28 319 multi-exon FALSE canonical 48 5721 73 1950.12204746 8 0 0 FALSE 0 0 NA C coding 144 432 50 481 20 PB.1225.1 chr2 - 2753 1 genic_intron novelGene_300 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.7412.5 chr12 - 2170 5 full-splice_match RALB rna40106 2300 5 121 9 multi-exon FALSE canonical 28 149 50 632.750345713 11 0 0 FALSE 0 0 NA A coding 206 618 105 722 35 PB.5194.1 chr8 - 2509 14 novel_in_catalog TNKS novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 368 1769 201.218786399 2 13 0 FALSE 0 0 NA A coding 757 2271 21 2291 80 PB.2172.2 chr3 - 1648 6 novel_not_in_catalog BCL7B novel NA NA NA NA any annotated donor/acceptor FALSE canonical 13 27 196 281.946803493 7 0 0 FALSE 0 0 NA C non_coding NA NA NA NA 25 PB.2172.1 chr3 - 1572 6 full-splice_match BCL7B rna11611 1706 6 133 1 multi-exon FALSE canonical 43 426 538 154.861228201 2 1 0 FALSE 0 0 NA C coding 202 606 23 628 10 PB.9396.2 chr15 - 2828 10 full-splice_match UBQLN1 rna51068 4081 10 350 903 multi-exon FALSE canonical 48 916 1469 557.373303989 6 1 0 FALSE 0 0 NA C coding 561 1683 222 1904 40 PB.9831.4 chr16 - 3536 26 incomplete-splice_match TOP2A rna53290 5735 35 33 2166 internal_fragment FALSE canonical 20 759 2408 329.734741876 6 0 0 FALSE 0 0 NA C coding 1137 3411 126 3536 60 PB.553.1 chr1 - 3153 16 novel_not_in_catalog FRRS1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 28 130 866 89.5935265519 6 3 0 FALSE 0 0 NA A coding 406 1218 108 1325 65 PB.2416.1 chr3 + 2012 4 full-splice_match ZSCAN21 rna13068 2028 4 14 2 multi-exon FALSE canonical 35 118 70 113.94296819 2 2 0 FALSE 0 0 NA C coding 466 1398 188 1585 35 PB.6697.16 chr10 - 6631 36 novel_not_in_catalog PLXNB2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1676 283.637092074 3 3 0 FALSE 0 0 NA C coding 880 2640 3254 5893 10 PB.6697.15 chr10 - 6489 37 novel_not_in_catalog PLXNB2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 5 5 153 274.692555414 3 5 0 FALSE 0 0 NA C coding 1844 5532 220 5751 10 PB.5185.11 chr8 + 1528 1 incomplete-splice_match CTSB rna28232 2675 6 1142 6 mono-exon FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 35 PB.2051.7 chr3 + 3391 9 novel_not_in_catalog DSCR3 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 1962 320.764711276 10 5 0 TRUE 0 0 NA B coding 297 891 67 957 40 PB.2051.6 chr3 + 3079 10 novel_not_in_catalog DSCR3 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 1676 367.182515924 2 11 2 TRUE 0 0 NA B coding 297 891 67 957 40 PB.2051.5 chr3 + 3405 9 novel_not_in_catalog DSCR3 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 1992 320.764711276 7 4 0 TRUE 0 0 NA B coding 297 891 73 963 20 PB.2051.4 chr3 + 2950 9 novel_not_in_catalog DSCR3 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1674 320.764711276 2 8 0 TRUE 0 0 NA B coding 297 891 73 963 45 PB.2051.3 chr3 + 3415 9 novel_not_in_catalog DSCR3 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 1947 320.764711276 22 4 0 TRUE 0 0 NA B coding 297 891 95 985 45 PB.2051.2 chr3 + 3425 9 novel_not_in_catalog DSCR3 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 1634 320.764711276 2 7 0 TRUE 0 0 NA B coding 297 891 96 986 45 PB.8567.1 chr14 + 3077 1 antisense novelGene_EIF3M_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11894.1 chrX + 2533 13 full-splice_match MAGED4B rna63986 2590 13 62 -5 multi-exon FALSE canonical 12 51 1152 77.6659513558 2 0 0 FALSE 0 0 NA A coding 741 2223 109 2331 15 PB.6037.1 chr9 + 4139 14 full-splice_match ADD3 rna32892 4556 14 416 1 multi-exon FALSE canonical 31 207 138 1285.73403159 10 1 0 FALSE 0 0 NA C coding 674 2022 169 2190 30 PB.2051.9 chr3 + 767 1 antisense novelGene_LOC694062_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 10 1 NA FALSE 0 0 NA A coding 104 312 289 600 35 PB.58.1 chr1 + 1771 1 antisense novelGene_ENO1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.6651.1 chr10 - 1176 7 novel_not_in_catalog RRP7A novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 640 227.138724131 34 5 0 TRUE 0 0 NA A coding 156 468 11 478 35 PB.6446.6 chr10 - 4430 10 full-splice_match DGCR2 rna35116 4738 10 303 5 multi-exon FALSE non_canonical 43 232 1390 203.784199584 43 0 0 FALSE 0 0 NA C coding 550 1650 232 1881 30 PB.6446.5 chr10 - 4253 9 full-splice_match DGCR2 rna35115 4561 9 303 5 multi-exon TRUE non_canonical 13 22 856 202.711617822 2 10 0 FALSE 0 0 NA C coding 491 1473 232 1704 30 PB.468.1 chr1 + 2803 12 full-splice_match SRSF11 rna2557 2955 12 143 9 multi-exon FALSE canonical 48 763 469 1280.23396299 22 7 0 FALSE 0 0 NA C coding 483 1449 136 1584 30 PB.6446.1 chr10 - 1231 1 incomplete-splice_match DGCR2 rna35115 4561 9 3326 5 mono-exon FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.1177.2 chr1 + 6877 33 full-splice_match MTR rna6365 4251 33 -299 -2327 multi-exon FALSE canonical 41 342 3802 210.717820794 2 13 0 FALSE 0 0 NA C coding 1265 3795 398 4192 45 PB.6592.15 chr10 - 2719 1 novel_in_catalog DDX17 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 8 5 NA FALSE 0 0 NA B non_coding NA NA NA NA 80 PB.6592.14 chr10 - 1799 10 novel_in_catalog DDX17 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 5951 361 1596.82121729 3 1 0 FALSE 0 0 NA B coding 400 1200 312 1511 90 PB.2204.1 chr3 + 2932 1 genic_intron novelGene_1060 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.6592.11 chr10 - 5836 12 novel_not_in_catalog DDX17 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 4531 3199.86452838 2 8 0 TRUE 0 0 NA B coding 304 912 192 1103 85 PB.6446.9 chr10 - 2911 9 novel_in_catalog DGCR2 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical 43 232 1361 201.208846724 15 2 0 FALSE 0 0 NA C coding 467 1401 203 1603 85 PB.6446.8 chr10 - 4264 9 novel_in_catalog DGCR2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 3 3 403 274.160536912 3 6 0 FALSE 0 0 NA C coding 505 1515 202 1716 30 PB.2928.1 chr4 + 3911 2 antisense novelGene_MED20_AS novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 161 NA 6 0 0 FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.6975.2 chr11 - 2977 14 novel_in_catalog ITGB7 novel NA NA NA NA combination_of_known_junctions FALSE canonical 19 50 36 103.266645147 2 2 0 FALSE 0 0 NA C coding 359 1077 40 1116 20 PB.8607.1 chr14 - 3165 1 genic_intron novelGene_1065 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 42 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.8251.3 chr14 - 1711 10 full-splice_match RNH1 rna44611 1944 10 227 6 multi-exon FALSE canonical 29 60 80 173.046236596 7 5 0 FALSE 0 0 NA C coding 456 1368 167 1534 10 PB.8251.2 chr14 - 1696 10 incomplete-splice_match RNH1 rna44608 1895 11 195 4 5prime_fragment FALSE canonical 41 237 1261 145.368497275 2 3 1 FALSE 0 0 NA C coding 456 1368 150 1517 10 PB.8251.1 chr14 - 1718 10 full-splice_match RNH1 rna44607 1810 10 84 8 multi-exon FALSE canonical 44 237 1287 155.823618235 64 0 0 FALSE 0 0 NA C coding 456 1368 176 1543 10 PB.2296.4 chr3 + 1857 10 novel_in_catalog SKAP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 319 892 376.368170812 2 0 0 FALSE 0 0 NA C coding 187 561 320 880 90 PB.8251.4 chr14 - 1828 10 full-splice_match RNH1 rna44609 1879 10 44 7 multi-exon FALSE canonical 39 237 1396 144.350268445 5 1 1 FALSE 0 0 NA C coding 456 1368 285 1652 10 PB.12026.5 chrX + 2546 1 genic LOC705165 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 18 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.10630.1 chr19 - 2886 1 antisense novelGene_LOC106994614_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA A coding 100 300 2538 2837 90 PB.8969.1 chr15 + 1633 2 full-splice_match FUT7 rna48756 2867 2 1222 12 multi-exon FALSE canonical 23 202 108 NA 15 13 0 FALSE 0 0 NA A coding 342 1026 96 1121 10 PB.4148.3 chr6 - 3059 5 novel_in_catalog PPP2CA novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 2724 316 529.400604458 2 1 0 FALSE 0 0 NA C coding 170 510 215 724 45 PB.11134.1 chr19 + 2906 1 antisense novelGene_ZNF350_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA A coding 129 387 2247 2633 85 PB.7759.3 chr12 + 5804 29 full-splice_match GIGYF2 rna42034 5868 29 46 18 multi-exon FALSE canonical 39 398 3844 387.437736933 2 1 0 FALSE 0 0 NA C coding 1302 3906 152 4057 45 PB.2296.2 chr3 + 2956 1 novel_in_catalog SKAP2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.7759.1 chr12 + 3446 25 incomplete-splice_match GIGYF2 rna42034 5868 29 22 2400 3prime_fragment TRUE canonical 39 582 66 363.085389406 2 3 0 FALSE 0 0 NA C coding 1090 3270 176 3445 75 PB.9423.1 chr15 - 3832 15 full-splice_match FANCC rna51239 3876 15 41 3 multi-exon FALSE canonical 16 29 1404 241.948341594 3 2 0 FALSE 0 0 NA C coding 558 1674 251 1924 30 PB.9423.3 chr15 - 3832 15 novel_not_in_catalog FANCC novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 174 255.282196794 2 1 0 FALSE 0 0 NA C coding 558 1674 253 1926 25 PB.9423.2 chr15 - 3920 16 full-splice_match FANCC rna51240 3965 16 41 4 multi-exon TRUE canonical 16 29 1493 244.891812848 2 1 0 FALSE 0 0 NA C coding 558 1674 340 2013 30 PB.7932.1 chr13 + 2826 20 full-splice_match TTC27 rna43029 2920 20 87 7 multi-exon FALSE canonical 43 294 1868 97.575611707 29 0 0 FALSE 0 0 NA C coding 843 2529 189 2717 20 PB.7932.2 chr13 + 2721 19 novel_in_catalog TTC27 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 4 4 1862 146.812805981 2 5 0 FALSE 0 0 NA C coding 810 2430 183 2612 20 PB.7932.3 chr13 + 3549 19 novel_in_catalog TTC27 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 3 3 1299 153.879823239 2 4 0 FALSE 0 0 NA C coding 805 2415 181 2595 55 PB.10765.1 chr19 - 1491 11 full-splice_match DDX39A rna58124 1538 11 40 7 multi-exon FALSE canonical 42 545 1046 229.910852288 58 0 0 FALSE 0 0 NA A coding 427 1281 73 1353 30 PB.12199.1 chrUn_NW_014990353v1 + 2938 4 intergenic novelGene_15 novel NA NA NA NA no_subcategory FALSE canonical 11 16 2517 30.495901364 4 4 0 FALSE 0 0 NA A coding 161 483 1539 2021 15 PB.4502.2 chr7 - 5741 36 incomplete-splice_match FBN1 rna24419 9919 65 4185 -7 5prime_fragment FALSE canonical 26 607 1634 186.930468357 2 0 0 FALSE 0 0 NA A coding 1602 4806 20 4825 5 PB.1143.2 chr1 + 4283 16 novel_not_in_catalog GALNT2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1541 165.426720937 2 11 0 TRUE 0 0 NA C coding 525 1575 43 1617 15 PB.664.6 chr1 - 3271 1 genic TXNIP novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 16 11 NA FALSE 0 0 NA B coding 142 426 1748 2173 70 PB.8150.9 chr13 - 946 4 fusion LOC701504_LOC106993055 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 388 1273.97409707 2 8 0 TRUE 0 0 NA A coding 149 447 27 473 5 PB.6560.1 chr10 + 2049 1 intergenic novelGene_1525 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.5998.1 chr9 - 5672 1 genic FBXW4 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 4 4 NA FALSE 0 0 NA A coding 126 378 1966 2343 100 PB.9324.1 chr15 - 1741 2 full-splice_match LURAP1L rna50662 1782 2 37 4 multi-exon FALSE canonical 26 184 997 NA 4 0 0 FALSE 0 0 NA A coding 227 681 689 1369 10 PB.2045.1 chr3 + 2749 23 incomplete-splice_match BRWD1 rna10954 10112 42 279 7084 3prime_fragment FALSE canonical 34 167 69 519.742243809 9 0 0 FALSE 0 0 NA B coding 909 2727 21 2747 70 PB.6418.4 chr10 + 3612 30 full-splice_match XRN2 rna34954 3927 30 315 0 multi-exon FALSE canonical 24 50 349 494.270169037 3 1 0 FALSE 0 0 NA C coding 896 2688 437 3124 15 PB.2045.3 chr3 + 3907 19 incomplete-splice_match BRWD1 rna10955 9801 35 2602 3292 internal_fragment FALSE canonical 47 923 1971 353.431747301 2 1 0 FALSE 0 0 NA B coding 1247 3741 165 3905 70 PB.6418.3 chr10 + 2999 27 full-splice_match XRN2 rna34953 3413 27 379 35 multi-exon TRUE canonical 38 161 116 497.623351542 2 2 0 FALSE 0 0 NA C coding 784 2352 188 2539 70 PB.9191.1 chr15 + 1793 1 novel_in_catalog ABCA1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA B non_coding NA NA NA NA 75 PB.6418.1 chr10 + 3386 30 full-splice_match XRN2 rna34952 3765 30 379 0 multi-exon FALSE canonical 47 1012 116 404.907396821 66 1 0 FALSE 0 0 NA C coding 950 2850 42 2891 5 PB.2256.2 chr3 + 1620 9 fusion LOC705095_LOC106997453 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 438 553.666867349 3 5 0 TRUE 0 0 NA B coding 236 708 473 1180 30 PB.2920.1 chr4 + 3774 10 full-splice_match NFYA rna15939 6209 10 21 2414 multi-exon FALSE canonical 38 131 252 311.236244676 2 6 0 FALSE 0 0 NA A coding 347 1041 178 1218 40 PB.2256.6 chr3 + 1640 8 fusion LOC705095_LOC704883 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 524 540.016666409 3 2 0 TRUE 0 0 NA B coding 143 429 766 1194 15 PB.2256.4 chr3 + 1615 8 fusion LOC705095_LOC106997453 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 506 509.487978268 26 3 0 TRUE 0 0 NA B coding 188 564 154 717 15 PB.2256.5 chr3 + 1806 8 fusion LOC705095_LOC704883 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 700 512.332899588 3 0 0 TRUE 0 0 NA B coding 143 429 931 1359 15 PB.6975.4 chr11 - 2801 16 full-splice_match ITGB7 rna37974 3133 16 322 10 multi-exon FALSE canonical 19 52 171 96.441692229 48 0 0 FALSE 0 0 NA C coding 798 2394 175 2568 25 PB.4391.2 chr7 - 1989 7 full-splice_match NIPA2 rna23707 2404 7 9 406 multi-exon FALSE canonical 21 55 254 360.627231362 2 0 0 FALSE 0 0 NA C coding 360 1080 463 1542 15 PB.6478.2 chr10 - 2611 8 incomplete-splice_match MAPK1 rna35260 5282 9 392 2279 5prime_fragment FALSE canonical 48 1438 591 335.751396125 2 1 0 FALSE 0 0 NA A coding 263 789 159 947 30 PB.1966.1 chr2 - 6183 25 incomplete-splice_match ATP13A3 rna10523 7073 33 879 11 5prime_fragment FALSE canonical 48 1041 1022 447.002237131 2 6 0 FALSE 0 0 NA A coding 962 2886 60 2945 35 PB.2479.9 chr3 - 3322 24 novel_not_in_catalog SLC26A3 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 530 8 2 10 0 TRUE 0 0 NA C coding 758 2274 669 2942 20 PB.1143.3 chr1 + 3568 1 genic_intron novelGene_2645 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.5172.197 chr7 + 1511 9 fusion LOC720839_LOC711872_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 212 2616.16838143 2 13 0 TRUE 0 0 NA B coding 133 399 78 476 25 PB.4393.1 chr7 + 1324 10 full-splice_match SNURF rna23731 1371 10 45 2 multi-exon FALSE canonical 46 3215 884 2906.77862934 50 0 0 FALSE 0 0 NA A coding 240 720 465 1184 25 PB.7292.1 chr11 - 2013 1 genic_intron novelGene_2007 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.2995.1 chr4 + 2699 1 novel_in_catalog KIAA1586 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 10 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.10779.2 chr19 + 1716 12 full-splice_match CYP4F12 rna58208 1678 12 -35 -3 multi-exon FALSE canonical 10 155 279 66.2721661031 3 0 0 FALSE 0 0 NA C coding 524 1572 82 1653 10 PB.2635.1 chr3 + 886 2 full-splice_match GIMAP7 rna14220 1254 2 37 331 multi-exon FALSE canonical 41 1121 74 NA 13 0 0 FALSE 0 0 NA A coding 257 771 116 886 70 PB.10779.1 chr19 + 1696 13 full-splice_match CYP4F12 rna58205 1750 13 46 8 multi-exon FALSE canonical 6 25 66 98.051007134 11 0 0 FALSE 0 0 NA C coding 524 1572 68 1639 10 PB.8104.2 chr13 + 2690 8 novel_not_in_catalog MTHFD2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 915 229.07204107 4 4 0 TRUE 0 0 NA B coding 186 558 1118 1675 30 PB.2341.1 chr3 - 3620 2 novel_in_catalog GLCCI1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 408 1517 NA 4 1 0 FALSE 0 0 NA A coding 126 378 1262 1639 95 PB.1452.1 chr2 - 2072 10 full-splice_match MITF rna7765 4810 10 43 2695 multi-exon FALSE canonical 27 175 218 67.6535291023 4 1 0 FALSE 0 0 NA A coding 520 1560 115 1674 85 PB.7414.2 chr12 - 1335 2 full-splice_match TMEM177 rna40122 1359 2 20 4 multi-exon FALSE canonical 18 44 51 NA 5 0 0 FALSE 0 0 NA C coding 311 933 74 1006 0 PB.570.1 chr1 + 5655 1 genic_intron novelGene_1912 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A coding 198 594 2318 2911 90 PB.648.3 chr1 + 3677 1 incomplete-splice_match MAN1A2 rna3495 8188 13 4502 10 mono-exon FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 35 PB.2719.12 chr4 - 1503 1 novel_in_catalog NEDD9 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 6 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.1055.1 chr1 - 3039 4 incomplete-splice_match CEP350 rna5806 13273 39 8926 1308 5prime_fragment FALSE canonical 46 1194 205 173.602995366 2 0 0 FALSE 0 0 NA B coding 119 357 281 637 85 PB.1853.1 chr2 + 3252 6 novel_not_in_catalog DBR1 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 26 100.089959536 2 2 0 TRUE 0 0 NA A coding 290 870 151 1020 80 PB.5514.1 chr8 - 1557 9 full-splice_match DSCC1 rna29908 2374 9 140 677 multi-exon FALSE canonical 11 34 270 23.2594066992 2 4 0 FALSE 0 0 NA A coding 393 1179 89 1267 25 PB.11524.1 chr20 - 2010 14 full-splice_match LOC707412 rna62215 2007 14 -25 22 multi-exon FALSE canonical 9 80 170 279.724864823 55 0 0 FALSE 0 0 NA C coding 567 1701 119 1819 35 PB.11524.3 chr20 - 1715 13 full-splice_match LOC707412 rna62214 1801 13 63 23 multi-exon FALSE canonical 5 8 84 303.065999413 2 2 0 FALSE 0 0 NA C coding 431 1293 233 1525 35 PB.84.2 chr1 + 1521 10 novel_in_catalog MIIP novel NA NA NA NA combination_of_known_junctions FALSE canonical 5 5 67 67.9043444855 13 1 0 FALSE 0 0 NA A coding 381 1143 149 1291 20 PB.1696.6 chr2 - 1865 11 novel_not_in_catalog AP2M1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 503 1193.62096161 3 3 1 TRUE 0 0 NA C coding 251 753 634 1386 15 PB.6579.1 chr10 - 6987 1 antisense novelGene_GGA1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 4 NA FALSE 0 0 NA A coding 224 672 2606 3277 90 PB.1690.1 chr2 + 3179 24 novel_not_in_catalog CLCN2 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 3 3 524 46.0868744872 4 1 0 FALSE 0 0 NA C coding 867 2601 173 2773 25 PB.4971.4 chr7 + 3018 23 novel_not_in_catalog SYNE2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 6 10 100 367.914392216 2 1 0 FALSE 0 0 NA B coding 955 2865 152 3016 65 PB.1690.2 chr2 + 3230 24 full-splice_match CLCN2 rna9027 3409 24 175 4 multi-exon FALSE canonical 18 31 189 43.0464865001 16 0 0 FALSE 0 0 NA C coding 898 2694 127 2820 15 PB.4971.2 chr7 + 3016 23 novel_not_in_catalog SYNE2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 97 369.680943518 2 1 0 FALSE 0 0 NA B coding 956 2868 149 3016 70 PB.4971.3 chr7 + 3035 23 novel_not_in_catalog SYNE2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 114 369.680943518 2 2 0 TRUE 0 0 NA B coding 956 2868 167 3034 75 PB.9199.1 chr15 + 3065 15 full-splice_match TEX10 rna49938 3109 15 36 8 multi-exon FALSE canonical 33 94 167 128.249756335 19 1 0 FALSE 0 0 NA A coding 929 2787 177 2963 40 PB.4971.1 chr7 + 3047 23 incomplete-splice_match SYNE2 rna26818 21185 115 52 18086 3prime_fragment FALSE canonical 31 169 127 340.308683404 19 1 0 FALSE 0 0 NA B coding 956 2868 179 3046 75 PB.854.2 chr1 + 3658 1 novel_in_catalog HSD17B7 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.11239.1 chr20 - 3217 9 full-splice_match WDR24 rna60924 3516 9 292 7 multi-exon FALSE canonical 8 12 2922 69.4550214167 25 2 0 FALSE 0 0 NA C coding 790 2370 719 3088 15 PB.11239.2 chr20 - 1925 1 novel_in_catalog WDR24 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA C coding 223 669 760 1428 75 PB.8618.6 chr14 + 3569 23 novel_not_in_catalog EIF4G2 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 24 2827.2120543 3 1 0 TRUE 0 0 NA B coding 701 2103 701 2803 10 PB.8618.7 chr14 + 3545 22 novel_not_in_catalog EIF4G2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 18 39 34 2444.33958361 2 0 0 TRUE 0 0 NA B coding 919 2757 23 2779 10 PB.8618.4 chr14 + 2500 17 novel_not_in_catalog EIF4G2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 38 504 1621 2999.06318706 2 1 0 FALSE 0 0 NA B coding 487 1461 941 2401 20 PB.8618.5 chr14 + 3518 22 novel_not_in_catalog EIF4G2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 24 2449.80815575 5 1 0 TRUE 0 0 NA B coding 701 2103 650 2752 10 PB.8618.3 chr14 + 3669 21 novel_not_in_catalog EIF4G2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1602 2783.67652575 106 3 0 TRUE 0 0 NA B coding 412 1236 1671 2906 15 PB.8618.1 chr14 + 3602 22 novel_not_in_catalog EIF4G2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 39 1636 36 2235.47601195 1243 0 0 FALSE 0 0 NA B coding 701 2103 741 2843 20 PB.889.1 chr1 + 2953 9 full-splice_match SUSD4 rna4822 3064 9 115 -4 multi-exon FALSE canonical 27 172 840 168.665349138 2 2 0 FALSE 0 0 NA C coding 491 1473 114 1586 30 PB.6037.4 chr9 + 4165 15 full-splice_match ADD3 rna32897 4511 15 339 7 multi-exon FALSE canonical 26 155 74 1334.53100376 7 1 0 FALSE 0 0 NA C coding 706 2118 105 2222 45 PB.1696.5 chr2 - 4272 5 novel_in_catalog AP2M1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 1194 103 653.027564502 2 9 0 FALSE 0 0 NA C coding 148 444 147 590 15 PB.1712.4 chr2 - 1389 10 incomplete-splice_match TTC14 rna9158 2298 13 254 655 internal_fragment FALSE canonical 46 770 260 388.405715715 5 0 0 FALSE 0 0 NA C coding 430 1290 100 1389 10 PB.4010.1 chr6 - 504 4 full-splice_match RPS23 rna21782 502 4 -2 0 multi-exon FALSE canonical 45 14517 35 14073.1797047 4 0 0 FALSE 0 0 NA A coding 143 429 32 460 35 PB.1567.4 chr2 - 4049 6 novel_not_in_catalog WDR6 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2796 306.364162395 2 1 0 TRUE 0 0 NA C coding 943 2829 11 2839 10 PB.10584.1 chr19 + 1374 4 full-splice_match GADD45B rna57258 724 4 -73 -577 multi-exon FALSE canonical 45 533 276 139.082709206 33 0 0 FALSE 0 0 NA C coding 160 480 233 712 5 PB.10584.2 chr19 + 1514 1 genic GADD45B novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 6 0 NA FALSE 0 0 NA C coding 232 696 590 1285 75 PB.9316.1 chr15 + 6304 18 novel_not_in_catalog HAUS6 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 5486 139.423814322 2 27 0 TRUE 0 0 NA A coding 912 2736 372 3107 15 PB.6247.1 chr10 - 1629 14 full-splice_match IFT52 rna34057 1619 14 19 -29 multi-exon FALSE canonical 41 351 79 173.23971831 11 2 0 FALSE 0 0 NA A coding 437 1311 86 1396 35 PB.1567.2 chr2 - 4024 6 full-splice_match WDR6 rna8453 4132 6 93 15 multi-exon FALSE canonical 43 657 2908 75.2196782764 30 0 0 FALSE 0 0 NA C coding 1121 3363 7 3369 10 PB.2359.1 chr3 + 1252 5 full-splice_match TMEM243 rna12717 1259 5 1 6 multi-exon FALSE canonical 10 23 205 565.28488393 2 2 0 FALSE 0 0 NA A non_coding NA NA NA NA 15 PB.896.1 chr1 + 2531 4 full-splice_match DUSP10 rna4859 1681 4 -15 -835 multi-exon FALSE canonical 37 234 963 97.3755616158 2 4 0 FALSE 0 0 NA A coding 482 1446 153 1598 40 PB.7247.1 chr11 + 3985 22 novel_not_in_catalog ATP2A2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 3655 2609.21386628 2 14 1 TRUE 0 0 NA B coding 1042 3126 23 3148 45 PB.3103.1 chr4 + 3115 1 genic_intron novelGene_1911 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 10 NA FALSE 0 0 NA A coding 102 306 197 502 90 PB.6631.1 chr10 + 4256 4 full-splice_match TEF rna36118 4393 4 133 4 multi-exon FALSE canonical 25 135 134 369.758028987 2 5 0 FALSE 0 0 NA A coding 273 819 68 886 20 PB.5172.21 chr7 + 1544 10 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 217 3385.38638858 2 9 0 TRUE 0 0 NA B coding 470 1410 2 1411 15 PB.5172.20 chr7 + 1918 8 fusion LOC711872_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 376 3151.56580131 2 14 0 TRUE 0 0 NA B coding 375 1125 670 1794 35 PB.5172.23 chr7 + 1544 10 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 238 3385.38638858 2 8 0 TRUE 0 0 NA B coding 196 588 824 1411 15 PB.5172.22 chr7 + 1553 9 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 225 3136.36349934 2 20 0 TRUE 0 0 NA B coding 196 588 831 1418 15 PB.5172.25 chr7 + 1585 10 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 356 3488.1065064 3 4 0 TRUE 0 0 NA B coding 477 1431 18 1448 15 PB.5172.24 chr7 + 1558 9 fusion LOC708891_LOC711872_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 333 3474.13298536 2 15 0 TRUE 0 0 NA B coding 196 588 836 1423 15 PB.5172.27 chr7 + 1487 7 fusion LOC720839_LOC711872_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 381 2609.07454857 3 9 0 TRUE 0 0 NA B coding 475 1425 18 1442 20 PB.5172.26 chr7 + 1571 8 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 381 3335.83752602 2 12 0 TRUE 0 0 NA B coding 196 588 850 1437 15 PB.5172.29 chr7 + 1522 8 fusion LOC720839_LOC711872_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 217 2640.15170019 3 11 0 TRUE 0 0 NA B coding 492 1476 2 1477 20 PB.4227.1 chr6 + 3283 23 full-splice_match ARHGAP26 rna22858 3378 23 94 1 multi-exon FALSE canonical 22 65 2355 461.186513246 5 1 0 FALSE 0 0 NA C coding 759 2277 257 2533 75 PB.4227.2 chr6 + 2968 23 novel_not_in_catalog ARHGAP26 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 72 503.369645489 2 2 0 FALSE 0 0 NA C coding 679 2037 159 2195 25 PB.4227.3 chr6 + 3610 1 novel_in_catalog ARHGAP26 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.4227.4 chr6 + 3609 19 novel_in_catalog ARHGAP26 novel NA NA NA NA combination_of_known_junctions FALSE canonical 22 65 1717 495.246403319 2 1 0 FALSE 0 0 NA C coding 567 1701 195 1895 45 PB.11231.1 chr20 + 1512 9 novel_in_catalog DECR2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 18 53 307 58.8897274573 3 2 0 FALSE 0 0 NA C coding 292 876 107 982 10 PB.11231.2 chr20 + 1542 9 full-splice_match DECR2 rna60880 1550 9 14 -6 multi-exon FALSE canonical 19 53 302 121.544230632 17 0 0 FALSE 0 0 NA C coding 292 876 102 977 10 PB.4321.10 chr6 - 5479 18 novel_not_in_catalog STK10 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1033 215.844851688 3 7 0 FALSE 0 0 NA B coding 559 1677 1108 2784 20 PB.6692.1 chr10 + 1397 2 novel_in_catalog PIM3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 113 265 NA 2 2 0 FALSE 0 0 NA A non_coding NA NA NA NA 35 PB.3996.2 chr6 + 3664 9 full-splice_match SCAMP1 rna21708 5089 9 130 1295 multi-exon FALSE canonical 45 1447 766 495.268613986 9 3 0 FALSE 0 0 NA C coding 338 1014 33 1046 20 PB.6776.4 chr11 - 1528 13 incomplete-splice_match A2M rna36880 4887 36 3356 3 5prime_fragment FALSE canonical 31 3935 747 737.591350275 4 0 0 FALSE 0 0 NA C coding 267 801 613 1413 0 PB.3996.1 chr6 + 5852 10 novel_not_in_catalog SCAMP1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 5242 825.46956334 2 14 0 TRUE 0 0 NA C coding 338 1014 121 1134 15 PB.12002.1 chrX + 2298 2 full-splice_match HNRNPH2 rna64531 2394 2 88 8 multi-exon FALSE canonical 48 2896 94 NA 5 0 0 FALSE 0 0 NA A coding 449 1347 148 1494 35 PB.6776.3 chr11 - 4597 36 full-splice_match A2M rna36880 4887 36 277 13 multi-exon FALSE canonical 31 2957 1921 1298.94996055 115 0 0 FALSE 0 0 NA C coding 1474 4422 71 4492 10 PB.1604.3 chr2 - 2693 2 genic CCR2 novel NA NA NA NA no_subcategory FALSE canonical 2 2 70 NA 2 2 0 FALSE 0 0 NA C non_coding NA NA NA NA 45 PB.2750.1 chr4 + 2849 13 full-splice_match CAP2 rna14763 2864 13 10 5 multi-exon FALSE canonical 21 546 83 233.869621798 28 0 0 FALSE 0 0 NA A coding 477 1431 85 1515 35 PB.3113.1 chr4 - 1742 1 full-splice_match LOC709077 rna16972 1753 1 -5 16 mono-exon FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A coding 177 531 449 979 60 PB.5206.1 chr8 - 2770 1 genic_intron novelGene_286 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.2617.1 chr3 - 3306 18 full-splice_match EPHA1 rna14066 3349 18 30 13 multi-exon FALSE canonical 5 7 892 35.4682957019 3 3 0 FALSE 0 0 NA A coding 978 2934 52 2985 45 PB.3952.3 chr6 + 2828 7 incomplete-splice_match SREK1 rna21517 6603 12 821 2954 internal_fragment FALSE canonical 47 941 640 575.327732688 2 0 0 FALSE 0 0 NA B coding 71 213 816 1028 35 PB.1604.1 chr2 - 3545 2 genic CCR2 novel NA NA NA NA no_subcategory FALSE canonical 26 192 76 NA 61 1 0 FALSE 0 0 NA C coding 360 1080 123 1202 60 PB.11338.1 chr20 + 1595 1 intergenic novelGene_280 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.5172.45 chr7 + 1493 8 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 250 2724.88531869 4 15 0 TRUE 0 0 NA B coding 110 330 17 346 15 PB.11376.1 chr20 - 1669 1 novel_in_catalog RPS15A novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.3952.1 chr6 + 1450 9 incomplete-splice_match SREK1 rna21513 7159 12 488 5221 3prime_fragment FALSE canonical 46 585 337 524.459722 15 1 0 FALSE 0 0 NA B coding 469 1407 43 1449 65 PB.1140.1 chr1 - 3528 26 full-splice_match NUP133 rna6228 4212 26 86 598 multi-exon FALSE canonical 42 446 233 291.823576841 40 0 0 FALSE 0 0 NA C coding 1156 3468 52 3519 35 PB.11106.4 chr19 - 3030 10 novel_not_in_catalog SIGLEC11 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1914 239.662262361 2 5 0 TRUE 0 0 NA B coding 345 1035 44 1078 90 PB.11585.1 chr20 - 1515 12 full-splice_match ACD rna62542 2039 12 500 24 multi-exon FALSE canonical 17 26 413 42.7434205463 3 0 0 FALSE 0 0 NA C coding 455 1365 78 1442 35 PB.11106.1 chr19 - 2597 10 novel_not_in_catalog SIGLEC11 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1179 230.935055806 47 2 1 TRUE 0 0 NA B coding 345 1035 159 1193 85 PB.11106.2 chr19 - 2574 11 novel_not_in_catalog SIGLEC11 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1058 245.444494744 3 21 0 TRUE 0 0 NA B coding 345 1035 38 1072 95 PB.10664.1 chr19 + 4421 35 full-splice_match PNPLA6 rna57564 4525 35 97 7 multi-exon FALSE canonical 6 6 2198 151.753088931 4 1 0 FALSE 0 0 NA C coding 1326 3978 246 4223 20 PB.587.2 chr1 - 1695 8 full-splice_match PSRC1 rna3202 1748 8 50 3 multi-exon FALSE canonical 13 23 733 20.6397674406 2 1 0 FALSE 0 0 NA C coding 332 996 103 1098 30 PB.10664.3 chr19 + 4203 32 full-splice_match PNPLA6 rna57569 4383 32 173 7 multi-exon FALSE canonical 6 6 1978 152.908469353 36 1 0 FALSE 0 0 NA C coding 1313 3939 65 4003 20 PB.10664.2 chr19 + 4280 33 novel_in_catalog PNPLA6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 6 6 2056 152.161098839 6 0 0 FALSE 0 0 NA C coding 1326 3978 104 4081 20 PB.2109.1 chr3 - 2001 1 genic_intron novelGene_726 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.10664.7 chr19 + 3368 25 novel_in_catalog PNPLA6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 6 6 1150 132.664991614 2 0 0 FALSE 0 0 NA C coding 1055 3165 11 3175 25 PB.8070.2 chr13 + 2857 1 genic_intron novelGene_1429 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.5708.2 chr9 + 3011 10 full-splice_match BMI1 rna30858 1248 10 -18 -1745 multi-exon FALSE canonical 11 19 68 520.176892989 4 0 0 FALSE 0 0 NA C coding 326 978 88 1065 30 PB.5708.1 chr9 + 2983 10 full-splice_match BMI1 rna30855 3282 10 335 -36 multi-exon FALSE canonical 41 990 226 285.464533699 15 0 0 FALSE 0 0 NA C coding 326 978 246 1223 30 PB.1134.1 chr1 + 2754 1 genic_intron novelGene_2644 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.11417.10 chr20 - 1586 1 genic_intron novelGene_525 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.3229.1 chr4 + 2856 13 full-splice_match CEP85L rna17564 3220 13 348 16 multi-exon FALSE canonical 46 208 335 269.429025905 9 2 0 FALSE 0 0 NA C coding 806 2418 263 2680 75 PB.4782.1 chr7 + 2714 2 antisense novelGene_SNRPA1_AS novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 2709 NA 8 2 0 FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.3738.1 chr5 + 3077 1 genic_intron novelGene_2371 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.10032.2 chr16 + 3814 27 novel_in_catalog LOC707287 novel NA NA NA NA combination_of_known_junctions FALSE canonical 10 19 782 62.6178888178 2 0 0 FALSE 0 0 NA B coding 1102 3306 259 3564 0 PB.6968.1 chr11 - 1713 8 full-splice_match KRT8 rna37948 1704 8 -6 -3 multi-exon FALSE canonical 17 103 1323 333.115595552 996 1 0 FALSE 0 0 NA C coding 483 1449 63 1511 50 PB.1484.1 chr2 + 2998 1 genic LOC106996898 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.7461.1 chr12 + 1396 1 genic_intron novelGene_668 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.9225.1 chr15 - 2855 13 full-splice_match IPPK rna50039 3026 13 160 11 multi-exon FALSE canonical 35 104 1030 99.538937105 6 2 0 FALSE 0 0 NA A coding 491 1473 115 1587 35 PB.4245.1 chr6 - 1661 10 full-splice_match CSNK1A1 rna22994 2598 10 60 877 multi-exon FALSE canonical 48 2254 1433 1238.28187421 75 1 1 FALSE 0 0 NA C coding 337 1011 428 1438 25 PB.3819.1 chr6 - 2735 1 genic_intron novelGene_156 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 11 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.2518.2 chr3 - 3032 19 novel_not_in_catalog POT1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 26 231.874966307 3 3 1 FALSE 0 0 NA C coding 634 1902 428 2329 25 PB.1586.1 chr2 + 2882 1 genic_intron novelGene_1752 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 9 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.6523.1 chr10 - 1852 9 full-splice_match TBC1D10A rna35613 2041 9 186 3 multi-exon FALSE canonical 30 66 1021 69.8498389404 27 1 0 FALSE 0 0 NA A coding 420 1260 236 1495 30 PB.5172.340 chr7 + 1559 9 fusion LOC720839_LOC708891 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 365 3692.33381481 2 11 0 TRUE 0 0 NA A coding 196 588 837 1424 15 PB.4279.2 chr6 + 4380 1 novel_in_catalog SAP30L novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA B coding 120 360 2006 2365 80 PB.2325.1 chr3 + 1792 12 full-splice_match BZW2 rna12486 2146 12 343 11 multi-exon FALSE canonical 38 436 102 384.251219907 36 4 0 FALSE 0 0 NA C coding 419 1257 110 1366 35 PB.3274.1 chr4 + 1697 6 novel_in_catalog WTAP novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 462 195 779.92307313 8 0 0 FALSE 0 0 NA B coding 151 453 204 656 20 PB.2325.2 chr3 + 1812 12 novel_not_in_catalog BZW2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 109 487.275076317 2 0 0 TRUE 0 0 NA C coding 419 1257 120 1376 20 PB.6752.2 chr11 + 3452 11 novel_in_catalog ENO2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 37 2373 1554 607.522839077 2 6 0 FALSE 0 0 NA B coding 434 1302 1245 2546 15 PB.6752.1 chr11 + 2594 11 novel_in_catalog ENO2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 27 1217 99 883.37930698 2 4 0 FALSE 0 0 NA B coding 356 1068 112 1179 10 PB.157.1 chr1 - 2968 1 genic_intron novelGene_496 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.2261.23 chr3 + 3651 1 genic_intron novelGene_1449 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A coding 154 462 79 540 85 PB.3547.1 chr5 - 3449 18 full-splice_match EXOC1 rna19245 3504 18 49 6 multi-exon FALSE canonical 47 364 289 267.374269517 12 0 0 FALSE 0 0 NA C coding 879 2637 300 2936 45 PB.3547.2 chr5 - 3278 18 full-splice_match EXOC1 rna19244 3292 18 -10 24 multi-exon FALSE canonical 47 520 1471 240.964727709 14 6 0 FALSE 0 0 NA C coding 879 2637 142 2778 50 PB.3547.3 chr5 - 3358 19 full-splice_match EXOC1 rna19242 3368 19 9 1 multi-exon FALSE canonical 27 371 1522 291.024053989 10 0 0 FALSE 0 0 NA C coding 894 2682 148 2829 30 PB.3547.4 chr5 - 3494 19 full-splice_match EXOC1 rna19243 3526 19 15 17 multi-exon FALSE canonical 27 364 289 310.402963903 2 3 0 FALSE 0 0 NA C coding 894 2682 300 2981 45 PB.3547.5 chr5 - 3994 4 novel_in_catalog EXOC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 364 293 371.245201989 2 10 0 FALSE 0 0 NA C coding 142 426 304 729 65 PB.8233.1 chr13 - 5626 9 full-splice_match ZC3H8 rna44509 1806 9 5 -3825 multi-exon FALSE canonical 34 131 865 49.6588360717 2 4 0 FALSE 0 0 NA A coding 295 885 121 1005 35 PB.5594.1 chr8 + 2644 4 novel_not_in_catalog ZNF696 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 275 16.0312195419 2 4 0 TRUE 0 0 NA A coding 358 1074 367 1440 50 PB.6362.2 chr10 - 2900 22 novel_not_in_catalog ADAM33 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2380 24.248711306 16 2 0 TRUE 0 0 NA B coding 798 2394 49 2442 45 PB.6362.3 chr10 - 2916 21 novel_in_catalog ADAM33 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical 0 0 1449 23.769728648 6 5 0 FALSE 0 0 NA B coding 801 2403 49 2451 25 PB.2261.29 chr3 + 3436 1 genic_intron novelGene_1455 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.6362.1 chr10 - 2752 20 novel_not_in_catalog ADAM33 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2231 20.760539492 4 0 0 TRUE 0 0 NA B coding 747 2241 53 2293 45 PB.6362.4 chr10 - 3438 21 novel_not_in_catalog ADAM33 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1430 23.7907545067 2 1 0 FALSE 0 0 NA B coding 801 2403 30 2432 45 PB.5996.1 chr9 + 3111 12 full-splice_match SFXN3 rna32675 2650 12 58 -519 multi-exon FALSE canonical 5 5 272 116.223921806 5 17 0 FALSE 0 0 NA C coding 321 963 445 1407 10 PB.5996.2 chr9 + 2715 11 incomplete-splice_match SFXN3 rna32675 2650 12 455 -520 internal_fragment FALSE canonical 30 195 818 79.9749960925 64 8 0 FALSE 0 0 NA C coding 321 963 48 1010 10 PB.5996.3 chr9 + 2803 10 novel_in_catalog SFXN3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 30 195 907 84.2555636145 4 9 0 FALSE 0 0 NA C coding 321 963 137 1099 10 PB.9947.3 chr16 - 1223 6 full-splice_match CD79B rna53960 1210 6 46 -59 multi-exon FALSE canonical 30 563 112 501.407020294 28 0 0 FALSE 0 0 NA C coding 231 693 46 738 25 PB.11213.1 chr19 + 2982 5 full-splice_match ZNF667 rna60762 2350 5 81 -713 multi-exon FALSE canonical 25 77 43 54.9272245794 2 0 0 FALSE 0 0 NA A coding 610 1830 102 1931 40 PB.1456.2 chr2 + 1478 18 full-splice_match UBA3 rna7785 2100 18 15 607 multi-exon FALSE canonical 39 655 27 334.514573674 24 0 0 FALSE 0 0 NA C coding 463 1389 8 1396 25 PB.9072.1 chr15 + 1691 6 full-splice_match ST6GALNAC4 rna49313 1710 6 16 3 multi-exon FALSE canonical 20 61 488 95.0315737005 19 0 0 FALSE 0 0 NA A coding 302 906 291 1196 15 PB.1785.1 chr2 - 700 3 full-splice_match SERP1 rna9490 3714 3 795 2219 multi-exon FALSE canonical 48 2088 348 144.499134946 60 0 0 FALSE 0 0 NA A non_coding NA NA NA NA 35 PB.10243.1 chr17 + 1519 6 full-splice_match ITM2B rna55285 1824 6 126 179 multi-exon FALSE canonical 48 7133 196 3848.32885809 335 0 0 FALSE 0 0 NA A coding 266 798 80 877 20 PB.4621.2 chr7 + 2192 14 full-splice_match PIAS1 rna24916 2177 14 1 -16 multi-exon FALSE canonical 41 350 1633 186.719040272 28 0 0 FALSE 0 0 NA C coding 651 1953 10 1962 75 PB.4621.3 chr7 + 1322 2 novel_in_catalog PIAS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 702 33 NA 7 0 0 FALSE 0 0 NA C coding 161 483 10 492 85 PB.1140.2 chr1 - 5865 25 novel_in_catalog NUP133 novel NA NA NA NA combination_of_known_junctions FALSE canonical 42 446 291 277.045122679 2 13 0 FALSE 0 0 NA C coding 1044 3132 110 3241 20 PB.4621.1 chr7 + 2760 7 novel_in_catalog PIAS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 637 837 137.836860092 24 1 0 FALSE 0 0 NA C coding 339 1017 10 1026 95 PB.4621.6 chr7 + 1676 8 novel_not_in_catalog PIAS1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 8 9 943 294.136022955 2 1 0 FALSE 0 0 NA C coding 326 978 10 987 80 PB.4621.4 chr7 + 3796 13 novel_in_catalog PIAS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 350 1636 183.586491878 2 8 0 FALSE 0 0 NA C coding 567 1701 13 1713 75 PB.1579.2 chr2 + 1546 3 incomplete-splice_match SHISA5 rna8503 1866 4 318 2 internal_fragment FALSE canonical 46 491 329 492.499746193 314 0 0 FALSE 0 0 NA B coding 61 183 224 406 5 PB.4818.1 chr7 - 3686 11 full-splice_match SLC7A8 rna26035 3505 11 17 -198 multi-exon FALSE canonical 23 368 732 101.133575038 3 0 0 FALSE 0 0 NA A coding 535 1605 225 1829 20 PB.4621.8 chr7 + 2602 1 novel_in_catalog PIAS1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 6 5 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.4621.9 chr7 + 3795 1 genic PIAS1 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.6085.4 chr9 + 2598 7 novel_in_catalog BUB3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 815 1053 205.431253708 6 1 0 FALSE 0 0 NA C coding 328 984 83 1066 15 PB.3523.1 chr5 - 4115 1 genic_intron novelGene_1265 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 10 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.1744.1 chr2 + 1756 1 genic_intron novelGene_2106 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 12 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.9684.1 chr16 + 1526 8 full-splice_match TMEM98 rna52503 1811 8 274 11 multi-exon FALSE canonical 27 95 70 110.679718106 35 0 0 FALSE 0 0 NA A coding 226 678 201 878 15 PB.1117.1 chr1 + 1611 8 full-splice_match CD247 rna6157 1716 8 102 3 multi-exon FALSE canonical 32 374 363 347.337012137 93 0 0 FALSE 0 0 NA C coding 166 498 64 561 20 PB.6358.2 chr10 - 2829 2 full-splice_match FASTKD5 rna34648 2865 2 33 3 multi-exon FALSE canonical 36 185 95 NA 51 1 0 FALSE 0 0 NA A coding 764 2292 286 2577 20 PB.7042.1 chr11 - 5651 4 genic_intron novelGene_1155 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 2344 0 2 13 0 FALSE 0 0 NA A coding 102 306 1092 1397 75 PB.3885.1 chr6 + 2783 1 antisense novelGene_LOC699370_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.5991.7 chr9 + 4068 15 novel_not_in_catalog SEMA4G novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 42 26.1725046566 7 3 0 TRUE 0 0 NA B coding 840 2520 62 2581 20 PB.1885.1 chr2 - 3094 3 full-splice_match DPH3 rna10092 671 3 -2 -2421 multi-exon FALSE canonical 46 596 195 26.495282599 27 1 0 FALSE 0 0 NA C coding 82 246 88 333 10 PB.11575.1 chr20 - 2832 2 full-splice_match B3GNT9 rna62475 3842 2 979 31 multi-exon FALSE canonical 0 0 307 NA 6 0 0 FALSE 0 0 NA A coding 401 1203 492 1694 55 PB.4924.1 chr7 - 3183 1 genic_intron novelGene_2012 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 9 5 NA FALSE 0 0 NA A coding 103 309 2688 2996 85 PB.3014.1 chr4 - 2605 11 full-splice_match SLC17A5 rna16547 1593 11 -11 -1001 multi-exon FALSE canonical 43 249 178 246.568448914 23 2 0 FALSE 0 0 NA A coding 495 1485 85 1569 80 PB.176.1 chr1 - 6303 1 antisense novelGene_NIPAL3_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 14 NA FALSE 0 0 NA A coding 104 312 4290 4601 90 PB.4350.1 chr6 - 1617 8 full-splice_match LMAN2 rna23453 1851 8 225 9 multi-exon FALSE canonical 48 1151 917 781.976981758 124 2 0 FALSE 0 0 NA A coding 356 1068 8 1075 20 PB.1441.2 chr2 - 1676 1 novel_in_catalog TRNT1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.2710.1 chr4 + 4160 24 full-splice_match DSP rna14591 7995 24 166 3669 multi-exon FALSE canonical 16 194 480 293.518312887 11 2 0 FALSE 0 0 NA C coding 1283 3849 311 4159 55 PB.830.1 chr1 + 2629 7 full-splice_match SLAMF7 rna4546 1283 7 172 -1518 multi-exon FALSE canonical 24 106 702 40.4474968323 16 1 0 FALSE 0 0 NA A coding 335 1005 54 1058 95 PB.2710.3 chr4 + 4040 2 incomplete-splice_match DSP rna14590 9792 24 5748 4 internal_fragment FALSE canonical 24 574 107 NA 2 2 0 FALSE 0 0 NA C coding 894 2682 660 3341 20 PB.2710.2 chr4 + 3546 23 incomplete-splice_match DSP rna14591 7995 24 235 4214 3prime_fragment FALSE canonical 16 194 411 275.434202669 10 0 0 FALSE 0 0 NA C coding 1101 3303 242 3544 55 PB.5079.5 chr7 - 3027 1 novel_in_catalog CCDC88C novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 13 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.8144.1 chr13 + 2783 1 incomplete-splice_match RMND5A rna44082 5594 8 2809 3 mono-exon FALSE canonical NA NA NA NA 4 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 15 PB.10800.2 chr19 + 2564 2 genic_intron novelGene_393 novel NA NA NA NA no_subcategory TRUE canonical 0 0 2510 NA 2 3 0 FALSE 0 0 NA A coding 104 312 497 808 90 PB.4799.1 chr7 - 1712 1 intergenic novelGene_1591 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.8223.1 chr13 - 2767 11 full-splice_match SEPT10 rna44481 3090 11 315 8 multi-exon FALSE canonical 26 276 107 586.203889445 38 0 0 FALSE 0 0 NA A coding 454 1362 78 1439 35 PB.535.4 chr1 + 3225 1 novel_in_catalog MTF2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.535.2 chr1 + 3226 15 full-splice_match MTF2 rna2954 4113 15 53 834 multi-exon FALSE canonical 45 473 1224 162.6960356 6 6 0 FALSE 0 0 NA C coding 593 1779 236 2014 20 PB.535.1 chr1 + 1418 12 incomplete-splice_match MTF2 rna2954 4113 15 44 2651 3prime_fragment FALSE canonical 45 473 1233 173.346473861 8 0 0 FALSE 0 0 NA C coding 391 1173 245 1417 65 PB.640.1 chr1 - 2582 11 full-splice_match CASQ2 rna3458 2704 11 98 24 multi-exon FALSE canonical 11 1138 596 211.378806885 2 2 0 FALSE 0 0 NA A coding 400 1200 177 1376 45 PB.286.1 chr1 - 1282 5 full-splice_match TRAPPC3 rna1490 1259 5 -26 3 multi-exon FALSE canonical 46 1459 155 261.398163727 16 2 0 FALSE 0 0 NA A coding 180 540 114 653 15 PB.8465.12 chr14 - 2597 1 novel_in_catalog MS4A1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 65 PB.8465.11 chr14 - 3096 1 novel_in_catalog MS4A1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.5306.1 chr8 + 3830 22 full-splice_match ADAM9 rna28853 4048 22 208 10 multi-exon FALSE canonical 43 293 171 302.410317284 46 1 0 FALSE 0 0 NA A coding 819 2457 75 2531 15 PB.8616.1 chr14 - 4483 28 full-splice_match USP47 rna46770 7780 28 554 2743 multi-exon FALSE canonical 48 872 244 462.048698732 13 0 0 FALSE 0 0 NA A coding 1355 4065 206 4270 40 PB.11203.1 chr19 + 3053 4 full-splice_match ZNF416 rna60701 3243 4 179 11 multi-exon FALSE canonical 35 139 203 89.258052858 7 0 0 FALSE 0 0 NA A coding 594 1782 171 1952 25 PB.5172.115 chr7 + 1505 7 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 380 2636.9660597 2 17 0 TRUE 0 0 NA B coding 481 1443 17 1459 25 PB.5172.444 chr7 + 1601 10 novel_not_in_catalog LOC721089 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 415 1847.80004329 5 9 0 TRUE 0 0 NA B coding 462 1386 79 1464 15 PB.5172.113 chr7 + 1496 10 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 237 2184.38412373 3 13 0 TRUE 0 0 NA B coding 245 735 711 1445 15 PB.5172.446 chr7 + 1572 7 fusion LOC708891_LOC721089 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 429 3498.47295259 3 2 0 TRUE 0 0 NA B coding 453 1359 79 1437 15 PB.7237.1 chr11 + 3495 1 novel_in_catalog ACACB novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA B coding 107 321 806 1126 60 PB.5172.448 chr7 + 1630 7 fusion LOC708891_LOC711872_LOC721089 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 447 3630.9493249 2 5 0 TRUE 0 0 NA B coding 196 588 909 1496 15 PB.7537.1 chr12 + 1623 12 full-splice_match SSB rna40682 1660 12 29 8 multi-exon FALSE canonical 48 2649 96 862.236046567 73 2 0 FALSE 0 0 NA C coding 405 1215 106 1320 35 PB.6.1 chr1 - 1800 7 full-splice_match SDF4 rna45 2088 7 128 160 multi-exon FALSE canonical 25 51 99 619.815295068 102 0 0 FALSE 0 0 NA A coding 362 1086 252 1337 40 PB.1153.1 chr1 + 3483 5 full-splice_match SPRTN rna6275 3592 5 100 9 multi-exon FALSE canonical 46 194 802 117.175082675 4 19 0 FALSE 0 0 NA A coding 488 1464 353 1816 30 PB.5172.118 chr7 + 1486 9 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 216 2245.43603783 2 12 0 TRUE 0 0 NA B coding 241 723 719 1441 20 PB.4253.2 chr6 + 4389 24 incomplete-splice_match TCOF1 rna23034 4643 27 -54 308 3prime_fragment FALSE canonical 23 69 3562 84.5931439302 9 9 0 FALSE 0 0 NA A coding 1445 4335 55 4389 15 PB.8743.2 chr14 - 7185 1 genic_intron novelGene_1503 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA A coding 100 300 5527 5826 75 PB.6554.4 chr10 + 2989 2 genic_intron novelGene_1519 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 2836 NA 3 34 1 FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.182.1 chr1 - 1732 7 full-splice_match SYF2 rna922 2240 7 862 -354 multi-exon FALSE canonical 42 363 81 978.689940686 5 3 0 FALSE 0 0 NA C coding 243 729 58 786 35 PB.182.2 chr1 - 1673 6 novel_in_catalog SYF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 42 363 59 748.72157709 2 1 0 FALSE 0 0 NA C coding 116 348 36 383 35 PB.4911.4 chr7 - 1446 2 antisense novelGene_GNG2_AS novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 20 NA 3 0 0 FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.4810.2 chr7 - 2267 12 novel_not_in_catalog SLC7A7 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 4 4 62 319.385347191 2 3 0 TRUE 0 0 NA C coding 511 1533 353 1885 30 PB.11837.1 chrX + 2036 9 full-splice_match ATP6AP2 rna63653 1981 9 -1 -54 multi-exon FALSE canonical 48 834 142 1038.04094332 58 0 0 FALSE 0 0 NA A coding 350 1050 106 1155 25 PB.4911.2 chr7 - 4073 1 genic_intron novelGene_1976 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.4911.3 chr7 + 3340 2 incomplete-splice_match GNG2 rna26563 3648 4 300 8 internal_fragment FALSE canonical 48 1464 104 NA 2 1 0 FALSE 0 0 NA B coding 102 306 1387 1692 30 PB.10063.4 chr16 - 2971 19 novel_in_catalog TMC6 novel NA NA NA NA combination_of_known_junctions TRUE canonical 19 48 805 272.46467661 2 11 1 FALSE 0 0 NA C coding 675 2025 170 2194 10 PB.4245.6 chr6 - 3267 1 novel_in_catalog CSNK1A1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 6 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.7263.2 chr11 + 1698 1 incomplete-splice_match SH2B3 rna39345 5135 8 3433 5 mono-exon FALSE canonical NA NA NA NA 8 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 25 PB.10056.9 chr16 + 1647 1 novel_in_catalog SEC14L1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 6 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.8787.2 chr14 - 1586 5 full-splice_match TMEM123 rna47751 1102 5 -187 -297 multi-exon FALSE canonical 46 1269 479 1152.97571527 320 1 0 FALSE 0 0 NA C coding 207 621 380 1000 60 PB.10056.4 chr16 + 5800 16 novel_in_catalog SEC14L1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 302 75 185.148588977 2 9 0 FALSE 0 0 NA C coding 641 1923 211 2133 45 PB.10056.7 chr16 + 5510 3 novel_not_in_catalog SEC14L1 novel NA NA NA NA not any annotated donor/acceptor TRUE non_canonical 0 0 2761 0 2 30 0 TRUE 0 0 NA C non_coding NA NA NA NA 65 PB.2835.1 chr4 - 3966 28 full-splice_match EHMT2 rna15529 3977 28 2 9 multi-exon FALSE canonical 9 12 64 206.978259728 30 3 0 FALSE 0 0 NA A coding 1209 3627 23 3649 30 PB.10724.1 chr19 + 1505 7 full-splice_match CNN1 rna57911 1633 7 127 1 multi-exon FALSE canonical 8 15 726 82.3225364041 584 0 0 FALSE 0 0 NA A coding 297 891 79 969 15 PB.10056.2 chr16 + 2665 17 full-splice_match SEC14L1 rna54410 4706 17 16 2025 multi-exon FALSE canonical 40 276 2083 197.744785013 5 2 0 FALSE 0 0 NA C coding 715 2145 221 2365 45 PB.10056.3 chr16 + 1480 1 novel_in_catalog SEC14L1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 95 PB.991.1 chr1 + 2975 10 novel_in_catalog PTPN7 novel NA NA NA NA combination_of_known_junctions FALSE canonical 11 67 58 117.481913502 14 5 0 FALSE 0 0 NA B coding 360 1080 245 1324 15 PB.495.1 chr1 - 2560 13 novel_in_catalog MCOLN2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 3 3 316 29.478805946 3 0 0 FALSE 0 0 NA C coding 394 1182 596 1777 90 PB.495.2 chr1 - 2707 14 full-splice_match MCOLN2 rna2790 3057 14 13 337 multi-exon FALSE canonical 16 27 1074 24.1660919472 33 0 0 FALSE 0 0 NA C coding 566 1698 228 1925 85 PB.3530.1 chr5 - 488 5 full-splice_match FDCSP rna19113 521 5 24 9 multi-exon FALSE canonical 0 0 143 0 7 2 0 FALSE 0 0 NA A coding 84 252 57 308 30 PB.5466.1 chr8 - 1513 1 genic_intron novelGene_1792 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.1885.2 chr2 - 3016 2 full-splice_match DPH3 rna10091 3047 2 23 8 multi-exon FALSE canonical 45 347 197 NA 13 0 0 FALSE 0 0 NA C non_coding NA NA NA NA 20 PB.3026.2 chr4 + 4595 5 novel_not_in_catalog SH3BGRL2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 160 501.777839287 2 27 0 TRUE 0 0 NA C coding 67 201 241 441 20 PB.104.2 chr1 + 1461 1 incomplete-splice_match SPEN rna553 12046 15 3318 7268 mono-exon FALSE canonical NA NA NA NA 5 0 NA FALSE 0 0 NA A coding 421 1263 199 1461 75 PB.4810.3 chr7 - 2240 11 full-splice_match SLC7A7 rna25979 2985 11 740 5 multi-exon FALSE canonical 32 138 154 270.190673414 3 1 0 FALSE 0 0 NA C coding 511 1533 326 1858 30 PB.3026.1 chr4 + 3214 4 full-splice_match SH3BGRL2 rna16609 4967 4 383 1370 multi-exon FALSE canonical 30 561 148 208.686367547 7 3 0 FALSE 0 0 NA C coding 107 321 104 424 20 PB.10069.4 chr16 - 3386 14 novel_not_in_catalog CYTH1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 5 6 969 301.759838282 13 1 0 FALSE 0 0 NA C coding 400 1200 150 1349 15 PB.5840.1 chr9 + 1931 7 full-splice_match C9H10orf54 rna31870 1050 7 9 -890 multi-exon FALSE canonical 45 342 144 383.29753456 309 0 0 FALSE 0 0 NA C coding 311 933 63 995 25 PB.8787.6 chr14 - 3320 6 novel_not_in_catalog TMEM123 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 147 1578.82931313 2 4 1 TRUE 0 0 NA C coding 125 375 384 758 35 PB.3968.1 chr6 + 3661 17 full-splice_match MCCC2 rna21599 3684 17 18 5 multi-exon FALSE canonical 35 202 261 134.848062648 8 1 0 FALSE 0 0 NA A coding 563 1689 133 1821 25 PB.12120.7 chrX - 3380 21 novel_in_catalog ARHGAP4 novel NA NA NA NA combination_of_known_junctions FALSE canonical 20 48 176 210.513657514 9 1 0 FALSE 0 0 NA C coding 641 1923 110 2032 15 PB.2518.4 chr3 - 3115 20 novel_not_in_catalog POT1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 477 299.763239908 2 9 0 TRUE 0 0 NA C coding 634 1902 513 2414 30 PB.2815.1 chr4 + 1410 4 full-splice_match LTA rna15437 2234 4 821 3 multi-exon FALSE canonical 1 1 158 4.24264068712 5 0 0 FALSE 0 0 NA A coding 205 615 168 782 10 PB.6826.1 chr11 + 3348 1 genic AEBP2 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 35 PB.5033.2 chr7 + 6169 17 incomplete-splice_match YLPM1 rna27178 7749 19 14 1566 3prime_fragment FALSE canonical 26 81 983 175.322559872 2 1 0 FALSE 0 0 NA C coding 2019 6057 111 6167 65 PB.2142.1 chr3 - 2757 5 full-splice_match FSCN1 rna11495 2776 5 10 9 multi-exon FALSE canonical 31 353 1232 84.5399313934 33 2 0 FALSE 0 0 NA A coding 493 1479 122 1600 10 PB.5172.161 chr7 + 1489 8 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 255 2298.53322795 3 11 0 TRUE 0 0 NA B coding 245 735 702 1436 10 PB.12120.1 chrX - 2922 20 novel_in_catalog ARHGAP4 novel NA NA NA NA combination_of_known_junctions FALSE canonical 10 15 1904 237.791925851 2 9 0 FALSE 0 0 NA C coding 847 2541 46 2586 15 PB.9318.4 chr15 + 3064 7 novel_not_in_catalog PSIP1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 17 21 1527 1048.37159443 2 1 0 FALSE 0 0 NA C coding 173 519 1037 1555 45 PB.8897.27 chr14 + 2657 1 novel_in_catalog SORL1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.489.1 chr1 - 1552 1 genic_intron novelGene_1623 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A coding 112 336 73 408 40 PB.5172.160 chr7 + 1495 9 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 186 2730.95898907 2 16 0 TRUE 0 0 NA B coding 87 261 80 340 20 PB.3069.5 chr4 - 1612 1 novel_in_catalog PNISR novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 95 PB.9318.1 chr15 + 3125 16 full-splice_match PSIP1 rna50613 3294 16 163 6 multi-exon TRUE canonical 0 0 21 835.070056941 16 0 0 FALSE 0 0 NA C coding 530 1590 150 1739 45 PB.9318.3 chr15 + 2625 1 novel_in_catalog PSIP1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.5374.1 chr8 - 1934 7 novel_in_catalog ARMC1 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical 0 0 689 398.179607715 46 4 0 FALSE 0 0 NA A coding 158 474 246 719 50 PB.1879.1 chr2 - 2969 17 full-splice_match COLQ rna10067 2563 17 19 -425 multi-exon FALSE canonical 9 13 929 40.7553677446 11 3 0 FALSE 0 0 NA C coding 461 1383 98 1480 0 PB.5172.166 chr7 + 1898 10 fusion LOC711872_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 185 3151.69922423 2 4 0 TRUE 0 0 NA B coding 375 1125 654 1778 35 PB.3245.1 chr4 - 1935 2 antisense novelGene_FYN_AS novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 53 NA 2 0 0 FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11178.1 chr19 - 5847 2 genic LOC106994871 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 2946 NA 6 26 0 TRUE 0 0 NA B coding 109 327 846 1172 75 PB.2499.1 chr3 + 2531 1 genic_intron novelGene_2289 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1101.3 chr1 + 3834 6 novel_not_in_catalog SELL novel NA NA NA NA any annotated donor/acceptor FALSE canonical 32 5914 126 1905.58967252 3 0 0 TRUE 0 0 NA B coding 259 777 85 861 80 PB.4728.1 chr7 + 2804 1 intergenic novelGene_1355 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.6019.6 chr9 + 1790 1 incomplete-splice_match WBP1L rna32791 4088 4 2287 12 mono-exon FALSE canonical NA NA NA NA 16 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 25 PB.6019.5 chr9 + 2764 4 full-splice_match WBP1L rna32792 5245 4 1067 1414 multi-exon FALSE canonical 26 135 225 210.556405744 4 2 0 FALSE 0 0 NA C coding 342 1026 199 1224 70 PB.4597.1 chr7 - 3912 9 full-splice_match CILP rna24830 4459 9 33 514 multi-exon FALSE canonical 10 49 42 59.8080262172 38 1 0 FALSE 0 0 NA A coding 1184 3552 150 3701 65 PB.6019.3 chr9 + 2584 4 full-splice_match WBP1L rna32791 4088 4 88 1416 multi-exon FALSE canonical 46 292 42 136.715032092 48 3 0 FALSE 0 0 NA C coding 149 447 595 1041 75 PB.6019.2 chr9 + 2660 5 novel_not_in_catalog WBP1L novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 19 240.960577689 3 4 0 TRUE 0 0 NA C coding 363 1089 32 1120 70 PB.8141.1 chr13 - 2115 6 full-splice_match CHMP3 rna44076 2165 6 187 -137 multi-exon FALSE canonical 48 2959 80 513.081864813 160 2 0 FALSE 0 0 NA C coding 222 666 36 701 55 PB.3182.1 chr4 - 1451 10 full-splice_match PEX7 rna17267 1477 10 23 3 multi-exon FALSE canonical 36 88 204 232.93132035 2 0 0 FALSE 0 0 NA A coding 323 969 75 1043 40 PB.10590.1 chr19 + 3326 4 full-splice_match ZNF555 rna57268 2200 4 90 -1216 multi-exon FALSE canonical 41 218 52 78.7654746701 2 0 0 FALSE 0 0 NA A coding 628 1884 50 1933 95 PB.11595.2 chr20 - 3263 7 novel_in_catalog DPEP2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 13 23 2694 69.0579466825 4 1 0 FALSE 0 0 NA C coding 184 552 2260 2811 50 PB.5881.1 chr9 + 5647 9 full-splice_match CCDC6 rna32137 6531 9 882 2 multi-exon FALSE canonical 38 305 1282 194.869186892 2 1 0 FALSE 0 0 NA A coding 474 1422 53 1474 25 PB.8472.2 chr14 + 4047 2 genic LOC700274 novel NA NA NA NA no_subcategory FALSE canonical 5 6 95 NA 2 5 1 FALSE 0 0 NA C coding 716 2148 156 2303 20 PB.31.1 chr1 + 3018 7 full-splice_match FAM213B rna171 950 7 57 -2125 multi-exon FALSE canonical 3 3 132 18.4932420089 14 4 0 FALSE 0 0 NA A coding 198 594 70 663 5 PB.3440.3 chr5 - 1305 1 genic ATP8A1 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.1956.5 chr2 + 1551 1 intergenic novelGene_2621 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.7142.1 chr11 - 3092 2 novel_in_catalog DUSP6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 713 1917 NA 3 2 0 FALSE 0 0 NA C coding 161 483 505 987 85 PB.10231.2 chr17 + 2977 1 genic_intron novelGene_549 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 3 NA FALSE 0 0 NA A coding 44 132 197 328 95 PB.10231.1 chr17 + 4381 23 full-splice_match COG3 rna55229 4532 23 149 2 multi-exon FALSE canonical 45 467 370 159.740414423 5 3 0 FALSE 0 0 NA A coding 732 2196 276 2471 10 PB.7142.2 chr11 - 2409 3 full-splice_match DUSP6 rna38794 2769 3 -8 368 multi-exon TRUE canonical 46 429 861 142 134 4 0 FALSE 0 0 NA C coding 368 1104 501 1604 20 PB.5900.1 chr9 - 2641 10 full-splice_match ATAD1 rna32218 2790 10 62 87 multi-exon FALSE canonical 41 1172 50 774.485635761 31 0 0 FALSE 0 0 NA A coding 361 1083 64 1146 65 PB.7142.4 chr11 - 3502 2 novel_in_catalog DUSP6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 429 861 NA 4 1 0 FALSE 0 0 NA C coding 270 810 501 1310 85 PB.2829.1 chr4 - 974 6 full-splice_match CLIC1 rna15505 1912 6 910 28 multi-exon FALSE canonical 46 5914 579 780.060895059 31 0 0 FALSE 0 0 NA A coding 241 723 16 738 50 PB.5629.1 chr8 - 1945 6 full-splice_match ZNF34 rna30400 1975 6 19 11 multi-exon FALSE canonical 28 51 49 57.3759531511 4 3 0 FALSE 0 0 NA A coding 546 1638 169 1806 40 PB.1412.1 chr2 - 3480 13 full-splice_match IRAK2 rna7551 2754 13 329 -1055 multi-exon FALSE canonical 25 44 1482 62.0564259364 4 1 0 FALSE 0 0 NA A coding 625 1875 10 1884 45 PB.11593.2 chr20 - 2804 6 novel_not_in_catalog PSMB10 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2768 404.69124033 2 4 0 TRUE 0 0 NA C coding 207 621 102 722 95 PB.8861.3 chr14 + 1796 1 incomplete-splice_match KMT2A rna48133 16578 36 13534 1249 mono-exon FALSE canonical NA NA NA NA 9 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 75 PB.5070.3 chr7 - 3022 1 genic_intron novelGene_2352 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.7741.8 chr12 - 1242 10 novel_in_catalog SP110 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 35 204 1016 90.9615303301 3 0 0 FALSE 0 0 NA B coding 374 1122 119 1240 45 PB.5185.5 chr8 + 5956 9 novel_not_in_catalog CTSB novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 140 3783.68339056 2 19 0 TRUE 0 0 NA C coding 197 591 3341 3931 35 PB.5185.1 chr8 + 3128 10 full-splice_match CTSB rna28225 3136 10 3 5 multi-exon FALSE canonical 41 1004 61 3406.1083365 694 3 0 FALSE 0 0 NA C coding 339 1017 87 1103 35 PB.10836.1 chr19 + 3177 23 incomplete-splice_match UPF1 rna58413 5393 24 554 1662 internal_fragment FALSE canonical 38 181 2783 210.762899961 2 10 0 FALSE 0 0 NA A coding 765 2295 824 3118 70 PB.7898.1 chr13 - 1667 13 full-splice_match EIF2B4 rna42881 1725 13 48 10 multi-exon FALSE canonical 21 50 92 234.946802489 5 0 0 FALSE 0 0 NA C coding 508 1524 107 1630 20 PB.7898.2 chr13 - 1639 13 full-splice_match EIF2B4 rna42879 1782 13 140 3 multi-exon FALSE canonical 33 137 57 219.116407419 25 0 0 FALSE 0 0 NA C coding 523 1569 27 1595 15 PB.5185.8 chr8 + 2582 5 incomplete-splice_match CTSB rna28232 2675 6 88 5 internal_fragment FALSE canonical 48 6786 72 2497.30975251 3 0 0 FALSE 0 0 NA C coding 100 300 258 557 35 PB.10377.1 chr17 + 2034 19 novel_not_in_catalog CDC16 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 5 5 135 246.225506396 2 1 0 FALSE 0 0 NA A coding 586 1758 133 1890 10 PB.5910.1 chr9 + 2483 1 intergenic novelGene_1612 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.257.8 chr1 + 2106 13 full-splice_match LCK rna1311 2105 13 -13 12 multi-exon FALSE canonical 16 461 132 631.57659868 4 2 0 FALSE 0 0 NA C coding 509 1527 138 1664 15 PB.2778.1 chr4 - 1106 1 genic_intron novelGene_577 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8691.2 chr14 - 6376 4 novel_in_catalog FAM168A novel NA NA NA NA combination_of_known_junctions FALSE canonical 29 134 321 67.8822509939 2 17 0 FALSE 0 0 NA B coding 129 387 1207 1593 80 PB.257.4 chr1 + 2484 11 novel_in_catalog LCK novel NA NA NA NA combination_of_known_junctions FALSE canonical 31 587 892 599.165252664 3 3 0 FALSE 0 0 NA C coding 249 747 1296 2042 15 PB.257.5 chr1 + 2599 10 novel_in_catalog LCK novel NA NA NA NA combination_of_known_junctions FALSE canonical 31 783 73 543.248561894 8 0 0 FALSE 0 0 NA C coding 249 747 1405 2151 10 PB.257.6 chr1 + 2260 12 full-splice_match LCK rna1308 2292 12 26 6 multi-exon TRUE canonical 29 587 662 621.212524021 2 1 0 FALSE 0 0 NA C coding 567 1701 112 1812 10 PB.257.7 chr1 + 1464 9 novel_in_catalog LCK novel NA NA NA NA combination_of_known_junctions FALSE canonical 29 587 454 482.864370191 2 3 0 FALSE 0 0 NA C coding 342 1026 78 1103 90 PB.2098.2 chr3 + 3473 19 incomplete-splice_match LTN1 rna11208 7745 31 66 4206 internal_fragment FALSE canonical 45 449 2819 223.210662828 2 4 0 FALSE 0 0 NA B coding 1133 3399 73 3471 65 PB.257.1 chr1 + 2089 13 full-splice_match LCK rna1309 2116 13 24 3 multi-exon FALSE canonical 29 587 488 596.414285543 117 0 0 FALSE 0 0 NA C coding 509 1527 112 1638 15 PB.3069.6 chr4 - 2848 3 novel_in_catalog PNISR novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 2090 76 1445.49991352 4 2 0 FALSE 0 0 NA C coding 101 303 1840 2142 95 PB.2098.1 chr3 + 1622 10 incomplete-splice_match LTN1 rna11208 7745 31 106 6017 internal_fragment FALSE canonical 45 684 1343 170.052932936 12 0 0 FALSE 0 0 NA B coding 530 1590 33 1622 70 PB.7917.3 chr13 + 2251 1 incomplete-splice_match LBH rna42975 2975 4 716 9 mono-exon FALSE canonical NA NA NA NA 6 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 5 PB.7917.2 chr13 + 2649 2 incomplete-splice_match LBH rna42975 2975 4 315 11 internal_fragment FALSE canonical 46 1355 42 NA 8 2 0 FALSE 0 0 NA C non_coding NA NA NA NA 5 PB.7917.1 chr13 + 2781 3 full-splice_match LBH rna42976 3022 3 238 3 multi-exon FALSE canonical 46 1096 68 129.499034745 164 3 0 FALSE 0 0 NA C coding 105 315 43 357 5 PB.5172.388 chr7 + 1577 9 fusion LOC708891_LOC711872 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 317 3642.73688317 2 13 0 TRUE 0 0 NA B coding 196 588 858 1445 15 PB.11671.1 chr20 + 1714 11 full-splice_match CENPN rna62914 3040 11 1303 23 multi-exon FALSE canonical 25 133 37 52.1919534028 4 0 0 FALSE 0 0 NA A coding 339 1017 48 1064 45 PB.9654.1 chr16 + 1268 7 full-splice_match NSRP1 rna52401 2493 7 39 1186 multi-exon FALSE canonical 38 266 46 64.1092816993 3 0 0 FALSE 0 0 NA C coding 414 1242 27 1268 55 PB.2812.10 chr4 - 1515 8 novel_not_in_catalog LOC100426197 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1104 9681.57549162 4 21 0 TRUE 0 0 NA B coding 242 726 501 1226 25 PB.9654.2 chr16 + 1517 1 incomplete-splice_match NSRP1 rna52401 2493 7 967 10 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA C coding 138 414 359 772 30 PB.7373.3 chr11 + 3226 18 full-splice_match SFSWAP rna39861 3239 18 9 4 multi-exon FALSE canonical 39 188 1455 198.017675979 3 3 0 FALSE 0 0 NA C coding 948 2844 134 2977 10 PB.7373.2 chr11 + 2997 17 full-splice_match SFSWAP rna39862 3008 17 7 4 multi-exon FALSE canonical 23 42 1855 220.099977283 2 1 0 FALSE 0 0 NA C coding 871 2613 136 2748 10 PB.7373.1 chr11 + 2972 13 novel_in_catalog SFSWAP novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 188 2049 195.407267009 2 0 0 FALSE 0 0 NA C coding 541 1623 1349 2971 60 PB.6487.1 chr10 - 673 4 full-splice_match CHCHD10 rna35340 700 4 21 6 multi-exon FALSE canonical 0 0 118 626.363313102 3 1 0 FALSE 0 0 NA A coding 142 426 78 503 15 PB.8592.2 chr14 + 1502 12 full-splice_match SAAL1 rna46593 1524 12 18 4 multi-exon FALSE canonical 33 169 1070 155.951915666 15 0 0 FALSE 0 0 NA A coding 472 1416 32 1447 35 PB.7544.1 chr12 - 2904 1 genic_intron novelGene_1183 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 16 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8701.1 chr14 + 3416 12 full-splice_match POLD3 rna47291 3526 12 104 6 multi-exon FALSE canonical 44 396 794 102.08329932 15 1 0 FALSE 0 0 NA A coding 466 1398 62 1459 35 PB.3355.2 chr5 - 3393 3 full-splice_match ZNF518B rna18280 7176 3 -8 3791 multi-exon FALSE canonical 29 93 109 134.499070629 3 1 0 FALSE 0 0 NA C coding 894 2682 711 3392 65 PB.3355.1 chr5 - 2978 2 full-splice_match ZNF518B rna18279 6793 2 24 3791 multi-exon FALSE canonical 37 181 84 NA 7 6 0 FALSE 0 0 NA C coding 894 2682 296 2977 65 PB.9737.1 chr16 + 3564 23 incomplete-splice_match SPAG9 rna52814 7956 33 910 3482 internal_fragment FALSE canonical 42 1684 2512 434.995402275 3 2 0 FALSE 0 0 NA A coding 969 2907 46 2952 50 PB.4746.2 chr7 + 3143 21 novel_not_in_catalog UNC45A novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1188 217.747560262 35 6 0 TRUE 0 0 NA B coding 430 1290 1466 2755 5 PB.2518.1 chr3 - 2911 18 full-splice_match POT1 rna13612 3080 18 168 1 multi-exon FALSE canonical 39 194 556 231.279052229 2 1 0 FALSE 0 0 NA C coding 503 1509 695 2203 20 PB.2237.1 chr3 - 1420 7 full-splice_match UBE2D4 rna12039 3814 7 -62 2456 multi-exon FALSE canonical 41 285 148 367.081734768 7 1 0 FALSE 0 0 NA A coding 147 441 125 565 45 PB.5247.1 chr8 + 3005 2 novel_in_catalog SLC25A37 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1824 160 NA 30 23 0 FALSE 0 0 NA B coding 107 321 95 415 95 PB.6714.1 chr11 + 3966 1 intergenic novelGene_83 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA A coding 105 315 884 1198 90 PB.5247.3 chr8 + 6667 3 novel_in_catalog SLC25A37 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 812 2499 506 21 30 0 FALSE 0 0 NA B coding 187 561 2457 3017 10 PB.3046.1 chr4 + 1756 8 full-splice_match SLC35A1 rna16728 1829 8 28 45 multi-exon FALSE canonical 40 577 201 162.895672134 13 0 0 FALSE 0 0 NA A coding 337 1011 8 1018 40 PB.3766.2 chr5 + 3457 12 full-splice_match GALNT7 rna20503 4571 12 266 848 multi-exon FALSE canonical 40 234 1201 138.032604844 15 0 0 FALSE 0 0 NA C coding 657 1971 54 2024 75 PB.5172.382 chr7 + 1487 8 novel_not_in_catalog LOC720839 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 324 2254.14285262 3 12 0 TRUE 0 0 NA B coding 245 735 708 1442 20 PB.11958.1 chrX + 1745 1 intergenic novelGene_1385 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.4746.1 chr7 + 3193 21 novel_not_in_catalog UNC45A novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1237 213.053983769 43 2 0 TRUE 0 0 NA B coding 430 1290 1515 2804 5 PB.11304.1 chr20 + 5692 21 fusion MGRN1_NUDT16L1 novel NA NA NA NA no_subcategory FALSE canonical 3 3 2575 130.70577646 2 8 0 TRUE 0 0 NA A coding 576 1728 146 1873 5 PB.11304.2 chr20 + 1278 3 full-splice_match NUDT16L1 rna61323 1419 3 140 1 multi-exon FALSE canonical 25 61 180 3 4 1 0 FALSE 0 0 NA A coding 211 633 28 660 10 PB.5172.380 chr7 + 1509 7 novel_not_in_catalog LOC720839 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 377 2919.63302489 2 16 0 TRUE 0 0 NA B coding 116 348 38 385 25 PB.5172.48 chr7 + 1573 8 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 380 3335.83752602 2 22 0 TRUE 0 0 NA B coding 196 588 851 1438 15 PB.1855.6 chr2 + 2639 1 genic_intron novelGene_2500 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1855.4 chr2 + 1653 1 genic_intron novelGene_2499 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.3606.1 chr5 - 2820 8 full-splice_match TRMT10A rna19502 1350 8 55 -1525 multi-exon FALSE canonical 25 86 94 58.3266662857 7 1 0 FALSE 0 0 NA A coding 339 1017 118 1134 45 PB.1855.2 chr2 + 6045 34 full-splice_match STAG1 rna9930 6137 34 89 3 multi-exon FALSE canonical 46 509 181 289.471933009 16 0 0 FALSE 0 0 NA C coding 1258 3774 266 4039 15 PB.6803.1 chr11 + 3022 1 incomplete-splice_match ETV6 rna37005 6171 8 3133 17 mono-exon FALSE canonical NA NA NA NA 5 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.4770.2 chr7 + 3816 1 incomplete-splice_match SYNM rna25719 7457 4 3619 23 mono-exon FALSE canonical NA NA NA NA 7 1 NA FALSE 0 0 NA B coding 268 804 432 1235 30 PB.9378.1 chr15 + 3266 21 full-splice_match PCSK5 rna50974 5835 21 102 2467 multi-exon FALSE canonical 19 79 1678 92.3146792228 4 1 0 FALSE 0 0 NA A coding 913 2739 471 3209 80 PB.1085.1 chr1 - 916 5 full-splice_match PRDX6 rna5976 1536 5 -38 658 multi-exon FALSE canonical 48 5695 192 629.97222161 48 0 0 FALSE 0 0 NA A coding 224 672 98 769 30 PB.2389.1 chr3 + 4577 53 novel_not_in_catalog COL1A2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 84 808.07177899 35 1 0 TRUE 0 0 NA C coding 270 810 1440 2249 70 PB.11462.3 chr20 + 2878 14 novel_in_catalog MVP novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 473 2188 421.332410337 4 0 0 FALSE 0 0 NA C coding 479 1437 94 1530 35 PB.1651.2 chr2 + 3823 3 novel_not_in_catalog CX3CR1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 268 0 3 2 0 TRUE 0 0 NA C coding 365 1095 847 1941 40 PB.11462.1 chr20 + 2779 15 full-splice_match MVP rna61931 2995 15 201 15 multi-exon FALSE canonical 39 396 1503 448.090392666 668 2 0 FALSE 0 0 NA C coding 893 2679 68 2746 35 PB.11462.6 chr20 + 1796 7 novel_in_catalog MVP novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 675 745 423.35800453 7 2 0 FALSE 0 0 NA C coding 348 1044 74 1117 90 PB.11462.7 chr20 + 1536 2 novel_not_in_catalog MVP novel NA NA NA NA not any annotated donor/acceptor FALSE non_canonical 0 0 1426 NA 2 5 0 TRUE 0 0 NA C non_coding NA NA NA NA 65 PB.11649.1 chr20 - 1123 1 intergenic novelGene_1196 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 8 0 NA FALSE 0 0 NA A coding 115 345 777 1121 75 PB.11462.5 chr20 + 2739 10 novel_in_catalog MVP novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 396 1519 458.463739024 3 1 0 FALSE 0 0 NA C coding 545 1635 84 1718 65 PB.11997.1 chrX - 2823 12 novel_in_catalog TRMT2B novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 23 48 329 111.067547015 3 2 0 FALSE 0 0 NA C coding 385 1155 439 1593 35 PB.9974.3 chr16 - 1667 1 genic_intron novelGene_1233 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.3369.1 chr5 + 1611 13 full-splice_match LAP3 rna18384 1942 13 39 292 multi-exon FALSE canonical 44 2365 956 457.757577764 71 2 0 FALSE 0 0 NA A coding 488 1464 62 1525 35 PB.4703.3 chr7 + 3909 8 novel_in_catalog TM6SF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 644 426 136.429468957 2 3 0 FALSE 0 0 NA C coding 152 456 3210 3665 30 PB.4703.2 chr7 + 1365 10 full-splice_match TM6SF1 rna25430 1461 10 93 3 multi-exon FALSE canonical 43 581 492 167.606682444 8 0 0 FALSE 0 0 NA C coding 370 1110 12 1121 30 PB.4703.1 chr7 + 6151 7 novel_in_catalog TM6SF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 681 144 108.554133961 3 4 0 FALSE 0 0 NA C coding 152 456 5474 5929 35 PB.1732.3 chr2 + 2785 1 genic_intron novelGene_2082 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 21 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.4703.6 chr7 + 6236 1 genic TM6SF1 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 15 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.2427.3 chr3 - 5375 2 genic TSC22D4 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 76 NA 2 7 1 TRUE 0 0 NA A coding 259 777 695 1471 85 PB.7257.8 chr11 - 3447 1 novel_in_catalog HVCN1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.5609.1 chr8 + 2894 2 novel_in_catalog EXOSC4 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 522 1503 NA 5 4 0 FALSE 0 0 NA C coding 147 441 1420 1860 90 PB.596.1 chr1 + 2773 4 incomplete-splice_match CSF1 rna3249 3773 8 643 357 internal_fragment FALSE canonical 16 44 887 14.5258390463 2 1 0 FALSE 0 0 NA A coding 265 795 189 983 70 PB.5172.513 chr7 + 1485 7 fusion LOC720839_LOC714734 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 388 2319.36823295 2 13 0 TRUE 0 0 NA B coding 245 735 706 1440 20 PB.2012.5 chr3 - 5798 33 novel_not_in_catalog TRPM2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 3092 38.0394532032 3 31 0 TRUE 0 0 NA B coding 981 2943 141 3083 5 PB.4682.1 chr7 + 3162 8 full-splice_match DNAJA4 rna25302 3238 8 71 5 multi-exon FALSE canonical 11 97 231 218.593229538 4 5 0 FALSE 0 0 NA A coding 426 1278 152 1429 25 PB.5223.2 chr8 + 2703 13 novel_in_catalog ATP6V1B2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 9 10 953 951.412633929 2 12 0 FALSE 0 0 NA C coding 317 951 27 977 40 PB.5223.1 chr8 + 2842 14 full-splice_match ATP6V1B2 rna28425 3038 14 185 11 multi-exon FALSE canonical 48 1416 158 572.340807561 208 1 0 FALSE 0 0 NA C coding 511 1533 23 1555 50 PB.2012.3 chr3 - 5546 33 novel_not_in_catalog TRPM2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 3158 37.0809924355 3 17 0 TRUE 0 0 NA B coding 981 2943 207 3149 10 PB.1391.1 chr2 - 6444 15 full-splice_match SLC6A6 rna7435 6373 15 -74 3 multi-exon FALSE canonical 36 217 220 216.607940759 9 10 0 FALSE 0 0 NA C coding 620 1860 274 2133 15 PB.7741.9 chr12 - 1903 1 novel_in_catalog SP110 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.3438.1 chr5 - 2720 1 incomplete-splice_match ATP8A1 rna18701 8264 37 5537 8 mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 35 PB.2178.1 chr3 + 1345 11 full-splice_match NCF1 rna11634 1483 11 76 62 multi-exon FALSE canonical 17 57 1071 312.206662325 46 0 0 FALSE 0 0 NA C coding 390 1170 21 1190 20 PB.6611.2 chr10 + 5536 6 novel_not_in_catalog MIEF1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 11 12 83 49.1629942131 4 0 0 FALSE 0 0 NA C coding 285 855 871 1725 10 PB.10774.5 chr19 - 2878 1 genic_intron novelGene_350 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 12 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.6344.6 chr10 - 6912 5 novel_in_catalog LOC715912 novel NA NA NA NA combination_of_known_junctions FALSE canonical 25 56 5772 115.073889306 6 11 0 FALSE 0 0 NA C coding 366 1098 40 1137 35 PB.6344.7 chr10 - 1652 1 genic_intron novelGene_768 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.6344.4 chr10 - 3044 8 novel_not_in_catalog LOC715912 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 936 130.384048104 2 12 0 TRUE 0 0 NA C coding 273 819 66 884 30 PB.6344.5 chr10 - 2793 5 novel_in_catalog LOC715912 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 4 4 115 149.969996999 4 5 0 FALSE 0 0 NA C coding 278 834 43 876 30 PB.6344.2 chr10 - 2689 6 full-splice_match LOC715912 rna34573 2853 6 10 154 multi-exon FALSE canonical 21 37 1117 121.25592769 57 3 0 FALSE 0 0 NA C coding 396 1188 40 1227 45 PB.11023.2 chr19 + 1964 6 novel_not_in_catalog PVRL2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1111 77.7303029712 7 12 0 FALSE 0 0 NA B coding 278 834 226 1059 30 PB.11023.1 chr19 + 2660 9 novel_not_in_catalog PVRL2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1091 66.8879660328 36 13 0 TRUE 0 0 NA B coding 278 834 206 1039 20 PB.10913.1 chr19 + 3261 3 full-splice_match ZNF146 rna58887 3398 3 140 -3 multi-exon FALSE canonical 43 604 92 29 17 4 0 FALSE 0 0 NA A coding 292 876 932 1807 40 PB.6702.1 chr10 - 1461 11 full-splice_match CHKB rna36451 1614 11 139 14 multi-exon FALSE canonical 13 16 282 230.516810667 23 0 0 FALSE 0 0 NA A coding 395 1185 59 1243 0 PB.874.7 chr1 + 5638 23 novel_in_catalog TMEM63A novel NA NA NA NA combination_of_known_junctions FALSE canonical 10 17 19 108.425089347 3 2 0 FALSE 0 0 NA C coding 816 2448 224 2671 30 PB.2178.2 chr3 + 1451 4 novel_in_catalog NCF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 30 584 92 142.151327817 46 2 0 FALSE 0 0 NA C coding 132 396 21 416 95 PB.1641.1 chr2 + 2804 1 genic_intron novelGene_1818 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.6344.8 chr10 - 2007 3 novel_in_catalog LOC715912 novel NA NA NA NA combination_of_known_junctions FALSE canonical 27 165 113 13.4907375632 2 1 0 FALSE 0 0 NA C coding 256 768 41 808 25 PB.6344.9 chr10 - 1245 4 novel_in_catalog LOC715912 novel NA NA NA NA combination_of_known_junctions FALSE canonical 27 165 113 93.7496666661 8 0 0 FALSE 0 0 NA C coding 366 1098 41 1138 30 PB.8900.4 chr14 + 2686 1 genic_intron novelGene_1998 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.3593.1 chr5 + 3749 1 genic_intron novelGene_1691 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11511.4 chr20 + 3443 17 novel_in_catalog CYLD novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 782 2437 352.146276425 4 0 0 FALSE 0 0 NA C coding 953 2859 206 3064 40 PB.3658.1 chr5 - 1392 5 full-splice_match MAD2L1 rna19886 699 5 -18 -675 multi-exon FALSE canonical 41 651 166 256.169865519 10 2 0 FALSE 0 0 NA A coding 205 615 94 708 40 PB.2638.1 chr3 + 1414 3 full-splice_match GIMAP2 rna14224 1131 3 27 -310 multi-exon FALSE canonical 35 337 54 52 23 0 0 FALSE 0 0 NA A coding 340 1020 63 1082 30 PB.11511.1 chr20 + 3468 18 full-splice_match CYLD rna62147 8579 18 48 5063 multi-exon FALSE canonical 36 174 31 440.441823627 2 2 0 FALSE 0 0 NA C coding 953 2859 235 3093 45 PB.11511.3 chr20 + 2123 11 incomplete-splice_match CYLD rna62149 8601 18 42 6436 3prime_fragment FALSE canonical 32 158 59 479.919784964 2 2 0 FALSE 0 0 NA C coding 620 1860 263 2122 55 PB.11511.2 chr20 + 3478 18 full-splice_match CYLD rna62149 8601 18 58 5065 multi-exon FALSE canonical 32 158 43 442.827280099 17 2 0 FALSE 0 0 NA C coding 953 2859 247 3105 45 PB.2912.5 chr4 + 5911 1 genic_intron novelGene_840 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 16 NA FALSE 0 0 NA A coding 114 342 3940 4281 85 PB.1202.1 chr1 - 3224 1 genic_intron novelGene_2654 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA B non_coding NA NA NA NA 80 PB.4400.1 chr7 - 1663 1 full-splice_match NSMCE3 rna23849 1602 1 -23 -38 mono-exon FALSE canonical NA NA NA NA 12 0 NA FALSE 0 0 NA A coding 299 897 118 1014 30 PB.3089.8 chr4 + 2711 13 novel_in_catalog EZR novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 783 1481 544.855944264 82 4 0 FALSE 0 0 NA C coding 586 1758 138 1895 45 PB.2912.1 chr4 + 2994 5 novel_not_in_catalog ZFAND3 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 455 284.227021938 2 2 0 TRUE 0 0 NA B coding 111 333 1575 1907 45 PB.6063.1 chr9 + 3910 1 genic SLC18A2 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.1391.8 chr2 - 2933 1 genic_intron novelGene_1051 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A coding 207 621 2062 2682 90 PB.3089.3 chr4 + 2859 15 novel_not_in_catalog EZR novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 2507 703.355528876 5 0 0 TRUE 0 0 NA C coding 586 1758 126 1883 25 PB.3089.2 chr4 + 2921 13 novel_in_catalog EZR novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 0 0 1217 717.961698143 3 2 0 FALSE 0 0 NA C coding 386 1158 128 1285 25 PB.3089.1 chr4 + 2848 14 full-splice_match EZR rna16941 3138 14 80 210 multi-exon FALSE canonical 38 763 23 582.320358566 881 2 0 FALSE 0 0 NA C coding 586 1758 97 1854 30 PB.3089.7 chr4 + 2940 14 novel_not_in_catalog EZR novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 1136 721.925896474 2 3 0 TRUE 0 0 NA C coding 555 1665 99 1763 50 PB.2912.8 chr4 + 2685 3 novel_in_catalog ZFAND3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 38 118 129 320 3 8 0 FALSE 0 0 NA B coding 46 138 312 449 20 PB.3089.5 chr4 + 3881 14 novel_not_in_catalog EZR novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 3318 721.925896474 2 10 0 TRUE 0 0 NA C coding 408 1224 121 1344 25 PB.3089.4 chr4 + 2732 11 novel_in_catalog EZR novel NA NA NA NA combination_of_known_junctions FALSE canonical 38 763 47 556.781824416 2 2 0 FALSE 0 0 NA C coding 397 1191 154 1344 80 PB.8900.5 chr14 + 2750 1 genic_intron novelGene_1999 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.9956.22 chr16 - 3631 12 novel_not_in_catalog DDX5 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2862 7316.16819107 9 12 0 TRUE 0 0 NA C coding 406 1218 171 1388 40 PB.9956.20 chr16 - 3149 14 novel_not_in_catalog DDX5 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 27 82 2136 8093.18997676 5 0 0 TRUE 0 0 NA C coding 406 1218 171 1388 40 PB.6495.2 chr10 + 6215 17 novel_not_in_catalog SPECC1L novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 104 466.56082133 2 19 0 FALSE 0 0 NA C coding 1117 3351 246 3596 35 PB.6495.1 chr10 + 6125 16 full-splice_match SPECC1L rna35416 6662 16 49 488 multi-exon FALSE canonical 35 432 117 402.97642611 17 2 0 FALSE 0 0 NA C coding 1117 3351 155 3505 35 PB.1968.3 chr2 + 2736 1 novel_in_catalog LOC106997194 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1968.2 chr2 - 3301 24 novel_not_in_catalog ACAP2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 350 697.105443961 2 3 0 TRUE 0 0 NA C coding 734 2202 425 2626 75 PB.1968.1 chr2 + 5697 1 antisense novelGene_ACAP2_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 11 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11699.1 chr20 + 3245 14 full-splice_match USP10 rna62975 3373 14 124 4 multi-exon FALSE canonical 43 386 2221 174.390366706 107 0 0 FALSE 0 0 NA A coding 798 2394 13 2406 15 PB.8344.1 chr14 - 3271 17 novel_in_catalog BBS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 21 53 1491 109.644881321 5 2 0 FALSE 0 0 NA A coding 593 1779 19 1797 25 PB.11759.1 chrX - 1375 4 full-splice_match SLC25A6 rna63203 1573 4 95 103 multi-exon FALSE canonical 48 1349 248 473.120492053 711 0 0 FALSE 0 0 NA A coding 298 894 138 1031 15 PB.8897.2 chr14 + 1585 9 novel_in_catalog SORL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 1138 253 583.337809507 10 0 0 FALSE 0 0 NA C coding 368 1104 281 1384 90 PB.7280.1 chr11 + 2767 28 full-splice_match TPCN1 rna39432 5172 28 40 2365 multi-exon FALSE canonical 23 76 140 187.128298234 4 0 0 FALSE 0 0 NA C coding 816 2448 266 2713 25 PB.7280.2 chr11 + 5667 27 novel_in_catalog TPCN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 23 76 155 186.839503318 2 6 0 FALSE 0 0 NA C coding 606 1818 281 2098 20 PB.4022.4 chr6 - 2733 10 novel_in_catalog MEF2C novel NA NA NA NA combination_of_known_junctions FALSE canonical 45 931 232 618.724494424 25 4 0 FALSE 0 0 NA C coding 465 1395 372 1766 55 PB.783.2 chr1 - 4566 22 full-splice_match SMG5 rna4297 4511 22 -58 3 multi-exon FALSE canonical 42 300 3117 321.596019876 11 2 0 FALSE 0 0 NA C coding 1016 3048 151 3198 10 PB.2293.1 chr3 - 3116 2 intergenic novelGene_1561 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 3047 NA 2 5 1 FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.9242.1 chr15 - 5758 5 novel_in_catalog ZNF484 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 419 145 17.4928556845 2 1 0 FALSE 0 0 NA A coding 851 2553 176 2728 70 PB.863.2 chr1 + 1855 5 full-splice_match ARF1 rna4701 1967 5 108 4 multi-exon FALSE canonical 24 66 82 2127.58102078 2 1 0 FALSE 0 0 NA C coding 181 543 120 662 10 PB.863.1 chr1 + 1724 5 full-splice_match ARF1 rna4702 725 5 3 -1002 multi-exon FALSE canonical 44 3181 38 909.798878874 423 0 0 FALSE 0 0 NA C coding 181 543 76 618 30 PB.7301.1 chr11 - 3977 9 full-splice_match VSIG10 rna39493 4989 9 118 894 multi-exon FALSE canonical 14 44 301 120.374415886 2 1 0 FALSE 0 0 NA C coding 536 1608 223 1830 80 PB.7301.2 chr11 - 3764 10 novel_not_in_catalog VSIG10 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 3432 138.459380325 2 4 0 TRUE 0 0 NA C coding 536 1608 218 1825 65 PB.7965.1 chr13 - 1522 1 full-splice_match OXER1 rna43242 3914 1 2365 27 mono-exon FALSE canonical NA NA NA NA 25 0 NA FALSE 0 0 NA C coding 253 759 360 1118 40 PB.7965.2 chr13 - 1500 2 novel_not_in_catalog OXER1 novel NA NA NA NA not any annotated donor/acceptor FALSE canonical 3 9 525 NA 4 0 0 FALSE 0 0 NA C coding 130 390 689 1078 40 PB.4952.1 chr7 + 3932 2 genic_intron novelGene_2069 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 42 NA 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.12120.9 chrX - 3002 21 full-splice_match ARHGAP4 rna65582 3069 21 63 4 multi-exon FALSE canonical 10 15 1986 221.822000712 2 1 0 FALSE 0 0 NA C coding 868 2604 65 2668 15 PB.187.1 chr1 + 1632 1 genic_intron novelGene_536 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.8808.2 chr14 + 2787 1 novel_in_catalog ACAT1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 9 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.8808.1 chr14 + 1503 12 full-splice_match ACAT1 rna47831 1377 12 -55 -71 multi-exon FALSE canonical 41 980 135 1432.89357595 24 0 0 FALSE 0 0 NA C coding 427 1281 64 1344 30 PB.7234.1 chr11 + 3687 13 full-splice_match USP30 rna39231 3729 13 37 5 multi-exon FALSE canonical 37 115 129 91.7115041857 12 1 0 FALSE 0 0 NA A coding 508 1524 74 1597 40 PB.27.1 chr1 + 2972 7 full-splice_match RER1 rna148 2761 7 -10 -201 multi-exon FALSE canonical 47 625 96 1079.55731668 40 3 0 FALSE 0 0 NA A coding 196 588 104 691 30 PB.7067.1 chr11 + 2993 1 incomplete-splice_match SRGAP1 rna38459 9296 22 6295 9 mono-exon FALSE canonical NA NA NA NA 17 5 NA FALSE 0 0 NA B coding 152 456 373 828 5 PB.2406.1 chr3 + 1730 8 full-splice_match CPSF4 rna13007 1098 8 1 -633 multi-exon FALSE canonical 40 146 680 179.131236807 2 2 0 FALSE 0 0 NA A coding 244 732 111 842 25 PB.6918.2 chr11 - 1538 2 novel_in_catalog CCNT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 823 231 NA 2 10 0 FALSE 0 0 NA C coding 113 339 71 409 70 PB.1238.1 chr2 - 3269 2 novel_in_catalog FILIP1L novel NA NA NA NA combination_of_known_junctions FALSE canonical 23 48 127 NA 33 0 0 FALSE 0 0 NA A coding 893 2679 243 2921 20 PB.5875.7 chr9 - 1787 5 novel_in_catalog ARID5B novel NA NA NA NA combination_of_known_junctions FALSE canonical 37 356 749 197.192799057 2 0 0 FALSE 0 0 NA B coding 318 954 17 970 90 PB.3771.1 chr5 + 2721 1 genic_intron novelGene_2550 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.5875.1 chr9 - 6240 2 incomplete-splice_match ARID5B rna32097 7932 10 1686 6 5prime_fragment FALSE canonical 40 629 172 NA 4 5 0 FALSE 0 0 NA B coding 696 2088 248 2335 5 PB.653.2 chr1 - 2909 12 novel_in_catalog GDAP2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 6 7 545 293.446758374 2 7 0 FALSE 0 0 NA C coding 416 1248 230 1477 75 PB.6883.1 chr11 - 2939 20 full-splice_match CPNE8 rna37464 3491 20 40 512 multi-exon FALSE canonical 27 116 155 114.258478898 10 1 0 FALSE 0 0 NA A coding 564 1692 58 1749 40 PB.4767.1 chr7 - 2739 4 intergenic novelGene_1516 novel NA NA NA NA no_subcategory FALSE canonical 0 0 1799 0 2 2 0 FALSE 0 0 NA B non_coding NA NA NA NA 45 PB.8695.3 chr14 - 2087 8 novel_in_catalog UCP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 100 280 315.068246575 6 4 0 FALSE 0 0 NA C coding 309 927 841 1767 10 PB.7471.1 chr12 - 2653 1 genic_intron novelGene_687 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1182.1 chr1 - 1598 10 full-splice_match FH rna6403 1803 10 24 181 multi-exon FALSE canonical 45 1067 166 795.38606978 30 0 0 FALSE 0 0 NA A coding 510 1530 35 1564 60 PB.8695.2 chr14 - 1626 8 full-splice_match UCP2 rna47261 2085 8 453 6 multi-exon FALSE canonical 36 208 714 265.932322218 498 1 0 FALSE 0 0 NA C coding 309 927 378 1304 0 PB.6489.1 chr10 - 2655 5 novel_not_in_catalog DERL3 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 10 22 185 120.60265337 2 1 0 FALSE 0 0 NA A coding 138 414 27 440 50 PB.2439.1 chr3 + 3791 12 novel_not_in_catalog LOC719516 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 845 3.31662479036 5 0 0 TRUE 0 0 NA B coding 1064 3192 302 3493 35 PB.10411.1 chr18 + 2163 20 full-splice_match C18H18orf8 rna56230 2206 20 44 -1 multi-exon FALSE non_canonical 0 0 1112 189.686583606 7 1 0 FALSE 0 0 NA A coding 657 1971 107 2077 40 PB.3956.1 chr6 + 2881 2 intergenic novelGene_1305 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 23 NA 5 3 0 FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.1218.1 chr2 - 2934 16 full-splice_match GBE1 rna6625 2787 16 83 -230 multi-exon FALSE canonical 43 688 449 262.512856828 39 3 0 FALSE 0 0 NA A coding 702 2106 137 2242 50 PB.709.1 chr1 + 1404 2 full-splice_match MLLT11 rna3804 1518 2 109 5 multi-exon FALSE canonical 44 982 143 NA 18 1 0 FALSE 0 0 NA A coding 126 378 340 717 20 PB.7818.1 chr13 - 2926 5 incomplete-splice_match TMEM18 rna42368 4827 6 53 1848 internal_fragment FALSE canonical 39 181 127 202.605528059 2 3 0 FALSE 0 0 NA A coding 140 420 71 490 25 PB.241.3 chr1 - 1436 1 incomplete-splice_match LAPTM5 rna1211 2250 8 815 0 mono-exon FALSE canonical NA NA NA NA 8 14 NA FALSE 0 0 NA C non_coding NA NA NA NA 5 PB.241.5 chr1 - 1212 8 full-splice_match LAPTM5 rna1211 2250 8 65 973 multi-exon FALSE canonical 39 725 116 371.251936022 241 1 0 FALSE 0 0 NA C coding 262 786 30 815 30 PB.5172.78 chr7 + 1568 8 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 378 3335.83752602 2 12 0 TRUE 0 0 NA B coding 475 1425 17 1441 15 PB.241.6 chr1 - 2924 7 novel_in_catalog LAPTM5 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 725 116 396.943320891 4 14 0 FALSE 0 0 NA C coding 191 573 982 1554 5 PB.241.9 chr1 - 2124 8 novel_not_in_catalog LAPTM5 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 149 736.371509498 4 18 1 TRUE 0 0 NA C coding 191 573 182 754 5 PB.7846.1 chr13 + 1716 7 full-splice_match PQLC3 rna42537 1819 7 95 8 multi-exon FALSE canonical 41 225 223 129.996153789 31 1 0 FALSE 0 0 NA C coding 202 606 81 686 30 PB.7846.2 chr13 + 3327 1 novel_in_catalog PQLC3 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 6 1 NA FALSE 0 0 NA C coding 160 480 2323 2802 90 PB.7846.3 chr13 + 1589 6 full-splice_match PQLC3 rna42538 1698 6 105 4 multi-exon FALSE canonical 20 36 424 211.619942349 2 2 0 FALSE 0 0 NA C coding 124 372 71 442 25 PB.10651.1 chr19 - 2614 23 full-splice_match DENND1C rna57514 2615 23 34 -33 multi-exon FALSE canonical 7 10 770 21.5870331449 154 1 0 FALSE 0 0 NA C coding 801 2403 93 2495 70 PB.8869.1 chr14 + 924 5 full-splice_match TRAPPC4 rna48201 981 5 49 8 multi-exon FALSE canonical 48 963 187 361.135708564 4 0 0 FALSE 0 0 NA A coding 219 657 13 669 15 PB.2105.1 chr3 + 1663 1 genic_intron novelGene_487 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.4044.4 chr6 - 3197 19 full-splice_match ERAP1 rna21988 4979 19 178 1604 multi-exon FALSE canonical 34 337 84 235.597113734 31 3 0 FALSE 0 0 NA C coding 929 2787 138 2924 20 PB.4044.1 chr6 - 1706 1 incomplete-splice_match ERAP1 rna21988 4979 19 3271 3 mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.5918.3 chr9 - 2783 2 novel_in_catalog PANK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 149 335 NA 5 2 0 FALSE 0 0 NA B non_coding NA NA NA NA 70 PB.2259.1 chr3 - 2710 3 novel_not_in_catalog GPR141 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 21 77 221 91.4986338696 7 1 0 FALSE 0 0 NA A coding 305 915 236 1150 55 PB.2259.2 chr3 - 1613 1 genic_intron novelGene_1439 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.5172.74 chr7 + 1587 9 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 263 3392.99705275 3 9 0 TRUE 0 0 NA B coding 196 588 872 1459 15 PB.4167.1 chr6 + 2995 19 full-splice_match KIF20A rna22598 3474 19 422 57 multi-exon FALSE canonical 9 65 60 59.3211597999 22 0 0 FALSE 0 0 NA A coding 890 2670 82 2751 30 PB.4521.1 chr7 - 1924 12 full-splice_match LEO1 rna24504 2538 12 393 221 multi-exon FALSE canonical 39 414 71 147.203940165 6 0 0 FALSE 0 0 NA C coding 637 1911 14 1924 60 PB.1969.10 chr2 - 2975 19 novel_in_catalog ACAP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 827 239 556.991023267 2 7 0 FALSE 0 0 NA C coding 672 2016 187 2202 65 PB.6043.1 chr9 + 1481 14 incomplete-splice_match SMC3 rna32911 5542 29 22 4039 3prime_fragment FALSE canonical 47 536 128 397.448109821 7 2 0 FALSE 0 0 NA C coding 456 1368 114 1481 70 PB.4521.2 chr7 - 1605 9 incomplete-splice_match LEO1 rna24504 2538 12 396 537 internal_fragment FALSE canonical 39 414 68 151.812384212 2 0 0 FALSE 0 0 NA C coding 531 1593 11 1603 45 PB.5289.1 chr8 - 1595 1 intergenic novelGene_827 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5688.1 chr9 - 1795 1 antisense novelGene_HSPA14_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.3638.1 chr5 + 1161 8 full-splice_match CCDC109B rna19687 1297 8 134 2 multi-exon FALSE canonical 30 115 115 305.129480713 8 0 0 FALSE 0 0 NA C coding 336 1008 17 1024 25 PB.3638.3 chr5 + 1736 7 novel_in_catalog CCDC109B novel NA NA NA NA combination_of_known_junctions FALSE canonical 30 115 90 325.249135279 2 2 0 FALSE 0 0 NA C coding 192 576 256 831 30 PB.3638.2 chr5 + 3175 6 novel_in_catalog CCDC109B novel NA NA NA NA combination_of_known_junctions FALSE canonical 30 115 146 356.265350546 3 3 0 FALSE 0 0 NA C coding 210 630 48 677 40 PB.10419.2 chr18 - 3268 1 genic CHST9 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA B non_coding NA NA NA NA 95 PB.10419.1 chr18 - 3269 2 genic CHST9 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 3244 NA 3 1 0 TRUE 0 0 NA B non_coding NA NA NA NA 70 PB.11374.1 chr20 + 1521 1 genic_intron novelGene_405 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.6007.2 chr9 + 2947 23 full-splice_match NFKB2 rna32761 3046 23 85 14 multi-exon FALSE canonical 3 3 1446 120.834597695 10 8 0 FALSE 0 0 NA C coding 911 2733 120 2852 25 PB.9156.1 chr15 + 2766 3 novel_in_catalog CDC26 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 223 2247 781 2 3 0 FALSE 0 0 NA A coding 109 327 2189 2515 35 PB.8246.1 chr14 - 650 2 full-splice_match IFITM1 rna44594 760 2 105 5 multi-exon FALSE canonical 46 3645 304 NA 17 0 0 FALSE 0 0 NA C coding 125 375 119 493 20 PB.8852.4 chr14 - 2800 9 novel_in_catalog JAML novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 1101 863 184.431559122 4 0 0 FALSE 0 0 NA C coding 344 1032 92 1123 30 PB.11859.2 chrX - 1480 9 full-splice_match CFP rna63793 1611 9 127 4 multi-exon FALSE canonical 30 238 778 505.89623442 261 0 0 FALSE 0 0 NA A coding 469 1407 13 1419 15 PB.5513.5 chr8 - 2058 14 incomplete-splice_match TAF2 rna29907 4870 26 -4 2816 internal_fragment FALSE canonical 46 487 838 227.048452979 6 0 0 FALSE 0 0 NA C coding 583 1749 309 2057 45 PB.3766.1 chr5 + 3853 11 novel_in_catalog GALNT7 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 1 3 196 193.297697865 2 13 0 FALSE 0 0 NA C coding 434 1302 279 1580 15 PB.9575.3 chr16 + 1852 15 incomplete-splice_match NCOR1 rna52045 9068 46 26 7190 3prime_fragment FALSE canonical 34 165 179 456.224725327 32 0 0 FALSE 0 0 NA B coding 534 1602 250 1851 75 PB.9575.2 chr16 + 1853 16 incomplete-splice_match NCOR1 rna52041 9626 48 13 7760 3prime_fragment FALSE canonical 34 165 192 516.220882956 4 1 0 FALSE 0 0 NA B coding 530 1590 263 1852 80 PB.9575.5 chr16 + 2850 1 novel_in_catalog NCOR1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA B non_coding NA NA NA NA 80 PB.9575.4 chr16 + 1839 15 novel_not_in_catalog NCOR1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1088 562.974244526 6 6 1 TRUE 0 0 NA B coding 531 1593 246 1838 65 PB.5513.3 chr8 - 3755 27 novel_not_in_catalog TAF2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 3018 366.127027137 2 7 0 FALSE 0 0 NA C coding 1149 3447 309 3755 70 PB.9575.6 chr16 + 6685 32 incomplete-splice_match NCOR1 rna52044 9425 46 1852 888 internal_fragment FALSE canonical 40 619 3698 254.954897972 2 24 0 FALSE 0 0 NA B coding 1905 5715 83 5797 20 PB.8145.3 chr13 - 2730 5 novel_in_catalog CD8A novel NA NA NA NA combination_of_known_junctions FALSE canonical 18 63 102 522.150361486 6 10 0 FALSE 0 0 NA B coding 171 513 54 566 40 PB.11266.1 chr20 + 3640 21 full-splice_match TRAF7 rna61109 2366 21 1 -1275 multi-exon FALSE canonical 34 115 63 168.460677904 26 2 0 FALSE 0 0 NA A coding 670 2010 102 2111 20 PB.394.4 chr1 - 4331 25 full-splice_match EPS15 rna2119 4749 25 415 3 multi-exon FALSE canonical 40 318 807 464.242393583 4 2 0 FALSE 0 0 NA C coding 934 2802 46 2847 20 PB.394.5 chr1 - 2989 1 novel_in_catalog EPS15 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.9320.3 chr15 + 3210 1 genic_intron novelGene_1370 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.10976.1 chr19 - 2179 7 fusion LOC106992315_TGFB1 novel NA NA NA NA no_subcategory FALSE canonical 22 58 1894 68 17 0 0 TRUE 0 0 NA A coding 390 1170 881 2050 30 PB.394.1 chr1 - 2862 25 full-splice_match EPS15 rna2117 4638 25 444 1332 multi-exon FALSE canonical 40 626 49 387.064594093 18 0 0 FALSE 0 0 NA C coding 897 2691 17 2707 20 PB.10608.11 chr19 - 3059 15 novel_not_in_catalog EEF2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1427 6583.50005696 2 3 0 TRUE 0 0 NA C coding 489 1467 84 1550 5 PB.8058.3 chr13 + 2957 12 full-splice_match MEIS1 rna43657 4523 12 465 1101 multi-exon FALSE canonical 26 101 1450 207.773915591 2 4 0 FALSE 0 0 NA C coding 452 1356 376 1731 15 PB.2410.1 chr3 + 3662 5 incomplete-splice_match ZSCAN25 rna13050 4498 8 829 7 internal_fragment FALSE canonical 44 152 36 40.7430975749 3 2 0 FALSE 0 0 NA A coding 381 1143 142 1284 25 PB.7119.3 chr11 - 1345 14 full-splice_match NAP1L1 rna38631 1678 14 329 4 multi-exon FALSE canonical 39 233 1253 1926.79474776 3 0 0 FALSE 0 0 NA C coding 383 1149 165 1313 25 PB.1222.1 chr2 + 1217 6 full-splice_match CHMP2B rna6646 1599 6 15 367 multi-exon FALSE canonical 47 517 223 417.887544682 12 1 0 FALSE 0 0 NA A coding 213 639 190 828 25 PB.7663.5 chr12 - 3438 1 genic_intron novelGene_1687 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.8150.2 chr13 - 939 5 fusion LOC701504_LOC100424911_LOC106992424 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 372 1533.51067815 101 11 0 TRUE 0 0 NA A coding 235 705 25 729 0 PB.7663.6 chr12 - 5509 1 genic_intron novelGene_1688 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.2968.1 chr4 + 2804 16 full-splice_match CDC5L rna16159 2715 16 -81 -8 multi-exon FALSE canonical 48 1353 1498 408.245024464 62 1 0 FALSE 0 0 NA A coding 802 2406 95 2500 80 PB.9937.3 chr16 + 2465 7 full-splice_match DCAF7 rna53915 6398 7 44 3889 multi-exon FALSE canonical 42 351 739 92.8601098427 4 1 0 FALSE 0 0 NA C coding 342 1026 212 1237 65 PB.9937.2 chr16 + 1377 8 full-splice_match DCAF7 rna53914 1426 8 28 21 multi-exon FALSE canonical 18 54 1321 162.083311911 2 0 0 FALSE 0 0 NA C coding 342 1026 228 1253 40 PB.9937.1 chr16 + 1425 1 novel_in_catalog DCAF7 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 5 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.5239.1 chr8 - 1544 9 full-splice_match BIN3 rna28523 1582 9 23 15 multi-exon FALSE canonical 43 178 550 182.994535438 39 0 0 FALSE 0 0 NA A coding 253 759 71 829 35 PB.11927.1 chrX + 1369 6 full-splice_match IGBP1 rna64224 1067 6 -13 -289 multi-exon FALSE canonical 47 1480 691 526.106453106 25 1 0 FALSE 0 0 NA A coding 339 1017 14 1030 40 PB.9937.5 chr16 + 2869 1 incomplete-splice_match DCAF7 rna53915 6398 7 3525 5 mono-exon FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.8308.1 chr14 + 3476 11 novel_not_in_catalog KMT5B novel NA NA NA NA any annotated donor/acceptor FALSE canonical 32 157 164 437.897248222 25 1 0 TRUE 0 0 NA B coding 885 2655 241 2895 85 PB.2314.1 chr3 + 433 3 full-splice_match TOMM7 rna12414 418 3 -36 21 multi-exon FALSE canonical 48 10209 171 3118.49995992 3 1 0 FALSE 0 0 NA A non_coding NA NA NA NA 15 PB.6123.2 chr9 + 1305 11 full-splice_match MTG1 rna33414 1366 11 59 2 multi-exon FALSE canonical 46 435 53 246.50557803 27 1 0 FALSE 0 0 NA A coding 300 900 44 943 10 PB.6654.5 chr10 - 1486 1 incomplete-splice_match A4GALT rna36197 2113 3 624 4 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA C coding 240 720 18 737 10 PB.11989.1 chrX + 2883 1 genic_intron novelGene_1712 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.8797.4 chr14 - 1985 9 novel_in_catalog CASP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 536 1032 79.2212092814 4 0 0 FALSE 0 0 NA C coding 404 1212 27 1238 50 PB.6601.1 chr10 + 1508 8 full-splice_match LOC721047 rna36007 1630 8 110 12 multi-exon FALSE canonical 9 43 773 100.119928086 8 5 0 FALSE 0 0 NA A coding 382 1146 51 1196 20 PB.5151.2 chr7 + 1486 1 incomplete-splice_match TNFAIP2 rna27936 4281 12 2793 3 mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 15 PB.8204.1 chr13 + 3466 1 genic_intron novelGene_1781 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.4535.2 chr7 - 3074 9 novel_not_in_catalog CCPG1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 195 1376.85148073 8 8 0 TRUE 0 0 NA B coding 690 2070 338 2407 45 PB.4535.1 chr7 + 1895 12 full-splice_match PIGB rna24552 1874 12 -28 7 multi-exon FALSE non_canonical 0 0 321 110.027269347 5 1 0 FALSE 0 0 NA A coding 551 1653 50 1702 15 PB.10089.2 chr16 - 4281 16 full-splice_match SLC38A10 rna54562 4334 16 41 12 multi-exon FALSE canonical 40 147 2438 209.303607231 67 6 0 FALSE 0 0 NA C coding 1123 3369 374 3742 10 PB.1811.1 chr2 + 1638 1 novel_in_catalog LOC704999 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA A coding 112 336 248 583 90 PB.8427.2 chr14 + 1504 11 full-splice_match BSCL2 rna45537 1522 11 18 0 multi-exon FALSE canonical 34 108 97 831.952522684 9 0 0 FALSE 0 0 NA C coding 404 1212 203 1414 25 PB.8427.3 chr14 + 1434 11 novel_in_catalog BSCL2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 15 24 33 852.783090827 6 1 0 FALSE 0 0 NA C coding 404 1212 139 1350 15 PB.8427.1 chr14 + 1993 12 full-splice_match BSCL2 rna45529 1943 12 4 -54 multi-exon FALSE canonical 46 298 370 797.546236904 6 0 0 FALSE 0 0 NA C coding 468 1404 500 1903 25 PB.11410.4 chr20 - 1487 1 antisense novelGene_PRKCB_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8427.4 chr14 + 1700 11 novel_in_catalog BSCL2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 29 299 296 785.542487712 2 1 0 FALSE 0 0 NA C coding 404 1212 402 1613 20 PB.6446.16 chr10 - 6515 1 genic_intron novelGene_1223 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 6 NA FALSE 0 0 NA A coding 133 399 2701 3099 90 PB.8817.1 chr14 + 5644 15 fusion LOC711453_LOC100430530 novel NA NA NA NA no_subcategory TRUE canonical 29 209 2247 313.697306332 3 2 0 TRUE 0 0 NA A coding 926 2778 101 2878 40 PB.2566.1 chr3 - 1358 10 full-splice_match AKR1B1 rna13804 1373 10 14 1 multi-exon FALSE canonical 46 501 102 475.267293215 71 1 0 FALSE 0 0 NA C coding 316 948 37 984 5 PB.4993.8 chr7 - 6105 23 novel_in_catalog ZFYVE26 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 6 6 2346 96.2081077664 2 10 0 FALSE 0 0 NA B coding 761 2283 138 2420 15 PB.8903.11 chr14 - 1563 7 incomplete-splice_match HSPA8 rna48313 2258 9 2 693 internal_fragment FALSE canonical 48 13962 74 7292.43566993 5 1 0 FALSE 0 0 NA C coding 494 1482 80 1561 60 PB.8903.10 chr14 - 1517 8 novel_not_in_catalog HSPA8 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 778 14500.2807904 2 0 0 TRUE 0 0 NA C coding 401 1203 79 1281 35 PB.6446.14 chr10 - 5856 1 novel_in_catalog DGCR2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA C coding 28 84 294 377 75 PB.8067.2 chr13 - 3046 1 novel_in_catalog GFPT1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.5059.1 chr7 + 3122 1 novel_in_catalog SLIRP novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 7 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.3999.1 chr6 + 2869 16 novel_not_in_catalog PAPD4 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 295 321.414063165 24 2 0 TRUE 0 0 NA C coding 484 1452 396 1847 35 PB.3999.3 chr6 + 2912 16 novel_not_in_catalog PAPD4 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 339 321.414063165 3 9 0 FALSE 0 0 NA C coding 484 1452 442 1893 30 PB.3999.2 chr6 + 2868 16 full-splice_match PAPD4 rna21726 3251 16 16 367 multi-exon FALSE canonical 46 327 1078 266.923209931 2 2 0 FALSE 0 0 NA C coding 480 1440 407 1846 35 PB.7206.2 chr11 - 3105 1 genic_intron novelGene_1855 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11250.2 chr20 - 3718 25 novel_in_catalog CLCN7 novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 89 1697 185.175592344 8 2 0 FALSE 0 0 NA B coding 548 1644 81 1724 5 PB.11250.1 chr20 - 3676 25 novel_not_in_catalog CLCN7 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 4 7 179 190.934543758 2 3 0 FALSE 0 0 NA B coding 490 1470 213 1682 5 PB.9976.3 chr16 + 2974 16 novel_in_catalog NOL11 novel NA NA NA NA no_combination_of_known_junctions FALSE non_canonical 0 0 2368 347.768601228 2 1 0 FALSE 0 0 NA C coding 373 1119 610 1728 15 PB.3759.7 chr5 - 5555 35 incomplete-splice_match DDX60 rna20436 6046 38 485 6 5prime_fragment FALSE canonical 36 188 845 123.955637226 2 1 0 FALSE 0 0 NA C coding 1520 4560 381 4940 15 PB.11161.1 chr19 + 2158 6 full-splice_match ZNF331 rna60327 4035 6 78 1799 multi-exon FALSE canonical 38 144 128 396.688794901 2 2 0 FALSE 0 0 NA C coding 463 1389 338 1726 75 PB.11161.2 chr19 + 3898 5 full-splice_match ZNF331 rna60336 3951 5 51 2 multi-exon FALSE canonical 23 83 138 468.465580379 2 1 0 FALSE 0 0 NA C coding 463 1389 281 1669 15 PB.3759.4 chr5 - 5988 38 full-splice_match DDX60 rna20436 6046 38 52 6 multi-exon FALSE canonical 36 188 1278 128.316016148 66 2 0 FALSE 0 0 NA C coding 1712 5136 238 5373 15 PB.2560.1 chr3 - 5917 1 genic_intron novelGene_2429 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A coding 158 474 4954 5427 75 PB.4165.2 chr6 - 1820 1 genic_intron novelGene_2242 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.9018.1 chr15 - 6315 1 antisense novelGene_RAPGEF1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 1 NA FALSE 0 0 NA A coding 169 507 5462 5968 90 PB.3759.9 chr5 - 5994 34 novel_in_catalog DDX60 novel NA NA NA NA combination_of_known_junctions FALSE canonical 36 188 1276 126.696487718 2 12 0 FALSE 0 0 NA C coding 1575 4725 236 4960 80 PB.3759.8 chr5 - 3278 21 incomplete-splice_match DDX60 rna20436 6046 38 2761 7 5prime_fragment FALSE canonical 36 264 672 118.266647877 4 1 0 FALSE 0 0 NA C coding 804 2412 253 2664 15 PB.6592.5 chr10 - 2524 14 novel_not_in_catalog DDX17 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 27 3118.65435725 11 3 0 TRUE 0 0 NA B coding 650 1950 330 2279 95 PB.4692.1 chr7 - 1609 3 full-splice_match MESDC2 rna25368 1790 3 20 161 multi-exon FALSE canonical 47 718 241 88 19 0 0 FALSE 0 0 NA A coding 234 702 29 730 20 PB.2444.1 chr3 + 2498 1 intergenic novelGene_2157 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.6592.1 chr10 - 616 1 incomplete-splice_match DDX17 rna35971 4506 13 1620 2271 mono-exon FALSE canonical NA NA NA NA 13 4 NA FALSE 0 0 NA B coding 37 111 262 372 90 PB.10319.1 chr17 - 3104 1 genic_intron novelGene_1506 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8155.1 chr13 + 1231 8 full-splice_match LOC704637 rna44135 1290 8 55 4 multi-exon FALSE canonical 30 92 579 562.160119539 5 3 0 FALSE 0 0 NA A coding 314 942 118 1059 10 PB.11418.1 chr20 + 1302 11 full-splice_match LCMT1 rna61765 1359 11 59 -2 multi-exon FALSE canonical 31 163 210 132.506603609 2 1 0 FALSE 0 0 NA A coding 334 1002 98 1099 15 PB.7218.1 chr11 + 1751 3 full-splice_match TMEM263 rna39170 1785 3 61 -27 multi-exon FALSE canonical 33 214 143 313 24 0 0 FALSE 0 0 NA A coding 116 348 150 497 25 PB.8972.1 chr15 - 3078 15 full-splice_match RABL6 rna48790 3100 15 14 8 multi-exon FALSE canonical 33 74 1373 781.735888904 24 5 0 FALSE 0 0 NA A coding 728 2184 248 2431 5 PB.9927.1 chr16 - 3239 1 antisense novelGene_BCAS3_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.4768.1 chr7 + 3266 1 genic_intron novelGene_1520 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.11101.1 chr19 - 1610 5 full-splice_match AKT1S1 rna60033 2291 5 680 1 multi-exon FALSE canonical 0 0 17 154.593014072 5 0 0 FALSE 0 0 NA A coding 264 792 1 792 25 PB.3088.1 chr4 - 2728 21 full-splice_match SEC63 rna16936 4915 21 -38 2225 multi-exon FALSE canonical 40 336 412 270.835743579 42 0 0 FALSE 0 0 NA C coding 760 2280 189 2468 30 PB.3251.1 chr4 - 782 6 full-splice_match GTF3C6 rna17682 944 6 159 3 multi-exon FALSE canonical 45 503 121 529.39115973 2 0 0 FALSE 0 0 NA A coding 212 636 68 703 20 PB.6435.1 chr10 - 1776 8 full-splice_match CECR5 rna35059 1836 8 33 27 multi-exon FALSE canonical 24 76 148 151.026487743 11 0 0 FALSE 0 0 NA A coding 423 1269 23 1291 30 PB.3166.2 chr4 - 3124 1 genic_intron novelGene_2129 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A coding 101 303 2053 2355 90 PB.1908.1 chr2 + 1937 4 full-splice_match OXSM rna10209 1993 4 53 3 multi-exon TRUE canonical 16 35 234 146.625372975 2 0 0 FALSE 0 0 NA C coding 460 1380 518 1897 45 PB.946.4 chr1 - 1453 1 genic_intron novelGene_2445 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.12110.2 chrX - 3063 9 novel_not_in_catalog GABRE novel NA NA NA NA any annotated donor/acceptor FALSE canonical 4 4 126 78.1088983407 2 7 0 FALSE 0 0 NA B coding 124 372 747 1118 15 PB.9083.1 chr15 - 3117 26 full-splice_match LRSAM1 rna49349 3151 26 31 3 multi-exon FALSE canonical 19 27 2392 119.724684172 6 4 0 FALSE 0 0 NA A coding 723 2169 347 2515 10 PB.94.1 chr1 + 2835 1 genic_intron novelGene_322 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.7599.4 chr12 - 2101 5 novel_in_catalog ORMDL1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 4 4 63 768.795811643 2 2 0 FALSE 0 0 NA C coding 153 459 204 662 20 PB.7352.1 chr11 - 2691 4 full-splice_match VPS37B rna39662 3559 4 852 16 multi-exon FALSE canonical 31 149 120 82.5953993876 97 2 0 FALSE 0 0 NA C coding 285 855 10 864 45 PB.10277.6 chr17 + 2735 1 genic_intron novelGene_862 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.9903.2 chr16 + 1642 11 incomplete-splice_match FMNL1 rna53716 3638 27 1989 7 internal_fragment FALSE canonical 24 66 220 74.2091638546 2 0 0 FALSE 0 0 NA A coding 431 1293 27 1319 30 PB.10526.1 chr18 + 1755 1 genic_intron novelGene_1342 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 2 NA FALSE 0 0 NA A coding 111 333 728 1060 90 PB.8582.1 chr14 - 2620 16 full-splice_match PRMT3 rna46502 2696 16 16 60 multi-exon FALSE canonical 34 87 196 224.568475081 9 1 0 FALSE 0 0 NA A coding 531 1593 169 1761 50 PB.774.2 chr1 - 2961 14 full-splice_match KIAA0907 rna4246 2915 14 -15 -31 multi-exon FALSE canonical 35 173 73 337.612203571 48 0 0 FALSE 0 0 NA C coding 614 1842 36 1877 10 PB.5754.1 chr9 - 3066 6 novel_not_in_catalog ZNF25 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 24 62 59 321.678410839 9 2 0 FALSE 0 0 NA A coding 314 942 145 1086 70 PB.1175.2 chr1 + 1589 1 genic LGALS8 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 25 PB.5170.1 chr7 + 1176 8 full-splice_match CRIP2 rna28052 1387 8 205 6 multi-exon FALSE canonical 27 215 379 183.57832116 4 0 0 FALSE 0 0 NA A coding 208 624 43 666 15 PB.5477.5 chr8 - 2793 6 full-splice_match YWHAZ rna29699 3298 6 352 153 multi-exon FALSE canonical 46 792 92 3895.86909431 101 1 0 FALSE 0 0 NA C coding 245 735 104 838 25 PB.774.3 chr1 - 2932 14 full-splice_match KIAA0907 rna4245 2981 14 45 4 multi-exon FALSE canonical 36 173 72 336.136876882 6 20 0 FALSE 0 0 NA C coding 510 1530 35 1564 10 PB.1261.1 chr2 - 2852 1 intergenic novelGene_641 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.4666.1 chr7 - 1160 1 full-splice_match IMP3 rna25205 1123 1 -31 -6 mono-exon FALSE canonical NA NA NA NA 14 0 NA FALSE 0 0 NA A coding 184 552 86 637 20 PB.1465.1 chr2 - 3343 1 genic_intron novelGene_1510 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8067.1 chr13 - 2699 19 full-splice_match GFPT1 rna43696 3869 19 -30 1200 multi-exon FALSE canonical 37 718 186 421.5862901 46 1 0 FALSE 0 0 NA C coding 681 2043 180 2222 15 PB.6286.5 chr10 + 2929 19 novel_not_in_catalog RBM39 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 11 13 1640 2623.34347732 2 2 0 FALSE 0 0 NA C coding 260 780 905 1684 35 PB.1141.1 chr1 - 3039 5 full-splice_match TAF5L rna6232 3015 5 -37 13 multi-exon FALSE canonical 5 5 88 173.744064647 4 4 0 FALSE 0 0 NA C coding 589 1767 92 1858 60 PB.1967.6 chr2 - 1585 7 novel_in_catalog LSG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 431 128 160.371443842 2 6 0 FALSE 0 0 NA B coding 255 765 30 794 65 PB.11856.5 chrX + 3565 27 novel_not_in_catalog UBA1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 183 695.708272195 2 2 0 TRUE 0 0 NA C coding 1058 3174 193 3366 5 PB.12120.3 chrX - 3147 21 full-splice_match ARHGAP4 rna65581 3240 21 90 3 multi-exon FALSE canonical 18 40 472 226.450877675 8 0 0 FALSE 0 0 NA C coding 925 2775 38 2812 15 PB.5428.2 chr8 - 2598 10 full-splice_match RMDN1 rna29450 2705 10 92 15 multi-exon FALSE canonical 44 494 162 269.67016891 4 4 0 FALSE 0 0 NA C coding 314 942 34 975 70 PB.10663.1 chr19 - 1484 1 antisense novelGene_MCOLN1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A coding 230 690 205 894 90 PB.12060.2 chrX - 3482 28 incomplete-splice_match THOC2 rna64976 4992 39 33 1477 internal_fragment FALSE canonical 43 523 2163 146.955775661 2 0 0 FALSE 0 0 NA B coding 1151 3453 28 3480 65 PB.9412.1 chr15 - 2886 1 genic_intron novelGene_1853 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 60 PB.9013.2 chr15 + 3555 2 incomplete-splice_match SETX rna49017 11122 27 7564 3 internal_fragment FALSE canonical 48 1544 28 NA 2 2 0 FALSE 0 0 NA B coding 249 747 26 772 10 PB.9412.2 chr15 - 3365 1 genic_intron novelGene_1857 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11747.1 chr20 + 3044 17 novel_not_in_catalog SPG7 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 881 512.188441884 106 11 0 TRUE 0 0 NA A coding 423 1269 1123 2391 35 PB.7637.2 chr12 + 1520 13 incomplete-splice_match NOP58 rna41237 1847 15 -109 436 3prime_fragment FALSE canonical 45 810 1441 294.377308908 11 0 0 FALSE 0 0 NA B coding 449 1347 174 1520 50 PB.1487.1 chr2 + 1675 1 genic_intron novelGene_1625 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 12 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.5428.1 chr8 - 4372 1 genic RMDN1 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 14 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.3626.1 chr5 + 1525 7 full-splice_match INTS12 rna19607 1525 7 8 -8 multi-exon FALSE canonical 32 81 28 132.969921411 5 0 0 FALSE 0 0 NA A coding 462 1386 38 1423 20 PB.7834.1 chr13 - 1876 2 intergenic novelGene_188 novel NA NA NA NA no_subcategory FALSE canonical 4 5 55 NA 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA 40 PB.8908.6 chr14 + 2836 19 novel_in_catalog VWA5A novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 341 2623 224.189651858 2 3 0 FALSE 0 0 NA C coding 700 2100 159 2258 10 PB.5172.302 chr7 + 1509 7 fusion LOC720839_LOC106999609 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 354 2896.72884475 2 8 0 TRUE 0 0 NA B coding 463 1389 75 1463 25 PB.8908.4 chr14 + 2646 19 full-splice_match VWA5A rna48361 3616 19 98 872 multi-exon FALSE canonical 34 341 2434 228.008771761 36 0 0 FALSE 0 0 NA C coding 786 2358 154 2511 5 PB.8908.5 chr14 + 3067 18 novel_in_catalog VWA5A novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 341 2855 230.362757407 2 3 0 FALSE 0 0 NA C coding 329 987 159 1145 5 PB.8908.2 chr14 + 3528 19 full-splice_match VWA5A rna48362 3601 19 98 -25 multi-exon FALSE canonical 34 184 2032 255.103900401 32 0 0 FALSE 0 0 NA C coding 781 2343 154 2496 5 PB.8908.3 chr14 + 3382 18 novel_in_catalog VWA5A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 8 12 28 298.23145374 7 0 0 FALSE 0 0 NA C coding 781 2343 44 2386 30 PB.5172.305 chr7 + 1510 12 fusion LOC720839_LOC106999609 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 234 1918.98619067 2 10 0 TRUE 0 0 NA B coding 245 735 729 1463 25 PB.8908.1 chr14 + 3410 18 novel_in_catalog VWA5A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 8 12 28 275.228995566 11 0 0 FALSE 0 0 NA C coding 786 2358 44 2401 30 PB.1506.3 chr2 - 3027 13 novel_not_in_catalog GNL3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 21 47 1559 637.38136151 4 1 0 FALSE 0 0 NA C coding 271 813 1986 2798 35 PB.1506.2 chr2 - 1756 13 incomplete-splice_match GNL3 rna8127 2013 15 248 9 5prime_fragment FALSE canonical 43 909 1450 435.816475136 6 0 0 FALSE 0 0 NA C coding 444 1332 199 1530 35 PB.6226.1 chr10 - 1275 13 full-splice_match DNTTIP1 rna33940 1290 13 0 15 multi-exon FALSE canonical 28 66 173 131.658649545 4 1 0 FALSE 0 0 NA A coding 329 987 69 1055 35 PB.5172.308 chr7 + 1943 10 fusion LOC711872_LOC106999609 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 407 3252.75744561 2 7 0 TRUE 0 0 NA B coding 375 1125 697 1821 35 PB.10635.1 chr19 - 2872 4 intergenic novelGene_137 novel NA NA NA NA no_subcategory FALSE canonical 32 351 68 213.180674546 3 0 0 FALSE 0 0 NA A coding 118 354 40 393 90 PB.10990.1 chr19 + 3089 2 full-splice_match ZNF574 rna59375 3167 2 61 17 multi-exon FALSE canonical 11 16 125 NA 40 0 0 FALSE 0 0 NA A coding 896 2688 146 2833 30 PB.1506.4 chr2 - 2927 12 novel_in_catalog GNL3 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 34 177 1923 638.220181442 2 1 0 FALSE 0 0 NA C coding 216 648 2054 2701 35 PB.4487.1 chr7 - 3288 1 genic_intron novelGene_470 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA A coding 99 297 517 813 90 PB.1916.5 chr2 - 1521 1 novel_in_catalog PDCD6IP novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA C coding 121 363 146 508 90 PB.8746.1 chr14 - 1580 9 full-splice_match CCDC90B rna47449 1346 9 -23 -211 multi-exon FALSE canonical 47 544 489 548.279125993 3 0 0 FALSE 0 0 NA A coding 254 762 390 1151 30 PB.9102.1 chr15 - 1375 4 full-splice_match ARPC5L rna49432 2445 4 1067 3 multi-exon FALSE non_canonical 0 0 284 545.644572959 4 3 0 FALSE 0 0 NA A coding 152 456 139 594 25 PB.11353.7 chr20 - 1808 8 incomplete-splice_match MYH11 rna61574 6754 41 4938 8 5prime_fragment FALSE canonical 12 72 378 187.957441992 4 0 0 FALSE 0 0 NA C coding 319 957 43 999 25 PB.5083.2 chr7 - 1093 1 novel_in_catalog TRIP11 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA B coding 101 303 54 356 15 PB.7696.15 chr12 + 2886 6 novel_in_catalog SLC11A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 25 409 1910 204.919496388 4 4 0 FALSE 0 0 NA C coding 108 324 82 405 85 PB.8248.1 chr14 + 1399 1 genic_intron novelGene_42 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 3 NA FALSE 0 0 NA A coding 172 516 97 612 80 PB.3587.1 chr5 - 2851 1 incomplete-splice_match GPRIN3 rna19414 12133 2 8437 846 mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.2364.1 chr3 + 3380 7 incomplete-splice_match SEMA3C rna12763 3269 18 1662 -1773 internal_fragment FALSE canonical 31 517 206 105.0428484 2 0 0 FALSE 0 0 NA A coding 263 789 228 1016 20 PB.514.3 chr1 - 1640 1 genic_intron novelGene_1697 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA A coding 78 234 106 339 80 PB.4848.1 chr7 - 3202 2 genic_intron novelGene_1728 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 540 NA 4 6 0 FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.4642.1 chr7 - 3602 1 genic_intron novelGene_1031 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 11 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.7800.8 chr12 - 1844 13 novel_not_in_catalog LOC100425941 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 25 81 1657 134.309344425 2 1 0 FALSE 0 0 NA B coding 546 1638 201 1838 20 PB.340.1 chr1 - 1627 3 full-splice_match C1H1orf210 rna1813 823 3 1 -805 multi-exon FALSE canonical 5 17 138 7.48331477355 11 0 0 FALSE 0 0 NA A coding 113 339 237 575 65 PB.2225.9 chr3 + 2734 12 novel_not_in_catalog MYO1G novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 22 215.436765665 2 1 0 TRUE 0 0 NA C coding 700 2100 41 2140 80 PB.11268.5 chr20 + 2552 13 novel_in_catalog E4F1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 28 52 120 195.578628689 2 0 0 FALSE 0 0 NA C coding 526 1578 438 2015 15 PB.11268.2 chr20 + 2862 13 novel_not_in_catalog E4F1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 180 201.03730997 3 4 0 FALSE 0 0 NA C coding 447 1341 1357 2697 15 PB.11268.1 chr20 + 2570 14 full-splice_match E4F1 rna61118 2546 14 -26 2 multi-exon FALSE canonical 28 52 210 188.40912929 10 0 0 FALSE 0 0 NA C coding 780 2340 66 2405 15 PB.8397.1 chr14 - 2532 2 antisense novelGene_EHD1_AS novel NA NA NA NA no_subcategory TRUE canonical 0 0 2283 NA 2 0 0 FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.2225.2 chr3 + 5776 10 novel_in_catalog MYO1G novel NA NA NA NA combination_of_known_junctions FALSE canonical 28 180 4415 157.6578574 7 1 0 FALSE 0 0 NA C coding 462 1386 3798 5183 75 PB.2993.3 chr4 - 3893 11 novel_not_in_catalog DST novel NA NA NA NA any annotated donor/acceptor FALSE canonical 26 147 2161 1109.48817028 3 1 0 FALSE 0 0 NA B coding 1046 3138 755 3892 55 PB.2225.5 chr3 + 5672 11 novel_not_in_catalog MYO1G novel NA NA NA NA any annotated donor/acceptor FALSE canonical 13 40 25 198.519520451 2 1 0 TRUE 0 0 NA C coding 462 1386 3693 5078 80 PB.2478.1 chr3 + 3961 6 full-splice_match CBLL1 rna13383 4232 6 293 -22 multi-exon FALSE canonical 41 211 449 113.679373679 8 0 0 FALSE 0 0 NA A coding 491 1473 10 1482 25 PB.11856.2 chrX + 3521 26 novel_not_in_catalog UBA1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 148 623.91746249 2 9 0 FALSE 0 0 NA C coding 1058 3174 149 3322 5 PB.8774.1 chr14 - 3939 1 genic_intron novelGene_1659 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.4497.5 chr7 + 1684 10 novel_not_in_catalog SQRDL novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 86 520.252823154 2 2 0 FALSE 0 0 NA C coding 450 1350 104 1453 40 PB.4497.4 chr7 + 1517 11 novel_not_in_catalog SQRDL novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 536 650.583584177 2 9 0 TRUE 0 0 NA C coding 167 501 79 579 35 PB.4497.2 chr7 + 1639 10 full-splice_match SQRDL rna24374 1981 10 322 20 multi-exon FALSE canonical 37 279 41 457.836215256 148 0 0 FALSE 0 0 NA C coding 450 1350 59 1408 40 PB.4497.1 chr7 + 1764 10 novel_not_in_catalog SQRDL novel NA NA NA NA any annotated donor/acceptor FALSE canonical 7 10 166 517.888984243 2 0 0 FALSE 0 0 NA C coding 450 1350 184 1533 40 PB.150.1 chr1 - 3057 1 genic_intron novelGene_483 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A coding 103 309 1815 2123 90 PB.10348.1 chr17 + 3309 1 intergenic novelGene_1660 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 10 NA FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.622.2 chr1 + 3362 21 novel_not_in_catalog MOV10 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 52 119.816526406 2 6 0 TRUE 0 0 NA C coding 1003 3009 125 3133 35 PB.6086.1 chr9 - 3505 14 full-splice_match CPXM2 rna33241 3723 14 170 48 multi-exon FALSE canonical 19 101 450 59.0508255658 21 5 0 FALSE 0 0 NA A coding 756 2268 147 2414 75 PB.1681.2 chr2 - 3076 16 novel_not_in_catalog SENP2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 221 926.031316965 2 8 2 FALSE 0 0 NA C coding 473 1419 398 1816 55 PB.5940.2 chr9 - 2984 21 full-splice_match NOC3L rna32376 3473 21 36 453 multi-exon FALSE canonical 41 312 2372 172.238207143 31 0 0 FALSE 0 0 NA A coding 799 2397 102 2498 65 PB.4192.2 chr6 + 2668 16 incomplete-splice_match LOC698045 rna22708 8080 34 9 5403 3prime_fragment FALSE canonical 46 507 2054 550.540643368 2 0 0 FALSE 0 0 NA B coding 843 2529 140 2668 60 PB.9589.1 chr16 + 1860 13 full-splice_match DRG2 rna52125 1876 13 11 5 multi-exon FALSE canonical 39 354 1053 194.404218061 28 0 0 FALSE 0 0 NA A coding 364 1092 46 1137 30 PB.12122.2 chrX - 3329 10 novel_not_in_catalog HCFC1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 58 44.821869662 2 2 0 TRUE 0 0 NA B coding 444 1332 228 1559 35 PB.11053.4 chr19 + 1937 10 novel_not_in_catalog SAE1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 891 1026.62066997 2 4 3 TRUE 0 0 NA C coding 328 984 13 996 10 PB.4179.1 chr6 - 818 4 full-splice_match MZB1 rna22650 811 4 -10 3 multi-exon FALSE canonical 26 535 467 25.3771550809 3 0 0 FALSE 0 0 NA A coding 188 564 58 621 20 PB.12213.1 chrUn_NW_015051973v1 + 1170 6 intergenic novelGene_34 novel NA NA NA NA no_subcategory FALSE canonical 47 6841 435 1898.38931729 5 9 0 FALSE 0 0 NA A coding 266 798 66 863 45 PB.2133.4 chr3 + 3745 13 novel_in_catalog BRAT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 1 1 2202 87.5899537618 3 4 0 FALSE 0 0 NA C coding 821 2463 1069 3531 30 PB.2133.5 chr3 + 5457 10 novel_not_in_catalog BRAT1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 3289 97.7701385905 3 7 0 FALSE 0 0 NA C coding 264 792 4452 5243 30 PB.2133.3 chr3 + 3650 14 novel_not_in_catalog BRAT1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 463 92.5958962374 2 2 0 TRUE 0 0 NA C coding 641 1923 1513 3435 30 PB.2133.1 chr3 + 2685 14 full-splice_match BRAT1 rna11451 2957 14 244 28 multi-exon TRUE canonical 1 1 1166 84.7348806573 51 0 0 FALSE 0 0 NA C coding 821 2463 33 2495 50 PB.11053.2 chr19 + 1966 8 full-splice_match SAE1 rna59722 2015 8 45 4 multi-exon FALSE canonical 42 351 934 860.083716856 4 1 1 FALSE 0 0 NA C coding 310 930 57 986 10 PB.5444.1 chr8 - 2888 1 intergenic novelGene_1738 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.4159.4 chr6 - 1907 9 full-splice_match H2AFY rna22506 1879 9 -20 -8 multi-exon FALSE canonical 43 484 171 1025.46379751 83 1 0 FALSE 0 0 NA C coding 371 1113 205 1317 5 PB.3605.3 chr5 - 1468 9 full-splice_match LOC711061 rna19496 1772 9 301 3 multi-exon FALSE canonical 16 1375 189 196.52226337 48 1 0 FALSE 0 0 NA C coding 375 1125 70 1194 15 PB.4159.6 chr6 - 1897 9 novel_not_in_catalog H2AFY novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 794 1324.21033073 3 10 0 TRUE 0 0 NA C coding 367 1101 206 1306 5 PB.8450.1 chr14 - 5788 20 novel_not_in_catalog DAGLA novel NA NA NA NA any annotated donor/acceptor TRUE canonical 4 7 99 20.7123151772 5 0 0 FALSE 0 0 NA C coding 1043 3129 144 3272 15 PB.1070.1 chr1 + 1559 1 genic_intron novelGene_2599 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1385.1 chr2 + 811 4 full-splice_match MRPS25 rna7412 1133 4 -32 354 multi-exon FALSE canonical 48 1183 193 488.525331994 3 0 0 FALSE 0 0 NA A coding 173 519 60 578 10 PB.726.1 chr1 - 3011 11 full-splice_match RORC rna3907 3048 11 33 4 multi-exon FALSE canonical 21 483 225 272.791128888 19 0 0 FALSE 0 0 NA A coding 518 1554 70 1623 20 PB.8450.2 chr14 - 5813 20 full-splice_match DAGLA rna45603 5807 20 -13 7 multi-exon FALSE canonical 0 0 127 21.5174347914 5 0 0 FALSE 0 0 NA C coding 1043 3129 172 3300 20 PB.7082.1 chr11 - 1831 11 novel_not_in_catalog WIF1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 124 97.7752524926 3 0 0 TRUE 0 0 NA A coding 379 1137 171 1307 85 PB.6036.2 chr9 - 2428 21 full-splice_match XPNPEP1 rna32887 2432 21 -5 9 multi-exon FALSE canonical 41 506 268 177.853872603 5 0 0 FALSE 0 0 NA C coding 666 1998 23 2020 25 PB.7633.8 chr12 + 2604 9 novel_in_catalog CASP8 novel NA NA NA NA combination_of_known_junctions FALSE canonical 28 114 1014 424.178028662 2 4 0 FALSE 0 0 NA C coding 304 912 82 993 15 PB.1398.10 chr2 + 1478 1 genic_intron novelGene_1098 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 17 0 NA FALSE 0 0 NA A coding 115 345 683 1027 85 PB.8502.1 chr14 - 1661 1 antisense novelGene_CELF1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 9 0 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.6514.1 chr10 - 1978 10 full-splice_match NIPSNAP1 rna35575 2224 10 240 6 multi-exon FALSE canonical 25 169 109 370.793743205 2 2 0 FALSE 0 0 NA A coding 284 852 12 863 25 PB.1774.1 chr2 + 3822 17 full-splice_match HPS3 rna9447 4107 17 38 247 multi-exon FALSE canonical 26 70 316 106.967284718 19 0 0 FALSE 0 0 NA A coding 1004 3012 100 3111 25 PB.4556.5 chr7 - 1670 1 genic_intron novelGene_790 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.6409.2 chr10 - 2062 5 full-splice_match RBBP9 rna34901 1415 5 32 -679 multi-exon FALSE canonical 44 401 377 126.372465355 2 1 0 FALSE 0 0 NA A coding 186 558 44 601 85 PB.10320.2 chr17 - 1585 1 genic_intron novelGene_1511 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.9898.2 chr16 + 2945 1 novel_in_catalog NMT1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.9898.1 chr16 + 1832 12 full-splice_match NMT1 rna53697 4899 12 17 3050 multi-exon TRUE canonical 48 1072 604 377.053046666 8 0 0 FALSE 0 0 NA C coding 496 1488 9 1496 45 PB.9057.8 chr15 - 5773 43 incomplete-splice_match SPTAN1 rna49199 7779 57 2004 2 5prime_fragment FALSE canonical 33 1184 4979 703.049073678 2 2 0 FALSE 0 0 NA C coding 1705 5115 337 5451 20 PB.1934.1 chr2 - 1573 1 incomplete-splice_match TGFBR2 rna10353 4369 7 2759 38 mono-exon FALSE canonical NA NA NA NA 6 2 NA FALSE 0 0 NA B non_coding NA NA NA NA 10 PB.1934.2 chr2 - 2945 3 incomplete-splice_match TGFBR2 rna10353 4369 7 1386 38 5prime_fragment FALSE canonical 47 1885 248 264.49952741 4 6 0 FALSE 0 0 NA B coding 134 402 24 425 10 PB.11086.1 chr19 - 1730 7 novel_in_catalog PIH1D1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1103 1612 366.00273223 2 2 0 FALSE 0 0 NA A coding 124 372 814 1185 5 PB.10893.1 chr19 + 1866 9 full-splice_match LSR rna58752 2486 9 615 5 multi-exon FALSE canonical 11 16 742 38.3275357935 6 0 0 FALSE 0 0 NA C coding 581 1743 22 1764 35 PB.10893.2 chr19 + 1716 8 full-splice_match LSR rna58754 2339 8 621 2 multi-exon FALSE canonical 9 19 589 40.2243707222 5 2 0 FALSE 0 0 NA C coding 532 1596 16 1611 35 PB.1293.1 chr2 - 2795 1 intergenic novelGene_786 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.9017.2 chr15 + 1221 1 intergenic novelGene_159 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.4286.1 chr6 - 1278 9 full-splice_match TIMD4 rna23144 1264 9 29 -43 multi-exon FALSE canonical 12 231 845 166.315964357 29 1 0 FALSE 0 0 NA A coding 369 1107 29 1135 10 PB.1546.1 chr2 + 3387 24 novel_not_in_catalog UBA7 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1092 145.144755331 5 9 0 TRUE 0 0 NA C coding 653 1959 1334 3292 40 PB.11738.3 chr20 - 5605 1 genic_intron novelGene_1483 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 6 NA FALSE 0 0 NA A coding 106 318 2382 2699 80 PB.3384.1 chr5 - 1517 1 antisense novelGene_PI4K2B_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.7009.1 chr11 + 1400 7 full-splice_match CDK2 rna38158 2311 7 -2 913 multi-exon FALSE canonical 39 564 825 151.023177029 3 0 0 FALSE 0 0 NA A coding 298 894 238 1131 85 PB.6238.1 chr10 - 1231 5 full-splice_match PKIG rna34019 1338 5 104 3 multi-exon FALSE canonical 33 141 89 470.102116566 2 1 0 FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.8797.6 chr14 - 2944 7 novel_in_catalog CASP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 536 1465 83.6241591886 3 3 0 FALSE 0 0 NA C coding 225 675 28 702 50 PB.4575.2 chr7 - 1443 1 incomplete-splice_match CA12 rna24740 4495 11 2778 275 mono-exon FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 15 PB.5384.1 chr8 + 3117 1 intergenic novelGene_1309 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.985.1 chr1 + 1629 2 full-splice_match RABIF rna5413 946 2 -20 -663 multi-exon FALSE canonical 40 191 156 NA 3 0 0 FALSE 0 0 NA A coding 123 369 31 399 5 PB.4575.3 chr7 - 3929 1 genic_intron novelGene_857 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 17 NA FALSE 0 0 NA A coding 105 315 1195 1509 95 PB.6744.1 chr11 - 2749 10 full-splice_match ZNF384 rna36710 3295 10 285 261 multi-exon FALSE canonical 20 35 164 82.2313808713 5 12 0 FALSE 0 0 NA C coding 515 1545 230 1774 15 PB.7328.1 chr11 - 5671 2 genic_intron novelGene_2068 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 1021 NA 2 10 0 FALSE 0 0 NA A coding 110 330 4279 4608 90 PB.4148.1 chr6 - 1845 7 full-splice_match PPP2CA rna22458 3003 7 598 560 multi-exon FALSE canonical 48 2724 350 491.947151633 94 0 0 FALSE 0 0 NA C coding 309 927 249 1175 45 PB.9017.6 chr15 + 5962 1 genic_intron novelGene_161 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 6 NA FALSE 0 0 NA A coding 121 363 5211 5573 75 PB.5237.13 chr8 + 1533 9 novel_in_catalog PDLIM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 12 16 636 158.955968746 12 2 0 FALSE 0 0 NA C coding 352 1056 97 1152 45 PB.10216.1 chr17 - 1557 10 incomplete-splice_match MTRF1 rna55127 2342 11 256 529 5prime_fragment FALSE canonical 36 284 1333 59.8915686888 3 1 0 FALSE 0 0 NA A coding 445 1335 110 1444 45 PB.8915.1 chr14 - 1545 4 novel_in_catalog TMEM218 novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 177 43 264.36338627 2 2 0 FALSE 0 0 NA A coding 115 345 612 956 20 PB.3253.1 chr4 + 1618 1 genic_intron novelGene_2407 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A coding 100 300 604 903 85 PB.2994.1 chr4 - 3309 3 novel_not_in_catalog DST novel NA NA NA NA any annotated donor/acceptor FALSE canonical 5 55 130 708.499823571 2 4 0 FALSE 0 0 NA B coding 130 390 47 436 75 PB.10559.2 chr19 + 3131 7 novel_not_in_catalog CIRBP novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 435 3903.86833794 97 1 0 TRUE 0 0 NA C coding 143 429 83 511 30 PB.10559.3 chr19 + 3105 7 novel_not_in_catalog CIRBP novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 501 4258.58826373 2 10 0 TRUE 0 0 NA C coding 186 558 86 643 30 PB.9047.1 chr15 + 2075 1 full-splice_match DOLK rna49160 2013 1 2 -64 mono-exon FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA A coding 538 1614 305 1918 15 PB.10559.1 chr19 + 1324 7 full-splice_match CIRBP rna57138 1323 7 -16 15 multi-exon FALSE canonical 45 237 431 3241.41095821 11 0 0 FALSE 0 0 NA C coding 172 516 83 598 35 PB.10559.6 chr19 + 3319 6 novel_in_catalog CIRBP novel NA NA NA NA combination_of_known_junctions FALSE canonical 45 237 431 3543.04149002 5 23 0 FALSE 0 0 NA C coding 207 621 83 703 30 PB.10559.7 chr19 + 3144 7 novel_not_in_catalog CIRBP novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 440 3903.86833794 3 6 0 TRUE 0 0 NA C coding 200 600 83 682 30 PB.10559.4 chr19 + 2168 9 novel_not_in_catalog CIRBP novel NA NA NA NA any annotated donor/acceptor FALSE canonical 34 110 2013 3673.61810753 3 0 0 TRUE 0 0 NA C coding 172 516 86 601 30 PB.10559.5 chr19 + 2541 8 novel_not_in_catalog CIRBP novel NA NA NA NA any annotated donor/acceptor FALSE canonical 34 110 2386 3910.78214683 4 0 0 TRUE 0 0 NA C coding 207 621 83 703 30 PB.6242.5 chr10 - 2565 1 antisense novelGene_LOC107000396_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 5 NA FALSE 0 0 NA A coding 90 270 105 374 90 PB.6242.4 chr10 - 1784 1 genic_intron novelGene_460 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.10559.9 chr19 + 2902 1 novel_in_catalog CIRBP novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA C coding 104 312 1557 1868 30 PB.6242.1 chr10 - 4476 10 novel_not_in_catalog HNF4A novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 2 153 199.449241663 11 2 0 FALSE 0 0 NA B coding 452 1356 105 1460 20 PB.1054.1 chr1 - 1700 1 incomplete-splice_match QSOX1 rna5803 5613 12 1640 2274 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA C coding 182 546 153 698 20 PB.6242.2 chr10 - 4442 10 novel_not_in_catalog HNF4A novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 2 149 212.696967538 5 5 0 FALSE 0 0 NA B coding 442 1326 101 1426 20 PB.6540.4 chr10 - 2957 9 novel_in_catalog PISD novel NA NA NA NA combination_of_known_junctions FALSE canonical 28 47 597 261.788082234 2 2 0 FALSE 0 0 NA C coding 439 1317 548 1864 15 PB.4262.4 chr6 - 2889 18 full-splice_match TNIP1 rna23070 2918 18 19 10 multi-exon FALSE canonical 35 159 186 320.512090256 216 1 0 FALSE 0 0 NA C coding 637 1911 223 2133 35 PB.6540.6 chr10 - 2322 8 full-splice_match PISD rna35699 2670 8 340 8 multi-exon FALSE canonical 40 158 328 211.917436753 2 0 0 FALSE 0 0 NA C coding 409 1227 8 1234 35 PB.518.3 chr1 + 3097 3 novel_not_in_catalog LRRC8D novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 26 129 4 1 0 FALSE 0 0 NA C coding 858 2574 174 2747 25 PB.4590.1 chr7 + 2818 1 antisense novelGene_OAZ2_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.2001.6 chr3 + 3392 14 novel_in_catalog LSS novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 0 0 327 87.9886356298 2 1 0 FALSE 0 0 NA C coding 389 1167 346 1512 25 PB.4262.3 chr6 - 2724 17 novel_not_in_catalog TNIP1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1823 415.033733569 2 1 0 FALSE 0 0 NA C coding 564 1692 201 1892 30 PB.4262.2 chr6 - 2862 18 novel_not_in_catalog TNIP1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1962 387.006459894 2 0 0 FALSE 0 0 NA C coding 633 1899 181 2079 30 PB.5470.1 chr8 + 5806 19 incomplete-splice_match VPS13B rna29658 12789 55 6975 8 internal_fragment TRUE canonical 40 146 3193 153.068612067 2 0 0 FALSE 0 0 NA B coding 1183 3549 421 3969 45 PB.1387.1 chr2 + 3099 3 novel_not_in_catalog LOC100423625 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1288 77.49838708 5 6 0 TRUE 0 0 NA B coding 15 45 309 353 15 PB.1387.2 chr2 + 1561 2 novel_not_in_catalog LOC100423625 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 39 155 126 NA 2 4 0 FALSE 0 0 NA B coding 15 45 305 349 80 PB.1387.3 chr2 + 1794 2 novel_not_in_catalog LOC100423625 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 47 395 359 NA 9 1 0 FALSE 0 0 NA B non_coding NA NA NA NA 80 PB.1387.4 chr2 + 3313 3 novel_not_in_catalog LOC100423625 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1502 197.499367088 3 6 0 TRUE 0 0 NA B non_coding NA NA NA NA 15 PB.518.5 chr1 + 2485 1 incomplete-splice_match LRRC8D rna2880 3345 2 854 7 mono-exon FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA C coding 707 2121 14 2134 25 PB.9417.16 chr15 + 1845 3 novel_in_catalog SYK novel NA NA NA NA combination_of_known_junctions FALSE canonical 27 168 157 405 2 4 0 FALSE 0 0 NA C coding 193 579 199 777 75 PB.1054.5 chr1 - 2820 13 novel_not_in_catalog QSOX1 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 4 4 2118 474.153983427 2 1 0 FALSE 0 0 NA C coding 701 2103 22 2124 15 PB.3755.6 chr5 - 2754 1 genic_intron novelGene_2480 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 7 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.6141.2 chr10 - 1511 5 full-splice_match GID8 rna33545 4271 5 17 2743 multi-exon FALSE canonical 41 217 99 193.873670208 23 5 0 FALSE 0 0 NA A coding 228 684 112 795 45 PB.1054.4 chr1 - 2757 13 novel_not_in_catalog QSOX1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 8 8 2057 473.464887822 4 6 0 FALSE 0 0 NA C coding 669 2007 57 2063 15 PB.3731.4 chr5 - 1790 7 full-splice_match TMEM154 rna20260 3215 7 188 1237 multi-exon FALSE canonical 33 498 102 364.098887667 228 1 0 FALSE 0 0 NA C coding 183 549 39 587 65 PB.9866.1 chr16 + 3877 4 full-splice_match AOC3 rna53510 4031 4 144 10 multi-exon FALSE canonical 19 112 1903 55.4616984954 75 0 0 FALSE 0 0 NA C coding 763 2289 18 2306 35 PB.9866.2 chr16 + 1755 1 incomplete-splice_match AOC3 rna53511 2897 5 1131 12 mono-exon FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA C coding 89 267 85 351 35 PB.4580.1 chr7 - 2696 12 full-splice_match DAPK2 rna24770 2654 12 -48 6 multi-exon FALSE canonical 21 97 93 137.851369235 6 0 0 FALSE 0 0 NA A coding 360 1080 130 1209 20 PB.268.2 chr1 - 4000 6 novel_in_catalog AK2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1597 119 832.351488255 2 8 0 FALSE 0 0 NA C coding 239 717 27 743 10 PB.1847.3 chr2 + 2784 20 novel_not_in_catalog COPB2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2353 791.121356051 2 1 0 TRUE 0 0 NA C coding 825 2475 38 2512 30 PB.268.1 chr1 - 1468 7 full-splice_match AK2 rna1365 2642 7 35 1139 multi-exon FALSE canonical 48 1101 711 1092.67149684 49 1 0 FALSE 0 0 NA C coding 232 696 18 713 35 PB.952.1 chr1 + 5369 1 genic_intron novelGene_2451 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 18 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5461.1 chr8 + 1987 7 novel_not_in_catalog LOC702648 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 36 613 271 752.958166169 12 0 0 TRUE 0 0 NA A coding 226 678 173 850 25 PB.7198.1 chr11 - 3928 1 genic_intron novelGene_1845 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA A coding 144 432 889 1320 90 PB.8898.3 chr14 - 1814 1 genic_intron novelGene_1985 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.9417.13 chr15 + 3119 1 genic_intron novelGene_1890 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.11631.1 chr20 - 3176 3 novel_not_in_catalog MTSS1L novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1811 61.4979674461 7 23 0 TRUE 0 0 NA B coding 143 429 360 788 15 PB.11631.3 chr20 - 3276 2 incomplete-splice_match MTSS1L rna62708 3284 19 1860 -1852 5prime_fragment FALSE canonical 25 123 34 NA 3 43 0 FALSE 0 0 NA B coding 143 429 361 789 25 PB.9882.1 chr16 - 2259 5 full-splice_match LSM12 rna53592 1052 5 -89 -1118 multi-exon FALSE canonical 44 478 225 154.175224988 7 3 0 FALSE 0 0 NA A coding 195 585 102 686 15 PB.8601.1 chr14 - 899 5 full-splice_match C14H11orf58 rna46633 1768 5 64 805 multi-exon FALSE canonical 48 3809 171 425.336337502 51 0 0 FALSE 0 0 NA A coding 183 549 109 657 30 PB.4934.1 chr7 + 2664 1 intergenic novelGene_2026 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 16 NA FALSE 0 0 NA A coding 101 303 1749 2051 95 PB.6102.1 chr9 - 3176 1 genic_intron novelGene_2066 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.1550.1 chr2 + 1557 9 full-splice_match GMPPB rna8363 1438 9 -89 -30 multi-exon FALSE canonical 35 136 1175 66.6183157998 39 0 0 FALSE 0 0 NA A coding 360 1080 225 1304 25 PB.5632.1 chr8 - 1278 2 full-splice_match COMMD5 rna30437 1017 2 10 -271 multi-exon FALSE canonical 32 170 59 NA 4 0 0 FALSE 0 0 NA C coding 224 672 117 788 30 PB.11684.3 chr20 - 3122 1 intergenic novelGene_1329 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.5632.2 chr8 - 1373 2 full-splice_match COMMD5 rna30435 1439 2 59 7 multi-exon FALSE canonical 24 37 156 NA 3 0 0 FALSE 0 0 NA C coding 224 672 214 885 30 PB.9035.1 chr15 + 1902 14 full-splice_match FNBP1 rna49111 2498 14 22 574 multi-exon FALSE canonical 45 442 1463 429.522991236 14 0 0 FALSE 0 0 NA C coding 555 1665 234 1898 75 PB.9035.2 chr15 - 1564 2 genic_intron novelGene_195 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 1393 NA 2 2 0 FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8986.1 chr15 - 2746 4 novel_not_in_catalog LOC722009 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 22 116 63 46.5510472492 3 1 0 TRUE 0 0 NA A coding 111 333 178 510 25 PB.3486.1 chr5 + 4522 1 full-splice_match LOC696878 rna18919 4548 1 17 9 mono-exon FALSE canonical NA NA NA NA 13 10 NA FALSE 0 0 NA A coding 617 1851 63 1913 75 PB.9850.5 chr16 - 2644 1 novel_in_catalog GHDC novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA C coding 224 672 1606 2277 90 PB.9173.2 chr15 + 3493 5 full-splice_match LPAR1 rna49787 3184 5 211 -520 multi-exon FALSE canonical 11 21 68 174.373163073 2 3 0 FALSE 0 0 NA C coding 364 1092 250 1341 10 PB.9173.1 chr15 + 3765 5 full-splice_match LPAR1 rna49785 3294 5 50 -521 multi-exon FALSE canonical 5 6 339 180.341343014 2 2 0 FALSE 0 0 NA C coding 364 1092 521 1612 10 PB.6843.2 chr11 + 3075 2 antisense novelGene_BCAT1_AS novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 26 NA 2 0 0 FALSE 0 0 NA B non_coding NA NA NA NA 70 PB.121.1 chr1 - 1326 7 full-splice_match AKR7A2 rna671 1290 7 15 -51 multi-exon FALSE canonical 37 654 293 625.151981521 3 0 0 FALSE 0 0 NA A coding 330 990 83 1072 25 PB.8693.2 chr14 - 1365 8 full-splice_match RAB6A rna47248 3228 8 -14 1877 multi-exon FALSE canonical 47 483 599 689.768076965 132 1 0 FALSE 0 0 NA C coding 208 624 417 1040 30 PB.6843.1 chr11 + 3527 2 antisense novelGene_BCAT1_AS novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 30 NA 2 3 0 FALSE 0 0 NA B non_coding NA NA NA NA 45 PB.6804.1 chr11 - 3195 1 antisense novelGene_ETV6_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA A coding 113 339 349 687 90 PB.1852.3 chr2 - 2669 22 full-splice_match ARMC8 rna9897 4794 22 276 1849 multi-exon FALSE canonical 41 542 1655 313.10221973 8 1 0 FALSE 0 0 NA C coding 673 2019 27 2045 35 PB.8454.5 chr14 - 2268 6 novel_in_catalog LOC693992 novel NA NA NA NA combination_of_known_junctions FALSE canonical 21 68 65 227.938588221 3 1 0 FALSE 0 0 NA B coding 242 726 81 806 20 PB.4289.1 chr6 - 2869 1 genic_intron novelGene_2387 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.9520.1 chr16 + 2723 1 full-splice_match KCTD11 rna51718 2423 1 -302 2 mono-exon FALSE canonical NA NA NA NA 38 3 NA FALSE 0 0 NA A coding 221 663 782 1444 30 PB.3686.2 chr5 - 6785 8 full-splice_match SETD7 rna20086 7003 8 213 5 multi-exon FALSE canonical 45 1252 716 334.12572484 6 30 0 FALSE 0 0 NA C coding 366 1098 73 1170 15 PB.12061.1 chrX + 5689 7 full-splice_match XIAP rna64985 2592 7 136 -3233 multi-exon FALSE canonical 46 243 181 337.628494058 6 2 0 FALSE 0 0 NA C coding 497 1491 214 1704 80 PB.9582.1 chr16 - 1451 11 novel_in_catalog COPS3 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 12 21 822 772.173555621 3 0 0 FALSE 0 0 NA C coding 365 1095 61 1155 20 PB.3146.1 chr4 - 3606 1 genic_intron novelGene_2046 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.7003.1 chr11 + 1355 1 antisense novelGene_SARNP_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.3336.1 chr5 + 3220 8 full-splice_match WFS1 rna18188 3638 8 34 384 multi-exon FALSE canonical 7 9 129 122.825078872 43 1 0 FALSE 0 0 NA A coding 890 2670 131 2800 25 PB.1605.1 chr2 - 1542 2 novel_not_in_catalog CCR3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 5 5 103 NA 10 0 0 FALSE 0 0 NA A coding 355 1065 115 1179 50 PB.5351.9 chr8 + 3190 1 genic_intron novelGene_1106 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 16 0 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.5351.8 chr8 + 5922 2 genic_intron novelGene_1106 novel NA NA NA NA no_subcategory TRUE canonical 0 0 904 NA 2 5 1 FALSE 0 0 NA B coding 104 312 930 1241 90 PB.1024.1 chr1 - 2076 5 full-splice_match RGS18 rna5645 3482 5 65 1341 multi-exon FALSE canonical 35 1250 568 285.361174654 21 0 0 FALSE 0 0 NA A coding 235 705 119 823 20 PB.2731.1 chr4 + 1579 8 full-splice_match NOL7 rna14716 811 8 9 -777 multi-exon FALSE canonical 48 999 274 456.004385944 9 0 0 FALSE 0 0 NA A coding 241 723 60 782 30 PB.5351.1 chr8 + 2607 1 novel_in_catalog LYN novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA B non_coding NA NA NA NA 85 PB.12017.1 chrX + 3251 1 novel_in_catalog TBC1D8B novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.5351.2 chr8 + 2687 11 incomplete-splice_match LYN rna29072 3366 13 345 334 internal_fragment FALSE canonical 41 520 1072 103.730419839 2 3 0 FALSE 0 0 NA B coding 423 1269 136 1404 35 PB.10482.2 chr18 + 2956 1 genic_intron novelGene_993 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.8488.1 chr14 + 3577 1 full-splice_match APLNR rna45861 1143 1 -172 -2262 mono-exon FALSE canonical NA NA NA NA 13 2 NA FALSE 0 0 NA A coding 380 1140 173 1312 25 PB.296.2 chr1 - 2706 5 novel_not_in_catalog C1H1orf109 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 14 21 552 130.307329034 5 2 0 FALSE 0 0 NA A coding 203 609 559 1167 40 PB.10694.1 chr19 - 1100 11 full-splice_match EIF3G rna57752 1156 11 0 56 multi-exon FALSE canonical 48 1218 987 1897.68622275 2 1 0 FALSE 0 0 NA A coding 320 960 41 1000 5 PB.1596.1 chr2 + 1461 1 genic_intron novelGene_1759 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 5 NA FALSE 0 0 NA A coding 103 309 825 1133 70 PB.4801.1 chr7 - 3518 26 full-splice_match SUPT16H rna25942 4680 26 227 935 multi-exon FALSE canonical 47 1089 1152 409.981706909 44 0 0 FALSE 0 0 NA C coding 1047 3141 107 3247 5 PB.11603.3 chr20 - 2953 8 novel_in_catalog SMPD3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 8 19 139 14.3527000944 2 15 0 FALSE 0 0 NA B coding 655 1965 353 2317 80 PB.11603.2 chr20 - 1994 1 incomplete-splice_match SMPD3 rna62616 5502 9 3504 5 mono-exon FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA B coding 103 309 437 745 15 PB.8748.2 chr14 - 3360 1 full-splice_match CREBZF rna47492 3089 1 -27 -244 mono-exon FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A coding 352 1056 254 1309 35 PB.1712.2 chr2 - 2813 12 full-splice_match TTC14 rna9159 2883 12 62 8 multi-exon FALSE canonical 44 209 1499 585.234141178 6 1 0 FALSE 0 0 NA C coding 771 2313 100 2412 40 PB.9776.1 chr16 - 4264 6 full-splice_match NFE2L1 rna52999 4774 6 -23 533 multi-exon FALSE canonical 35 273 135 985.233474868 6 4 0 FALSE 0 0 NA C coding 772 2316 650 2965 25 PB.9776.2 chr16 - 3591 4 novel_not_in_catalog NFE2L1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 253 1204.65430726 2 2 0 FALSE 0 0 NA C coding 455 1365 392 1756 25 PB.9776.3 chr16 - 4129 5 novel_in_catalog NFE2L1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 273 99 994.228846896 4 6 0 FALSE 0 0 NA C coding 742 2226 614 2839 20 PB.9776.4 chr16 - 4717 6 full-splice_match NFE2L1 rna52998 4850 6 126 7 multi-exon FALSE canonical 32 488 1290 886.098752962 4 1 0 FALSE 0 0 NA C coding 772 2316 568 2883 25 PB.3578.4 chr5 + 6118 9 novel_in_catalog HERC5 novel NA NA NA NA combination_of_known_junctions FALSE canonical 36 540 3987 126.842421926 2 19 0 FALSE 0 0 NA C coding 349 1047 3553 4599 45 PB.3979.1 chr6 + 3155 20 full-splice_match HMGCR rna21653 4514 20 39 1320 multi-exon FALSE canonical 40 441 735 163.670400501 72 0 0 FALSE 0 0 NA A coding 888 2664 73 2736 25 PB.5921.4 chr9 + 1678 1 genic_intron novelGene_1646 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.5921.2 chr9 + 3689 10 full-splice_match PCGF5 rna32299 7161 10 193 3279 multi-exon FALSE canonical 31 126 70 525.129507836 4 0 0 FALSE 0 0 NA C coding 256 768 254 1021 35 PB.5921.3 chr9 + 1609 5 novel_in_catalog PCGF5 novel NA NA NA NA combination_of_known_junctions FALSE canonical 31 126 54 574.915645986 2 5 0 FALSE 0 0 NA C coding 127 381 238 618 85 PB.5921.1 chr9 + 1848 7 novel_in_catalog PCGF5 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 298 89 545.401686833 2 1 0 FALSE 0 0 NA C coding 193 579 273 851 85 PB.3578.3 chr5 + 3249 21 novel_in_catalog HERC5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 3 3 1876 242.472678873 2 4 0 FALSE 0 0 NA C coding 948 2844 143 2986 50 PB.1114.1 chr1 + 2565 2 antisense novelGene_RCSD1_AS novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 1509 NA 9 0 0 FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.7564.1 chr12 - 684 5 full-splice_match ATP5G3 rna40810 918 5 -21 255 multi-exon FALSE canonical 44 4256 46 2026.28897248 11 0 0 FALSE 0 0 NA C coding 141 423 120 542 15 PB.3499.1 chr5 - 2105 8 full-splice_match CCNG2 rna18944 5748 8 354 3289 multi-exon FALSE canonical 44 370 297 376.46248153 17 1 0 FALSE 0 0 NA C coding 344 1032 298 1329 15 PB.3499.2 chr5 - 2918 6 novel_in_catalog CCNG2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 370 297 390.727526545 3 2 0 FALSE 0 0 NA C coding 242 726 298 1023 70 PB.3499.3 chr5 - 3473 4 novel_in_catalog CCNG2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 370 262 447.924100714 2 27 0 FALSE 0 0 NA C coding 186 558 263 820 60 PB.6616.2 chr10 - 1790 1 genic_intron novelGene_1585 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA A coding 52 156 242 397 90 PB.3578.1 chr5 + 2873 22 incomplete-splice_match HERC5 rna19397 3523 23 150 500 3prime_fragment FALSE canonical 26 91 296 194.707472892 7 0 0 FALSE 0 0 NA C coding 947 2841 32 2872 60 PB.9163.1 chr15 - 1739 3 novel_not_in_catalog LOC106993640 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 20 42 335 78 4 2 0 FALSE 0 0 NA B non_coding NA NA NA NA 10 PB.9163.2 chr15 - 2524 2 novel_in_catalog LOC106993640 novel NA NA NA NA combination_of_known_junctions FALSE canonical 29 198 1963 NA 25 2 0 FALSE 0 0 NA B non_coding NA NA NA NA 65 PB.6050.1 chr9 - 1955 1 genic_intron novelGene_1910 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.1828.6 chr2 + 2722 2 genic_intron novelGene_2424 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 2107 NA 2 3 0 FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.10571.1 chr19 + 5952 1 antisense novelGene_BTBD2_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.1828.4 chr2 + 1625 1 genic_intron novelGene_2422 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.9794.1 chr16 + 1842 10 novel_in_catalog AATF novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 338 243 178.499299719 2 2 0 FALSE 0 0 NA A coding 518 1554 153 1706 15 PB.1828.1 chr2 + 1559 9 novel_in_catalog SLC9A9 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 615 785 143.927064863 4 1 0 FALSE 0 0 NA A coding 377 1131 137 1267 60 PB.1469.1 chr2 + 1332 8 full-splice_match PSMD6 rna7862 1274 8 -28 -30 multi-exon FALSE canonical 48 1044 198 768.134753803 13 1 0 FALSE 0 0 NA A coding 389 1167 54 1220 20 PB.1731.1 chr2 - 2676 2 genic_intron novelGene_2074 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 734 NA 2 0 0 FALSE 0 0 NA A coding 132 396 775 1170 85 PB.11776.2 chrX + 3554 1 genic_intron novelGene_143 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.657.1 chr1 - 2039 10 full-splice_match HMGCS2 rna3540 2265 10 220 6 multi-exon FALSE canonical 16 3878 735 1195.6111408 8 0 0 FALSE 0 0 NA A coding 508 1524 51 1574 25 PB.11776.1 chrX + 3551 10 novel_not_in_catalog STS novel NA NA NA NA any annotated donor/acceptor TRUE canonical 10 17 141 44.3846820423 7 0 0 FALSE 0 0 NA A coding 578 1734 146 1879 80 PB.5276.1 chr8 - 2969 1 incomplete-splice_match KIF13B rna28677 8706 39 5731 7 mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 20 PB.10077.1 chr16 - 1461 5 full-splice_match CBX8 rna54483 4084 5 352 2271 multi-exon FALSE canonical 33 77 293 34 4 0 0 FALSE 0 0 NA A coding 385 1155 48 1202 30 PB.6735.1 chr11 + 2090 10 full-splice_match LTBR rna36667 2224 10 124 10 multi-exon FALSE canonical 14 29 254 182.433549546 21 3 0 FALSE 0 0 NA C coding 434 1302 162 1463 30 PB.1328.3 chr2 + 2656 1 genic_intron novelGene_919 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.1290.1 chr2 + 3079 1 genic ATP6V1A novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 21 NA FALSE 0 0 NA A non_coding NA NA NA NA 45 PB.11737.1 chr20 + 3727 4 fusion TRAPPC2L_LOC106995122 novel NA NA NA NA no_subcategory FALSE canonical 0 0 289 395.752447876 2 5 0 FALSE 0 0 NA A coding 314 942 86 1027 25 PB.4218.1 chr6 - 2608 20 full-splice_match FCHSD1 rna22812 2658 20 46 4 multi-exon FALSE canonical 24 46 1969 63.1030902571 17 0 0 FALSE 0 0 NA A coding 688 2064 25 2088 10 PB.11850.1 chrX + 1942 6 full-splice_match KRBOX4 rna63745 1327 6 62 -677 multi-exon FALSE canonical 39 210 476 133.364163102 3 0 0 FALSE 0 0 NA A coding 150 450 239 688 30 PB.5585.2 chr8 + 5428 23 full-splice_match DENND3 rna30155 5461 23 20 13 multi-exon FALSE canonical 29 150 1428 109.904504002 104 4 0 FALSE 0 0 NA C coding 1220 3660 257 3916 35 PB.5585.3 chr8 + 7437 21 novel_in_catalog DENND3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 29 150 1450 110.363037291 2 38 0 FALSE 0 0 NA C coding 1107 3321 279 3599 40 PB.11627.1 chr20 + 3991 25 full-splice_match FUK rna62695 4142 25 147 4 multi-exon FALSE canonical 5 5 1919 58.7026404858 2 1 0 FALSE 0 0 NA A coding 1084 3252 143 3394 30 PB.6309.5 chr10 - 3422 1 genic_intron novelGene_695 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 50 PB.9417.4 chr15 + 1761 3 novel_in_catalog SYK novel NA NA NA NA combination_of_known_junctions FALSE canonical 24 125 73 426.499706917 15 1 0 FALSE 0 0 NA C coding 193 579 115 693 75 PB.11335.2 chr20 - 2801 13 novel_not_in_catalog TXNDC11 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 44 243.213897629 2 1 0 TRUE 0 0 NA A coding 759 2277 417 2693 45 PB.9712.2 chr16 - 2695 13 novel_not_in_catalog EPX novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1239 63.1901891119 3 1 0 FALSE 0 0 NA C coding 709 2127 120 2246 5 PB.5585.9 chr8 + 5530 4 novel_in_catalog DENND3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 207 3678 56.7450438364 2 5 0 FALSE 0 0 NA C coding 146 438 3577 4014 40 PB.5172.460 chr7 + 1603 9 fusion LOC708891_LOC721089 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 365 3611.79539841 2 5 0 TRUE 0 0 NA B coding 464 1392 78 1469 15 PB.9712.1 chr16 - 2714 13 full-splice_match EPX rna52686 2716 13 -1 3 multi-exon FALSE canonical 6 49 1240 55.6686626389 44 1 0 FALSE 0 0 NA C coding 715 2145 121 2265 5 PB.5172.466 chr7 + 1508 8 fusion LOC720839_LOC721089 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 396 2820.2070846 2 13 0 TRUE 0 0 NA B coding 114 342 77 418 20 PB.3491.1 chr5 - 1374 13 full-splice_match ANXA3 rna18933 1434 13 11 49 multi-exon FALSE canonical 41 1290 519 259.150535404 16 0 0 FALSE 0 0 NA A coding 323 969 117 1085 60 PB.4893.1 chr7 - 1582 14 incomplete-splice_match NEMF rna26502 4640 33 47 3011 internal_fragment TRUE canonical 43 633 778 194.370779697 10 0 0 FALSE 0 0 NA A coding 436 1308 273 1580 75 PB.5172.465 chr7 + 1575 10 novel_not_in_catalog LOC721089 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 262 2062.85918085 3 15 0 TRUE 0 0 NA B coding 196 588 855 1442 15 PB.5948.1 chr9 + 3773 10 full-splice_match ENTPD1 rna32441 5326 10 1228 325 multi-exon FALSE canonical 38 131 105 127.765410029 17 4 0 FALSE 0 0 NA A coding 510 1530 90 1619 30 PB.1712.1 chr2 - 2750 12 novel_not_in_catalog TTC14 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 1430 621.573808972 2 16 0 FALSE 0 0 NA C coding 761 2283 61 2343 20 PB.2990.4 chr4 - 1753 1 incomplete-splice_match ELOVL5 rna16301 3034 8 1273 9 mono-exon FALSE canonical NA NA NA NA 6 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 10 PB.7326.1 chr11 - 1610 1 genic SPPL3 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.12087.1 chrX + 3945 5 full-splice_match ZNF449 rna65199 3983 5 25 13 multi-exon FALSE canonical 30 72 494 17.7200451467 3 7 0 FALSE 0 0 NA A coding 518 1554 141 1694 10 PB.753.4 chr1 - 3067 13 full-splice_match SHC1 rna4115 3140 13 69 4 multi-exon FALSE canonical 34 188 162 363.078503908 115 0 0 FALSE 0 0 NA C coding 474 1422 166 1587 15 PB.1242.1 chr2 - 4082 12 full-splice_match TOMM70A rna6777 4410 12 341 -13 multi-exon FALSE canonical 46 835 460 401.981342851 10 2 0 FALSE 0 0 NA A coding 608 1824 137 1960 25 PB.4429.1 chr7 - 2778 1 genic_intron novelGene_375 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.6729.1 chr11 - 5952 33 incomplete-splice_match VWF rna36655 8597 52 2643 2 5prime_fragment FALSE canonical 20 174 4282 403.915832817 3 2 0 FALSE 0 0 NA A coding 1930 5790 31 5820 20 PB.4806.46 chr7 + 3116 1 genic_intron novelGene_1603 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 10 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.2990.2 chr4 - 1487 8 full-splice_match ELOVL5 rna16299 3572 8 788 1297 multi-exon FALSE canonical 43 356 142 400.454741513 400 2 0 FALSE 0 0 NA C coding 299 897 151 1047 40 PB.7249.1 chr11 - 2451 11 full-splice_match ANAPC7 rna39300 2531 11 24 56 multi-exon FALSE canonical 44 495 194 487.168348726 2 0 0 FALSE 0 0 NA A coding 565 1695 94 1788 15 PB.8681.1 chr14 - 4075 31 novel_in_catalog PDE2A novel NA NA NA NA combination_of_known_junctions FALSE canonical 11 28 100 151.390224255 2 2 0 FALSE 0 0 NA A coding 920 2760 82 2841 15 PB.4204.2 chr6 + 2961 1 novel_in_catalog HARS2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA C coding 109 327 1585 1911 20 PB.9417.5 chr15 + 2676 14 novel_not_in_catalog SYK novel NA NA NA NA any annotated donor/acceptor FALSE canonical 14 23 1081 394.312059161 2 2 0 FALSE 0 0 NA C coding 293 879 1193 2071 80 PB.6969.1 chr11 + 1394 7 full-splice_match LOC700569 rna37950 1465 7 58 13 multi-exon FALSE canonical 34 725 867 137.931142241 43 0 0 FALSE 0 0 NA A coding 430 1290 46 1335 15 PB.11782.1 chrX + 1077 7 full-splice_match LOC709878 rna63292 2343 7 58 1208 multi-exon FALSE canonical 31 93 162 289.579004764 2 0 0 FALSE 0 0 NA A coding 237 711 298 1008 35 PB.3471.1 chr5 - 1631 10 full-splice_match COPS4 rna18836 1774 10 112 31 multi-exon FALSE canonical 46 1492 768 232.165888967 39 0 0 FALSE 0 0 NA A coding 406 1218 54 1271 45 PB.9695.1 chr16 - 3848 5 full-splice_match LOC715706 rna52566 5299 5 211 1240 multi-exon FALSE canonical 33 409 41 62.0805927807 14 0 0 FALSE 0 0 NA A coding 897 2691 55 2745 70 PB.4914.1 chr7 + 2461 2 full-splice_match PTGER2 rna26574 2476 2 10 5 multi-exon FALSE canonical 12 36 1084 NA 4 4 0 FALSE 0 0 NA A coding 358 1074 242 1315 45 PB.5793.1 chr9 - 1660 6 full-splice_match FAM213A rna31552 1173 6 54 -541 multi-exon FALSE canonical 39 650 120 849.905288841 13 5 0 FALSE 0 0 NA C coding 229 687 123 809 35 PB.3132.1 chr4 + 3446 9 novel_not_in_catalog NUP43 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 3 1067 84.9529281426 2 6 0 TRUE 0 0 NA A coding 400 1200 26 1225 30 PB.5896.2 chr9 + 3451 1 genic_intron novelGene_1593 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.8041.2 chr13 + 1447 10 full-splice_match MDH1 rna43604 1467 10 16 4 multi-exon FALSE canonical 29 129 79 4668.02517131 2 0 0 FALSE 0 0 NA C coding 353 1059 181 1239 30 PB.831.1 chr1 + 2725 1 genic LY9 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A coding 124 372 914 1285 75 PB.10543.3 chr19 + 2803 4 novel_in_catalog MISP novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 0 0 2025 28.8963665536 10 3 0 FALSE 0 0 NA C coding 666 1998 115 2112 5 PB.10543.2 chr19 + 2810 5 full-splice_match MISP rna57089 3445 5 626 9 multi-exon FALSE canonical 7 17 37 21.2602916255 66 1 0 FALSE 0 0 NA C coding 679 2037 95 2131 5 PB.10543.1 chr19 + 2868 5 full-splice_match MISP rna57088 2888 5 13 7 multi-exon FALSE canonical 4 7 93 25.5734237051 78 1 0 FALSE 0 0 NA C coding 679 2037 151 2187 0 PB.8796.1 chr14 - 2953 10 full-splice_match CASP5 rna47784 3826 10 703 170 multi-exon FALSE canonical 14 38 1310 30.3644529014 14 1 0 FALSE 0 0 NA A coding 459 1377 30 1406 40 PB.943.11 chr1 + 3086 8 incomplete-splice_match PIGR rna5161 4257 11 1165 6 internal_fragment FALSE canonical 9 304 68 161.641578809 42 4 0 FALSE 0 0 NA C coding 82 246 1070 1315 30 PB.7518.1 chr12 - 3577 26 full-splice_match DPP4 rna40562 3596 26 12 7 multi-exon FALSE canonical 29 321 252 329.016716901 26 1 0 FALSE 0 0 NA A coding 766 2298 247 2544 30 PB.7494.1 chr12 - 3257 4 full-splice_match RBM43 rna40374 5129 4 506 1366 multi-exon FALSE canonical 27 71 168 101.469207152 2 2 0 FALSE 0 0 NA A coding 353 1059 166 1224 75 PB.9417.6 chr15 + 1866 9 novel_in_catalog SYK novel NA NA NA NA combination_of_known_junctions FALSE canonical 24 125 78 339.617431826 6 2 0 FALSE 0 0 NA C coding 394 1182 120 1301 70 PB.11295.1 chr20 - 2129 7 full-splice_match TFAP4 rna61292 2279 7 145 5 multi-exon FALSE canonical 11 14 899 121.498971189 5 2 0 FALSE 0 0 NA A coding 338 1014 234 1247 15 PB.10940.2 chr19 - 1567 8 novel_in_catalog ECH1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 42 431 663 337.841678897 2 0 0 FALSE 0 0 NA C coding 236 708 29 736 30 PB.10142.1 chr17 - 3021 1 intergenic novelGene_91 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA A coding 185 555 2426 2980 85 PB.11704.1 chr20 - 2576 6 incomplete-splice_match ZDHHC7 rna62979 3041 8 458 7 5prime_fragment FALSE canonical 48 515 307 252.378683727 2 0 0 FALSE 0 0 NA A coding 208 624 71 694 30 PB.757.3 chr1 + 2926 23 novel_not_in_catalog ADAM15 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 4 5 2484 291.652190117 9 2 0 FALSE 0 0 NA C coding 855 2565 85 2649 10 PB.5757.1 chr9 + 4056 8 full-splice_match CSGALNACT2 rna31211 3534 8 6 -528 multi-exon FALSE canonical 37 274 112 294.202311344 3 3 0 FALSE 0 0 NA C coding 542 1626 376 2001 55 PB.832.2 chr1 - 2980 6 novel_in_catalog ITLN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 37 1057 521 65.5133574166 6 3 0 FALSE 0 0 NA C coding 235 705 117 821 85 PB.4776.2 chr7 + 3800 1 genic_intron novelGene_1553 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.6076.1 chr9 + 2778 4 incomplete-splice_match INPP5F rna33138 3696 6 896 22 internal_fragment FALSE canonical 43 659 203 86.9942526837 2 3 0 FALSE 0 0 NA B coding 442 1326 116 1441 35 PB.634.1 chr1 + 2739 1 genic_intron novelGene_1997 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 40 PB.11611.1 chr20 + 2182 17 full-splice_match UTP4 rna62650 2277 17 90 5 multi-exon FALSE canonical 25 53 37 98.4377976186 4 1 0 FALSE 0 0 NA A coding 686 2058 40 2097 40 PB.3483.1 chr5 + 3430 3 full-splice_match BMP3 rna18902 6262 3 297 2535 multi-exon FALSE canonical 10 48 848 31 10 1 0 FALSE 0 0 NA C coding 474 1422 527 1948 25 PB.7966.1 chr13 - 1257 10 full-splice_match HAAO rna43244 1282 10 23 2 multi-exon FALSE canonical 25 303 746 437.86299227 2 0 0 FALSE 0 0 NA A coding 300 900 6 905 10 PB.1165.1 chr1 - 2636 1 genic TOMM20 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.11289.1 chr20 - 3163 6 full-splice_match ZNF213 rna61239 3164 6 -6 7 multi-exon FALSE canonical 12 20 319 23.4946802489 6 3 0 FALSE 0 0 NA C coding 459 1377 435 1811 10 PB.1286.1 chr2 - 3345 18 full-splice_match SPICE1 rna7002 5288 18 0 1943 multi-exon FALSE canonical 36 245 490 105.531985673 2 0 0 FALSE 0 0 NA C coding 856 2568 106 2673 45 PB.1286.2 chr2 - 1823 1 genic_intron novelGene_774 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.11289.2 chr20 - 3068 5 novel_in_catalog ZNF213 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 8 8 935 23.9582971014 4 3 0 FALSE 0 0 NA C coding 301 903 813 1715 10 PB.4292.8 chr6 - 1710 2 novel_in_catalog ADAM19 novel NA NA NA NA combination_of_known_junctions FALSE canonical 28 107 176 NA 2 2 0 FALSE 0 0 NA C coding 120 360 83 442 90 PB.4292.9 chr6 - 6152 1 novel_in_catalog ADAM19 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA C coding 196 588 83 670 80 PB.6513.12 chr10 - 1941 10 novel_in_catalog AP1B1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 532 1324 253.517257795 2 2 0 FALSE 0 0 NA C coding 484 1452 170 1621 80 PB.6513.13 chr10 - 2870 2 novel_in_catalog AP1B1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 45 782 147 NA 2 3 0 FALSE 0 0 NA C coding 113 339 2047 2385 85 PB.2033.1 chr3 - 3880 2 full-splice_match ZBTB21 rna10904 7482 2 83 3519 multi-exon FALSE canonical 30 97 97 NA 2 4 0 FALSE 0 0 NA A coding 1066 3198 111 3308 20 PB.3483.2 chr5 + 3956 1 genic BMP3 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA C non_coding NA NA NA NA 20 PB.4292.1 chr6 - 3218 1 incomplete-splice_match ADAM19 rna23161 6500 23 3273 10 mono-exon FALSE canonical NA NA NA NA 12 6 NA FALSE 0 0 NA C coding 118 354 2803 3156 15 PB.4292.2 chr6 - 6455 23 full-splice_match ADAM19 rna23161 6500 23 42 3 multi-exon FALSE canonical 20 47 2632 130.456889431 45 4 0 FALSE 0 0 NA C coding 918 2754 83 2836 15 PB.11810.5 chrX - 1462 11 incomplete-splice_match SH3KBP1 rna63455 4728 18 -53 3319 internal_fragment FALSE canonical 33 214 349 264.22149799 4 0 0 FALSE 0 0 NA C coding 372 1116 346 1461 65 PB.11810.4 chrX - 3005 19 novel_not_in_catalog SH3KBP1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 20 277.549995496 5 1 0 TRUE 0 0 NA C coding 665 1995 314 2308 75 PB.10436.1 chr18 + 1873 12 novel_not_in_catalog GALNT1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 17 36 85 668.05164471 2 1 0 TRUE 0 0 NA A coding 559 1677 186 1862 70 PB.11810.1 chrX - 1967 12 novel_in_catalog SH3KBP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 394 574 196.685027392 10 0 0 FALSE 0 0 NA C coding 404 1212 60 1271 70 PB.11810.3 chrX - 2669 17 full-splice_match SH3KBP1 rna63458 4536 17 122 1745 multi-exon FALSE canonical 30 147 140 245.709177688 71 1 0 FALSE 0 0 NA C coding 628 1884 90 1973 70 PB.5087.2 chr7 + 1503 1 intergenic novelGene_2379 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 8 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 30 PB.9993.4 chr16 - 2043 1 genic_intron novelGene_1319 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.5876.1 chr9 - 3004 1 genic_intron novelGene_1438 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.9455.1 chr16 + 5641 21 novel_in_catalog SGSM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 18 37 914 225.028887035 2 4 0 FALSE 0 0 NA A coding 547 1641 444 2084 20 PB.9621.1 chr16 + 1641 6 full-splice_match TMEM199 rna52280 1702 6 58 3 multi-exon FALSE canonical 44 265 545 241.333793738 10 2 0 FALSE 0 0 NA C coding 208 624 15 638 25 PB.2953.1 chr4 + 1951 5 novel_in_catalog ABCC10 novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 89 1246 60.8194047981 3 1 0 FALSE 0 0 NA B coding 470 1410 208 1617 10 PB.9621.3 chr16 + 1450 6 full-splice_match TMEM199 rna52281 1530 6 54 26 multi-exon FALSE canonical 36 120 545 294.265186524 2 4 0 FALSE 0 0 NA C coding 203 609 15 623 20 PB.9621.2 chr16 + 1530 5 novel_in_catalog TMEM199 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 8 8 440 375.817774992 2 3 0 FALSE 0 0 NA C coding 154 462 23 484 20 PB.6028.1 chr9 - 2554 4 full-splice_match CALHM2 rna32824 2717 4 156 7 multi-exon FALSE canonical 5 6 253 31.7962261912 2 3 0 FALSE 0 0 NA A coding 323 969 1232 2200 30 PB.5955.1 chr9 + 4791 8 full-splice_match LOC705646 rna32484 10373 8 31 5551 multi-exon FALSE canonical 44 236 178 212.891991395 2 4 0 FALSE 0 0 NA A coding 433 1299 508 1806 70 PB.5107.1 chr7 - 2153 6 incomplete-splice_match CLMN rna27632 2966 11 505 308 internal_fragment TRUE canonical 25 256 490 90.7248587764 2 1 0 FALSE 0 0 NA A coding 615 1845 308 2152 45 PB.9977.5 chr16 + 1667 9 novel_not_in_catalog BPTF novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 834 733.747231681 2 10 0 TRUE 0 0 NA B coding 255 765 90 854 80 PB.9977.4 chr16 + 1526 7 novel_in_catalog BPTF novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 22 80 810 651.758390817 2 0 0 FALSE 0 0 NA B coding 479 1437 90 1526 75 PB.10912.1 chr19 - 1771 5 full-splice_match ZNF565 rna58882 1887 5 52 64 multi-exon FALSE canonical 34 117 34 39.1918358845 2 2 0 FALSE 0 0 NA A coding 497 1491 100 1590 20 PB.9601.2 chr16 + 2868 7 full-splice_match MAPK7 rna52175 3122 7 244 10 multi-exon FALSE canonical 7 7 109 24.6981780705 12 1 0 FALSE 0 0 NA C coding 816 2448 115 2562 15 PB.9601.1 chr16 + 2877 7 novel_not_in_catalog MAPK7 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 123 26.4007575649 2 1 0 FALSE 0 0 NA C coding 816 2448 129 2576 15 PB.705.1 chr1 - 2116 11 full-splice_match CERS2 rna3786 2061 11 -26 -29 multi-exon FALSE canonical 44 606 107 517.513284854 9 4 0 FALSE 0 0 NA A coding 380 1140 109 1248 75 PB.8694.2 chr14 + 1932 8 novel_in_catalog PAAF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 38 231 65 114.214710086 2 3 0 FALSE 0 0 NA C coding 283 849 19 867 70 PB.1539.2 chr2 + 1729 4 full-splice_match HYAL3 rna8296 1776 4 45 2 multi-exon FALSE canonical 19 98 40 65.482822175 10 2 0 FALSE 0 0 NA C coding 417 1251 58 1308 5 PB.8694.1 chr14 + 1574 12 full-splice_match PAAF1 rna47256 1561 12 -6 -7 multi-exon FALSE canonical 38 231 70 128.023435355 10 1 0 FALSE 0 0 NA C coding 392 1176 24 1199 50 PB.9117.1 chr15 - 3236 13 novel_in_catalog RABGAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 21 40 66 317.342086714 2 1 0 FALSE 0 0 NA A coding 406 1218 116 1333 80 PB.3271.5 chr4 - 1795 1 incomplete-splice_match TAGAP rna17764 4777 10 2456 527 mono-exon FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA C coding 223 669 297 965 45 PB.2943.1 chr4 + 3400 8 novel_not_in_catalog RPL7L1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1240 793.05611403 65 1 0 TRUE 0 0 NA A coding 246 738 10 747 70 PB.9441.2 chr16 - 4157 32 novel_not_in_catalog MYO1C novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 3074 215.918966281 30 14 0 FALSE 0 0 NA B coding 1040 3120 64 3183 60 PB.9441.5 chr16 - 4384 31 novel_not_in_catalog MYO1C novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 3138 216.589473428 2 24 0 FALSE 0 0 NA B coding 588 1764 51 1814 70 PB.9441.4 chr16 - 4153 32 novel_not_in_catalog MYO1C novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 3077 216.499422632 20 19 1 FALSE 0 0 NA B coding 1024 3072 115 3186 40 PB.9441.7 chr16 - 4367 32 novel_not_in_catalog MYO1C novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 3284 215.07208094 2 17 0 FALSE 0 0 NA B coding 1059 3177 217 3393 60 PB.3903.3 chr6 - 1527 9 full-splice_match EMB rna21318 1869 9 62 280 multi-exon FALSE canonical 37 348 297 290.714636714 13 0 0 FALSE 0 0 NA A coding 328 984 183 1166 45 PB.10079.1 chr16 + 3462 20 full-splice_match GAA rna54493 3539 20 75 2 multi-exon FALSE canonical 7 8 29 78.5811682275 55 5 0 FALSE 0 0 NA A coding 952 2856 59 2914 5 PB.3271.8 chr4 - 3023 9 novel_in_catalog TAGAP novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 0 0 316 123.895116934 2 0 0 FALSE 0 0 NA C coding 553 1659 536 2194 45 PB.7845.1 chr13 - 1650 13 full-splice_match PDIA6 rna42532 2333 13 34 649 multi-exon FALSE canonical 42 956 85 695.13380007 128 0 0 FALSE 0 0 NA A coding 440 1320 67 1386 15 PB.60.5 chr1 + 2676 2 novel_not_in_catalog CA6 novel NA NA NA NA not any annotated donor/acceptor TRUE canonical 0 0 806 NA 2 7 0 TRUE 0 0 NA C coding 102 306 744 1049 45 PB.826.1 chr1 - 1750 7 full-splice_match SLAMF1 rna4539 4035 7 274 2011 multi-exon FALSE canonical 25 333 511 118.406080925 19 1 0 FALSE 0 0 NA A coding 335 1005 97 1101 20 PB.60.3 chr1 + 1480 11 novel_not_in_catalog CA6 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 946 116.06032914 3 11 3 TRUE 0 0 NA C coding 292 876 96 971 45 PB.60.2 chr1 + 1673 10 full-splice_match CA6 rna327 1671 10 11 -13 multi-exon FALSE canonical 18 119 61 55.7045779088 38 0 0 FALSE 0 0 NA C coding 336 1008 94 1101 30 PB.60.1 chr1 + 1670 10 full-splice_match CA6 rna329 1678 10 -1 9 multi-exon FALSE canonical 16 128 62 53.7587202229 31 0 0 FALSE 0 0 NA C coding 336 1008 113 1120 45 PB.11612.1 chr20 + 2893 1 genic_intron novelGene_1099 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 35 PB.10858.1 chr19 + 3411 4 full-splice_match ZNF93 rna58510 3946 4 936 -401 multi-exon FALSE canonical 38 202 233 72.1664742107 7 2 0 FALSE 0 0 NA A coding 705 2115 104 2218 75 PB.11674.1 chr20 + 2877 1 genic_intron novelGene_1321 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 8 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 60 PB.7451.1 chr12 - 5726 1 intergenic novelGene_488 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA A coding 123 369 2214 2582 90 PB.11457.1 chr20 + 5442 1 antisense novelGene_LOC100429815_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 18 NA FALSE 0 0 NA A coding 132 396 1803 2198 80 PB.11094.1 chr19 - 1520 8 full-splice_match IRF3 rna59993 1328 8 -130 -62 multi-exon FALSE canonical 43 400 175 518.122572371 159 2 0 FALSE 0 0 NA A coding 422 1266 184 1449 15 PB.4920.1 chr7 - 3794 1 incomplete-splice_match CNIH1 rna26604 4755 6 955 7 mono-exon FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 20 PB.11726.3 chr20 + 3763 19 novel_not_in_catalog ZC3H18 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 922 159.474135834 3 6 0 FALSE 0 0 NA C coding 680 2040 1054 3093 5 PB.10955.1 chr19 - 1275 1 full-splice_match EID2B rna59177 808 1 -18 -449 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A coding 161 483 53 535 30 PB.11726.4 chr20 + 2826 5 novel_in_catalog ZC3H18 novel NA NA NA NA combination_of_known_junctions FALSE canonical 25 75 1863 52.8299157675 3 1 0 FALSE 0 0 NA C coding 286 858 1299 2156 5 PB.2886.2 chr4 - 2005 1 genic_intron novelGene_800 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 20 4 NA FALSE 0 0 NA B non_coding NA NA NA NA 15 PB.800.1 chr1 - 1535 6 full-splice_match CD5L rna4413 5266 6 164 3567 multi-exon FALSE canonical 15 748 128 649.976922667 4 0 0 FALSE 0 0 NA A coding 347 1041 74 1114 35 PB.2654.3 chr3 + 2572 12 novel_not_in_catalog GALNT11 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 503 833.942444057 2 1 0 TRUE 0 0 NA C coding 379 1137 796 1932 20 PB.9609.1 chr16 - 1489 1 incomplete-splice_match USP22 rna52217 5022 13 3529 5 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A coding 108 324 435 758 20 PB.2893.1 chr4 + 6355 11 novel_in_catalog BRPF3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 26 67 3855 58.5576638878 3 2 0 FALSE 0 0 NA B coding 639 1917 208 2124 10 PB.5172.592 chr7 + 1520 6 novel_not_in_catalog LOC711872 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1139 3717.04062394 9 21 2 TRUE 0 0 NA B coding 442 1326 74 1399 20 PB.603.1 chr1 - 2813 1 full-splice_match KCNA3 rna3281 3335 1 511 11 mono-exon FALSE canonical NA NA NA NA 8 1 NA FALSE 0 0 NA C coding 439 1317 111 1427 80 PB.2893.2 chr4 + 3671 8 incomplete-splice_match BRPF3 rna15813 5821 13 2143 7 internal_fragment FALSE canonical 26 67 1173 26.5894716006 3 1 0 FALSE 0 0 NA B coding 448 1344 166 1509 10 PB.818.1 chr1 - 1797 8 full-splice_match PEX19 rna4519 3689 8 24 1868 multi-exon FALSE canonical 41 796 783 320.59787897 25 0 0 FALSE 0 0 NA C coding 299 897 13 909 30 PB.3531.1 chr5 + 3464 8 novel_not_in_catalog SULT1B1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 3 3 43 46.076024134 4 1 0 TRUE 0 0 NA A coding 299 897 81 977 25 PB.818.2 chr1 - 3512 7 full-splice_match PEX19 rna4520 3564 7 2 50 multi-exon FALSE canonical 40 186 92 531.968044153 4 1 0 FALSE 0 0 NA C coding 209 627 183 809 40 PB.9417.3 chr15 + 2634 13 full-splice_match SYK rna51192 4280 13 153 1493 multi-exon FALSE canonical 24 83 941 399.998749998 14 0 0 FALSE 0 0 NA C coding 612 1836 96 1931 25 PB.10975.1 chr19 + 1448 4 novel_in_catalog CCDC97 novel NA NA NA NA combination_of_known_junctions FALSE canonical 30 44 523 30.347981811 5 0 0 FALSE 0 0 NA C coding 358 1074 22 1095 25 PB.10975.2 chr19 + 2522 5 full-splice_match CCDC97 rna59307 3615 5 432 661 multi-exon FALSE canonical 28 44 525 27.5862284483 2 1 0 FALSE 0 0 NA C coding 343 1029 24 1052 15 PB.5172.590 chr7 + 1595 5 novel_not_in_catalog LOC711872 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 3 4 111 3659.49368083 4 0 0 FALSE 0 0 NA B coding 375 1125 348 1472 35 PB.757.2 chr1 + 2965 23 novel_not_in_catalog ADAM15 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 2522 292.025683802 2 10 0 FALSE 0 0 NA C coding 827 2481 116 2596 15 PB.10949.1 chr19 - 1934 14 full-splice_match PAF1 rna59157 2067 14 124 9 multi-exon FALSE canonical 30 248 249 239.161033615 7 0 0 FALSE 0 0 NA A coding 531 1593 203 1795 10 PB.9615.1 chr16 + 1512 10 full-splice_match LGALS9 rna52255 1252 10 98 -358 multi-exon FALSE canonical 16 65 495 215.067431286 118 23 0 FALSE 0 0 NA C coding 323 969 16 984 70 PB.9615.2 chr16 + 1612 11 novel_not_in_catalog LGALS9 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 524 248.439127353 3 25 0 FALSE 0 0 NA C coding 332 996 54 1049 10 PB.3233.1 chr4 - 2921 2 full-splice_match FAM26E rna17610 1132 2 28 -1817 multi-exon FALSE canonical 21 134 569 NA 3 3 0 FALSE 0 0 NA A coding 309 927 30 956 25 PB.9615.4 chr16 + 1677 11 full-splice_match LGALS9 rna52256 1371 11 54 -360 multi-exon FALSE canonical 0 0 591 248.439127353 6 28 0 FALSE 0 0 NA C coding 355 1065 52 1116 15 PB.6614.1 chr10 + 3121 8 full-splice_match GRAP2 rna36046 1555 8 87 -1653 multi-exon FALSE canonical 26 132 864 223.20618271 27 0 0 FALSE 0 0 NA C coding 330 990 175 1164 60 PB.9615.6 chr16 + 3294 2 novel_not_in_catalog LGALS9 novel NA NA NA NA not any annotated donor/acceptor TRUE canonical 22 37 1417 NA 2 5 0 TRUE 0 0 NA C coding 110 330 34 363 80 PB.9086.1 chr15 - 1920 10 full-splice_match SLC2A8 rna49365 1908 10 -12 0 multi-exon FALSE canonical 0 0 281 95.5510334847 3 1 0 FALSE 0 0 NA A coding 477 1431 63 1493 30 PB.335.1 chr1 - 2559 1 genic_intron novelGene_885 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 19 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.2479.12 chr3 - 3088 22 novel_not_in_catalog SLC26A3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 348 7.48331477355 7 1 0 TRUE 0 0 NA C coding 758 2274 437 2710 15 PB.5172.225 chr7 + 1489 8 fusion LOC720839_LOC711872_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 212 2640.15170019 2 11 0 TRUE 0 0 NA B coding 127 381 78 458 20 PB.664.2 chr1 - 2913 8 novel_not_in_catalog TXNIP novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 894 5027.85660098 1326 7 0 TRUE 0 0 NA B coding 391 1173 320 1492 60 PB.7877.1 chr13 + 2808 2 novel_not_in_catalog EFR3B novel NA NA NA NA not any annotated donor/acceptor FALSE canonical 0 0 236 NA 2 12 1 TRUE 0 0 NA A non_coding NA NA NA NA 20 PB.5868.4 chr9 + 3807 26 novel_not_in_catalog HERC4 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 2151 388.99614394 2 3 0 TRUE 0 0 NA C coding 1056 3168 198 3365 25 PB.10350.1 chr17 - 3960 3 full-splice_match LIG4 rna55868 4007 3 40 7 multi-exon FALSE canonical 31 165 40 230 6 2 0 FALSE 0 0 NA A coding 911 2733 142 2874 40 PB.7183.2 chr11 - 2620 7 novel_in_catalog UHRF1BP1L novel NA NA NA NA combination_of_known_junctions FALSE canonical 45 561 577 242.303528658 3 3 0 FALSE 0 0 NA B coding 293 879 240 1118 95 PB.5191.2 chr8 - 2753 2 novel_in_catalog MTMR9 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 367 356 NA 2 19 0 FALSE 0 0 NA C non_coding NA NA NA NA 65 PB.7414.1 chr12 - 2930 1 novel_in_catalog TMEM177 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA C coding 311 933 1666 2598 0 PB.4391.1 chr7 - 1704 8 full-splice_match NIPA2 rna23706 2557 8 35 818 multi-exon FALSE canonical 32 94 245 336.544202149 10 0 0 FALSE 0 0 NA C coding 360 1080 590 1669 35 PB.6715.1 chr11 + 1796 1 intergenic novelGene_92 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5191.1 chr8 - 3460 10 full-splice_match MTMR9 rna28248 7090 10 315 3315 multi-exon FALSE canonical 39 239 1571 143.627991701 8 2 0 FALSE 0 0 NA C coding 549 1647 86 1732 80 PB.1577.2 chr2 + 1729 6 novel_in_catalog UQCRC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 37 189 84 2268.37474858 2 4 0 FALSE 0 0 NA C coding 237 711 16 726 90 PB.981.1 chr1 - 1557 8 full-splice_match TMEM183A rna5394 1674 8 -46 163 multi-exon FALSE canonical 43 486 198 571.445535462 73 0 0 FALSE 0 0 NA C coding 376 1128 90 1217 45 PB.801.1 chr1 - 3511 1 genic_intron novelGene_2213 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.5172.229 chr7 + 1917 8 fusion LOC711872_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 374 3151.56580131 2 14 0 TRUE 0 0 NA B coding 375 1125 671 1795 35 PB.8827.2 chr14 + 1683 1 genic_intron novelGene_1865 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.1604.4 chr2 - 2833 1 genic_intron novelGene_1768 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.10651.5 chr19 - 3272 1 genic DENND1C novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 6 2 NA FALSE 0 0 NA C coding 106 318 1755 2072 90 PB.1356.2 chr2 - 1671 3 novel_in_catalog MUC13 novel NA NA NA NA combination_of_known_junctions FALSE canonical 1 1 88 2 3 0 0 FALSE 0 0 NA C coding 204 612 37 648 85 PB.11433.1 chr20 - 2110 8 full-splice_match NFATC2IP rna61806 2395 8 279 6 multi-exon FALSE canonical 33 97 401 92.2117129219 2 0 0 FALSE 0 0 NA A coding 419 1257 15 1271 25 PB.8400.1 chr14 + 2872 20 full-splice_match PYGM rna45350 2863 20 -10 1 multi-exon FALSE canonical 17 5508 500 4409.14368103 13 0 0 FALSE 0 0 NA A coding 842 2526 77 2602 10 PB.1356.1 chr2 - 2801 12 full-splice_match MUC13 rna7237 3696 12 885 10 multi-exon FALSE canonical 1 1 1199 3.16227766017 117 0 0 FALSE 0 0 NA C coding 495 1485 37 1521 10 PB.4778.1 chr7 + 2995 19 novel_in_catalog LRRK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 20 32 2746 89.0168523371 5 3 0 FALSE 0 0 NA B coding 912 2736 251 2986 20 PB.5868.5 chr9 + 3292 1 genic_intron novelGene_1291 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.4778.3 chr7 + 6186 26 incomplete-splice_match LRRK1 rna25761 7657 34 1469 2 internal_fragment TRUE canonical 20 32 1393 61.0819122163 2 15 0 FALSE 0 0 NA B coding 1572 4716 197 4912 20 PB.5172.599 chr7 + 2665 7 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 14 20 33 3801.81259401 121 0 0 TRUE 0 0 NA B coding 265 795 444 1238 20 PB.4778.5 chr7 + 5587 1 novel_in_catalog LRRK1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 10 NA FALSE 0 0 NA B coding 112 336 4001 4336 80 PB.11594.2 chr20 - 3791 24 novel_not_in_catalog SLC12A4 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 3194 253.047426385 55 1 0 TRUE 0 0 NA A coding 1085 3255 27 3281 0 PB.5864.1 chr9 + 2897 3 antisense novelGene_LOC706431_AS novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 596 0 5 8 0 FALSE 0 0 NA A coding 126 378 1123 1500 95 PB.4726.1 chr7 - 2695 3 full-splice_match PEX11A rna25569 2762 3 59 8 multi-exon FALSE canonical 23 89 294 39.4968353163 2 10 0 FALSE 0 0 NA A coding 247 741 123 863 35 PB.10941.3 chr19 - 1880 13 full-splice_match HNRNPL rna59110 1931 13 32 19 multi-exon FALSE canonical 39 368 52 1645.38080699 12 1 0 FALSE 0 0 NA C coding 456 1368 185 1552 50 PB.10941.2 chr19 - 2068 13 full-splice_match HNRNPL rna59111 2115 13 33 14 multi-exon FALSE canonical 36 345 238 1649.18555657 14 0 0 FALSE 0 0 NA C coding 558 1674 65 1738 50 PB.10941.5 chr19 - 2615 1 novel_in_catalog HNRNPL novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.9311.3 chr15 + 1821 7 novel_not_in_catalog MLLT3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 12 52 91 216.709482949 2 1 0 FALSE 0 0 NA C coding 162 486 185 670 25 PB.10941.6 chr19 - 2561 6 novel_in_catalog HNRNPL novel NA NA NA NA combination_of_known_junctions FALSE canonical 36 345 233 1648.23724021 3 1 0 FALSE 0 0 NA C coding 280 840 60 899 65 PB.4385.1 chr6 + 2858 6 novel_not_in_catalog BTNL3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 170 58.2752091373 5 4 0 TRUE 0 0 NA A coding 583 1749 20 1768 70 PB.5103.2 chr7 - 1606 6 novel_not_in_catalog SERPINA1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 273 9653.6972192 4 1 0 FALSE 0 0 NA C coding 418 1254 278 1531 0 PB.11396.6 chr20 - 1406 2 novel_in_catalog IGSF6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 705 77 NA 9 1 0 FALSE 0 0 NA C coding 177 531 11 541 75 PB.8004.2 chr13 - 4161 30 incomplete-splice_match PSME4 rna43417 7051 46 2071 819 5prime_fragment TRUE canonical 47 837 182 340.163196128 2 5 0 FALSE 0 0 NA A coding 1039 3117 333 3449 40 PB.11396.1 chr20 + 1607 5 full-splice_match METTL9 rna61710 3227 5 104 1516 multi-exon FALSE canonical 48 631 314 1002.64101253 23 0 0 FALSE 0 0 NA C coding 318 954 150 1103 20 PB.11396.2 chr20 - 959 6 full-splice_match IGSF6 rna61714 1265 6 278 28 multi-exon FALSE canonical 40 699 435 77.4338427304 42 2 0 FALSE 0 0 NA C coding 241 723 9 731 55 PB.11396.3 chr20 - 2059 6 novel_not_in_catalog IGSF6 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 7 8 544 317.985848742 2 12 0 FALSE 0 0 NA C coding 219 657 11 667 20 PB.5475.4 chr8 - 2706 14 novel_in_catalog PABPC1 novel NA NA NA NA combination_of_known_junctions TRUE canonical 44 528 697 1498.24196978 9 0 0 FALSE 0 0 NA C coding 479 1437 1174 2610 75 PB.2017.1 chr3 - 1590 7 full-splice_match C3H21orf33 rna10838 886 7 58 -762 multi-exon FALSE canonical 33 170 162 631.882109258 15 2 0 FALSE 0 0 NA A coding 268 804 22 825 10 PB.913.1 chr1 + 2094 6 full-splice_match NSL1 rna4991 2140 6 43 3 multi-exon FALSE canonical 48 573 243 284.835039979 11 2 0 FALSE 0 0 NA C coding 281 843 10 852 15 PB.7537.3 chr12 + 1537 11 full-splice_match SSB rna40683 1556 11 13 6 multi-exon FALSE canonical 43 361 187 1400.70196687 2 2 0 FALSE 0 0 NA C coding 367 1101 132 1232 30 PB.7537.2 chr12 + 2657 11 novel_not_in_catalog SSB novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 592 1486.13727495 3 2 0 TRUE 0 0 NA C coding 183 549 1814 2362 60 PB.3826.1 chr6 - 1477 6 full-splice_match CMBL rna20863 1538 6 38 23 multi-exon FALSE canonical 22 202 230 282.980564704 15 3 0 FALSE 0 0 NA A coding 245 735 250 984 85 PB.5117.1 chr7 + 2066 3 full-splice_match GSKIP rna27659 2079 3 8 5 multi-exon FALSE canonical 37 308 43 248 9 0 0 FALSE 0 0 NA A coding 139 417 45 461 20 PB.5172.364 chr7 + 1567 8 fusion LOC708891_LOC711872 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 377 3708.66822458 3 14 0 TRUE 0 0 NA B coding 196 588 846 1433 15 PB.7439.1 chr12 + 5839 1 genic_intron novelGene_452 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A coding 99 297 2641 2937 65 PB.3731.6 chr5 - 2856 7 novel_not_in_catalog TMEM154 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 21 54 146 514.712541133 7 2 0 FALSE 0 0 NA C coding 105 315 317 631 70 PB.6979.1 chr11 - 1747 16 full-splice_match AAAS rna37991 1837 16 72 18 multi-exon FALSE canonical 33 231 214 176.465294038 14 1 0 FALSE 0 0 NA C coding 546 1638 92 1729 10 PB.10466.1 chr18 - 1920 10 full-splice_match ACAA2 rna56598 1861 10 -28 -31 multi-exon FALSE canonical 39 1028 417 1693.66289444 94 2 0 FALSE 0 0 NA C coding 397 1191 402 1592 15 PB.821.1 chr1 + 2824 17 full-splice_match NCSTN rna4523 2860 17 64 -28 multi-exon FALSE canonical 39 367 1473 213.025820031 237 1 0 FALSE 0 0 NA C coding 709 2127 19 2145 25 PB.10466.2 chr18 - 1450 9 novel_in_catalog ACAA2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 23 76 114 1939.00103146 2 0 0 FALSE 0 0 NA C coding 276 828 295 1122 15 PB.7652.1 chr12 + 4106 1 genic_intron novelGene_1648 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.4370.1 chr6 + 2585 17 novel_in_catalog RUFY1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 306 1614 226.011061676 2 2 0 FALSE 0 0 NA A coding 599 1797 311 2107 25 PB.5498.1 chr8 - 2857 7 full-splice_match SYBU rna29850 2707 7 -150 0 multi-exon FALSE canonical 18 88 178 199.40661975 10 1 0 FALSE 0 0 NA A coding 662 1986 155 2140 40 PB.5103.5 chr7 - 1525 5 novel_not_in_catalog SERPINA1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 191 8655.02068166 3 1 0 FALSE 0 0 NA C coding 418 1254 196 1449 0 PB.612.1 chr1 - 1394 10 full-splice_match WDR77 rna3315 1259 10 -61 -74 multi-exon FALSE canonical 28 47 196 206.596224554 9 0 0 FALSE 0 0 NA A coding 342 1026 82 1107 15 PB.5868.3 chr9 + 3643 25 novel_not_in_catalog HERC4 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 2 2757 371.59386432 2 1 0 FALSE 0 0 NA C coding 1063 3189 212 3400 45 PB.7959.1 chr13 - 2940 1 genic_intron novelGene_866 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.2876.1 chr4 + 2757 1 genic_intron novelGene_792 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 26 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.7161.1 chr11 - 3028 16 full-splice_match CEP83 rna38856 2998 16 -39 9 multi-exon FALSE canonical 36 225 313 131.483839311 2 3 1 FALSE 0 0 NA A coding 693 2079 439 2517 20 PB.7161.2 chr11 - 2857 1 genic_intron novelGene_1750 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.5172.477 chr7 + 1515 8 fusion LOC720839_LOC721089 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 270 2820.2070846 3 10 0 TRUE 0 0 NA B coding 103 309 73 381 20 PB.3786.9 chr5 - 5730 20 novel_not_in_catalog ACSL1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 138 2098.82490932 2 11 0 TRUE 0 0 NA C coding 365 1095 3113 4207 20 PB.8783.1 chr14 + 3263 2 novel_not_in_catalog YAP1 novel NA NA NA NA not any annotated donor/acceptor FALSE non_canonical 0 0 20 NA 4 4 0 TRUE 0 0 NA A non_coding NA NA NA NA 15 PB.3710.1 chr5 + 3171 2 novel_in_catalog LSM6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 938 65 NA 4 9 0 FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.9534.1 chr16 + 5636 34 incomplete-splice_match CHD3 rna51795 7338 40 1142 560 internal_fragment FALSE canonical 25 48 4773 420.145212992 2 5 0 FALSE 0 0 NA A coding 1544 4632 385 5016 15 PB.4742.1 chr7 + 3489 3 incomplete-splice_match CRTC3 rna25607 4923 15 1432 2 internal_fragment FALSE canonical 27 114 46 29.4957624075 2 1 0 FALSE 0 0 NA A coding 113 339 17 355 5 PB.5172.351 chr7 + 1533 8 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 342 3623.1896169 2 13 0 TRUE 0 0 NA B coding 196 588 819 1406 15 PB.7525.1 chr12 + 1738 1 genic_intron novelGene_1143 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.3488.1 chr5 + 3536 6 full-splice_match PAQR3 rna18927 3646 6 116 -6 multi-exon FALSE canonical 38 370 228 106.709887077 2 4 0 FALSE 0 0 NA A coding 311 933 44 976 30 PB.6996.6 chr11 - 3793 28 incomplete-splice_match ITGA5 rna38084 4446 30 632 21 5prime_fragment FALSE canonical 38 356 2370 145.979450609 8 1 0 FALSE 0 0 NA C coding 728 2184 607 2790 35 PB.10190.1 chr17 + 1601 1 intergenic novelGene_314 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5204.1 chr8 - 2803 1 genic_intron novelGene_284 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.5172.476 chr7 + 1582 8 fusion LOC708891_LOC721089 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 409 3552.71656623 2 23 0 TRUE 0 0 NA B coding 461 1383 73 1455 15 PB.778.1 chr1 - 3494 11 novel_not_in_catalog UBQLN4 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 24 62 524 134.903669335 21 2 0 TRUE 0 0 NA B coding 601 1803 47 1849 15 PB.778.3 chr1 - 3414 11 novel_not_in_catalog UBQLN4 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 17 27 141 150.462619943 6 3 0 TRUE 0 0 NA B coding 423 1269 504 1772 15 PB.805.8 chr1 + 1937 1 genic_intron novelGene_2227 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 30 PB.2586.1 chr3 - 2720 1 intergenic novelGene_2495 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 100 PB.11183.1 chr19 - 3130 4 full-splice_match LOC100423439 rna60613 3179 4 738 -689 multi-exon FALSE canonical 28 69 105 71.9166183855 8 3 0 FALSE 0 0 NA A coding 553 1659 112 1770 70 PB.8462.1 chr14 - 1843 4 full-splice_match CCDC86 rna45670 1267 4 54 -630 multi-exon FALSE canonical 25 60 895 3.31662479036 3 1 0 FALSE 0 0 NA A coding 360 1080 8 1087 20 PB.7277.1 chr11 + 3591 7 novel_in_catalog DTX1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 9 10 1649 46.9361268108 2 10 0 FALSE 0 0 NA A coding 285 855 1652 2506 0 PB.5088.4 chr7 + 2744 1 novel_in_catalog RIN3 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 8 2 NA FALSE 0 0 NA C coding 402 1206 513 1718 85 PB.7438.1 chr12 + 2729 1 genic_intron novelGene_449 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A coding 106 318 886 1203 65 PB.1897.1 chr2 - 2798 1 genic_intron novelGene_2560 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.6781.3 chr11 - 2943 5 novel_in_catalog KLRB1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 24 284 163 72.9520390394 4 0 0 FALSE 0 0 NA C coding 177 531 79 609 20 PB.327.1 chr1 + 5643 1 antisense novelGene_SLFNL1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 10 NA FALSE 0 0 NA A coding 196 588 4176 4763 75 PB.6781.1 chr11 - 1465 6 full-splice_match KLRB1 rna36904 1476 6 -1 12 multi-exon FALSE canonical 24 188 608 102.537797909 2 0 0 FALSE 0 0 NA C coding 227 681 79 759 10 PB.7354.1 chr11 - 2716 1 incomplete-splice_match PITPNM2 rna39680 7752 26 5035 2 mono-exon FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A coding 165 495 209 703 5 PB.4433.1 chr7 + 1665 1 incomplete-splice_match BAHD1 rna24054 4543 7 2871 8 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 30 PB.3838.1 chr6 - 4095 1 genic_intron novelGene_394 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 22 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.1186.1 chr1 + 1773 4 novel_not_in_catalog LOC106995199 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 14 26 277 106.179093987 2 0 0 FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.11558.10 chr20 - 7630 49 novel_not_in_catalog CNOT1 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 37 310 98 448.618992019 13 0 0 TRUE 0 0 NA B coding 2371 7113 273 7385 65 PB.5709.2 chr9 + 2146 1 genic_intron novelGene_514 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.7987.7 chr13 + 2828 1 genic_intron novelGene_995 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.10856.2 chr19 - 2698 5 novel_not_in_catalog LOC100427976 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 44 287 282 231.814581077 5 2 0 TRUE 0 0 NA A coding 492 1476 142 1617 90 PB.3711.2 chr5 - 3121 5 novel_in_catalog SLC10A7 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 252 615 108.802573499 2 0 0 FALSE 0 0 NA C coding 159 477 220 696 85 PB.7109.2 chr11 - 1428 7 novel_in_catalog TSPAN8 novel NA NA NA NA combination_of_known_junctions FALSE canonical 15 234 377 89.7663634108 2 2 0 FALSE 0 0 NA B coding 259 777 117 893 90 PB.11907.1 chrX - 1507 1 intergenic novelGene_1109 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.7696.17 chr12 + 2098 7 novel_in_catalog SLC11A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 25 409 1121 187.41664814 2 0 0 FALSE 0 0 NA C coding 220 660 66 725 85 PB.7109.1 chr11 - 1075 8 novel_in_catalog TSPAN8 novel NA NA NA NA combination_of_known_junctions FALSE canonical 15 234 380 94.297401873 20 2 0 FALSE 0 0 NA B coding 237 711 120 830 5 PB.7696.10 chr12 + 2869 6 novel_not_in_catalog SLC11A1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 24 70 205 323.717469408 2 3 0 FALSE 0 0 NA C coding 110 330 1870 2199 85 PB.1898.3 chr2 - 5488 2 novel_in_catalog RAB5A novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 800 272 NA 2 13 0 FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.9109.4 chr15 - 2953 1 genic_intron novelGene_338 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 14 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.9109.5 chr15 - 6174 2 novel_in_catalog NEK6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 635 1261 NA 2 12 0 FALSE 0 0 NA C coding 118 354 1145 1498 85 PB.9109.6 chr15 - 6285 1 novel_in_catalog NEK6 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA C coding 100 300 2341 2640 90 PB.10757.1 chr19 + 1722 6 full-splice_match MRI1 rna58063 1758 6 22 14 multi-exon FALSE canonical 3 3 199 121.391927244 8 1 0 FALSE 0 0 NA A coding 369 1107 68 1174 100 PB.5294.1 chr8 + 1852 5 full-splice_match BAG4 rna28798 4427 5 266 2309 multi-exon FALSE canonical 40 203 280 176.666352201 8 0 0 FALSE 0 0 NA A coding 457 1371 11 1381 10 PB.9109.1 chr15 - 2548 10 full-splice_match NEK6 rna49459 2575 10 21 6 multi-exon FALSE canonical 4 4 99 195.864749253 2 3 1 FALSE 0 0 NA C coding 313 939 129 1067 30 PB.9109.2 chr15 - 2555 10 full-splice_match NEK6 rna49458 2766 10 177 34 multi-exon FALSE canonical 25 57 134 183.155671493 5 2 0 FALSE 0 0 NA C coding 313 939 164 1102 30 PB.11053.1 chr19 + 1936 9 novel_not_in_catalog SAE1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 3 3 58 780.408226507 2 3 0 FALSE 0 0 NA C coding 303 909 90 998 10 PB.9830.4 chr16 + 3115 8 full-splice_match RARA rna53286 4082 8 965 2 multi-exon FALSE canonical 32 75 1304 112.33877336 11 17 2 FALSE 0 0 NA C coding 457 1371 308 1678 20 PB.11558.11 chr20 - 2854 1 novel_in_catalog CNOT1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA B non_coding NA NA NA NA 70 PB.9830.3 chr16 + 7001 1 novel_in_catalog RARA novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 19 NA FALSE 0 0 NA C coding 100 300 4133 4432 70 PB.9830.2 chr16 + 3375 9 full-splice_match RARA rna53283 3410 9 32 3 multi-exon FALSE canonical 20 28 191 120.320405584 10 1 0 FALSE 0 0 NA C coding 462 1386 554 1939 20 PB.4447.4 chr7 + 2631 1 intergenic novelGene_413 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.2001.2 chr3 + 4093 22 full-splice_match LSS rna10713 4166 22 62 11 multi-exon TRUE canonical 4 4 36 75.9868409661 12 3 0 FALSE 0 0 NA C coding 732 2196 23 2218 20 PB.2001.3 chr3 + 4235 21 novel_in_catalog LSS novel NA NA NA NA combination_of_known_junctions FALSE canonical 29 84 338 67.8675180038 2 2 0 FALSE 0 0 NA C coding 652 1956 399 2354 25 PB.2001.5 chr3 + 3396 16 novel_not_in_catalog LSS novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 102 85.4458893101 2 0 0 FALSE 0 0 NA C coding 500 1500 16 1515 25 PB.4447.2 chr7 + 2906 2 novel_not_in_catalog LOC106999151 novel NA NA NA NA not any annotated donor/acceptor FALSE non_canonical 0 0 24 NA 25 0 0 TRUE 0 0 NA B non_coding NA NA NA NA 85 PB.4447.3 chr7 + 2825 1 incomplete-splice_match LOC106999151 rna24109 4380 4 1454 102 mono-exon FALSE canonical NA NA NA NA 27 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 70 PB.8549.1 chr14 + 6113 1 antisense novelGene_CAT_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 10 NA FALSE 0 0 NA A coding 100 300 2825 3124 75 PB.6789.2 chr11 - 2184 6 full-splice_match CLEC7A rna36932 744 6 -91 -1349 multi-exon FALSE canonical 37 155 431 68.1028633759 3 2 0 FALSE 0 0 NA C coding 256 768 65 832 40 PB.6789.1 chr11 - 2047 5 full-splice_match CLEC7A rna36930 2145 5 98 0 multi-exon FALSE canonical 29 108 286 87.0057469366 2 3 0 FALSE 0 0 NA C coding 210 630 58 687 35 PB.8454.1 chr14 - 2416 7 novel_in_catalog LOC693992 novel NA NA NA NA combination_of_known_junctions FALSE canonical 38 158 123 198.02777583 20 9 0 FALSE 0 0 NA B coding 245 735 226 960 35 PB.11441.1 chr20 - 1410 4 full-splice_match YPEL3 rna61862 1618 4 203 5 multi-exon FALSE canonical 47 670 821 359.9097109 2 0 0 FALSE 0 0 NA A coding 155 465 553 1017 20 PB.9850.4 chr16 - 2731 10 full-splice_match GHDC rna53436 2343 10 -393 5 multi-exon TRUE canonical 28 158 436 44.6654228683 5 9 0 FALSE 0 0 NA C coding 529 1587 534 2120 20 PB.8454.4 chr14 - 2372 7 novel_not_in_catalog LOC693992 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 10 14 122 236.759371515 2 1 0 FALSE 0 0 NA B coding 245 735 176 910 20 PB.9582.2 chr16 - 1525 12 full-splice_match COPS3 rna52078 2259 12 654 80 multi-exon FALSE canonical 46 1719 681 469.955317025 38 0 0 FALSE 0 0 NA C coding 423 1269 61 1329 20 PB.214.1 chr1 + 4283 16 novel_not_in_catalog WDTC1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 299 212.014150471 2 26 0 TRUE 0 0 NA A coding 677 2031 400 2430 10 PB.8454.7 chr14 - 2731 6 novel_in_catalog LOC693992 novel NA NA NA NA combination_of_known_junctions FALSE canonical 30 61 531 230.397482625 5 1 0 FALSE 0 0 NA B coding 242 726 547 1272 25 PB.2533.2 chr3 - 1666 1 incomplete-splice_match UBE2H rna13718 5669 7 1934 2070 mono-exon FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA B non_coding NA NA NA NA 50 PB.2533.3 chr3 - 2813 8 novel_not_in_catalog UBE2H novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 73 871.193434319 2 6 0 TRUE 0 0 NA B coding 120 360 697 1056 65 PB.4011.1 chr6 + 2754 1 intergenic novelGene_1557 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.2533.4 chr3 - 1632 1 genic_intron novelGene_2390 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.5911.1 chr9 - 2804 1 intergenic novelGene_1611 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1043.1 chr1 - 5776 22 full-splice_match SMG7 rna5721 6802 22 1021 5 multi-exon FALSE canonical 30 63 2829 215.534220021 24 2 0 FALSE 0 0 NA C coding 1091 3273 226 3498 30 PB.6795.1 chr11 + 1790 1 full-splice_match SMIM10L1 rna36999 2569 1 978 -199 mono-exon FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.1944.2 chr2 + 2654 2 novel_not_in_catalog BCL6 novel NA NA NA NA not any annotated donor/acceptor FALSE canonical 0 0 338 NA 2 6 1 TRUE 0 0 NA B non_coding NA NA NA NA 75 PB.8529.1 chr14 - 2756 1 genic CD82 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.8529.3 chr14 - 2028 11 novel_in_catalog CD82 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 194 181 378.736055849 9 3 0 FALSE 0 0 NA C coding 266 798 330 1127 35 PB.8529.2 chr14 - 1876 10 full-splice_match CD82 rna46179 1915 10 30 9 multi-exon FALSE canonical 43 514 72 281.648717377 53 1 0 FALSE 0 0 NA C coding 266 798 175 972 30 PB.8202.12 chr13 - 2903 1 genic_intron novelGene_1774 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A coding 108 324 1231 1554 60 PB.2990.5 chr4 - 3070 1 novel_in_catalog ELOVL5 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.8394.4 chr14 + 6385 40 novel_in_catalog ATG2A novel NA NA NA NA combination_of_known_junctions FALSE canonical 8 8 3832 46 4 9 0 FALSE 0 0 NA C coding 1637 4911 74 4984 15 PB.8394.3 chr14 + 6322 41 full-splice_match ATG2A rna45313 6375 41 39 14 multi-exon FALSE canonical 2 2 2721 47.3919824443 12 0 0 FALSE 0 0 NA C coding 1940 5820 75 5894 15 PB.8394.2 chr14 + 6247 41 novel_not_in_catalog ATG2A novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 4568 46.4542785973 2 7 0 FALSE 0 0 NA C coding 1901 5703 123 5825 15 PB.8394.1 chr14 + 6147 41 novel_in_catalog ATG2A novel NA NA NA NA combination_of_known_junctions FALSE canonical 8 8 3684 45.8366665455 103 0 0 FALSE 0 0 NA C coding 1867 5601 121 5721 15 PB.1944.4 chr2 + 3244 1 novel_in_catalog BCL6 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA B non_coding NA NA NA NA 75 PB.11872.1 chrX + 1461 6 full-splice_match GATA1 rna63850 1502 6 37 4 multi-exon FALSE canonical 12 130 296 50.8133840637 2 0 0 FALSE 0 0 NA A coding 413 1239 77 1315 15 PB.3957.3 chr6 + 3687 1 genic_intron novelGene_1327 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.8041.1 chr13 + 1275 9 full-splice_match MDH1 rna43603 1650 9 371 4 multi-exon FALSE canonical 44 8437 68 1832.17903055 37 0 0 FALSE 0 0 NA C coding 334 1002 66 1067 30 PB.8920.1 chr14 + 2954 1 genic_intron novelGene_2042 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A coding 99 297 847 1143 80 PB.3677.2 chr5 + 3375 9 novel_in_catalog JADE1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 28 71 69 171.265875177 7 1 0 FALSE 0 0 NA C coding 509 1527 96 1622 30 PB.11574.2 chr20 + 2912 16 novel_in_catalog C20H16orf70 novel NA NA NA NA combination_of_known_junctions FALSE canonical 33 180 895 44.6318272088 2 5 0 FALSE 0 0 NA C coding 422 1266 235 1500 20 PB.11574.3 chr20 + 2745 17 novel_not_in_catalog C20H16orf70 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 440 89.9055059493 2 8 0 TRUE 0 0 NA C coding 252 756 579 1334 20 PB.11574.1 chr20 + 2758 17 full-splice_match C20H16orf70 rna62474 2835 17 71 6 multi-exon FALSE canonical 24 58 23 66.0605782597 30 0 0 FALSE 0 0 NA C coding 422 1266 81 1346 20 PB.5032.3 chr7 + 1596 9 novel_not_in_catalog FCF1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1299 260.236430962 2 7 1 TRUE 0 0 NA B coding 198 594 27 620 40 PB.1358.1 chr2 - 2802 1 incomplete-splice_match ZNF148 rna7242 9577 9 3190 3586 mono-exon FALSE canonical NA NA NA NA 5 7 NA FALSE 0 0 NA C non_coding NA NA NA NA 70 PB.5032.1 chr7 + 1609 9 novel_not_in_catalog FCF1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1301 260.236430962 4 7 0 TRUE 0 0 NA B coding 186 558 79 636 40 PB.1358.4 chr2 - 2821 9 full-splice_match ZNF148 rna7242 9577 9 38 6718 multi-exon FALSE canonical 47 314 207 746.697395201 110 3 0 FALSE 0 0 NA C coding 793 2379 441 2819 85 PB.10747.1 chr19 - 1725 7 novel_not_in_catalog DNASE2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1587 183.474793909 2 2 0 TRUE 0 0 NA C coding 361 1083 61 1143 85 PB.5699.1 chr9 + 2807 14 full-splice_match STAM rna30796 3100 14 132 161 multi-exon FALSE canonical 40 322 1473 106.911178087 30 0 0 FALSE 0 0 NA A coding 540 1620 89 1708 35 PB.10747.2 chr19 - 1419 6 full-splice_match DNASE2 rna58010 1813 6 227 167 multi-exon FALSE canonical 31 95 147 157.057314379 5 1 0 FALSE 0 0 NA C coding 361 1083 62 1144 85 PB.9858.1 chr16 - 3740 9 full-splice_match FAM134C rna53469 2018 9 53 -1775 multi-exon FALSE canonical 44 265 288 220.61731573 57 1 0 FALSE 0 0 NA A coding 466 1398 50 1447 45 PB.4852.1 chr7 + 2998 11 full-splice_match NUBPL rna26293 3069 11 53 18 multi-exon FALSE canonical 37 254 698 79.3977329651 10 2 0 FALSE 0 0 NA A coding 319 957 6 962 55 PB.5191.3 chr8 - 3654 1 novel_in_catalog MTMR9 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 5 NA FALSE 0 0 NA C non_coding NA NA NA NA 95 PB.2785.6 chr4 + 3586 8 novel_not_in_catalog TRIM38 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 7 10 84 341.422026237 2 2 0 FALSE 0 0 NA C coding 465 1395 372 1766 20 PB.2785.5 chr4 + 3115 8 novel_not_in_catalog TRIM38 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 10 11 92 394.096434899 2 1 0 FALSE 0 0 NA C coding 465 1395 123 1517 75 PB.6697.8 chr10 - 6447 37 full-splice_match PLXNB2 rna36388 6432 37 -23 8 multi-exon FALSE canonical 16 24 1263 273.821109486 80 1 0 FALSE 0 0 NA C coding 1844 5532 178 5709 10 PB.2785.3 chr4 + 2741 8 novel_not_in_catalog TRIM38 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 11 51 24 329.966664983 16 0 0 FALSE 0 0 NA C coding 465 1395 312 1706 65 PB.2785.2 chr4 + 3266 7 full-splice_match TRIM38 rna14908 3409 7 139 4 multi-exon FALSE canonical 32 119 22 328.268183046 6 3 0 FALSE 0 0 NA C coding 465 1395 53 1447 20 PB.2785.1 chr4 + 3491 8 full-splice_match TRIM38 rna14907 3633 8 139 3 multi-exon FALSE canonical 36 356 22 254.135790474 36 3 0 FALSE 0 0 NA C coding 465 1395 277 1671 20 PB.725.2 chr1 - 2713 1 genic_intron novelGene_2147 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 10 1 NA FALSE 0 0 NA A coding 105 315 2347 2661 75 PB.3607.2 chr5 + 2776 9 full-splice_match DAPP1 rna19512 3057 9 183 98 multi-exon FALSE canonical 30 284 129 72.6842486375 79 6 0 FALSE 0 0 NA C coding 280 840 29 868 20 PB.3607.1 chr5 + 2085 1 novel_in_catalog DAPP1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 5 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.3957.4 chr6 + 2638 11 incomplete-splice_match PIK3R1 rna21532 3142 15 718 -214 internal_fragment FALSE canonical 47 706 168 459.395254656 13 1 0 FALSE 0 0 NA C coding 454 1362 143 1504 80 PB.4766.1 chr7 - 2940 1 genic_intron novelGene_1469 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA A coding 116 348 2050 2397 90 PB.1259.1 chr2 + 2984 1 novel_in_catalog LOC106996754 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.6979.2 chr11 - 1620 16 full-splice_match AAAS rna37992 1629 16 -8 17 multi-exon FALSE canonical 33 183 86 182.663625279 2 1 0 FALSE 0 0 NA C coding 229 687 915 1601 10 PB.719.3 chr1 - 3818 8 novel_in_catalog SELENBP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 1144 3303 392.24609622 2 11 0 FALSE 0 0 NA C coding 167 501 3082 3582 10 PB.9826.1 chr16 - 5565 1 antisense novelGene_CASC3_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.719.1 chr1 - 1692 12 full-splice_match SELENBP1 rna3865 2140 12 39 409 multi-exon FALSE canonical 43 1144 1201 528.074805307 105 1 0 FALSE 0 0 NA C coding 472 1416 65 1480 45 PB.9088.1 chr15 + 3500 5 full-splice_match ANGPTL2 rna49386 3623 5 118 5 multi-exon FALSE canonical 22 195 368 68.9782574439 23 2 0 FALSE 0 0 NA A coding 493 1479 418 1896 15 PB.8157.1 chr13 - 3254 1 incomplete-splice_match TMEM127 rna44149 4194 4 935 6 mono-exon FALSE canonical NA NA NA NA 6 3 NA FALSE 0 0 NA C coding 111 333 1118 1450 15 PB.12027.2 chrX - 4230 1 antisense novelGene_LOC705165_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11249.1 chr20 - 3419 16 novel_not_in_catalog UNKL novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 1111 30.0665927567 2 10 0 TRUE 0 0 NA A coding 429 1287 30 1316 5 PB.3786.1 chr5 - 3237 21 novel_not_in_catalog ACSL1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 111 2072.52044622 92 13 0 TRUE 0 0 NA C coding 722 2166 74 2239 40 PB.3786.7 chr5 - 3832 21 full-splice_match ACSL1 rna20641 3914 21 75 7 multi-exon FALSE canonical 33 804 182 2405.82875534 4 5 0 FALSE 0 0 NA C coding 698 2094 215 2308 20 PB.3786.6 chr5 - 2693 11 incomplete-splice_match ACSL1 rna20638 3839 22 1139 7 5prime_fragment FALSE canonical 41 953 68 2339.94914475 2 1 0 FALSE 0 0 NA C coding 374 1122 48 1169 20 PB.7506.1 chr12 - 2967 1 genic_intron novelGene_928 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.8931.2 chr14 - 5170 8 full-splice_match ETS1 rna48510 2219 8 100 -3051 multi-exon FALSE canonical 42 711 1274 464.441600204 2 17 0 FALSE 0 0 NA C coding 441 1323 284 1606 15 PB.2276.1 chr3 - 3331 10 full-splice_match FKBP9 rna12180 3484 10 103 50 multi-exon FALSE canonical 31 386 317 226.075208725 66 1 0 FALSE 0 0 NA A coding 570 1710 97 1806 40 PB.4236.1 chr6 + 4114 22 full-splice_match FBXO38 rna22956 4424 22 33 277 multi-exon FALSE canonical 41 398 2787 226.821515734 4 5 0 FALSE 0 0 NA C coding 1188 3564 135 3698 0 PB.180.1 chr1 - 1612 1 antisense novelGene_CLIC4_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 9 1 NA FALSE 0 0 NA A coding 104 312 469 780 90 PB.7625.6 chr12 - 1451 1 novel_in_catalog CLK1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 5 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.8235.1 chr13 + 3218 11 full-splice_match SLC20A1 rna44518 3315 11 88 9 multi-exon FALSE canonical 42 213 120 220.898166584 53 2 0 FALSE 0 0 NA C coding 679 2037 387 2423 30 PB.8235.3 chr13 + 1564 4 novel_in_catalog SLC20A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 42 213 209 165.459964946 4 5 0 FALSE 0 0 NA C coding 217 651 476 1126 85 PB.8235.2 chr13 + 3347 11 novel_not_in_catalog SLC20A1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1178 281.625638037 3 7 0 TRUE 0 0 NA C coding 426 1278 1275 2552 30 PB.8235.5 chr13 + 3367 12 novel_not_in_catalog SLC20A1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 4 4 1133 312.552395608 9 4 0 FALSE 0 0 NA C coding 426 1278 1294 2571 30 PB.8235.4 chr13 + 1844 3 novel_not_in_catalog SLC20A1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 887 106.498826285 2 10 1 TRUE 0 0 NA C coding 183 549 476 1024 85 PB.1027.1 chr1 - 1651 14 full-splice_match C1H1orf27 rna5666 1747 14 22 74 multi-exon FALSE non_canonical 0 0 1137 213.032861315 9 0 0 FALSE 0 0 NA A coding 454 1362 138 1499 20 PB.8235.6 chr13 + 3317 11 novel_not_in_catalog SLC20A1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1133 281.625638037 5 5 0 FALSE 0 0 NA C coding 683 2049 476 2524 30 PB.5172.417 chr7 + 1472 8 novel_not_in_catalog LOC720839 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 345 2254.14285262 2 15 0 TRUE 0 0 NA B coding 241 723 705 1427 20 PB.6288.11 chr10 + 1965 1 novel_in_catalog CPNE1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA B non_coding NA NA NA NA 25 PB.6288.10 chr10 + 2772 2 novel_not_in_catalog CPNE1 novel NA NA NA NA not any annotated donor/acceptor FALSE canonical 0 0 1106 NA 2 1 1 TRUE 0 0 NA B non_coding NA NA NA NA 25 PB.9593.5 chr16 - 4118 30 full-splice_match FLII rna52133 4357 30 210 29 multi-exon FALSE canonical 22 36 1261 605.830009161 154 2 0 FALSE 0 0 NA C coding 1269 3807 16 3822 45 PB.9593.9 chr16 - 2659 20 novel_not_in_catalog FLII novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 635 713.670792453 2 10 0 TRUE 0 0 NA C coding 510 1530 834 2363 45 PB.4472.1 chr7 - 2336 13 full-splice_match EPB42 rna24243 2453 13 114 3 multi-exon FALSE canonical 21 173 1020 94.3186089804 6 1 0 FALSE 0 0 NA A coding 691 2073 189 2261 20 PB.7625.2 chr12 - 3171 11 novel_in_catalog CLK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 3037 2815 847.144615753 28 3 0 FALSE 0 0 NA C coding 333 999 1958 2956 25 PB.7730.8 chr12 - 2704 1 genic_intron novelGene_1896 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA B coding 110 330 535 864 90 PB.1970.3 chr2 - 1823 1 genic PPP1R2 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 5 2 NA FALSE 0 0 NA C coding 45 135 460 594 85 PB.5172.414 chr7 + 1518 8 novel_not_in_catalog LOC720839 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 316 2879.79218 2 15 0 TRUE 0 0 NA B coding 479 1437 36 1472 25 PB.11898.1 chrX - 5652 26 full-splice_match KDM5C rna64014 6709 26 300 757 multi-exon FALSE canonical 40 159 2856 324.012345444 48 8 0 FALSE 0 0 NA C coding 1557 4671 235 4905 30 PB.7625.1 chr12 - 1777 13 full-splice_match CLK1 rna41151 1812 13 36 -1 multi-exon TRUE canonical 47 1001 578 1441.15613311 4 2 0 FALSE 0 0 NA C coding 484 1452 98 1549 35 PB.7983.1 chr13 + 3203 3 novel_in_catalog CRIPT novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 1219 83 112 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.711.2 chr1 + 3576 1 genic TNFAIP8L2 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 7 2 NA FALSE 0 0 NA C coding 228 684 1908 2591 90 PB.711.1 chr1 + 1640 2 full-splice_match TNFAIP8L2 rna3820 1161 2 3 -482 multi-exon FALSE canonical 29 483 74 NA 6 1 0 FALSE 0 0 NA C coding 184 552 107 658 85 PB.3673.1 chr5 + 1663 1 genic_intron novelGene_2155 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8940.1 chr14 + 3091 19 full-splice_match ST14 rna48558 3336 19 242 3 multi-exon FALSE canonical 28 111 2402 109.813478226 2 3 0 FALSE 0 0 NA C coding 683 2049 513 2561 15 PB.359.1 chr1 - 3529 4 fusion LOC106998246_TMEM53 novel NA NA NA NA no_subcategory FALSE canonical 15 37 262 31.6227766017 3 1 0 FALSE 0 0 NA A coding 111 333 80 412 15 PB.2200.1 chr3 + 3158 2 full-splice_match ERV3-1 rna11746 3158 2 -26 26 multi-exon FALSE canonical 46 433 114 NA 37 0 0 FALSE 0 0 NA C coding 564 1692 620 2311 10 PB.116.5 chr1 + 5854 1 genic_intron novelGene_374 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 13 NA FALSE 0 0 NA A coding 130 390 3369 3758 85 PB.8626.1 chr14 + 2808 5 novel_not_in_catalog SBF2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 860 312.846607781 2 4 0 FALSE 0 0 NA A coding 195 585 926 1510 65 PB.3250.1 chr4 + 1778 2 antisense novelGene_RPF2_AS novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 26 NA 2 0 0 FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.6966.1 chr11 + 2848 14 full-splice_match ZCCHC8 rna37905 2957 14 99 10 multi-exon FALSE canonical 37 301 329 139.917833031 26 0 0 FALSE 0 0 NA C coding 707 2121 131 2251 45 PB.10332.1 chr17 - 1367 2 incomplete-splice_match GPR18 rna55774 2073 3 677 29 5prime_fragment FALSE canonical 29 184 199 NA 8 1 0 FALSE 0 0 NA A coding 331 993 234 1226 35 PB.10332.3 chr17 - 2892 1 novel_in_catalog GPR183 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 35 PB.10332.2 chr17 - 1391 2 full-splice_match GPR183 rna55775 1998 2 310 297 multi-exon FALSE canonical 26 600 55 NA 82 0 0 FALSE 0 0 NA C coding 357 1071 86 1156 40 PB.6286.11 chr10 + 2732 16 full-splice_match RBM39 rna34238 2166 16 100 -666 multi-exon FALSE canonical 44 366 632 2141.25640688 14 1 0 FALSE 0 0 NA C coding 508 1524 337 1860 35 PB.1530.2 chr2 - 2556 11 novel_not_in_catalog MAPKAPK3 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 94 344.544627008 10 0 0 TRUE 0 0 NA C coding 382 1146 151 1296 10 PB.6286.13 chr10 + 2775 17 novel_not_in_catalog RBM39 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1503 2092.48178009 2 3 0 TRUE 0 0 NA C coding 405 1215 328 1542 55 PB.6286.12 chr10 + 2982 19 novel_not_in_catalog RBM39 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 21 52 1583 2531.12544138 2 5 0 FALSE 0 0 NA C coding 247 741 881 1621 55 PB.6543.2 chr10 + 1689 3 novel_not_in_catalog YWHAH novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 59 707 13 3 0 TRUE 0 0 NA C coding 246 738 141 878 15 PB.6543.1 chr10 + 1622 2 full-splice_match YWHAH rna35735 1653 2 32 -1 multi-exon FALSE canonical 40 1414 160 NA 18 1 0 FALSE 0 0 NA C coding 246 738 74 811 15 PB.10634.2 chr19 + 2793 21 full-splice_match SAFB rna57438 3123 21 313 17 multi-exon FALSE canonical 34 101 2308 579.360854736 88 1 0 FALSE 0 0 NA C coding 859 2577 30 2606 20 PB.10634.3 chr19 + 3060 21 full-splice_match SAFB rna57440 3112 21 49 3 multi-exon FALSE canonical 32 65 2567 581.847918274 27 1 0 FALSE 0 0 NA C coding 914 2742 118 2859 25 PB.10761.1 chr19 - 1626 4 full-splice_match ASF1B rna58108 1888 4 211 51 multi-exon FALSE canonical 45 285 222 103.764155661 76 2 0 FALSE 0 0 NA A coding 202 606 114 719 30 PB.10093.3 chr16 - 2681 1 novel_in_catalog NPLOC4 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 85 PB.10093.2 chr16 - 3437 10 incomplete-splice_match NPLOC4 rna54577 4417 17 974 6 5prime_fragment FALSE canonical 39 161 912 236.567115213 2 7 0 FALSE 0 0 NA B coding 255 765 303 1067 25 PB.8784.1 chr14 + 4630 9 full-splice_match BIRC3 rna47747 6874 9 94 2150 multi-exon FALSE canonical 39 359 80 310.274072394 8 7 0 FALSE 0 0 NA C coding 604 1812 2759 4570 25 PB.7058.1 chr11 - 2610 1 intergenic novelGene_1195 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.7730.1 chr12 - 7238 55 novel_not_in_catalog DOCK10 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 361 206.482444774 3 1 0 TRUE 0 0 NA B coding 1955 5865 744 6608 20 PB.6866.2 chr11 - 3480 12 incomplete-splice_match IPO8 rna37377 5047 21 1562 5 5prime_fragment FALSE canonical 47 502 375 218.002293566 2 13 0 FALSE 0 0 NA B coding 526 1578 28 1605 20 PB.6442.1 chr10 + 1862 11 full-splice_match USP18 rna35101 2131 11 261 8 multi-exon FALSE canonical 19 47 53 58.3266662857 22 0 0 FALSE 0 0 NA A coding 374 1122 156 1277 35 PB.10992.1 chr19 - 1818 15 novel_not_in_catalog POU2F2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1345 13.7840487521 4 0 0 TRUE 0 0 NA B coding 458 1374 9 1382 90 PB.937.11 chr1 - 3103 11 novel_not_in_catalog CD46 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 505 1467.39974104 2 8 0 TRUE 0 0 NA C coding 163 489 704 1192 45 PB.6864.1 chr11 + 3500 12 full-splice_match FAR2 rna37366 3783 12 273 10 multi-exon FALSE canonical 34 526 1421 162.536149825 20 4 0 FALSE 0 0 NA A coding 515 1545 165 1709 30 PB.8948.1 chr14 - 3495 24 incomplete-splice_match NCAPD3 rna48619 4889 33 1379 15 5prime_fragment FALSE canonical 38 265 2532 189.994736769 2 0 0 FALSE 0 0 NA B coding 956 2868 125 2992 40 PB.10111.3 chr16 - 5763 28 incomplete-splice_match FASN rna54648 8568 43 2777 28 5prime_fragment FALSE canonical 14 25 1896 93.139680051 5 2 0 FALSE 0 0 NA B coding 1478 4434 584 5017 35 PB.7730.3 chr12 - 7259 55 novel_not_in_catalog DOCK10 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 358 197.694208312 6 5 0 TRUE 0 0 NA B coding 1964 5892 741 6632 10 PB.10386.1 chr18 + 2834 3 novel_not_in_catalog ZBTB14 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 227 138 12 19 0 FALSE 0 0 NA A coding 443 1329 327 1655 30 PB.10111.4 chr16 - 5878 29 incomplete-splice_match FASN rna54648 8568 43 2666 24 5prime_fragment TRUE canonical 14 25 2007 91.5478017213 2 3 0 FALSE 0 0 NA B coding 1478 4434 695 5128 35 PB.3525.1 chr5 - 2737 7 full-splice_match DCK rna19081 1328 7 -90 -1319 multi-exon FALSE canonical 39 515 236 120.324561084 22 25 0 FALSE 0 0 NA C coding 260 780 146 925 40 PB.7588.3 chr12 - 4431 31 full-splice_match NCKAP1 rna40953 4421 31 15 -25 multi-exon FALSE canonical 32 717 348 507.524383651 2 1 0 FALSE 0 0 NA C coding 1128 3384 241 3624 30 PB.7588.2 chr12 - 3473 25 incomplete-splice_match NCKAP1 rna40952 4195 31 711 11 5prime_fragment FALSE canonical 32 1749 2553 369.749915483 4 2 0 FALSE 0 0 NA C coding 881 2643 25 2667 30 PB.11898.2 chrX - 5940 25 novel_in_catalog KDM5C novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 159 3077 328.118880895 3 11 0 FALSE 0 0 NA C coding 791 2373 331 2703 30 PB.9320.1 chr15 + 2975 20 full-splice_match TTC39B rna50616 3263 20 199 89 multi-exon FALSE canonical 32 187 72 99.2622788374 4 5 0 FALSE 0 0 NA A coding 616 1848 31 1878 15 PB.2208.1 chr3 + 1569 3 full-splice_match MRPS17 rna11812 675 3 67 -961 multi-exon FALSE canonical 32 196 38 314.499602543 5 3 0 FALSE 0 0 NA A coding 130 390 57 446 15 PB.9320.2 chr15 + 2848 1 genic_intron novelGene_1368 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.4284.1 chr6 + 2683 8 novel_not_in_catalog CNOT8 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 281 559.562328968 2 4 0 TRUE 0 0 NA B coding 292 876 471 1346 25 PB.12060.1 chrX - 3819 31 incomplete-splice_match THOC2 rna64976 4992 39 48 1125 internal_fragment FALSE canonical 43 444 3515 153.515471533 40 5 0 FALSE 0 0 NA B coding 1269 3807 13 3819 65 PB.10072.5 chr16 - 3647 5 novel_in_catalog LGALS3BP novel NA NA NA NA combination_of_known_junctions FALSE canonical 35 225 361 114.730118103 5 1 0 FALSE 0 0 NA C coding 381 1143 2195 3337 25 PB.5172.478 chr7 + 1521 9 fusion LOC720839_LOC721089 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 220 2765.69575333 2 15 0 TRUE 0 0 NA B coding 416 1248 228 1475 25 PB.8535.8 chr14 - 6287 1 genic_intron novelGene_509 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8535.7 chr14 - 2808 1 genic_intron novelGene_508 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.937.10 chr1 - 3190 12 novel_not_in_catalog CD46 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 4 4 921 1428.46666044 2 6 1 FALSE 0 0 NA C coding 302 906 115 1020 25 PB.8535.5 chr14 - 3441 20 full-splice_match TTC17 rna46212 3688 20 54 193 multi-exon FALSE canonical 44 339 2846 328.846468736 22 0 0 FALSE 0 0 NA C coding 956 2868 11 2878 60 PB.8535.2 chr14 - 3552 1 novel_in_catalog TTC17 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA C coding 87 261 85 345 85 PB.8535.3 chr14 - 3581 24 novel_not_in_catalog TTC17 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 30 72 1708 420.121411023 3 2 0 FALSE 0 0 NA C coding 464 1392 2150 3541 80 PB.8535.1 chr14 - 3643 25 full-splice_match TTC17 rna46210 4692 25 55 994 multi-exon FALSE canonical 44 324 2846 382.365008859 69 0 0 FALSE 0 0 NA C coding 1198 3594 11 3604 75 PB.2216.10 chr3 - 3934 8 fusion IKZF1_LOC106997425 novel NA NA NA NA no_subcategory FALSE canonical 9 15 437 416.026441467 2 6 0 FALSE 0 0 NA B coding 519 1557 452 2008 70 PB.3204.1 chr4 + 2329 5 novel_in_catalog CTGF novel NA NA NA NA combination_of_known_junctions FALSE canonical 0 0 266 301.779720989 3 3 0 FALSE 0 0 NA A coding 315 945 302 1246 25 PB.2216.13 chr3 - 1786 1 novel_in_catalog IKZF1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 18 0 NA FALSE 0 0 NA B coding 102 306 30 335 65 PB.5187.2 chr8 - 1566 3 novel_in_catalog FDFT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1460 171 385 2 1 0 FALSE 0 0 NA C coding 136 408 73 480 85 PB.2216.15 chr3 - 3046 1 incomplete-splice_match LOC106997425 rna11883 5594 3 869 1680 mono-exon FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA B non_coding NA NA NA NA 70 PB.2216.16 chr3 - 2966 1 novel_in_catalog LOC106997425 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA B non_coding NA NA NA NA 65 PB.5187.1 chr8 - 1696 8 full-splice_match FDFT1 rna28234 2022 8 -7 333 multi-exon FALSE canonical 48 1460 192 605.834135717 65 0 0 FALSE 0 0 NA C coding 417 1251 94 1344 35 PB.9036.1 chr15 - 4317 26 full-splice_match USP20 rna49113 4357 26 33 7 multi-exon FALSE canonical 22 30 1319 150.777982478 11 4 0 FALSE 0 0 NA A coding 914 2742 185 2926 15 PB.1535.4 chr2 + 1829 6 full-splice_match RASSF1 rna8281 2039 6 206 4 multi-exon FALSE canonical 12 14 252 270.070361202 7 0 0 FALSE 0 0 NA C coding 340 1020 3 1022 20 PB.4949.1 chr7 - 1612 1 novel_in_catalog LOC106999448 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.6215.6 chr10 + 1535 1 incomplete-splice_match NCOA5 rna33901 3124 7 1577 13 mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 55 PB.1243.1 chr2 + 1599 6 full-splice_match TMEM45A rna6781 1177 6 -95 -327 multi-exon FALSE canonical 23 102 926 41.4728827067 2 2 0 FALSE 0 0 NA A coding 275 825 339 1163 30 PB.8931.3 chr14 - 3538 1 genic_intron novelGene_2071 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A coding 121 363 1838 2200 80 PB.1535.3 chr2 + 1315 1 genic_intron novelGene_1720 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 2 NA FALSE 0 0 NA A coding 130 390 174 563 55 PB.6215.2 chr10 + 3248 8 novel_not_in_catalog NCOA5 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 13 19 1348 239.618446702 4 2 1 FALSE 0 0 NA C coding 406 1218 176 1393 55 PB.9195.3 chr15 - 1804 13 incomplete-splice_match RNF20 rna49910 3895 20 -11 2102 internal_fragment FALSE canonical 39 343 43 264.08900015 4 0 0 FALSE 0 0 NA C coding 578 1734 70 1803 50 PB.9195.2 chr15 - 3732 20 full-splice_match RNF20 rna49910 3895 20 -22 185 multi-exon FALSE canonical 39 343 54 237.558413869 31 1 0 FALSE 0 0 NA C coding 975 2925 81 3005 20 PB.4679.4 chr7 + 1441 1 genic_intron novelGene_1133 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.4562.2 chr7 - 3133 10 novel_not_in_catalog BNIP2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 8 10 538 516.685591051 4 3 0 FALSE 0 0 NA B coding 107 321 244 564 45 PB.4562.1 chr7 - 3893 9 novel_in_catalog BNIP2 novel NA NA NA NA combination_of_known_junctions TRUE canonical 47 662 186 322.280933349 2 14 0 FALSE 0 0 NA B coding 117 351 244 594 50 PB.1694.1 chr2 + 1408 9 full-splice_match ALG3 rna9054 1548 9 42 98 multi-exon FALSE canonical 30 80 735 121.786698781 31 0 0 FALSE 0 0 NA C coding 438 1314 10 1323 20 PB.5062.1 chr7 - 3835 1 novel_in_catalog CEP128 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A coding 101 303 226 528 85 PB.4562.4 chr7 - 3590 1 novel_in_catalog BNIP2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.1694.2 chr2 + 1478 10 novel_not_in_catalog ALG3 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 170 141.795627577 3 2 0 TRUE 0 0 NA C coding 424 1272 24 1295 25 PB.9749.6 chr16 - 1673 1 incomplete-splice_match KAT7 rna52896 3553 14 1877 4 mono-exon FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 15 PB.9749.7 chr16 - 3422 15 novel_not_in_catalog KAT7 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 343 441.729555271 2 2 0 TRUE 0 0 NA C coding 558 1674 156 1829 15 PB.1007.4 chr1 + 2457 1 incomplete-splice_match ZNF281 rna5540 4901 2 1100 1345 mono-exon FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA C coding 572 1716 7 1722 80 PB.1007.3 chr1 + 2976 3 novel_not_in_catalog ZNF281 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 261 11 2 11 2 TRUE 0 0 NA C coding 860 2580 114 2693 75 PB.9749.3 chr16 - 3567 15 full-splice_match KAT7 rna52895 3708 15 123 18 multi-exon FALSE canonical 43 582 170 243.989753883 138 0 0 FALSE 0 0 NA C coding 611 1833 156 1988 20 PB.9749.1 chr16 - 5485 14 novel_in_catalog KAT7 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 582 162 252.691511531 2 1 0 FALSE 0 0 NA C coding 351 1053 148 1200 10 PB.5172.325 chr7 + 1564 9 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 393 3581.15330585 4 16 0 TRUE 0 0 NA B coding 196 588 845 1432 15 PB.5172.324 chr7 + 1550 8 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 352 3623.1896169 3 3 0 TRUE 0 0 NA B coding 459 1377 39 1415 15 PB.5172.327 chr7 + 1912 8 novel_not_in_catalog LOC711872 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 348 3396.0984968 2 12 0 TRUE 0 0 NA B coding 375 1125 666 1790 35 PB.5172.326 chr7 + 1494 7 novel_not_in_catalog LOC720839 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 374 2919.63302489 2 16 0 TRUE 0 0 NA B coding 470 1410 39 1448 25 PB.5172.321 chr7 + 1500 7 novel_not_in_catalog LOC720839 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 377 2352.13605049 4 12 0 TRUE 0 0 NA B coding 245 735 721 1455 20 PB.5172.320 chr7 + 1927 10 novel_not_in_catalog LOC711872 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 187 3264.33852411 2 18 0 TRUE 0 0 NA B coding 375 1125 683 1807 35 PB.3232.1 chr4 - 966 7 full-splice_match RWDD1 rna17603 936 7 72 -102 multi-exon FALSE canonical 45 1005 144 466.985010466 2 1 0 FALSE 0 0 NA A coding 243 729 72 800 50 PB.5172.322 chr7 + 1501 6 novel_not_in_catalog LOC720839 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 379 3040.98388684 4 24 0 TRUE 0 0 NA B coding 151 453 40 492 20 PB.10105.1 chr16 - 1477 9 novel_in_catalog NOTUM novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 1 1 253 13.152946438 2 0 0 FALSE 0 0 NA A coding 101 303 1068 1370 45 PB.2200.3 chr3 + 7503 1 full-splice_match ERV3-1 rna11748 2348 1 -4842 -313 mono-exon FALSE canonical NA NA NA NA 2 17 NA FALSE 0 0 NA C coding 564 1692 4963 6654 15 PB.4112.1 chr6 - 2802 1 genic_intron novelGene_2134 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 5 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.5172.329 chr7 + 2107 11 novel_not_in_catalog LOC711872 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 294 3181.38680452 2 26 2 TRUE 0 0 NA B coding 396 1188 666 1853 20 PB.9348.2 chr15 + 2155 18 full-splice_match PUM3 rna50805 2215 18 60 0 multi-exon FALSE canonical 39 408 32 195.197336047 2 0 0 FALSE 0 0 NA C coding 647 1941 43 1983 30 PB.9348.1 chr15 + 2648 10 novel_in_catalog PUM3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 408 38 225.466183717 6 6 0 FALSE 0 0 NA C coding 353 1059 49 1107 80 PB.10995.1 chr19 + 2818 3 full-splice_match ZNF526 rna59389 2872 3 52 2 multi-exon FALSE canonical 33 98 63 25 44 0 0 FALSE 0 0 NA A coding 670 2010 175 2184 20 PB.4233.3 chr6 + 2626 16 incomplete-splice_match RBM27 rna22895 6539 21 14 3899 3prime_fragment FALSE canonical 44 577 1440 246.022356708 3 1 0 FALSE 0 0 NA B coding 821 2463 162 2624 60 PB.8877.1 chr14 + 2763 9 novel_in_catalog HINFP novel NA NA NA NA combination_of_known_junctions FALSE canonical 25 61 62 56.6215506676 2 5 0 FALSE 0 0 NA B coding 311 933 1274 2206 20 PB.4545.1 chr7 + 4023 13 full-splice_match TCF12 rna24599 6088 13 2054 11 multi-exon FALSE canonical 27 152 192 476.751507601 3 3 0 FALSE 0 0 NA A coding 512 1536 124 1659 45 PB.2321.1 chr3 - 2952 1 intergenic novelGene_1665 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.9336.1 chr15 + 2863 1 antisense novelGene_LOC106993772_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 15 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.10383.1 chr18 - 3448 1 genic_intron novelGene_74 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 4 NA FALSE 0 0 NA A coding 117 351 3064 3414 85 PB.3107.1 chr4 - 3872 1 genic_intron novelGene_1917 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A coding 122 366 1483 1848 85 PB.11600.2 chr20 + 2508 6 novel_not_in_catalog PLA2G15 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 14 18 550 110.340382454 5 2 0 FALSE 0 0 NA C coding 236 708 49 756 15 PB.11600.3 chr20 + 2626 6 full-splice_match PLA2G15 rna62602 2304 6 31 -353 multi-exon FALSE canonical 28 122 551 83.0662386292 52 3 0 FALSE 0 0 NA C coding 412 1236 50 1285 15 PB.2048.4 chr3 - 1620 2 intergenic novelGene_191 novel NA NA NA NA no_subcategory FALSE canonical 15 26 96 NA 2 3 0 FALSE 0 0 NA A coding 104 312 829 1140 80 PB.8160.1 chr13 - 1463 1 full-splice_match LOC106993079 rna44153 1445 1 -17 -1 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A coding 116 348 324 671 20 PB.416.1 chr1 + 1717 8 full-splice_match LRRC42 rna2220 1748 8 26 5 multi-exon FALSE canonical 22 42 192 102.430464218 13 3 0 FALSE 0 0 NA A coding 428 1284 207 1490 15 PB.4826.4 chr7 + 3789 16 novel_not_in_catalog DCAF11 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 170 492.929000973 3 5 0 TRUE 0 0 NA C coding 546 1638 225 1862 10 PB.307.1 chr1 - 1802 8 full-splice_match RHBDL2 rna1569 2757 8 395 560 multi-exon FALSE canonical 7 8 103 10.6301458127 2 1 0 FALSE 0 0 NA C coding 303 909 229 1137 50 PB.2313.2 chr3 + 2717 9 novel_in_catalog FAM126A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 3 3 648 293.931964917 2 1 0 FALSE 0 0 NA B coding 139 417 235 651 70 PB.9775.2 chr16 + 1377 5 full-splice_match CBX1 rna52995 2225 5 32 816 multi-exon FALSE canonical 45 572 217 417.588314013 15 0 0 FALSE 0 0 NA C coding 185 555 255 809 80 PB.9775.1 chr16 + 1393 7 novel_not_in_catalog CBX1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 37 131 103 645.409172541 2 0 0 TRUE 0 0 NA C coding 185 555 343 897 35 PB.2313.1 chr3 + 2796 11 novel_in_catalog FAM126A novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 278 196 194.930756937 24 1 0 FALSE 0 0 NA B coding 479 1437 225 1661 45 PB.5445.1 chr8 + 3714 16 full-splice_match ESRP1 rna29564 3936 16 219 3 multi-exon FALSE canonical 6 20 1747 42.201895692 18 1 0 FALSE 0 0 NA C coding 677 2031 109 2139 25 PB.11540.1 chr20 + 1879 6 full-splice_match ARL2BP rna62307 1993 6 111 3 multi-exon FALSE canonical 46 507 106 226.344869613 31 0 0 FALSE 0 0 NA A coding 163 489 69 557 35 PB.5445.2 chr8 + 4037 1 novel_in_catalog ESRP1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.4559.1 chr7 + 3842 2 genic_intron novelGene_796 novel NA NA NA NA no_subcategory FALSE canonical 0 0 3721 NA 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA 10 PB.8154.1 chr13 + 3721 24 full-splice_match PROM2 rna44128 5623 24 919 983 multi-exon FALSE canonical 2 6 1418 38.7427412556 7 7 0 FALSE 0 0 NA C coding 834 2502 145 2646 10 PB.1442.3 chr2 + 3515 1 genic_intron novelGene_1362 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A coding 133 399 2661 3059 80 PB.4955.1 chr7 + 3478 9 novel_in_catalog PCNXL4 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 436 2668 55.5607775324 4 1 0 FALSE 0 0 NA A coding 937 2811 107 2917 25 PB.4790.3 chr7 - 5689 41 incomplete-splice_match TEP1 rna25836 6409 46 712 8 5prime_fragment FALSE canonical 38 153 2963 172.638350316 2 3 0 FALSE 0 0 NA B coding 1833 5499 76 5574 40 PB.10468.6 chr18 - 2960 17 novel_in_catalog MBD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 11 16 1139 445.126948184 7 2 0 FALSE 0 0 NA C coding 604 1812 162 1973 15 PB.5006.4 chr7 + 3005 6 novel_in_catalog SRSF5 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 5554 111 3463.50978055 4 2 0 FALSE 0 0 NA C coding 145 435 2029 2463 20 PB.5731.8 chr9 - 2870 1 genic_intron novelGene_681 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.5006.2 chr7 + 1494 8 full-splice_match SRSF5 rna26985 2502 8 1007 1 multi-exon FALSE canonical 48 4969 496 3461.35277023 42 2 0 FALSE 0 0 NA C coding 272 816 131 946 5 PB.5006.3 chr7 + 2853 7 novel_in_catalog SRSF5 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1554 239 4300.28150241 10 2 0 FALSE 0 0 NA C coding 145 435 1871 2305 5 PB.9498.1 chr16 - 1114 6 full-splice_match C1QBP rna51576 1321 6 61 146 multi-exon FALSE canonical 46 1141 273 1428.97795644 2 2 0 FALSE 0 0 NA A coding 281 843 42 884 30 PB.11385.1 chr20 - 2894 4 incomplete-splice_match GPRC5B rna61634 4982 5 33 2055 internal_fragment FALSE canonical 26 161 154 369.664712949 33 8 0 FALSE 0 0 NA B coding 403 1209 156 1364 15 PB.5172.537 chr7 + 1592 10 fusion LOC708891_LOC106999608 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 219 3571.50248495 2 9 0 TRUE 0 0 NA B coding 414 1242 219 1460 15 PB.3579.1 chr5 - 1625 1 genic_intron novelGene_1651 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.11923.1 chrX + 3227 1 antisense novelGene_OPHN1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.10341.1 chr17 - 1484 4 full-splice_match GGACT rna55792 2830 4 50 1296 multi-exon FALSE canonical 27 82 35 710.641963298 2 1 0 FALSE 0 0 NA A coding 153 459 480 938 20 PB.4836.2 chr7 - 1733 8 novel_in_catalog DHRS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 257 189 186.453747616 4 2 0 FALSE 0 0 NA C coding 177 531 214 744 20 PB.12079.2 chrX + 2564 11 novel_in_catalog PHF6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 36 130 1273 305.702469732 5 0 0 FALSE 0 0 NA C coding 365 1095 176 1270 10 PB.1984.4 chr2 + 1543 1 genic_intron novelGene_2641 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.3725.1 chr5 + 859 6 full-splice_match LOC703455 rna20225 915 6 51 5 multi-exon FALSE canonical 48 36869 189 7771.64660802 24 0 0 FALSE 0 0 NA A coding 264 792 24 815 20 PB.1768.1 chr2 + 3944 20 full-splice_match IFT80 rna9421 4332 20 323 65 multi-exon FALSE canonical 40 396 87 212.974176838 2 2 0 FALSE 0 0 NA A coding 777 2331 134 2464 15 PB.12079.1 chrX + 4420 11 full-splice_match PHF6 rna65120 4469 11 42 7 multi-exon FALSE canonical 45 400 327 244.566964245 4 1 0 FALSE 0 0 NA C coding 365 1095 190 1284 15 PB.1984.9 chr2 + 1990 1 incomplete-splice_match PAK2 rna10606 5651 15 2932 730 mono-exon FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.10171.1 chr17 + 1523 1 intergenic novelGene_224 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5135.1 chr7 + 1464 5 full-splice_match YY1 rna27702 6338 5 22 4852 multi-exon FALSE canonical 43 726 753 429.284288089 3 2 0 FALSE 0 0 NA C coding 414 1242 75 1316 70 PB.10551.2 chr19 - 2734 9 novel_not_in_catalog TMEM259 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 7 8 79 485.874469385 3 6 0 FALSE 0 0 NA B coding 277 831 1212 2042 10 PB.11196.1 chr19 + 3776 7 full-splice_match ZNF606 rna60661 4044 7 -41 309 multi-exon FALSE canonical 33 104 436 84.7289796941 2 12 0 FALSE 0 0 NA A coding 792 2376 475 2850 20 PB.5066.4 chr7 + 3037 15 full-splice_match ZC3H14 rna27422 3777 15 145 595 multi-exon FALSE canonical 41 674 116 393.386578317 9 2 0 FALSE 0 0 NA C coding 605 1815 81 1895 40 PB.5172.423 chr7 + 1481 7 novel_not_in_catalog LOC720839 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 258 2919.63302489 3 14 0 TRUE 0 0 NA B coding 91 273 36 308 25 PB.3123.1 chr4 + 6081 9 novel_in_catalog SYNE1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 1491 1904 213.936906587 2 15 0 FALSE 0 0 NA B coding 786 2358 27 2384 90 PB.3164.1 chr4 + 1558 7 full-splice_match FUCA2 rna17180 2019 7 458 3 multi-exon FALSE canonical 43 333 160 150.329637796 62 0 0 FALSE 0 0 NA C coding 378 1134 204 1337 20 PB.4551.1 chr7 - 3742 16 full-splice_match ADAM10 rna24613 3613 16 235 -364 multi-exon FALSE canonical 48 940 246 383.557036176 3 1 0 FALSE 0 0 NA C coding 748 2244 192 2435 90 PB.4223.2 chr6 + 2876 8 full-splice_match RNF14 rna22834 2973 8 89 8 multi-exon FALSE canonical 41 297 375 530.814468529 10 0 0 FALSE 0 0 NA C coding 348 1044 448 1491 50 PB.7680.1 chr12 - 2581 11 full-splice_match BARD1 rna41476 4663 11 7 2075 multi-exon FALSE canonical 7 10 287 68.9347517585 8 2 0 FALSE 0 0 NA A coding 777 2331 130 2460 80 PB.2390.1 chr3 - 2852 1 genic_intron novelGene_2051 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.6421.1 chr10 + 4039 6 full-splice_match GZF1 rna34981 4221 6 166 16 multi-exon FALSE canonical 30 91 1435 127.173110365 14 8 0 FALSE 0 0 NA A coding 713 2139 66 2204 35 PB.10551.1 chr19 - 2746 10 novel_not_in_catalog TMEM259 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 7 8 167 470.989384169 5 6 0 FALSE 0 0 NA B coding 354 1062 992 2053 10 PB.11126.3 chr19 - 3823 5 novel_in_catalog SIGLEC14 novel NA NA NA NA combination_of_known_junctions FALSE canonical 24 71 2724 71.700767081 2 13 0 FALSE 0 0 NA C coding 307 921 26 946 55 PB.11126.2 chr19 - 2517 5 novel_in_catalog SIGLEC14 novel NA NA NA NA combination_of_known_junctions FALSE canonical 24 72 68 63.2534584035 2 4 0 FALSE 0 0 NA C coding 344 1032 32 1063 40 PB.11126.1 chr19 - 2326 7 full-splice_match SIGLEC14 rna60190 1723 7 94 -697 multi-exon FALSE canonical 24 71 1217 60.5309838017 3 10 0 FALSE 0 0 NA C coding 396 1188 70 1257 35 PB.4979.1 chr7 + 2716 12 full-splice_match FNTB rna26855 2710 12 21 -27 multi-exon FALSE canonical 21 46 1025 38.8973006776 14 2 0 FALSE 0 0 NA A coding 437 1311 71 1381 20 PB.10036.2 chr16 - 1554 6 novel_in_catalog GALK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 25 87 178 125.813353822 2 4 0 FALSE 0 0 NA C coding 187 561 566 1126 15 PB.10036.3 chr16 - 1472 7 novel_in_catalog GALK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 25 87 176 115.477270491 2 3 0 FALSE 0 0 NA C coding 264 792 564 1355 10 PB.9490.1 chr16 - 836 3 full-splice_match PFN1 rna51535 1373 3 532 5 multi-exon FALSE canonical 48 4212 491 568.499780123 91 1 0 FALSE 0 0 NA A coding 140 420 167 586 25 PB.10036.1 chr16 - 1300 8 full-splice_match GALK1 rna54302 1868 8 557 11 multi-exon FALSE canonical 25 87 178 107.786826653 11 0 0 FALSE 0 0 NA C coding 392 1176 14 1189 15 PB.4826.1 chr7 + 3753 15 full-splice_match DCAF11 rna26136 2711 15 156 -1198 multi-exon TRUE canonical 32 120 137 398.189653306 4 4 0 FALSE 0 0 NA C coding 546 1638 190 1827 10 PB.12061.2 chrX + 5963 9 novel_not_in_catalog XIAP novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 452 508.813325297 2 4 0 FALSE 0 0 NA C coding 535 1605 371 1975 90 PB.5731.4 chr9 - 3562 2 genic_intron novelGene_664 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 3285 NA 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.7022.2 chr11 - 4493 26 full-splice_match PAN2 rna38227 4577 26 64 20 multi-exon FALSE canonical 39 449 2732 268.702437652 6 1 0 FALSE 0 0 NA A coding 1197 3591 243 3833 20 PB.9973.8 chr16 + 1655 1 genic_intron novelGene_1232 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A coding 110 330 159 488 85 PB.11566.4 chr20 - 2771 6 novel_in_catalog DYNC1LI2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 835 117 782.839063921 2 2 0 FALSE 0 0 NA C coding 287 861 11 871 25 PB.464.1 chr1 - 4239 4 full-splice_match GNG12 rna2519 498 4 12 -3753 multi-exon FALSE canonical 30 275 100 356.838899225 26 1 0 FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.10540.1 chr19 + 1570 8 novel_not_in_catalog BSG novel NA NA NA NA any annotated donor/acceptor FALSE canonical 48 1390 102 326.38474229 470 0 0 TRUE 0 0 NA A coding 273 819 36 854 10 PB.4639.1 chr7 - 3429 10 full-splice_match CD276 rna25058 3455 10 19 7 multi-exon FALSE canonical 0 0 228 147.905375156 14 3 0 FALSE 0 0 NA A coding 534 1602 283 1884 25 PB.2795.1 chr4 + 4107 11 full-splice_match BTN3A2 rna14972 4260 11 145 8 multi-exon FALSE canonical 44 742 538 996.360878397 12 2 0 FALSE 0 0 NA C coding 332 996 112 1107 25 PB.3274.2 chr4 + 1681 6 novel_in_catalog WTAP novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 211 179 870.203424493 5 0 0 FALSE 0 0 NA B coding 151 453 188 640 20 PB.9757.1 chr16 - 2675 1 antisense novelGene_ZNF652_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 10 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.7423.2 chr12 - 3740 14 full-splice_match DDX18 rna40163 3821 14 69 12 multi-exon FALSE canonical 48 995 1277 354.973238428 26 2 0 FALSE 0 0 NA C coding 670 2010 72 2081 15 PB.3524.1 chr5 + 2722 1 genic_intron novelGene_1277 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.8959.1 chr15 - 1739 9 incomplete-splice_match NELFB rna48696 3755 13 2012 4 5prime_fragment FALSE canonical 47 269 373 213.063370855 2 2 0 FALSE 0 0 NA A coding 364 1092 23 1114 30 PB.2324.1 chr3 - 2460 10 full-splice_match ANKMY2 rna12485 2530 10 54 16 multi-exon FALSE canonical 44 657 535 215.383379117 8 6 0 FALSE 0 0 NA A coding 441 1323 166 1488 55 PB.7601.1 chr12 + 3882 2 full-splice_match C12H2orf88 rna41046 1547 2 705 -3040 multi-exon FALSE canonical 28 100 59 NA 18 3 0 FALSE 0 0 NA A non_coding NA NA NA NA 30 PB.10093.1 chr16 - 3547 1 genic NPLOC4 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA B coding 132 396 777 1172 90 PB.10600.1 chr19 + 1572 10 full-splice_match HMG20B rna57302 1620 10 45 3 multi-exon FALSE canonical 2 2 87 343.037898781 54 0 0 FALSE 0 0 NA A coding 317 951 50 1000 25 PB.5005.4 chr7 + 3564 1 genic_intron novelGene_2207 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.10865.1 chr19 - 5912 1 intergenic novelGene_547 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A coding 123 369 2457 2825 70 PB.6679.2 chr10 - 2696 4 novel_not_in_catalog CDPF1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1469 69.9356847396 2 18 0 TRUE 0 0 NA C coding 184 552 1241 1792 35 PB.6527.1 chr10 + 2585 2 full-splice_match SLC35E4 rna35644 1487 2 -335 -763 multi-exon FALSE canonical 6 14 1299 NA 6 2 0 FALSE 0 0 NA A coding 338 1014 717 1730 10 PB.9994.2 chr16 - 2729 10 full-splice_match SLC39A11 rna54128 2761 10 27 5 multi-exon FALSE canonical 33 89 539 60.1913615064 6 1 0 FALSE 0 0 NA C coding 342 1026 89 1114 20 PB.957.6 chr1 + 1660 1 genic_intron novelGene_2459 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A coding 100 300 1121 1420 85 PB.10493.1 chr18 + 3167 4 novel_not_in_catalog TNFRSF11A novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 77 45.607017004 4 2 0 TRUE 0 0 NA A coding 154 462 3 464 65 PB.9994.3 chr16 - 3128 1 genic_intron novelGene_1324 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 13 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.92.1 chr1 + 5691 4 incomplete-splice_match PRDM2 rna488 6795 8 683 421 internal_fragment FALSE canonical 34 151 4550 117.558496077 4 0 0 FALSE 0 0 NA A coding 1472 4416 145 4560 25 PB.2460.2 chr3 - 2950 1 genic_intron novelGene_2178 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.9201.3 chr15 + 6333 1 genic_intron novelGene_851 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.9201.2 chr15 + 1478 12 full-splice_match ERP44 rna49953 1885 12 57 350 multi-exon FALSE canonical 47 357 207 333.908670148 74 0 0 FALSE 0 0 NA A coding 406 1218 151 1368 30 PB.5101.1 chr7 - 2927 9 full-splice_match DDX24 rna27584 3138 9 206 5 multi-exon FALSE canonical 43 1801 1324 624.438948177 172 0 0 FALSE 0 0 NA C coding 856 2568 88 2655 15 PB.2143.4 chr3 + 1440 5 novel_not_in_catalog ACTB novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 73 7053.69654862 4 2 0 TRUE 0 0 NA C coding 257 771 89 859 40 PB.10037.1 chr16 - 2724 4 novel_not_in_catalog H3F3B novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 415 5224.35775957 361 4 0 FALSE 0 0 NA B coding 137 411 134 544 30 PB.10012.2 chr16 - 3117 5 novel_in_catalog NAT9 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 127 721 90.4212364437 2 3 0 FALSE 0 0 NA B coding 150 450 535 984 10 PB.10012.3 chr16 - 1950 8 novel_in_catalog NAT9 novel NA NA NA NA combination_of_known_junctions FALSE canonical 37 106 489 100.359354322 5 1 0 FALSE 0 0 NA B coding 206 618 159 776 35 PB.7747.2 chr12 + 3530 9 novel_not_in_catalog CAB39 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 2 122 1623.16142142 2 1 0 FALSE 0 0 NA C coding 341 1023 166 1188 35 PB.10270.1 chr17 + 3996 2 novel_in_catalog ALG11 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 22 79 76 NA 2 0 0 FALSE 0 0 NA A coding 770 2310 566 2875 90 PB.5172.69 chr7 + 1576 9 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 321 3392.99705275 2 9 0 TRUE 0 0 NA B coding 196 588 854 1441 15 PB.5172.68 chr7 + 1938 9 fusion LOC720839_LOC711872_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 296 3304.60345579 2 6 0 TRUE 0 0 NA B coding 375 1125 690 1814 35 PB.5172.65 chr7 + 1577 9 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 224 3531.85716019 2 12 0 TRUE 0 0 NA B coding 196 588 857 1444 15 PB.5172.64 chr7 + 1472 7 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 333 2699.32639746 2 3 0 TRUE 0 0 NA B coding 108 324 17 340 20 PB.5172.67 chr7 + 1569 8 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 296 3526.80790517 3 16 0 TRUE 0 0 NA B coding 196 588 850 1437 15 PB.5172.66 chr7 + 1566 7 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 377 3353.65457374 2 6 0 TRUE 0 0 NA B coding 196 588 844 1431 15 PB.5172.61 chr7 + 1425 6 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 355 2827.14166606 3 7 0 TRUE 0 0 NA B coding 152 456 17 472 20 PB.172.1 chr1 + 2355 3 full-splice_match PNRC2 rna875 2409 3 28 26 multi-exon FALSE canonical 48 1756 165 1229.49989833 5 0 0 FALSE 0 0 NA A coding 139 417 390 806 10 PB.5172.63 chr7 + 1556 9 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 185 3392.99705275 2 12 0 TRUE 0 0 NA B coding 473 1419 1 1419 15 PB.2462.1 chr3 + 1895 13 incomplete-splice_match KMT2E rna13301 6804 26 34 4875 3prime_fragment FALSE canonical 48 589 316 475.694229521 57 0 0 FALSE 0 0 NA B coding 470 1410 485 1894 70 PB.6168.2 chr10 - 1984 6 full-splice_match CSTF1 rna33714 2192 6 -3 211 multi-exon FALSE canonical 45 399 336 202.143513376 5 0 0 FALSE 0 0 NA A coding 431 1293 369 1661 20 PB.2028.2 chr3 + 2723 11 full-splice_match WDR4 rna10874 2104 11 55 -674 multi-exon FALSE canonical 26 49 283 27.3495886624 3 3 0 FALSE 0 0 NA C coding 266 798 426 1223 10 PB.2028.1 chr3 + 2710 11 full-splice_match WDR4 rna10873 2162 11 69 -617 multi-exon FALSE canonical 31 80 597 26.6645832519 24 1 0 FALSE 0 0 NA C coding 412 1236 32 1267 50 PB.4947.1 chr7 - 3475 1 antisense novelGene_LOC106999447_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 10 NA FALSE 0 0 NA A coding 201 603 542 1144 80 PB.5732.1 chr9 - 2542 9 full-splice_match MTPAP rna31035 2582 9 31 9 multi-exon FALSE canonical 44 431 1336 117.549989366 9 0 0 FALSE 0 0 NA A coding 582 1746 25 1770 40 PB.2288.1 chr3 - 3453 1 novel_in_catalog PRR15 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA C coding 129 387 2494 2880 30 PB.9875.1 chr16 - 1495 5 novel_not_in_catalog LOC106994057 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 29 105 833 348.949853131 5 0 0 TRUE 0 0 NA A non_coding NA NA NA NA 5 PB.10307.1 chr17 - 1586 7 full-splice_match EDNRB rna55607 4863 7 555 2722 multi-exon FALSE canonical 36 753 744 137.171425596 10 0 0 FALSE 0 0 NA A coding 441 1323 262 1584 45 PB.6748.4 chr11 + 3115 20 novel_not_in_catalog USP5 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1783 337.775073089 2 3 0 FALSE 0 0 NA C coding 594 1782 22 1803 20 PB.5283.1 chr8 - 2593 14 novel_not_in_catalog GSR novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1020 737.234698044 5 14 0 TRUE 0 0 NA B coding 314 942 78 1019 70 PB.6748.3 chr11 + 3145 20 full-splice_match USP5 rna36748 3306 20 157 4 multi-exon FALSE canonical 29 356 1972 273.737100153 6 1 0 FALSE 0 0 NA C coding 858 2574 19 2592 20 PB.5283.2 chr8 - 2652 13 novel_not_in_catalog GSR novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1080 691.625621272 33 10 0 TRUE 0 0 NA B coding 469 1407 89 1495 70 PB.11468.1 chr20 + 1535 10 novel_not_in_catalog PHKG2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 47 290.260228071 4 3 0 TRUE 0 0 NA B coding 352 1056 224 1279 15 PB.11468.2 chr20 + 1513 10 novel_not_in_catalog PHKG2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 19 290.260228071 3 3 0 TRUE 0 0 NA B coding 352 1056 203 1258 15 PB.11468.4 chr20 + 1551 10 novel_not_in_catalog PHKG2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 60 290.260228071 20 5 0 TRUE 0 0 NA B coding 352 1056 237 1292 10 PB.3070.2 chr4 - 2906 1 genic_intron novelGene_1797 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.9747.6 chr16 + 3763 39 novel_in_catalog COL1A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 14 35 1595 91.5805656239 3 2 0 FALSE 0 0 NA C coding 245 735 28 762 85 PB.4625.1 chr7 + 510 4 full-splice_match RPLP1 rna24942 511 4 3 -2 multi-exon FALSE canonical 48 21190 275 1394.08608056 3 0 0 FALSE 0 0 NA A coding 114 342 129 470 5 PB.3730.1 chr5 + 1522 1 genic_intron novelGene_2359 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.312.2 chr1 - 2901 8 antisense novelGene_LOC718677_AS novel NA NA NA NA no_subcategory FALSE canonical 15 21 981 92.1845974119 2 1 0 FALSE 0 0 NA A coding 128 384 899 1282 20 PB.5101.3 chr7 - 3599 6 novel_in_catalog DDX24 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 1801 1332 658.908187838 2 11 0 FALSE 0 0 NA C coding 668 2004 96 2099 95 PB.8008.1 chr13 - 1667 7 full-splice_match RTN4 rna43442 1926 7 249 10 multi-exon FALSE canonical 44 5894 164 977.078809513 2 10 0 FALSE 0 0 NA A coding 199 597 131 727 30 PB.7615.1 chr12 - 2662 1 antisense novelGene_NABP1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 17 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.9668.1 chr16 - 1859 2 full-splice_match EVI2B rna52455 2697 2 421 417 multi-exon FALSE canonical 31 436 112 NA 27 2 0 FALSE 0 0 NA C coding 451 1353 134 1486 30 PB.9668.2 chr16 - 1935 3 full-splice_match EVI2B rna52456 2769 3 419 415 multi-exon FALSE canonical 35 187 114 24.4948974278 3 1 0 FALSE 0 0 NA C coding 451 1353 208 1560 30 PB.9668.3 chr16 - 1785 2 novel_not_in_catalog EVI2B novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 30 NA 10 2 1 FALSE 0 0 NA C coding 451 1353 59 1411 30 PB.1541.4 chr2 - 2821 16 novel_not_in_catalog SEMA3B novel NA NA NA NA any annotated donor/acceptor FALSE canonical 10 25 1788 187.773800089 9 4 0 FALSE 0 0 NA B coding 371 1113 1274 2386 25 PB.1541.6 chr2 - 3057 14 novel_not_in_catalog SEMA3B novel NA NA NA NA any annotated donor/acceptor FALSE canonical 7 22 2025 197.527213315 2 6 0 FALSE 0 0 NA B coding 268 804 765 1568 25 PB.6261.1 chr10 + 1540 1 antisense novelGene_RALGAPB_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.1541.2 chr2 - 2895 18 novel_not_in_catalog SEMA3B novel NA NA NA NA any annotated donor/acceptor FALSE canonical 4 4 117 185.932783554 2 3 0 FALSE 0 0 NA B coding 635 1905 527 2431 15 PB.1541.3 chr2 - 2816 17 novel_not_in_catalog SEMA3B novel NA NA NA NA any annotated donor/acceptor FALSE canonical 6 7 724 171.49052452 6 3 0 FALSE 0 0 NA B coding 661 1983 400 2382 25 PB.6493.1 chr10 + 2377 9 novel_not_in_catalog CABIN1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 5 10 27 136.890467163 6 1 0 FALSE 0 0 NA B coding 643 1929 7 1935 5 PB.6493.3 chr10 + 2401 9 novel_not_in_catalog CABIN1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 10 12 49 136.554018615 15 4 0 FALSE 0 0 NA B coding 637 1911 47 1957 0 PB.5039.3 chr7 - 6015 21 novel_in_catalog NEK9 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 568 3244 452.350527799 5 1 0 FALSE 0 0 NA C coding 502 1506 2072 3577 20 PB.6493.5 chr10 + 2709 2 novel_in_catalog CABIN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 422 2126 NA 3 4 0 FALSE 0 0 NA B non_coding NA NA NA NA 5 PB.8852.8 chr14 - 5833 1 novel_in_catalog JAML novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA C coding 122 366 5120 5485 95 PB.1167.1 chr1 - 6022 24 full-splice_match ARID4B rna6323 6101 24 75 4 multi-exon FALSE canonical 46 676 1029 242.767378369 3 1 0 FALSE 0 0 NA C coding 1314 3942 445 4386 25 PB.1752.1 chr2 + 3083 9 full-splice_match LRRC31 rna9307 3043 9 -43 3 multi-exon FALSE non_canonical 0 0 1155 4.79583152331 11 1 0 FALSE 0 0 NA A coding 552 1656 165 1820 20 PB.8312.9 chr14 - 2657 20 novel_not_in_catalog TCIRG1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2327 108.055541274 4 1 0 FALSE 0 0 NA B coding 747 2241 83 2323 15 PB.8312.8 chr14 - 3604 17 novel_in_catalog TCIRG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 12 37 80 101.41498903 2 2 0 FALSE 0 0 NA B coding 471 1413 1082 2494 15 PB.1331.1 chr2 - 3208 8 full-splice_match ILDR1 rna7159 2060 8 30 -1178 multi-exon FALSE canonical 2 3 930 3.87298334621 6 12 0 FALSE 0 0 NA A coding 546 1638 153 1790 80 PB.8852.9 chr14 - 3735 6 novel_in_catalog JAML novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 1101 3177 225.871644967 2 0 0 FALSE 0 0 NA C coding 192 576 172 747 85 PB.8312.1 chr14 - 3005 19 novel_in_catalog TCIRG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 12 37 79 102.063705596 16 4 0 FALSE 0 0 NA B coding 616 1848 1081 2928 15 PB.7684.4 chr12 + 6142 1 genic_intron novelGene_1798 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A coding 99 297 1363 1659 75 PB.8312.2 chr14 - 2649 20 novel_not_in_catalog TCIRG1 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 2314 108.055541274 177 1 0 FALSE 0 0 NA B coding 755 2265 79 2343 15 PB.8312.5 chr14 - 3264 18 novel_in_catalog TCIRG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 12 37 109 103.169763012 6 2 0 FALSE 0 0 NA B coding 533 1599 1111 2709 15 PB.8312.7 chr14 - 2562 17 novel_in_catalog TCIRG1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 1 1 783 116.700471293 2 11 0 FALSE 0 0 NA B coding 391 1173 832 2004 15 PB.2272.1 chr3 - 3559 23 full-splice_match BBS9 rna12173 3729 23 25 145 multi-exon FALSE canonical 39 252 3010 154.230347208 2 2 0 FALSE 0 0 NA C coding 887 2661 490 3150 35 PB.10185.1 chr17 - 2075 6 novel_in_catalog N4BP2L2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1831 1405 965.733400064 28 0 0 FALSE 0 0 NA B coding 583 1749 147 1895 30 PB.2272.2 chr3 - 3666 1 novel_in_catalog BBS9 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.108.1 chr1 - 2623 10 full-splice_match FBXO42 rna579 2957 10 -8 342 multi-exon FALSE canonical 36 181 972 99.2471662064 4 2 0 FALSE 0 0 NA A coding 716 2148 206 2353 15 PB.11660.2 chr20 + 5504 1 novel_in_catalog GABARAPL2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 14 NA FALSE 0 0 NA C coding 125 375 714 1088 15 PB.4314.2 chr6 - 5717 1 genic_intron novelGene_2521 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 18 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.4314.1 chr6 - 2794 1 genic_intron novelGene_2518 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 20 5 NA FALSE 0 0 NA A coding 151 453 552 1004 55 PB.11660.1 chr20 + 947 4 full-splice_match GABARAPL2 rna62861 992 4 41 4 multi-exon FALSE canonical 48 4572 117 2050.86323289 12 0 0 FALSE 0 0 NA C coding 117 351 84 434 15 PB.2764.1 chr4 - 5698 23 novel_not_in_catalog GPLD1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 228 263.077935221 2 11 0 TRUE 0 0 NA A coding 677 2031 461 2491 30 PB.168.1 chr1 - 1549 12 novel_in_catalog GALE novel NA NA NA NA combination_of_known_junctions FALSE canonical 31 111 61 121.061967603 23 0 0 FALSE 0 0 NA B coding 348 1044 159 1202 20 PB.3006.1 chr4 + 5907 23 full-splice_match FAM135A rna16446 5895 23 -18 6 multi-exon FALSE canonical 37 262 1963 323.043340745 2 18 0 FALSE 0 0 NA C coding 1344 4032 628 4659 35 PB.168.3 chr1 - 1450 11 novel_in_catalog GALE novel NA NA NA NA combination_of_known_junctions FALSE canonical 12 21 67 142.730515308 6 0 0 FALSE 0 0 NA B coding 348 1044 73 1116 15 PB.3006.3 chr4 + 3127 4 novel_in_catalog FAM135A novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 424 154 177.78638868 5 5 0 FALSE 0 0 NA C non_coding NA NA NA NA 95 PB.7632.1 chr12 + 4016 10 full-splice_match CASP10 rna41190 2649 10 313 -1680 multi-exon FALSE canonical 37 231 939 140.950345867 4 4 0 FALSE 0 0 NA A coding 520 1560 133 1692 45 PB.8897.16 chr14 + 1813 1 genic_intron novelGene_1984 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.7520.1 chr12 - 3557 16 full-splice_match IFIH1 rna40568 3078 16 -363 -116 multi-exon FALSE canonical 44 500 2817 120.407640954 85 0 0 FALSE 0 0 NA C coding 1025 3075 364 3438 30 PB.11496.4 chr20 - 3123 16 novel_in_catalog VPS35 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical 20 30 1579 807.912742813 3 8 0 FALSE 0 0 NA C coding 755 2265 56 2320 25 PB.293.1 chr1 - 1603 1 genic_intron novelGene_802 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 15 PB.11496.1 chr20 - 2614 17 full-splice_match VPS35 rna62064 3295 17 64 617 multi-exon FALSE canonical 40 544 38 550.622375136 123 0 0 FALSE 0 0 NA C coding 796 2388 36 2423 20 PB.6991.1 chr11 - 2860 5 full-splice_match CBX5 rna38068 2003 5 11 -868 multi-exon FALSE canonical 41 697 115 422.820292796 2 2 0 FALSE 0 0 NA A coding 191 573 158 730 25 PB.9126.9 chr15 - 4081 2 novel_in_catalog GSN novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 605 57 NA 4 2 0 FALSE 0 0 NA C non_coding NA NA NA NA 70 PB.9126.8 chr15 - 1822 1 genic_intron novelGene_419 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.6198.8 chr10 + 5792 12 novel_in_catalog ZNFX1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 591 37 186.745816553 2 2 0 FALSE 0 0 NA C coding 902 2706 86 2791 85 PB.6911.8 chr11 + 1497 8 full-splice_match TMEM106C rna37625 1463 8 -42 8 multi-exon FALSE canonical 37 221 78 722.079635497 2 1 0 FALSE 0 0 NA C coding 249 747 107 853 10 PB.20.19 chr1 - 6312 8 novel_not_in_catalog NADK novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 3052 648.711800417 2 23 0 TRUE 0 0 NA C coding 170 510 3095 3604 25 PB.740.1 chr1 - 2007 4 full-splice_match SLC39A1 rna4036 2140 4 120 13 multi-exon FALSE canonical 40 311 22 247.523736236 55 1 0 FALSE 0 0 NA A coding 324 972 55 1026 30 PB.5974.4 chr9 - 2981 20 full-splice_match HPS1 rna32567 3822 20 18 823 multi-exon FALSE canonical 18 37 246 127.510783858 3 2 0 FALSE 0 0 NA C coding 700 2100 362 2461 20 PB.5974.5 chr9 - 2681 19 novel_in_catalog HPS1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 4 5 2001 140.292551477 2 0 0 FALSE 0 0 NA C coding 649 1947 145 2091 20 PB.5974.6 chr9 - 2940 21 novel_not_in_catalog HPS1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 50 131.871149233 4 3 0 FALSE 0 0 NA C coding 700 2100 333 2432 35 PB.7520.2 chr12 - 2983 14 incomplete-splice_match IFIH1 rna40568 3078 16 -350 445 internal_fragment FALSE canonical 44 500 2804 127.404866469 13 1 0 FALSE 0 0 NA C coding 877 2631 351 2981 55 PB.9126.5 chr15 - 2557 18 full-splice_match GSN rna49550 2871 18 277 37 multi-exon FALSE canonical 40 605 61 2655.081543 187 6 0 FALSE 0 0 NA C coding 731 2193 162 2354 60 PB.9126.4 chr15 - 2623 17 full-splice_match GSN rna49556 2662 17 36 3 multi-exon FALSE canonical 26 364 184 2623.69834394 40 0 0 FALSE 0 0 NA C coding 731 2193 194 2386 15 PB.9126.7 chr15 - 2587 18 novel_not_in_catalog GSN novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 147 2742.32292045 3 2 0 TRUE 0 0 NA C coding 731 2193 159 2351 15 PB.5974.3 chr9 - 2672 19 novel_in_catalog HPS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 22 31 49 131.495247062 9 3 0 FALSE 0 0 NA C coding 667 2001 165 2165 35 PB.20.17 chr1 - 3511 11 novel_in_catalog NADK novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 720 109 438.475769 2 16 0 FALSE 0 0 NA C coding 384 1152 171 1322 25 PB.4102.2 chr6 + 1757 1 genic_intron novelGene_2054 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.10489.1 chr18 - 1808 3 full-splice_match RNF152 rna56850 11943 3 5700 4435 multi-exon FALSE canonical 24 128 298 54.4977063738 2 2 0 FALSE 0 0 NA A coding 203 609 434 1042 55 PB.3948.1 chr6 + 1594 2 novel_not_in_catalog TRAPPC13 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 31 87 347 NA 2 1 0 FALSE 0 0 NA C coding 250 750 469 1218 15 PB.2888.4 chr4 - 3009 15 novel_in_catalog SRPK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 554 52 227.877159891 5 2 0 FALSE 0 0 NA C coding 609 1827 40 1866 80 PB.2811.3 chr4 - 1598 4 novel_in_catalog TRIM27 novel NA NA NA NA combination_of_known_junctions FALSE canonical 45 260 779 267.378009567 5 1 0 FALSE 0 0 NA C coding 263 789 360 1148 80 PB.2811.2 chr4 - 2729 7 full-splice_match TRIM27 rna15231 1887 7 19 -861 multi-exon FALSE canonical 33 76 869 358.463387252 6 0 0 FALSE 0 0 NA C coding 436 1308 354 1661 10 PB.2811.1 chr4 - 2670 8 full-splice_match TRIM27 rna15230 2693 8 24 -1 multi-exon TRUE canonical 45 260 485 230.722777376 112 0 0 FALSE 0 0 NA C coding 513 1539 66 1604 10 PB.11807.1 chrX + 1465 11 full-splice_match PDHA1 rna63448 3325 11 1 1859 multi-exon FALSE canonical 47 1321 165 921.121598922 47 1 0 FALSE 0 0 NA A coding 390 1170 109 1278 30 PB.3663.1 chr5 - 3653 19 full-splice_match BBS7 rna19912 3720 19 63 4 multi-exon FALSE canonical 42 325 1352 123.174672721 2 0 0 FALSE 0 0 NA A coding 715 2145 123 2267 35 PB.3867.1 chr6 + 3952 1 genic_intron novelGene_855 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A coding 106 318 827 1144 90 PB.20.14 chr1 - 6514 6 novel_in_catalog NADK novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 720 127 432.98036907 2 32 0 FALSE 0 0 NA C coding 104 312 3183 3494 40 PB.4616.1 chr7 - 2256 1 genic_intron novelGene_942 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA A coding 150 450 529 978 90 PB.11598.1 chr20 + 3781 10 full-splice_match NFATC3 rna62591 6063 10 -68 2350 multi-exon FALSE canonical 43 219 233 200.761052 27 7 0 FALSE 0 0 NA C coding 1075 3225 131 3355 90 PB.3121.1 chr4 - 3002 2 full-splice_match MYCT1 rna17024 1082 2 44 -1964 multi-exon FALSE canonical 35 435 154 NA 6 2 0 FALSE 0 0 NA A coding 187 561 103 663 35 PB.4610.1 chr7 + 2510 11 full-splice_match MAP2K1 rna24882 2523 11 45 -32 multi-exon FALSE canonical 47 1149 502 330.074234075 15 0 0 FALSE 0 0 NA A coding 393 1179 423 1601 65 PB.7740.11 chr12 - 6701 42 full-splice_match TRIP12 rna41929 10125 42 -31 3455 multi-exon FALSE canonical 44 818 114 738.36576302 2 4 0 FALSE 0 0 NA C coding 2067 6201 164 6364 15 PB.7740.10 chr12 - 6542 41 full-splice_match TRIP12 rna41924 10047 41 50 3455 multi-exon FALSE canonical 44 818 81 758.461600874 16 2 0 FALSE 0 0 NA C coding 2025 6075 131 6205 15 PB.7740.13 chr12 - 3481 22 incomplete-splice_match TRIP12 rna41924 10047 41 50 6516 internal_fragment FALSE canonical 44 818 81 629.282130685 2 1 0 FALSE 0 0 NA C coding 1117 3351 131 3481 25 PB.7146.2 chr11 - 1697 3 full-splice_match LUM rna38814 1574 3 57 -180 multi-exon FALSE canonical 32 1787 925 52.4976189936 188 1 0 FALSE 0 0 NA A coding 338 1014 64 1077 15 PB.12071.7 chrX - 4146 9 full-splice_match ELF4 rna65046 4176 9 17 13 multi-exon FALSE canonical 17 30 161 62.0805927807 4 1 0 FALSE 0 0 NA C coding 662 1986 371 2356 20 PB.2871.1 chr4 + 5590 11 novel_not_in_catalog PACSIN1 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 4592 339.9852938 2 6 0 TRUE 0 0 NA A coding 357 1071 1616 2686 10 PB.2888.3 chr4 - 2788 6 incomplete-splice_match SRPK1 rna15790 4352 16 1491 73 5prime_fragment FALSE canonical 46 552 417 165.626084902 2 0 0 FALSE 0 0 NA C coding 116 348 252 599 15 PB.1116.2 chr1 + 1788 4 novel_not_in_catalog CREG1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 517 3598.45355674 3 1 0 FALSE 0 0 NA C coding 217 651 20 670 30 PB.1116.3 chr1 + 2907 4 novel_not_in_catalog CREG1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1331 3934.61408527 2 6 0 FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.1665.6 chr2 - 2826 1 genic_intron novelGene_1868 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 20 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.2888.2 chr4 - 4190 16 full-splice_match SRPK1 rna15790 4352 16 97 65 multi-exon FALSE canonical 41 552 1811 244.384942253 26 2 0 FALSE 0 0 NA C coding 655 1965 29 1993 15 PB.10909.1 chr19 - 3327 14 full-splice_match CLIP3 rna58860 3371 14 42 2 multi-exon FALSE canonical 2 5 588 41.629316593 14 0 0 FALSE 0 0 NA A coding 547 1641 189 1829 5 PB.4725.1 chr7 - 1360 1 genic PLIN1 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 40 PB.4517.1 chr7 - 2771 1 genic_intron novelGene_613 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.7199.3 chr11 + 1689 12 incomplete-splice_match HSP90B1 rna39086 2718 18 -69 1098 3prime_fragment FALSE canonical 47 2626 156 1468.97923743 4 0 0 FALSE 0 0 NA C coding 527 1581 108 1688 65 PB.6730.1 chr11 + 1217 8 full-splice_match CD9 rna36656 1131 8 15 -101 multi-exon FALSE canonical 47 1263 276 700.859472362 28 0 0 FALSE 0 0 NA A coding 228 684 102 785 5 PB.4050.1 chr6 - 2847 1 novel_in_catalog CHD1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA A coding 117 351 2297 2647 95 PB.8692.2 chr14 + 1840 6 novel_in_catalog PLEKHB1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 18 127 528 179.201004461 2 2 0 FALSE 0 0 NA C coding 189 567 96 662 15 PB.6838.1 chr11 - 3765 1 antisense novelGene_ETNK1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 11 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.7250.1 chr11 - 883 7 full-splice_match ARPC3 rna39304 873 7 -19 9 multi-exon FALSE canonical 48 5248 279 1822.17946427 9 0 0 FALSE 0 0 NA A coding 178 534 97 630 45 PB.8289.1 chr14 - 2736 23 full-splice_match CARS rna44830 2684 23 -55 3 multi-exon FALSE canonical 12 31 85 249.635734621 10 1 0 FALSE 0 0 NA C coding 831 2493 61 2553 10 PB.8289.2 chr14 - 2474 22 novel_not_in_catalog CARS novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1430 223.854863695 2 2 0 TRUE 0 0 NA C coding 474 1422 47 1468 10 PB.8289.3 chr14 - 2938 21 novel_in_catalog CARS novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 362 1172 183.989130114 2 17 0 FALSE 0 0 NA C coding 694 2082 27 2108 25 PB.2993.2 chr4 - 1591 1 genic_intron novelGene_1173 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.479.1 chr1 - 3170 1 novel_in_catalog ZZZ3 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA B non_coding NA NA NA NA 95 PB.5172.408 chr7 + 1526 7 novel_not_in_catalog LOC720839 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 373 2919.63302489 12 7 0 TRUE 0 0 NA B coding 360 1080 397 1476 15 PB.5172.409 chr7 + 1565 9 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 316 3661.52632109 2 24 0 TRUE 0 0 NA B coding 465 1395 36 1430 15 PB.1450.2 chr2 + 1479 1 intergenic novelGene_1437 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 35 PB.3960.1 chr6 + 1477 9 full-splice_match CCNB1 rna21542 2039 9 54 508 multi-exon FALSE canonical 36 748 308 202.175666192 19 0 0 FALSE 0 0 NA A coding 433 1299 117 1415 25 PB.8987.1 chr15 - 2706 1 full-splice_match LOC106993576 rna48909 3308 1 92 510 mono-exon FALSE canonical NA NA NA NA 15 2 NA FALSE 0 0 NA A coding 60 180 215 394 65 PB.5172.406 chr7 + 1468 6 novel_not_in_catalog LOC720839 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 390 2880.13558709 3 10 0 TRUE 0 0 NA B coding 133 399 36 434 20 PB.5172.407 chr7 + 1517 6 novel_not_in_catalog LOC720839 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 316 3070.02915296 2 17 0 TRUE 0 0 NA B coding 157 471 36 506 25 PB.5172.400 chr7 + 1561 9 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 350 3581.15330585 2 12 0 TRUE 0 0 NA B coding 196 588 838 1425 15 PB.2639.1 chr3 + 1450 3 full-splice_match GIMAP1 rna14225 1557 3 99 8 multi-exon FALSE canonical 44 550 129 15.4919333848 29 0 0 FALSE 0 0 NA A coding 306 918 87 1004 25 PB.5172.402 chr7 + 1571 8 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 373 3623.1896169 4 12 0 TRUE 0 0 NA B coding 196 588 847 1434 15 PB.1637.1 chr2 + 2746 7 full-splice_match SEC22C rna8798 6337 7 46 3545 multi-exon FALSE canonical 28 101 100 151.667399266 12 1 0 FALSE 0 0 NA A coding 303 909 128 1036 90 PB.8987.2 chr15 - 5915 2 novel_in_catalog RXRA novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 278 2295 NA 2 3 0 FALSE 0 0 NA A coding 233 699 1742 2440 85 PB.55.1 chr1 + 5663 1 novel_in_catalog LOC106999872 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA A coding 118 354 1912 2265 90 PB.7353.4 chr11 + 3643 5 novel_in_catalog OGFOD2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 13 19 197 56.2938717802 2 3 0 FALSE 0 0 NA B coding 215 645 9 653 15 PB.9756.1 chr16 + 1885 1 intergenic novelGene_860 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.4883.4 chr7 + 3599 14 novel_not_in_catalog PRPF39 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 35 186 1974 312.113761311 2 16 0 FALSE 0 0 NA C coding 273 819 2087 2905 35 PB.2595.3 chr3 + 2993 1 novel_in_catalog TBXAS1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 5 2 NA FALSE 0 0 NA C coding 12 36 406 441 80 PB.7353.2 chr11 + 1765 7 novel_not_in_catalog OGFOD2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 811 56.7186036499 10 3 1 TRUE 0 0 NA B coding 268 804 24 827 15 PB.7162.2 chr11 + 1531 1 genic_intron novelGene_1753 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A coding 101 303 152 454 55 PB.7162.1 chr11 - 3460 5 novel_not_in_catalog TMCC3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 207 116.43882514 2 13 0 TRUE 0 0 NA B coding 446 1338 219 1556 35 PB.9640.1 chr16 + 1978 8 full-splice_match PIPOX rna52360 2379 8 135 266 multi-exon FALSE canonical 13 305 740 192.010416384 3 1 0 FALSE 0 0 NA A coding 390 1170 81 1250 75 PB.4717.1 chr7 + 3080 4 full-splice_match AEN rna25531 1524 4 21 -1577 multi-exon FALSE canonical 30 90 871 16.2172747402 40 2 0 FALSE 0 0 NA C coding 325 975 131 1105 35 PB.4717.2 chr7 + 5555 3 novel_in_catalog AEN novel NA NA NA NA combination_of_known_junctions TRUE canonical 30 90 3345 14.4913767462 3 8 0 FALSE 0 0 NA C coding 199 597 142 738 35 PB.4717.3 chr7 + 3218 5 novel_not_in_catalog AEN novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 67 53.3947562968 2 2 0 FALSE 0 0 NA C coding 325 975 262 1236 15 PB.9263.3 chr15 - 1626 9 novel_not_in_catalog CREB3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1006 426.355485481 2 1 0 FALSE 0 0 NA C coding 417 1251 223 1473 20 PB.10910.1 chr19 + 1467 6 full-splice_match TBCB rna58872 1453 6 -20 6 multi-exon FALSE canonical 44 650 1122 403.576510714 2 1 0 FALSE 0 0 NA A coding 244 732 576 1307 35 PB.9263.1 chr15 - 1388 9 full-splice_match CREB3 rna50245 1521 9 243 -110 multi-exon FALSE canonical 44 565 921 278.786656783 28 1 0 FALSE 0 0 NA C coding 372 1116 138 1253 15 PB.5611.1 chr8 + 1184 7 full-splice_match CYC1 rna30309 1689 7 498 7 multi-exon FALSE canonical 35 156 147 1856.80774449 24 0 0 FALSE 0 0 NA A coding 325 975 19 993 30 PB.8580.1 chr14 - 4060 2 genic_intron novelGene_926 novel NA NA NA NA no_subcategory TRUE canonical 0 0 2736 NA 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.1568.1 chr2 - 1691 9 full-splice_match P4HTM rna8458 1683 9 -12 4 multi-exon FALSE canonical 41 170 872 380.621859593 11 2 0 FALSE 0 0 NA C coding 493 1479 13 1491 15 PB.1813.1 chr2 - 2917 1 genic_intron novelGene_2335 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.6746.1 chr11 - 1464 9 full-splice_match MLF2 rna36727 1199 9 -137 -128 multi-exon FALSE canonical 47 608 146 554.062270869 104 0 0 FALSE 0 0 NA A coding 248 744 175 918 65 PB.2026.1 chr3 + 942 8 full-splice_match U2AF1 rna10859 975 8 26 7 multi-exon FALSE canonical 38 371 655 300.093318819 5 0 0 FALSE 0 0 NA C coding 240 720 81 800 30 PB.10820.1 chr19 + 976 5 full-splice_match CCDC124 rna58322 1006 5 16 14 multi-exon FALSE canonical 21 43 507 247.362082786 3 3 0 FALSE 0 0 NA A coding 223 669 44 712 25 PB.2026.2 chr3 + 2844 1 novel_in_catalog U2AF1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 10 PB.1629.5 chr2 - 2953 6 novel_in_catalog SNRK novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 741 72 628.935608787 2 7 0 FALSE 0 0 NA C coding 360 1080 241 1320 75 PB.7882.1 chr13 + 2860 5 novel_in_catalog RAB10 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 2704 394 255.003921538 2 0 0 FALSE 0 0 NA C coding 118 354 122 475 10 PB.10682.17 chr19 - 1742 13 novel_not_in_catalog MYO1F novel NA NA NA NA any annotated donor/acceptor FALSE canonical 29 251 157 155.637399104 2 0 0 TRUE 0 0 NA B coding 519 1557 155 1711 30 PB.10682.16 chr19 - 2714 15 novel_not_in_catalog MYO1F novel NA NA NA NA any annotated donor/acceptor FALSE canonical 29 251 145 148.785079897 6 5 0 TRUE 0 0 NA B coding 537 1611 143 1753 75 PB.10347.1 chr17 - 3275 6 full-splice_match SLC10A2 rna55843 3932 6 653 4 multi-exon FALSE canonical 2 60 666 6.8556546004 6 4 0 FALSE 0 0 NA A coding 348 1044 82 1125 20 PB.3001.1 chr4 + 4333 6 full-splice_match PTP4A1 rna16405 4898 6 557 8 multi-exon FALSE canonical 40 703 151 522.591618762 9 4 0 FALSE 0 0 NA C coding 173 519 599 1117 40 PB.10682.13 chr19 - 3726 27 novel_not_in_catalog MYO1F novel NA NA NA NA any annotated donor/acceptor FALSE canonical 3 3 772 194.303885705 7 0 0 TRUE 0 0 NA B coding 1058 3174 137 3310 35 PB.1629.2 chr2 - 2716 1 incomplete-splice_match SNRK rna8746 5262 8 2538 9 mono-exon FALSE canonical NA NA NA NA 3 7 NA FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.2149.1 chr3 - 1341 8 full-splice_match ZDHHC4 rna11519 1395 8 49 5 multi-exon FALSE canonical 35 139 55 233.306665143 2 0 0 FALSE 0 0 NA A coding 344 1032 243 1274 15 PB.5671.1 chr9 - 3189 1 genic_intron novelGene_267 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA B coding 145 435 1645 2079 85 PB.11466.2 chr20 + 2066 12 full-splice_match PRR14 rna61950 2158 12 89 3 multi-exon FALSE canonical 2 2 167 100.304536288 2 2 0 FALSE 0 0 NA C coding 585 1755 217 1971 15 PB.1871.1 chr2 + 1720 10 full-splice_match MRPL3 rna10015 1418 10 175 -477 multi-exon FALSE canonical 46 733 108 402.170361911 25 1 0 FALSE 0 0 NA A coding 348 1044 17 1060 30 PB.11466.1 chr20 + 1925 12 full-splice_match PRR14 rna61949 2008 12 80 3 multi-exon FALSE canonical 3 4 26 100.09995005 8 2 0 FALSE 0 0 NA C coding 585 1755 76 1830 15 PB.7903.1 chr13 - 2854 2 full-splice_match CCDC121 rna42909 2784 2 -63 -7 multi-exon FALSE canonical 42 171 587 NA 3 1 0 FALSE 0 0 NA A coding 440 1320 220 1539 25 PB.2216.17 chr3 - 5953 1 novel_in_catalog LOC106997425 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA B non_coding NA NA NA NA 65 PB.10732.1 chr19 + 2988 4 novel_not_in_catalog ZNF136 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 43 263 111 70.2780193233 15 1 0 TRUE 0 0 NA A coding 540 1620 109 1728 25 PB.2846.1 chr4 - 2202 7 full-splice_match AGPAT1 rna15583 2257 7 48 7 multi-exon FALSE canonical 15 26 278 137.80058055 3 3 0 FALSE 0 0 NA A coding 283 849 288 1136 25 PB.11648.1 chr20 + 3385 2 intergenic novelGene_1194 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 25 NA 2 4 0 FALSE 0 0 NA B coding 118 354 2288 2641 90 PB.2048.1 chr3 - 1540 3 novel_not_in_catalog KCNJ15 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 10 31 45 161.499226004 3 0 0 FALSE 0 0 NA A coding 375 1125 162 1286 25 PB.745.5 chr1 + 3777 27 novel_not_in_catalog UBAP2L novel NA NA NA NA any annotated donor/acceptor FALSE canonical 3 3 73 320.730416394 4 1 0 FALSE 0 0 NA C coding 1086 3258 117 3374 80 PB.745.6 chr1 + 3807 28 novel_not_in_catalog UBAP2L novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 50 333.853261179 4 4 0 TRUE 0 0 NA C coding 1102 3306 99 3404 80 PB.745.7 chr1 + 3380 25 novel_not_in_catalog UBAP2L novel NA NA NA NA any annotated donor/acceptor FALSE canonical 3 3 39 284.636610435 3 0 0 FALSE 0 0 NA C coding 982 2946 83 3028 10 PB.3331.1 chr5 + 2838 8 full-splice_match ZBTB49 rna18158 2940 8 102 0 multi-exon FALSE canonical 33 64 54 35.9444015112 4 1 0 FALSE 0 0 NA C coding 766 2298 74 2371 25 PB.41.1 chr1 - 4259 4 full-splice_match HES2 rna258 4299 4 32 8 multi-exon FALSE canonical 0 0 140 1.41421356237 2 6 0 FALSE 0 0 NA A coding 173 519 96 614 30 PB.3331.3 chr5 + 3188 1 novel_in_catalog ZBTB49 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA C coding 182 546 2180 2725 35 PB.3331.2 chr5 + 2832 7 novel_in_catalog ZBTB49 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 24 43 1379 48.3218377134 2 6 0 FALSE 0 0 NA C coding 421 1263 122 1384 40 PB.12048.3 chrX - 1752 11 full-splice_match SEPT6 rna64916 1751 11 262 -263 multi-exon FALSE canonical 30 217 1378 787.123878433 12 2 0 FALSE 0 0 NA C coding 427 1281 54 1334 75 PB.12048.2 chrX - 2112 11 full-splice_match SEPT6 rna64915 3551 11 257 1182 multi-exon FALSE canonical 15 242 1383 783.132172752 32 0 0 FALSE 0 0 NA C coding 427 1281 59 1339 30 PB.12048.1 chrX - 1722 1 incomplete-splice_match SEPT6 rna64914 3506 10 1766 19 mono-exon FALSE canonical NA NA NA NA 13 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.745.8 chr1 + 3856 26 novel_in_catalog UBAP2L novel NA NA NA NA combination_of_known_junctions FALSE canonical 12 19 3210 305.334243085 2 2 0 FALSE 0 0 NA C coding 1086 3258 46 3303 15 PB.745.9 chr1 + 3839 26 novel_in_catalog UBAP2L novel NA NA NA NA combination_of_known_junctions FALSE canonical 15 21 3210 305.181912963 4 3 0 FALSE 0 0 NA C coding 1067 3201 46 3246 10 PB.3521.1 chr5 - 2946 1 incomplete-splice_match SLC4A4 rna19077 7576 25 4628 3 mono-exon FALSE canonical NA NA NA NA 7 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 30 PB.5652.3 chr9 - 1494 6 full-splice_match IL15RA rna30596 702 6 -96 -696 multi-exon FALSE canonical 8 12 184 45.912961133 2 1 0 FALSE 0 0 NA C coding 233 699 97 795 40 PB.5652.2 chr9 - 1579 7 full-splice_match IL15RA rna30597 801 7 -91 -687 multi-exon FALSE canonical 8 12 179 41.701318924 8 0 0 FALSE 0 0 NA C coding 266 798 92 889 25 PB.4424.3 chr7 - 3753 9 incomplete-splice_match RASGRP1 rna23999 4939 17 1178 8 5prime_fragment FALSE canonical 33 337 1164 136.330480818 2 3 0 FALSE 0 0 NA B coding 429 1287 10 1296 35 PB.1610.1 chr2 - 3589 20 full-splice_match SACM1L rna8678 3708 20 100 19 multi-exon FALSE canonical 41 687 1199 281.831509949 133 0 0 FALSE 0 0 NA A coding 587 1761 100 1860 25 PB.11815.1 chrX + 941 7 full-splice_match PRDX4 rna63514 965 7 20 4 multi-exon FALSE canonical 39 723 830 467.140235904 4 4 0 FALSE 0 0 NA A coding 271 813 66 878 25 PB.4424.7 chr7 - 3440 1 genic_intron novelGene_342 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A coding 121 363 523 885 50 PB.4424.6 chr7 - 2744 1 novel_in_catalog RASGRP1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA B non_coding NA NA NA NA 65 PB.9458.3 chr16 + 2625 10 novel_in_catalog PAFAH1B1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 474 356 847.409582197 2 2 0 FALSE 0 0 NA C coding 391 1173 549 1721 80 PB.9458.2 chr16 + 1604 12 novel_not_in_catalog PAFAH1B1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 34 1092.56395694 2 1 0 TRUE 0 0 NA C coding 410 1230 271 1500 30 PB.9458.1 chr16 + 1905 11 full-splice_match PAFAH1B1 rna51403 5586 11 5 3676 multi-exon FALSE canonical 41 474 335 803.932211073 58 1 0 FALSE 0 0 NA C coding 410 1230 528 1757 40 PB.3931.4 chr6 + 3420 13 full-splice_match GPBP1 rna21416 3980 13 153 407 multi-exon FALSE canonical 45 628 1594 908.440972216 31 0 0 FALSE 0 0 NA C coding 493 1479 1117 2595 20 PB.9458.6 chr16 + 3135 1 genic PAFAH1B1 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C coding 141 423 1890 2312 35 PB.10828.1 chr19 - 1368 3 full-splice_match LRRC25 rna58369 1965 3 31 566 multi-exon FALSE canonical 28 95 144 43.4971263419 28 3 0 FALSE 0 0 NA A coding 305 915 154 1068 10 PB.9458.4 chr16 + 2639 1 genic_intron novelGene_101 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.6340.2 chr10 + 1611 5 antisense novelGene_LOC107000446_AS novel NA NA NA NA no_subcategory FALSE canonical 9 14 143 63.0793151516 2 0 0 FALSE 0 0 NA B non_coding NA NA NA NA 85 PB.9273.1 chr15 + 3698 11 full-splice_match PIGO rna50304 3742 11 42 2 multi-exon FALSE canonical 32 99 25 100.543522914 27 1 0 FALSE 0 0 NA C coding 1089 3267 27 3293 20 PB.9273.2 chr15 + 4261 10 novel_in_catalog PIGO novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 99 27 98.1223725763 2 28 0 FALSE 0 0 NA C coding 938 2814 29 2842 30 PB.6340.1 chr10 + 2827 8 antisense novelGene_LOC107000446_AS novel NA NA NA NA no_subcategory TRUE canonical 21 33 20 78.3326241103 6 2 0 FALSE 0 0 NA B non_coding NA NA NA NA 85 PB.1105.1 chr1 + 1459 12 full-splice_match NME7 rna6099 1640 12 174 7 multi-exon FALSE canonical 37 433 967 104.033648403 4 0 0 FALSE 0 0 NA A coding 376 1128 80 1207 30 PB.5679.2 chr9 + 1902 14 full-splice_match OPTN rna30684 3401 14 112 1387 multi-exon FALSE canonical 39 820 124 590.706356831 46 1 0 FALSE 0 0 NA C coding 571 1713 136 1848 15 PB.5679.3 chr9 + 2822 1 novel_in_catalog OPTN novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 7 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.9289.1 chr15 - 3588 24 full-splice_match NFX1 rna50412 4695 24 117 990 multi-exon FALSE canonical 35 290 3006 119.762264508 15 1 0 FALSE 0 0 NA C coding 1120 3360 35 3394 25 PB.5679.1 chr9 + 2644 15 novel_not_in_catalog OPTN novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 767 818.472357505 3 1 0 TRUE 0 0 NA C coding 571 1713 876 2588 15 PB.5100.1 chr7 + 3864 6 full-splice_match OTUB2 rna27583 4586 6 29 693 multi-exon FALSE canonical 10 102 179 113.265175584 4 0 0 FALSE 0 0 NA A coding 234 702 177 878 15 PB.9289.6 chr15 - 3155 16 full-splice_match NFX1 rna50417 3645 16 105 385 multi-exon FALSE canonical 35 179 2470 132.389576629 25 1 0 FALSE 0 0 NA C coding 833 2499 47 2545 75 PB.1655.2 chr2 + 3215 9 full-splice_match GORASP1 rna8884 3298 9 78 5 multi-exon FALSE canonical 31 87 95 182.41436347 56 0 0 FALSE 0 0 NA C coding 440 1320 33 1352 45 PB.9289.4 chr15 - 2832 18 incomplete-splice_match NFX1 rna50412 4695 24 124 1739 internal_fragment FALSE canonical 35 313 2451 117.736995036 3 1 0 FALSE 0 0 NA C coding 935 2805 28 2832 50 PB.6956.1 chr11 - 3688 15 full-splice_match TFCP2 rna37855 3604 15 -9 -75 multi-exon FALSE canonical 37 200 832 111.597491011 11 3 0 FALSE 0 0 NA A coding 502 1506 711 2216 20 PB.11529.1 chr20 - 2717 17 full-splice_match BBS2 rna62234 3674 17 949 8 multi-exon FALSE canonical 35 214 303 272.363727394 17 0 0 FALSE 0 0 NA A coding 721 2163 187 2349 25 PB.8088.1 chr13 + 7047 56 novel_not_in_catalog DYSF novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1443 150.366219611 4 5 0 TRUE 0 0 NA B coding 1708 5124 1653 6776 25 PB.5837.1 chr9 + 2541 10 full-splice_match ASCC1 rna31852 1946 10 -85 -510 multi-exon FALSE canonical 37 128 150 242.090892022 4 3 0 FALSE 0 0 NA A coding 357 1071 184 1254 25 PB.7097.4 chr11 + 2895 1 novel_in_catalog MDM2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA C coding 147 441 2225 2665 80 PB.4166.9 chr6 - 2924 21 novel_in_catalog BRD8 novel NA NA NA NA combination_of_known_junctions FALSE canonical 30 110 1023 740.353969396 2 0 0 FALSE 0 0 NA C coding 881 2643 18 2660 90 PB.11736.1 chr20 - 5768 13 novel_in_catalog GALNS novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 149 1205 129.830658937 6 6 0 FALSE 0 0 NA C coding 560 1680 130 1809 5 PB.934.2 chr1 + 1499 1 genic_intron novelGene_2427 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 3 NA FALSE 0 0 NA A coding 106 318 383 700 90 PB.9407.27 chr15 - 2978 1 genic_intron novelGene_1843 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.8553.1 chr14 + 1804 1 genic_intron novelGene_725 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8797.7 chr14 - 2695 6 novel_in_catalog CASP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 536 2142 85.5219270129 12 1 0 FALSE 0 0 NA C coding 162 486 43 528 70 PB.2773.1 chr4 - 2795 1 genic_intron novelGene_570 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.88.1 chr1 + 3004 1 antisense novelGene_DHRS3_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 13 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.2773.2 chr4 - 6534 2 genic_intron novelGene_570 novel NA NA NA NA no_subcategory FALSE canonical 0 0 2686 NA 3 6 0 FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.4946.1 chr7 + 3297 1 full-splice_match LOC106999447 gene13320 888 1 -2290 -119 mono-exon FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.7516.2 chr12 + 1566 8 full-splice_match TANK rna40540 2145 8 120 459 multi-exon FALSE canonical 44 262 53 441.758984063 19 0 0 FALSE 0 0 NA C coding 425 1275 103 1377 60 PB.865.3 chr1 + 6523 5 novel_in_catalog GUK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 431 6077 381.472148394 2 14 0 FALSE 0 0 NA C coding 173 519 5760 6278 50 PB.1535.2 chr2 + 2611 6 novel_in_catalog RASSF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 12 14 285 256.980544011 3 2 0 FALSE 0 0 NA C coding 270 810 996 1805 15 PB.3086.1 chr4 - 3272 1 intergenic novelGene_1881 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 11 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.5106.1 chr7 - 1376 1 intergenic novelGene_2408 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 50 PB.4920.2 chr7 - 1377 5 full-splice_match CNIH1 rna26605 1984 5 58 549 multi-exon FALSE canonical 43 881 145 404.711008004 24 0 0 FALSE 0 0 NA C coding 144 432 65 496 20 PB.11809.1 chrX + 3165 1 antisense novelGene_SH3KBP1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.7516.1 chr12 + 1602 8 full-splice_match TANK rna40537 2128 8 81 445 multi-exon FALSE canonical 38 460 75 391.035803987 29 0 0 FALSE 0 0 NA C coding 425 1275 125 1399 75 PB.3414.1 chr5 - 3502 1 genic TLR6 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.7600.2 chr12 + 3119 13 full-splice_match PMS1 rna41029 3506 13 377 10 multi-exon FALSE canonical 33 120 119 200.84073292 4 0 0 FALSE 0 0 NA C coding 931 2793 140 2932 25 PB.3414.2 chr5 - 2918 1 full-splice_match TLR6 rna18570 2391 1 -69 -458 mono-exon FALSE canonical NA NA NA NA 14 1 NA FALSE 0 0 NA C coding 796 2388 70 2457 35 PB.5079.4 chr7 - 6976 23 novel_not_in_catalog CCDC88C novel NA NA NA NA any annotated donor/acceptor FALSE canonical 16 33 3591 96.036451413 2 2 0 FALSE 0 0 NA B coding 1187 3561 195 3755 20 PB.10873.2 chr19 - 3208 19 full-splice_match CEP89 rna58637 2667 19 70 -611 multi-exon FALSE canonical 32 137 2216 73.3280301113 2 3 0 FALSE 0 0 NA A coding 791 2373 82 2454 85 PB.1821.1 chr2 + 4000 18 full-splice_match GTF3C3 rna9696 2828 18 32 -1204 multi-exon FALSE canonical 42 484 1579 218.362084621 13 2 0 FALSE 0 0 NA A coding 796 2388 257 2644 35 PB.7600.3 chr12 + 2954 12 full-splice_match PMS1 rna41031 2956 12 0 2 multi-exon FALSE canonical 28 46 2597 233.824720678 2 2 0 FALSE 0 0 NA C coding 855 2565 128 2692 35 PB.2398.1 chr3 + 3228 2 full-splice_match BHLHA15 rna12967 3338 2 91 19 multi-exon FALSE canonical 1 1 31 NA 5 3 0 FALSE 0 0 NA A coding 191 573 86 658 20 PB.1883.1 chr2 - 2831 1 genic_intron novelGene_2542 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 7 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.8360.1 chr14 + 1244 10 full-splice_match FIBP rna45180 1280 10 40 -4 multi-exon FALSE canonical 41 173 165 461.389206636 9 2 0 FALSE 0 0 NA A coding 357 1071 81 1151 10 PB.3869.1 chr6 - 2997 15 full-splice_match DAB2 rna21185 4749 15 383 1369 multi-exon FALSE canonical 27 309 1618 538.089211934 2 1 0 FALSE 0 0 NA C coding 770 2310 278 2587 15 PB.12065.1 chrX - 3731 25 full-splice_match SMARCA1 rna65029 4029 25 32 266 multi-exon FALSE canonical 31 585 294 330.090896572 3 0 0 FALSE 0 0 NA A coding 1070 3210 121 3330 30 PB.2916.1 chr4 - 3762 5 full-splice_match KCNK5 rna15900 4657 5 50 845 multi-exon FALSE canonical 21 106 826 54.2494239601 21 3 0 FALSE 0 0 NA A coding 499 1497 362 1858 15 PB.8115.1 chr13 + 4557 18 full-splice_match HK2 rna43947 7106 18 1500 1049 multi-exon FALSE canonical 20 33 1696 46.6797600679 32 2 0 FALSE 0 0 NA C coding 917 2751 432 3182 20 PB.3306.1 chr5 - 1562 6 novel_not_in_catalog SPON2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 38 29.6141857899 17 2 1 FALSE 0 0 NA A coding 331 993 42 1034 25 PB.8115.3 chr13 + 4220 18 novel_not_in_catalog HK2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 2 246 53.8794951721 2 6 0 FALSE 0 0 NA C coding 889 2667 268 2934 60 PB.1840.8 chr2 - 3110 1 genic_intron novelGene_2453 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11479.1 chr20 - 1780 12 full-splice_match BCKDK rna62000 1783 12 -5 8 multi-exon FALSE canonical 23 59 81 252.10712009 44 0 0 FALSE 0 0 NA A coding 371 1113 364 1476 10 PB.11535.9 chr20 + 6646 50 novel_not_in_catalog NLRC5 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 3918 143.223601407 58 12 0 TRUE 0 0 NA B coding 1289 3867 173 4039 15 PB.11535.8 chr20 + 6747 51 novel_not_in_catalog NLRC5 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 3930 145.062055687 3 15 0 TRUE 0 0 NA B coding 1288 3864 188 4051 15 PB.11535.7 chr20 + 6690 50 novel_not_in_catalog NLRC5 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 3935 148.408220797 4 11 0 TRUE 0 0 NA B coding 1289 3867 190 4056 15 PB.1538.1 chr2 + 1999 4 full-splice_match HYAL1 rna8290 2413 4 410 4 multi-exon FALSE canonical 25 513 1124 18.1107702763 2 2 0 FALSE 0 0 NA A coding 450 1350 90 1439 20 PB.11535.5 chr20 + 5689 8 novel_in_catalog NLRC5 novel NA NA NA NA combination_of_known_junctions FALSE canonical 33 253 613 131.935590346 3 18 0 FALSE 0 0 NA B coding 720 2160 190 2349 85 PB.11535.4 chr20 + 3002 4 novel_in_catalog NLRC5 novel NA NA NA NA combination_of_known_junctions FALSE canonical 33 318 1788 163.716217889 2 3 0 FALSE 0 0 NA B coding 150 450 190 639 80 PB.11535.3 chr20 + 3189 4 novel_in_catalog NLRC5 novel NA NA NA NA combination_of_known_junctions FALSE canonical 33 356 484 152.581125963 2 12 0 FALSE 0 0 NA B coding 130 390 190 579 75 PB.330.1 chr1 - 1503 1 incomplete-splice_match FOXJ3 rna1720 5181 12 3667 12 mono-exon FALSE canonical NA NA NA NA 16 0 NA FALSE 0 0 NA B non_coding NA NA NA NA 30 PB.11535.1 chr20 + 6643 47 novel_not_in_catalog NLRC5 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 3905 132.604675634 3 17 0 TRUE 0 0 NA B coding 1220 3660 207 3866 15 PB.635.1 chr1 - 1094 7 full-splice_match BCAS2 rna3433 1315 7 44 177 multi-exon FALSE canonical 48 1684 443 94.2443632267 2 6 0 FALSE 0 0 NA C coding 225 675 25 699 40 PB.11064.1 chr19 + 749 6 full-splice_match SEPW1 rna59754 731 6 -22 4 multi-exon FALSE canonical 48 2617 106 2790.64490754 7 1 0 FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.8831.1 chr14 + 2515 7 full-splice_match ZBTB16 rna48016 2350 7 -162 -3 multi-exon FALSE canonical 21 81 331 112.787410645 2 1 0 FALSE 0 0 NA A coding 673 2019 422 2440 75 PB.6065.1 chr9 - 3536 5 full-splice_match PDZD8 rna33080 9587 5 66 5985 multi-exon FALSE canonical 46 366 1460 122.641754717 2 7 0 FALSE 0 0 NA C coding 1112 3336 200 3535 60 PB.10355.1 chr17 + 6257 48 full-splice_match COL4A2 rna55889 6275 48 20 -2 multi-exon FALSE canonical 21 83 234 547.997262767 8 6 0 FALSE 0 0 NA A coding 1415 4245 1170 5414 15 PB.5953.2 chr9 + 2883 1 genic_intron novelGene_1727 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 9 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.7449.1 chr12 - 2952 17 full-splice_match MCM6 rna40254 2873 17 -44 -35 multi-exon FALSE canonical 38 194 214 113.079617969 75 2 0 FALSE 0 0 NA A coding 821 2463 108 2570 20 PB.5493.1 chr8 - 3100 6 full-splice_match RSPO2 rna29818 3141 6 32 9 multi-exon FALSE canonical 0 0 452 60.2992537267 13 0 0 FALSE 0 0 NA A coding 243 729 622 1350 40 PB.2904.4 chr4 + 1890 7 full-splice_match PI16 rna15861 1889 7 3 -4 multi-exon FALSE canonical 33 131 1309 445.865450557 8 1 0 FALSE 0 0 NA C coding 468 1404 25 1428 10 PB.2904.5 chr4 + 2764 5 novel_in_catalog PI16 novel NA NA NA NA combination_of_known_junctions FALSE canonical 35 544 657 355.536214752 5 0 0 FALSE 0 0 NA C coding 463 1389 265 1653 10 PB.2904.6 chr4 + 5967 1 novel_in_catalog PI16 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 5 3 NA FALSE 0 0 NA C coding 99 297 265 561 70 PB.7189.1 chr11 - 2793 1 genic GNPTAB novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 3 8 NA FALSE 0 0 NA B non_coding NA NA NA NA 30 PB.2904.1 chr4 + 2348 6 novel_in_catalog PI16 novel NA NA NA NA combination_of_known_junctions FALSE canonical 35 544 661 318.031444986 10 5 0 FALSE 0 0 NA C coding 463 1389 269 1657 10 PB.2904.2 chr4 + 1296 7 full-splice_match PI16 rna15860 1662 7 360 6 multi-exon FALSE canonical 35 544 416 327.385094346 83 0 0 FALSE 0 0 NA C coding 270 810 24 833 10 PB.8368.2 chr14 + 3009 7 novel_in_catalog RELA novel NA NA NA NA combination_of_known_junctions FALSE canonical 11 16 87 77.6530746333 2 3 0 FALSE 0 0 NA C coding 264 792 81 872 95 PB.8368.1 chr14 + 2505 11 full-splice_match RELA rna45212 2668 11 161 2 multi-exon TRUE canonical 11 16 104 78.9176786278 20 2 0 FALSE 0 0 NA C coding 543 1629 98 1726 15 PB.2904.8 chr4 + 6147 2 novel_in_catalog PI16 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 855 435 NA 5 6 0 FALSE 0 0 NA C coding 189 567 265 831 10 PB.2904.9 chr4 + 2774 6 novel_not_in_catalog PI16 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 11 16 854 453.554847841 4 1 0 FALSE 0 0 NA C coding 249 747 263 1009 10 PB.1543.10 chr2 - 3044 25 novel_not_in_catalog RBM5 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 576 1018.96270786 3 2 0 TRUE 0 0 NA C coding 643 1929 614 2542 20 PB.1543.11 chr2 - 5817 20 novel_in_catalog RBM5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 24 48 4150 1118.67600314 3 5 0 FALSE 0 0 NA C coding 272 816 4503 5318 25 PB.10669.2 chr19 - 2137 7 full-splice_match CD209L2 rna57593 794 7 -97 -1246 multi-exon FALSE canonical 0 0 143 21.2367605816 3 0 0 FALSE 0 0 NA A coding 256 768 98 865 30 PB.1543.14 chr2 - 3213 1 novel_in_catalog RBM5 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 6 NA FALSE 0 0 NA C non_coding NA NA NA NA 45 PB.9749.8 chr16 - 3524 15 novel_not_in_catalog KAT7 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 852 465.020429659 2 3 0 TRUE 0 0 NA C coding 328 984 948 1931 15 PB.7230.1 chr11 - 2617 2 full-splice_match TMEM119 rna39210 2679 2 51 11 multi-exon FALSE canonical 6 36 102 NA 2 8 0 FALSE 0 0 NA A coding 280 840 117 956 15 PB.12175.1 chrUn_NW_014835557v1 + 664 1 intergenic novelGene_12 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 20 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 45 PB.2354.4 chr3 + 1972 8 full-splice_match SRI rna12682 873 8 27 -1126 multi-exon FALSE canonical 41 547 66 1027.09103783 19 2 0 FALSE 0 0 NA C coding 198 594 16 609 25 PB.8797.3 chr14 - 3088 7 novel_in_catalog CASP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 536 2126 81.7006731918 2 3 0 FALSE 0 0 NA C coding 194 582 1751 2332 25 PB.11476.2 chr20 - 1839 15 full-splice_match FUS rna61991 2696 15 852 5 multi-exon FALSE canonical 31 129 1264 239.3491174 48 1 0 FALSE 0 0 NA C coding 533 1599 76 1674 15 PB.1130.1 chr1 - 1676 2 genic_intron novelGene_2635 novel NA NA NA NA no_subcategory FALSE canonical 1 1 37 NA 2 1 0 FALSE 0 0 NA A coding 101 303 348 650 20 PB.1893.4 chr2 - 3171 12 novel_not_in_catalog SATB1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 74 976.384145713 2 1 0 TRUE 0 0 NA C coding 763 2289 244 2532 75 PB.8991.1 chr15 + 3035 12 novel_not_in_catalog BRD3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 53 72.5258574579 28 2 0 FALSE 0 0 NA B coding 726 2178 167 2344 90 PB.1893.6 chr2 - 3688 1 genic_intron novelGene_2552 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1893.7 chr2 - 6468 3 novel_in_catalog SATB1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 1480 1783 88.4985875594 2 16 0 FALSE 0 0 NA C coding 280 840 1334 2173 65 PB.1893.1 chr2 - 3181 1 incomplete-splice_match SATB1 rna10127 6283 11 2688 415 mono-exon FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 20 PB.759.1 chr1 + 1339 6 full-splice_match SLC50A1 rna4155 1349 6 3 7 multi-exon FALSE canonical 44 224 186 129.980767808 6 1 0 FALSE 0 0 NA A coding 221 663 107 769 15 PB.2856.9 chr4 - 2705 18 novel_not_in_catalog RGL2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 12 16 690 323.261504049 2 4 1 FALSE 0 0 NA C coding 337 1011 1243 2253 15 PB.639.1 chr1 + 2954 4 novel_not_in_catalog VANGL1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 26 27 2 6 0 FALSE 0 0 NA A coding 137 411 242 652 25 PB.7683.1 chr12 - 1665 8 full-splice_match PECR rna41508 1837 8 -34 206 multi-exon FALSE canonical 46 1885 227 381.525883788 26 1 0 FALSE 0 0 NA A coding 322 966 47 1012 65 PB.4525.1 chr7 - 1561 1 novel_in_catalog MYO5A novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.6240.1 chr10 - 1705 2 antisense novelGene_SERINC3_AS novel NA NA NA NA no_subcategory FALSE canonical 10 15 364 NA 2 2 0 FALSE 0 0 NA A coding 99 297 45 341 25 PB.5018.2 chr7 + 5730 28 novel_not_in_catalog PAPLN novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 4299 113.688170009 4 20 1 TRUE 0 0 NA C coding 1271 3813 68 3880 40 PB.10349.2 chr17 - 3366 3 novel_in_catalog ARGLU1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 6725 574 680 4 1 0 FALSE 0 0 NA C coding 273 819 228 1046 70 PB.10349.1 chr17 - 1724 4 full-splice_match ARGLU1 rna55858 1923 4 20 179 multi-exon FALSE canonical 48 1190 797 2981.92421098 49 1 0 FALSE 0 0 NA C coding 273 819 225 1043 30 PB.1473.1 chr2 + 915 8 novel_not_in_catalog THOC7 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 57 765.458032814 3 2 0 FALSE 0 0 NA A coding 152 456 195 650 20 PB.7226.1 chr11 - 3832 3 full-splice_match CMKLR1 rna39197 8101 3 10 4259 multi-exon FALSE canonical 28 226 284 16.4924225025 6 2 0 FALSE 0 0 NA A coding 371 1113 364 1476 15 PB.356.1 chr1 + 1461 10 full-splice_match DMAP1 rna1889 1473 10 0 12 multi-exon FALSE canonical 44 341 1350 142.898565423 27 0 0 FALSE 0 0 NA A coding 467 1401 7 1407 10 PB.5482.1 chr8 - 3094 1 genic_intron novelGene_1825 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.10766.3 chr19 + 2933 22 full-splice_match PKN1 rna58132 2957 22 13 11 multi-exon FALSE non_canonical 0 0 1669 503.419308331 101 2 0 FALSE 0 0 NA C coding 950 2850 15 2864 15 PB.10766.1 chr19 + 2946 22 novel_not_in_catalog PKN1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 63 480.153100584 3 2 0 TRUE 0 0 NA C coding 796 2388 491 2878 15 PB.8826.1 chr14 - 1949 6 full-splice_match IL18 rna47939 2352 6 1071 -668 multi-exon FALSE canonical 42 373 273 35.4400902933 3 8 0 FALSE 0 0 NA A coding 193 579 195 773 20 PB.10766.4 chr19 + 3168 21 novel_in_catalog PKN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 12 45 53 469.977659043 5 0 0 FALSE 0 0 NA C coding 725 2175 15 2189 10 PB.7057.1 chr11 - 1574 1 incomplete-splice_match CTDSP2 rna38409 4954 8 3366 15 mono-exon FALSE canonical NA NA NA NA 13 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 45 PB.2216.6 chr3 - 3671 8 fusion IKZF1_LOC106997425 novel NA NA NA NA no_subcategory FALSE canonical 29 408 1039 345.631306452 19 0 0 FALSE 0 0 NA B coding 519 1557 190 1746 65 PB.5550.4 chr8 - 3641 1 genic_intron novelGene_2143 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.9571.1 chr16 + 2845 1 incomplete-splice_match ZNF286A rna52004 5104 4 2251 9 mono-exon FALSE canonical NA NA NA NA 3 6 NA FALSE 0 0 NA A coding 113 339 744 1082 40 PB.5550.3 chr8 - 1367 4 incomplete-splice_match LOC106999939 rna30003 4233 5 101 2765 internal_fragment FALSE canonical 30 574 237 131.354482223 2 0 0 FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.2216.7 chr3 - 3545 7 fusion IKZF1_LOC106997425 novel NA NA NA NA no_subcategory FALSE canonical 0 0 486 441.590307865 12 0 0 TRUE 0 0 NA B coding 405 1215 405 1619 70 PB.5420.1 chr8 - 2511 9 novel_not_in_catalog IMPA1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 39 255 71 212.84736315 6 1 0 FALSE 0 0 NA A coding 277 831 96 926 90 PB.1380.1 chr2 + 1585 7 novel_not_in_catalog HMCES novel NA NA NA NA any annotated donor/acceptor FALSE canonical 3 3 72 183.493869107 5 4 0 FALSE 0 0 NA C coding 354 1062 96 1157 25 PB.725.1 chr1 + 2837 3 genic_intron novelGene_2146 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 267 0 5 9 2 FALSE 0 0 NA B non_coding NA NA NA NA 25 PB.7134.1 chr11 + 3109 5 novel_in_catalog METTL25 novel NA NA NA NA combination_of_known_junctions FALSE canonical 37 126 285 71.4282857137 5 4 0 FALSE 0 0 NA A coding 462 1386 27 1412 85 PB.1226.1 chr2 + 2770 3 full-splice_match C2H3orf38 rna6662 990 3 -332 -1448 multi-exon FALSE canonical 48 571 707 36 3 2 0 FALSE 0 0 NA A coding 327 981 339 1319 35 PB.3300.2 chr4 - 2866 10 novel_in_catalog FAM120B novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 178 90 273.375200046 23 0 0 FALSE 0 0 NA C coding 817 2451 112 2562 40 PB.11716.1 chr20 + 652 5 full-splice_match COX4I1 rna63000 707 5 51 4 multi-exon FALSE canonical 48 6658 31 4874.95794854 6 0 0 FALSE 0 0 NA A coding 169 507 33 539 25 PB.6894.3 chr11 + 2844 1 genic_intron novelGene_883 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.5963.2 chr9 + 1749 11 full-splice_match ZDHHC16 rna32512 1841 11 89 3 multi-exon FALSE canonical 2 2 134 92.8331837222 2 2 0 FALSE 0 0 NA C coding 377 1131 140 1270 20 PB.9543.1 chr16 - 600 1 full-splice_match LOC717105 rna51847 1066 1 465 1 mono-exon FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA A coding 133 399 38 436 80 PB.1258.1 chr2 - 3518 18 novel_in_catalog CBLB novel NA NA NA NA combination_of_known_junctions FALSE canonical 28 51 2408 333.923643967 7 2 0 FALSE 0 0 NA C coding 938 2814 113 2926 15 PB.5172.323 chr7 + 1562 8 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 328 3623.1896169 2 9 0 TRUE 0 0 NA B coding 196 588 839 1426 15 PB.5201.1 chr8 - 2141 1 full-splice_match CLDN23 rna28290 2184 1 28 15 mono-exon FALSE canonical NA NA NA NA 14 3 NA FALSE 0 0 NA A coding 289 867 441 1307 35 PB.928.4 chr1 - 2114 16 full-splice_match TRAF3IP3 rna5078 2145 16 25 6 multi-exon FALSE canonical 29 161 647 438.894064667 14 3 0 FALSE 0 0 NA C coding 551 1653 303 1955 30 PB.471.2 chr1 - 2841 11 full-splice_match ZRANB2 rna2571 3154 11 263 50 multi-exon FALSE canonical 45 582 963 736.93758216 54 1 0 FALSE 0 0 NA C coding 320 960 35 994 25 PB.471.3 chr1 - 3898 10 novel_in_catalog ZRANB2 novel NA NA NA NA combination_of_known_junctions TRUE canonical 46 1329 723 582.698035006 5 0 0 FALSE 0 0 NA C coding 314 942 41 982 30 PB.8603.1 chr14 + 1585 5 full-splice_match CYP2R1 rna46672 1663 5 65 13 multi-exon FALSE canonical 23 92 201 77.7881739084 2 0 0 FALSE 0 0 NA A coding 465 1395 85 1479 55 PB.2241.2 chr3 + 1529 6 full-splice_match COA1 rna12055 832 6 -20 -677 multi-exon FALSE canonical 43 795 228 140.032139168 2 5 0 FALSE 0 0 NA C coding 146 438 114 551 70 PB.11178.3 chr19 - 5395 2 genic LOC106994871 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 2326 NA 3 2 0 TRUE 0 0 NA B coding 109 327 394 720 75 PB.2933.1 chr4 + 3042 10 novel_not_in_catalog TAF8 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1197 143.867995051 2 12 0 TRUE 0 0 NA A coding 310 930 19 948 60 PB.5517.1 chr8 + 3063 22 full-splice_match MTBP rna29916 3103 22 39 1 multi-exon FALSE canonical 25 114 248 47.9687398208 2 1 0 FALSE 0 0 NA A coding 904 2712 50 2761 20 PB.1023.1 chr1 - 1266 5 full-splice_match RGS1 rna5635 1319 5 -11 64 multi-exon FALSE canonical 18 61 298 20.4450483003 9 2 0 FALSE 0 0 NA A coding 209 627 19 645 40 PB.5041.3 chr7 + 1127 1 genic FOS novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 17 0 NA FALSE 0 0 NA C coding 89 267 55 321 15 PB.1258.2 chr2 - 3645 18 full-splice_match CBLB rna6854 6692 18 49 2998 multi-exon FALSE canonical 28 51 2563 330.860998004 16 3 0 FALSE 0 0 NA C coding 938 2814 268 3081 70 PB.173.7 chr1 - 1685 1 genic_intron novelGene_513 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11912.1 chrX + 1404 1 full-splice_match MAGEH1 rna64121 1412 1 36 -28 mono-exon FALSE canonical NA NA NA NA 13 1 NA FALSE 0 0 NA A coding 219 657 216 872 20 PB.2261.1 chr3 + 3529 22 full-splice_match ELMO1 rna12129 3923 22 383 11 multi-exon FALSE canonical 37 184 81 398.899736776 6 1 0 FALSE 0 0 NA C coding 727 2181 155 2335 15 PB.2261.2 chr3 + 1539 11 novel_in_catalog ELMO1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 37 184 50 381.060362672 2 0 0 FALSE 0 0 NA C coding 283 849 124 972 40 PB.2261.3 chr3 + 3573 22 full-splice_match ELMO1 rna12132 3653 22 75 5 multi-exon FALSE canonical 40 395 1909 379.080466392 54 1 0 FALSE 0 0 NA C coding 727 2181 196 2376 15 PB.2261.4 chr3 + 1571 14 novel_in_catalog ELMO1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 434 190 302.148969881 2 0 0 FALSE 0 0 NA C coding 422 1266 264 1529 90 PB.2261.5 chr3 + 3523 16 novel_in_catalog ELMO1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 434 155 289.466751113 2 2 0 FALSE 0 0 NA C coding 491 1473 229 1701 80 PB.197.1 chr1 + 688 3 full-splice_match SH3BGRL3 rna993 1626 3 936 2 multi-exon FALSE canonical 42 529 57 204 21 0 0 FALSE 0 0 NA A non_coding NA NA NA NA 5 PB.11527.2 chr20 - 2868 1 incomplete-splice_match NUDT21 rna62231 4478 7 1602 9 mono-exon FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 35 PB.8587.1 chr14 + 2920 12 full-splice_match UEVLD rna46547 2131 12 1 -790 multi-exon FALSE canonical 43 267 134 105.820602909 12 1 0 FALSE 0 0 NA A coding 470 1410 93 1502 75 PB.8086.3 chr13 - 3407 4 full-splice_match PAIP2B rna43778 828 4 4 -2583 multi-exon FALSE canonical 38 414 176 274.124059506 3 2 0 FALSE 0 0 NA A coding 118 354 203 556 75 PB.11527.1 chr20 - 1848 7 full-splice_match NUDT21 rna62231 4478 7 46 2584 multi-exon TRUE canonical 47 1603 243 493.176439015 11 0 0 FALSE 0 0 NA C coding 227 681 128 808 20 PB.9438.1 chr16 - 777 1 incomplete-splice_match YWHAE rna51343 1878 7 1089 13 mono-exon FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 30 PB.8274.1 chr14 - 1744 5 full-splice_match H19 rna44779 2299 5 550 5 multi-exon FALSE canonical 17 73 766 2259.15094671 2 0 0 FALSE 0 0 NA A coding 108 324 282 605 25 PB.4789.1 chr7 + 1844 16 full-splice_match PARP2 rna25831 1838 16 -9 3 multi-exon FALSE canonical 40 354 1454 226.689214565 20 0 0 FALSE 0 0 NA A coding 570 1710 27 1736 10 PB.562.3 chr1 - 2831 5 full-splice_match EXTL2 rna3089 2752 5 -85 6 multi-exon FALSE canonical 34 165 205 206.719616873 2 3 0 FALSE 0 0 NA C coding 330 990 277 1266 15 PB.562.2 chr1 - 3305 7 novel_not_in_catalog EXTL2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 30 64 450 255.4173056 2 1 0 TRUE 0 0 NA C coding 330 990 750 1739 20 PB.6166.1 chr10 - 1593 9 full-splice_match RTFDC1 rna33709 1641 9 43 5 multi-exon FALSE canonical 48 2195 137 648.714112688 28 1 0 FALSE 0 0 NA C coding 306 918 69 986 5 PB.2289.1 chr3 + 1702 14 novel_not_in_catalog CPVL novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 23 661.759775145 72 1 0 TRUE 0 0 NA C coding 472 1416 151 1566 30 PB.11224.10 chr20 + 3018 11 novel_in_catalog FAM234A novel NA NA NA NA combination_of_known_junctions FALSE canonical 29 147 1246 184.491192202 105 10 0 FALSE 0 0 NA C coding 472 1416 516 1931 5 PB.11224.11 chr20 + 3942 9 novel_in_catalog FAM234A novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 231 2543 176.632386611 2 2 0 FALSE 0 0 NA C coding 221 663 2193 2855 5 PB.11224.12 chr20 + 3460 10 novel_in_catalog FAM234A novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 231 2064 168.949696656 5 1 0 FALSE 0 0 NA C coding 221 663 1714 2376 10 PB.6926.1 chr11 - 2096 17 full-splice_match LMBR1L rna37717 2339 17 220 23 multi-exon FALSE canonical 44 202 1050 190.202523643 6 4 0 FALSE 0 0 NA A coding 489 1467 121 1587 10 PB.5983.2 chr9 - 2831 12 full-splice_match ERLIN1 rna32595 3196 12 15 350 multi-exon FALSE canonical 32 118 85 221.923410212 66 1 0 FALSE 0 0 NA C coding 348 1044 97 1140 25 PB.8860.2 chr14 + 5472 1 novel_in_catalog KMT2A novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 21 NA FALSE 0 0 NA B coding 149 447 61 507 75 PB.123.1 chr1 - 2786 1 genic_intron novelGene_425 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 8 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.5983.4 chr9 - 2913 12 full-splice_match ERLIN1 rna32596 3247 12 -14 348 multi-exon FALSE canonical 30 142 167 216.06249096 40 0 0 FALSE 0 0 NA C coding 348 1044 179 1222 25 PB.7116.1 chr11 + 1420 6 full-splice_match GLIPR1 rna38616 1167 6 63 -316 multi-exon FALSE canonical 45 1133 693 292.829301813 40 1 0 FALSE 0 0 NA C coding 266 798 75 872 45 PB.6977.2 chr11 + 1654 3 novel_not_in_catalog MFSD5 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 20 19.4935886896 5 0 0 TRUE 0 0 NA C coding 450 1350 86 1435 25 PB.5474.3 chr8 - 2635 5 full-splice_match ANKRD46 rna29690 2685 5 45 5 multi-exon FALSE canonical 37 611 49 421.805642447 37 0 0 FALSE 0 0 NA C coding 228 684 179 862 20 PB.4008.1 chr6 + 1553 1 genic_intron novelGene_1535 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.6977.3 chr11 + 1718 2 full-splice_match MFSD5 rna37981 1699 2 -18 -1 multi-exon FALSE canonical 6 7 129 NA 2 0 0 FALSE 0 0 NA C coding 450 1350 147 1496 25 PB.12015.1 chrX - 2964 2 full-splice_match SLC25A53 rna64680 2284 2 -2 -678 multi-exon FALSE canonical 11 20 76 NA 4 2 0 FALSE 0 0 NA A coding 307 921 108 1028 25 PB.4233.1 chr6 + 2703 17 incomplete-splice_match RBM27 rna22895 6539 21 10 3826 3prime_fragment FALSE canonical 44 577 1444 257.697497077 17 2 0 FALSE 0 0 NA B coding 846 2538 166 2703 75 PB.5437.1 chr8 + 3140 7 full-splice_match OTUD6B rna29495 3168 7 83 -55 multi-exon FALSE canonical 43 425 840 168.522995464 14 0 0 FALSE 0 0 NA A coding 293 879 44 922 45 PB.5780.13 chr9 - 3428 11 novel_not_in_catalog NCOA4 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 31 3219.71256481 8 6 2 FALSE 0 0 NA C coding 615 1845 79 1923 15 PB.5215.1 chr8 - 3217 9 incomplete-splice_match MTUS1 rna28354 3981 12 760 4 5prime_fragment FALSE canonical 30 553 534 142.642910795 4 2 0 FALSE 0 0 NA B coding 240 720 411 1130 30 PB.5215.2 chr8 - 3172 9 novel_not_in_catalog MTUS1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 7 21 121 275.537656229 6 1 0 FALSE 0 0 NA B coding 342 1026 68 1093 40 PB.8562.5 chr14 - 3390 2 novel_in_catalog HIPK3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 785 523 NA 3 4 0 FALSE 0 0 NA C coding 366 1098 526 1623 80 PB.8562.2 chr14 - 6067 16 full-splice_match HIPK3 rna46357 7695 16 120 1508 multi-exon FALSE canonical 48 785 536 573.349805965 5 5 0 FALSE 0 0 NA C coding 1194 3582 539 4120 30 PB.8562.3 chr14 - 6200 17 full-splice_match HIPK3 rna46358 7758 17 36 1522 multi-exon FALSE canonical 46 564 2991 663.540503662 2 2 0 FALSE 0 0 NA C coding 1215 3645 623 4267 45 PB.5780.15 chr9 - 3409 10 novel_not_in_catalog NCOA4 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 43 2930.93432202 2 1 1 TRUE 0 0 NA C coding 615 1845 60 1904 15 PB.2054.1 chr3 - 2753 24 novel_in_catalog TTC3 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 12 31 65 875.688871689 5 0 0 FALSE 0 0 NA B coding 867 2601 151 2751 70 PB.5172.366 chr7 + 1569 8 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 375 3623.1896169 11 6 0 TRUE 0 0 NA B coding 196 588 847 1434 15 PB.3104.2 chr4 - 3083 2 incomplete-splice_match ARID1B rna16970 9579 19 4876 1620 5prime_fragment FALSE canonical 42 244 107 NA 2 6 0 FALSE 0 0 NA B coding 609 1827 3 1829 85 PB.3104.1 chr4 - 2592 1 incomplete-splice_match ARID1B rna16970 9579 19 6925 63 mono-exon FALSE canonical NA NA NA NA 4 4 NA FALSE 0 0 NA B non_coding NA NA NA NA 85 PB.9301.1 chr15 + 3215 1 genic MOB3B novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA C non_coding NA NA NA NA 20 PB.7980.1 chr13 + 2611 1 genic_intron novelGene_988 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 100 PB.8423.2 chr14 + 2250 21 full-splice_match NXF1 rna45518 2303 21 51 2 multi-exon FALSE canonical 36 255 1100 370.128356114 4 0 0 FALSE 0 0 NA C coding 619 1857 85 1941 5 PB.8423.3 chr14 + 3950 21 novel_not_in_catalog NXF1 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 2539 388.159760923 4 6 0 TRUE 0 0 NA C coding 296 888 265 1152 5 PB.11142.3 chr19 + 2670 1 genic_intron novelGene_992 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 10 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8423.1 chr14 + 4036 20 novel_in_catalog NXF1 novel NA NA NA NA combination_of_known_junctions TRUE canonical 36 260 3630 366.964575947 82 0 0 FALSE 0 0 NA C coding 296 888 265 1152 5 PB.4228.3 chr6 - 3159 1 antisense novelGene_ARHGAP26_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 13 NA FALSE 0 0 NA A coding 122 366 78 443 90 PB.7509.2 chr12 - 2691 14 incomplete-splice_match BAZ2B rna40488 7457 41 695 4071 internal_fragment FALSE canonical 37 201 2327 328.211821847 2 0 0 FALSE 0 0 NA B coding 812 2436 255 2690 25 PB.4228.1 chr6 - 3276 1 genic_intron novelGene_2291 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 0 NA FALSE 0 0 NA A coding 118 354 960 1313 90 PB.5055.1 chr7 - 2477 20 full-splice_match VIPAS39 rna27309 2479 20 -11 13 multi-exon FALSE canonical 43 389 694 118.579087532 5 0 0 FALSE 0 0 NA A coding 493 1479 64 1542 0 PB.5483.1 chr8 - 1726 1 genic_intron novelGene_1826 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.4228.5 chr6 - 2915 1 genic_intron novelGene_2297 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1989.1 chr2 + 3354 9 novel_not_in_catalog FYTTD1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 48 1555 124 535.077564471 89 0 0 TRUE 0 0 NA A coding 318 954 22 975 25 PB.9907.1 chr16 - 3720 12 full-splice_match PLEKHM1 rna53727 5330 12 61 1549 multi-exon FALSE canonical 30 72 100 63.1189353522 17 2 0 FALSE 0 0 NA C coding 1055 3165 142 3306 35 PB.5503.1 chr8 - 1256 8 full-splice_match EIF3H rna29868 1276 8 11 9 multi-exon FALSE canonical 48 4099 315 880.192024504 31 0 0 FALSE 0 0 NA C coding 352 1056 27 1082 15 PB.7921.1 chr13 - 2675 23 full-splice_match CAPN13 rna42989 2694 23 16 3 multi-exon FALSE canonical 2 11 1119 10.295630141 4 1 0 FALSE 0 0 NA A coding 669 2007 179 2185 30 PB.9907.4 chr16 - 2771 1 novel_in_catalog PLEKHM1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.4888.2 chr7 + 26 1 genic_intron novelGene_1946 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 50 PB.1645.1 chr2 - 7607 2 novel_in_catalog ZNF621 novel NA NA NA NA combination_of_known_junctions FALSE canonical 38 188 879 NA 2 21 0 FALSE 0 0 NA A coding 328 984 3654 4637 65 PB.7509.1 chr12 - 2823 16 novel_in_catalog BAZ2B novel NA NA NA NA combination_of_known_junctions FALSE canonical 36 139 608 355.530589401 2 1 0 FALSE 0 0 NA B coding 849 2547 275 2821 50 PB.8558.2 chr14 + 6544 1 genic LMO2 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 31 NA FALSE 0 0 NA A coding 111 333 5138 5470 70 PB.6203.26 chr10 + 1736 2 novel_in_catalog PREX1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 153 71 NA 3 1 0 FALSE 0 0 NA B coding 121 363 1327 1689 40 PB.1141.2 chr1 - 3112 5 full-splice_match TAF5L rna6234 2344 5 -113 -655 multi-exon FALSE canonical 30 60 162 150.309680327 2 9 0 FALSE 0 0 NA C coding 589 1767 166 1932 60 PB.5172.457 chr7 + 1584 9 fusion LOC708891_LOC721089 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 370 3611.79539841 2 11 0 TRUE 0 0 NA B coding 196 588 870 1457 15 PB.955.5 chr1 + 3267 4 novel_in_catalog SLC45A3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 20 40 1198 81.9756061277 3 0 0 FALSE 0 0 NA C coding 553 1659 241 1899 10 PB.7045.1 chr11 - 1816 1 novel_in_catalog DDIT3 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 6 0 NA FALSE 0 0 NA A coding 108 324 540 863 90 PB.5947.3 chr9 - 3411 18 full-splice_match ALDH18A1 rna32434 3586 18 164 11 multi-exon FALSE canonical 28 99 173 276.824854375 13 1 0 FALSE 0 0 NA C coding 795 2385 202 2586 35 PB.3981.3 chr6 - 1818 2 novel_in_catalog COL4A3BP novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 429 507 NA 3 0 0 FALSE 0 0 NA B coding 120 360 412 771 75 PB.1777.2 chr2 - 2865 7 full-splice_match WWTR1 rna9471 5122 7 92 2165 multi-exon FALSE canonical 7 13 249 170.314415127 2 12 0 FALSE 0 0 NA A coding 400 1200 253 1452 50 PB.3981.1 chr6 - 3132 17 novel_in_catalog COL4A3BP novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 391 641 207.371647049 2 7 0 FALSE 0 0 NA B coding 598 1794 411 2204 35 PB.8976.1 chr15 - 3111 1 genic_intron novelGene_69 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 8 NA FALSE 0 0 NA A coding 111 333 2453 2785 85 PB.11105.1 chr19 + 1643 2 incomplete-splice_match ATF5 rna60043 2078 3 430 5 internal_fragment FALSE canonical 16 57 117 NA 3 1 0 FALSE 0 0 NA A coding 222 666 138 803 5 PB.976.1 chr1 + 1522 1 genic_intron novelGene_2476 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.5134.1 chr7 - 3883 1 genic_intron novelGene_2471 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A coding 101 303 921 1223 90 PB.988.1 chr1 - 3095 6 novel_in_catalog PPP1R12B novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 21 103 777 387.75378786 10 1 1 FALSE 0 0 NA B non_coding NA NA NA NA 35 PB.5545.6 chr8 - 2930 1 genic_intron novelGene_2130 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.5166.2 chr7 - 2798 3 full-splice_match GPR132 rna28027 2994 3 152 44 multi-exon FALSE canonical 18 59 18 9.48683298051 22 0 0 FALSE 0 0 NA A coding 371 1113 126 1238 80 PB.10667.2 chr19 - 1435 11 fusion LOC708980_LOC106994626 novel NA NA NA NA no_subcategory FALSE canonical 13 73 178 162.403817689 25 12 0 TRUE 0 0 NA B coding 358 1074 157 1230 5 PB.10667.1 chr19 - 1390 10 fusion LOC708980_LOC106994626 novel NA NA NA NA no_subcategory FALSE canonical 13 91 831 138.989208214 18 13 0 TRUE 0 0 NA B coding 357 1071 107 1177 5 PB.11125.1 chr19 - 2002 9 full-splice_match SIGLEC5 rna60187 1771 9 -10 -221 multi-exon FALSE canonical 13 43 67 31.7490157328 4 0 0 FALSE 0 0 NA A coding 551 1653 31 1683 30 PB.8952.1 chr14 + 2847 20 novel_not_in_catalog GLB1L2 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 2281 78.249600638 9 2 0 TRUE 0 0 NA B coding 636 1908 35 1942 20 PB.7431.1 chr12 + 3390 1 intergenic novelGene_418 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.4137.1 chr6 - 1756 1 novel_in_catalog AFF4 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA B coding 122 366 1116 1481 80 PB.4137.2 chr6 - 3337 13 novel_in_catalog AFF4 novel NA NA NA NA combination_of_known_junctions FALSE canonical 45 449 367 411.218919798 10 1 0 FALSE 0 0 NA B coding 899 2697 372 3068 75 PB.11119.1 chr19 - 1425 4 full-splice_match LOC719752 rna60109 2433 4 1004 4 multi-exon FALSE canonical 31 108 193 48.9285192909 4 5 0 FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.4288.5 chr6 + 2975 6 novel_not_in_catalog ITK novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1102 231.320124503 4 4 0 TRUE 0 0 NA C coding 260 780 116 895 80 PB.1483.1 chr2 - 5598 26 incomplete-splice_match FLNB rna7969 9405 46 3804 3 5prime_fragment TRUE canonical 32 252 723 283.197810726 2 1 0 FALSE 0 0 NA B coding 1111 3333 807 4139 15 PB.4288.4 chr6 + 2771 6 novel_not_in_catalog ITK novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 998 231.320124503 2 4 0 TRUE 0 0 NA C coding 260 780 127 906 80 PB.5116.1 chr7 + 4011 3 full-splice_match BDKRB2 rna27653 4343 3 328 4 multi-exon FALSE canonical 21 34 74 8 13 6 0 FALSE 0 0 NA A coding 391 1173 114 1286 25 PB.1483.8 chr2 - 1185 1 genic_intron novelGene_1605 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.10709.11 chr19 + 3143 1 full-splice_match LOC106994634 rna57809 1337 1 -1829 23 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A coding 102 306 1236 1541 15 PB.185.2 chr1 + 1373 8 full-splice_match TMEM50A rna927 1794 8 418 3 multi-exon FALSE canonical 43 207 642 871.91054587 8 2 0 FALSE 0 0 NA C coding 157 471 131 601 20 PB.6405.1 chr10 + 1679 4 novel_not_in_catalog DSTN novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 475 3113.87989492 279 1 0 TRUE 0 0 NA A coding 164 492 93 584 20 PB.185.1 chr1 + 2622 7 full-splice_match TMEM50A rna928 2220 7 -30 -372 multi-exon FALSE canonical 48 1555 149 500.012999831 2 3 0 FALSE 0 0 NA C coding 157 471 163 633 35 PB.5597.1 chr8 + 1665 11 full-splice_match GSDMD rna30226 1768 11 96 7 multi-exon FALSE canonical 27 102 1272 228.661321609 23 0 0 FALSE 0 0 NA C coding 484 1452 61 1512 40 PB.4288.1 chr6 + 1582 1 genic ITK novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 14 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.1912.2 chr2 - 3289 9 novel_not_in_catalog AZI2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 70 371.795642793 8 12 1 TRUE 0 0 NA B coding 394 1182 404 1585 30 PB.9697.1 chr16 - 5599 6 full-splice_match SLFN14 rna52569 3975 6 31 -1655 multi-exon FALSE canonical 17 115 2102 57.7321400954 9 4 0 FALSE 0 0 NA A coding 912 2736 199 2934 60 PB.4916.2 chr7 + 1759 14 novel_not_in_catalog PSMC6 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 26 70 301 817.293704858 2 0 0 FALSE 0 0 NA C coding 288 864 520 1383 25 PB.4916.1 chr7 + 1551 14 full-splice_match PSMC6 rna26580 1604 14 48 5 multi-exon FALSE canonical 45 1920 600 473.154308868 50 0 0 FALSE 0 0 NA C coding 389 1167 10 1176 25 PB.4721.16 chr7 + 776 1 antisense novelGene_VAPA_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 9 2 NA FALSE 0 0 NA A coding 210 630 30 659 80 PB.6763.3 chr11 + 3031 15 novel_not_in_catalog PEX5 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1608 230.16298573 2 3 0 TRUE 0 0 NA C coding 581 1743 37 1779 50 PB.6763.2 chr11 + 3112 15 full-splice_match PEX5 rna36801 3268 15 126 30 multi-exon FALSE canonical 7 8 36 195.941317746 2 2 0 FALSE 0 0 NA C coding 602 1806 53 1858 50 PB.6763.1 chr11 + 3242 16 full-splice_match PEX5 rna36798 3379 16 105 32 multi-exon FALSE canonical 7 8 57 223.266656713 4 0 0 FALSE 0 0 NA C coding 639 1917 74 1990 50 PB.5830.2 chr9 + 2708 15 full-splice_match P4HA1 rna31820 2955 15 240 7 multi-exon FALSE canonical 47 599 1256 414.298201782 10 5 0 FALSE 0 0 NA C coding 534 1602 109 1710 35 PB.4288.3 chr6 + 4456 17 full-splice_match ITK rna23150 4397 17 1 -60 multi-exon FALSE canonical 30 306 1539 102.552425617 15 0 0 FALSE 0 0 NA C coding 620 1860 91 1950 35 PB.2277.1 chr3 + 3441 4 full-splice_match KBTBD2 rna12183 3572 4 166 -35 multi-exon FALSE canonical 45 385 56 416.58972623 3 8 0 FALSE 0 0 NA A coding 623 1869 394 2262 15 PB.4288.2 chr6 + 2874 3 novel_not_in_catalog ITK novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 449 346 2 3 0 TRUE 0 0 NA C coding 87 261 132 392 80 PB.2628.1 chr3 + 2771 5 full-splice_match LOC711572 rna14143 2822 5 24 27 multi-exon FALSE canonical 38 93 136 51.4101157361 34 1 0 FALSE 0 0 NA A coding 494 1482 113 1594 95 PB.5172.454 chr7 + 1527 7 fusion LOC720839_LOC711872_LOC721089 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 413 1928.81103273 2 15 0 TRUE 0 0 NA B coding 245 735 743 1477 15 PB.699.2 chr1 - 1208 5 novel_not_in_catalog ENSA novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 24 2437.24044772 2 0 0 TRUE 0 0 NA B coding 121 363 152 514 50 PB.6622.1 chr10 - 2816 1 genic_intron novelGene_1595 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 19 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.2368.1 chr3 - 2524 2 novel_in_catalog PHTF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 41 160 171 NA 2 2 0 FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.699.4 chr1 - 2515 4 novel_not_in_catalog ENSA novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 22 2484.18638592 7 3 0 TRUE 0 0 NA B coding 117 351 146 496 10 PB.11111.1 chr19 - 2920 1 novel_in_catalog LOC719533 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 11 NA FALSE 0 0 NA A coding 470 1410 247 1656 35 PB.2645.2 chr3 + 3869 22 full-splice_match SLC4A2 rna14257 4439 22 561 9 multi-exon FALSE canonical 4 6 52 117.081168426 2 2 0 FALSE 0 0 NA C coding 1229 3687 29 3715 10 PB.8904.1 chr14 - 2801 1 genic CLMP novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 4 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 30 PB.9687.1 chr16 + 3959 20 full-splice_match LIG3 rna52535 3668 20 -11 -280 multi-exon FALSE canonical 27 87 1572 82.6619622317 3 1 0 FALSE 0 0 NA A coding 1009 3027 118 3144 5 PB.11222.1 chr20 + 571 3 full-splice_match HBA2 rna60848 429 3 -34 -108 multi-exon FALSE canonical 44 25362 334 16363 1521 0 0 FALSE 0 0 NA C coding 142 426 35 460 5 PB.11222.2 chr20 + 505 3 fusion HBA1_HBA2 novel NA NA NA NA no_subcategory FALSE canonical 0 0 64 12272.4999898 4475 1 0 FALSE 0 0 NA B coding 110 330 66 395 10 PB.11222.3 chr20 + 583 3 fusion HBA1_HBA2 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 132 0 5 8 1 TRUE 0 0 NA B coding 145 435 38 472 10 PB.4622.1 chr7 - 3527 2 antisense novelGene_PIAS1_AS novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 24 NA 2 1 0 FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.11222.5 chr20 + 523 4 novel_not_in_catalog HBA2 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 238 23777.7624052 2 1 0 TRUE 0 0 NA C coding 125 375 38 412 5 PB.5414.1 chr8 - 2285 1 incomplete-splice_match PAG1 rna29404 10794 9 6137 2373 mono-exon FALSE canonical NA NA NA NA 4 6 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.10589.1 chr19 + 2530 13 novel_not_in_catalog THOP1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1593 312.552395608 11 12 0 FALSE 0 0 NA B coding 468 1404 145 1548 55 PB.5917.1 chr9 + 2872 2 full-splice_match IFIT5 rna32261 2694 2 997 -1175 multi-exon FALSE canonical 40 471 29 NA 32 0 0 FALSE 0 0 NA C coding 482 1446 25 1470 50 PB.10589.3 chr19 + 2922 12 novel_not_in_catalog THOP1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1985 321.07475765 2 15 0 FALSE 0 0 NA B coding 371 1113 313 1425 55 PB.3398.1 chr5 - 2947 1 novel_in_catalog ARAP2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA B non_coding NA NA NA NA 65 PB.1219.1 chr2 + 4130 2 intergenic novelGene_172 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 1769 NA 2 17 0 FALSE 0 0 NA A coding 107 321 797 1117 80 PB.4319.2 chr6 - 3461 12 full-splice_match FBXW11 rna23316 4469 12 227 781 multi-exon FALSE canonical 42 325 184 383.137051197 14 1 1 FALSE 0 0 NA C coding 508 1524 140 1663 75 PB.5898.1 chr9 + 3424 5 full-splice_match MINPP1 rna32211 2781 5 389 -1032 multi-exon FALSE canonical 39 116 660 116.387284529 7 1 0 FALSE 0 0 NA A coding 487 1461 24 1484 10 PB.7800.2 chr12 - 3771 14 fusion LOC106992791_LOC100425941 novel NA NA NA NA no_subcategory FALSE canonical 14 23 1922 138.625394499 2 3 0 FALSE 0 0 NA B coding 732 2196 236 2431 15 PB.1809.2 chr2 + 2953 11 novel_not_in_catalog SATB2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 101 216.235982205 2 1 0 TRUE 0 0 NA C coding 675 2025 188 2212 90 PB.7800.6 chr12 - 2863 15 fusion LOC106992791_LOC100425941 novel NA NA NA NA no_subcategory FALSE canonical 14 23 1700 148.46211638 2 0 0 FALSE 0 0 NA B coding 710 2130 80 2209 45 PB.9404.1 chr15 - 1471 10 fusion GOLM1_LOC693348 novel NA NA NA NA no_subcategory FALSE canonical 22 74 130 502.111541393 34 1 0 TRUE 0 0 NA B coding 394 1182 182 1363 45 PB.9404.2 chr15 - 1484 10 fusion GOLM1_LOC693348 novel NA NA NA NA no_subcategory FALSE canonical 10 25 145 512.271412437 33 0 0 TRUE 0 0 NA B coding 394 1182 197 1378 40 PB.7800.5 chr12 - 2808 15 fusion LOC106992791_LOC100425941 novel NA NA NA NA no_subcategory FALSE canonical 14 23 1624 148.185694316 2 4 0 FALSE 0 0 NA B coding 704 2112 22 2133 40 PB.4248.1 chr6 + 948 1 incomplete-splice_match SLC26A2 rna23004 8099 3 5926 1226 mono-exon FALSE canonical NA NA NA NA 5 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.6566.1 chr10 - 932 4 full-splice_match TXN2 rna35860 1441 4 153 356 multi-exon FALSE canonical 34 250 26 261.03639593 5 0 0 FALSE 0 0 NA C coding 166 498 27 524 75 PB.6566.2 chr10 - 1472 5 full-splice_match TXN2 rna35859 1602 5 128 2 multi-exon FALSE canonical 2 2 54 390.353685777 2 3 0 FALSE 0 0 NA C coding 166 498 213 710 10 PB.8833.1 chr14 + 1824 5 full-splice_match RBM7 rna48026 1724 5 85 -185 multi-exon FALSE canonical 47 268 21 163.91156152 53 0 0 FALSE 0 0 NA A coding 201 603 124 726 35 PB.7795.2 chr12 - 3246 2 novel_in_catalog MYEOV2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 45 1322 84 NA 2 2 0 FALSE 0 0 NA C coding 139 417 1762 2178 20 PB.199.1 chr1 - 1669 6 novel_not_in_catalog ZNF683 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 127 11.7898261226 2 2 0 FALSE 0 0 NA A coding 522 1566 88 1653 10 PB.7457.1 chr12 + 5353 1 genic_intron novelGene_661 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 7 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.2360.8 chr3 - 3054 1 novel_in_catalog DMTF1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 5 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.536.1 chr1 - 3226 1 antisense novelGene_MTF2_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 10 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.2360.6 chr3 - 5505 2 novel_in_catalog DMTF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 722 147 NA 2 7 0 FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.2360.7 chr3 - 3053 12 novel_in_catalog DMTF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 722 992 274.158713157 2 0 0 FALSE 0 0 NA C coding 407 1221 283 1503 85 PB.1755.1 chr2 + 3538 15 novel_not_in_catalog MECOM novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 75 123.866864011 5 1 0 FALSE 0 0 NA B coding 1114 3342 49 3390 75 PB.2360.2 chr3 - 3681 18 full-splice_match DMTF1 rna12721 3790 18 91 18 multi-exon FALSE canonical 46 722 944 263.395140426 12 3 0 FALSE 0 0 NA C coding 761 2283 235 2517 40 PB.2360.3 chr3 - 3865 18 novel_not_in_catalog DMTF1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 39 208 944 334.086815065 2 1 0 FALSE 0 0 NA C coding 495 1485 1205 2689 35 PB.2703.1 chr4 + 1213 6 full-splice_match LY86 rna14569 1497 6 279 5 multi-exon FALSE canonical 4 36 364 131.859774003 2 0 0 FALSE 0 0 NA C coding 188 564 296 859 20 PB.9375.1 chr15 - 3958 8 full-splice_match CARNMT1 rna50968 4177 8 210 9 multi-exon FALSE canonical 37 324 614 126.562237654 2 5 0 FALSE 0 0 NA A coding 410 1230 22 1251 30 PB.2703.2 chr4 + 856 5 novel_in_catalog LY86 novel NA NA NA NA combination_of_known_junctions FALSE canonical 31 192 152 75.2263251794 2 2 0 FALSE 0 0 NA C coding 162 486 17 502 20 PB.4155.1 chr6 + 1391 4 full-splice_match CAMLG rna22491 1521 4 113 17 multi-exon FALSE canonical 48 993 246 480.097906682 33 1 0 FALSE 0 0 NA C coding 296 888 75 962 30 PB.4155.2 chr6 + 1358 3 full-splice_match CAMLG rna22492 1404 3 28 18 multi-exon FALSE canonical 26 101 741 446 2 0 0 FALSE 0 0 NA C coding 274 822 109 930 30 PB.4155.3 chr6 + 1621 3 novel_in_catalog CAMLG novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1894 938 102 2 2 0 FALSE 0 0 NA C coding 134 402 792 1193 30 PB.1074.1 chr1 + 3495 1 antisense novelGene_RABGAP1L_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 6 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.6773.1 chr11 - 2698 10 full-splice_match MFAP5 rna36849 2863 10 160 5 multi-exon FALSE canonical 18 230 377 55.7763390695 6 0 0 FALSE 0 0 NA A coding 170 510 52 561 10 PB.1074.2 chr1 + 3026 1 antisense novelGene_RABGAP1L_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 20 0 NA FALSE 0 0 NA B coding 111 333 759 1091 65 PB.747.15 chr1 + 1744 2 incomplete-splice_match IL6R rna4087 5948 10 1569 2635 internal_fragment FALSE canonical 45 619 13 NA 3 0 0 FALSE 0 0 NA C coding 107 321 521 841 75 PB.747.16 chr1 + 2810 1 incomplete-splice_match IL6R rna4087 5948 10 3131 8 mono-exon FALSE canonical NA NA NA NA 4 4 NA FALSE 0 0 NA C coding 145 435 1802 2236 55 PB.8933.1 chr14 + 2924 9 full-splice_match FLI1 rna48513 3271 9 337 10 multi-exon FALSE canonical 40 495 966 261.03639593 121 1 0 FALSE 0 0 NA C coding 452 1356 138 1493 20 PB.6584.1 chr10 + 1927 2 novel_not_in_catalog LOC698693 novel NA NA NA NA not any annotated donor/acceptor FALSE non_canonical 0 0 1846 NA 2 2 0 FALSE 0 0 NA C coding 194 582 323 904 25 PB.6584.2 chr10 + 2209 1 full-splice_match LOC698693 rna35923 2352 1 131 12 mono-exon FALSE canonical NA NA NA NA 11 3 NA FALSE 0 0 NA C coding 194 582 323 904 30 PB.2340.1 chr3 + 2798 1 genic NDUFA4 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.5434.1 chr8 + 3074 6 novel_in_catalog RIPK2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 31 84 391 74.57211275 2 0 0 FALSE 0 0 NA B coding 294 882 219 1100 60 PB.5172.578 chr7 + 1791 8 genic_intron novelGene_2529 novel NA NA NA NA no_subcategory FALSE canonical 3 3 181 35 2 1 0 FALSE 0 0 NA A coding 377 1131 337 1467 5 PB.685.1 chr1 - 2863 15 novel_not_in_catalog MTMR11 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 3 3 1421 12.409673646 2 1 1 FALSE 0 0 NA A coding 333 999 140 1138 25 PB.5913.1 chr9 - 2767 10 full-splice_match LIPA rna32255 2572 10 -193 -2 multi-exon FALSE canonical 43 1437 319 706.824589272 126 1 0 FALSE 0 0 NA A coding 399 1197 321 1517 35 PB.3273.7 chr4 - 3165 6 novel_not_in_catalog SOD2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2450 6649.71112155 4 3 0 TRUE 0 0 NA C coding 222 666 76 741 35 PB.3273.4 chr4 - 3261 7 novel_not_in_catalog SOD2 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 2576 7122.07027486 2 29 0 TRUE 0 0 NA C coding 222 666 143 808 30 PB.439.1 chr1 + 1493 1 incomplete-splice_match NFIA rna2353 9166 12 6171 1503 mono-exon FALSE canonical NA NA NA NA 65 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.3273.2 chr4 - 981 6 full-splice_match SOD2 rna17767 947 6 -40 6 multi-exon FALSE canonical 48 4280 141 5028.60726245 53 0 0 FALSE 0 0 NA C coding 222 666 119 784 35 PB.3273.3 chr4 - 656 1 incomplete-splice_match SOD2 rna17766 4192 5 3107 430 mono-exon FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 40 PB.5182.1 chr8 - 3318 9 full-splice_match ANGPT2 rna28159 4848 9 25 1505 multi-exon FALSE canonical 25 99 1103 37.907782842 5 1 0 FALSE 0 0 NA A coding 495 1485 305 1789 85 PB.3273.1 chr4 - 2772 1 incomplete-splice_match SOD2 rna17766 4192 5 1415 6 mono-exon FALSE canonical NA NA NA NA 4 6 NA FALSE 0 0 NA C non_coding NA NA NA NA 35 PB.1542.3 chr2 - 1746 9 full-splice_match GNAI2 rna8310 2018 9 -12 284 multi-exon FALSE canonical 48 1126 445 851.725307831 24 3 0 FALSE 0 0 NA C coding 355 1065 143 1207 70 PB.6262.2 chr10 - 3030 1 novel_in_catalog RALGAPB novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.6262.1 chr10 - 5580 30 full-splice_match RALGAPB rna34139 9202 30 471 3151 multi-exon FALSE canonical 37 141 223 273.981751217 2 1 0 FALSE 0 0 NA C coding 1495 4485 254 4738 50 PB.1542.7 chr2 - 6224 1 novel_in_catalog GNAI2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA C coding 133 399 5462 5860 80 PB.1542.4 chr2 - 2817 1 novel_in_catalog GNAI2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 11 NA FALSE 0 0 NA C coding 117 351 1839 2189 65 PB.4129.5 chr6 - 2719 21 novel_in_catalog ACSL6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 140 285 788.201116467 2 2 0 FALSE 0 0 NA C coding 665 1995 408 2402 70 PB.11820.1 chrX + 3273 1 novel_in_catalog ZFX novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 4 NA FALSE 0 0 NA B coding 108 324 2594 2917 60 PB.10384.1 chr18 - 2955 1 genic_intron novelGene_75 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 9 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.4129.1 chr6 - 2630 21 full-splice_match ACSL6 rna22362 6572 21 7 3935 multi-exon FALSE canonical 32 619 185 674.785150993 6 2 0 FALSE 0 0 NA C coding 697 2091 212 2302 55 PB.4129.2 chr6 - 2562 20 novel_in_catalog ACSL6 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 24 100 1130 744.800644468 4 0 0 FALSE 0 0 NA C coding 671 2013 216 2228 35 PB.6502.2 chr10 - 1870 7 novel_not_in_catalog TPST2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 74 348.518292203 36 4 1 FALSE 0 0 NA B coding 377 1131 235 1365 15 PB.1632.1 chr2 + 2199 1 antisense novelGene_NKTR_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 55 PB.5705.1 chr9 - 2968 1 genic_intron novelGene_462 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.3568.1 chr5 - 3768 10 full-splice_match KLHL8 rna19366 5603 10 -19 1854 multi-exon FALSE canonical 38 366 215 129.610956327 15 6 0 FALSE 0 0 NA A coding 620 1860 366 2225 85 PB.6502.4 chr10 - 2031 8 novel_not_in_catalog TPST2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 64 337.004451009 2 3 1 FALSE 0 0 NA B coding 377 1131 395 1525 15 PB.6094.1 chr9 + 2960 1 genic_intron novelGene_2059 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.5096.1 chr7 + 864 2 novel_not_in_catalog TMEM251 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 24 67 40 NA 2 0 0 FALSE 0 0 NA A coding 131 393 57 449 20 PB.9077.1 chr15 - 2941 1 intergenic novelGene_246 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 19 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5172.349 chr7 + 1512 8 novel_not_in_catalog LOC720839 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 352 2879.79218 12 5 0 TRUE 0 0 NA B coding 476 1428 38 1465 25 PB.5172.348 chr7 + 1576 8 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 391 3623.1896169 2 22 0 TRUE 0 0 NA B coding 196 588 861 1448 15 PB.5172.347 chr7 + 1559 7 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 376 3805.58326673 8 19 0 TRUE 0 0 NA B coding 196 588 845 1432 15 PB.11899.4 chrX - 2625 16 incomplete-splice_match SMC1A rna64023 4336 24 22 1689 internal_fragment FALSE canonical 42 438 2012 280.351565004 12 1 0 FALSE 0 0 NA C coding 841 2523 102 2624 60 PB.6375.4 chr10 - 6721 4 novel_not_in_catalog RASSF2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1537 208.360264926 2 51 0 TRUE 0 0 NA C coding 159 477 5512 5988 20 PB.1320.2 chr2 + 3727 1 genic GTF2E1 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.6375.2 chr10 - 2397 1 incomplete-splice_match RASSF2 rna34716 5363 11 2958 9 mono-exon FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 25 PB.6375.3 chr10 - 1407 11 full-splice_match RASSF2 rna34716 5363 11 14 3942 multi-exon FALSE canonical 42 409 473 236.186367092 54 2 0 FALSE 0 0 NA C coding 326 978 98 1075 30 PB.9220.2 chr15 - 2744 20 novel_in_catalog IARS novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 542 124 439.837469982 4 3 0 FALSE 0 0 NA C coding 735 2205 132 2336 90 PB.6375.1 chr10 - 5380 11 novel_not_in_catalog RASSF2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 99 309.875781564 2 7 0 FALSE 0 0 NA C coding 326 978 132 1109 15 PB.2152.1 chr3 - 1551 1 incomplete-splice_match RAC1 rna11527 2366 6 812 4 mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 35 PB.5839.14 chr9 + 2576 13 incomplete-splice_match PSAP rna31862 2869 14 288 5 internal_fragment FALSE canonical 48 5500 1057 6131.43139895 6 0 0 FALSE 0 0 NA B coding 449 1347 91 1437 25 PB.5839.12 chr9 + 2773 14 novel_not_in_catalog PSAP novel NA NA NA NA any annotated donor/acceptor FALSE canonical 32 96 402 7945.49148889 21 0 0 FALSE 0 0 NA B coding 535 1605 28 1632 20 PB.5839.13 chr9 + 6475 13 novel_in_catalog PSAP novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 5500 4954 6773.28945196 2 6 0 FALSE 0 0 NA B coding 267 801 29 829 20 PB.5839.10 chr9 + 2833 13 novel_in_catalog PSAP novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 5995 68 6052.29799332 2 0 0 FALSE 0 0 NA B coding 413 1239 29 1267 20 PB.7957.1 chr13 - 2844 1 novel_in_catalog THUMPD2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA A coding 134 402 11 412 90 PB.4349.1 chr6 + 1237 5 full-splice_match PRELID1 rna23449 1117 5 -114 -6 multi-exon FALSE canonical 48 1592 282 326.142606846 12 1 0 FALSE 0 0 NA A coding 219 657 191 847 20 PB.7982.1 chr13 + 1644 1 genic_intron novelGene_989 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.5172.573 chr7 + 4261 2 novel_not_in_catalog LOC701221 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 2126 NA 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA 50 PB.9361.1 chr15 + 1651 15 novel_in_catalog CBWD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 1 1 1005 378.839015942 10 14 0 FALSE 0 0 NA A coding 314 942 51 992 35 PB.6198.15 chr10 + 2687 1 incomplete-splice_match ZNFX1 rna33813 7448 13 4750 12 mono-exon FALSE canonical NA NA NA NA 18 0 NA FALSE 0 0 NA C coding 352 1056 275 1330 35 PB.8730.1 chr14 - 2981 11 incomplete-splice_match RSF1 rna47388 9967 16 306 6680 internal_fragment FALSE canonical 47 438 188 266.431980062 3 0 0 FALSE 0 0 NA B coding 993 2979 2 2980 65 PB.11307.3 chr20 - 3065 16 novel_in_catalog GLYR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 154 313 543.789481325 4 6 0 FALSE 0 0 NA C coding 472 1416 20 1435 20 PB.11307.1 chr20 - 3676 16 full-splice_match GLYR1 rna61340 3783 16 98 9 multi-exon FALSE canonical 40 406 926 481.165252278 61 6 0 FALSE 0 0 NA C coding 553 1659 21 1679 20 PB.5355.1 chr8 + 1488 4 full-splice_match CHCHD7 rna29081 1552 4 65 -1 multi-exon FALSE canonical 42 639 45 466.047207909 8 2 0 FALSE 0 0 NA A coding 85 255 62 316 15 PB.11307.5 chr20 - 2559 11 novel_in_catalog GLYR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 406 923 462.195845935 2 1 0 FALSE 0 0 NA C coding 368 1104 18 1121 80 PB.11410.2 chr20 - 2758 1 genic_intron novelGene_511 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.4790.4 chr7 - 6065 44 incomplete-splice_match TEP1 rna25836 6409 46 336 8 5prime_fragment FALSE canonical 38 153 3339 169.578890196 3 2 0 FALSE 0 0 NA B coding 1971 5913 38 5950 40 PB.9981.1 chr16 + 1555 9 full-splice_match AMZ2 rna54074 1580 9 19 6 multi-exon FALSE canonical 25 66 49 642.34180932 2 3 0 FALSE 0 0 NA C coding 360 1080 302 1381 15 PB.11216.1 chr19 - 2389 11 full-splice_match EPN1 rna60812 2550 11 156 5 multi-exon FALSE canonical 13 35 1781 250.50349299 2 0 0 FALSE 0 0 NA A coding 576 1728 260 1987 10 PB.38.6 chr1 + 2007 1 genic_intron novelGene_130 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 35 PB.8665.1 chr14 + 1819 1 full-splice_match LOC716090 rna47064 1741 1 0 -78 mono-exon FALSE canonical NA NA NA NA 9 2 NA FALSE 0 0 NA A coding 278 834 796 1629 75 PB.975.1 chr1 - 1595 3 full-splice_match PRELP rna5368 4084 3 8 2481 multi-exon FALSE canonical 23 145 148 82.4984848346 69 0 0 FALSE 0 0 NA A coding 382 1146 165 1310 5 PB.9637.3 chr16 - 3596 14 novel_in_catalog PHF12 novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 128 1443 62.3939099592 11 1 0 FALSE 0 0 NA A coding 986 2958 205 3162 45 PB.3443.1 chr5 - 1334 5 full-splice_match COMMD8 rna18744 1313 5 8 -29 multi-exon FALSE canonical 35 250 74 125.6980509 6 0 0 FALSE 0 0 NA C coding 183 549 9 557 30 PB.3443.2 chr5 - 2800 1 novel_in_catalog COMMD8 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 6 NA FALSE 0 0 NA C coding 106 318 2 319 50 PB.6833.1 chr11 + 1691 8 full-splice_match CMAS rna37220 1727 8 45 -9 multi-exon FALSE canonical 47 790 291 431.427861873 55 0 0 FALSE 0 0 NA A coding 434 1302 32 1333 20 PB.11649.9 chr20 - 3409 24 novel_in_catalog GLG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 1027 1957 363.855740645 2 2 0 FALSE 0 0 NA C coding 980 2940 119 3058 85 PB.5772.11 chr9 + 892 1 genic_intron novelGene_918 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.4836.1 chr7 - 1490 9 full-splice_match DHRS1 rna26195 1452 9 -43 5 multi-exon FALSE canonical 38 257 268 190.486219974 29 0 0 FALSE 0 0 NA C coding 313 939 293 1231 20 PB.9886.1 chr16 + 1886 3 full-splice_match TMUB2 rna53616 1928 3 37 5 multi-exon FALSE canonical 35 168 107 187.499333332 9 0 0 FALSE 0 0 NA A coding 301 903 133 1035 5 PB.3880.2 chr6 - 2990 1 novel_in_catalog OXCT1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 6 5 NA FALSE 0 0 NA C coding 124 372 612 983 75 PB.8252.1 chr14 - 4052 12 novel_in_catalog LMNTD2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 0 0 3272 39.8371685741 2 10 0 FALSE 0 0 NA A coding 442 1326 2592 3917 20 PB.2580.2 chr3 - 4098 2 novel_not_in_catalog CREB3L2 novel NA NA NA NA not any annotated donor/acceptor FALSE non_canonical 0 0 3 NA 4 0 0 TRUE 0 0 NA C non_coding NA NA NA NA 90 PB.3880.1 chr6 - 3283 17 full-splice_match OXCT1 rna21211 3270 17 -18 5 multi-exon FALSE canonical 42 1139 167 446.97427219 42 2 0 FALSE 0 0 NA C coding 520 1560 90 1649 40 PB.4833.5 chr7 + 1559 10 full-splice_match GMPR2 rna26185 1648 10 84 5 multi-exon FALSE canonical 44 222 23 558.765603809 2 0 0 FALSE 0 0 NA C coding 348 1044 59 1102 25 PB.4833.4 chr7 + 3800 9 novel_in_catalog GMPR2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 948 116 383.666521865 2 1 0 FALSE 0 0 NA C coding 194 582 2762 3343 25 PB.4833.6 chr7 + 5665 1 genic GMPR2 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA C coding 134 402 849 1250 90 PB.4658.2 chr7 + 1527 10 full-splice_match NEIL1 rna25190 1814 10 279 8 multi-exon FALSE canonical 23 38 128 161.709616288 6 1 0 FALSE 0 0 NA C coding 390 1170 150 1319 15 PB.4833.3 chr7 + 1700 10 novel_not_in_catalog GMPR2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 390 632.599399304 2 1 0 FALSE 0 0 NA C coding 194 582 666 1247 30 PB.4658.1 chr7 + 1494 10 full-splice_match NEIL1 rna25189 2008 10 507 7 multi-exon FALSE canonical 5 6 94 166.150534155 4 0 0 FALSE 0 0 NA C coding 390 1170 116 1285 15 PB.1040.1 chr1 - 3936 18 full-splice_match RGL1 rna5711 4778 18 84 758 multi-exon FALSE canonical 32 679 1361 211.326761202 3 1 0 FALSE 0 0 NA A coding 768 2304 132 2435 40 PB.6342.11 chr10 - 5644 2 novel_in_catalog SIRPB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 33 200 199 NA 4 3 0 FALSE 0 0 NA C coding 269 807 1590 2396 70 PB.10200.3 chr17 + 3561 2 novel_in_catalog UFM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 917 62 NA 3 2 0 FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.10200.1 chr17 + 1807 6 full-splice_match UFM1 rna55093 2474 6 53 614 multi-exon FALSE canonical 43 682 217 93.674969976 12 0 0 FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.5636.4 chr9 + 3593 14 novel_not_in_catalog ZMYND11 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 22 73 55 1141.64486597 3 3 0 FALSE 0 0 NA B coding 548 1644 75 1718 85 PB.6717.1 chr11 + 1686 4 novel_in_catalog ITFG2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 829 209 258.984555524 6 3 0 FALSE 0 0 NA A coding 178 534 114 647 90 PB.5636.1 chr9 + 4064 15 novel_not_in_catalog ZMYND11 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 75 1199.98499991 3 7 0 TRUE 0 0 NA B coding 601 1803 111 1913 55 PB.2015.2 chr3 - 2882 22 full-splice_match PFKL rna10823 2907 22 16 9 multi-exon FALSE canonical 29 97 135 439.01936176 586 4 0 FALSE 0 0 NA C coding 780 2340 51 2390 20 PB.5636.3 chr9 + 3739 15 novel_not_in_catalog ZMYND11 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 22 73 39 1043.76673639 25 1 0 FALSE 0 0 NA B coding 602 1806 59 1864 85 PB.5636.2 chr9 + 6265 11 novel_not_in_catalog ZMYND11 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 22 73 64 1298.25344213 2 19 0 FALSE 0 0 NA B coding 403 1209 3181 4389 90 PB.2729.1 chr4 - 2755 1 genic_intron novelGene_315 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.10360.1 chr17 + 5698 20 novel_in_catalog ARHGEF7 novel NA NA NA NA combination_of_known_junctions FALSE canonical 29 109 2615 279.619384164 2 7 0 FALSE 0 0 NA B coding 387 1161 1914 3074 25 PB.10360.2 chr17 + 3848 12 incomplete-splice_match ARHGEF7 rna55921 4667 19 813 6 internal_fragment FALSE canonical 29 109 763 177.152476697 2 7 0 FALSE 0 0 NA B coding 401 1203 20 1222 20 PB.4027.1 chr6 + 3759 1 genic_intron novelGene_1673 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 17 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.8897.11 chr14 + 5828 42 novel_in_catalog SORL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 890 3581 439.44738024 29 0 0 FALSE 0 0 NA C coding 1880 5640 65 5704 90 PB.2838.1 chr4 - 1303 11 full-splice_match NELFE rna15542 1420 11 114 3 multi-exon FALSE canonical 43 215 82 316.796464627 10 1 0 FALSE 0 0 NA A coding 380 1140 91 1230 20 PB.11317.1 chr20 + 1586 1 antisense novelGene_USP7_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 13 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1984.1 chr2 + 2581 15 full-splice_match PAK2 rna10605 4032 15 10 1441 multi-exon FALSE canonical 34 191 39 319.502738642 82 0 0 FALSE 0 0 NA C coding 524 1572 67 1638 25 PB.490.3 chr1 + 4304 9 novel_in_catalog PRKACB novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 1 1 815 1212.73410111 2 5 0 FALSE 0 0 NA C coding 357 1071 33 1103 35 PB.6614.2 chr10 + 1838 6 novel_in_catalog GRAP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 30 325 701 173.432984175 2 2 0 FALSE 0 0 NA C coding 256 768 243 1010 40 PB.490.5 chr1 + 2792 1 incomplete-splice_match PRKACB rna2774 4306 9 1505 10 mono-exon FALSE canonical NA NA NA NA 6 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 40 PB.3500.12 chr5 + 2711 1 genic_intron novelGene_1172 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.6484.1 chr10 + 891 4 fusion LOC708547_LOC107000549 novel NA NA NA NA no_subcategory FALSE canonical 0 0 396 5455.86161848 3 7 0 TRUE 0 0 NA A coding 145 435 48 482 25 PB.6484.3 chr10 + 887 5 fusion LOC106992418_LOC708547_LOC107000555 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 394 5030.50951694 10 6 0 TRUE 0 0 NA B coding 122 366 384 749 25 PB.6484.2 chr10 + 885 4 fusion LOC107000575_LOC708547 novel NA NA NA NA no_subcategory FALSE canonical 0 0 390 5324.17636823 3 10 0 TRUE 0 0 NA A coding 240 720 28 747 25 PB.6484.5 chr10 + 889 4 fusion LOC106992418_LOC708547 novel NA NA NA NA no_subcategory FALSE canonical 0 0 394 5443.77314002 4 14 0 TRUE 0 0 NA A coding 144 432 49 480 25 PB.697.1 chr1 + 3088 2 antisense novelGene_MCL1_AS novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 25 NA 40 1 0 FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.6484.7 chr10 + 847 6 fusion LOC107000576_LOC100430606 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 362 1787.3094304 3 15 0 TRUE 0 0 NA A coding 230 690 19 708 25 PB.6484.6 chr10 + 867 4 fusion LOC106992418_LOC708547_LOC107000555 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 384 5443.77314002 2 9 0 TRUE 0 0 NA B coding 144 432 32 463 35 PB.6484.9 chr10 + 867 4 novel_not_in_catalog LOC107000555 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 375 3030.71773677 2 4 0 TRUE 0 0 NA B coding 141 423 39 461 35 PB.6484.8 chr10 + 893 4 novel_not_in_catalog LOC107000555 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 397 2756.96118943 3 1 0 TRUE 0 0 NA B coding 145 435 49 483 30 PB.4256.1 chr6 - 2276 11 full-splice_match RBM22 rna23052 2309 11 28 5 multi-exon FALSE canonical 34 249 804 158.455040942 8 1 0 FALSE 0 0 NA A coding 420 1260 59 1318 20 PB.6215.1 chr10 + 3170 8 full-splice_match NCOA5 rna33900 3256 8 67 19 multi-exon FALSE canonical 26 65 97 225.858362697 12 2 0 FALSE 0 0 NA C coding 579 1737 127 1863 70 PB.662.1 chr1 - 1803 5 full-splice_match SEC22B rna3548 1196 5 -7 -600 multi-exon FALSE canonical 48 1110 215 657.617670079 26 2 0 FALSE 0 0 NA C coding 215 645 141 785 45 PB.6707.1 chr11 - 3744 1 antisense novelGene_WNK1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A coding 126 378 326 703 90 PB.6823.1 chr11 + 928 4 full-splice_match MGST1 rna37107 977 4 40 9 multi-exon FALSE canonical 28 454 66 445.299898945 2 0 0 FALSE 0 0 NA A coding 155 465 99 563 30 PB.1148.2 chr1 - 3232 23 full-splice_match TTC13 rna6260 3277 23 36 9 multi-exon FALSE canonical 35 128 901 216.787914792 4 6 0 FALSE 0 0 NA C coding 860 2580 2 2581 20 PB.1831.3 chr2 - 3575 15 novel_in_catalog PLS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 25 143 1792 34.8137903711 39 0 0 FALSE 0 0 NA B coding 629 1887 39 1925 30 PB.11879.7 chrX - 2908 25 novel_in_catalog GRIPAP1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 12 31 1593 368.585132636 2 3 0 FALSE 0 0 NA B coding 803 2409 31 2439 15 PB.1831.6 chr2 - 3785 16 novel_not_in_catalog PLS1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 7 214 58.7281874401 3 1 0 FALSE 0 0 NA B coding 629 1887 251 2137 35 PB.11993.2 chrX - 3740 17 novel_in_catalog SYTL4 novel NA NA NA NA combination_of_known_junctions TRUE canonical 27 164 117 150.356243635 2 4 0 FALSE 0 0 NA C coding 670 2010 188 2197 20 PB.8484.3 chr14 + 1648 1 antisense novelGene_SMTNL1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A coding 111 333 861 1193 80 PB.8484.2 chr14 + 3086 1 genic_intron novelGene_367 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8484.1 chr14 + 3314 4 full-splice_match UBE2L6 rna45830 1348 4 144 -2110 multi-exon FALSE canonical 42 709 66 138.470213403 33 1 0 FALSE 0 0 NA A coding 152 456 43 498 80 PB.7299.1 chr11 - 2626 12 full-splice_match FBXO21 rna39484 4233 12 54 1553 multi-exon FALSE canonical 43 869 254 332.082820995 66 0 0 FALSE 0 0 NA C coding 621 1863 16 1878 40 PB.8186.2 chr13 - 3655 1 novel_in_catalog MITD1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA B non_coding NA NA NA NA 35 PB.3031.1 chr4 + 2643 1 antisense novelGene_FAM46A_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5872.4 chr9 - 2649 1 genic_intron novelGene_1392 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 17 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11222.18 chr20 + 464 3 incomplete-splice_match HBA1 rna60850 563 4 97 2 internal_fragment FALSE canonical 44 20896 22 1824.49993149 4 3 0 FALSE 0 0 NA B coding 110 330 24 353 10 PB.5172.337 chr7 + 1560 9 fusion LOC708891_LOC711872 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 330 3642.73688317 2 12 0 TRUE 0 0 NA B coding 196 588 846 1433 15 PB.9699.1 chr16 + 3113 1 novel_in_catalog TAF15 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 25 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.6064.1 chr9 - 3944 1 incomplete-splice_match PDZD8 rna33080 9587 5 5639 5 mono-exon FALSE canonical NA NA NA NA 7 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 45 PB.11222.13 chr20 + 574 4 fusion HBA1_HBA2 novel NA NA NA NA no_subcategory TRUE canonical 0 0 202 23808.9750094 2 0 0 TRUE 0 0 NA B coding 142 426 38 463 10 PB.9536.1 chr16 + 3569 19 full-splice_match CNTROB rna51804 3628 19 50 9 multi-exon FALSE canonical 30 118 2102 159.605764307 10 4 0 FALSE 0 0 NA A coding 901 2703 798 3500 15 PB.11222.16 chr20 + 573 4 fusion HBA1_HBA2 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 157 23808.9750094 5 0 0 TRUE 0 0 NA B coding 118 354 111 464 10 PB.2830.1 chr4 - 4081 30 full-splice_match VARS rna15518 4309 30 221 7 multi-exon FALSE canonical 11 13 3617 227.358747358 55 5 0 FALSE 0 0 NA A coding 1264 3792 218 4009 30 PB.11222.14 chr20 + 622 6 novel_not_in_catalog HBA1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 35 11190.3793055 45 5 0 TRUE 0 0 NA B coding 156 468 44 511 10 PB.11222.15 chr20 + 717 2 fusion HBA1_HBA2 novel NA NA NA NA no_subcategory FALSE canonical 0 0 132 NA 5 0 0 FALSE 0 0 NA B coding 141 423 38 460 10 PB.1672.1 chr2 - 1662 8 incomplete-splice_match FETUB rna8979 1837 9 109 66 5prime_fragment FALSE canonical 2 14 201 284.710379157 16 2 0 FALSE 0 0 NA B coding 382 1146 203 1348 25 PB.8759.1 chr14 - 2873 1 genic_intron novelGene_1555 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.10476.5 chr18 - 1797 1 novel_in_catalog TCF4 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.9218.1 chr15 + 4063 10 full-splice_match TSTD2 rna50010 4395 10 323 9 multi-exon FALSE canonical 41 229 1394 105.489335954 9 3 0 FALSE 0 0 NA A coding 516 1548 143 1690 40 PB.697.2 chr1 + 3335 1 antisense novelGene_MCL1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.1569.1 chr2 - 1642 2 genic_intron novelGene_1741 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 1034 NA 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.1863.1 chr2 - 1673 7 full-splice_match SRPRB rna9977 958 7 -13 -702 multi-exon FALSE canonical 46 598 167 336.787766999 48 0 0 FALSE 0 0 NA A coding 271 813 14 826 35 PB.5612.4 chr8 - 1312 9 full-splice_match SHARPIN rna30310 1783 9 465 6 multi-exon FALSE canonical 25 57 202 95.5196314901 3 3 0 FALSE 0 0 NA C coding 382 1146 5 1150 25 PB.5612.3 chr8 - 1490 7 novel_not_in_catalog SHARPIN novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 996 94.699524814 2 4 0 TRUE 0 0 NA C coding 177 531 1 531 25 PB.5612.2 chr8 - 1464 7 novel_in_catalog SHARPIN novel NA NA NA NA combination_of_known_junctions FALSE canonical 27 57 207 102.537797909 5 4 0 FALSE 0 0 NA C coding 320 960 10 969 15 PB.5612.1 chr8 - 1334 8 full-splice_match SHARPIN rna30314 1420 8 80 6 multi-exon FALSE canonical 27 57 151 95.6660859448 13 0 0 FALSE 0 0 NA C coding 218 654 446 1099 25 PB.4791.1 chr7 - 1306 11 full-splice_match OSGEP rna25840 1578 11 285 -13 multi-exon FALSE canonical 43 281 360 321.70483366 7 1 0 FALSE 0 0 NA A coding 335 1005 126 1130 10 PB.10509.1 chr18 - 2741 1 intergenic novelGene_1215 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.7712.1 chr12 - 1417 4 full-splice_match TUBA4A rna41725 2152 4 107 628 multi-exon FALSE canonical 36 1187 61 1099.77315843 84 0 0 FALSE 0 0 NA C coding 448 1344 59 1402 20 PB.7712.2 chr12 - 1616 5 novel_not_in_catalog TUBA4A novel NA NA NA NA any annotated donor/acceptor FALSE canonical 3 4 217 1749.23154557 2 1 0 FALSE 0 0 NA C coding 433 1299 260 1558 10 PB.5818.4 chr9 + 5891 1 novel_in_catalog CAMK2G novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA C coding 99 297 1935 2231 70 PB.3403.1 chr5 + 3147 1 intergenic novelGene_815 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 10 14 NA FALSE 0 0 NA A non_coding NA NA NA NA 45 PB.5818.2 chr9 + 1372 1 genic_intron novelGene_1189 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 55 PB.5818.1 chr9 + 1815 20 full-splice_match CAMK2G rna31735 3702 20 80 1807 multi-exon FALSE canonical 34 287 1612 281.760536626 8 0 0 FALSE 0 0 NA C coding 518 1554 44 1597 90 PB.2613.1 chr3 + 1010 8 full-splice_match GSTK1 rna14052 1071 8 28 33 multi-exon FALSE canonical 47 1739 137 686.110049482 3 1 0 FALSE 0 0 NA A coding 226 678 66 743 25 PB.7407.1 chr12 + 3488 1 genic_intron novelGene_222 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 11 NA FALSE 0 0 NA A non_coding NA NA NA NA 35 PB.3479.3 chr5 + 2657 1 genic_intron novelGene_1058 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.7434.1 chr12 - 6075 1 genic_intron novelGene_445 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 5 NA FALSE 0 0 NA A coding 131 393 860 1252 90 PB.8098.1 chr13 + 1915 10 full-splice_match STAMBP rna43852 1955 10 38 2 multi-exon FALSE canonical 28 142 38 162.941707368 6 0 0 FALSE 0 0 NA A coding 424 1272 51 1322 15 PB.9504.1 chr16 - 2875 4 full-splice_match MED31 rna51622 1209 4 47 -1713 multi-exon FALSE canonical 45 812 81 14.8996644258 2 5 0 FALSE 0 0 NA A coding 125 375 72 446 40 PB.10587.6 chr19 - 2694 4 novel_not_in_catalog SLC39A3 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 419 174.419035658 5 10 0 TRUE 0 0 NA C coding 119 357 2011 2367 30 PB.10587.5 chr19 - 2740 3 novel_not_in_catalog SLC39A3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 24 53 409 158.499211355 8 0 0 FALSE 0 0 NA C coding 100 300 200 499 30 PB.10587.4 chr19 - 2690 3 novel_not_in_catalog SLC39A3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 384 184.499322492 4 4 0 FALSE 0 0 NA C coding 119 357 1992 2348 25 PB.10587.3 chr19 - 2751 4 novel_not_in_catalog SLC39A3 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 391 174.419035658 6 10 0 TRUE 0 0 NA C coding 119 357 2029 2385 25 PB.10587.2 chr19 - 2926 2 full-splice_match SLC39A3 rna57264 2935 2 8 1 multi-exon FALSE canonical 38 370 104 NA 16 1 0 FALSE 0 0 NA C coding 105 315 204 518 30 PB.10587.1 chr19 - 1364 3 full-splice_match SLC39A3 rna57263 1128 3 -25 -211 multi-exon FALSE canonical 38 370 109 144.499134946 6 0 0 FALSE 0 0 NA C coding 314 942 209 1150 25 PB.2572.2 chr3 - 1437 4 full-splice_match C3H7orf49 rna13844 1524 4 33 54 multi-exon FALSE canonical 39 287 329 50.3090449124 12 0 0 FALSE 0 0 NA A coding 158 474 193 666 25 PB.2420.3 chr3 - 2726 15 full-splice_match TAF6 rna13094 2750 15 13 11 multi-exon FALSE canonical 9 9 1995 83.2225930863 87 0 0 FALSE 0 0 NA C coding 678 2034 538 2571 25 PB.7900.2 chr13 - 2697 10 novel_not_in_catalog PPM1G novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 2 1363 1044.63151398 2 2 0 FALSE 0 0 NA C coding 407 1221 160 1380 15 PB.7900.1 chr13 - 2238 10 full-splice_match PPM1G rna42888 2205 10 -33 0 multi-exon FALSE canonical 41 516 318 796.619733625 13 1 0 FALSE 0 0 NA C coding 547 1641 199 1839 35 PB.5172.47 chr7 + 1521 8 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 296 2724.88531869 2 13 0 TRUE 0 0 NA B coding 485 1455 17 1471 15 PB.5172.46 chr7 + 1541 9 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 237 3392.99705275 2 8 0 TRUE 0 0 NA B coding 196 588 819 1406 15 PB.7169.2 chr11 - 3099 3 novel_not_in_catalog USP44 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 106 183 4 13 0 FALSE 0 0 NA C coding 541 1623 186 1808 90 PB.5172.44 chr7 + 1570 10 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 269 3385.38638858 2 21 0 TRUE 0 0 NA B coding 196 588 855 1442 15 PB.5172.42 chr7 + 1547 8 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 321 3335.83752602 2 4 0 TRUE 0 0 NA B coding 196 588 826 1413 15 PB.5974.2 chr9 - 2764 20 full-splice_match HPS1 rna32562 3630 20 34 832 multi-exon FALSE canonical 22 31 38 127.98046726 57 1 0 FALSE 0 0 NA C coding 700 2100 154 2253 30 PB.5081.3 chr7 - 2015 12 novel_not_in_catalog TC2N novel NA NA NA NA any annotated donor/acceptor FALSE canonical 26 61 203 195.872407449 2 5 0 FALSE 0 0 NA B coding 219 657 259 915 25 PB.7312.4 chr11 - 2934 1 novel_in_catalog LOC696336 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 13 2 NA FALSE 0 0 NA B non_coding NA NA NA NA 15 PB.7312.5 chr11 - 3616 11 novel_in_catalog LOC696336 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 12 19 921 76.6355009118 5 1 0 FALSE 0 0 NA B coding 424 1272 490 1761 15 PB.3158.2 chr4 + 1676 1 intergenic novelGene_2116 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.7914.1 chr13 + 1534 1 genic_intron novelGene_657 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.5172.49 chr7 + 1945 9 fusion LOC711872_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 350 3186.10718589 3 3 0 TRUE 0 0 NA B coding 375 1125 698 1822 35 PB.11772.1 chrX + 3702 4 genic LOC106995146 novel NA NA NA NA no_subcategory FALSE canonical 8 8 434 17.2626765016 2 13 0 TRUE 0 0 NA A coding 99 297 296 592 40 PB.5234.3 chr8 + 1434 1 incomplete-splice_match SLC39A14 rna28498 4608 9 3165 10 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.5234.2 chr8 + 4570 9 full-splice_match SLC39A14 rna28499 4608 9 28 10 multi-exon FALSE canonical 25 119 129 436.324420586 7 2 0 FALSE 0 0 NA C coding 490 1470 145 1614 30 PB.5234.1 chr8 + 4574 9 full-splice_match SLC39A14 rna28498 4608 9 25 9 multi-exon FALSE canonical 14 119 132 453.646338021 2 3 0 FALSE 0 0 NA C coding 490 1470 148 1617 30 PB.11567.1 chr20 - 1804 20 full-splice_match NAE1 rna62460 1741 20 -30 -33 multi-exon FALSE canonical 41 391 130 426.319129292 19 0 0 FALSE 0 0 NA A coding 534 1602 78 1679 25 PB.3378.1 chr5 + 1551 1 intergenic novelGene_529 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.11623.6 chr20 + 1772 1 incomplete-splice_match WWP2 rna62675 4487 24 2712 4 mono-exon FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 40 PB.6347.1 chr10 + 3726 9 full-splice_match SIRPA rna34583 4110 9 373 11 multi-exon FALSE canonical 0 0 20 265.744237943 39 1 0 FALSE 0 0 NA C coding 503 1509 30 1538 25 PB.5369.1 chr8 - 2911 4 antisense novelGene_RAB2A_AS novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 423 0 2 5 0 FALSE 0 0 NA A coding 49 147 164 310 15 PB.6347.3 chr10 + 3711 8 full-splice_match SIRPA rna34584 3995 8 273 11 multi-exon FALSE canonical 24 84 93 215.893492259 11 0 0 FALSE 0 0 NA C coding 503 1509 15 1523 25 PB.6347.2 chr10 + 3108 6 novel_in_catalog SIRPA novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 19 31 492 239.418044433 2 1 0 FALSE 0 0 NA C coding 286 858 60 917 15 PB.6347.4 chr10 + 3750 8 novel_in_catalog SIRPA novel NA NA NA NA combination_of_known_junctions FALSE canonical 24 84 120 246.904839969 2 5 0 FALSE 0 0 NA C coding 507 1521 42 1562 25 PB.5810.1 chr9 - 2971 2 full-splice_match KCNMA1 rna31682 6081 2 3107 3 multi-exon FALSE canonical 12 39 530 NA 5 8 0 FALSE 0 0 NA A coding 183 549 162 710 35 PB.11941.2 chrX + 5830 1 genic_intron novelGene_1330 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A coding 113 339 3949 4287 80 PB.11941.3 chrX + 3526 4 novel_not_in_catalog NHSL2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 9 13 54 65.7419196556 4 0 0 FALSE 0 0 NA B coding 937 2811 27 2837 20 PB.11941.1 chrX + 5881 8 novel_not_in_catalog NHSL2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 2 515 50.8133840637 2 5 0 FALSE 0 0 NA B coding 1146 3438 473 3910 20 PB.11024.1 chr19 + 1616 10 full-splice_match TOMM40 rna59565 1682 10 29 37 multi-exon FALSE canonical 0 0 51 201.876199687 2 3 0 FALSE 0 0 NA A coding 361 1083 58 1140 75 PB.11941.4 chrX + 1266 1 genic_intron novelGene_1331 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A coding 103 309 693 1001 95 PB.11941.5 chrX + 5705 1 genic_intron novelGene_1332 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 15 NA FALSE 0 0 NA A coding 113 339 1786 2124 75 PB.1824.2 chr2 + 3151 9 novel_not_in_catalog PLSCR4 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 104 214.294190309 10 1 0 FALSE 0 0 NA C coding 329 987 126 1112 25 PB.1824.3 chr2 + 3245 8 novel_in_catalog PLSCR4 novel NA NA NA NA combination_of_known_junctions FALSE canonical 29 401 232 122.331516789 5 1 0 FALSE 0 0 NA C coding 329 987 226 1212 30 PB.1824.1 chr2 + 3132 9 full-splice_match PLSCR4 rna9740 2936 9 24 -220 multi-exon FALSE canonical 29 198 85 162.729837461 16 1 0 FALSE 0 0 NA C coding 329 987 107 1093 25 PB.9995.1 chr16 + 3009 14 incomplete-splice_match COG1 rna54132 4514 16 2 1503 3prime_fragment TRUE canonical 15 22 329 114.293481879 41 2 0 FALSE 0 0 NA A coding 980 2940 15 2954 25 PB.4223.1 chr6 + 3068 9 full-splice_match RNF14 rna22838 3008 9 -14 -46 multi-exon FALSE canonical 41 391 57 446.063896768 33 0 0 FALSE 0 0 NA C coding 474 1422 248 1669 35 PB.9732.1 chr16 - 473 1 full-splice_match RPS17L rna52775 478 1 1 4 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A coding 135 405 24 428 70 PB.7364.1 chr11 + 3003 20 full-splice_match ATP6V0A2 rna39725 4600 20 52 1545 multi-exon FALSE canonical 36 150 2488 159.715371834 2 2 0 FALSE 0 0 NA A coding 856 2568 196 2763 45 PB.11840.1 chrX + 2567 1 incomplete-splice_match USP9X rna63669 12410 45 9840 4 mono-exon FALSE canonical NA NA NA NA 6 0 NA FALSE 0 0 NA B non_coding NA NA NA NA 15 PB.3208.2 chr4 + 1603 10 novel_in_catalog MED23 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 22 33 676 408.015931062 2 1 0 FALSE 0 0 NA C coding 338 1014 182 1195 85 PB.3816.1 chr6 + 1878 5 full-splice_match SRD5A1 rna20832 2298 5 76 344 multi-exon FALSE canonical 23 69 447 23.3452350599 3 0 0 FALSE 0 0 NA A coding 263 789 143 931 10 PB.9143.1 chr15 - 1086 3 full-splice_match ATP6V1G1 rna49644 650 3 -30 -406 multi-exon FALSE canonical 48 6316 173 1081 17 1 0 FALSE 0 0 NA A coding 118 354 92 445 10 PB.9417.17 chr15 + 1843 1 novel_in_catalog SYK novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 95 PB.6034.1 chr9 + 1432 4 full-splice_match SFR1 rna32844 1512 4 76 4 multi-exon FALSE canonical 29 171 25 112.227447623 2 3 0 FALSE 0 0 NA A coding 245 735 13 747 10 PB.4315.3 chr6 - 5971 20 novel_in_catalog LCP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 26 157 824 234.079046478 2 9 0 FALSE 0 0 NA C coding 390 1170 204 1373 40 PB.1068.2 chr1 - 3839 1 genic_intron novelGene_2597 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A coding 7 21 287 307 90 PB.7486.1 chr12 - 1506 14 full-splice_match ORC4 rna40334 5031 14 203 3322 multi-exon FALSE canonical 45 894 64 289.899982753 5 0 0 FALSE 0 0 NA C coding 436 1308 82 1389 20 PB.2474.2 chr3 - 3719 24 novel_not_in_catalog COG5 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1739 627.355561066 2 0 0 FALSE 0 0 NA C coding 480 1440 31 1470 45 PB.1068.1 chr1 - 6382 19 full-splice_match RALGPS2 rna5853 7507 19 111 1014 multi-exon FALSE canonical 42 372 156 325.673149031 2 14 0 FALSE 0 0 NA C coding 557 1671 240 1910 35 PB.10075.1 chr16 + 2543 14 full-splice_match ENGASE rna54463 4510 14 117 1850 multi-exon FALSE canonical 12 22 1688 56.665686266 2 2 0 FALSE 0 0 NA A coding 734 2202 16 2217 30 PB.2474.5 chr3 - 3132 1 genic_intron novelGene_2215 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 9 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.252.1 chr1 + 1751 9 full-splice_match TMEM39B rna1279 1938 9 180 7 multi-exon FALSE canonical 18 31 436 51.205468458 3 0 0 FALSE 0 0 NA C coding 492 1476 86 1561 20 PB.3370.1 chr5 + 6195 4 full-splice_match MED28 rna18385 1075 4 12 -5132 multi-exon FALSE canonical 48 2351 168 603.819509456 11 8 0 FALSE 0 0 NA A coding 178 534 10 543 25 PB.252.2 chr1 + 1451 7 novel_in_catalog TMEM39B novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 0 0 375 66.0832807902 5 2 0 FALSE 0 0 NA C coding 293 879 383 1261 20 PB.9417.23 chr15 + 2777 1 novel_in_catalog SYK novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 8 7 NA FALSE 0 0 NA C coding 101 303 1414 1716 70 PB.9417.22 chr15 + 979 1 genic_intron novelGene_1893 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 60 PB.3484.12 chr5 + 5597 1 genic_intron novelGene_1120 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 13 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.9417.20 chr15 + 2561 1 genic_intron novelGene_1892 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 13 4 NA FALSE 0 0 NA A coding 131 393 930 1322 70 PB.12083.1 chrX - 1268 1 full-splice_match FAM127C rna65188 1247 1 -35 14 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A coding 113 339 67 405 45 PB.1542.2 chr2 - 3444 7 novel_in_catalog GNAI2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1126 1463 865.050287556 2 1 0 FALSE 0 0 NA C coding 303 909 1317 2225 40 PB.5727.13 chr9 + 3553 1 novel_in_catalog WAC novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.5727.14 chr9 + 3044 11 novel_in_catalog WAC novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 2024 892 754.732402908 2 2 0 FALSE 0 0 NA C coding 472 1416 253 1668 35 PB.5265.10 chr8 + 3981 30 novel_not_in_catalog PTK2B novel NA NA NA NA any annotated donor/acceptor FALSE canonical 14 19 164 283.504850047 4 4 0 FALSE 0 0 NA B coding 967 2901 202 3102 0 PB.8343.1 chr14 + 1164 3 full-splice_match ZDHHC24 rna45115 1939 3 204 571 multi-exon FALSE canonical 17 28 311 30.495901364 2 2 0 FALSE 0 0 NA A coding 284 852 31 882 15 PB.5265.12 chr8 + 3048 1 novel_in_catalog PTK2B novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 5 21 NA FALSE 0 0 NA B non_coding NA NA NA NA 85 PB.3183.4 chr4 + 5544 1 novel_in_catalog MAP3K5 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 28 NA FALSE 0 0 NA B non_coding NA NA NA NA 80 PB.860.1 chr1 - 2797 3 novel_not_in_catalog JMJD4 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 6 7 1349 192.499350648 2 0 0 FALSE 0 0 NA C coding 185 555 1077 1631 10 PB.860.2 chr1 - 2504 6 full-splice_match JMJD4 rna4692 2607 6 52 51 multi-exon FALSE canonical 42 289 917 116.133543819 3 1 0 FALSE 0 0 NA C coding 417 1251 96 1346 20 PB.11708.1 chr20 + 6741 2 genic_intron novelGene_1411 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 2648 NA 3 28 0 FALSE 0 0 NA A coding 108 324 5316 5639 90 PB.3183.1 chr4 + 5742 25 novel_in_catalog MAP3K5 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 632 2349 280.17672994 2 10 0 FALSE 0 0 NA B coding 1033 3099 400 3498 95 PB.10069.8 chr16 - 3331 13 full-splice_match CYTH1 rna54443 4342 13 1004 7 multi-exon FALSE canonical 41 193 911 231.112526705 2 2 0 FALSE 0 0 NA C coding 399 1197 95 1291 15 PB.10069.9 chr16 - 2719 13 novel_not_in_catalog CYTH1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 5 6 887 323.70665733 6 3 0 FALSE 0 0 NA C coding 373 1119 74 1192 80 PB.10069.6 chr16 - 3304 14 novel_not_in_catalog CYTH1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 5 6 888 312.541197284 93 0 0 FALSE 0 0 NA C coding 398 1194 75 1268 15 PB.11478.1 chr20 - 1470 11 full-splice_match KAT8 rna61998 1504 11 0 34 multi-exon FALSE canonical 44 312 1024 213.562637182 2 0 0 FALSE 0 0 NA A coding 458 1374 19 1392 15 PB.3011.4 chr4 - 5596 1 novel_in_catalog MB21D1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA B coding 255 765 114 878 95 PB.11937.5 chrX + 2604 12 novel_not_in_catalog NONO novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 66 1085.37458972 3 4 0 FALSE 0 0 NA C coding 471 1413 107 1519 10 PB.5242.1 chr8 - 1582 10 fusion TNFRSF10A_LOC106999709 novel NA NA NA NA no_subcategory FALSE canonical 0 0 360 146.441114445 10 0 0 FALSE 0 0 NA A coding 471 1413 55 1467 10 PB.10682.7 chr19 - 3847 28 novel_not_in_catalog MYO1F novel NA NA NA NA any annotated donor/acceptor FALSE canonical 22 135 2892 169.434353069 196 3 0 TRUE 0 0 NA B coding 1103 3309 123 3431 35 PB.224.3 chr1 + 2978 6 full-splice_match THEMIS2 rna1104 2745 6 0 -233 multi-exon FALSE canonical 27 126 116 112.880467752 21 0 0 FALSE 0 0 NA C coding 644 1932 23 1954 80 PB.11768.1 chrX - 3668 11 novel_not_in_catalog ARSD novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2198 185.415749061 3 2 0 TRUE 0 0 NA C coding 598 1794 32 1825 80 PB.224.1 chr1 + 3124 6 novel_not_in_catalog THEMIS2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 9 14 208 141.389532852 4 1 0 FALSE 0 0 NA C coding 574 1722 325 2046 45 PB.2442.3 chr3 - 3690 10 fusion FIS1_CLDN15 novel NA NA NA NA no_subcategory FALSE canonical 18 37 3265 2240.48811646 3 1 0 FALSE 0 0 NA A coding 228 684 2685 3368 25 PB.7962.2 chr13 - 2645 1 antisense novelGene_EML4_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.2190.1 chr3 + 1563 5 full-splice_match SBDS rna11681 1672 5 97 12 multi-exon FALSE canonical 47 1763 285 944.995238083 57 0 0 FALSE 0 0 NA A coding 250 750 158 907 25 PB.224.5 chr1 + 1316 2 novel_in_catalog THEMIS2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 417 186 NA 2 2 0 FALSE 0 0 NA C non_coding NA NA NA NA 45 PB.11955.1 chrX + 2610 1 intergenic novelGene_1374 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.6632.1 chr10 - 1592 2 full-splice_match TOB2 rna36123 2386 2 24 770 multi-exon FALSE canonical 27 55 475 NA 76 0 0 FALSE 0 0 NA A coding 335 1005 538 1542 70 PB.119.3 chr1 - 4245 24 novel_not_in_catalog EMC1 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 3147 211.215529732 2 5 0 TRUE 0 0 NA C coding 993 2979 34 3012 20 PB.119.2 chr1 - 4281 23 full-splice_match EMC1 rna666 3023 23 -12 -1246 multi-exon FALSE canonical 31 334 818 174.771279105 13 6 0 FALSE 0 0 NA C coding 993 2979 33 3011 30 PB.119.5 chr1 - 4261 24 novel_not_in_catalog EMC1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 3145 211.215529732 11 5 0 TRUE 0 0 NA C coding 993 2979 26 3004 30 PB.10092.1 chr16 - 3789 9 novel_not_in_catalog FAAP100 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 223 20.4694894905 7 8 0 FALSE 0 0 NA C coding 730 2190 680 2869 15 PB.4149.3 chr6 + 1528 1 genic_intron novelGene_2209 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.3923.1 chr6 - 4354 1 incomplete-splice_match IL6ST rna21397 7268 16 2906 9 mono-exon FALSE canonical NA NA NA NA 13 5 NA FALSE 0 0 NA C non_coding NA NA NA NA 20 PB.3923.6 chr6 - 3291 17 full-splice_match IL6ST rna21399 7400 17 24 4085 multi-exon FALSE canonical 41 1414 176 1274.42849937 46 2 0 FALSE 0 0 NA C coding 918 2754 280 3033 55 PB.3923.7 chr6 - 6881 14 incomplete-splice_match IL6ST rna21398 7471 18 587 3 5prime_fragment FALSE canonical 48 3097 1442 1116.24728443 2 5 0 FALSE 0 0 NA C coding 777 2331 167 2497 10 PB.6880.1 chr11 + 2832 18 full-splice_match DNM1L rna37452 4379 18 93 1454 multi-exon FALSE canonical 37 314 1662 305.134396619 5 0 0 FALSE 0 0 NA C coding 699 2097 67 2163 40 PB.6880.3 chr11 + 2919 20 full-splice_match DNM1L rna37450 4490 20 115 1456 multi-exon FALSE canonical 38 509 1718 311.080375466 2 0 0 FALSE 0 0 NA C coding 736 2208 45 2252 40 PB.6880.2 chr11 + 2839 19 full-splice_match DNM1L rna37447 4417 19 120 1458 multi-exon FALSE canonical 46 360 1640 306.696918798 4 1 0 FALSE 0 0 NA C coding 710 2130 45 2174 40 PB.6880.4 chr11 + 3112 18 novel_not_in_catalog DNM1L novel NA NA NA NA any annotated donor/acceptor FALSE canonical 2 2 1855 419.398378633 2 3 0 FALSE 0 0 NA C coding 272 816 2091 2906 35 PB.10432.1 chr18 + 2877 2 incomplete-splice_match LOC106994480 rna56397 1776 5 1117 -2218 internal_fragment FALSE canonical 25 34 431 NA 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.8399.11 chr14 + 6288 10 novel_in_catalog SF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 22 44 5916 529.552641387 3 1 0 FALSE 0 0 NA C coding 524 1572 4680 6251 30 PB.10563.3 chr19 + 2869 1 novel_in_catalog DAZAP1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 6 6 NA FALSE 0 0 NA C non_coding NA NA NA NA 65 PB.10563.2 chr19 + 2020 12 full-splice_match DAZAP1 rna57153 1974 12 -52 6 multi-exon FALSE canonical 35 90 736 387.845329996 6 6 0 FALSE 0 0 NA C coding 366 1098 160 1257 25 PB.5872.3 chr9 - 3525 1 genic_intron novelGene_1387 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.10563.4 chr19 + 7413 5 novel_in_catalog DAZAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 35 90 6129 87.3384222436 3 3 0 FALSE 0 0 NA C coding 173 519 6132 6650 25 PB.5872.1 chr9 - 4560 8 full-splice_match REEP3 rna32067 2338 8 -29 -2193 multi-exon FALSE canonical 44 914 166 636.888530278 7 6 0 FALSE 0 0 NA A coding 255 765 135 899 15 PB.3726.1 chr5 - 1558 1 incomplete-splice_match SH3D19 rna20231 4972 22 3408 7 mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.4149.2 chr6 + 2736 1 novel_in_catalog UBE2B novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 19 0 NA FALSE 0 0 NA C coding 99 297 300 596 85 PB.3740.1 chr5 - 1823 15 full-splice_match PLRG1 rna20291 3348 15 14 1511 multi-exon FALSE canonical 45 1186 950 238.738350501 35 3 0 FALSE 0 0 NA A coding 514 1542 114 1655 10 PB.11140.2 chr19 - 3891 6 novel_not_in_catalog ZNF841 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 19 28 200 147.020406747 3 0 0 FALSE 0 0 NA C coding 932 2796 401 3196 20 PB.11019.1 chr19 - 3044 5 full-splice_match ZNF180 rna59547 3051 5 -10 17 multi-exon FALSE canonical 10 10 265 74.8398289683 3 3 0 FALSE 0 0 NA A coding 665 1995 309 2303 65 PB.10005.3 chr16 - 1417 4 full-splice_match CD300C rna54183 1523 4 2 104 multi-exon FALSE canonical 12 20 849 16.3707055437 3 3 0 FALSE 0 0 NA C coding 224 672 323 994 20 PB.2198.1 chr3 - 2709 2 novel_in_catalog LOC706126 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 522 1754 NA 2 2 0 FALSE 0 0 NA A non_coding NA NA NA NA 10 PB.3640.1 chr5 - 3195 4 full-splice_match PLA2G12A rna19692 1561 4 7 -1641 multi-exon FALSE canonical 36 818 458 238.713217062 6 2 0 FALSE 0 0 NA A coding 189 567 251 817 20 PB.2354.2 chr3 + 1576 7 novel_in_catalog SRI novel NA NA NA NA combination_of_known_junctions FALSE canonical 17 32 68 1241.68876938 3 0 0 FALSE 0 0 NA C coding 109 327 1068 1394 40 PB.736.1 chr1 + 4509 30 full-splice_match INTS3 rna4019 4510 30 0 1 multi-exon FALSE canonical 31 353 1982 205.034143498 6 1 0 FALSE 0 0 NA C coding 1043 3129 571 3699 5 PB.507.1 chr1 + 2959 1 genic_intron novelGene_1655 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.11937.3 chrX + 2934 1 novel_in_catalog NONO novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 14 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.7849.2 chr13 + 3037 3 full-splice_match TRIB2 rna42575 4411 3 1365 9 multi-exon FALSE canonical 45 321 632 12.4899959968 25 1 0 FALSE 0 0 NA C coding 343 1029 70 1098 40 PB.7849.1 chr13 + 4114 4 full-splice_match TRIB2 rna42576 4186 4 67 5 multi-exon FALSE canonical 35 94 1156 113.362251213 10 5 0 FALSE 0 0 NA C coding 207 621 1551 2171 40 PB.762.2 chr1 - 1560 10 full-splice_match GBA rna4181 2068 10 31 477 multi-exon FALSE canonical 13 19 1123 119.49476976 2 1 0 FALSE 0 0 NA C coding 441 1323 185 1507 20 PB.3975.1 chr6 + 858 6 full-splice_match BTF3 rna21624 907 6 30 19 multi-exon FALSE canonical 48 6861 116 947.214864748 7 0 0 FALSE 0 0 NA A coding 162 486 117 602 20 PB.8658.2 chr14 + 2901 8 full-splice_match TRIM5 rna47027 2989 8 89 -1 multi-exon FALSE canonical 39 528 1059 245.008163129 47 1 0 FALSE 0 0 NA C coding 497 1491 159 1649 25 PB.4858.1 chr7 - 2771 4 full-splice_match CFL2 rna26324 3180 4 172 237 multi-exon FALSE canonical 31 742 100 684.748128877 52 2 0 FALSE 0 0 NA C coding 166 498 98 595 70 PB.10965.3 chr19 + 1743 1 novel_in_catalog PLD3 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 9 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.10965.2 chr19 + 1947 13 full-splice_match PLD3 rna59235 1985 13 33 5 multi-exon FALSE canonical 34 285 72 903.7283884 7 2 0 FALSE 0 0 NA C coding 490 1470 171 1640 15 PB.10965.1 chr19 + 1913 12 full-splice_match PLD3 rna59231 1953 12 34 6 multi-exon TRUE canonical 36 602 566 822.48586614 15 0 0 FALSE 0 0 NA C coding 490 1470 138 1607 15 PB.7660.1 chr12 + 731 6 full-splice_match EEF1B2 rna41324 1036 6 306 -1 multi-exon FALSE canonical 48 10616 99 2938.19264174 13 0 0 FALSE 0 0 NA A coding 225 675 20 694 25 PB.270.1 chr1 + 1395 1 genic ZNF362 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A coding 281 843 169 1011 5 PB.6719.1 chr11 + 1870 3 full-splice_match RHNO1 rna36588 2015 3 27 118 multi-exon FALSE canonical 30 151 61 66 12 0 0 FALSE 0 0 NA A coding 240 720 146 865 35 PB.7205.7 chr11 + 3623 1 genic_intron novelGene_1856 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 12 0 NA FALSE 0 0 NA A coding 103 309 104 412 75 PB.10965.4 chr19 + 1948 12 full-splice_match PLD3 rna59236 1992 12 39 5 multi-exon FALSE canonical 22 70 66 919.498232733 3 1 0 FALSE 0 0 NA C coding 490 1470 172 1641 15 PB.7205.9 chr11 + 2759 1 genic_intron novelGene_1859 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.7205.8 chr11 + 2923 1 genic_intron novelGene_1858 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A coding 99 297 752 1048 70 PB.10965.9 chr19 + 1951 12 incomplete-splice_match PLD3 rna59233 2368 13 413 4 internal_fragment FALSE canonical 23 68 73 919.801065448 2 1 0 FALSE 0 0 NA C coding 490 1470 174 1643 20 PB.11257.1 chr20 - 992 3 full-splice_match MRPS34 rna61023 1003 3 6 5 multi-exon FALSE canonical 43 339 336 194 4 1 0 FALSE 0 0 NA A coding 218 654 16 669 15 PB.8624.1 chr14 - 1498 4 full-splice_match ADM rna46807 1598 4 96 4 multi-exon FALSE canonical 23 157 422 58.2065288434 24 0 0 FALSE 0 0 NA A coding 185 555 175 729 10 PB.5172.426 chr7 + 1563 8 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 374 3521.32418275 2 29 0 TRUE 0 0 NA B coding 196 588 843 1430 15 PB.3168.1 chr4 - 1366 8 full-splice_match VTA1 rna17210 2131 8 6 759 multi-exon FALSE canonical 48 791 796 154.136303316 18 1 0 FALSE 0 0 NA C coding 307 921 19 939 40 PB.5172.424 chr7 + 1484 8 novel_not_in_catalog LOC720839 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 270 2879.79218 2 14 0 TRUE 0 0 NA B coding 91 273 36 308 25 PB.5172.425 chr7 + 2141 10 novel_not_in_catalog LOC711872 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 387 3264.33852411 2 25 2 TRUE 0 0 NA B coding 442 1326 695 2020 20 PB.5172.422 chr7 + 1505 7 novel_not_in_catalog LOC720839 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 391 2919.63302489 2 15 0 TRUE 0 0 NA B coding 145 435 36 470 25 PB.7579.1 chr12 + 1505 6 full-splice_match UBE2E3 rna40924 1182 6 -268 -55 multi-exon FALSE canonical 33 148 329 516.129828628 10 6 0 FALSE 0 0 NA A coding 207 621 355 975 20 PB.5172.420 chr7 + 1492 7 novel_not_in_catalog LOC720839 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 375 2352.13605049 3 14 0 TRUE 0 0 NA B coding 245 735 713 1447 20 PB.3808.1 chr6 + 4264 12 full-splice_match SLC6A19 rna20784 2178 12 -56 -2030 multi-exon FALSE canonical 2 90 258 222.948424529 3 0 0 FALSE 0 0 NA A coding 634 1902 57 1958 40 PB.7678.1 chr12 + 1353 1 intergenic novelGene_1760 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.9605.2 chr16 - 1636 11 full-splice_match ALDH3A1 rna52192 1831 11 187 8 multi-exon FALSE canonical 1 1 40 9.48683298051 3 0 0 FALSE 0 0 NA A coding 453 1359 46 1404 35 PB.9973.1 chr16 + 4200 10 full-splice_match PITPNC1 rna54055 3711 10 1093 -1582 multi-exon FALSE canonical 46 364 1408 237.134982658 7 2 0 FALSE 0 0 NA C coding 268 804 608 1411 85 PB.2973.1 chr4 - 3034 4 novel_in_catalog CLIC5 novel NA NA NA NA combination_of_known_junctions FALSE canonical 21 1046 382 781.456332753 7 2 0 FALSE 0 0 NA A coding 137 411 320 730 80 PB.2246.1 chr3 + 1674 2 full-splice_match C3H7orf25 rna12074 1904 2 226 4 multi-exon FALSE canonical 32 87 24 NA 5 0 0 FALSE 0 0 NA A coding 421 1263 46 1308 15 PB.3168.3 chr4 - 2969 4 novel_in_catalog VTA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1110 355 80.1560977094 7 6 0 FALSE 0 0 NA C coding 145 435 21 455 85 PB.5172.428 chr7 + 1535 7 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 374 3596.74644644 3 11 0 TRUE 0 0 NA B coding 196 588 820 1407 15 PB.2468.1 chr3 - 2641 4 full-splice_match ATXN7L1 rna13336 2700 4 112 -53 multi-exon FALSE canonical 35 174 284 82.2678552048 2 6 0 FALSE 0 0 NA A coding 118 354 14 367 45 PB.7219.2 chr11 - 1614 2 full-splice_match MTERF2 rna39173 1569 2 -55 10 multi-exon FALSE canonical 41 106 185 NA 2 0 0 FALSE 0 0 NA C coding 385 1155 243 1397 50 PB.5844.1 chr9 + 2908 3 full-splice_match PRF1 rna31902 2645 3 197 -460 multi-exon FALSE canonical 16 51 69 47.4973683482 51 0 0 FALSE 0 0 NA C coding 555 1665 74 1738 40 PB.1049.1 chr1 + 4202 7 full-splice_match RNASEL rna5764 4272 7 66 4 multi-exon FALSE canonical 40 228 2114 30.6594194335 13 1 0 FALSE 0 0 NA A coding 741 2223 210 2432 15 PB.7219.1 chr11 - 3239 2 novel_in_catalog MTERF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 534 2033 NA 22 3 0 FALSE 0 0 NA C coding 383 1149 2091 3239 40 PB.10448.1 chr18 + 2993 25 novel_not_in_catalog PIK3C3 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 1566 424.66928309 15 18 0 TRUE 0 0 NA C coding 517 1551 74 1624 40 PB.5260.1 chr8 - 3171 12 full-splice_match KCTD9 rna28575 2446 12 -109 -616 multi-exon FALSE canonical 40 259 232 215.480857618 11 4 0 FALSE 0 0 NA A coding 389 1167 185 1351 30 PB.5844.6 chr9 + 1483 1 incomplete-splice_match PRF1 rna31902 2645 3 1158 5 mono-exon FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA C coding 93 279 499 777 20 PB.10448.2 chr18 + 2936 25 full-splice_match PIK3C3 rna56486 6198 25 66 3196 multi-exon FALSE canonical 47 618 2452 347.52553863 25 0 0 FALSE 0 0 NA C coding 887 2661 21 2681 50 PB.5702.1 chr9 - 1936 1 genic_intron novelGene_432 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA A coding 105 315 1001 1315 90 PB.2897.7 chr4 - 6091 9 novel_in_catalog STK38 novel NA NA NA NA combination_of_known_junctions FALSE canonical 33 126 259 292.576485726 2 9 1 FALSE 0 0 NA C coding 285 855 265 1119 75 PB.2897.6 chr4 - 2002 1 novel_in_catalog STK38 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.2897.1 chr4 - 3505 14 full-splice_match STK38 rna15830 3548 14 49 -6 multi-exon FALSE canonical 33 126 214 319.831205482 129 2 1 FALSE 0 0 NA C coding 465 1395 220 1614 50 PB.5402.1 chr8 - 2924 6 full-splice_match JPH1 rna29340 3013 6 79 10 multi-exon FALSE canonical 8 61 2145 82.2982381342 4 2 0 FALSE 0 0 NA A coding 661 1983 145 2127 35 PB.6297.1 chr10 + 2639 15 full-splice_match GGT7 rna34320 2622 15 -6 -11 multi-exon FALSE canonical 16 36 209 112.298708808 11 0 0 FALSE 0 0 NA A coding 662 1986 41 2026 15 PB.11686.1 chr20 - 2636 2 novel_not_in_catalog LOC106995099 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 8 15 301 NA 3 4 0 FALSE 0 0 NA A non_coding NA NA NA NA 35 PB.1204.1 chr1 - 1761 8 full-splice_match TFB2M rna6491 1838 8 67 10 multi-exon FALSE canonical 42 609 515 147.908755657 9 0 0 FALSE 0 0 NA A coding 396 1188 114 1301 30 PB.10428.1 chr18 + 3480 3 novel_in_catalog DTNA novel NA NA NA NA combination_of_known_junctions FALSE canonical 21 245 200 238 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.10971.1 chr19 + 1126 8 full-splice_match RAB4B rna59275 1588 8 458 4 multi-exon FALSE canonical 25 39 740 169.336942219 4 1 0 FALSE 0 0 NA C coding 213 639 84 722 10 PB.10971.2 chr19 + 1442 7 novel_in_catalog RAB4B novel NA NA NA NA combination_of_known_junctions FALSE canonical 25 39 1061 182.830522616 2 0 0 FALSE 0 0 NA C non_coding NA NA NA NA 10 PB.6901.1 chr11 - 2746 1 genic SLC38A2 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 219 1 NA FALSE 0 0 NA A coding 122 366 1559 1924 20 PB.8781.9 chr14 - 7415 8 novel_not_in_catalog CCDC82 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 93 492.013211205 2 14 0 TRUE 0 0 NA C coding 524 1572 4984 6555 35 PB.8057.1 chr13 - 4441 6 full-splice_match SPRED2 rna43651 4131 6 -159 -151 multi-exon FALSE canonical 28 114 561 41.2067955561 2 3 0 FALSE 0 0 NA A coding 418 1254 536 1789 15 PB.3084.1 chr4 - 3402 1 genic_intron novelGene_1873 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 13 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.8781.8 chr14 - 2990 8 novel_in_catalog CCDC82 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 9 9 544 489.386350443 2 6 1 FALSE 0 0 NA C coding 524 1572 559 2130 35 PB.9972.3 chr16 - 1491 11 full-splice_match PSMD12 rna54054 1800 11 18 291 multi-exon FALSE canonical 43 333 170 391.290173656 31 1 0 FALSE 0 0 NA C coding 456 1368 63 1430 25 PB.9538.1 chr16 - 2748 4 novel_in_catalog VAMP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 21 30 106 344.969563875 2 0 0 FALSE 0 0 NA C coding 113 339 105 443 20 PB.9538.2 chr16 - 3189 3 novel_in_catalog VAMP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 21 30 67 422.499704142 13 4 0 FALSE 0 0 NA C coding 100 300 66 365 25 PB.9538.3 chr16 - 2098 5 full-splice_match VAMP2 rna51821 2144 5 32 14 multi-exon FALSE canonical 21 30 71 318.957677443 11 2 0 FALSE 0 0 NA C coding 116 348 70 417 35 PB.8853.3 chr14 - 3701 5 novel_in_catalog MPZL3 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 33 64 254 75.2196782764 6 3 0 FALSE 0 0 NA C coding 108 324 15 338 5 PB.6981.3 chr11 + 1763 3 novel_in_catalog PRR13 novel NA NA NA NA combination_of_known_junctions FALSE canonical 37 442 40 353 2 0 0 FALSE 0 0 NA C non_coding NA NA NA NA 5 PB.8853.2 chr14 - 3951 6 full-splice_match MPZL3 rna48113 4453 6 493 9 multi-exon FALSE canonical 36 95 126 60.3738353925 9 7 0 FALSE 0 0 NA C coding 235 705 54 758 5 PB.8490.1 chr14 - 2952 1 genic PTPRJ novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 19 14 NA FALSE 0 0 NA B coding 106 318 1898 2215 75 PB.8490.2 chr14 - 6037 18 novel_in_catalog PTPRJ novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 15 20 166 305.270371966 3 1 1 FALSE 0 0 NA B coding 782 2346 217 2562 10 PB.8490.3 chr14 - 6264 19 incomplete-splice_match PTPRJ rna45928 5685 24 1417 -1996 5prime_fragment FALSE canonical 43 454 1697 232.52311713 3 0 0 FALSE 0 0 NA B coding 782 2346 452 2797 25 PB.8490.4 chr14 - 3087 2 novel_not_in_catalog PTPRJ novel NA NA NA NA not any annotated donor/acceptor FALSE canonical 0 0 24 NA 2 8 0 TRUE 0 0 NA B non_coding NA NA NA NA 40 PB.8853.1 chr14 - 1443 1 incomplete-splice_match MPZL3 rna48113 4453 6 3006 5 mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 5 PB.786.1 chr1 - 1371 1 genic_intron novelGene_2199 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.696.1 chr1 + 4294 19 full-splice_match ADAMTSL4 rna3754 4332 19 30 8 multi-exon FALSE canonical 4 4 2534 13.7840487521 6 13 0 FALSE 0 0 NA A coding 1076 3228 352 3579 35 PB.4378.1 chr6 - 1450 10 novel_not_in_catalog RNF130 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 41 1519.58250845 32 1 0 TRUE 0 0 NA B coding 419 1257 40 1296 80 PB.7835.2 chr13 + 1746 1 novel_in_catalog ID2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA C coding 141 423 111 533 70 PB.5268.1 chr8 - 1668 9 full-splice_match CLU rna28620 1662 9 -9 3 multi-exon FALSE canonical 32 3974 48 7193.79857933 124 0 0 FALSE 0 0 NA C coding 448 1344 81 1424 15 PB.5268.2 chr8 - 1730 9 full-splice_match CLU rna28619 1792 9 57 5 multi-exon FALSE canonical 32 852 109 7771.74021697 8 0 0 FALSE 0 0 NA C coding 448 1344 142 1485 15 PB.7835.1 chr13 + 1147 3 full-splice_match ID2 rna42453 1396 3 110 139 multi-exon FALSE canonical 48 2074 456 476.49973767 15 0 0 FALSE 0 0 NA C coding 134 402 109 510 15 PB.8469.8 chr14 - 6044 1 genic_intron novelGene_328 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.4378.3 chr6 - 1675 3 novel_not_in_catalog RNF130 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 37 716.499825541 2 2 0 TRUE 0 0 NA B coding 34 102 469 570 85 PB.607.1 chr1 - 3290 4 full-splice_match LRIF1 rna3287 2778 4 32 -544 multi-exon FALSE canonical 33 113 302 283.277249351 4 1 0 FALSE 0 0 NA A coding 760 2280 235 2514 15 PB.8331.7 chr14 - 3124 21 novel_not_in_catalog ADRBK1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 54 431.429020813 5 3 1 TRUE 0 0 NA B coding 647 1941 68 2008 15 PB.4990.1 chr7 + 2791 1 genic_intron novelGene_2185 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.8781.1 chr14 - 1625 3 novel_not_in_catalog CCDC82 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1593 738 3 2 0 TRUE 0 0 NA C non_coding NA NA NA NA 40 PB.4254.11 chr6 - 2996 1 novel_in_catalog CD74 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 5 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 70 PB.7400.2 chr12 + 3035 11 incomplete-splice_match MAP3K2 rna40042 10917 17 583 7299 internal_fragment FALSE canonical 48 955 1012 174.244081679 4 3 0 FALSE 0 0 NA A coding 423 1269 145 1413 70 PB.7241.1 chr11 + 2821 11 full-splice_match MVK rna39258 2877 11 44 12 multi-exon FALSE canonical 13 28 60 41.1217703899 10 0 0 FALSE 0 0 NA A coding 396 1188 75 1262 35 PB.10979.2 chr19 - 1700 6 full-splice_match ATP5SL rna59330 1746 6 43 3 multi-exon FALSE canonical 24 144 45 445.400942972 31 0 0 FALSE 0 0 NA A coding 256 768 28 795 5 PB.2160.1 chr3 - 775 3 full-splice_match HSPB1 rna11562 893 3 112 6 multi-exon FALSE canonical 30 657 404 68 2 1 0 FALSE 0 0 NA A coding 205 615 41 655 20 PB.834.3 chr1 - 1974 10 novel_in_catalog USF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1066 595 387.257020595 2 2 0 FALSE 0 0 NA C coding 244 732 124 855 10 PB.834.2 chr1 - 1811 11 full-splice_match USF1 rna4555 1827 11 14 2 multi-exon FALSE canonical 48 974 918 429.628909642 2 2 0 FALSE 0 0 NA C coding 310 930 205 1134 10 PB.4322.1 chr6 - 2010 4 full-splice_match DUSP1 rna23331 1994 4 -8 -8 multi-exon FALSE canonical 38 384 608 606.572336989 16 1 0 FALSE 0 0 NA A coding 367 1101 242 1342 30 PB.8424.1 chr14 - 2547 1 novel_in_catalog TMEM179B novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 15 PB.834.5 chr1 - 1458 1 incomplete-splice_match ARHGAP30 rna4559 4408 14 2945 6 mono-exon FALSE canonical NA NA NA NA 8 0 NA FALSE 0 0 NA B coding 217 651 68 718 20 PB.11145.1 chr19 + 2084 4 novel_in_catalog ZNF534 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 10 18 132 58 2 4 0 FALSE 0 0 NA A coding 121 363 1480 1842 90 PB.5508.1 chr8 - 1654 1 genic_intron novelGene_2023 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.834.9 chr1 - 4269 13 novel_not_in_catalog ARHGAP30 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1645 415.981970763 2 24 0 TRUE 0 0 NA B coding 380 1140 252 1391 20 PB.8781.2 chr14 - 1608 3 novel_not_in_catalog CCDC82 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1583 738 2 0 0 TRUE 0 0 NA C non_coding NA NA NA NA 20 PB.8277.1 chr14 + 5893 3 novel_in_catalog TSPAN32 novel NA NA NA NA combination_of_known_junctions FALSE canonical 23 80 5617 22.4944437584 2 6 1 FALSE 0 0 NA A coding 44 132 461 592 30 PB.9972.1 chr16 - 3662 12 novel_not_in_catalog PSMD12 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 2963 489.460927961 8 4 0 TRUE 0 0 NA C coding 456 1368 104 1471 15 PB.5172.282 chr7 + 1577 9 fusion LOC708891_LOC106999609 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 323 3566.06407682 2 9 0 TRUE 0 0 NA B coding 353 1059 386 1444 15 PB.5172.283 chr7 + 1600 8 fusion LOC708891_LOC106999609 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 407 3603.62081801 2 10 0 TRUE 0 0 NA B coding 463 1389 78 1466 15 PB.5172.280 chr7 + 1608 8 fusion LOC708891_LOC106999609 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 414 3603.62081801 3 7 0 TRUE 0 0 NA B coding 196 588 893 1480 15 PB.5172.281 chr7 + 1538 9 fusion LOC720839_LOC106999609 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 397 2798.21246513 2 15 0 TRUE 0 0 NA B coding 471 1413 80 1492 25 PB.5172.286 chr7 + 1588 8 fusion LOC708891_LOC106999609 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 364 3715.43254548 2 2 0 TRUE 0 0 NA B coding 358 1074 380 1453 15 PB.5172.287 chr7 + 1592 8 fusion LOC708891_LOC106999609 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 411 3715.43254548 2 7 0 TRUE 0 0 NA B coding 196 588 878 1465 15 PB.5172.284 chr7 + 1534 7 fusion LOC720839_LOC106999609 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 395 2896.72884475 6 4 0 TRUE 0 0 NA B coding 469 1407 78 1484 15 PB.5172.285 chr7 + 1602 8 fusion LOC708891_LOC106999609 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 375 3715.43254548 2 9 0 TRUE 0 0 NA B coding 196 588 881 1468 15 PB.5172.288 chr7 + 1521 6 fusion LOC720839_LOC106999609 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 364 3047.34441769 3 8 0 TRUE 0 0 NA B coding 364 1092 380 1471 15 PB.5172.177 chr7 + 1492 10 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 221 2184.38412373 2 18 0 TRUE 0 0 NA B coding 245 735 712 1446 25 PB.10997.1 chr19 - 974 6 full-splice_match PAFAH1B3 rna59406 1083 6 104 5 multi-exon FALSE canonical 33 61 221 187.827048105 2 1 0 FALSE 0 0 NA A coding 231 693 238 930 5 PB.4254.6 chr6 - 2808 8 novel_in_catalog CD74 novel NA NA NA NA combination_of_known_junctions FALSE canonical 38 996 2154 4136.4661246 2 4 0 FALSE 0 0 NA C coding 272 816 2 817 20 PB.379.5 chr1 - 2644 13 full-splice_match MKNK1 rna2036 2695 13 35 16 multi-exon FALSE canonical 19 39 59 93.1450481776 7 4 0 FALSE 0 0 NA C coding 414 1242 245 1486 10 PB.379.4 chr1 - 2619 13 novel_not_in_catalog MKNK1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 58 99.3931587183 26 4 1 FALSE 0 0 NA C coding 414 1242 224 1465 25 PB.648.2 chr1 + 6072 13 full-splice_match MAN1A2 rna3494 3014 13 -57 -3001 multi-exon FALSE canonical 47 596 2413 1534.017275 3 13 0 FALSE 0 0 NA C coding 641 1923 737 2659 55 PB.9510.5 chr16 + 3817 1 novel_in_catalog ACADVL novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 10 NA FALSE 0 0 NA C coding 112 336 3084 3419 80 PB.9510.2 chr16 + 3017 16 novel_in_catalog ACADVL novel NA NA NA NA combination_of_known_junctions FALSE canonical 25 73 141 2395.67485273 2 6 0 FALSE 0 0 NA C coding 234 702 1787 2488 5 PB.9510.3 chr16 + 2915 17 novel_in_catalog ACADVL novel NA NA NA NA combination_of_known_junctions FALSE canonical 25 73 124 2356.05772425 3 11 0 FALSE 0 0 NA C coding 328 984 1770 2753 10 PB.379.3 chr1 - 2752 14 novel_in_catalog MKNK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 19 39 65 105.123736615 5 3 0 FALSE 0 0 NA C coding 414 1242 352 1593 10 PB.9510.1 chr16 + 2197 20 full-splice_match ACADVL rna51681 2304 20 102 5 multi-exon FALSE canonical 25 73 132 2297.68383378 19 1 0 FALSE 0 0 NA C coding 655 1965 71 2035 10 PB.1642.1 chr2 + 1456 1 genic_intron novelGene_1829 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.379.9 chr1 - 2661 1 novel_in_catalog MKNK1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.379.8 chr1 - 6654 5 novel_in_catalog MKNK1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 0 0 435 87.8066056741 2 12 0 FALSE 0 0 NA C coding 69 207 238 444 70 PB.8877.2 chr14 + 2727 9 novel_in_catalog HINFP novel NA NA NA NA combination_of_known_junctions FALSE canonical 23 49 32 59.7662111899 2 8 0 FALSE 0 0 NA B coding 311 933 1244 2176 15 PB.1681.11 chr2 - 1322 1 genic_intron novelGene_1904 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.1681.10 chr2 - 1557 1 genic_intron novelGene_1903 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.7119.4 chr11 - 1408 13 novel_in_catalog NAP1L1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 1330 111 1570.18884215 3 0 0 FALSE 0 0 NA C coding 368 1104 132 1235 25 PB.9920.2 chr16 + 3926 20 full-splice_match HEATR6 rna53841 4943 20 27 990 multi-exon FALSE canonical 35 150 2985 124.75576139 20 0 0 FALSE 0 0 NA C coding 1181 3543 12 3554 20 PB.9920.1 chr16 + 3085 2 novel_in_catalog HEATR6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 45 199 232 NA 6 3 0 FALSE 0 0 NA C coding 120 360 14 373 70 PB.8469.5 chr14 - 2932 11 novel_not_in_catalog STX3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1088 539.420058952 18 4 0 FALSE 0 0 NA C coding 304 912 222 1133 20 PB.1864.1 chr2 + 2698 1 novel_in_catalog TOPBP1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A coding 141 423 1765 2187 15 PB.3714.1 chr5 + 2641 1 intergenic novelGene_2316 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA B non_coding NA NA NA NA 50 PB.5991.5 chr9 + 4442 15 novel_not_in_catalog SEMA4G novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 54 21.7715410571 5 5 0 FALSE 0 0 NA B coding 839 2517 438 2954 20 PB.7147.1 chr11 - 1464 8 full-splice_match DCN rna38817 2232 8 156 612 multi-exon FALSE canonical 32 6929 165 2497.66851283 76 1 0 FALSE 0 0 NA C coding 359 1077 199 1275 20 PB.10727.1 chr19 + 2792 4 full-splice_match ZNF627 rna57919 2831 4 37 2 multi-exon FALSE canonical 45 303 168 105.0428484 3 1 0 FALSE 0 0 NA A coding 461 1383 166 1548 25 PB.8469.7 chr14 - 2934 10 novel_in_catalog STX3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 514 239 421.767708579 13 4 0 FALSE 0 0 NA C coding 290 870 210 1079 85 PB.9298.1 chr15 - 3384 21 full-splice_match ACO1 rna50451 3507 21 3 120 multi-exon FALSE canonical 37 374 93 349.031517202 38 2 0 FALSE 0 0 NA C coding 889 2667 116 2782 30 PB.7147.2 chr11 - 1620 8 full-splice_match DCN rna38815 2382 8 313 449 multi-exon FALSE canonical 32 5271 158 2993.41143179 38 0 0 FALSE 0 0 NA C coding 359 1077 192 1268 30 PB.10086.2 chr16 + 2028 14 full-splice_match BAIAP2 rna54525 3198 14 20 1150 multi-exon FALSE canonical 8 9 1645 249.062241217 2 0 0 FALSE 0 0 NA C coding 521 1563 111 1673 55 PB.9298.2 chr15 - 3957 22 novel_not_in_catalog ACO1 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 315 516.618814988 2 17 0 TRUE 0 0 NA C coding 821 2463 781 3243 40 PB.2881.1 chr4 + 2990 10 novel_in_catalog DEF6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 17 62 1959 165.671361436 3 1 0 FALSE 0 0 NA C coding 563 1689 949 2637 35 PB.2881.2 chr4 + 2257 11 full-splice_match DEF6 rna15760 2331 11 68 6 multi-exon FALSE canonical 17 62 1224 183.994565137 4 0 0 FALSE 0 0 NA C coding 631 1893 10 1902 30 PB.3484.13 chr5 + 5906 1 genic_intron novelGene_1122 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 6 NA FALSE 0 0 NA A coding 99 297 3091 3387 90 PB.847.1 chr1 - 3141 8 full-splice_match OLFML2B rna4648 3771 8 620 10 multi-exon FALSE canonical 6 16 1134 15.2315462117 13 6 0 FALSE 0 0 NA A coding 753 2259 412 2670 30 PB.371.5 chr1 - 6441 2 novel_not_in_catalog GPBP1L1 novel NA NA NA NA not any annotated donor/acceptor TRUE non_canonical 0 0 5540 NA 3 14 0 TRUE 0 0 NA C non_coding NA NA NA NA 80 PB.371.4 chr1 - 1857 1 genic_intron novelGene_960 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.371.1 chr1 - 2782 12 full-splice_match GPBP1L1 rna1976 3679 12 86 811 multi-exon FALSE canonical 45 338 122 505.291005263 91 1 0 FALSE 0 0 NA C coding 474 1422 1229 2650 35 PB.371.3 chr1 - 2739 12 full-splice_match GPBP1L1 rna1975 3625 12 76 810 multi-exon FALSE canonical 35 267 78 520.206689692 33 2 0 FALSE 0 0 NA C coding 474 1422 1185 2606 35 PB.7273.2 chr11 + 2869 1 genic PTPN11 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 10 PB.7273.1 chr11 + 6076 16 full-splice_match PTPN11 rna39404 2302 16 -19 -3755 multi-exon FALSE canonical 44 634 1584 403.167459004 17 1 0 FALSE 0 0 NA C coding 593 1779 206 1984 15 PB.9360.20 chr15 - 1825 2 novel_in_catalog DOCK8 novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 748 1345 NA 6 2 0 FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.9360.21 chr15 - 2852 1 genic_intron novelGene_1622 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.9360.22 chr15 - 1572 1 genic_intron novelGene_1624 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.9360.23 chr15 - 1652 1 novel_in_catalog DOCK8 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.1919.1 chr2 - 1952 7 full-splice_match CRTAP rna10310 1594 7 63 -421 multi-exon FALSE canonical 38 303 500 101.518471226 16 4 0 FALSE 0 0 NA A coding 401 1203 30 1232 45 PB.2870.1 chr4 - 1463 1 genic NUDT3 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 11 0 NA FALSE 0 0 NA B coding 108 324 389 712 75 PB.5349.1 chr8 - 3363 1 genic_intron novelGene_1103 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA A non_coding NA NA NA NA 15 PB.672.2 chr1 - 1178 8 full-splice_match POLR3GL rna3627 1186 8 6 2 multi-exon FALSE canonical 30 87 81 318.27189634 3 0 0 FALSE 0 0 NA C coding 218 654 123 776 5 PB.672.1 chr1 - 1636 2 genic POLR3GL novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 1617 NA 2 5 1 TRUE 0 0 NA C non_coding NA NA NA NA 55 PB.839.1 chr1 + 1603 14 full-splice_match NDUFS2 rna4586 1733 14 227 -97 multi-exon FALSE canonical 46 1333 108 1392.76056808 156 1 0 FALSE 0 0 NA A coding 463 1389 14 1402 15 PB.6130.1 chr10 - 1143 6 full-splice_match LIME1 rna33484 1593 6 441 9 multi-exon FALSE canonical 7 7 246 79.1770168673 8 0 0 FALSE 0 0 NA A coding 315 945 67 1011 15 PB.5141.1 chr7 + 5575 1 genic_intron novelGene_2481 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.365.2 chr1 + 2713 2 novel_in_catalog UROD novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 1657 69 NA 2 2 0 FALSE 0 0 NA C coding 154 462 96 557 15 PB.5172.390 chr7 + 1540 8 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 371 3623.1896169 3 11 0 TRUE 0 0 NA B coding 196 588 818 1405 15 PB.365.1 chr1 + 1188 10 full-splice_match UROD rna1939 1315 10 122 5 multi-exon FALSE canonical 43 925 650 379.566858406 8 0 0 FALSE 0 0 NA C coding 367 1101 15 1115 15 PB.8036.2 chr13 - 1427 2 genic_intron novelGene_1261 novel NA NA NA NA no_subcategory FALSE canonical 2 3 307 NA 2 2 0 FALSE 0 0 NA B non_coding NA NA NA NA 65 PB.8650.4 chr14 + 3880 11 novel_in_catalog TRIM3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 11 15 113 108.240473022 7 0 0 FALSE 0 0 NA C coding 676 2028 151 2178 20 PB.5172.391 chr7 + 1505 8 fusion LOC720839_LOC711872 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 259 2731.6751271 2 16 0 TRUE 0 0 NA B coding 91 273 37 309 20 PB.8073.5 chr13 + 1316 7 novel_not_in_catalog MXD1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 14 16 919 465.716652054 2 0 0 TRUE 0 0 NA C coding 221 663 199 861 10 PB.8073.4 chr13 + 2002 2 novel_in_catalog MXD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 803 309 NA 3 0 0 FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.5240.12 chr8 + 1873 1 novel_in_catalog TNFRSF10C novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 6 0 NA FALSE 0 0 NA B non_coding NA NA NA NA 75 PB.5240.13 chr8 + 2597 3 novel_in_catalog TNFRSF10C novel NA NA NA NA combination_of_known_junctions FALSE canonical 30 1490 737 74 3 1 0 FALSE 0 0 NA B coding 107 321 634 954 35 PB.8073.1 chr13 + 3216 6 full-splice_match MXD1 rna43717 1239 6 -160 -1817 multi-exon FALSE canonical 47 803 271 197.311935777 232 3 0 FALSE 0 0 NA C coding 221 663 199 861 10 PB.3621.2 chr5 - 1623 7 novel_in_catalog UBE2D3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 6049 453 990.394870746 45 0 0 FALSE 0 0 NA C coding 147 441 366 806 40 PB.5240.16 chr8 + 2541 1 genic TNFRSF10C novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 3 5 NA FALSE 0 0 NA B coding 110 330 527 856 80 PB.11530.1 chr20 + 1785 1 genic LOC106992279 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 5 0 NA FALSE 0 0 NA A coding 111 333 883 1215 95 PB.5172.393 chr7 + 1492 9 novel_not_in_catalog LOC720839 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 348 2811.41814748 2 18 0 TRUE 0 0 NA B coding 141 423 37 459 20 PB.6894.2 chr11 + 3145 2 genic_intron novelGene_881 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 2143 NA 6 1 0 FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.4882.1 chr7 + 2715 1 novel_in_catalog FAM179B novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 8 0 NA FALSE 0 0 NA C coding 652 1956 307 2262 95 PB.5172.394 chr7 + 1551 8 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 375 3623.1896169 2 13 0 TRUE 0 0 NA B coding 196 588 836 1423 15 PB.6406.1 chr10 - 1323 9 novel_in_catalog RRBP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 36 283 454 193.152789263 2 1 0 FALSE 0 0 NA A coding 270 810 8 817 0 PB.4944.2 chr7 + 1821 1 genic_intron novelGene_2055 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.10753.1 chr19 - 1278 7 novel_in_catalog TRMT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 161 86 147.935796885 2 4 0 FALSE 0 0 NA A coding 299 897 226 1122 25 PB.7861.1 chr13 + 2698 1 genic_intron novelGene_463 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 9 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5056.1 chr7 + 1300 9 full-splice_match AHSA1 rna27311 1230 9 74 -144 multi-exon FALSE canonical 47 1552 149 489.988775382 16 0 0 FALSE 0 0 NA A coding 338 1014 70 1083 35 PB.5172.396 chr7 + 1915 9 novel_not_in_catalog LOC711872 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 350 3301.66579169 2 7 0 TRUE 0 0 NA B coding 375 1125 668 1792 35 PB.2118.1 chr3 - 5415 9 novel_in_catalog ADAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 278 3611 56.1248608016 2 11 0 FALSE 0 0 NA A coding 200 600 3829 4428 10 PB.4724.3 chr7 - 4309 22 novel_in_catalog POLG novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 19 41 2435 181.81034074 3 2 0 FALSE 0 0 NA C coding 1192 3576 312 3887 75 PB.6785.1 chr11 + 2651 5 novel_in_catalog KLRF1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 3 3 382 97.0103087306 3 0 0 FALSE 0 0 NA A coding 128 384 49 432 30 PB.5172.397 chr7 + 1562 10 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 316 3510.66930941 5 11 0 TRUE 0 0 NA B coding 196 588 839 1426 15 PB.1911.3 chr2 - 3133 22 incomplete-splice_match SLC4A7 rna10231 7602 24 189 4280 internal_fragment FALSE canonical 27 48 121 412.854695989 2 7 0 FALSE 0 0 NA B coding 1024 3072 62 3133 70 PB.1911.1 chr2 - 3281 22 incomplete-splice_match SLC4A7 rna10233 7557 24 -3 4279 internal_fragment FALSE canonical 38 155 268 401.606772851 5 3 1 FALSE 0 0 NA B coding 1020 3060 221 3280 75 PB.8950.2 chr14 - 2805 6 novel_in_catalog THYN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1775 2277 210.525532893 6 3 0 FALSE 0 0 NA C coding 221 663 1999 2661 40 PB.7737.3 chr12 - 1660 1 genic_intron novelGene_1947 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 10 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.10323.3 chr17 + 5466 13 novel_not_in_catalog DNAJC3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 5264 512.806981232 4 7 0 TRUE 0 0 NA C coding 504 1512 108 1619 25 PB.7737.1 chr12 - 2547 3 full-splice_match PID1 rna41917 1766 3 -191 -590 multi-exon FALSE canonical 30 254 275 106.498826285 2 2 0 FALSE 0 0 NA A coding 217 651 246 896 15 PB.4724.1 chr7 - 4427 23 full-splice_match POLG rna25551 4477 23 44 6 multi-exon FALSE canonical 43 196 922 152.875766556 13 1 0 FALSE 0 0 NA C coding 1228 3684 294 3977 30 PB.4254.3 chr6 - 1246 8 novel_not_in_catalog CD74 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 651 5230.16787493 2 12 0 TRUE 0 0 NA C coding 212 636 3 638 20 PB.3580.2 chr5 - 2779 1 genic PIGY novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 10 PB.3580.1 chr5 - 1317 2 full-splice_match PYURF rna19399 1333 2 1 15 multi-exon FALSE canonical 47 1243 312 NA 38 2 0 FALSE 0 0 NA A coding 114 342 110 451 55 PB.7695.3 chr12 - 3279 9 novel_in_catalog TMBIM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 31 335 38 922.888942398 4 5 0 FALSE 0 0 NA C coding 158 474 83 556 25 PB.6559.4 chr10 + 1725 5 novel_in_catalog APOL6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 986 1136 257.314982074 2 4 0 FALSE 0 0 NA C coding 332 996 165 1160 45 PB.2770.24 chr4 - 1789 1 genic_intron novelGene_565 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.6559.2 chr10 + 3415 6 full-splice_match APOL6 rna35794 1813 6 46 -1648 multi-exon FALSE canonical 35 231 115 501.972110779 12 5 0 FALSE 0 0 NA C coding 332 996 161 1156 40 PB.6559.3 chr10 + 3487 5 novel_not_in_catalog APOL6 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 2174 649.071644736 9 14 0 TRUE 0 0 NA C coding 373 1119 163 1281 90 PB.6559.1 chr10 + 1568 5 novel_in_catalog APOL6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 25 64 1136 622.239503728 6 0 0 FALSE 0 0 NA C coding 327 981 165 1145 25 PB.4681.1 chr7 + 4044 11 full-splice_match IDH3A rna25297 2594 11 -9 -1441 multi-exon FALSE canonical 40 691 51 207.655965481 88 1 0 FALSE 0 0 NA C coding 366 1098 25 1122 75 PB.4681.2 chr7 + 2984 1 genic IDH3A novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C coding 160 480 1019 1498 75 PB.963.1 chr1 + 1420 3 antisense novelGene_NFASC_AS novel NA NA NA NA no_subcategory FALSE canonical 19 85 379 30.495901364 11 0 0 FALSE 0 0 NA A coding 207 621 275 895 25 PB.8398.3 chr14 + 2911 32 full-splice_match MAP4K2 rna45338 2958 32 44 3 multi-exon FALSE canonical 21 30 1311 98.2293235241 3 1 0 FALSE 0 0 NA C coding 812 2436 36 2471 5 PB.8398.2 chr14 + 2916 32 full-splice_match MAP4K2 rna45337 2982 32 64 2 multi-exon FALSE canonical 21 32 111 95.3205119583 18 0 0 FALSE 0 0 NA C coding 820 2460 16 2475 5 PB.1644.5 chr2 - 3151 16 full-splice_match CTNNB1 rna8826 3242 16 54 37 multi-exon FALSE canonical 48 1807 2572 2159.68215254 58 7 0 FALSE 0 0 NA C coding 781 2343 215 2557 50 PB.8416.2 chr14 + 3028 13 novel_not_in_catalog ATL3 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1027 737.615753628 2 3 0 TRUE 0 0 NA B coding 343 1029 41 1069 30 PB.6158.2 chr10 - 3060 8 full-splice_match STX16 rna33662 4366 8 -513 1819 multi-exon FALSE canonical 37 83 803 221.246468898 2 4 0 FALSE 0 0 NA C coding 304 912 723 1634 40 PB.6158.1 chr10 - 5440 1 novel_in_catalog STX16 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 5 2 NA FALSE 0 0 NA C coding 128 384 1539 1922 35 PB.8416.1 chr14 + 3007 12 novel_not_in_catalog ATL3 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1016 638.065827325 11 5 0 TRUE 0 0 NA B coding 343 1029 30 1058 25 PB.735.1 chr1 + 4188 22 full-splice_match NPR1 rna4017 5572 22 1379 5 multi-exon FALSE canonical 22 155 2034 122.417319036 4 3 0 FALSE 0 0 NA A coding 1061 3183 430 3612 15 PB.3613.1 chr5 - 1509 12 full-splice_match EMCN rna19519 4020 12 66 2445 multi-exon FALSE canonical 30 521 685 349.71988791 7 4 0 FALSE 0 0 NA A coding 264 792 109 900 35 PB.9407.9 chr15 - 5629 28 novel_not_in_catalog ZCCHC6 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 4615 664.978947035 3 5 0 TRUE 0 0 NA C coding 1505 4515 172 4686 30 PB.9407.8 chr15 - 6618 1 novel_in_catalog ZCCHC6 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 14 NA FALSE 0 0 NA C non_coding NA NA NA NA 30 PB.4882.3 chr7 + 6408 20 full-splice_match FAM179B rna26451 6443 20 31 4 multi-exon FALSE canonical 39 443 4530 143.861044067 6 1 0 FALSE 0 0 NA C coding 1734 5202 335 5536 25 PB.7695.4 chr12 - 3011 9 novel_in_catalog TMBIM1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 6 7 296 1195.93143616 2 0 0 FALSE 0 0 NA C coding 164 492 1243 1734 25 PB.1688.1 chr2 - 3571 1 novel_in_catalog VPS8 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.9407.7 chr15 - 5524 27 full-splice_match ZCCHC6 rna51115 5567 27 38 5 multi-exon FALSE canonical 44 374 80 594.064811279 8 4 0 FALSE 0 0 NA C coding 1490 4470 112 4581 30 PB.9407.5 chr15 - 5648 27 full-splice_match ZCCHC6 rna51117 5676 27 18 10 multi-exon FALSE canonical 46 471 4645 517.667847176 47 0 0 FALSE 0 0 NA C coding 1490 4470 241 4710 30 PB.11577.1 chr20 + 2020 10 full-splice_match E2F4 rna62494 2070 10 51 -1 multi-exon FALSE canonical 36 240 397 83.7973746605 23 1 0 FALSE 0 0 NA A coding 154 462 777 1238 10 PB.6731.1 chr11 - 3036 1 genic_intron novelGene_149 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.2130.1 chr3 - 2177 1 antisense novelGene_CHST12_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.9586.2 chr16 - 4137 19 full-splice_match SREBF1 rna52092 4892 19 48 707 multi-exon FALSE canonical 5 5 3366 121.573023323 7 6 0 FALSE 0 0 NA C coding 1147 3441 153 3593 10 PB.9854.1 chr16 - 3470 2 novel_not_in_catalog LOC706570 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 32 975 620 NA 14 10 0 FALSE 0 0 NA A coding 391 1173 150 1322 30 PB.6565.4 chr10 - 6634 36 incomplete-splice_match MYH9 rna35856 7188 41 915 -361 5prime_fragment TRUE canonical 45 431 5129 934.712255189 12 2 0 FALSE 0 0 NA C coding 1643 4929 316 5244 10 PB.6565.3 chr10 - 7069 41 full-splice_match MYH9 rna35856 7188 41 110 9 multi-exon FALSE canonical 45 431 5934 1105.20948241 316 4 0 FALSE 0 0 NA C coding 1960 5880 170 6049 10 PB.3588.2 chr5 - 2978 1 genic_intron novelGene_1657 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 24 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.3588.1 chr5 - 3388 2 full-splice_match GPRIN3 rna19414 12133 2 304 8441 multi-exon FALSE canonical 20 50 435 NA 2 0 0 FALSE 0 0 NA C coding 776 2328 562 2889 70 PB.9586.4 chr16 - 4373 20 novel_not_in_catalog SREBF1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 260 121.70045193 3 9 0 FALSE 0 0 NA C coding 1116 3348 483 3830 15 PB.4254.1 chr6 - 1190 8 full-splice_match CD74 rna23035 1464 8 180 94 multi-exon FALSE canonical 47 5648 132 2917.91775073 877 0 0 FALSE 0 0 NA C coding 230 690 8 697 20 PB.6552.2 chr10 + 3047 5 novel_not_in_catalog ISX novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 841 1 8 2 0 TRUE 0 0 NA C coding 245 735 613 1347 25 PB.9058.2 chr15 - 2443 11 novel_in_catalog GLE1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 345 171 325.788274804 2 5 0 FALSE 0 0 NA C coding 549 1647 73 1719 90 PB.9058.1 chr15 - 2452 16 full-splice_match GLE1 rna49206 3334 16 41 841 multi-exon FALSE canonical 46 345 176 278.395402261 55 0 0 FALSE 0 0 NA C coding 698 2094 78 2171 5 PB.5695.3 chr9 + 3170 1 genic_intron novelGene_388 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.4156.2 chr6 + 2879 1 novel_in_catalog DDX46 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 85 PB.4156.1 chr6 + 3590 24 novel_not_in_catalog DDX46 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 2770 308.379636163 2 0 0 FALSE 0 0 NA B coding 1032 3096 161 3256 20 PB.2242.1 chr3 - 1743 7 full-splice_match STK17A rna12059 2698 7 83 872 multi-exon FALSE canonical 47 779 374 618.182820855 37 1 0 FALSE 0 0 NA A coding 414 1242 169 1410 40 PB.2623.1 chr3 + 2348 9 full-splice_match TPK1 rna14092 2363 9 11 4 multi-exon FALSE canonical 31 121 85 84.9882344798 2 3 0 FALSE 0 0 NA A coding 243 729 102 830 45 PB.721.2 chr1 - 3143 7 novel_not_in_catalog POGZ novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 333 156.252999971 6 7 0 FALSE 0 0 NA B coding 356 1068 353 1420 80 PB.7644.1 chr12 + 2568 1 incomplete-splice_match FAM117B rna41240 5920 8 3321 32 mono-exon FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A coding 51 153 185 337 40 PB.3603.1 chr5 + 3277 11 full-splice_match METAP1 rna19485 2694 11 44 -627 multi-exon FALSE canonical 41 584 141 186.177334818 4 2 0 FALSE 0 0 NA C coding 386 1158 28 1185 85 PB.721.1 chr1 - 6599 19 novel_not_in_catalog POGZ novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 310 151.033108953 2 8 0 FALSE 0 0 NA B coding 1402 4206 330 4535 15 PB.4035.1 chr6 - 5158 43 full-splice_match TTC37 rna21940 5718 43 34 526 multi-exon FALSE canonical 45 665 54 524.088732945 13 1 0 FALSE 0 0 NA C coding 1564 4692 282 4973 95 PB.10670.2 chr19 - 3530 6 novel_in_catalog CD209 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 12 77 127 304.272903822 4 0 0 FALSE 0 0 NA B coding 357 1071 22 1092 35 PB.4035.6 chr6 - 1448 1 novel_in_catalog TTC37 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA C non_coding NA NA NA NA 95 PB.5044.1 chr7 + 906 3 full-splice_match BATF rna27215 887 3 5 -24 multi-exon FALSE canonical 33 160 384 3 2 1 0 FALSE 0 0 NA A coding 125 375 217 591 45 PB.10670.1 chr19 - 3599 7 novel_not_in_catalog CD209 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 67 317.282208767 125 5 0 FALSE 0 0 NA B coding 135 405 758 1162 35 PB.4488.1 chr7 + 3011 13 full-splice_match CTDSPL2 rna24319 3349 13 34 304 multi-exon FALSE canonical 46 732 1279 176.875662543 9 2 0 FALSE 0 0 NA C coding 466 1398 168 1565 35 PB.1633.1 chr2 - 2838 1 novel_in_catalog NKTR novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA B non_coding NA NA NA NA 20 PB.3686.3 chr5 - 3194 1 genic_intron novelGene_2281 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.11271.1 chr20 + 1678 10 full-splice_match C20H16orf59 rna61138 1334 10 -4 -340 multi-exon FALSE canonical 0 0 62 15.8429795178 2 0 0 FALSE 0 0 NA A coding 433 1299 37 1335 30 PB.1818.20 chr2 + 1342 6 novel_in_catalog SF3B1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 4955 857 878.138371784 2 0 0 FALSE 0 0 NA C coding 334 1002 12 1013 10 PB.8631.1 chr14 + 3367 18 incomplete-splice_match DENND5A rna46834 4697 22 1321 9 internal_fragment FALSE canonical 46 907 2058 230.945881106 3 0 0 FALSE 0 0 NA A coding 761 2283 250 2532 45 PB.4663.2 chr7 - 3183 11 incomplete-splice_match PTPN9 rna25199 4791 13 1600 8 5prime_fragment FALSE canonical 46 354 1344 232.008620529 2 1 0 FALSE 0 0 NA A coding 439 1317 240 1556 30 PB.12191.1 chrUn_NW_014908087v1 - 1558 1 intergenic novelGene_7 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.8511.4 chr14 + 2800 17 full-splice_match ARFGAP2 rna46037 2966 17 160 6 multi-exon FALSE canonical 35 217 645 545.454856061 17 1 0 FALSE 0 0 NA C coding 535 1605 27 1631 20 PB.509.4 chr1 + 3817 2 genic_intron novelGene_1693 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 2654 NA 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.8511.1 chr14 + 2666 15 novel_in_catalog ARFGAP2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 3 3 1136 492.725075473 2 0 0 FALSE 0 0 NA C coding 476 1428 67 1494 20 PB.8511.2 chr14 + 2739 16 full-splice_match ARFGAP2 rna46036 3005 16 251 15 multi-exon FALSE canonical 47 917 635 371.491588061 187 0 0 FALSE 0 0 NA C coding 521 1563 17 1579 20 PB.8382.9 chr14 - 2926 23 novel_not_in_catalog CAPN1 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 50 432.618769819 8 4 1 TRUE 0 0 NA C coding 714 2142 73 2214 15 PB.8382.6 chr14 - 2981 22 novel_not_in_catalog CAPN1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 3 3 126 388.26150981 8 0 0 FALSE 0 0 NA C coding 714 2142 128 2269 15 PB.8382.7 chr14 - 2900 23 novel_not_in_catalog CAPN1 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 23 426.675520741 18 1 1 TRUE 0 0 NA C coding 714 2142 46 2187 15 PB.8382.4 chr14 - 2903 23 novel_not_in_catalog CAPN1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 26 432.618769819 24 0 0 FALSE 0 0 NA C coding 714 2142 49 2190 15 PB.8382.5 chr14 - 2984 22 novel_not_in_catalog CAPN1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 3 3 142 388.26150981 29 0 0 FALSE 0 0 NA C coding 714 2142 144 2285 45 PB.8382.2 chr14 - 2899 22 full-splice_match CAPN1 rna45266 2973 22 58 16 multi-exon FALSE canonical 29 86 44 378.403224088 61 2 1 FALSE 0 0 NA C coding 714 2142 46 2187 15 PB.8382.3 chr14 - 3057 23 novel_not_in_catalog CAPN1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 72 402.445027302 4 4 1 TRUE 0 0 NA C coding 714 2142 202 2343 15 PB.9050.1 chr15 + 1834 12 full-splice_match C15H9orf114 rna49177 4173 12 223 2116 multi-exon FALSE canonical 31 85 215 79.4795571201 15 0 0 FALSE 0 0 NA A coding 376 1128 8 1135 25 PB.2986.1 chr4 - 7001 11 full-splice_match TRAM2 rna16267 2615 11 -65 -4321 multi-exon FALSE canonical 27 123 991 69.5988505652 3 10 0 FALSE 0 0 NA A coding 370 1110 117 1226 35 PB.5588.1 chr8 + 1921 6 full-splice_match PTP4A3 rna30165 2883 6 25 937 multi-exon FALSE canonical 6 8 107 315.627945531 2 1 0 FALSE 0 0 NA C coding 173 519 952 1470 5 PB.2501.1 chr3 + 2710 7 full-splice_match TES rna13495 2748 7 34 4 multi-exon FALSE canonical 42 521 849 121.835955284 227 3 0 FALSE 0 0 NA A coding 421 1263 148 1410 25 PB.438.1 chr1 - 2825 1 genic_intron novelGene_1227 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.5588.2 chr8 + 1885 6 full-splice_match PTP4A3 rna30167 2874 6 54 935 multi-exon FALSE canonical 9 11 69 314.863462472 3 0 0 FALSE 0 0 NA C coding 173 519 914 1432 5 PB.4917.1 chr7 + 1689 11 full-splice_match STYX rna26581 4876 11 24 3163 multi-exon FALSE canonical 42 309 358 152.187384497 2 2 0 FALSE 0 0 NA A coding 223 669 302 970 45 PB.7188.1 chr11 + 3451 6 full-splice_match SPIC rna39024 1225 6 3 -2229 multi-exon FALSE canonical 12 215 302 49.3862328995 2 6 0 FALSE 0 0 NA A coding 248 744 206 949 10 PB.4180.1 chr6 - 2996 8 novel_in_catalog DNAJC18 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 536 112 158.180276899 29 2 0 FALSE 0 0 NA A coding 358 1074 73 1146 75 PB.8751.2 chr14 + 3106 1 genic_intron novelGene_1541 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1803.6 chr2 - 3927 11 novel_not_in_catalog CCNL1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 44 438 608 690.32745853 2 4 0 FALSE 0 0 NA C coding 299 897 2596 3492 20 PB.9855.2 chr16 + 4068 21 full-splice_match ATP6V0A1 rna53453 4146 21 76 2 multi-exon FALSE canonical 40 177 514 626.647428783 16 0 0 FALSE 0 0 NA C coding 838 2514 92 2605 25 PB.4673.1 chr7 + 2942 1 genic_intron novelGene_1112 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 9 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.9395.1 chr15 - 2842 1 intergenic novelGene_1805 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.9869.1 chr16 + 1164 7 full-splice_match IFI35 rna53522 1019 7 0 -145 multi-exon FALSE canonical 40 231 712 48.4664832642 2 1 0 FALSE 0 0 NA A coding 286 858 151 1008 15 PB.5981.1 chr9 + 1456 2 genic_intron novelGene_1762 novel NA NA NA NA no_subcategory FALSE canonical 0 0 127 NA 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA 55 PB.7125.1 chr11 + 2756 1 novel_in_catalog ZDHHC17 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A coding 115 345 21 365 90 PB.11670.1 chr20 - 1631 1 genic_intron novelGene_1308 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.11477.1 chr20 + 1821 6 full-splice_match PRSS8 rna61997 1604 6 -214 -3 multi-exon FALSE canonical 9 43 934 28.6530975638 42 1 0 FALSE 0 0 NA A coding 343 1029 230 1258 15 PB.10109.1 chr16 - 1638 8 full-splice_match DCXR rna54637 1640 8 1 1 multi-exon FALSE canonical 8 22 107 1484.15699978 8 1 0 FALSE 0 0 NA A coding 244 732 56 787 25 PB.2396.1 chr3 + 5583 14 full-splice_match LMTK2 rna12964 8949 14 10 3356 multi-exon FALSE canonical 34 95 406 429.118864652 18 1 0 FALSE 0 0 NA A coding 1502 4506 307 4812 30 PB.291.8 chr1 - 3380 18 novel_not_in_catalog CSF3R novel NA NA NA NA any annotated donor/acceptor FALSE canonical 5 5 2494 467.8033775 14 1 0 FALSE 0 0 NA B coding 680 2040 455 2494 15 PB.291.9 chr1 - 3014 18 novel_not_in_catalog CSF3R novel NA NA NA NA any annotated donor/acceptor FALSE canonical 12 14 257 397.849217669 2 1 0 FALSE 0 0 NA B coding 704 2112 590 2701 15 PB.9599.3 chr16 - 5534 1 genic_intron novelGene_439 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 15 6 NA FALSE 0 0 NA A coding 147 441 418 858 65 PB.291.7 chr1 - 3054 18 novel_not_in_catalog CSF3R novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1568 462.33429464 83 3 0 FALSE 0 0 NA B coding 432 1296 284 1579 25 PB.12018.3 chrX - 3841 1 novel_in_catalog TSC22D3 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 12 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 40 PB.12018.4 chrX - 3097 2 novel_in_catalog TSC22D3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1448 365 NA 16 0 0 FALSE 0 0 NA C coding 108 324 244 567 40 PB.8519.1 chr14 - 2686 12 full-splice_match CREB3L1 rna46099 2719 12 28 5 multi-exon FALSE canonical 1 1 973 13.9642400438 2 6 0 FALSE 0 0 NA C coding 519 1557 458 2014 20 PB.291.1 chr1 - 3212 18 novel_not_in_catalog CSF3R novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 501 473.09301411 285 1 0 TRUE 0 0 NA B coding 836 2508 440 2947 10 PB.6547.7 chr10 + 1523 8 novel_in_catalog FBXO7 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 5 7 94 770.140246968 2 2 0 FALSE 0 0 NA C coding 366 1098 146 1243 65 PB.6547.6 chr10 + 1600 10 novel_not_in_catalog FBXO7 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 150 947.894508899 2 3 0 TRUE 0 0 NA C coding 366 1098 211 1308 25 PB.5002.1 chr7 + 3214 9 full-splice_match EXD2 rna26970 2012 9 -19 -1183 multi-exon FALSE canonical 33 119 49 127.243860363 31 0 0 FALSE 0 0 NA A coding 620 1860 97 1956 30 PB.6547.4 chr10 + 1722 9 full-splice_match FBXO7 rna35762 1759 9 34 3 multi-exon FALSE canonical 34 216 135 731.352172349 4 0 0 FALSE 0 0 NA C coding 443 1329 99 1427 25 PB.6547.3 chr10 + 1854 9 novel_in_catalog FBXO7 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 33 225 110 728.851150785 33 1 0 FALSE 0 0 NA C coding 366 1098 457 1554 15 PB.6547.2 chr10 + 1964 9 novel_in_catalog FBXO7 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 30 100 372 763.892008074 8 0 0 FALSE 0 0 NA C coding 366 1098 567 1664 15 PB.6547.1 chr10 + 1764 9 full-splice_match FBXO7 rna35761 2151 9 372 15 multi-exon FALSE canonical 47 310 29 705.414062803 31 0 0 FALSE 0 0 NA C coding 366 1098 376 1473 30 PB.6868.1 chr11 - 3420 1 novel_in_catalog IPO8 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA B non_coding NA NA NA NA 75 PB.2217.4 chr3 - 6162 7 novel_in_catalog UPP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 31 89 5964 76.1117599324 2 21 0 FALSE 0 0 NA C coding 103 309 5793 6101 25 PB.4476.1 chr7 - 6158 28 full-splice_match TP53BP1 rna24261 10353 28 52 4143 multi-exon FALSE canonical 37 381 78 353.423258997 13 3 1 FALSE 0 0 NA A coding 1977 5931 72 6002 15 PB.9743.1 chr16 - 1927 16 full-splice_match ACSF2 rna52867 2046 16 68 51 multi-exon FALSE canonical 36 1400 159 703.114499922 5 2 0 FALSE 0 0 NA C coding 618 1854 23 1876 5 PB.4583.1 chr7 + 2720 1 genic SNX1 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 5 5 NA FALSE 0 0 NA C coding 116 348 1686 2033 90 PB.6167.1 chr10 - 2677 6 full-splice_match CASS4 rna33712 4809 6 923 1209 multi-exon FALSE canonical 18 31 654 24.8596057893 2 1 0 FALSE 0 0 NA A coding 786 2358 13 2370 20 PB.1149.1 chr1 + 1282 6 full-splice_match ARV1 rna6262 1328 6 38 8 multi-exon FALSE canonical 39 387 188 30.8382878902 2 0 0 FALSE 0 0 NA A coding 271 813 15 827 45 PB.1923.4 chr2 + 945 1 incomplete-splice_match CMTM6 rna10325 3626 4 2678 4 mono-exon FALSE canonical NA NA NA NA 20 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 20 PB.8876.1 chr14 + 2832 14 full-splice_match C2CD2L rna48223 3060 14 230 -2 multi-exon FALSE canonical 22 49 1328 53.9536838409 2 2 0 FALSE 0 0 NA A coding 557 1671 287 1957 35 PB.1879.2 chr2 - 2931 16 novel_in_catalog COLQ novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 1 1 457 41.3884041731 10 3 0 FALSE 0 0 NA C coding 452 1356 92 1447 0 PB.9861.1 chr16 - 2764 4 antisense novelGene_RAMP2_AS novel NA NA NA NA no_subcategory FALSE canonical 9 14 222 6.8556546004 2 7 0 FALSE 0 0 NA A coding 143 429 158 586 65 PB.10115.1 chr16 - 1838 6 novel_not_in_catalog SECTM1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 19 41 66 66.0151497764 5 1 0 FALSE 0 0 NA A coding 227 681 131 811 55 PB.1816.4 chr2 + 1206 9 incomplete-splice_match HSPD1 rna9676 2237 12 -6 1037 3prime_fragment FALSE canonical 42 562 54 1718.29159341 2 0 0 FALSE 0 0 NA C coding 383 1149 57 1205 60 PB.4806.45 chr7 + 3546 1 genic_intron novelGene_1602 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.6848.1 chr11 + 1497 3 novel_not_in_catalog SSPN novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 124 131 2 2 0 FALSE 0 0 NA C coding 140 420 155 574 65 PB.3446.1 chr5 - 3780 1 intergenic novelGene_1001 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.6848.3 chr11 + 2975 3 full-splice_match SSPN rna37314 4405 3 122 1308 multi-exon FALSE canonical 6 6 179 128 2 2 0 FALSE 0 0 NA C coding 123 369 261 629 70 PB.1816.2 chr2 + 3183 11 novel_in_catalog HSPD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 2691 2394 1518.86602437 6 0 0 FALSE 0 0 NA C coding 563 1689 1035 2723 40 PB.6671.3 chr10 + 2888 1 incomplete-splice_match NUP50 rna36274 4915 8 2018 10 mono-exon FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA C non_coding NA NA NA NA 45 PB.9598.2 chr16 + 1828 11 full-splice_match PRPSAP2 rna52155 1847 11 33 -14 multi-exon FALSE canonical 36 70 99 236.94514133 6 0 0 FALSE 0 0 NA C coding 357 1071 168 1238 25 PB.6671.1 chr10 + 4504 8 full-splice_match NUP50 rna36273 1712 8 -73 -2719 multi-exon FALSE canonical 46 765 310 458.591321331 8 0 0 FALSE 0 0 NA C coding 468 1404 321 1724 90 PB.9881.2 chr16 - 1958 5 full-splice_match TMEM101 rna53589 1753 5 -210 5 multi-exon FALSE canonical 21 58 256 63.7651942677 2 1 0 FALSE 0 0 NA A coding 247 741 495 1235 15 PB.4806.43 chr7 + 1554 5 novel_not_in_catalog LOC711031 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 32 286 50 229.250954196 4 1 0 FALSE 0 0 NA B coding 140 420 86 505 10 PB.4603.11 chr7 - 3193 1 genic_intron novelGene_903 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 17 NA FALSE 0 0 NA A non_coding NA NA NA NA 60 PB.1442.4 chr2 + 2750 1 genic_intron novelGene_1363 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.6322.2 chr10 + 5626 3 novel_not_in_catalog PLAGL2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 108 60 3 1 0 FALSE 0 0 NA C coding 496 1488 223 1710 15 PB.1011.45 chr1 - 1848 1 novel_in_catalog PTPRC novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 5 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.9793.1 chr16 + 2657 5 full-splice_match MRM1 rna53056 1817 5 30 -870 multi-exon FALSE canonical 35 82 723 12.449899598 2 2 0 FALSE 0 0 NA A coding 327 981 182 1162 20 PB.6322.1 chr10 + 5617 3 full-splice_match PLAGL2 rna34443 5664 3 39 8 multi-exon FALSE canonical 7 7 103 56.4977875673 16 1 0 FALSE 0 0 NA C coding 496 1488 218 1705 20 PB.10203.1 chr17 - 2164 4 full-splice_match LHFP rna55104 2468 4 299 5 multi-exon FALSE canonical 34 493 332 79.385137148 2 13 0 FALSE 0 0 NA A coding 200 600 507 1106 35 PB.12127.5 chrX + 7615 43 novel_not_in_catalog FLNA novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 6903 876.324711508 2 3 0 FALSE 0 0 NA B coding 2413 7239 54 7292 5 PB.8863.1 chr14 + 3868 10 novel_in_catalog ARCN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 304 127 809.929009235 200 2 0 FALSE 0 0 NA B coding 488 1464 193 1656 40 PB.7191.1 chr11 + 2891 5 full-splice_match DRAM1 rna39043 3828 5 925 12 multi-exon FALSE canonical 21 46 399 160.878836396 9 3 0 FALSE 0 0 NA C coding 159 477 58 534 20 PB.12127.2 chrX + 8206 46 incomplete-splice_match FLNA rna65607 8483 47 272 5 internal_fragment FALSE canonical 44 632 3949 792.928117801 162 1 0 FALSE 0 0 NA B coding 2612 7836 52 7887 5 PB.12127.1 chrX + 7964 46 novel_not_in_catalog FLNA novel NA NA NA NA any annotated donor/acceptor FALSE canonical 17 45 3179 830.63108538 16 0 0 FALSE 0 0 NA B coding 2530 7590 54 7643 5 PB.7191.2 chr11 + 3153 7 full-splice_match DRAM1 rna39044 1513 7 346 -1986 multi-exon FALSE canonical 33 238 215 85.4458893101 21 3 0 FALSE 0 0 NA C coding 238 714 85 798 20 PB.9032.1 chr15 - 1732 1 novel_in_catalog GPR107 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 5 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.2806.1 chr4 - 3465 1 intergenic novelGene_619 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 10 NA FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.5172.62 chr7 + 1515 8 fusion LOC720839_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 203 2724.88531869 3 7 0 TRUE 0 0 NA B coding 128 384 1 384 20 PB.4978.1 chr7 - 919 2 full-splice_match GPX2 rna26852 1079 2 158 2 multi-exon FALSE canonical 8 11 237 NA 2 0 0 FALSE 0 0 NA C non_coding NA NA NA NA 5 PB.3246.1 chr4 + 3785 1 novel_in_catalog FYN novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A coding 100 300 2943 3242 50 PB.2028.3 chr3 + 2619 10 novel_in_catalog WDR4 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 0 0 666 44.3959457608 2 1 0 FALSE 0 0 NA C coding 379 1137 40 1176 50 PB.5381.1 chr8 - 1293 8 full-splice_match COPS5 rna29233 1278 8 -10 -5 multi-exon FALSE canonical 48 990 521 443.633858041 6 0 0 FALSE 0 0 NA A coding 334 1002 144 1145 40 PB.7739.1 chr12 + 1796 1 antisense novelGene_TRIP12_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8219.5 chr13 + 6864 22 full-splice_match GCC2 rna44438 6892 22 25 3 multi-exon FALSE canonical 17 22 47 244.13520844 2 10 0 FALSE 0 0 NA C coding 1649 4947 96 5042 25 PB.531.2 chr1 + 3256 1 novel_in_catalog RPL5 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 6 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.9325.1 chr15 + 2704 1 genic_intron novelGene_1523 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA A coding 116 348 1623 1970 90 PB.6318.1 chr10 - 5805 5 incomplete-splice_match ASXL1 rna34432 6579 13 771 3 5prime_fragment FALSE canonical 37 268 129 110.385687478 2 7 0 FALSE 0 0 NA A coding 1209 3627 244 3870 15 PB.531.1 chr1 + 1028 8 full-splice_match RPL5 rna2950 1059 8 29 2 multi-exon FALSE canonical 47 16492 78 5633.60728131 36 1 0 FALSE 0 0 NA C coding 297 891 76 966 15 PB.7584.1 chr12 - 1805 2 full-splice_match NEUROD1 rna40932 2953 2 356 792 multi-exon FALSE canonical 8 213 86 NA 3 0 0 FALSE 0 0 NA A coding 356 1068 98 1165 90 PB.1478.2 chr2 + 1097 10 full-splice_match PDHB rna7944 1400 10 6 297 multi-exon FALSE canonical 43 1595 56 1047.96564829 25 0 0 FALSE 0 0 NA C coding 359 1077 15 1091 25 PB.8677.13 chr14 - 7272 26 novel_in_catalog NUMA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 400 228 616.544402294 6 0 0 FALSE 0 0 NA C coding 2118 6354 261 6614 20 PB.5830.1 chr9 + 2701 15 full-splice_match P4HA1 rna31819 2955 15 245 9 multi-exon FALSE canonical 46 608 1251 416.26554025 17 2 0 FALSE 0 0 NA C coding 534 1602 104 1705 35 PB.8677.17 chr14 - 7248 26 full-splice_match NUMA1 rna47153 7148 26 -105 5 multi-exon FALSE canonical 26 79 203 641.022620506 3 1 0 FALSE 0 0 NA C coding 2118 6354 236 6589 20 PB.8677.16 chr14 - 7249 25 novel_in_catalog NUMA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 42 400 246 652.58792511 6 1 0 FALSE 0 0 NA C coding 2104 6312 279 6590 20 PB.8677.15 chr14 - 7376 26 novel_not_in_catalog NUMA1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 5013 664.502821664 2 27 0 FALSE 0 0 NA C coding 1564 4692 162 4853 20 PB.8677.14 chr14 - 7223 26 full-splice_match NUMA1 rna47155 7287 26 60 4 multi-exon FALSE canonical 43 518 5901 600.249114951 26 1 0 FALSE 0 0 NA C coding 2118 6354 210 6563 20 PB.8677.19 chr14 - 7242 25 full-splice_match NUMA1 rna47154 7246 25 -2 6 multi-exon FALSE canonical 42 490 4880 637.439408885 5 3 0 FALSE 0 0 NA C coding 2104 6312 273 6584 20 PB.2288.2 chr3 - 1606 2 full-splice_match PRR15 rna12253 2694 2 1081 7 multi-exon FALSE canonical 1 2 503 NA 16 0 0 FALSE 0 0 NA C coding 129 387 649 1035 35 PB.6124.2 chr10 - 3269 6 full-splice_match PCMTD2 rna33425 1778 6 9 -1500 multi-exon FALSE canonical 43 215 101 547.66230471 28 4 0 FALSE 0 0 NA C coding 360 1080 126 1205 15 PB.7782.1 chr12 - 3015 1 antisense novelGene_LRRFIP1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 3 NA FALSE 0 0 NA A coding 122 366 195 560 15 PB.6124.1 chr10 - 3320 5 novel_in_catalog PCMTD2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 8 9 94 691.504880677 4 8 0 FALSE 0 0 NA C coding 184 552 316 867 10 PB.5172.81 chr7 + 1568 9 fusion LOC708891_LOC711872_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 269 3186.4950965 2 14 0 TRUE 0 0 NA B coding 246 738 695 1432 15 PB.11785.1 chrX + 2685 1 intergenic novelGene_283 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A coding 125 375 1525 1899 50 PB.503.4 chr1 + 3231 15 novel_not_in_catalog CLCA4 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 341 1.73205080757 23 2 0 TRUE 0 0 NA C coding 931 2793 42 2834 50 PB.503.5 chr1 + 3180 14 novel_not_in_catalog CLCA4 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 76 1.73205080757 5 0 0 FALSE 0 0 NA C coding 880 2640 71 2710 45 PB.503.1 chr1 + 3019 14 full-splice_match CLCA4 rna2815 3107 14 64 24 multi-exon TRUE canonical 0 0 341 1.41421356237 324 0 0 FALSE 0 0 NA C coding 931 2793 42 2834 55 PB.503.2 chr1 + 1606 1 novel_in_catalog CLCA4 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 7 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.503.3 chr1 + 3092 3 novel_in_catalog CLCA4 novel NA NA NA NA combination_of_known_junctions FALSE canonical 0 0 342 1 8 1 0 FALSE 0 0 NA C coding 154 462 43 504 70 PB.9783.1 chr16 + 3659 23 full-splice_match OSBPL7 rna53032 3710 23 45 6 multi-exon FALSE canonical 15 21 1140 42.4970587218 2 0 0 FALSE 0 0 NA C coding 842 2526 213 2738 15 PB.9783.2 chr16 + 2953 23 full-splice_match OSBPL7 rna53034 3018 23 56 9 multi-exon FALSE canonical 15 19 2621 46.0543157587 4 0 0 FALSE 0 0 NA C coding 813 2439 202 2640 20 PB.8219.4 chr13 + 2945 8 novel_not_in_catalog GCC2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 67 353.400622524 2 2 0 TRUE 0 0 NA C coding 962 2886 59 2944 55 PB.4802.1 chr7 - 6108 30 incomplete-splice_match CHD8 rna25947 7464 38 1362 -6 5prime_fragment FALSE canonical 45 484 1662 182.846930518 2 5 0 FALSE 0 0 NA B coding 1876 5628 61 5688 10 PB.11604.1 chr20 + 2657 1 incomplete-splice_match ZFP90 rna62630 4433 5 1771 6 mono-exon FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.8219.1 chr13 + 2916 7 incomplete-splice_match GCC2 rna44434 6970 23 37 4017 3prime_fragment FALSE canonical 38 245 56 266.910097224 15 2 0 FALSE 0 0 NA C coding 955 2865 51 2915 30 PB.11123.2 chr19 - 3403 10 novel_in_catalog SIGLEC10 novel NA NA NA NA combination_of_known_junctions FALSE canonical 3 3 1537 129.884564133 2 8 0 FALSE 0 0 NA C coding 473 1419 883 2301 20 PB.9779.1 chr16 - 3208 7 full-splice_match PNPO rna53016 1606 7 10 -1612 multi-exon FALSE canonical 41 324 234 128.378347084 48 2 0 FALSE 0 0 NA A coding 261 783 97 879 20 PB.6612.1 chr10 + 1417 3 novel_not_in_catalog ATF4 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 41 398 190 1236.49989891 35 0 0 TRUE 0 0 NA A coding 351 1053 283 1335 30 PB.7576.1 chr12 + 2817 1 novel_in_catalog PLEKHA3 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 45 PB.8318.3 chr14 + 1576 2 novel_in_catalog CDK2AP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 206 571 NA 2 0 0 FALSE 0 0 NA C coding 115 345 365 709 10 PB.9004.1 chr15 + 3369 18 novel_not_in_catalog RALGDS novel NA NA NA NA any annotated donor/acceptor TRUE canonical 1 1 210 122.930874885 2 10 0 FALSE 0 0 NA B coding 845 2535 79 2613 70 PB.8318.1 chr14 + 899 4 full-splice_match CDK2AP2 rna45003 1278 4 385 -6 multi-exon FALSE canonical 24 45 162 114.734476074 17 1 0 FALSE 0 0 NA C coding 126 378 81 458 10 PB.9004.3 chr15 + 3450 18 novel_not_in_catalog RALGDS novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 501 121.321885907 3 3 0 TRUE 0 0 NA B coding 672 2016 670 2685 85 PB.3153.3 chr4 - 5509 38 incomplete-splice_match UTRN rna17135 11116 74 681 4926 internal_fragment FALSE canonical 46 1592 4476 708.474417322 3 3 0 FALSE 0 0 NA B coding 1828 5484 25 5508 60 PB.6976.1 chr11 - 2691 8 novel_not_in_catalog RARG novel NA NA NA NA any annotated donor/acceptor FALSE canonical 7 9 398 46.0434577329 13 0 0 FALSE 0 0 NA A coding 443 1329 248 1576 10 PB.1638.1 chr2 - 2860 14 novel_not_in_catalog VIPR1 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 1627 55.8390544333 2 3 0 TRUE 0 0 NA B coding 426 1278 94 1371 5 PB.11594.1 chr20 - 6129 28 fusion SLC12A4_LCAT novel NA NA NA NA no_subcategory FALSE canonical 0 0 3222 245.867850684 6 5 0 TRUE 0 0 NA A coding 1085 3255 55 3309 25 PB.5441.5 chr8 - 3883 19 novel_not_in_catalog CDH17 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 301 9.79795897113 2 1 0 TRUE 0 0 NA C coding 832 2496 322 2817 15 PB.4951.1 chr7 + 1442 15 incomplete-splice_match ARID4A rna26701 5964 24 171 4351 3prime_fragment FALSE canonical 41 256 145 137.738883399 5 0 0 FALSE 0 0 NA B coding 413 1239 203 1441 65 PB.5441.7 chr8 - 3332 2 novel_in_catalog CDH17 novel NA NA NA NA combination_of_known_junctions FALSE canonical 3 3 73 NA 7 1 0 FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.5441.6 chr8 - 3558 8 novel_in_catalog CDH17 novel NA NA NA NA combination_of_known_junctions FALSE canonical 3 3 73 9.74679434481 6 3 0 FALSE 0 0 NA C coding 310 930 94 1023 85 PB.5441.1 chr8 - 3162 18 full-splice_match CDH17 rna29544 3744 18 64 518 multi-exon FALSE canonical 3 3 81 8.30662386292 157 0 0 FALSE 0 0 NA C coding 832 2496 102 2597 40 PB.7352.2 chr11 - 3008 4 full-splice_match VPS37B rna39664 3779 4 766 5 multi-exon FALSE canonical 28 76 87 115.792918609 17 2 0 FALSE 0 0 NA C coding 239 717 454 1170 30 PB.7853.2 chr13 + 3267 1 intergenic novelGene_381 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.4827.2 chr7 + 2608 10 novel_in_catalog PSME1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 2449 112 1270.01811011 2 0 0 FALSE 0 0 NA C coding 248 744 74 817 55 PB.1644.1 chr2 - 3294 16 full-splice_match CTNNB1 rna8825 3395 16 95 6 multi-exon FALSE canonical 48 1370 2524 2227.07521202 41 2 0 FALSE 0 0 NA C coding 781 2343 167 2509 15 PB.9719.1 chr16 - 2593 1 genic_intron novelGene_733 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 4 NA FALSE 0 0 NA A coding 139 417 1918 2334 70 PB.3147.1 chr4 + 3035 1 genic_intron novelGene_2047 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1205.8 chr1 + 3546 12 novel_not_in_catalog CNST novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 95 250.629208194 2 11 0 TRUE 0 0 NA C coding 725 2175 292 2466 40 PB.6748.1 chr11 + 3064 20 full-splice_match USP5 rna36749 3104 20 37 3 multi-exon FALSE canonical 43 590 1893 242.86210079 143 1 0 FALSE 0 0 NA C coding 835 2505 9 2513 15 PB.8892.1 chr14 - 3355 1 antisense novelGene_ARHGEF12_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 12 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.9164.1 chr15 + 1512 5 full-splice_match INIP rna49740 4241 5 122 2607 multi-exon FALSE canonical 42 477 397 99.6945334509 8 2 0 FALSE 0 0 NA A coding 104 312 179 490 80 PB.7352.5 chr11 - 2758 4 novel_not_in_catalog VPS37B novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 177 150.933760306 2 4 0 FALSE 0 0 NA C coding 239 717 205 921 25 PB.4827.1 chr7 + 935 11 full-splice_match PSME1 rna26149 956 11 29 -8 multi-exon FALSE canonical 48 2449 79 1209.35106565 15 1 0 FALSE 0 0 NA C coding 249 747 41 787 20 PB.1686.1 chr2 + 3472 7 full-splice_match EHHADH rna9015 2335 7 46 -1183 multi-exon FALSE canonical 25 1529 346 290.611424414 24 0 0 FALSE 0 0 NA A coding 627 1881 284 2164 45 PB.12145.1 chrX - 1648 6 full-splice_match CLIC2 rna65688 1262 6 -206 -180 multi-exon FALSE canonical 46 898 651 141.297558365 23 0 0 FALSE 0 0 NA A coding 247 741 252 992 65 PB.9747.1 chr16 + 4732 51 full-splice_match COL1A1 rna52881 5922 51 18 1172 multi-exon FALSE canonical 14 35 2567 170.417135289 78 1 0 FALSE 0 0 NA C coding 261 783 952 1734 80 PB.6736.1 chr11 + 1189 6 full-splice_match CD27 rna36669 1368 6 168 11 multi-exon FALSE canonical 28 177 229 35.2278299076 19 0 0 FALSE 0 0 NA A coding 260 780 94 873 20 PB.10121.1 chr16 + 3888 39 novel_not_in_catalog TBCD novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 258 363.370334507 15 23 0 TRUE 0 0 NA A coding 1187 3561 90 3650 20 PB.6736.3 chr11 + 1688 7 full-splice_match TAPBPL rna36670 1616 7 97 -169 multi-exon FALSE canonical 41 161 1403 194.082456703 36 1 0 FALSE 0 0 NA C coding 468 1404 113 1516 25 PB.6736.2 chr11 + 2957 12 fusion CD27_TAPBPL novel NA NA NA NA no_subcategory FALSE canonical 10 14 1298 212.190951739 2 2 0 FALSE 0 0 NA A coding 302 906 1661 2566 25 PB.6736.4 chr11 + 1839 7 novel_not_in_catalog TAPBPL novel NA NA NA NA any annotated donor/acceptor FALSE canonical 43 184 1408 188.247177934 19 2 0 FALSE 0 0 NA C coding 444 1332 118 1449 25 PB.4295.1 chr6 + 3305 1 antisense novelGene_RNF145_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 13 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1037.1 chr1 + 2996 4 incomplete-splice_match EDEM3 rna5700 6515 20 2186 1333 internal_fragment FALSE canonical 47 685 373 465.874446606 2 0 0 FALSE 0 0 NA B coding 230 690 91 780 80 PB.2988.1 chr4 - 6138 14 full-splice_match ICK rna16286 6175 14 28 9 multi-exon FALSE canonical 26 41 206 60.2743726637 2 5 0 FALSE 0 0 NA A coding 632 1896 379 2274 35 PB.11799.1 chrX - 2860 1 genic_intron novelGene_339 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A coding 108 324 60 383 85 PB.1488.1 chr2 + 3038 1 genic_intron novelGene_1630 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA A coding 111 333 1314 1646 85 PB.4603.12 chr7 - 2153 1 genic_intron novelGene_905 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.8763.1 chr14 - 1062 11 full-splice_match CHORDC1 rna47605 2981 11 -33 1952 multi-exon FALSE canonical 47 826 209 199.872459333 37 0 0 FALSE 0 0 NA A coding 322 966 96 1061 65 PB.7762.1 chr12 - 3369 2 genic_intron novelGene_2002 novel NA NA NA NA no_subcategory TRUE canonical 0 0 438 NA 3 3 1 FALSE 0 0 NA A coding 150 450 811 1260 70 PB.11336.1 chr20 - 3765 23 full-splice_match ZC3H7A rna61486 3827 23 46 16 multi-exon FALSE canonical 27 81 97 205.226703915 5 1 0 FALSE 0 0 NA A coding 971 2913 132 3044 25 PB.1012.1 chr1 + 3137 1 genic_intron novelGene_2527 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5794.10 chr9 + 2775 1 novel_in_catalog ANXA11 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA C coding 125 375 279 653 85 PB.7163.1 chr11 - 3421 5 novel_not_in_catalog TMCC3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 169 116.43882514 7 14 0 TRUE 0 0 NA B coding 446 1338 181 1518 30 PB.3070.1 chr4 - 2154 12 full-splice_match CCNC rna16856 2588 12 430 4 multi-exon FALSE canonical 42 468 479 340.46438874 6 1 0 FALSE 0 0 NA A coding 283 849 134 982 20 PB.4577.5 chr7 - 6089 34 incomplete-splice_match HERC1 rna24762 15159 78 9070 0 5prime_fragment FALSE canonical 47 387 4152 391.566086376 2 0 0 FALSE 0 0 NA B coding 1867 5601 30 5630 15 PB.7986.1 chr13 - 2765 5 novel_not_in_catalog MCFD2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 2643 819.043344396 59 0 0 TRUE 0 0 NA C coding 144 432 59 490 45 PB.4277.2 chr6 + 2824 2 genic_intron novelGene_2357 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 20 NA 6 0 0 FALSE 0 0 NA B non_coding NA NA NA NA 70 PB.4277.1 chr6 + 5745 12 full-splice_match GALNT10 rna23114 5966 12 217 4 multi-exon FALSE canonical 26 58 84 99.4132787911 2 4 0 FALSE 0 0 NA C coding 506 1518 217 1734 15 PB.7986.2 chr13 - 4114 4 full-splice_match MCFD2 rna43333 891 4 62 -3285 multi-exon FALSE canonical 39 409 83 697.224497562 16 0 0 FALSE 0 0 NA C coding 144 432 96 527 50 PB.2644.1 chr3 - 1114 12 full-splice_match CDK5 rna14255 996 12 24 -142 multi-exon FALSE canonical 38 297 626 99.5941765366 2 0 0 FALSE 0 0 NA A coding 292 876 47 922 15 PB.4277.5 chr6 + 2814 1 incomplete-splice_match GALNT10 rna23114 5966 12 3146 7 mono-exon FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA C coding 52 156 186 341 15 PB.4277.4 chr6 + 3403 1 novel_in_catalog GALNT10 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA C coding 111 333 867 1199 65 PB.2513.1 chr3 - 1460 5 novel_in_catalog NDUFA5 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical 0 0 277 1793.95094693 34 3 0 FALSE 0 0 NA A non_coding NA NA NA NA 5 PB.2294.8 chr3 - 1699 12 incomplete-splice_match TAX1BP1 rna12286 3353 17 75 1579 internal_fragment FALSE canonical 47 1718 1140 384.880500935 2 0 0 FALSE 0 0 NA C coding 532 1596 103 1698 65 PB.2294.9 chr3 - 2765 2 novel_in_catalog TAX1BP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 2048 84 NA 2 4 0 FALSE 0 0 NA C coding 108 324 415 738 75 PB.3472.1 chr5 + 1428 1 genic LIN54 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 3 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 50 PB.11085.6 chr19 + 5645 1 genic CD37 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C coding 113 339 3129 3467 95 PB.1392.4 chr2 + 3656 16 novel_not_in_catalog XPC novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 931 433.398200273 5 1 0 FALSE 0 0 NA C coding 428 1284 1568 2851 30 PB.11085.4 chr19 + 2072 7 novel_in_catalog CD37 novel NA NA NA NA combination_of_known_junctions FALSE canonical 24 61 240 350.622303911 7 1 0 FALSE 0 0 NA C coding 201 603 303 905 30 PB.11085.3 chr19 + 2751 6 novel_in_catalog CD37 novel NA NA NA NA combination_of_known_junctions FALSE canonical 24 61 214 356.258333236 9 4 0 FALSE 0 0 NA C coding 87 261 277 537 30 PB.1392.3 chr2 + 3675 17 novel_not_in_catalog XPC novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 947 484.745293943 3 0 0 TRUE 0 0 NA C coding 938 2814 57 2870 30 PB.11085.1 chr19 + 1170 8 full-splice_match CD37 rna59929 1240 8 65 5 multi-exon FALSE canonical 33 327 522 258.520792201 33 1 0 FALSE 0 0 NA C coding 281 843 76 918 30 PB.6872.1 chr11 - 1941 7 full-splice_match AMN1 rna37424 2355 7 408 6 multi-exon FALSE canonical 40 378 54 146.030818665 3 3 0 FALSE 0 0 NA A coding 258 774 17 790 35 PB.3904.6 chr6 + 1781 1 antisense novelGene_LOC106998765_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.3904.5 chr6 + 1625 1 genic_intron novelGene_1042 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.3904.4 chr6 + 3110 26 full-splice_match PARP8 rna21323 6625 26 576 2939 multi-exon FALSE canonical 18 29 371 415.038552426 4 2 0 FALSE 0 0 NA C coding 946 2838 5 2842 30 PB.3904.3 chr6 + 2632 2 novel_in_catalog PARP8 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 645 220 NA 2 7 0 FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.3904.2 chr6 + 2920 26 novel_in_catalog PARP8 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 255 1798 385.713624338 3 1 0 FALSE 0 0 NA C coding 852 2556 137 2692 35 PB.3904.1 chr6 + 3017 27 full-splice_match PARP8 rna21320 6970 27 1015 2938 multi-exon TRUE canonical 38 222 175 395.647570446 3 0 0 FALSE 0 0 NA C coding 852 2556 193 2748 30 PB.7619.1 chr12 + 2845 1 genic_intron novelGene_1575 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.9265.1 chr15 + 1546 8 novel_in_catalog TPM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 1515 671 19780.3722665 2 2 0 FALSE 0 0 NA C coding 303 909 109 1017 20 PB.9265.2 chr15 + 1025 9 full-splice_match TPM2 rna50256 1167 9 134 8 multi-exon FALSE canonical 36 1299 744 20688.6957298 5 1 0 FALSE 0 0 NA C coding 284 852 106 957 20 PB.10264.1 chr17 - 2910 1 intergenic novelGene_677 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.3904.8 chr6 + 2814 25 novel_not_in_catalog PARP8 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 20 28 122 421.914683319 18 0 0 FALSE 0 0 NA C coding 607 1821 718 2538 10 PB.10544.4 chr19 + 2794 12 novel_not_in_catalog PTBP1 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 998 551.674723003 2 11 0 TRUE 0 0 NA C coding 291 873 151 1023 5 PB.9262.1 chr15 + 3266 17 full-splice_match GBA2 rna50243 3642 17 374 2 multi-exon FALSE canonical 39 436 2688 173.441632834 25 0 0 FALSE 0 0 NA C coding 927 2781 184 2964 15 PB.10544.1 chr19 + 2997 14 full-splice_match PTBP1 rna57091 1696 14 57 -1358 multi-exon FALSE canonical 11 17 935 494.370306552 71 2 0 FALSE 0 0 NA C coding 500 1500 137 1636 5 PB.10544.2 chr19 + 3167 15 full-splice_match PTBP1 rna57090 1774 15 57 -1450 multi-exon FALSE canonical 34 175 478 474.970525401 143 1 0 FALSE 0 0 NA C coding 526 1578 137 1714 5 PB.10544.3 chr19 + 3415 8 novel_in_catalog PTBP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 37 175 515 534.063666617 2 2 0 FALSE 0 0 NA C coding 359 1077 174 1250 75 PB.5596.1 chr8 - 3293 12 full-splice_match ZC3H3 rna30224 3377 12 78 6 multi-exon FALSE canonical 0 0 2502 28.4780617318 21 2 0 FALSE 0 0 NA C coding 950 2850 11 2860 10 PB.213.1 chr1 - 2645 1 genic_intron novelGene_582 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.10923.3 chr19 + 2748 5 full-splice_match HKR1 rna58989 2872 5 107 17 multi-exon FALSE canonical 25 91 201 52.9055762656 2 0 0 FALSE 0 0 NA C coding 639 1917 169 2085 20 PB.5172.361 chr7 + 1576 8 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 377 3623.1896169 3 13 0 TRUE 0 0 NA B coding 470 1410 38 1447 15 PB.5172.360 chr7 + 1534 8 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 318 3623.1896169 4 3 0 TRUE 0 0 NA B coding 196 588 823 1410 10 PB.5172.363 chr7 + 1558 8 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 392 3623.1896169 2 17 0 TRUE 0 0 NA B coding 196 588 853 1440 5 PB.5172.362 chr7 + 1560 7 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 388 3596.74644644 31 8 0 TRUE 0 0 NA B coding 196 588 841 1428 15 PB.5172.365 chr7 + 1560 8 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 377 3623.1896169 2 11 0 TRUE 0 0 NA B coding 196 588 845 1432 15 PB.5331.1 chr8 - 3011 14 novel_in_catalog PRKDC novel NA NA NA NA combination_of_known_junctions TRUE canonical 47 1332 1385 388.21643448 2 2 0 FALSE 0 0 NA B coding 484 1452 738 2189 25 PB.5172.367 chr7 + 1572 8 novel_not_in_catalog LOC708891 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 318 3769.43483827 2 12 0 TRUE 0 0 NA B coding 196 588 850 1437 15 PB.7696.21 chr12 + 2499 7 full-splice_match CTDSP1 rna41600 2624 7 123 2 multi-exon FALSE canonical 38 228 275 406.441877764 3 3 0 FALSE 0 0 NA C coding 260 780 209 988 10 PB.5351.11 chr8 + 1444 1 incomplete-splice_match LYN rna29072 3366 13 1588 335 mono-exon FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA B non_coding NA NA NA NA 35 PB.5172.368 chr7 + 1893 8 novel_not_in_catalog LOC711872 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 293 3396.0984968 4 5 0 TRUE 0 0 NA B coding 375 1125 645 1769 35 PB.12078.1 chrX - 2681 9 full-splice_match GPC4 rna65098 2697 9 -459 475 multi-exon FALSE canonical 21 53 689 65.7343137182 4 0 0 FALSE 0 0 NA A coding 556 1668 530 2197 30 PB.7605.1 chr12 + 4451 7 full-splice_match MFSD6 rna41062 4679 7 3 225 multi-exon FALSE canonical 35 172 149 99.8899394334 3 3 0 FALSE 0 0 NA A coding 793 2379 203 2581 50 PB.659.1 chr1 - 3996 15 novel_in_catalog NOTCH2 novel NA NA NA NA combination_of_known_junctions TRUE canonical 36 162 273 354.873216797 2 4 0 FALSE 0 0 NA B coding 832 2496 201 2696 85 PB.7762.2 chr12 - 1566 1 genic_intron novelGene_2003 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.6225.1 chr10 - 3087 3 novel_in_catalog SNX21 novel NA NA NA NA combination_of_known_junctions FALSE canonical 10 20 475 23 6 1 0 FALSE 0 0 NA A coding 184 552 596 1147 20 PB.9364.5 chr15 - 1485 1 novel_in_catalog PTAR1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 6 1 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.9364.4 chr15 - 1679 8 novel_not_in_catalog PTAR1 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 1013 410.526491228 2 1 0 FALSE 0 0 NA C coding 348 1044 6 1049 75 PB.5172.452 chr7 + 1516 7 fusion LOC720839_LOC721089 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 401 1909.99005233 2 6 0 TRUE 0 0 NA B coding 245 735 735 1469 25 PB.9364.3 chr15 - 1667 8 full-splice_match PTAR1 rna50884 10164 8 57 8440 multi-exon FALSE canonical 37 161 1001 362.758873082 7 1 0 FALSE 0 0 NA C coding 401 1203 20 1222 75 PB.9364.2 chr15 - 1751 7 full-splice_match PTAR1 rna50885 10247 7 56 8440 multi-exon FALSE canonical 47 609 105 220.834779869 14 2 0 FALSE 0 0 NA C coding 429 1287 20 1306 75 PB.11420.3 chr20 + 5983 1 genic_intron novelGene_584 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 10 NA FALSE 0 0 NA A coding 113 339 3876 4214 90 PB.6613.2 chr10 - 3178 3 novel_in_catalog RPS19BP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 80 68 558 4 5 0 FALSE 0 0 NA B coding 111 333 17 349 15 PB.6613.1 chr10 - 3407 2 novel_in_catalog RPS19BP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 80 105 NA 2 6 0 FALSE 0 0 NA B coding 111 333 54 386 15 PB.7572.1 chr12 + 3259 20 full-splice_match AGPS rna40858 7745 20 125 4361 multi-exon FALSE canonical 48 337 282 349.682713327 16 1 0 FALSE 0 0 NA A coding 660 1980 17 1996 25 PB.11813.2 chrX - 2884 22 full-splice_match RPS6KA3 rna63483 8096 22 389 4823 multi-exon FALSE canonical 37 273 63 216.420886238 2 1 0 FALSE 0 0 NA A coding 728 2184 31 2214 10 PB.9816.1 chr16 + 4462 27 full-splice_match ERBB2 rna53230 4660 27 109 89 multi-exon FALSE canonical 11 28 247 126.281431731 14 0 0 FALSE 0 0 NA A coding 1255 3765 175 3939 20 PB.7333.1 chr11 - 2043 6 full-splice_match OASL rna39584 2101 6 32 26 multi-exon FALSE canonical 30 135 735 59.2790013411 42 0 0 FALSE 0 0 NA C coding 515 1545 255 1799 65 PB.332.2 chr1 + 1833 2 novel_in_catalog PPCS novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 112 1024 NA 2 0 0 FALSE 0 0 NA C coding 209 627 24 650 30 PB.9486.1 chr16 + 3447 25 full-splice_match PLD2 rna51505 3504 25 56 1 multi-exon FALSE canonical 16 21 78 35.312887166 5 1 0 FALSE 0 0 NA A coding 932 2796 83 2878 15 PB.2523.10 chr3 + 2908 1 genic_intron novelGene_2377 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.12070.1 chrX - 4207 9 full-splice_match ELF4 rna65046 4176 9 -44 13 multi-exon FALSE canonical 17 30 222 62.0805927807 7 3 0 FALSE 0 0 NA C coding 662 1986 432 2417 20 PB.4954.2 chr7 + 1621 7 full-splice_match JKAMP rna26728 2361 7 74 666 multi-exon FALSE canonical 38 173 77 421.163863597 2 1 0 FALSE 0 0 NA C coding 305 915 74 988 40 PB.5591.2 chr8 + 1280 3 full-splice_match LY6E rna30204 1063 3 -216 -1 multi-exon FALSE canonical 43 1805 320 159 5 0 0 FALSE 0 0 NA C coding 131 393 269 661 15 PB.12219.2 chrUn_NW_015073125v1 + 1507 3 intergenic novelGene_18 novel NA NA NA NA no_subcategory FALSE canonical 0 0 276 1.41421356237 7 2 0 FALSE 0 0 NA B coding 87 261 55 315 35 PB.10564.2 chr19 - 5768 1 antisense novelGene_DAZAP1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.7092.1 chr11 + 2963 3 novel_not_in_catalog LOC107000924 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 16 29 215 116 2 0 0 FALSE 0 0 NA A coding 105 315 1834 2148 50 PB.10564.1 chr19 + 1723 12 full-splice_match DAZAP1 rna57154 1971 12 -141 389 multi-exon FALSE canonical 21 36 1173 406.375442171 3 8 1 FALSE 0 0 NA C coding 365 1095 249 1343 40 PB.2954.2 chr4 + 2618 10 novel_not_in_catalog TJAP1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 738 80.0749648767 8 6 0 TRUE 0 0 NA B coding 358 1074 843 1916 25 PB.2954.1 chr4 + 2512 9 novel_not_in_catalog TJAP1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 637 84.7997641506 3 11 0 FALSE 0 0 NA B coding 358 1074 742 1815 20 PB.636.3 chr1 - 3933 19 novel_not_in_catalog CSDE1 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 573 4524.14898075 2 15 0 TRUE 0 0 NA C coding 668 2004 675 2678 25 PB.1267.2 chr2 + 3434 9 novel_not_in_catalog HHLA2 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 92 9.11043357914 8 5 0 TRUE 0 0 NA B coding 411 1233 227 1459 20 PB.10911.1 chr19 + 1384 11 full-splice_match CAPNS1 rna58873 1924 11 538 2 multi-exon FALSE canonical 39 114 58 1343.9910714 5 1 0 FALSE 0 0 NA A coding 266 798 74 871 15 PB.3529.1 chr5 + 1554 4 full-splice_match JCHAIN rna19099 1413 4 138 -279 multi-exon FALSE canonical 44 11039 277 1951.41666489 245 2 0 FALSE 0 0 NA C coding 159 477 9 485 40 PB.3529.2 chr5 + 1322 5 novel_not_in_catalog JCHAIN novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1296 6038.61913023 8 1 0 TRUE 0 0 NA C coding 159 477 29 505 85 PB.1958.1 chr2 - 2882 1 antisense novelGene_CCDC50_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.624.1 chr1 - 1713 10 full-splice_match PPM1J rna3375 1900 10 181 6 multi-exon FALSE canonical 21 112 354 62.337789502 4 0 0 FALSE 0 0 NA A coding 505 1515 29 1543 25 PB.4884.1 chr7 - 1322 2 novel_not_in_catalog FKBP3 novel NA NA NA NA not any annotated donor/acceptor FALSE canonical 0 0 1030 NA 2 0 0 TRUE 0 0 NA A non_coding NA NA NA NA 75 PB.3341.1 chr5 - 2971 3 genic_intron novelGene_167 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 2955 0 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.6306.1 chr10 + 2550 9 full-splice_match EIF2S2 rna34353 1355 9 -53 -1142 multi-exon FALSE canonical 48 1575 842 926.547894067 53 0 0 FALSE 0 0 NA C coding 333 999 103 1101 20 PB.6306.2 chr10 + 2885 1 novel_in_catalog EIF2S2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 10 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.8654.1 chr14 + 3037 1 genic PRKCDBP novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 6 2 NA FALSE 0 0 NA A coding 137 411 932 1342 80 PB.3734.1 chr5 + 3817 12 full-splice_match TRIM2 rna20270 6777 12 -3 2963 multi-exon FALSE canonical 30 122 145 481.046775272 3 4 0 FALSE 0 0 NA C coding 744 2232 197 2428 85 PB.9705.1 chr16 + 2703 4 full-splice_match SKA2 rna52623 1934 4 63 -832 multi-exon FALSE canonical 39 706 53 315.673882353 7 3 0 FALSE 0 0 NA A coding 121 363 21 383 40 PB.4366.1 chr6 + 2903 7 novel_not_in_catalog ZNF354B novel NA NA NA NA any annotated donor/acceptor FALSE canonical 13 16 159 138.657852284 2 3 0 TRUE 0 0 NA A coding 612 1836 210 2045 35 PB.1949.1 chr2 - 1629 11 full-splice_match EIF4A2 rna10395 1876 11 -13 260 multi-exon FALSE canonical 48 8807 63 4605.4102966 163 0 0 FALSE 0 0 NA C coding 407 1221 35 1255 15 PB.3448.7 chr5 - 6004 1 intergenic novelGene_1004 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A coding 109 327 2898 3224 75 PB.12126.4 chrX - 2630 1 genic_intron novelGene_2322 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A coding 51 153 512 664 80 PB.8993.1 chr15 - 2137 1 genic LOC106993578 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.777.1 chr1 - 1079 6 full-splice_match SSR2 rna4269 1118 6 32 7 multi-exon FALSE canonical 39 2128 44 901.064925519 9 0 0 FALSE 0 0 NA A coding 183 549 45 593 15 PB.12066.1 chrX + 3261 21 full-splice_match XPNPEP2 rna65037 3292 21 69 -38 multi-exon FALSE canonical 4 199 209 143.460796038 8 1 0 FALSE 0 0 NA A coding 674 2022 161 2182 20 PB.2483.1 chr3 - 2937 3 full-splice_match THAP5 rna13431 3341 3 101 303 multi-exon FALSE canonical 46 436 177 98.4987309563 15 2 0 FALSE 0 0 NA A coding 394 1182 95 1276 40 PB.5287.1 chr8 + 3887 12 full-splice_match ERLIN2 rna28772 4836 12 47 902 multi-exon FALSE canonical 38 497 72 310.818274881 10 4 0 FALSE 0 0 NA A coding 339 1017 88 1104 25 PB.2673.4 chr3 + 5641 1 genic DNAJB6 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 4 9 NA FALSE 0 0 NA C coding 105 315 411 725 10 PB.11290.9 chr20 - 3553 11 novel_not_in_catalog MMP25 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 39 25.5342906696 2 0 0 TRUE 0 0 NA B coding 562 1686 239 1924 35 PB.11290.8 chr20 - 3151 9 novel_not_in_catalog MMP25 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 7 7 1253 25.1197133742 2 6 1 FALSE 0 0 NA B coding 478 1434 89 1522 35 PB.2673.1 chr3 + 1484 8 novel_in_catalog DNAJB6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1700 120 883.22533931 82 0 0 FALSE 0 0 NA C coding 241 723 147 869 85 PB.10925.1 chr19 + 3101 5 full-splice_match ZNF540 rna59021 3164 5 57 6 multi-exon FALSE canonical 24 193 412 91.4002188181 2 1 0 FALSE 0 0 NA A coding 660 1980 277 2256 30 PB.2673.2 chr3 + 2512 10 full-splice_match DNAJB6 rna14399 1799 10 15 -728 multi-exon FALSE canonical 37 274 1038 1460.03013668 18 0 0 FALSE 0 0 NA C coding 326 978 141 1118 20 PB.152.2 chr1 + 1175 3 full-splice_match C1QC rna811 1127 3 -52 4 multi-exon FALSE canonical 13 59 105 682 2 3 0 FALSE 0 0 NA C coding 245 735 119 853 40 PB.152.3 chr1 + 1305 3 full-splice_match C1QC rna809 1358 3 44 9 multi-exon FALSE canonical 11 31 231 696 2 7 0 FALSE 0 0 NA C coding 245 735 245 979 30 PB.3501.1 chr5 - 1798 1 genic_intron novelGene_1171 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.152.1 chr1 + 1183 3 full-splice_match C1QC rna810 1197 3 9 5 multi-exon FALSE canonical 25 856 105 283.499559083 34 0 0 FALSE 0 0 NA C coding 245 735 119 853 25 PB.11290.7 chr20 - 4101 9 novel_in_catalog MMP25 novel NA NA NA NA combination_of_known_junctions FALSE canonical 7 7 2202 23.9165214862 2 3 0 FALSE 0 0 NA B coding 498 1494 978 2471 35 PB.9961.1 chr16 + 2733 17 fusion LOC106994095_RGS9 novel NA NA NA NA no_subcategory FALSE canonical 0 0 123 120.337026721 2 8 0 FALSE 0 0 NA A coding 484 1452 67 1518 20 PB.11290.5 chr20 - 2598 10 novel_not_in_catalog MMP25 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 1754 25.5538646784 3 0 0 FALSE 0 0 NA B coding 540 1620 338 1957 35 PB.620.5 chr1 + 1568 1 genic_intron novelGene_1970 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 11 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.5752.2 chr9 + 4142 5 novel_in_catalog LOC699759 novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 539 391 282.611040124 4 27 0 FALSE 0 0 NA A coding 797 2391 85 2475 60 PB.6184.1 chr10 - 1763 1 genic_intron novelGene_311 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A coding 178 534 753 1286 90 PB.8316.1 chr14 - 1572 10 full-splice_match NDUFV1 rna44998 1619 10 40 7 multi-exon FALSE canonical 46 756 808 656.044967971 95 0 0 FALSE 0 0 NA A coding 464 1392 109 1500 10 PB.1772.1 chr2 + 1798 7 full-splice_match GYG1 rna9440 1927 7 126 3 multi-exon FALSE canonical 35 389 106 463.020517904 31 0 0 FALSE 0 0 NA C coding 333 999 100 1098 20 PB.1996.2 chr3 - 5713 38 full-splice_match DIP2A rna10690 5682 38 86 -117 multi-exon FALSE canonical 33 74 3406 151.535474395 34 0 0 FALSE 0 0 NA A coding 1571 4713 131 4843 70 PB.11097.1 chr19 - 1705 11 full-splice_match FUZ rna60022 1798 11 66 27 multi-exon FALSE canonical 24 36 880 131.304988481 2 3 0 FALSE 0 0 NA A coding 418 1254 191 1444 25 PB.2760.1 chr4 + 4342 7 full-splice_match E2F3 rna14801 4541 7 191 8 multi-exon FALSE canonical 22 42 49 55.7763390695 2 9 0 FALSE 0 0 NA C coding 340 1020 32 1051 25 PB.5263.1 chr8 + 4474 14 full-splice_match DPYSL2 rna28593 4598 14 119 5 multi-exon FALSE canonical 42 1112 1928 886.784641274 2 12 0 FALSE 0 0 NA A coding 572 1716 302 2017 10 PB.7286.1 chr11 - 819 1 novel_in_catalog LOC716888 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 0 NA FALSE 0 0 NA A coding 204 612 159 770 95 PB.10189.1 chr17 - 3219 1 novel_in_catalog LOC106994221 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.1289.3 chr2 - 2769 1 incomplete-splice_match NAA50 rna7012 3366 5 592 6 mono-exon FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 25 PB.1289.2 chr2 - 2420 5 full-splice_match NAA50 rna7013 3473 5 -91 1144 multi-exon FALSE canonical 47 649 300 362.180894029 126 0 0 FALSE 0 0 NA C coding 169 507 293 799 70 PB.6699.6 chr10 - 3105 12 novel_not_in_catalog LMF2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1318 104.331203386 2 22 0 TRUE 0 0 NA B coding 468 1404 1265 2668 0 PB.8459.5 chr14 - 3158 14 novel_not_in_catalog CD6 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 40 60.7618301239 2 0 0 TRUE 0 0 NA C coding 667 2001 96 2096 40 PB.600.1 chr1 - 2687 1 genic_intron novelGene_1941 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.8459.7 chr14 - 3070 12 full-splice_match CD6 rna45660 3170 12 88 12 multi-exon FALSE canonical 1 1 601 51.778373864 4 1 0 FALSE 0 0 NA C coding 627 1881 133 2013 30 PB.8459.6 chr14 - 3371 12 novel_in_catalog CD6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 1 1 570 61.2535713245 2 1 0 FALSE 0 0 NA C coding 535 1605 102 1706 35 PB.8459.9 chr14 - 3199 1 genic_intron novelGene_308 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.12120.14 chrX - 1536 5 novel_in_catalog ARHGAP4 novel NA NA NA NA combination_of_known_junctions FALSE canonical 20 48 104 124.903963108 5 0 0 FALSE 0 0 NA C coding 244 732 38 769 95 PB.10327.2 chr17 + 5646 27 novel_not_in_catalog IPO5 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 3420 1126.5975324 2 6 0 TRUE 0 0 NA B coding 1097 3291 7 3297 35 PB.5775.2 chr9 - 1516 6 full-splice_match C9H10orf128 rna31394 1955 6 426 13 multi-exon FALSE canonical 37 222 147 17.4928556845 7 2 0 FALSE 0 0 NA C coding 105 315 51 365 20 PB.5775.1 chr9 - 1487 5 full-splice_match C9H10orf128 rna31393 1929 5 435 7 multi-exon FALSE canonical 23 71 284 74.7462373635 3 0 0 FALSE 0 0 NA C coding 91 273 47 319 20 PB.5970.1 chr9 - 1493 3 full-splice_match SFRP5 rna32546 1881 3 383 5 multi-exon FALSE canonical 25 81 307 4 2 2 0 FALSE 0 0 NA A coding 179 537 193 729 30 PB.10353.1 chr17 + 769 6 full-splice_match TNFSF13B rna55873 4027 6 1799 1459 multi-exon FALSE canonical 40 593 317 57.5152153782 7 0 0 FALSE 0 0 NA A coding 224 672 20 691 80 PB.3448.8 chr5 - 2817 1 intergenic novelGene_1005 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.5186.2 chr8 - 2645 1 genic_intron novelGene_184 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 18 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.9091.4 chr15 - 1582 1 novel_in_catalog ZBTB43 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.9091.3 chr15 - 2980 3 novel_not_in_catalog ZBTB43 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 114 50.4975246918 2 1 0 FALSE 0 0 NA C coding 467 1401 276 1676 70 PB.3294.1 chr4 + 2736 1 full-splice_match C4H6orf120 rna17935 4349 1 154 1459 mono-exon FALSE canonical NA NA NA NA 34 1 NA FALSE 0 0 NA C coding 191 573 280 852 40 PB.9091.1 chr15 - 1648 2 full-splice_match ZBTB43 rna49393 5846 2 24 4174 multi-exon FALSE canonical 36 79 118 NA 7 1 0 FALSE 0 0 NA C coding 467 1401 142 1542 75 PB.1355.1 chr2 + 1676 6 full-splice_match UMPS rna7235 1720 6 -14 58 multi-exon FALSE canonical 39 386 192 73.0410843293 11 1 0 FALSE 0 0 NA A coding 480 1440 37 1476 15 PB.6656.1 chr10 - 2583 16 full-splice_match ARFGAP3 rna36203 2407 16 -8 -168 multi-exon FALSE canonical 41 779 1504 426.211215244 75 0 0 FALSE 0 0 NA A coding 516 1548 94 1641 35 PB.817.8 chr1 - 3079 14 novel_not_in_catalog DCAF8 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 342 1070.36909522 3 10 1 FALSE 0 0 NA C coding 597 1791 443 2233 40 PB.1444.1 chr2 + 2774 11 full-splice_match SHQ1 rna7746 2866 11 85 7 multi-exon FALSE canonical 42 378 198 263.172946938 32 0 0 FALSE 0 0 NA A coding 577 1731 56 1786 30 PB.817.6 chr1 - 6439 13 novel_in_catalog DCAF8 novel NA NA NA NA combination_of_known_junctions FALSE canonical 38 204 39 997.874240573 4 18 0 FALSE 0 0 NA C coding 485 1455 140 1594 35 PB.5297.3 chr8 - 3593 10 full-splice_match WHSC1L1 rna28820 3614 10 10 11 multi-exon FALSE canonical 44 248 463 337.60924158 14 1 0 FALSE 0 0 NA C coding 634 1902 541 2442 20 PB.817.4 chr1 - 3798 14 novel_not_in_catalog DCAF8 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 41 1070.36909522 2 4 2 FALSE 0 0 NA C coding 597 1791 142 1932 5 PB.817.5 chr1 - 3079 14 full-splice_match DCAF8 rna4513 4391 14 281 1031 multi-exon TRUE canonical 48 495 349 979.756092096 7 4 0 FALSE 0 0 NA C coding 597 1791 450 2240 35 PB.817.2 chr1 - 2780 14 full-splice_match DCAF8 rna4507 4061 14 250 1031 multi-exon FALSE canonical 38 204 50 1031.94718857 33 4 0 FALSE 0 0 NA C coding 597 1791 151 1941 35 PB.817.3 chr1 - 2941 14 full-splice_match DCAF8 rna4510 4233 14 261 1031 multi-exon FALSE canonical 47 421 211 992.713453117 24 3 0 FALSE 0 0 NA C coding 597 1791 312 2102 35 PB.5297.4 chr8 - 1079 2 incomplete-splice_match WHSC1L1 rna28820 3614 10 9 2526 internal_fragment FALSE canonical 44 248 464 NA 2 1 0 FALSE 0 0 NA C coding 179 537 542 1078 65 PB.817.1 chr1 - 2783 13 novel_not_in_catalog DCAF8 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 115 1110.57102429 24 5 1 TRUE 0 0 NA C coding 597 1791 147 1937 40 PB.5560.3 chr8 - 3750 12 novel_not_in_catalog FAM49B novel NA NA NA NA any annotated donor/acceptor FALSE canonical 27 86 193 1084.25366036 2 10 0 TRUE 0 0 NA B coding 324 972 243 1214 30 PB.5560.2 chr8 - 3671 13 novel_not_in_catalog FAM49B novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 113 1244.99598393 3 2 0 TRUE 0 0 NA B coding 324 972 163 1134 30 PB.1786.3 chr2 + 2098 14 full-splice_match EIF2A rna9491 2206 14 105 3 multi-exon FALSE canonical 41 1014 564 618.811764594 13 1 0 FALSE 0 0 NA C coding 585 1755 16 1770 25 PB.4838.1 chr7 + 1379 2 full-splice_match LTB4R rna26202 4859 2 2387 1093 multi-exon FALSE canonical 24 278 85 NA 27 0 0 FALSE 0 0 NA A coding 352 1056 101 1156 15 PB.2640.1 chr3 + 1454 3 full-splice_match GIMAP1-GIMAP5 rna14226 2191 3 661 76 multi-exon FALSE canonical 43 1302 17 138.49909747 187 0 0 FALSE 0 0 NA C coding 307 921 24 944 30 PB.8124.1 chr13 + 2614 9 full-splice_match MAT2A rna44024 2614 9 168 -168 multi-exon FALSE canonical 48 1280 874 639.935152965 116 0 0 FALSE 0 0 NA C coding 332 996 113 1108 10 PB.833.1 chr1 - 1834 10 full-splice_match F11R rna4552 1881 10 91 -44 multi-exon FALSE canonical 44 779 868 216.006944333 43 2 0 FALSE 0 0 NA A coding 299 897 54 950 75 PB.4729.1 chr7 - 5763 1 intergenic novelGene_1354 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 6 NA FALSE 0 0 NA A coding 104 312 5184 5495 80 PB.5560.8 chr8 - 2998 1 antisense novelGene_LOC106999945_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 10 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.8124.2 chr13 + 3444 8 novel_in_catalog MAT2A novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1280 1071 588.72829047 22 2 0 FALSE 0 0 NA C coding 362 1086 121 1206 20 PB.5098.2 chr7 - 3285 6 novel_in_catalog BTBD7 novel NA NA NA NA combination_of_known_junctions FALSE canonical 26 94 225 216.677179232 2 10 0 FALSE 0 0 NA B coding 546 1638 332 1969 65 PB.5477.2 chr8 - 783 1 incomplete-splice_match YWHAZ rna29704 2972 6 1084 1106 mono-exon FALSE canonical NA NA NA NA 10 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 20 PB.5477.3 chr8 - 3017 7 full-splice_match YWHAZ rna29701 3143 7 -31 157 multi-exon FALSE canonical 5 6 109 4800.84919572 11 2 0 FALSE 0 0 NA C coding 245 735 332 1066 20 PB.8367.2 chr14 - 1991 13 full-splice_match KAT5 rna45209 2317 13 322 4 multi-exon FALSE canonical 40 81 323 344.503991269 3 2 0 FALSE 0 0 NA C coding 302 906 672 1577 25 PB.5098.1 chr7 - 3787 9 incomplete-splice_match BTBD7 rna27555 4030 11 925 -682 5prime_fragment FALSE canonical 34 184 1396 154.738489071 2 1 0 FALSE 0 0 NA B coding 954 2862 1 2862 40 PB.5477.4 chr8 - 2748 6 full-splice_match YWHAZ rna29703 2979 6 77 154 multi-exon FALSE canonical 38 542 48 3994.57331889 42 2 0 FALSE 0 0 NA C coding 261 783 12 794 20 PB.11622.1 chr20 - 1708 9 full-splice_match NOB1 rna62673 1708 9 -4 4 multi-exon FALSE canonical 30 58 740 159.273349937 29 0 0 FALSE 0 0 NA A coding 412 1236 15 1250 10 PB.5477.8 chr8 - 2850 6 full-splice_match YWHAZ rna29706 3201 6 197 154 multi-exon FALSE canonical 45 591 150 3975.22213216 4 2 0 FALSE 0 0 NA C coding 245 735 162 896 20 PB.5477.9 chr8 - 2970 7 novel_not_in_catalog YWHAZ novel NA NA NA NA any annotated donor/acceptor FALSE canonical 16 34 70 4152.21338565 5 1 0 FALSE 0 0 NA C coding 245 735 281 1015 25 PB.10930.1 chr19 + 1475 7 full-splice_match SPINT2 rna59057 1582 7 110 -3 multi-exon FALSE canonical 43 1576 357 1826.60504762 127 0 0 FALSE 0 0 NA A coding 252 756 252 1007 25 PB.9624.1 chr16 - 1366 5 full-splice_match UNC119 rna52292 1398 5 28 4 multi-exon FALSE canonical 44 365 278 258.259559358 15 5 0 FALSE 0 0 NA A coding 145 435 344 778 5 PB.8367.4 chr14 - 1969 14 full-splice_match KAT5 rna45207 2223 14 249 5 multi-exon FALSE canonical 39 81 302 372.759976392 2 3 0 FALSE 0 0 NA C coding 513 1539 18 1556 25 PB.3825.1 chr6 + 1888 11 full-splice_match CCT5 rna20862 3356 11 70 1398 multi-exon FALSE canonical 48 3643 1221 658.482346005 109 0 0 FALSE 0 0 NA C coding 541 1623 43 1665 30 PB.901.4 chr1 + 2763 18 novel_in_catalog EPRS novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 10 12 689 678.056782283 2 2 0 FALSE 0 0 NA B coding 665 1995 768 2762 75 PB.7254.1 chr11 - 2623 1 incomplete-splice_match PPTC7 rna39320 4877 7 2141 114 mono-exon FALSE canonical NA NA NA NA 2 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.3825.2 chr6 + 2946 1 novel_in_catalog CCT5 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 6 5 NA FALSE 0 0 NA C non_coding NA NA NA NA 75 PB.10950.1 chr19 + 3455 4 full-splice_match MED29 rna59159 2285 4 69 -1239 multi-exon FALSE canonical 33 211 371 180.585159966 22 1 0 FALSE 0 0 NA A coding 200 600 12 611 15 PB.7610.14 chr12 - 2593 23 novel_not_in_catalog STAT1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 138 1233.81197919 205 13 1 TRUE 0 0 NA C coding 712 2136 294 2429 80 PB.6040.1 chr9 - 1673 1 antisense novelGene_MXI1_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.5761.1 chr9 + 2878 5 full-splice_match TMEM72 rna31274 3007 5 125 4 multi-exon FALSE canonical 2 62 382 31.874754901 2 3 0 FALSE 0 0 NA A coding 276 828 174 1001 20 PB.3964.4 chr6 + 5666 14 novel_in_catalog NAIP novel NA NA NA NA no_combination_of_known_junctions TRUE canonical 11 14 1093 111.503363178 3 0 0 FALSE 0 0 NA C coding 985 2955 1244 4198 45 PB.51.1 chr1 + 2688 1 genic_intron novelGene_139 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.11093.1 chr19 - 960 6 full-splice_match RRAS rna59984 973 6 10 3 multi-exon FALSE canonical 19 55 175 60.9179776421 2 0 0 FALSE 0 0 NA A coding 218 654 23 676 25 PB.3964.3 chr6 + 5760 15 full-splice_match NAIP rna21585 5913 15 156 -3 multi-exon FALSE canonical 27 163 1093 78.7845162453 9 1 0 FALSE 0 0 NA C coding 1403 4209 72 4280 40 PB.10465.1 chr18 - 620 7 full-splice_match RPL17 rna56581 688 7 63 5 multi-exon FALSE canonical 48 9828 22 15173.1074602 2 1 1 FALSE 0 0 NA A coding 184 552 36 587 30 PB.2875.1 chr4 + 1953 1 genic UHRF1BP1 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.3420.1 chr5 + 1575 11 full-splice_match LIAS rna18599 1318 11 -6 -251 multi-exon FALSE canonical 35 234 666 67.4759216313 2 0 0 FALSE 0 0 NA A coding 372 1116 59 1174 45 PB.11224.9 chr20 + 2824 12 incomplete-splice_match FAM234A rna60866 2925 13 72 29 internal_fragment FALSE canonical 29 147 1078 221.968466229 18 0 0 FALSE 0 0 NA C coding 472 1416 348 1763 30 PB.3737.1 chr5 + 2719 1 antisense novelGene_RNF175_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 18 NA FALSE 0 0 NA B non_coding NA NA NA NA 85 PB.615.1 chr1 + 1605 1 genic_intron novelGene_1958 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 9 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 25 PB.5896.1 chr9 + 2676 1 genic_intron novelGene_1589 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.9968.1 chr16 - 3298 1 genic_intron novelGene_1212 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA A coding 102 306 2366 2671 40 PB.744.2 chr1 - 1538 6 novel_in_catalog C1H1orf43 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 15 18 228 839.002383787 2 3 1 FALSE 0 0 NA C coding 219 657 163 819 60 PB.3078.1 chr4 + 1614 9 full-splice_match RTN4IP1 rna16895 1680 9 60 6 multi-exon FALSE canonical 35 280 1491 91.3071738693 5 1 0 FALSE 0 0 NA A coding 396 1188 409 1596 15 PB.5781.1 chr9 - 3627 9 full-splice_match FAM35A rna31453 3622 9 -10 5 multi-exon FALSE canonical 39 170 126 108.660020247 2 0 0 FALSE 0 0 NA A coding 905 2715 132 2846 30 PB.3713.3 chr5 + 2646 1 intergenic novelGene_2316 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 9 NA FALSE 0 0 NA B non_coding NA NA NA NA 50 PB.1617.1 chr2 - 4148 21 full-splice_match LARS2 rna8684 4169 21 10 11 multi-exon FALSE canonical 35 147 2530 122.339691025 2 5 0 FALSE 0 0 NA A coding 903 2709 127 2835 25 PB.6031.3 chr9 - 6530 7 novel_in_catalog OBFC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 829 763 103.004854255 2 8 0 FALSE 0 0 NA C coding 315 945 535 1479 70 PB.6031.2 chr9 - 1356 10 full-splice_match OBFC1 rna32838 2215 10 22 837 multi-exon FALSE canonical 39 341 35 242.866218318 14 0 0 FALSE 0 0 NA C coding 368 1104 98 1201 20 PB.2403.6 chr3 + 1307 7 novel_in_catalog ARPC1B novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 1349 45 865.745921157 10 0 0 FALSE 0 0 NA B coding 328 984 59 1042 85 PB.7843.3 chr13 + 5948 1 genic_intron novelGene_228 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 17 NA FALSE 0 0 NA A coding 113 339 194 532 85 PB.2403.4 chr3 + 1725 9 novel_in_catalog ARPC1B novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 1349 52 875.948057821 5 0 0 FALSE 0 0 NA B coding 385 1155 66 1220 70 PB.10070.7 chr16 - 3080 17 incomplete-splice_match USP36 rna54450 4538 21 107 1351 internal_fragment FALSE canonical 22 54 2440 145.856093462 25 1 0 FALSE 0 0 NA C coding 952 2856 225 3080 70 PB.2403.2 chr3 + 1717 6 novel_in_catalog ARPC1B novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 1349 87 899.901105678 2 4 0 FALSE 0 0 NA B coding 236 708 101 808 75 PB.918.1 chr1 + 2517 1 genic_intron novelGene_2380 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.10070.2 chr16 - 5921 21 novel_in_catalog USP36 novel NA NA NA NA combination_of_known_junctions FALSE canonical 22 54 2465 141.92251407 3 1 0 FALSE 0 0 NA C coding 1123 3369 250 3618 5 PB.7923.1 chr13 - 4601 36 full-splice_match XDH rna42998 4474 36 76 -203 multi-exon FALSE canonical 3 101 1474 63.5688603013 2 1 0 FALSE 0 0 NA A coding 1333 3999 48 4046 70 PB.1719.1 chr2 - 3112 1 novel_in_catalog ZNF639 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 7 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5077.2 chr7 - 3122 17 full-splice_match RPS6KA5 rna27488 5956 17 58 2776 multi-exon FALSE canonical 39 107 253 76.7072356431 22 2 0 FALSE 0 0 NA C coding 802 2406 151 2556 70 PB.5669.1 chr9 + 4236 1 genic_intron novelGene_260 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A coding 100 300 1835 2134 75 PB.7482.9 chr12 - 2740 1 genic_intron novelGene_710 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.11452.1 chr20 - 1321 7 full-splice_match CD2BP2 rna61906 3329 7 9 1999 multi-exon FALSE canonical 42 799 68 471.986228613 39 0 0 FALSE 0 0 NA A coding 341 1023 95 1117 5 PB.1115.12 chr1 - 2712 1 full-splice_match LOC106994907 rna6154 6329 1 -2215 5832 mono-exon FALSE canonical NA NA NA NA 5 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.10197.1 chr17 + 928 11 full-splice_match EXOSC8 rna55051 1090 11 28 134 multi-exon FALSE canonical 38 380 35 192.893753139 2 1 0 FALSE 0 0 NA C coding 276 828 19 846 40 PB.10197.2 chr17 + 2945 4 novel_in_catalog EXOSC8 novel NA NA NA NA combination_of_known_junctions FALSE canonical 42 848 1476 98.7825895591 3 2 0 FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.7274.1 chr11 + 1648 6 full-splice_match OAS1 rna39412 1590 6 -60 2 multi-exon FALSE canonical 33 225 529 53.7028863284 75 16 0 FALSE 0 0 NA C coding 400 1200 61 1260 25 PB.9912.3 chr16 + 1850 1 genic_intron novelGene_1074 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.7274.3 chr11 + 3415 1 novel_in_catalog OAS1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 12 NA FALSE 0 0 NA C non_coding NA NA NA NA 80 PB.11992.1 chrX - 1766 8 incomplete-splice_match TSPAN6 rna64498 2212 9 439 7 5prime_fragment FALSE canonical 27 469 161 466.312127228 2 0 0 FALSE 0 0 NA A coding 245 735 75 809 45 PB.7858.1 chr13 - 1288 1 full-splice_match SDHD rna42631 1267 1 8 -29 mono-exon FALSE canonical NA NA NA NA 8 1 NA FALSE 0 0 NA C coding 159 477 10 486 80 PB.8110.8 chr13 + 3480 11 novel_in_catalog TTC31 novel NA NA NA NA combination_of_known_junctions FALSE canonical 30 87 1754 95.3152663533 2 12 0 FALSE 0 0 NA C coding 248 744 1407 2150 25 PB.11551.1 chr20 + 2592 20 full-splice_match KATNB1 rna62351 2690 20 89 9 multi-exon FALSE canonical 26 46 1376 80.7712820252 14 0 0 FALSE 0 0 NA C coding 655 1965 331 2295 10 PB.4296.3 chr6 - 3588 11 full-splice_match RNF145 rna23188 3617 11 21 8 multi-exon FALSE canonical 48 436 315 508.73470493 3 25 0 FALSE 0 0 NA C coding 663 1989 352 2340 30 PB.6948.1 chr11 + 5818 4 novel_in_catalog DIP2B novel NA NA NA NA combination_of_known_junctions FALSE canonical 31 144 241 311.539724594 5 9 0 FALSE 0 0 NA A coding 151 453 142 594 80 PB.7357.1 chr11 - 1456 4 full-splice_match RILPL2 rna39703 1226 4 -236 6 multi-exon FALSE canonical 46 562 660 118.203214846 3 2 1 FALSE 0 0 NA A coding 216 648 307 954 25 PB.6528.1 chr10 - 2051 1 intergenic novelGene_1467 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA B coding 115 345 1498 1842 60 PB.5918.1 chr9 - 1534 3 novel_not_in_catalog PANK1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 8 9 472 70 3 3 1 FALSE 0 0 NA B non_coding NA NA NA NA 30 PB.636.12 chr1 - 2717 18 novel_in_catalog CSDE1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 1070 441 3732.87235249 7 7 0 FALSE 0 0 NA C coding 668 2004 540 2543 50 PB.1115.11 chr1 - 5424 2 novel_in_catalog RCSD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 664 187 NA 4 4 0 FALSE 0 0 NA C coding 83 249 182 430 75 PB.7855.1 chr13 + 3511 1 genic_intron novelGene_414 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.2049.1 chr3 - 1602 1 genic_intron novelGene_216 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.79.1 chr1 + 1128 5 full-splice_match AGTRAP rna429 1171 5 43 0 multi-exon FALSE canonical 40 448 102 153.756300684 2 1 0 FALSE 0 0 NA A coding 159 477 76 552 15 PB.1756.2 chr2 + 4044 16 full-splice_match GOLIM4 rna9344 4403 16 354 5 multi-exon FALSE canonical 36 340 1794 401.649100584 8 4 0 FALSE 0 0 NA C coding 676 2028 422 2449 25 PB.8471.1 chr14 + 2674 3 incomplete-splice_match OSBP rna45735 4696 14 2034 -12 internal_fragment FALSE canonical 47 713 128 200 2 0 0 FALSE 0 0 NA A coding 158 474 16 489 15 PB.11424.3 chr20 - 7074 37 full-splice_match GTF3C1 rna61788 7102 37 26 2 multi-exon FALSE canonical 26 39 6126 396.142651074 7 4 0 FALSE 0 0 NA C coding 2109 6327 10 6336 5 PB.11424.5 chr20 - 5953 31 incomplete-splice_match GTF3C1 rna61788 7102 37 1141 8 5prime_fragment FALSE canonical 26 39 5011 380.335378318 2 0 0 FALSE 0 0 NA C coding 1717 5151 71 5221 25 PB.5172.502 chr7 + 1895 7 fusion LOC711872_LOC714894 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 393 3288.5071081 2 2 0 TRUE 0 0 NA A coding 375 1125 648 1772 35 PB.3408.2 chr5 + 2509 1 novel_in_catalog KLF3 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 5 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.747.1 chr1 + 2858 10 novel_not_in_catalog IL6R novel NA NA NA NA any annotated donor/acceptor FALSE canonical 7 11 51 206.797001913 3 0 0 FALSE 0 0 NA C coding 277 831 540 1370 75 PB.11719.1 chr20 - 2873 1 genic_intron novelGene_1426 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.3408.1 chr5 + 1508 6 full-splice_match KLF3 rna18556 1444 6 91 -155 multi-exon FALSE canonical 30 90 51 167.579831722 2 0 0 FALSE 0 0 NA C coding 345 1035 91 1125 20 PB.1970.1 chr2 - 3469 7 novel_not_in_catalog PPP1R2 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 1827 1244.92369244 9 6 0 TRUE 0 0 NA C coding 156 468 473 940 20 PB.1970.2 chr2 - 2614 6 full-splice_match PPP1R2 rna10556 1565 6 -56 -993 multi-exon FALSE canonical 47 1813 422 608.590995661 44 3 0 FALSE 0 0 NA C coding 156 468 448 915 35 PB.3408.5 chr5 + 3545 1 genic KLF3 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 26 0 NA FALSE 0 0 NA C non_coding NA NA NA NA 35 PB.9394.3 chr15 - 1603 1 genic_intron novelGene_1796 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.6928.1 chr11 - 1664 4 full-splice_match TUBA1A rna37724 1661 4 -12 9 multi-exon FALSE canonical 46 3613 105 6023.04540909 145 1 0 FALSE 0 0 NA A coding 451 1353 103 1455 30 PB.1115.10 chr1 - 3827 3 novel_in_catalog RCSD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 664 183 189.499340368 18 4 0 FALSE 0 0 NA C coding 77 231 178 408 65 PB.4905.1 chr7 - 4398 1 genic_intron novelGene_1963 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.10006.2 chr16 - 2063 4 full-splice_match LOC703016 rna54184 1531 4 66 -598 multi-exon FALSE canonical 13 22 266 9 8 2 0 FALSE 0 0 NA A coding 197 591 206 796 10 PB.5164.1 chr7 + 1885 11 full-splice_match PLD4 rna28020 1974 11 93 -4 multi-exon FALSE canonical 18 34 1148 32.1714158843 16 0 0 FALSE 0 0 NA A coding 515 1545 64 1608 10 PB.1193.1 chr1 - 2977 1 genic_intron novelGene_2653 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 8 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.7886.1 chr13 + 2872 1 novel_in_catalog SLC35F6 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 6 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.7886.2 chr13 + 3850 6 full-splice_match SLC35F6 rna42809 1637 6 22 -2235 multi-exon TRUE canonical 35 191 380 44.6766158074 24 3 0 FALSE 0 0 NA C coding 371 1113 59 1171 35 PB.7178.1 chr11 - 2867 3 full-splice_match IKBIP rna38962 3220 3 343 10 multi-exon FALSE canonical 39 160 244 65.4980915753 7 2 0 FALSE 0 0 NA A coding 379 1137 66 1202 40 PB.10187.1 chr17 + 3352 1 genic PDS5B novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 9 0 NA FALSE 0 0 NA B non_coding NA NA NA NA 85 PB.12144.1 chrX + 1585 6 full-splice_match VBP1 rna65686 1782 6 190 7 multi-exon FALSE canonical 42 1306 294 235.896163597 14 2 0 FALSE 0 0 NA A coding 197 591 10 600 40 PB.4440.1 chr7 + 2079 10 incomplete-splice_match SPINT1 rna24096 2912 11 119 714 internal_fragment TRUE canonical 11 47 1004 111.211510196 5 1 0 FALSE 0 0 NA A coding 529 1587 44 1630 15 PB.5675.1 chr9 + 1308 13 full-splice_match CDC123 rna30676 1359 13 178 -127 multi-exon FALSE canonical 48 1001 1042 457.095176085 24 0 0 FALSE 0 0 NA A coding 336 1008 59 1066 25 PB.9138.1 chr15 + 5893 22 full-splice_match TNC rna49628 6292 22 394 5 multi-exon FALSE canonical 12 39 3797 264.682829062 2 3 0 FALSE 0 0 NA C coding 1655 4965 311 5275 10 PB.9138.2 chr15 + 5510 21 novel_in_catalog TNC novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 22 194 3411 240.03958007 32 0 0 FALSE 0 0 NA C coding 1564 4692 198 4889 10 PB.3335.2 chr5 - 2523 13 novel_not_in_catalog JAKMIP1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 2 282 144.222051019 3 2 0 TRUE 0 0 NA A coding 626 1878 430 2307 15 PB.1272.1 chr2 + 5831 1 novel_in_catalog PLCXD2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 13 NA FALSE 0 0 NA A coding 151 453 5128 5580 80 PB.3006.2 chr4 + 2974 10 novel_in_catalog FAM135A novel NA NA NA NA combination_of_known_junctions FALSE canonical 45 424 230 361.229843728 5 1 0 FALSE 0 0 NA C coding 295 885 450 1334 90 PB.7699.1 chr12 - 1899 1 antisense novelGene_PLCD4_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A coding 107 321 809 1129 15 PB.1631.2 chr2 + 1322 4 full-splice_match HIGD1A rna8768 1402 4 75 5 multi-exon FALSE canonical 41 1820 31 1125.63848548 17 0 0 FALSE 0 0 NA C coding 93 279 76 354 20 PB.1323.1 chr2 - 2001 14 full-splice_match HCLS1 rna7139 1968 14 -16 -17 multi-exon FALSE canonical 39 1084 128 396.046714416 143 0 0 FALSE 0 0 NA C coding 475 1425 129 1553 35 PB.11393.1 chr20 + 1585 14 full-splice_match UQCRC2 rna61687 1597 14 93 -81 multi-exon FALSE canonical 47 4150 159 1430.65264827 86 0 0 FALSE 0 0 NA C coding 453 1359 43 1401 15 PB.7862.3 chr13 - 2701 1 genic_intron novelGene_464 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 11 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.11393.3 chr20 + 1516 2 novel_in_catalog UQCRC2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 8445 705 NA 2 1 0 FALSE 0 0 NA C non_coding NA NA NA NA 70 PB.7862.1 chr13 - 6334 21 full-splice_match PUM2 rna42650 6316 21 1 -19 multi-exon FALSE canonical 46 306 1994 522.955064991 2 3 0 FALSE 0 0 NA C coding 1065 3195 272 3466 35 PB.8110.5 chr13 + 2975 12 novel_in_catalog TTC31 novel NA NA NA NA combination_of_known_junctions FALSE canonical 30 87 1250 89.1683800458 6 0 0 FALSE 0 0 NA C coding 340 1020 18 1037 25 PB.9354.1 chr15 - 2483 1 novel_in_catalog SMARCA2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA C coding 160 480 2002 2481 90 PB.12146.1 chrX - 2894 8 full-splice_match TMLHE rna65690 4004 8 -9 1119 multi-exon FALSE canonical 43 341 1314 137.586336531 4 1 0 FALSE 0 0 NA C coding 421 1263 181 1443 30 PB.10867.1 chr19 + 1656 2 full-splice_match PLEKHF1 rna58598 1514 2 35 -177 multi-exon FALSE canonical 4 6 46 NA 14 1 0 FALSE 0 0 NA A coding 279 837 63 899 25 PB.2391.1 chr3 - 1635 11 full-splice_match SGCE rna12896 1702 11 63 4 multi-exon FALSE canonical 32 426 157 296.725462339 5 1 0 FALSE 0 0 NA C coding 437 1311 49 1359 35 PB.11470.1 chr20 - 3050 3 full-splice_match ZNF629 rna61966 5907 3 197 2660 multi-exon FALSE canonical 17 33 152 19 2 0 0 FALSE 0 0 NA A coding 872 2616 186 2801 65 PB.354.2 chr1 + 1001 8 full-splice_match ATP6V0B rna1864 941 8 -64 4 multi-exon FALSE canonical 48 1109 169 985.88691035 7 1 0 FALSE 0 0 NA C coding 205 615 103 717 10 PB.354.3 chr1 + 1679 7 novel_in_catalog ATP6V0B novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1978 1178 777.261860636 4 0 0 FALSE 0 0 NA C coding 158 474 920 1393 10 PB.11559.2 chr20 - 3896 10 novel_not_in_catalog SLC38A7 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1284 47.0956473573 2 9 0 TRUE 0 0 NA A coding 361 1083 365 1447 10 PB.8828.1 chr14 + 1784 1 full-splice_match LOC694565 rna48001 1793 1 24 -15 mono-exon FALSE canonical NA NA NA NA 9 1 NA FALSE 0 0 NA C coding 256 768 724 1491 60 PB.7043.4 chr11 - 2625 18 full-splice_match ARHGAP9 rna38330 2560 18 -75 10 multi-exon FALSE canonical 5 8 155 221.637090759 4 0 0 FALSE 0 0 NA C coding 734 2202 174 2375 10 PB.4883.3 chr7 + 3810 12 novel_in_catalog PRPF39 novel NA NA NA NA combination_of_known_junctions FALSE canonical 43 674 474 160.081229381 2 5 0 FALSE 0 0 NA C coding 273 819 2303 3121 30 PB.2854.1 chr4 + 1444 1 full-splice_match B3GALT4 rna15653 1640 1 197 -1 mono-exon FALSE canonical NA NA NA NA 10 0 NA FALSE 0 0 NA A coding 383 1149 26 1174 10 PB.2914.4 chr4 - 1776 1 genic_intron novelGene_850 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A coding 145 435 735 1169 90 PB.5104.2 chr7 + 1571 5 full-splice_match SERPINA3 rna27617 1605 5 30 4 multi-exon FALSE canonical 20 1188 54 2052.1435135 8 3 1 FALSE 0 0 NA A coding 420 1260 72 1331 10 PB.11871.2 chrX + 2782 5 novel_in_catalog SUV39H1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 26 68 42 27.5136329844 2 9 0 FALSE 0 0 NA C coding 365 1095 24 1118 45 PB.931.1 chr1 + 2126 2 genic_intron novelGene_2425 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 24 NA 9 1 0 FALSE 0 0 NA B non_coding NA NA NA NA 60 PB.11871.1 chrX + 2688 6 full-splice_match SUV39H1 rna63847 2732 6 41 3 multi-exon FALSE canonical 26 68 28 42.3792402008 16 4 0 FALSE 0 0 NA C coding 412 1236 10 1245 45 PB.5118.2 chr7 + 2953 9 novel_in_catalog PAPOLA novel NA NA NA NA combination_of_known_junctions FALSE canonical 47 1361 172 563.726884227 13 1 0 FALSE 0 0 NA C coding 285 855 165 1019 30 PB.5121.1 chr7 + 2141 2 antisense novelGene_BCL11B_AS novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 21 NA 2 6 0 FALSE 0 0 NA B non_coding NA NA NA NA 0 PB.10262.1 chr17 - 6026 2 intergenic novelGene_655 novel NA NA NA NA no_subcategory TRUE non_canonical 0 0 29 NA 2 8 0 FALSE 0 0 NA A coding 182 546 2618 3163 90 PB.4448.1 chr7 - 2903 1 antisense novelGene_LOC106999151_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 50 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.4851.1 chr7 - 2680 3 full-splice_match DTD2 rna26286 1008 3 46 -1718 multi-exon FALSE canonical 44 272 182 292.499572649 20 0 0 FALSE 0 0 NA A coding 168 504 72 575 30 PB.3641.1 chr5 + 2632 2 full-splice_match C5H4orf32 rna19732 982 2 87 -1737 multi-exon FALSE canonical 35 133 279 NA 7 1 0 FALSE 0 0 NA A coding 132 396 127 522 55 PB.5833.4 chr9 - 2969 1 genic_intron novelGene_1208 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.3718.10 chr5 - 3704 1 genic_intron novelGene_2333 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 7 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.8352.2 chr14 + 2777 1 genic_intron novelGene_186 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5833.1 chr9 + 2382 12 full-splice_match MICU1 rna31834 2473 12 71 20 multi-exon FALSE canonical 43 869 763 496.940640318 6 0 0 FALSE 0 0 NA A coding 476 1428 112 1539 40 PB.5696.3 chr9 - 2855 8 fusion LOC107000052_RSU1 novel NA NA NA NA no_subcategory FALSE canonical 46 907 102 328.475265431 5 8 1 TRUE 0 0 NA B coding 243 729 106 834 80 PB.1639.3 chr2 - 6171 11 novel_not_in_catalog TRAK1 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 1199 486.291065104 2 9 0 TRUE 0 0 NA B coding 596 1788 2360 4147 45 PB.5696.1 chr9 - 1414 9 fusion LOC107000052_RSU1 novel NA NA NA NA no_subcategory FALSE canonical 46 907 109 311.141446934 69 1 0 TRUE 0 0 NA B coding 277 831 113 943 20 PB.1639.1 chr2 - 3824 3 novel_not_in_catalog TRAK1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 13 40 888 105 11 1 1 FALSE 0 0 NA B coding 292 876 909 1784 20 PB.8111.4 chr13 - 2781 3 novel_in_catalog AUP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 2030 2600 314.499602543 6 1 0 FALSE 0 0 NA C coding 173 519 418 936 15 PB.8111.5 chr13 - 1627 11 novel_in_catalog AUP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 106 113 837.658044789 4 18 0 FALSE 0 0 NA C coding 474 1422 64 1485 20 PB.467.1 chr1 - 3324 1 antisense novelGene_SRSF11_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5696.4 chr9 - 3173 1 genic_intron novelGene_389 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.3970.2 chr6 + 2848 11 full-splice_match PTCD2 rna21610 5696 11 23 2825 multi-exon FALSE canonical 44 294 1210 243.604187156 2 6 0 FALSE 0 0 NA C coding 383 1149 16 1164 60 PB.4436.1 chr7 + 2705 1 antisense novelGene_RMDN3_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A coding 148 444 1583 2026 75 PB.6590.1 chr10 - 2821 11 novel_in_catalog CSNK1E novel NA NA NA NA combination_of_known_junctions FALSE canonical 18 29 294 211.648293166 2 8 0 FALSE 0 0 NA A coding 416 1248 307 1554 15 PB.5648.1 chr9 + 6474 9 incomplete-splice_match FAM208B rna30573 8813 24 2337 2 internal_fragment FALSE canonical 46 749 5749 173.476223155 4 6 0 FALSE 0 0 NA A coding 1898 5694 57 5750 20 PB.2460.3 chr3 - 2883 1 novel_in_catalog ORC5 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 5 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 90 PB.11195.1 chr19 + 1830 3 novel_in_catalog ZSCAN18 novel NA NA NA NA combination_of_known_junctions FALSE canonical 37 175 141 122 6 7 0 FALSE 0 0 NA C coding 197 591 255 845 90 PB.10459.1 chr18 + 3164 2 genic_intron novelGene_798 novel NA NA NA NA no_subcategory FALSE canonical 25 45 136 NA 3 11 0 FALSE 0 0 NA A coding 100 300 696 995 80 PB.11053.3 chr19 + 1994 9 full-splice_match SAE1 rna59721 2085 9 89 2 multi-exon FALSE canonical 48 388 110 685.160565123 31 2 0 FALSE 0 0 NA C coding 346 1038 13 1050 5 PB.5001.2 chr7 - 2991 9 full-splice_match DCAF5 rna26963 2906 9 -93 8 multi-exon FALSE canonical 41 367 1001 159.565033764 77 2 0 FALSE 0 0 NA C coding 942 2826 123 2948 90 PB.6252.1 chr10 - 1822 1 genic_intron novelGene_510 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.2384.3 chr3 - 5896 3 full-splice_match SAMD9 rna12862 6960 3 110 954 multi-exon FALSE canonical 23 68 70 6.48074069841 2 1 0 FALSE 0 0 NA C coding 1588 4764 239 5002 70 PB.183.8 chr1 - 2032 3 novel_in_catalog RSRP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1525 146 1241 14 0 0 FALSE 0 0 NA C coding 110 330 621 950 75 PB.183.9 chr1 - 2129 1 novel_in_catalog RSRP1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA C non_coding NA NA NA NA 65 PB.11228.1 chr20 - 3147 1 genic_intron novelGene_45 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A coding 133 399 1538 1936 60 PB.6586.2 chr10 + 1812 12 novel_in_catalog EIF3L novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 30 56 324 1381.0586519 2 0 0 FALSE 0 0 NA C coding 456 1368 276 1643 25 PB.8536.4 chr14 - 3753 14 full-splice_match API5 rna46214 3768 14 5 10 multi-exon FALSE canonical 47 734 1655 235.516453778 105 1 0 FALSE 0 0 NA C coding 504 1512 164 1675 10 PB.8536.7 chr14 - 2094 1 novel_in_catalog API5 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA C coding 108 324 145 468 75 PB.6586.1 chr10 + 2652 13 full-splice_match EIF3L rna35928 2445 13 571 -778 multi-exon FALSE canonical 44 2352 915 877.515242033 300 7 0 FALSE 0 0 NA C coding 564 1692 10 1701 30 PB.183.1 chr1 - 1426 5 full-splice_match RSRP1 rna923 1496 5 59 11 multi-exon FALSE canonical 39 659 896 1899.88499652 86 1 0 FALSE 0 0 NA C coding 158 474 621 1094 20 PB.183.2 chr1 - 2649 4 novel_in_catalog RSRP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 48 1525 146 1606.30538815 164 1 0 FALSE 0 0 NA C coding 110 330 621 950 70 PB.8980.1 chr15 + 1706 10 novel_not_in_catalog UBAC1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 388 600.259110718 9 5 0 TRUE 0 0 NA A coding 261 783 488 1270 5 PB.183.4 chr1 - 2906 5 novel_not_in_catalog RSRP1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 25 72 2751 2081.34019324 7 3 0 TRUE 0 0 NA C coding 246 738 213 950 20 PB.183.5 chr1 - 3128 4 novel_not_in_catalog RSRP1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 191 2292.31934948 2 10 1 TRUE 0 0 NA C coding 110 330 718 1047 20 PB.922.1 chr1 - 2763 12 novel_not_in_catalog TRAF5 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1964 218.632111091 2 4 0 TRUE 0 0 NA A coding 557 1671 38 1708 20 PB.2632.1 chr3 - 670 6 full-splice_match RARRES2 rna14199 628 6 26 -68 multi-exon FALSE canonical 20 64 29 2269.14829837 2 0 0 FALSE 0 0 NA A coding 163 489 50 538 5 PB.5332.1 chr8 + 3143 17 full-splice_match MCM4 rna28989 2809 17 22 -356 multi-exon FALSE canonical 9 11 42 216.6794868 70 2 0 FALSE 0 0 NA A coding 863 2589 57 2645 75 PB.9973.10 chr16 + 1621 1 genic_intron novelGene_1237 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8467.2 chr14 + 1074 4 full-splice_match MRPL16 rna45718 1073 4 -14 13 multi-exon FALSE canonical 44 316 173 373.610760016 8 0 0 FALSE 0 0 NA C coding 251 753 119 871 40 PB.8467.1 chr14 + 2970 1 genic MRPL16 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 85 PB.11938.2 chrX + 6383 38 full-splice_match TAF1 rna64288 6236 38 129 -276 multi-exon FALSE canonical 32 101 5071 239.557926189 2 11 0 FALSE 0 0 NA C coding 1907 5721 8 5728 80 PB.11938.3 chrX + 5624 34 novel_not_in_catalog TAF1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 2282 214.906956611 3 2 0 TRUE 0 0 NA C coding 841 2523 2448 4970 80 PB.1979.1 chr2 - 1706 1 intergenic novelGene_2639 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.11938.1 chrX + 6345 37 full-splice_match TAF1 rna64286 7741 37 65 1331 multi-exon FALSE canonical 45 389 2640 203.66884887 12 0 0 FALSE 0 0 NA C coding 1893 5679 12 5690 80 PB.4317.1 chr6 + 3301 10 full-splice_match GABRP rna23301 3350 10 43 6 multi-exon FALSE canonical 0 0 141 2.64575131106 116 1 0 FALSE 0 0 NA A coding 440 1320 184 1503 35 PB.10877.1 chr19 - 1730 15 fusion LOC717332_PEPD novel NA NA NA NA no_subcategory TRUE canonical 17 45 30 540.516419732 57 4 0 FALSE 0 0 NA A coding 386 1158 333 1490 55 PB.829.12 chr1 - 3150 3 full-splice_match CD48 rna4544 1531 3 32 -1651 multi-exon FALSE canonical 40 1483 158 999 2 0 0 FALSE 0 0 NA C coding 294 882 77 958 35 PB.11007.1 chr19 + 2619 3 full-splice_match ZNF576 rna59448 2839 3 217 3 multi-exon FALSE canonical 33 200 261 37 2 2 0 FALSE 0 0 NA A coding 170 510 177 686 30 PB.8364.1 chr14 - 2953 4 full-splice_match OVOL1 rna45199 1755 4 0 -1198 multi-exon FALSE canonical 5 10 364 7.4161984871 30 1 0 FALSE 0 0 NA A coding 267 801 265 1065 20 PB.5640.2 chr9 - 2902 4 novel_in_catalog IDI1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 515 459 166.228758041 2 1 0 FALSE 0 0 NA A coding 132 396 332 727 45 PB.1344.1 chr2 - 3294 1 genic_intron novelGene_943 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5136.1 chr7 - 1744 1 genic_intron novelGene_2473 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 5 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.8778.2 chr14 - 3220 15 full-splice_match MTMR2 rna47695 4437 15 -9 1226 multi-exon FALSE canonical 24 57 224 164.584324892 26 0 0 FALSE 0 0 NA C coding 643 1929 145 2073 20 PB.2030.4 chr3 - 3107 20 novel_not_in_catalog SLC37A1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 3 3 1643 90.1387818866 2 3 0 FALSE 0 0 NA C coding 560 1680 374 2053 55 PB.2030.5 chr3 - 2965 20 novel_not_in_catalog SLC37A1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 3 3 1502 92.0217365626 2 4 0 FALSE 0 0 NA C coding 560 1680 233 1912 50 PB.7510.6 chr12 + 3471 10 novel_not_in_catalog MARCH7 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 105 828.519764399 2 2 0 FALSE 0 0 NA C coding 704 2112 129 2240 20 PB.3215.1 chr4 + 6004 4 novel_in_catalog THEMIS novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 387 834 67.6165660175 2 6 0 FALSE 0 0 NA A coding 609 1827 126 1952 80 PB.5118.1 chr7 + 4469 22 full-splice_match PAPOLA rna27669 4399 22 -67 -3 multi-exon FALSE canonical 47 1361 184 523.564704693 49 1 0 FALSE 0 0 NA C coding 745 2235 177 2411 20 PB.9832.1 chr16 + 1641 4 full-splice_match IGFBP4 rna53292 1650 4 342 -333 multi-exon FALSE canonical 28 394 235 435.203400722 6 1 0 FALSE 0 0 NA A coding 165 495 8 502 15 PB.2030.2 chr3 - 2904 20 full-splice_match SLC37A1 rna10882 3016 20 93 19 multi-exon FALSE canonical 14 23 74 88.7749964799 16 1 0 FALSE 0 0 NA C coding 533 1599 251 1849 55 PB.2030.3 chr3 - 2943 21 novel_not_in_catalog SLC37A1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 1 1 26 92.9838695689 2 2 0 FALSE 0 0 NA C coding 533 1599 290 1888 55 PB.4845.2 chr7 + 2959 15 full-splice_match G2E3 rna26254 5624 15 35 2630 multi-exon FALSE canonical 44 426 115 219.558648201 4 1 0 FALSE 0 0 NA A coding 706 2118 120 2237 80 PB.10782.2 chr19 + 1855 1 genic_intron novelGene_366 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.8108.1 chr13 - 2878 4 full-splice_match MOGS rna43911 3156 4 264 14 multi-exon FALSE canonical 41 155 521 279.932134633 33 0 0 FALSE 0 0 NA A coding 837 2511 170 2680 45 PB.2175.1 chr3 + 3694 1 antisense novelGene_STX1A_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 11 NA FALSE 0 0 NA A coding 146 438 43 480 95 PB.1597.1 chr2 + 3611 16 incomplete-splice_match SETD2 rna8611 8289 20 4647 31 internal_fragment FALSE canonical 43 481 2523 301.609018433 2 1 0 FALSE 0 0 NA A coding 958 2874 104 2977 65 PB.5545.7 chr8 - 1643 1 genic_intron novelGene_2132 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 22 3 NA FALSE 0 0 NA A coding 132 396 382 777 85 PB.7100.3 chr11 + 2096 10 full-splice_match CPSF6 rna38543 3716 10 111 1509 multi-exon FALSE canonical 38 468 1476 488.716686844 11 0 0 FALSE 0 0 NA A coding 552 1656 8 1663 20 PB.3851.1 chr6 - 1703 6 full-splice_match C1QTNF3 rna21024 1962 6 250 9 multi-exon FALSE canonical 16 67 169 36.235341864 3 2 0 FALSE 0 0 NA C coding 246 738 86 823 40 PB.3851.2 chr6 - 1924 6 full-splice_match C1QTNF3 rna21022 2505 6 324 257 multi-exon FALSE canonical 12 36 390 47.7493455453 3 1 0 FALSE 0 0 NA C coding 319 957 88 1044 40 PB.1035.11 chr1 + 1377 1 genic_intron novelGene_2575 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 8 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 20 PB.10619.1 chr19 - 960 6 full-splice_match MYDGF rna57390 1065 6 93 12 multi-exon FALSE canonical 44 665 185 310.589761583 3 0 0 FALSE 0 0 NA A coding 173 519 12 530 45 PB.2908.1 chr4 + 2465 6 full-splice_match PIM1 rna15867 2724 6 255 4 multi-exon FALSE canonical 31 140 270 208.547356732 44 0 0 FALSE 0 0 NA C coding 313 939 189 1127 25 PB.2908.2 chr4 + 3435 1 novel_in_catalog PIM1 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA C non_coding NA NA NA NA 25 PB.2908.3 chr4 + 1568 2 incomplete-splice_match PIM1 rna15867 2724 6 1151 5 internal_fragment FALSE canonical 47 770 76 NA 5 1 0 FALSE 0 0 NA C non_coding NA NA NA NA 25 PB.9835.1 chr16 - 1410 11 full-splice_match SMARCE1 rna53297 2407 11 13 984 multi-exon FALSE canonical 40 725 70 403.373276259 29 0 0 FALSE 0 0 NA C coding 411 1233 116 1348 15 PB.9835.2 chr16 - 2060 10 novel_in_catalog SMARCE1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 40 725 55 422.406202606 2 2 0 FALSE 0 0 NA C coding 275 825 101 925 15 PB.3314.1 chr5 + 3302 15 novel_in_catalog WHSC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 39 196 851 197.324605663 2 0 0 FALSE 0 0 NA A coding 791 2373 56 2428 35 PB.11048.2 chr19 - 2846 9 novel_not_in_catalog SLC1A5 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 2775 97.2213968219 99 3 0 TRUE 0 0 NA C coding 542 1626 629 2254 35 PB.11048.3 chr19 - 2890 8 full-splice_match SLC1A5 rna59706 2977 8 130 -43 multi-exon FALSE canonical 28 144 1884 59.5902676618 27 1 0 FALSE 0 0 NA C coding 542 1626 629 2254 30 PB.11579.5 chr20 - 3799 22 full-splice_match FHOD1 rna62502 3847 22 40 8 multi-exon FALSE canonical 2 3 1225 170.757137479 8 1 0 FALSE 0 0 NA C coding 1164 3492 84 3575 25 PB.11579.4 chr20 - 3800 22 novel_not_in_catalog FHOD1 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 1248 171.029237267 3 5 0 TRUE 0 0 NA C coding 695 2085 1488 3572 15 PB.10331.3 chr17 + 3343 1 antisense novelGene_GPR18_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 12 NA FALSE 0 0 NA A non_coding NA NA NA NA 70 PB.11579.1 chr20 - 3754 22 novel_in_catalog FHOD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 11 20 1228 169.245383984 42 0 0 FALSE 0 0 NA C coding 1149 3447 87 3533 30 PB.10331.1 chr17 + 2141 9 full-splice_match UBAC2 rna55772 2334 9 119 74 multi-exon FALSE canonical 42 443 45 281.421392222 22 0 0 FALSE 0 0 NA A coding 345 1035 15 1049 15 PB.8544.2 chr14 - 2771 1 genic_intron novelGene_699 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.8544.1 chr14 - 3065 5 full-splice_match TRIM44 rna46288 2615 5 71 -521 multi-exon FALSE canonical 45 1305 1245 70.9929573972 11 0 0 FALSE 0 0 NA C coding 344 1032 239 1270 70 PB.12024.1 chrX + 2801 1 antisense novelGene_ACSL4_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.4966.1 chr7 + 3830 14 novel_in_catalog HIF1A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical 21 37 1845 731.760206625 3 0 0 FALSE 0 0 NA C coding 785 2355 310 2664 20 PB.10090.2 chr16 - 1743 5 incomplete-splice_match ACTG1 rna54570 1988 6 242 3 5prime_fragment FALSE canonical 48 3708 20 5237.90330189 3 1 0 FALSE 0 0 NA C coding 332 996 27 1022 15 PB.10090.3 chr16 - 1894 6 full-splice_match ACTG1 rna54570 1988 6 67 27 multi-exon FALSE canonical 48 3708 195 5091.53640859 773 15 0 FALSE 0 0 NA C coding 375 1125 73 1197 45 PB.10762.1 chr19 - 5711 23 full-splice_match ADGRL1 rna58109 8199 23 236 2252 multi-exon FALSE canonical 4 4 296 88.6622805933 2 19 0 FALSE 0 0 NA A coding 1469 4407 392 4798 70 PB.8066.13 chr13 + 1520 1 genic_intron novelGene_1401 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.747.9 chr1 + 2652 9 incomplete-splice_match IL6R rna4087 5948 10 662 2634 internal_fragment FALSE canonical 42 325 709 124.983998976 20 0 0 FALSE 0 0 NA C coding 277 831 334 1164 75 PB.8875.1 chr14 - 1912 9 full-splice_match DPAGT1 rna48221 1889 9 -5 -18 multi-exon FALSE canonical 34 202 489 41.9523539268 8 0 0 FALSE 0 0 NA A coding 408 1224 208 1431 15 PB.10114.3 chr16 - 2746 2 genic CD7 novel NA NA NA NA no_subcategory TRUE canonical 0 0 1638 NA 3 13 0 TRUE 0 0 NA C coding 102 306 819 1124 10 PB.9145.1 chr15 + 6649 1 intergenic novelGene_555 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 9 NA FALSE 0 0 NA A coding 112 336 4264 4599 80 PB.4014.1 chr6 + 1368 7 incomplete-splice_match VCAN rna21790 9665 14 388 7909 3prime_fragment FALSE canonical 33 210 166 259.615099715 21 2 0 FALSE 0 0 NA B coding 398 1194 173 1366 60 PB.4014.2 chr6 + 2711 3 novel_in_catalog VCAN novel NA NA NA NA combination_of_known_junctions FALSE canonical 33 210 305 108.49884792 28 0 0 FALSE 0 0 NA B coding 159 477 312 788 20 PB.4014.3 chr6 + 2076 2 novel_in_catalog VCAN novel NA NA NA NA combination_of_known_junctions FALSE canonical 33 210 247 NA 2 0 0 FALSE 0 0 NA B non_coding NA NA NA NA 90 PB.8849.3 chr14 + 5679 5 novel_not_in_catalog IL10RA novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 141 239.484863822 2 16 0 TRUE 0 0 NA B coding 366 1098 2744 3841 40 PB.9829.1 chr16 + 2825 12 full-splice_match CDC6 rna53280 3065 12 237 3 multi-exon FALSE canonical 12 32 221 60.3241245274 5 1 0 FALSE 0 0 NA A coding 559 1677 235 1911 15 PB.8849.1 chr14 + 3584 7 novel_not_in_catalog IL10RA novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 73 217.956417662 450 2 0 TRUE 0 0 NA B coding 431 1293 454 1746 40 PB.11208.1 chr19 - 1618 1 intergenic novelGene_1057 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 3 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 95 PB.1619.1 chr2 - 803 3 full-splice_match CLEC3B rna8688 931 3 118 10 multi-exon FALSE canonical 25 365 265 343 2 0 0 FALSE 0 0 NA A coding 202 606 58 663 25 PB.8849.4 chr14 + 6057 4 novel_not_in_catalog IL10RA novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 141 275.432387348 2 10 0 TRUE 0 0 NA B coding 118 354 2684 3037 85 PB.10106.1 chr16 + 1743 16 novel_not_in_catalog ASPSCR1 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 523 135.919093581 21 3 0 TRUE 0 0 NA B coding 548 1644 18 1661 15 PB.7746.1 chr12 + 1610 14 novel_in_catalog SP100 novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 1334 45 544.936693571 2 0 0 FALSE 0 0 NA B coding 446 1338 14 1351 30 PB.8849.9 chr14 + 1409 1 incomplete-splice_match IL10RA rna48105 5229 6 3813 8 mono-exon FALSE canonical NA NA NA NA 5 0 NA FALSE 0 0 NA B coding 113 339 304 642 40 PB.10080.1 chr16 - 1595 12 full-splice_match EIF4A3 rna54497 1497 12 -100 2 multi-exon FALSE canonical 48 1617 648 378.611938533 100 0 0 FALSE 0 0 NA A coding 405 1215 162 1376 30 PB.935.1 chr1 + 5602 1 genic_intron novelGene_2428 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 15 NA FALSE 0 0 NA A coding 122 366 5082 5447 30 PB.3948.2 chr6 + 1883 13 full-splice_match TRAPPC13 rna21490 1546 13 94 -431 multi-exon FALSE canonical 43 408 1065 227.778401083 5 0 0 FALSE 0 0 NA C coding 417 1251 68 1318 90 PB.2658.1 chr3 + 3343 1 genic_intron novelGene_2563 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 2 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.2279.1 chr3 + 2939 1 antisense novelGene_AVL9_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 6 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5079.3 chr7 - 7951 31 novel_not_in_catalog CCDC88C novel NA NA NA NA any annotated donor/acceptor FALSE canonical 16 33 4565 149.873279807 2 17 0 FALSE 0 0 NA B coding 1535 4605 125 4729 20 PB.8250.2 chr14 - 1692 11 novel_not_in_catalog SIGIRR novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 412 68.7459089692 8 11 0 TRUE 0 0 NA C coding 396 1188 334 1521 5 PB.11731.3 chr20 - 1318 5 novel_not_in_catalog RNF166 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 609 116.807534004 2 4 0 TRUE 0 0 NA B coding 197 591 67 657 70 PB.4324.1 chr6 + 1364 4 full-splice_match ATP6V0E1 rna23342 855 4 21 -530 multi-exon FALSE canonical 47 1510 158 422.784815243 11 0 0 FALSE 0 0 NA A non_coding NA NA NA NA 35 PB.8250.1 chr14 - 1624 10 full-splice_match SIGIRR rna44601 1979 10 352 3 multi-exon FALSE canonical 16 24 951 63.7965516309 25 0 0 FALSE 0 0 NA C coding 410 1230 224 1453 5 PB.5184.1 chr8 + 3377 8 full-splice_match AGPAT5 rna28164 5280 8 99 1804 multi-exon FALSE canonical 43 329 245 428.15534564 4 10 0 FALSE 0 0 NA A coding 364 1092 27 1118 15 PB.7050.1 chr11 + 1843 6 full-splice_match DTX3 rna38364 2439 6 575 21 multi-exon FALSE canonical 31 340 35 209.892829797 3 1 0 FALSE 0 0 NA C coding 340 1020 195 1214 50 PB.11571.4 chr20 + 2737 12 incomplete-splice_match LOC695543 rna62469 2154 14 183 -766 internal_fragment FALSE canonical 2 69 94 289.644609824 65 0 0 FALSE 0 0 NA A coding 559 1677 19 1695 35 PB.11571.3 chr20 + 2612 13 novel_not_in_catalog LOC697524 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 2007 941.403739105 2 2 0 TRUE 0 0 NA B coding 670 2010 407 2416 65 PB.11571.2 chr20 + 2919 13 novel_not_in_catalog LOC697524 novel NA NA NA NA any annotated donor/acceptor TRUE non_canonical 0 0 2846 902.493767291 2 1 0 TRUE 0 0 NA B coding 670 2010 621 2630 70 PB.11571.1 chr20 + 3296 11 novel_in_catalog LOC697524 novel NA NA NA NA combination_of_known_junctions FALSE canonical 21 325 950 786.05597765 2 4 0 FALSE 0 0 NA B coding 583 1749 623 2371 75 PB.6957.1 chr11 + 1855 4 full-splice_match DAZAP2 rna37865 2434 4 577 2 multi-exon FALSE canonical 48 3289 402 361.393137732 430 0 0 FALSE 0 0 NA C coding 168 504 25 528 25 PB.3340.2 chr5 + 1919 2 genic_intron novelGene_166 novel NA NA NA NA no_subcategory TRUE canonical 22 32 965 NA 2 3 0 FALSE 0 0 NA A non_coding NA NA NA NA 75 PB.7176.1 chr11 + 3615 4 full-splice_match TMPO rna38952 3632 4 34 -17 multi-exon FALSE canonical 41 351 813 1403.89600754 10 0 0 FALSE 0 0 NA A coding 695 2085 249 2333 15 PB.7050.3 chr11 + 1807 5 novel_not_in_catalog DTX3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 145 344.553334043 2 2 0 FALSE 0 0 NA C coding 340 1020 147 1166 25 PB.5765.1 chr9 + 2063 2 full-splice_match ZNF22 rna31280 2201 2 195 -57 multi-exon FALSE canonical 39 395 47 NA 25 0 0 FALSE 0 0 NA C coding 224 672 137 808 20 PB.9596.1 chr16 + 6287 2 full-splice_match SMCR8 rna52138 8490 2 167 2036 multi-exon FALSE canonical 36 153 2850 NA 6 4 0 FALSE 0 0 NA A coding 936 2808 494 3301 70 PB.4501.1 chr7 + 1635 6 novel_in_catalog DUT novel NA NA NA NA combination_of_known_junctions TRUE canonical 48 1064 956 1469.77209118 8 4 0 FALSE 0 0 NA A coding 164 492 802 1293 25 PB.7050.2 chr11 + 3101 4 novel_in_catalog DTX3 novel NA NA NA NA combination_of_known_junctions FALSE canonical 32 340 35 225.636876419 2 1 0 FALSE 0 0 NA C coding 271 813 195 1007 25 PB.2219.1 chr3 + 5880 15 incomplete-splice_match TNS3 rna11927 7322 28 1439 3 internal_fragment FALSE canonical 25 103 943 280.351565004 2 2 0 FALSE 0 0 NA A coding 964 2892 106 2997 25 PB.5765.2 chr9 + 2071 2 full-splice_match ZNF22 rna31281 2183 2 108 4 multi-exon FALSE canonical 32 105 55 NA 6 1 0 FALSE 0 0 NA C coding 224 672 145 816 20 PB.7023.2 chr11 - 4127 25 novel_not_in_catalog STAT2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 3648 563.227307577 2 6 0 TRUE 0 0 NA B coding 851 2553 57 2609 20 PB.7697.1 chr12 + 3510 20 full-splice_match VIL1 rna41606 4448 20 34 904 multi-exon FALSE canonical 4 206 401 95.4672718789 27 0 0 FALSE 0 0 NA A coding 827 2481 55 2535 45 PB.2147.1 chr3 - 1589 12 novel_not_in_catalog WIPI2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 846 541.463756867 3 4 0 TRUE 0 0 NA B coding 221 663 179 841 95 PB.4976.8 chr7 + 5818 16 novel_not_in_catalog PLEKHG3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 11 17 122 220.728339821 2 1 0 FALSE 0 0 NA B coding 724 2172 3009 5180 30 PB.5172.246 chr7 + 1540 8 fusion LOC708891_LOC722278 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 329 3335.83752602 2 9 0 TRUE 0 0 NA B coding 196 588 821 1408 15 PB.11072.1 chr19 + 1513 12 full-splice_match CYTH2 rna59818 1858 12 335 10 multi-exon FALSE canonical 31 94 164 207.446378614 19 1 0 FALSE 0 0 NA A coding 399 1197 146 1342 20 PB.1011.18 chr1 - 4523 31 full-splice_match PTPRC rna5563 4840 31 26 291 multi-exon FALSE canonical 33 1284 231 1396.76483346 6 4 0 FALSE 0 0 NA C coding 1196 3588 132 3719 50 PB.4976.7 chr7 + 6189 2 novel_not_in_catalog PLEKHG3 novel NA NA NA NA not any annotated donor/acceptor TRUE canonical 0 0 5302 NA 2 7 0 TRUE 0 0 NA B coding 190 570 2320 2889 75 PB.8841.1 chr14 - 1558 1 antisense novelGene_PAFAH1B2_AS novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A coding 110 330 527 856 90 PB.4976.1 chr7 + 5845 16 novel_not_in_catalog PLEKHG3 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 5 15 149 221.067862884 3 0 0 FALSE 0 0 NA B coding 724 2172 3036 5207 30 PB.4976.3 chr7 + 2489 1 intergenic novelGene_2153 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 80 PB.4976.2 chr7 + 5715 20 novel_not_in_catalog PLEKHG3 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 3 3 1011 292.102721658 2 2 0 TRUE 0 0 NA B coding 1310 3930 1145 5074 20 PB.2796.3 chr4 + 2762 9 novel_in_catalog BTN2A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 24 109 43 280.878977497 14 1 0 FALSE 0 0 NA C coding 355 1065 74 1138 15 PB.2796.2 chr4 + 2804 9 novel_in_catalog BTN2A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 31 368 80 208.588110879 5 2 0 FALSE 0 0 NA C coding 294 882 298 1179 15 PB.2796.1 chr4 + 2685 8 full-splice_match BTN2A2 rna14976 3490 8 28 777 multi-exon FALSE canonical 24 109 66 313.099025869 15 0 0 FALSE 0 0 NA C coding 519 1557 97 1653 15 PB.2796.7 chr4 + 2802 9 novel_in_catalog BTN2A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 24 109 68 302.796961676 2 6 0 FALSE 0 0 NA C coding 519 1557 99 1655 25 PB.2796.6 chr4 + 2751 9 novel_in_catalog BTN2A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 21 95 1072 264.95660022 2 3 0 FALSE 0 0 NA C coding 280 840 289 1128 15 PB.2796.5 chr4 + 2888 10 novel_in_catalog BTN2A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 24 109 66 274.983635877 5 3 0 FALSE 0 0 NA C coding 355 1065 97 1161 35 PB.2796.4 chr4 + 2758 9 novel_in_catalog BTN2A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 21 95 1077 315.531297972 5 1 0 FALSE 0 0 NA C coding 341 1023 111 1133 15 PB.816.1 chr1 + 1300 1 genic_intron novelGene_2235 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A coding 100 300 194 493 90 PB.2796.9 chr4 + 3485 1 novel_in_catalog BTN2A2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 10 NA FALSE 0 0 NA C coding 133 399 1033 1431 90 PB.2796.8 chr4 + 2668 8 full-splice_match BTN2A2 rna14975 3497 8 54 775 multi-exon FALSE canonical 28 224 1044 239.165214862 5 4 0 FALSE 0 0 NA C coding 458 1374 261 1634 15 PB.2751.1 chr4 - 5929 22 full-splice_match NUP153 rna14770 5655 22 -367 93 multi-exon FALSE canonical 43 352 652 341.234523459 4 3 0 FALSE 0 0 NA A coding 1474 4422 542 4963 55 PB.1010.1 chr1 + 3309 1 genic_intron novelGene_2516 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.2173.1 chr3 - 2872 1 full-splice_match DNAJC30 rna11619 1343 1 4 -1533 mono-exon FALSE canonical NA NA NA NA 13 1 NA FALSE 0 0 NA A coding 223 669 8 676 90 PB.8596.1 chr14 + 4203 1 novel_in_catalog USH1C novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 5 NA FALSE 0 0 NA B coding 110 330 3063 3392 70 PB.2751.2 chr4 - 1592 1 genic_intron novelGene_423 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A coding 116 348 460 807 80 PB.6463.1 chr10 - 5921 1 full-splice_match RTN4R rna35193 1695 1 -4230 4 mono-exon FALSE canonical NA NA NA NA 2 7 NA FALSE 0 0 NA A coding 245 735 4893 5627 10 PB.11919.1 chrX + 3609 2 intergenic novelGene_1214 novel NA NA NA NA no_subcategory FALSE canonical 32 1136 63 NA 6 1 0 FALSE 0 0 NA B coding 179 537 1779 2315 25 PB.9339.1 chr15 - 1425 9 full-splice_match RCL1 rna50765 1896 9 -25 496 multi-exon FALSE canonical 45 509 858 144.454144973 10 3 0 FALSE 0 0 NA A coding 373 1119 149 1267 15 PB.2050.1 chr3 - 5792 1 genic_intron novelGene_218 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 4 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.10639.2 chr19 - 2883 3 novel_not_in_catalog LOC697582 novel NA NA NA NA any annotated donor/acceptor TRUE canonical 0 0 2251 0 6 2 0 TRUE 0 0 NA C coding 372 1116 84 1199 85 PB.10639.1 chr19 - 2146 2 full-splice_match LOC697582 rna57455 1960 2 258 -444 multi-exon FALSE canonical 0 0 143 NA 11 1 0 FALSE 0 0 NA C coding 372 1116 156 1271 20 PB.1030.5 chr1 + 3718 15 novel_not_in_catalog IVNS1ABP novel NA NA NA NA any annotated donor/acceptor FALSE canonical 35 608 1194 1740.47694613 7 0 0 FALSE 0 0 NA C coding 302 906 2544 3449 30 PB.1030.4 chr1 + 3981 1 novel_in_catalog IVNS1ABP novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 2 13 NA FALSE 0 0 NA C coding 220 660 381 1040 75 PB.415.2 chr1 - 1604 10 novel_in_catalog YIPF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical 34 201 90 300.739089578 12 0 0 FALSE 0 0 NA C coding 306 918 140 1057 15 PB.415.3 chr1 - 1819 11 full-splice_match YIPF1 rna2204 1868 11 46 3 multi-exon FALSE canonical 38 216 71 288.832131177 5 1 0 FALSE 0 0 NA C coding 306 918 342 1259 15 PB.415.4 chr1 - 1692 10 novel_not_in_catalog YIPF1 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 1159 376.766505942 2 1 0 TRUE 0 0 NA C coding 295 885 340 1224 15 PB.415.5 chr1 - 1878 12 full-splice_match YIPF1 rna2205 1919 12 20 21 multi-exon FALSE canonical 38 215 1296 338.360754225 2 1 0 FALSE 0 0 NA C coding 306 918 368 1285 20 PB.1030.3 chr1 + 2864 8 novel_not_in_catalog IVNS1ABP novel NA NA NA NA any annotated donor/acceptor FALSE canonical 35 608 1223 1118.23074542 2 17 0 FALSE 0 0 NA C coding 221 663 567 1229 15 PB.1677.1 chr2 - 1995 5 full-splice_match LOC700215 rna8994 2034 5 30 9 multi-exon FALSE canonical 16 29 597 24.1867732449 27 0 0 FALSE 0 0 NA C coding 299 897 69 965 55 PB.469.1 chr1 - 4056 13 full-splice_match ANKRD13C rna2563 4140 13 77 7 multi-exon FALSE canonical 44 548 1713 137.186005117 8 3 0 FALSE 0 0 NA C coding 541 1623 320 1942 40 PB.1693.6 chr2 - 1876 15 incomplete-splice_match PSMD2 rna9046 3052 21 160 1016 internal_fragment FALSE canonical 46 1643 139 460.665822479 12 0 0 FALSE 0 0 NA B coding 624 1872 5 1876 60 PB.469.3 chr1 - 2922 1 novel_in_catalog ANKRD13C novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 3 5 NA FALSE 0 0 NA C coding 147 441 329 769 80 PB.6447.1 chr10 - 1704 10 incomplete-splice_match DGCR14 rna35120 3051 11 21 1326 internal_fragment FALSE canonical 28 95 840 53.9629502529 9 0 0 FALSE 0 0 NA A coding 476 1428 19 1446 5 PB.3977.2 chr6 + 2869 10 novel_in_catalog HEXB novel NA NA NA NA combination_of_known_junctions FALSE canonical 46 1952 365 576.531005237 10 1 0 FALSE 0 0 NA C coding 439 1317 67 1383 90 PB.7866.1 chr13 - 3164 1 genic_intron novelGene_475 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.9113.1 chr15 + 6931 1 full-splice_match LOC106993613 rna49483 1531 1 -5401 1 mono-exon FALSE canonical NA NA NA NA 3 3 NA FALSE 0 0 NA A coding 166 498 1003 1500 30 PB.6650.7 chr10 - 2523 1 genic_intron novelGene_1631 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA A coding 119 357 18 374 80 PB.6650.1 chr10 - 3050 6 full-splice_match NFAM1 rna36185 5639 6 17 2572 multi-exon FALSE canonical 21 60 501 22.045407685 114 0 0 FALSE 0 0 NA A coding 271 813 48 860 10 PB.1492.4 chr2 + 2915 1 genic_intron novelGene_1637 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 1 NA FALSE 0 0 NA A non_coding NA NA NA NA 65 PB.6336.1 chr10 + 1497 1 intergenic novelGene_756 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.10451.2 chr18 + 3594 1 genic_intron novelGene_761 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 3 NA FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.3128.1 chr4 - 5491 17 fusion PLEKHG1_LOC705354 novel NA NA NA NA no_subcategory FALSE canonical 0 0 94 216.173541397 2 4 0 TRUE 0 0 NA B coding 1354 4062 345 4406 85 PB.4013.1 chr6 + 1562 8 full-splice_match XRCC4 rna21787 1643 8 80 1 multi-exon FALSE canonical 42 351 38 96.6229786334 8 1 0 FALSE 0 0 NA A coding 334 1002 49 1050 20 PB.3128.3 chr4 - 4498 17 fusion PLEKHG1_LOC705354 novel NA NA NA NA no_subcategory FALSE canonical 11 86 84 204.095565851 7 4 0 TRUE 0 0 NA B coding 1354 4062 335 4396 40 PB.3128.2 chr4 - 5654 17 fusion PLEKHG1_LOC705354 novel NA NA NA NA no_subcategory FALSE canonical 10 22 257 212.95539439 2 2 0 TRUE 0 0 NA B coding 1354 4062 508 4569 85 PB.5005.1 chr7 + 4211 6 full-splice_match SUSD6 rna26983 5371 6 151 1009 multi-exon FALSE canonical 30 116 85 138.383525031 27 1 0 FALSE 0 0 NA C coding 303 909 166 1074 45 PB.12172.1 chrUn_NW_014818639v1 + 1615 2 intergenic novelGene_2 novel NA NA NA NA no_subcategory TRUE canonical 0 0 132 NA 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA 90 PB.5005.2 chr7 + 5531 5 novel_in_catalog SUSD6 novel NA NA NA NA combination_of_known_junctions FALSE canonical 30 116 111 148.243043682 2 8 0 FALSE 0 0 NA C coding 138 414 1688 2101 65 PB.6098.1 chr9 - 5459 1 genic_intron novelGene_2063 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 5 8 NA FALSE 0 0 NA A coding 175 525 3248 3772 75 PB.6171.1 chr10 + 3249 12 full-splice_match BCAS1 rna33735 2225 12 249 -1273 multi-exon FALSE canonical 3 7 84 144.187378088 9 2 0 FALSE 0 0 NA C coding 584 1752 90 1841 35 PB.10682.19 chr19 - 1181 1 intergenic novelGene_200 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 6 1 NA FALSE 0 0 NA A coding 114 342 628 969 75 PB.1693.3 chr2 - 2875 21 novel_not_in_catalog PSMD2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 699 746.053617376 2 8 0 TRUE 0 0 NA B coding 897 2691 26 2716 5 PB.11135.1 chr19 - 2909 1 genic ZNF350 novel NA NA NA NA mono-exon FALSE canonical NA NA NA NA 4 1 NA FALSE 0 0 NA B coding 120 360 1320 1679 80 PB.10585.1 chr19 + 3078 2 intergenic novelGene_88 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 19 NA 4 2 0 FALSE 0 0 NA B coding 107 321 1652 1972 60 PB.8090.1 chr13 + 1416 3 full-splice_match SPR rna43808 1383 3 1 -34 multi-exon FALSE canonical 30 225 313 317 32 0 0 FALSE 0 0 NA A coding 261 783 10 792 5 PB.11557.1 chr20 + 1501 9 full-splice_match SETD6 rna62404 2029 9 45 483 multi-exon FALSE canonical 1 1 58 175 3 0 0 FALSE 0 0 NA A coding 456 1368 32 1399 25 PB.10585.2 chr19 + 3108 3 intergenic novelGene_88 novel NA NA NA NA no_subcategory FALSE non_canonical 0 0 29 0 2 1 0 FALSE 0 0 NA B coding 107 321 1682 2002 60 PB.9422.1 chr15 + 3194 7 novel_not_in_catalog C15H9orf3 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 0 0 55 582.843032042 4 6 0 TRUE 0 0 NA A coding 128 384 59 442 15 PB.1685.1 chr2 - 1648 3 novel_not_in_catalog MAP3K13 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 31 241 195 16 16 1 0 FALSE 0 0 NA C non_coding NA NA NA NA 10 PB.1693.1 chr2 - 2913 21 novel_not_in_catalog PSMD2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 509 756.325987918 210 1 0 FALSE 0 0 NA B coding 713 2139 616 2754 5 PB.1951.1 chr2 + 2843 1 incomplete-splice_match LOC693481 rna10449 4873 4 2011 20 mono-exon FALSE canonical NA NA NA NA 13 0 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.12198.1 chrUn_NW_014974500v1 + 2882 1 intergenic novelGene_10 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA A coding 126 378 44 421 80 PB.1947.3 chr2 - 4253 7 novel_not_in_catalog ST6GAL1 novel NA NA NA NA any annotated donor/acceptor FALSE canonical 12 144 62 312.568392516 23 4 0 FALSE 0 0 NA B coding 406 1218 245 1462 10 PB.2652.4 chr3 - 5527 1 genic_intron novelGene_2561 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 12 NA FALSE 0 0 NA A coding 133 399 4858 5256 80 PB.4024.1 chr6 + 2624 1 intergenic novelGene_1644 novel NA NA NA NA no_subcategory FALSE canonical NA NA NA NA 2 19 NA FALSE 0 0 NA A non_coding NA NA NA NA 85 PB.7758.3 chr12 + 3342 7 full-splice_match EIF4E2 rna42027 3437 7 87 8 multi-exon FALSE canonical 41 434 689 509.94901706 11 2 0 FALSE 0 0 NA C coding 234 702 25 726 35 PB.1553.1 chr2 - 5328 3 full-splice_match DAG1 rna8384 5191 3 -79 -58 multi-exon FALSE canonical 23 107 124 341.499633968 4 8 0 FALSE 0 0 NA C coding 892 2676 247 2922 15 PB.6339.6 chr10 - 1565 5 full-splice_match FKBP1A rna34563 687 5 -55 -823 multi-exon FALSE canonical 44 313 135 435.307936983 364 2 0 FALSE 0 0 NA C coding 108 324 99 422 5 PB.6339.7 chr10 - 3618 4 novel_in_catalog FKBP1A novel NA NA NA NA combination_of_known_junctions FALSE canonical 44 313 134 375.635461585 4 2 0 FALSE 0 0 NA C coding 108 324 98 421 10 PB.6339.4 chr10 - 1423 9 novel_not_in_catalog SDCBP2 novel NA NA NA NA any annotated donor/acceptor FALSE non_canonical 0 0 49 35.4682957019 4 2 0 TRUE 0 0 NA C coding 292 876 76 951 50 PB.6339.5 chr10 - 2769 7 novel_in_catalog SDCBP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical 3 7 55 23.3666428911 2 4 0 FALSE 0 0 NA C coding 279 837 75 911 45 PB.6339.2 chr10 - 4157 1 novel_in_catalog SDCBP2 novel NA NA NA NA mono-exon_by_intron_retention/s FALSE canonical NA NA NA NA 4 2 NA FALSE 0 0 NA C coding 104 312 1942 2253 70 PB.6339.3 chr10 - 1500 8 novel_in_catalog SDCBP2 novel NA NA NA NA combination_of_known_junctions TRUE canonical 3 7 55 36.2491379208 2 4 0 FALSE 0 0 NA C coding 187 561 75 635 50 PB.6339.1 chr10 - 1421 9 full-splice_match SDCBP2 rna34559 2099 9 603 75 multi-exon FALSE canonical 3 7 55 34.1613817051 61 1 0 FALSE 0 0 NA C coding 292 876 75 950 45 PB.1962.1 chr2 - 3045 2 full-splice_match MB21D2 rna10488 3380 2 286 49 multi-exon FALSE canonical 28 185 252 NA 9 0 0 FALSE 0 0 NA A coding 489 1467 48 1514 65 PB.9190.