isoform chrom strand length exons structuralCategory associatedGene associatedTranscript refLength refExons diffToTSS diffToTTS subCategory RTS_stage AllCanonical Min_sample_cov MinCov MinCovPos sdCov FL nIndels nIndelsJunc bite isoExp geneExp ratioExp FSM_class coding ORFlength CDSlength CDSstart CDSend PB.8327.3 chr15 + 3822 2 genic_intron novelGene_917 novel NA NA NA NA no_subtype FALSE canonical NA NA 2280 None 3 33 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5395.2 chr9 + 1342 7 full-splice_match ANP32B ENST00000339399.4 1463 7 -9 130 no_subtype FALSE canonical NA NA 892 None 39 4 1 FALSE 0 0 NA A coding 251 753 205 957 PB.10565.1 chr21 + 2717 11 novel_not_in_catalog ETS2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1341 None 8 4 0 TRUE 0 0 NA A coding 469 1407 148 1554 PB.6592.2 chr11 - 2525 21 novel_not_in_catalog MRE11A novel NA NA NA NA no_subtype FALSE canonical NA NA 61 None 2 4 1 TRUE 0 0 NA B coding 708 2124 167 2290 PB.3189.2 chr5 - 2939 23 incomplete-splice_match MYO10 ENST00000513610.5 8038 41 -32 5131 internal_fragment FALSE canonical NA NA 508 None 14 2 0 FALSE 0 0 NA B coding 817 2451 488 2938 PB.7470.2 chr13 - 3707 16 full-splice_match LCP1 ENST00000323076.6 3787 16 78 2 no_subtype FALSE canonical NA NA 136 None 2221 5 0 FALSE 0 0 NA C coding 627 1881 161 2041 PB.2110.1 chr3 + 2751 11 full-splice_match ENTPD3 ENST00000301825.7 2819 11 65 3 no_subtype FALSE canonical NA NA 1406 None 4 8 1 FALSE 0 0 NA A coding 529 1587 54 1640 PB.3742.2 chr6 + 3097 3 genic_intron novelGene_98 novel NA NA NA NA no_subtype FALSE canonical NA NA 2905 None 10 50 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8351.8 chr16 + 3023 17 novel_not_in_catalog RHOT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2378 None 4 15 0 TRUE 0 0 NA B coding 323 969 69 1037 PB.8351.9 chr16 + 2868 19 novel_not_in_catalog RHOT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2218 None 2 13 0 TRUE 0 0 NA B coding 290 870 69 938 PB.6488.1 chr11 + 2013 11 novel_not_in_catalog ALDH3B1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1758 None 2 4 0 TRUE 0 0 NA A coding 387 1161 152 1312 PB.7752.1 chr14 + 3047 23 incomplete-splice_match SYNE2 ENST00000357395.7 21555 116 34 18474 3prime_fragment FALSE canonical NA NA 2959 None 19 2 0 FALSE 0 0 NA B coding 956 2868 179 3046 PB.8351.2 chr16 + 2492 20 novel_not_in_catalog RHOT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1802 None 5 7 1 TRUE 0 0 NA B coding 290 870 69 938 PB.8351.3 chr16 + 2852 19 novel_not_in_catalog RHOT2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2208 None 2 15 1 TRUE 0 0 NA B coding 285 855 91 945 PB.8351.1 chr16 + 2524 19 novel_not_in_catalog RHOT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1874 None 8 10 3 TRUE 0 0 NA B coding 269 807 440 1246 PB.8351.7 chr16 + 2948 18 novel_not_in_catalog RHOT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2305 None 2 17 1 TRUE 0 0 NA B coding 323 969 74 1042 PB.8351.4 chr16 + 3127 16 novel_not_in_catalog RHOT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2483 None 2 20 0 TRUE 0 0 NA B coding 196 588 555 1142 PB.8351.5 chr16 + 2555 20 novel_not_in_catalog RHOT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1916 None 2 15 3 TRUE 0 0 NA B coding 269 807 482 1288 PB.10650.1 chr22 + 5301 3 full-splice_match CRKL ENST00000354336.7 5325 3 20 4 no_subtype FALSE canonical NA NA 1266 None 8 21 0 FALSE 0 0 NA C coding 303 909 490 1398 PB.10650.2 chr22 + 3062 1 novel_in_catalog CRKL novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 9 18 0 FALSE 0 0 NA C coding 132 396 499 894 PB.10650.3 chr22 + 2789 1 incomplete-splice_match CRKL ENST00000354336.7 5325 3 2531 6 no_subtype FALSE canonical NA NA NA None 23 14 0 FALSE 0 0 NA C coding 127 381 1131 1511 PB.240.1 chr1 - 3256 6 novel_in_catalog TRIM62 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 65 None 2 10 0 FALSE 0 0 NA A coding 280 840 640 1479 PB.5555.1 chr9 - 2073 1 full-splice_match DOLK ENST00000372586.3 2090 1 14 3 no_subtype FALSE canonical NA NA NA None 4 1 0 FALSE 0 0 NA A coding 538 1614 303 1916 PB.1280.1 chr2 + 1376 7 full-splice_match QPCT ENST00000338415.7 1739 7 142 221 no_subtype FALSE canonical NA NA 956 None 39 0 0 FALSE 0 0 NA A coding 361 1083 17 1099 PB.4086.1 chr6 - 1744 1 antisense novelGene_RPF2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7836.1 chr14 - 3222 5 antisense novelGene_AHSA1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 103 None 2 26 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.7847.1 chr14 + 3543 17 full-splice_match ZC3H14 ENST00000251038.9 18281 17 119 14619 no_subtype FALSE canonical NA NA 2310 None 12 12 0 FALSE 0 0 NA C coding 736 2208 107 2314 PB.4689.1 chr7 - 2645 15 full-splice_match WDR91 ENST00000354475.4 4588 15 7 1936 no_subtype FALSE canonical NA NA 148 None 21 1 0 FALSE 0 0 NA A coding 747 2241 26 2266 PB.7847.2 chr14 + 3461 16 full-splice_match ZC3H14 ENST00000393514.9 2195 16 -106 -1160 no_subtype FALSE canonical NA NA 2235 None 6 12 0 FALSE 0 0 NA C coding 711 2133 107 2239 PB.2476.2 chr3 + 1430 1 incomplete-splice_match CDV3 ENST00000264993.7 3307 5 1875 3 no_subtype FALSE canonical NA NA NA None 129 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3680.1 chr5 + 1619 6 full-splice_match B4GALT7 ENST00000029410.9 1747 6 117 11 no_subtype FALSE canonical NA NA 822 None 20 7 0 FALSE 0 0 NA A coding 213 639 337 975 PB.2933.1 chr4 + 2796 11 novel_not_in_catalog ARHGAP24 novel NA NA NA NA no_subtype FALSE canonical NA NA 2058 None 2 5 0 TRUE 0 0 NA A coding 748 2244 56 2299 PB.7484.1 chr13 - 1376 1 novel_in_catalog LPAR6 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 10 1 0 FALSE 0 0 NA A coding 202 606 771 1376 PB.578.1 chr1 - 3257 5 full-splice_match SLC16A1 ENST00000369626.7 3910 5 136 517 no_subtype FALSE canonical NA NA 183 None 48 10 0 FALSE 0 0 NA A coding 500 1500 228 1727 PB.3372.2 chr5 + 3235 8 novel_not_in_catalog POLR3G novel NA NA NA NA no_subtype FALSE canonical NA NA 739 None 4 26 1 FALSE 0 0 NA A coding 223 669 155 823 PB.3372.3 chr5 + 1750 1 genic_intron novelGene_828 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2914.13 chr4 - 4137 27 novel_not_in_catalog SEC31A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 60 None 2 8 0 FALSE 0 0 NA C coding 1220 3660 65 3724 PB.5794.1 chr10 - 3698 20 novel_not_in_catalog ANK3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 660 None 2 23 2 TRUE 0 0 NA A coding 827 2481 645 3125 PB.8045.4 chr15 + 1619 1 novel_in_catalog PDIA3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10418.1 chr20 + 2671 17 novel_not_in_catalog PCIF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2179 None 110 3 1 FALSE 0 0 NA B coding 658 1974 293 2266 PB.8045.2 chr15 + 1261 10 incomplete-splice_match PDIA3 ENST00000300289.9 3727 13 46 2420 3prime_fragment FALSE canonical NA NA 1239 None 2 0 0 FALSE 0 0 NA C coding 386 1158 103 1260 PB.8045.3 chr15 - 2007 3 genic CATSPER2P1 novel NA NA NA NA no_subtype FALSE canonical NA NA 162 None 2 7 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.10418.4 chr20 + 3682 18 novel_not_in_catalog PCIF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3189 None 4 14 2 TRUE 0 0 NA B coding 550 1650 1769 3418 PB.8045.1 chr15 + 1819 13 full-splice_match PDIA3 ENST00000300289.9 3727 13 172 1736 no_subtype FALSE canonical NA NA 1380 None 303 2 0 FALSE 0 0 NA C coding 458 1374 118 1491 PB.3706.3 chr5 - 3025 2 full-splice_match TRIM52 ENST00000503005.1 370 2 -802 -1853 no_subtype FALSE canonical NA NA 1126 None 2 19 0 FALSE 0 0 NA C coding 272 816 314 1129 PB.5822.1 chr10 - 3060 7 novel_not_in_catalog LRRC20 novel NA NA NA NA no_subtype FALSE canonical NA NA 78 None 9 14 1 TRUE 0 0 NA A coding 184 552 142 693 PB.10446.1 chr20 - 5649 9 novel_not_in_catalog NFATC2 novel NA NA NA NA no_subtype TRUE canonical NA NA 86 None 2 32 2 TRUE 0 0 NA A coding 343 1029 113 1141 PB.2914.18 chr4 - 3783 25 novel_in_catalog SEC31A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 88 None 2 4 0 FALSE 0 0 NA C coding 1093 3279 93 3371 PB.2975.1 chr4 - 861 5 full-splice_match H2AFZ ENST00000296417.5 979 5 113 5 no_subtype FALSE canonical NA NA 108 None 8 0 0 FALSE 0 0 NA A coding 128 384 106 489 PB.6291.1 chr11 - 3152 10 novel_not_in_catalog TP53I11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 58 None 19 26 1 TRUE 0 0 NA B coding 189 567 167 733 PB.6291.2 chr11 - 3151 9 novel_not_in_catalog TP53I11 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 132 None 2 24 2 TRUE 0 0 NA B coding 189 567 164 730 PB.9157.1 chr17 - 3709 3 full-splice_match DUSP3 ENST00000226004.7 4110 3 41 360 no_subtype FALSE canonical NA NA 148 None 27 13 0 FALSE 0 0 NA A coding 185 555 24 578 PB.7470.1 chr13 - 1753 1 incomplete-splice_match LCP1 ENST00000323076.6 3787 16 2035 0 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5846.4 chr10 - 1704 12 novel_in_catalog ANXA7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 47 None 2 1 0 FALSE 0 0 NA C coding 291 873 519 1391 PB.10739.2 chr22 - 3444 12 novel_not_in_catalog IL2RB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 92 None 19 13 1 TRUE 0 0 NA B coding 551 1653 126 1778 PB.10739.3 chr22 - 3454 12 novel_not_in_catalog IL2RB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 92 None 7 13 1 TRUE 0 0 NA B coding 551 1653 126 1778 PB.1826.1 chr2 - 1660 4 full-splice_match METTL21A ENST00000406927.6 1103 4 64 -621 no_subtype FALSE canonical NA NA 50 None 4 11 0 FALSE 0 0 NA C coding 218 654 80 733 PB.5983.9 chr10 - 3475 16 full-splice_match MGEA5 ENST00000361464.7 5155 16 -24 1704 no_subtype FALSE canonical NA NA 619 None 5 3 0 FALSE 0 0 NA C coding 807 2421 748 3168 PB.5361.1 chr9 + 3694 2 intergenic novelGene_832 novel NA NA NA NA no_subtype TRUE canonical NA NA 2148 None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5569.4 chr9 + 6130 1 novel_in_catalog GPR107 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 39 0 FALSE 0 0 NA C coding 136 408 117 524 PB.678.11 chr1 - 3510 11 novel_in_catalog RFX5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 83 None 16 19 0 FALSE 0 0 NA C coding 616 1848 125 1972 PB.5569.2 chr9 + 1381 2 novel_not_in_catalog GPR107 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1270 None 3 8 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.5569.3 chr9 + 1763 3 novel_not_in_catalog GPR107 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 211 None 3 20 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.3706.2 chr5 - 3155 2 novel_not_in_catalog TRIM52 novel NA NA NA NA no_subtype FALSE canonical NA NA 1083 None 19 18 0 FALSE 0 0 NA C coding 277 831 271 1101 PB.5569.1 chr9 + 6722 18 full-splice_match GPR107 ENST00000347136.10 7209 18 481 6 no_subtype FALSE canonical NA NA 1588 None 4 35 0 FALSE 0 0 NA C coding 552 1656 27 1682 PB.1223.3 chr2 + 2908 5 novel_in_catalog RAB10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 394 None 5 3 0 FALSE 0 0 NA C coding 118 354 122 475 PB.9084.1 chr17 + 619 4 full-splice_match CISD3 ENST00000613478.1 2074 4 122 1333 no_subtype FALSE canonical NA NA 206 None 2 3 1 FALSE 0 0 NA A coding 127 381 3 383 PB.1223.1 chr2 + 3001 6 full-splice_match RAB10 ENST00000264710.4 3535 6 489 45 no_subtype FALSE canonical NA NA 529 None 275 3 0 FALSE 0 0 NA C coding 200 600 11 610 PB.8059.1 chr15 - 2339 9 full-splice_match GATM ENST00000396659.7 2597 9 253 5 no_subtype FALSE canonical NA NA 156 None 2 9 0 FALSE 0 0 NA A coding 423 1269 88 1356 PB.10283.2 chr20 - 3690 23 novel_not_in_catalog RRBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 879 None 2 8 3 FALSE 0 0 NA A coding 748 2244 945 3188 PB.1223.5 chr2 + 2575 2 novel_in_catalog RAB10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 104 None 2 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2969.3 chr4 - 1446 10 fusion ADH1B,ADH1A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 86 None 2 2 0 TRUE 0 0 NA A coding 375 1125 69 1193 PB.2969.2 chr4 - 1443 9 full-splice_match ADH1A ENST00000209668.2 1499 9 52 4 no_subtype FALSE canonical NA NA 80 None 9 9 0 FALSE 0 0 NA A coding 375 1125 63 1187 PB.2969.1 chr4 - 1450 10 fusion ADH1C,ADH1B,ADH1A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 87 None 48 2 0 TRUE 0 0 NA A coding 375 1125 70 1194 PB.7336.1 chr12 + 2490 6 full-splice_match BCL7A ENST00000261822.4 2581 6 67 24 no_subtype FALSE canonical NA NA 700 None 4 7 0 FALSE 0 0 NA A coding 210 630 140 769 PB.690.1 chr1 - 1615 14 full-splice_match ILF2 ENST00000361891.8 1659 14 36 8 no_subtype FALSE canonical NA NA 95 None 112 2 0 FALSE 0 0 NA A coding 390 1170 91 1260 PB.3925.1 chr6 - 2770 3 genic_intron novelGene_428 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1922 None 2 27 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.2969.4 chr4 - 1447 9 full-splice_match ADH1B ENST00000625860.2 4059 9 0 2612 no_subtype FALSE canonical NA NA 86 None 11 4 0 FALSE 0 0 NA A coding 375 1125 69 1193 PB.9051.1 chr17 + 3170 1 genic_intron novelGene_323 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 18 23 0 FALSE 0 0 NA A coding 34 102 313 414 PB.6882.1 chr12 - 1554 1 antisense novelGene_PPFIBP1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4647.1 chr7 + 2119 10 novel_not_in_catalog IRF5 novel NA NA NA NA no_subtype FALSE canonical NA NA 1312 None 2 12 1 FALSE 0 0 NA A coding 255 765 791 1555 PB.8628.1 chr16 + 6696 49 novel_not_in_catalog NLRC5 novel NA NA NA NA no_subtype TRUE canonical NA NA 5606 None 3 6 0 TRUE 0 0 NA B coding 1837 5511 205 5715 PB.7823.2 chr14 + 2856 3 full-splice_match FOS ENST00000555686.1 1496 3 -815 -545 no_subtype FALSE canonical NA NA 1409 None 2 4 0 FALSE 0 0 NA C coding 266 798 1251 2048 PB.7791.1 chr14 - 1326 8 full-splice_match MED6 ENST00000256379.9 1995 8 15 654 no_subtype FALSE canonical NA NA 37 None 3 3 0 FALSE 0 0 NA A coding 246 738 16 753 PB.4957.1 chr8 + 1661 1 genic_intron novelGene_629 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8492.1 chr16 + 2687 22 novel_not_in_catalog POLR3E novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2315 None 19 5 0 FALSE 0 0 NA B coding 708 2124 246 2369 PB.5238.3 chr9 - 2812 2 genic_intron novelGene_199 novel NA NA NA NA no_subtype FALSE canonical NA NA 2363 None 3 19 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5238.2 chr9 - 2766 11 full-splice_match MLLT3 ENST00000380338.8 6772 11 38 3968 no_subtype FALSE canonical NA NA 261 None 4 7 0 FALSE 0 0 NA C coding 568 1704 250 1953 PB.5238.1 chr9 - 1825 7 full-splice_match MLLT3 ENST00000380321.5 708 7 -2 -1115 no_subtype FALSE canonical NA NA 91 None 2 4 0 FALSE 0 0 NA C coding 162 486 185 670 PB.1053.1 chr1 + 2949 5 novel_not_in_catalog LYPLAL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1912 None 4 18 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.609.1 chr1 - 3120 14 full-splice_match GDAP2 ENST00000369443.9 8828 14 55 5653 no_subtype FALSE canonical NA NA 128 None 23 4 0 FALSE 0 0 NA C coding 497 1491 196 1686 PB.6690.1 chr11 - 2713 18 novel_not_in_catalog MCAM novel NA NA NA NA no_subtype FALSE canonical NA NA 99 None 4 13 2 TRUE 0 0 NA C coding 646 1938 33 1970 PB.6690.2 chr11 - 3321 16 full-splice_match MCAM ENST00000264036.5 3313 16 -14 6 no_subtype FALSE canonical NA NA 96 None 4 11 0 FALSE 0 0 NA C coding 646 1938 30 1967 PB.448.1 chr1 - 1549 1 full-splice_match RP11-486G15.2 ENST00000605506.1 1601 1 41 11 no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8402.1 chr16 + 3155 10 novel_not_in_catalog NAA60 novel NA NA NA NA no_subtype TRUE canonical NA NA 3084 None 2 15 1 TRUE 0 0 NA B coding 242 726 150 875 PB.7217.1 chr12 + 1757 4 novel_not_in_catalog TMEM263 novel NA NA NA NA no_subtype TRUE canonical NA NA 213 None 24 6 0 TRUE 0 0 NA A coding 116 348 150 497 PB.8402.2 chr16 + 1653 1 novel_in_catalog NAA60 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.11017.6 chrX - 1396 9 novel_not_in_catalog IL2RG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 155 None 4 0 0 TRUE 0 0 NA B coding 345 1035 41 1075 PB.8333.1 chr15 - 2675 2 genic SNRPA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 130 None 16 15 0 TRUE 0 0 NA C coding 23 69 276 344 PB.10422.1 chr20 + 1370 10 novel_not_in_catalog CD40 novel NA NA NA NA no_subtype FALSE canonical NA NA 741 None 18 3 0 TRUE 0 0 NA A coding 277 831 67 897 PB.4992.1 chr8 + 2422 4 genic_intron novelGene_753 novel NA NA NA NA no_subtype FALSE canonical NA NA 401 None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4534.1 chr7 - 2131 3 full-splice_match ZNF394 ENST00000337673.6 2179 3 11 37 no_subtype FALSE canonical NA NA 649 None 5 7 1 FALSE 0 0 NA A coding 561 1683 194 1876 PB.2567.1 chr3 + 1594 9 full-splice_match SERPINI1 ENST00000446050.6 1890 9 293 3 no_subtype FALSE canonical NA NA 1275 None 9 2 0 FALSE 0 0 NA A coding 410 1230 120 1349 PB.6038.1 chr10 + 1721 3 antisense novelGene_ABLIM1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 42 None 4 5 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6038.2 chr10 + 1032 2 antisense novelGene_ABLIM1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 21 None 3 5 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.8426.3 chr16 + 2243 10 novel_not_in_catalog PMM2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1561 None 2 17 1 TRUE 0 0 NA B coding 219 657 233 889 PB.8934.2 chr17 - 2924 24 novel_not_in_catalog ELAC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 286 None 2 7 1 FALSE 0 0 NA C coding 565 1695 803 2497 PB.8426.1 chr16 + 2162 9 novel_not_in_catalog PMM2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1480 None 6 15 1 TRUE 0 0 NA B coding 246 738 71 808 PB.9961.1 chr19 - 1518 2 genic ZNF585B novel NA NA NA NA no_subtype FALSE canonical NA NA 1241 None 2 15 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.5058.1 chr8 + 1476 11 full-splice_match DCAF13 ENST00000612750.4 1967 11 -5 496 no_subtype FALSE canonical NA NA 1313 None 29 0 0 FALSE 0 0 NA A coding 445 1335 64 1398 PB.4935.1 chr8 + 1490 5 novel_not_in_catalog CHCHD7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1007 None 8 7 1 TRUE 0 0 NA A coding 85 255 62 316 PB.2895.1 chr4 + 2755 2 genic_intron novelGene_725 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2475 None 2 16 0 FALSE 0 0 NA A coding 119 357 1119 1475 PB.11017.3 chrX - 1480 9 novel_not_in_catalog IL2RG novel NA NA NA NA no_subtype FALSE canonical NA NA 28 None 15 1 0 TRUE 0 0 NA B coding 369 1107 48 1154 PB.10967.1 chrX - 1418 11 full-splice_match WDR45 ENST00000376368.7 1381 11 24 -61 no_subtype FALSE canonical NA NA 155 None 24 1 0 FALSE 0 0 NA A coding 361 1083 173 1255 PB.9941.1 chr19 + 2595 22 novel_not_in_catalog HAUS5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2438 None 3 7 1 TRUE 0 0 NA A coding 616 1848 100 1947 PB.9941.2 chr19 + 1586 10 full-splice_match RBM42 ENST00000262633.8 1680 10 91 3 no_subtype FALSE canonical NA NA 1344 None 86 1 1 FALSE 0 0 NA C coding 480 1440 15 1454 PB.9941.3 chr19 + 1567 10 novel_not_in_catalog RBM42 novel NA NA NA NA no_subtype FALSE canonical NA NA 1326 None 76 2 1 FALSE 0 0 NA C coding 451 1353 84 1436 PB.9941.4 chr19 + 1587 9 novel_not_in_catalog RBM42 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1346 None 3 1 0 TRUE 0 0 NA C coding 456 1368 89 1456 PB.7207.5 chr12 - 2753 2 genic_intron novelGene_950 novel NA NA NA NA no_subtype FALSE canonical NA NA 278 None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7847.5 chr14 + 1822 1 genic_intron novelGene_799 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5689.2 chr10 - 2680 15 novel_not_in_catalog DCLRE1C novel NA NA NA NA no_subtype FALSE canonical NA NA 186 None 8 8 1 TRUE 0 0 NA B coding 692 2076 78 2153 PB.5689.1 chr10 - 3185 16 novel_not_in_catalog DCLRE1C novel NA NA NA NA no_subtype FALSE canonical NA NA 192 None 10 4 1 TRUE 0 0 NA B coding 725 2175 84 2258 PB.266.41 chr1 - 3343 19 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 12 5 1 TRUE 0 0 NA C coding 836 2508 570 3077 PB.8756.1 chr16 + 3757 10 novel_not_in_catalog VAT1L novel NA NA NA NA no_subtype FALSE canonical NA NA 1258 None 2 22 0 TRUE 0 0 NA A coding 419 1257 98 1354 PB.7851.2 chr14 - 2997 10 novel_not_in_catalog FOXN3 novel NA NA NA NA no_subtype FALSE canonical NA NA 143 None 15 13 0 FALSE 0 0 NA B coding 487 1461 273 1733 PB.7851.3 chr14 - 2984 9 novel_not_in_catalog FOXN3 novel NA NA NA NA no_subtype FALSE canonical NA NA 133 None 2 17 1 FALSE 0 0 NA B coding 487 1461 263 1723 PB.10336.1 chr20 + 646 4 full-splice_match DYNLRB1 ENST00000357156.6 675 4 15 14 no_subtype FALSE canonical NA NA 282 None 2 5 0 FALSE 0 0 NA C coding 96 288 36 323 PB.10302.1 chr20 + 878 5 novel_not_in_catalog CST7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 592 None 2 2 0 TRUE 0 0 NA A coding 167 501 167 667 PB.7851.8 chr14 - 2939 1 genic_intron novelGene_816 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.663.12 chr1 - 1628 2 novel_not_in_catalog CTSS novel NA NA NA NA no_subtype FALSE canonical NA NA 679 None 2 10 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.9926.1 chr19 + 2604 17 full-splice_match UBA2 ENST00000246548.8 4023 17 56 1363 no_subtype FALSE canonical NA NA 1755 None 66 0 0 FALSE 0 0 NA C coding 640 1920 15 1934 PB.9926.2 chr19 + 2644 1 novel_in_catalog UBA2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA C coding 128 384 40 423 PB.4693.1 chr7 + 1018 3 full-splice_match C7orf73 ENST00000507606.2 2450 3 -7 1439 no_subtype FALSE canonical NA NA 135 None 6 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7550.1 chr13 + 3916 16 novel_not_in_catalog FARP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2501 None 2 12 1 TRUE 0 0 NA A coding 829 2487 100 2586 PB.5870.1 chr10 - 6753 3 genic_intron novelGene_737 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2809 None 3 37 1 FALSE 0 0 NA A coding 135 405 3963 4367 PB.742.4 chr1 + 2929 14 novel_not_in_catalog SEMA4A novel NA NA NA NA no_subtype FALSE canonical NA NA 1600 None 2 8 0 TRUE 0 0 NA C coding 592 1776 415 2190 PB.678.15 chr1 - 6614 19 full-splice_match POGZ ENST00000271715.6 6626 19 4 8 no_subtype FALSE canonical NA NA 310 None 2 17 0 FALSE 0 0 NA C coding 1410 4230 312 4541 PB.8843.1 chr17 - 2670 3 genic_intron novelGene_24 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 144 None 2 14 1 FALSE 0 0 NA A coding 104 312 55 366 PB.2643.1 chr3 - 1288 2 genic_intron novelGene_1348 novel NA NA NA NA no_subtype TRUE canonical NA NA 840 None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.792.1 chr1 + 5826 5 genic_intron novelGene_1278 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5807 None 2 37 3 FALSE 0 0 NA A coding 162 486 3772 4257 PB.6573.2 chr11 - 3832 19 novel_not_in_catalog SYTL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 164 None 4 6 1 FALSE 0 0 NA A coding 573 1719 554 2272 PB.8478.4 chr16 + 1076 3 novel_in_catalog C16orf62 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 331 None 2 7 0 FALSE 0 0 NA C coding 96 288 140 427 PB.3712.1 chr6 - 1360 7 novel_not_in_catalog SERPINB6 novel NA NA NA NA no_subtype FALSE canonical NA NA 97 None 7 4 1 FALSE 0 0 NA A coding 193 579 108 686 PB.8478.1 chr16 + 3108 31 full-splice_match C16orf62 ENST00000417362.6 3115 31 0 7 no_subtype FALSE canonical NA NA 2803 None 25 0 0 FALSE 0 0 NA C coding 963 2889 11 2899 PB.9902.2 chr19 - 2733 1 full-splice_match TSSK6 ENST00000585580.3 1467 1 -444 -822 no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A coding 273 819 703 1521 PB.10053.1 chr19 + 2900 13 full-splice_match PPP1R37 ENST00000221462.8 3163 13 248 15 no_subtype FALSE canonical NA NA 2200 None 20 7 0 FALSE 0 0 NA A coding 691 2073 117 2189 PB.856.7 chr1 - 1181 7 full-splice_match SELL ENST00000463108.5 1346 7 89 76 no_subtype FALSE canonical NA NA 114 None 3 1 0 FALSE 0 0 NA C coding 369 1107 73 1179 PB.8418.1 chr16 + 5659 23 fusion MGRN1,NUDT16L1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5322 None 2 33 3 TRUE 0 0 NA A coding 576 1728 136 1863 PB.8418.2 chr16 + 1303 4 novel_not_in_catalog NUDT16L1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 963 None 4 6 1 TRUE 0 0 NA B coding 211 633 28 660 PB.8418.3 chr16 + 1342 5 novel_not_in_catalog NUDT16L1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 994 None 4 8 2 TRUE 0 0 NA B coding 192 576 10 585 PB.6801.4 chr12 - 3320 2 full-splice_match C1RL ENST00000539927.1 354 2 -110 -2856 no_subtype FALSE canonical NA NA 129 None 2 17 0 FALSE 0 0 NA C coding 138 414 59 472 PB.856.2 chr1 - 3010 9 novel_not_in_catalog SELL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 118 None 2 7 0 TRUE 0 0 NA C coding 332 996 77 1072 PB.856.1 chr1 - 1503 9 full-splice_match SELL ENST00000236147.4 2436 9 84 849 no_subtype FALSE canonical NA NA 119 None 543 1 0 FALSE 0 0 NA C coding 385 1155 78 1232 PB.7847.4 chr14 + 3055 15 full-splice_match ZC3H14 ENST00000556945.5 2075 15 44 -1024 no_subtype FALSE canonical NA NA 1891 None 9 10 0 FALSE 0 0 NA C coding 605 1815 81 1895 PB.8265.2 chr15 - 2851 3 genic RP11-182J1.3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 328 None 2 6 1 FALSE 0 0 NA A coding 149 447 1554 2000 PB.7551.4 chr13 - 1848 1 incomplete-splice_match STK24 ENST00000418038.5 2172 4 322 3 no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8265.1 chr15 + 3445 4 novel_not_in_catalog ZSCAN2 novel NA NA NA NA no_subtype TRUE canonical NA NA 3128 None 7 5 0 TRUE 0 0 NA A coding 613 1839 243 2081 PB.8583.1 chr16 + 2783 5 full-splice_match ZNF720 ENST00000529515.1 518 5 -53 -2212 no_subtype FALSE canonical NA NA 541 None 2 5 0 FALSE 0 0 NA A coding 541 1623 181 1803 PB.788.4 chr1 + 1646 8 novel_in_catalog NCSTN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 845 None 2 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2468.1 chr3 + 3656 29 full-splice_match IFT122 ENST00000347300.6 3841 29 180 5 no_subtype FALSE canonical NA NA 3485 None 18 0 0 FALSE 0 0 NA A coding 1182 3546 27 3572 PB.7008.7 chr12 + 966 2 full-splice_match HNRNPA1 ENST00000551665.1 925 2 -11 -30 no_subtype FALSE canonical NA NA 837 None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1247.9 chr2 + 2573 1 incomplete-splice_match FOSL2 ENST00000379619.5 5829 4 3253 4 no_subtype FALSE canonical NA NA NA None 6 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5171.1 chr8 - 2316 16 full-splice_match BOP1 ENST00000569669.5 2303 16 -16 3 no_subtype FALSE canonical NA NA 115 None 4 1 0 FALSE 0 0 NA A coding 746 2238 17 2254 PB.7008.4 chr12 + 1513 11 full-splice_match HNRNPA1 ENST00000340913.10 1842 11 -7 336 no_subtype FALSE canonical NA NA 1183 None 15 2 0 FALSE 0 0 NA C coding 372 1116 61 1176 PB.4651.2 chr7 + 4463 18 novel_not_in_catalog AHCYL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1791 None 4 18 0 TRUE 0 0 NA B coding 508 1524 272 1795 PB.6211.1 chr11 + 2569 19 novel_in_catalog ARNTL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2018 None 16 5 1 FALSE 0 0 NA A coding 625 1875 302 2176 PB.2694.1 chr3 - 1556 7 full-splice_match BDH1 ENST00000392378.6 3455 7 86 1813 no_subtype FALSE canonical NA NA 182 None 26 1 0 FALSE 0 0 NA A coding 343 1029 226 1254 PB.1247.3 chr2 + 5961 4 novel_not_in_catalog FOSL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 575 None 2 35 0 FALSE 0 0 NA C coding 287 861 231 1091 PB.1247.2 chr2 + 2984 3 novel_in_catalog FOSL2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 599 None 3 7 0 FALSE 0 0 NA C coding 159 477 246 722 PB.1247.5 chr2 + 7090 3 novel_not_in_catalog FOSL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2879 None 2 40 2 TRUE 0 0 NA C coding 108 324 82 405 PB.1247.4 chr2 + 5179 4 full-splice_match FOSL2 ENST00000436647.1 889 4 207 -4497 no_subtype FALSE canonical NA NA 419 None 13 27 0 FALSE 0 0 NA C coding 287 861 75 935 PB.3391.1 chr5 + 4370 18 full-splice_match LNPEP ENST00000231368.9 12752 18 641 7741 no_subtype TRUE canonical NA NA 2997 None 10 4 0 FALSE 0 0 NA A coding 1025 3075 52 3126 PB.483.1 chr1 + 1853 1 genic_intron novelGene_847 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5361.7 chr9 + 1852 9 novel_in_catalog SYK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1124 None 6 5 0 FALSE 0 0 NA C coding 394 1182 122 1303 PB.674.1 chr1 - 1940 3 full-splice_match LYSMD1 ENST00000368908.9 2479 3 535 4 no_subtype FALSE canonical NA NA 306 None 2 6 0 FALSE 0 0 NA A coding 227 681 127 807 PB.5143.1 chr8 - 2902 1 incomplete-splice_match SLC45A4 ENST00000519067.5 7483 7 4566 16 no_subtype FALSE canonical NA NA NA None 3 21 0 FALSE 0 0 NA A coding 120 360 536 895 PB.7012.3 chr12 - 4176 30 full-splice_match ITGA5 ENST00000293379.8 4444 30 240 28 no_subtype FALSE canonical NA NA 240 None 243 3 0 FALSE 0 0 NA C coding 1049 3147 23 3169 PB.3627.5 chr5 - 5569 5 novel_not_in_catalog CCNJL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 124 None 2 37 0 TRUE 0 0 NA B coding 99 297 5018 5314 PB.7012.6 chr12 - 3804 28 incomplete-splice_match ITGA5 ENST00000293379.8 4444 30 619 21 5prime_fragment FALSE canonical NA NA 105 None 8 4 0 FALSE 0 0 NA C coding 728 2184 607 2790 PB.2979.1 chr4 + 3301 19 novel_not_in_catalog BANK1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3057 None 3 6 1 TRUE 0 0 NA B coding 785 2355 225 2579 PB.8909.1 chr17 + 1746 11 full-splice_match WRAP53 ENST00000396463.6 1905 11 156 3 no_subtype FALSE canonical NA NA 1489 None 2 1 0 FALSE 0 0 NA A coding 548 1644 87 1730 PB.9954.1 chr19 - 2622 5 novel_not_in_catalog ZFP82 novel NA NA NA NA no_subtype FALSE canonical NA NA 176 None 7 4 1 FALSE 0 0 NA A coding 532 1596 255 1850 PB.7956.1 chr14 + 3229 24 novel_not_in_catalog PACS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2592 None 2 10 2 FALSE 0 0 NA A coding 324 972 38 1009 PB.654.1 chr1 + 2697 18 full-splice_match TARS2 ENST00000369064.7 2729 18 22 10 no_subtype FALSE canonical NA NA 2020 None 34 4 0 FALSE 0 0 NA A coding 718 2154 13 2166 PB.3776.1 chr6 + 3258 18 novel_not_in_catalog CDKAL1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1711 None 10 13 0 TRUE 0 0 NA A coding 579 1737 164 1900 PB.957.1 chr1 + 3527 24 full-splice_match IPO9 ENST00000361565.8 11435 24 57 7851 no_subtype FALSE canonical NA NA 3027 None 46 0 0 FALSE 0 0 NA A coding 1041 3123 13 3135 PB.1800.2 chr2 - 3750 16 novel_in_catalog TRAK2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 91 None 12 1 0 FALSE 0 0 NA C coding 914 2742 291 3032 PB.10842.3 chr22 - 3165 20 novel_not_in_catalog SBF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 88 None 2 2 1 TRUE 0 0 NA B coding 358 1074 70 1143 PB.10842.1 chr22 - 5438 21 novel_not_in_catalog SBF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 182 None 2 45 3 TRUE 0 0 NA B coding 622 1866 842 2707 PB.1917.2 chr2 + 1641 6 novel_not_in_catalog PTMA novel NA NA NA NA no_subtype FALSE canonical NA NA 910 None 7 16 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.4486.1 chr7 - 3067 18 novel_not_in_catalog SEMA3A novel NA NA NA NA no_subtype FALSE canonical NA NA 342 None 5 2 1 TRUE 0 0 NA A coding 771 2313 231 2543 PB.10842.6 chr22 - 5847 40 novel_not_in_catalog SBF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 139 None 2 6 1 TRUE 0 0 NA B coding 1557 4671 869 5539 PB.10842.5 chr22 - 3386 22 novel_not_in_catalog SBF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 44 None 2 0 0 TRUE 0 0 NA B coding 1014 3042 35 3076 PB.10842.4 chr22 - 5541 23 novel_not_in_catalog SBF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 47 None 2 55 5 TRUE 0 0 NA B coding 552 1656 49 1704 PB.8211.5 chr15 + 2807 2 incomplete-splice_match C15orf39 ENST00000394987.4 4430 3 1619 4 internal_fragment FALSE canonical NA NA 1390 None 14 10 0 FALSE 0 0 NA C coding 548 1644 112 1755 PB.8211.4 chr15 + 4473 3 novel_in_catalog C15orf39 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3056 None 8 17 0 FALSE 0 0 NA C coding 938 2814 229 3042 PB.8211.3 chr15 + 4387 3 full-splice_match C15orf39 ENST00000394987.4 4430 3 38 5 no_subtype FALSE canonical NA NA 2971 None 29 13 0 FALSE 0 0 NA C coding 1047 3141 196 3336 PB.8211.2 chr15 + 3692 2 novel_in_catalog C15orf39 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 171 None 15 8 0 FALSE 0 0 NA C coding 938 2814 222 3035 PB.8211.1 chr15 + 3585 3 novel_not_in_catalog C15orf39 novel NA NA NA NA no_subtype FALSE canonical NA NA 3027 None 2 8 1 FALSE 0 0 NA C coding 953 2859 241 3099 PB.6306.1 chr11 + 1475 4 full-splice_match C11orf49 ENST00000532840.5 719 4 19 -775 no_subtype FALSE canonical NA NA 307 None 2 3 0 FALSE 0 0 NA A coding 148 444 28 471 PB.1465.1 chr2 + 2807 1 incomplete-splice_match RMND5A ENST00000283632.4 6301 9 3492 3 no_subtype FALSE canonical NA NA NA None 4 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5926.1 chr10 - 3474 1 antisense novelGene_FFAR4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 26 0 FALSE 0 0 NA A coding 150 450 2239 2688 PB.2365.1 chr3 + 3842 17 novel_not_in_catalog CD96 novel NA NA NA NA no_subtype FALSE canonical NA NA 3541 None 2 10 0 TRUE 0 0 NA B coding 569 1707 37 1743 PB.2227.1 chr3 - 1680 4 full-splice_match ABHD14B ENST00000361143.9 1636 4 -13 -31 no_subtype FALSE canonical NA NA 115 None 63 12 0 FALSE 0 0 NA A coding 210 630 144 773 PB.2365.3 chr3 + 3241 18 novel_not_in_catalog CD96 novel NA NA NA NA no_subtype FALSE canonical NA NA 2968 None 2 7 0 TRUE 0 0 NA B coding 569 1707 12 1718 PB.7256.2 chr12 - 1519 8 full-splice_match PPP1CC ENST00000340766.9 1472 8 48 -95 no_subtype FALSE canonical NA NA 239 None 4 2 0 FALSE 0 0 NA C coding 337 1011 185 1195 PB.341.1 chr1 + 1554 14 full-splice_match NASP ENST00000351223.7 1538 14 -20 4 no_subtype FALSE canonical NA NA 1371 None 17 1 0 FALSE 0 0 NA C coding 449 1347 103 1449 PB.341.2 chr1 + 2075 13 novel_in_catalog NASP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1242 None 5 7 0 FALSE 0 0 NA C coding 406 1218 103 1320 PB.4455.1 chr7 + 1681 1 full-splice_match CLDN4 ENST00000340958.3 1831 1 135 15 no_subtype FALSE canonical NA NA NA None 260 4 0 FALSE 0 0 NA A coding 206 618 214 831 PB.6104.1 chr11 + 526 2 full-splice_match IFITM1 ENST00000408968.3 855 2 327 2 no_subtype FALSE canonical NA NA 177 None 5 1 0 FALSE 0 0 NA A coding 58 174 193 366 PB.2224.1 chr3 + 1366 7 novel_not_in_catalog TEX264 novel NA NA NA NA no_subtype FALSE canonical NA NA 778 None 11 0 0 TRUE 0 0 NA A coding 313 939 127 1065 PB.3669.2 chr5 - 1533 7 full-splice_match RAB24 ENST00000478234.5 1820 7 25 262 no_subtype FALSE canonical NA NA 537 None 38 5 0 FALSE 0 0 NA C coding 184 552 421 972 PB.2883.2 chr4 - 3081 22 full-splice_match SDAD1 ENST00000395710.5 3080 22 -16 15 no_subtype TRUE canonical NA NA 203 None 8 7 0 FALSE 0 0 NA C coding 590 1770 480 2249 PB.10121.3 chr19 - 2498 2 full-splice_match NUP62 ENST00000422090.2 3479 2 240 741 no_subtype FALSE canonical NA NA 179 None 8 14 0 FALSE 0 0 NA C coding 522 1566 257 1822 PB.2883.1 chr4 - 3004 22 full-splice_match SDAD1 ENST00000356260.9 3017 22 6 7 no_subtype FALSE canonical NA NA 203 None 18 7 0 FALSE 0 0 NA C coding 687 2061 114 2174 PB.2551.6 chr3 - 4013 11 novel_in_catalog CCNL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 352 None 2 14 0 FALSE 0 0 NA C coding 299 897 2674 3570 PB.2551.7 chr3 - 2817 8 novel_in_catalog CCNL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 356 None 7 6 0 FALSE 0 0 NA C coding 172 516 54 569 PB.2551.4 chr3 - 3623 11 novel_in_catalog CCNL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 356 None 3 6 0 FALSE 0 0 NA C coding 299 897 2284 3180 PB.10121.2 chr19 - 3120 4 novel_not_in_catalog NUP62 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 111 None 3 25 2 TRUE 0 0 NA C coding 522 1566 189 1754 PB.3637.2 chr5 - 635 2 genic_intron novelGene_1298 novel NA NA NA NA no_subtype FALSE canonical NA NA 158 None 3 6 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8065.1 chr15 - 2899 16 full-splice_match MYEF2 ENST00000267836.10 2958 16 57 2 no_subtype FALSE canonical NA NA 220 None 2 11 0 FALSE 0 0 NA A coding 576 1728 60 1787 PB.2551.8 chr3 - 2892 8 novel_in_catalog CCNL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 356 None 4 11 1 FALSE 0 0 NA C coding 172 516 54 569 PB.1496.2 chr2 - 2644 11 incomplete-splice_match TMEM131 ENST00000186436.9 6640 41 3994 2 5prime_fragment FALSE canonical NA NA 379 None 3 7 0 FALSE 0 0 NA B coding 530 1590 295 1884 PB.373.3 chr1 + 3016 5 novel_not_in_catalog SCP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2014 None 4 13 0 FALSE 0 0 NA C coding 121 363 85 447 PB.10121.1 chr19 - 3132 3 novel_not_in_catalog NUP62 novel NA NA NA NA no_subtype FALSE canonical NA NA 113 None 48 23 1 TRUE 0 0 NA C coding 522 1566 191 1756 PB.373.1 chr1 + 2622 16 full-splice_match SCP2 ENST00000371514.7 2811 16 103 86 no_subtype FALSE canonical NA NA 1613 None 63 6 0 FALSE 0 0 NA C coding 547 1641 66 1706 PB.6563.1 chr11 - 2456 14 full-splice_match NARS2 ENST00000281038.9 2519 14 48 15 no_subtype FALSE canonical NA NA 469 None 2 19 1 FALSE 0 0 NA A coding 477 1431 329 1759 PB.4023.4 chr6 + 2656 10 novel_not_in_catalog ZNF292 novel NA NA NA NA no_subtype TRUE canonical NA NA 1154 None 2 9 1 TRUE 0 0 NA C coding 344 1032 11 1042 PB.4023.5 chr6 + 3126 1 incomplete-splice_match ZNF292 ENST00000369577.7 10610 8 6769 716 no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA C coding 422 1266 178 1443 PB.4023.2 chr6 + 2773 4 novel_not_in_catalog ZNF292 novel NA NA NA NA no_subtype FALSE canonical NA NA 602 None 9 18 1 TRUE 0 0 NA C coding 154 462 26 487 PB.4023.1 chr6 + 7022 8 full-splice_match ZNF292 ENST00000369577.7 10610 8 18 3570 no_subtype FALSE canonical NA NA 1045 None 5 5 0 FALSE 0 0 NA C coding 2332 6996 26 7021 PB.10745.2 chr22 + 2990 18 novel_not_in_catalog GGA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2029 None 3 7 0 FALSE 0 0 NA C coding 566 1698 440 2137 PB.10745.1 chr22 + 2784 17 full-splice_match GGA1 ENST00000343632.8 3159 17 371 4 no_subtype FALSE canonical NA NA 1824 None 69 5 0 FALSE 0 0 NA C coding 635 1905 28 1932 PB.1899.1 chr2 + 1683 7 full-splice_match MFF ENST00000354503.10 1085 7 18 -616 no_subtype FALSE canonical NA NA 837 None 9 2 0 FALSE 0 0 NA C coding 218 654 313 966 PB.3669.1 chr5 - 1316 8 full-splice_match RAB24 ENST00000303251.10 1311 8 -1 -4 no_subtype FALSE canonical NA NA 538 None 8 3 0 FALSE 0 0 NA C coding 203 609 422 1030 PB.2914.11 chr4 - 3810 27 novel_not_in_catalog SEC31A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 60 None 3 7 1 TRUE 0 0 NA C coding 873 2619 65 2683 PB.2914.10 chr4 - 3973 26 novel_in_catalog SEC31A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 18 None 2 8 2 FALSE 0 0 NA C coding 1151 3453 108 3560 PB.6432.1 chr11 + 2398 11 full-splice_match DPF2 ENST00000528416.5 2799 11 125 276 no_subtype FALSE canonical NA NA 1107 None 17 5 0 FALSE 0 0 NA A coding 391 1173 9 1181 PB.1907.2 chr2 + 2951 21 novel_not_in_catalog SP140L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2022 None 2 9 1 TRUE 0 0 NA B coding 370 1110 78 1187 PB.2914.17 chr4 - 3990 25 novel_in_catalog SEC31A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 36 None 2 9 2 FALSE 0 0 NA C coding 1151 3453 126 3578 PB.7833.1 chr14 + 5902 1 antisense novelGene_TMED8_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 38 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4158.1 chr6 + 730 3 full-splice_match ABRACL ENST00000367660.3 845 3 108 7 no_subtype FALSE canonical NA NA 153 None 2 5 1 FALSE 0 0 NA A coding 81 243 93 335 PB.1907.4 chr2 + 1480 15 fusion SP140L,SP100 novel NA NA NA NA no_subtype FALSE canonical NA NA 1435 None 2 1 0 FALSE 0 0 NA B coding 441 1323 157 1479 PB.1907.5 chr2 + 3552 25 fusion SP140L,SP100 novel NA NA NA NA no_subtype FALSE canonical NA NA 3198 None 2 11 2 TRUE 0 0 NA B coding 789 2367 157 2523 PB.6793.2 chr12 - 1171 3 novel_in_catalog SPSB2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 54 None 2 5 1 FALSE 0 0 NA B coding 263 789 140 928 PB.2914.15 chr4 - 4166 27 novel_in_catalog SEC31A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 137 None 7 5 0 FALSE 0 0 NA C coding 1205 3615 139 3753 PB.6793.1 chr12 - 1432 2 novel_in_catalog SPSB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1062 None 4 10 0 FALSE 0 0 NA B coding 263 789 399 1187 PB.428.1 chr1 - 3293 1 genic_intron novelGene_660 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A coding 76 228 84 311 PB.2559.1 chr3 - 3903 20 full-splice_match IFT80 ENST00000326448.11 4306 20 339 64 no_subtype FALSE canonical NA NA 48 None 2 9 0 FALSE 0 0 NA A coding 777 2331 95 2425 PB.7725.2 chr14 + 805 5 incomplete-splice_match KTN1 ENST00000555573.5 1712 12 905 2 internal_fragment FALSE canonical NA NA 329 None 2 2 1 FALSE 0 0 NA A coding 34 102 230 331 PB.971.2 chr1 - 1931 8 novel_not_in_catalog ADIPOR1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 85 None 2 8 2 TRUE 0 0 NA C coding 228 684 514 1197 PB.971.1 chr1 - 1391 8 full-splice_match ADIPOR1 ENST00000340990.9 2177 8 98 688 no_subtype FALSE canonical NA NA 107 None 85 1 1 FALSE 0 0 NA C coding 375 1125 202 1326 PB.3552.3 chr5 + 2853 8 novel_not_in_catalog RNF14 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1418 None 10 9 1 TRUE 0 0 NA B coding 348 1044 430 1473 PB.8503.1 chr16 + 2117 10 full-splice_match PLK1 ENST00000300093.8 2227 10 106 4 no_subtype TRUE canonical NA NA 1613 None 9 2 0 FALSE 0 0 NA A coding 603 1809 6 1814 PB.971.4 chr1 - 3070 3 novel_not_in_catalog ADIPOR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1913 None 2 12 0 TRUE 0 0 NA C coding 105 315 1968 2282 PB.3243.10 chr5 + 6106 2 novel_not_in_catalog PARP8 novel NA NA NA NA no_subtype FALSE canonical NA NA 1178 None 2 44 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.6408.1 chr11 + 760 6 full-splice_match PRDX5 ENST00000265462.8 893 6 120 13 no_subtype FALSE canonical NA NA 547 None 4 3 0 FALSE 0 0 NA A coding 162 486 165 650 PB.2914.19 chr4 - 4010 25 novel_not_in_catalog SEC31A novel NA NA NA NA no_subtype FALSE canonical NA NA 106 None 2 8 1 TRUE 0 0 NA C coding 1110 3330 269 3598 PB.9056.1 chr17 + 3954 20 full-splice_match LIG3 ENST00000378526.8 8400 20 18 4428 no_subtype FALSE canonical NA NA 2911 None 3 5 0 FALSE 0 0 NA A coding 1009 3027 116 3142 PB.5160.1 chr8 - 4068 1 incomplete-splice_match PLEC ENST00000398774.6 14646 32 10573 6 no_subtype FALSE canonical NA NA NA None 92 6 0 FALSE 0 0 NA B coding 963 2889 159 3047 PB.10989.1 chrX - 1554 1 genic_intron novelGene_527 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5159.1 chr8 - 4268 1 incomplete-splice_match PLEC ENST00000398774.6 14646 32 10377 2 no_subtype FALSE canonical NA NA NA None 5 11 0 FALSE 0 0 NA B coding 1050 3150 94 3243 PB.10782.5 chr22 + 2758 23 novel_not_in_catalog SGSM3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2332 None 6 10 1 TRUE 0 0 NA B coding 741 2223 185 2407 PB.7488.2 chr13 - 1860 3 genic_intron novelGene_489 novel NA NA NA NA no_subtype TRUE canonical NA NA 41 None 2 7 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.1519.1 chr2 + 3470 1 genic_intron novelGene_928 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10892.1 chrX - 2761 8 novel_not_in_catalog EIF1AX novel NA NA NA NA no_subtype FALSE canonical NA NA 197 None 11 23 1 TRUE 0 0 NA C coding 144 432 182 613 PB.10892.2 chrX - 1547 7 full-splice_match EIF1AX ENST00000379607.9 4427 7 13 2867 no_subtype FALSE canonical NA NA 207 None 14 13 0 FALSE 0 0 NA C coding 144 432 192 623 PB.6892.1 chr12 + 3927 28 novel_not_in_catalog DDX11 novel NA NA NA NA no_subtype TRUE canonical NA NA 2947 None 2 8 0 TRUE 0 0 NA A coding 906 2718 257 2974 PB.1372.2 chr2 + 2018 10 full-splice_match UGP2 ENST00000337130.9 2338 10 314 6 no_subtype FALSE canonical NA NA 1581 None 9 5 1 FALSE 0 0 NA C coding 508 1524 163 1686 PB.1865.1 chr2 + 4121 19 novel_not_in_catalog TTLL4 novel NA NA NA NA no_subtype FALSE canonical NA NA 3668 None 2 11 1 FALSE 0 0 NA B coding 494 1482 2257 3738 PB.9415.2 chr17 + 2783 4 full-splice_match C1QTNF1 ENST00000354124.7 2714 4 -73 4 no_subtype FALSE canonical NA NA 537 None 2 11 0 FALSE 0 0 NA C coding 281 843 243 1085 PB.9415.3 chr17 + 2787 4 full-splice_match C1QTNF1 ENST00000579760.5 1672 4 193 -1308 no_subtype FALSE canonical NA NA 541 None 82 11 0 FALSE 0 0 NA C coding 281 843 247 1089 PB.9168.2 chr17 - 1555 12 full-splice_match SLC25A39 ENST00000377095.9 1565 12 14 -4 no_subtype FALSE canonical NA NA 91 None 131 1 1 FALSE 0 0 NA C coding 359 1077 107 1183 PB.10662.17 chr22 + 841 5 fusion IGLV2-8,IGLL5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 390 None 2 15 1 TRUE 0 0 NA A coding 107 321 40 360 PB.10662.16 chr22 + 830 4 novel_not_in_catalog IGLV3-9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 382 None 3 12 1 TRUE 0 0 NA A coding 224 672 28 699 PB.10662.15 chr22 + 863 4 novel_not_in_catalog IGLV3-10 novel NA NA NA NA no_subtype FALSE canonical NA NA 414 None 3 5 1 TRUE 0 0 NA A coding 141 423 38 460 PB.10662.14 chr22 + 848 6 fusion IGLV2-18,IGLL5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 395 None 47 7 1 TRUE 0 0 NA A coding 118 354 39 392 PB.10662.13 chr22 + 898 4 novel_not_in_catalog IGLV1-36 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 441 None 3 2 1 TRUE 0 0 NA A coding 127 381 49 429 PB.10662.12 chr22 + 889 7 fusion IGLV1-40,IGLL5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 441 None 3 17 4 TRUE 0 0 NA A coding 121 363 396 758 PB.10662.11 chr22 + 846 5 novel_not_in_catalog IGLV7-43 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 391 None 10 10 2 TRUE 0 0 NA A coding 225 675 36 710 PB.10662.10 chr22 + 838 6 fusion IGLV5-45,IGLL5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 385 None 3 18 3 TRUE 0 0 NA A coding 133 399 304 702 PB.6518.1 chr11 - 3845 1 incomplete-splice_match FAM168A ENST00000064778.8 7296 9 3130 322 no_subtype FALSE canonical NA NA NA None 2 30 0 FALSE 0 0 NA A coding 119 357 2617 2973 PB.9820.1 chr19 - 1322 1 incomplete-splice_match PRKACA ENST00000308677.8 2677 10 1342 14 no_subtype FALSE canonical NA NA NA None 7 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2739.2 chr4 - 3547 18 novel_not_in_catalog AFAP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 163 None 17 16 0 TRUE 0 0 NA A coding 730 2190 166 2355 PB.979.1 chr1 - 1514 1 genic_intron novelGene_1379 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2544.3 chr3 + 3510 24 novel_not_in_catalog MME novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2284 None 3 2 1 FALSE 0 0 NA B coding 750 2250 132 2381 PB.3252.1 chr5 + 3205 2 full-splice_match SNX18 ENST00000381410.4 5218 2 36 1977 no_subtype FALSE canonical NA NA 1775 None 30 7 0 FALSE 0 0 NA A coding 624 1872 155 2026 PB.7795.1 chr14 + 1624 12 incomplete-splice_match RBM25 ENST00000261973.11 6910 19 96 5190 3prime_fragment FALSE canonical NA NA 1566 None 3 0 0 FALSE 0 0 NA B coding 478 1434 190 1623 PB.9168.6 chr17 - 1900 12 novel_not_in_catalog SLC25A39 novel NA NA NA NA no_subtype FALSE canonical NA NA 433 None 2 8 1 FALSE 0 0 NA C coding 359 1077 449 1525 PB.9840.2 chr19 + 3509 13 novel_not_in_catalog CYP4F3 novel NA NA NA NA no_subtype TRUE canonical NA NA 2610 None 4 6 0 FALSE 0 0 NA B coding 408 1224 1550 2773 PB.9840.3 chr19 + 2495 14 novel_in_catalog CYP4F3 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1592 None 2 6 1 FALSE 0 0 NA B coding 434 1302 454 1755 PB.9168.5 chr17 - 1785 11 novel_in_catalog SLC25A39 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 116 None 2 18 0 FALSE 0 0 NA C coding 175 525 886 1410 PB.1859.4 chr2 + 1985 15 full-splice_match SLC11A1 ENST00000233202.10 3852 15 266 1601 no_subtype FALSE canonical NA NA 1616 None 36 3 0 FALSE 0 0 NA C coding 550 1650 75 1724 PB.1633.10 chr2 + 1519 1 antisense novelGene_ZEB2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 15 3 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10644.1 chr22 + 3113 5 full-splice_match ZNF74 ENST00000400451.6 3159 5 42 4 no_subtype FALSE canonical NA NA 815 None 6 2 0 FALSE 0 0 NA A coding 644 1932 473 2404 PB.9409.1 chr17 - 1579 1 novel_in_catalog CYTH1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10312.6 chr20 - 3817 1 genic_intron novelGene_308 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A coding 103 309 1995 2303 PB.10312.4 chr20 - 2583 3 novel_in_catalog BCL2L1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 284 None 15 8 0 FALSE 0 0 NA C coding 233 699 397 1095 PB.2210.1 chr3 - 2865 1 genic NAT6 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA A coding 286 858 1799 2656 PB.5449.6 chr9 - 2876 26 incomplete-splice_match FKBP15 ENST00000238256.7 4336 28 65 1395 internal_fragment FALSE canonical NA NA 106 None 2 1 0 FALSE 0 0 NA C coding 941 2823 54 2876 PB.3669.5 chr5 - 1453 8 novel_in_catalog RAB24 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 308 None 15 4 0 FALSE 0 0 NA C coding 184 552 341 892 PB.4591.1 chr7 - 2093 5 full-splice_match SYPL1 ENST00000455385.6 2151 5 48 10 no_subtype FALSE canonical NA NA 144 None 2 6 0 FALSE 0 0 NA C coding 241 723 76 798 PB.4943.1 chr8 + 3209 9 novel_not_in_catalog RAB2A novel NA NA NA NA no_subtype TRUE canonical NA NA 789 None 4 13 0 TRUE 0 0 NA B coding 166 498 385 882 PB.5598.3 chr9 - 3477 19 novel_not_in_catalog RALGDS novel NA NA NA NA no_subtype FALSE canonical NA NA 191 None 3 10 1 TRUE 0 0 NA B coding 683 2049 670 2718 PB.4943.2 chr8 + 2835 3 novel_not_in_catalog RAB2A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2619 None 2 26 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.1386.1 chr2 - 4442 6 full-splice_match SPRED2 ENST00000356388.8 4097 6 -348 3 no_subtype FALSE canonical NA NA 564 None 2 13 0 FALSE 0 0 NA A coding 418 1254 539 1792 PB.4943.4 chr8 + 2553 1 genic_intron novelGene_577 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4474.1 chr7 - 1573 2 full-splice_match FGL2 ENST00000248598.5 4261 2 -58 2746 no_subtype FALSE canonical NA NA 704 None 199 0 0 FALSE 0 0 NA C coding 439 1317 92 1408 PB.4581.3 chr7 - 2897 1 novel_in_catalog ORC5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 22 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1921.3 chr2 + 5795 30 novel_not_in_catalog GIGYF2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3986 None 2 9 2 TRUE 0 0 NA B coding 1300 3900 152 4051 PB.9024.8 chr17 - 1393 1 novel_in_catalog SSH2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.592.2 chr1 - 4088 20 full-splice_match CSDE1 ENST00000358528.8 4076 20 -21 9 no_subtype FALSE canonical NA NA 61 None 8 7 0 FALSE 0 0 NA C coding 798 2394 449 2842 PB.1921.4 chr2 + 2813 2 genic_intron novelGene_1413 novel NA NA NA NA no_subtype FALSE canonical NA NA 1893 None 2 21 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6388.1 chr11 + 1566 4 novel_not_in_catalog TTC9C novel NA NA NA NA no_subtype TRUE canonical NA NA 1338 None 2 5 0 TRUE 0 0 NA A coding 171 513 346 858 PB.9024.1 chr17 - 2758 1 incomplete-splice_match SSH2 ENST00000269033.7 9327 15 5300 1270 no_subtype FALSE canonical NA NA NA None 14 22 0 FALSE 0 0 NA B coding 100 300 998 1297 PB.9024.4 chr17 - 5525 14 novel_in_catalog SSH2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 283 None 11 8 0 FALSE 0 0 NA B coding 1430 4290 156 4445 PB.9024.5 chr17 - 5555 15 novel_not_in_catalog SSH2 novel NA NA NA NA no_subtype FALSE canonical NA NA 127 None 2 8 0 TRUE 0 0 NA B coding 1417 4251 106 4356 PB.1814.1 chr2 + 1740 1 genic_intron novelGene_1384 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3619.2 chr5 - 3417 12 full-splice_match CLINT1 ENST00000411809.6 3440 12 17 6 no_subtype FALSE canonical NA NA 229 None 75 8 0 FALSE 0 0 NA C coding 625 1875 189 2063 PB.9883.1 chr19 - 1789 11 full-splice_match ISYNA1 ENST00000338128.12 2420 11 197 434 no_subtype FALSE canonical NA NA 12 None 10 4 1 FALSE 0 0 NA A coding 558 1674 22 1695 PB.3619.1 chr5 - 3360 12 full-splice_match CLINT1 ENST00000523908.5 2346 12 -16 -998 no_subtype FALSE canonical NA NA 230 None 24 9 0 FALSE 0 0 NA C coding 643 1929 190 2118 PB.5026.1 chr8 - 3097 1 incomplete-splice_match UQCRB ENST00000287022.9 5575 4 1719 760 no_subtype FALSE canonical NA NA NA None 6 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5172.1 chr8 + 2127 13 full-splice_match HSF1 ENST00000528838.5 2142 13 7 8 no_subtype FALSE canonical NA NA 1537 None 16 5 0 FALSE 0 0 NA C coding 529 1587 154 1740 PB.10798.1 chr22 - 1455 3 full-splice_match SNU13 ENST00000355257.7 1503 3 25 23 no_subtype FALSE canonical NA NA 91 None 51 7 0 FALSE 0 0 NA C coding 128 384 89 472 PB.3764.1 chr6 - 2723 1 genic_intron novelGene_152 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10798.2 chr22 - 1467 3 full-splice_match SNU13 ENST00000215956.9 1630 3 176 -13 no_subtype FALSE canonical NA NA 91 None 9 8 0 FALSE 0 0 NA C coding 128 384 89 472 PB.8600.5 chr16 + 4145 26 novel_not_in_catalog ADCY7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3431 None 2 12 1 TRUE 0 0 NA C coding 1080 3240 336 3575 PB.8600.4 chr16 + 6186 26 novel_in_catalog ADCY7 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 3415 None 6 31 0 FALSE 0 0 NA C coding 1080 3240 320 3559 PB.1640.1 chr2 - 3237 7 novel_not_in_catalog RBM43 novel NA NA NA NA no_subtype FALSE canonical NA NA 169 None 2 14 2 TRUE 0 0 NA A coding 264 792 431 1222 PB.8600.6 chr16 + 5621 25 full-splice_match ADCY7 ENST00000254235.7 6138 25 -1 518 no_subtype FALSE canonical NA NA 3365 None 10 19 0 FALSE 0 0 NA C coding 1080 3240 270 3509 PB.8600.1 chr16 + 5624 25 full-splice_match ADCY7 ENST00000254235.7 6138 25 -4 518 no_subtype FALSE canonical NA NA 3368 None 2 21 0 FALSE 0 0 NA C coding 1080 3240 273 3512 PB.7592.4 chr14 - 6070 45 novel_not_in_catalog TEP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 15 None 3 4 1 TRUE 0 0 NA B coding 1888 5664 38 5701 PB.8600.3 chr16 + 6208 26 novel_not_in_catalog ADCY7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3443 None 4 28 1 FALSE 0 0 NA C coding 1080 3240 348 3587 PB.8600.2 chr16 + 6789 26 novel_in_catalog ADCY7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3454 None 30 38 0 FALSE 0 0 NA C coding 1080 3240 359 3598 PB.1039.1 chr1 + 4224 16 novel_not_in_catalog DTL novel NA NA NA NA no_subtype FALSE canonical NA NA 2387 None 4 12 1 TRUE 0 0 NA B coding 730 2190 140 2329 PB.1039.2 chr1 + 2784 16 novel_not_in_catalog DTL novel NA NA NA NA no_subtype FALSE canonical NA NA 2343 None 4 5 1 TRUE 0 0 NA B coding 730 2190 121 2310 PB.1039.3 chr1 + 2957 4 novel_not_in_catalog DTL novel NA NA NA NA no_subtype FALSE canonical NA NA 1125 None 2 12 1 TRUE 0 0 NA B coding 232 696 372 1067 PB.287.2 chr1 + 1260 11 novel_not_in_catalog PPIE novel NA NA NA NA no_subtype FALSE canonical NA NA 848 None 2 3 2 TRUE 0 0 NA C coding 301 903 12 914 PB.287.1 chr1 + 1256 10 full-splice_match PPIE ENST00000324379.9 1277 10 9 12 no_subtype FALSE canonical NA NA 847 None 6 1 0 FALSE 0 0 NA C coding 301 903 11 913 PB.2114.1 chr3 - 3598 1 genic_intron novelGene_411 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 35 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4764.6 chr7 - 7415 24 novel_not_in_catalog KMT2C novel NA NA NA NA no_subtype TRUE canonical NA NA 53 None 2 8 0 TRUE 0 0 NA B coding 2464 7392 23 7414 PB.1808.1 chr2 + 600 1 full-splice_match RPL12P16 ENST00000431098.1 498 1 -65 -37 no_subtype FALSE canonical NA NA NA None 5 0 0 FALSE 0 0 NA A coding 165 495 66 560 PB.7582.1 chr13 - 1377 10 novel_not_in_catalog GRTP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 108 None 3 6 2 TRUE 0 0 NA A coding 336 1008 77 1084 PB.2823.2 chr4 + 1804 1 novel_in_catalog SLC30A9 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6555.4 chr11 - 2981 11 incomplete-splice_match RSF1 ENST00000308488.10 11550 16 302 8267 internal_fragment FALSE canonical NA NA 188 None 3 0 0 FALSE 0 0 NA B coding 993 2979 2 2980 PB.6023.1 chr10 + 3457 12 full-splice_match PDCD4 ENST00000280154.11 3602 12 143 2 no_subtype FALSE canonical NA NA 1480 None 63 14 0 FALSE 0 0 NA C coding 469 1407 132 1538 PB.3587.16 chr5 - 5665 4 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2624 None 5 34 3 TRUE 0 0 NA B coding 214 642 4853 5494 PB.6842.6 chr12 + 4037 15 full-splice_match ATF7IP ENST00000544627.5 4847 15 293 517 no_subtype FALSE canonical NA NA 3444 None 3 1 0 FALSE 0 0 NA C coding 1278 3834 28 3861 PB.6842.5 chr12 + 3003 1 genic_intron novelGene_114 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 30 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6842.4 chr12 + 3812 13 full-splice_match ATF7IP ENST00000543189.5 4887 13 -5 1080 no_subtype FALSE canonical NA NA 3241 None 3 2 0 FALSE 0 0 NA C coding 1105 3315 148 3462 PB.6842.2 chr12 + 1403 1 novel_in_catalog ATF7IP novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6842.1 chr12 + 4123 15 full-splice_match ATF7IP ENST00000536444.5 8774 15 -46 4697 no_subtype FALSE canonical NA NA 3542 None 15 1 0 FALSE 0 0 NA C coding 1269 3807 153 3959 PB.2300.1 chr3 - 1990 1 incomplete-splice_match FOXP1 ENST00000475937.5 4967 20 2944 34 no_subtype FALSE canonical NA NA NA None 28 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10107.2 chr19 + 1325 6 full-splice_match FCGRT ENST00000426395.7 1559 6 231 3 no_subtype FALSE canonical NA NA 1004 None 41 0 0 FALSE 0 0 NA C coding 365 1095 17 1111 PB.2730.1 chr4 + 3216 8 full-splice_match WFS1 ENST00000503569.5 3255 8 37 2 no_subtype FALSE canonical NA NA 991 None 45 3 0 FALSE 0 0 NA A coding 890 2670 131 2800 PB.9877.1 chr19 + 931 7 full-splice_match IFI30 ENST00000407280.3 1134 7 147 56 no_subtype FALSE canonical NA NA 718 None 58 2 0 FALSE 0 0 NA A coding 250 750 29 778 PB.592.1 chr1 - 2903 19 full-splice_match CSDE1 ENST00000339438.10 4006 19 2 1101 no_subtype FALSE canonical NA NA 57 None 666 1 0 FALSE 0 0 NA C coding 767 2301 445 2745 PB.10990.2 chrX - 5494 21 novel_in_catalog PHF8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 166 None 2 19 1 FALSE 0 0 NA C coding 923 2769 259 3027 PB.297.1 chr1 + 1405 10 novel_not_in_catalog NFYC novel NA NA NA NA no_subtype FALSE canonical NA NA 1010 None 16 4 0 FALSE 0 0 NA B coding 335 1005 123 1127 PB.297.2 chr1 + 1806 10 novel_not_in_catalog NFYC novel NA NA NA NA no_subtype FALSE canonical NA NA 1088 None 2 2 0 FALSE 0 0 NA B coding 439 1317 201 1517 PB.297.3 chr1 + 1876 13 novel_not_in_catalog NFYC novel NA NA NA NA no_subtype FALSE canonical NA NA 990 None 4 5 0 TRUE 0 0 NA B coding 335 1005 100 1104 PB.3599.2 chr5 + 2783 2 genic RN7SL655P novel NA NA NA NA no_subtype FALSE non_canonical NA NA 556 None 4 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1025.2 chr1 - 3018 5 novel_in_catalog LAMB3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 125 None 3 6 0 FALSE 0 0 NA C coding 104 312 352 663 PB.1025.1 chr1 - 4007 23 full-splice_match LAMB3 ENST00000356082.8 4055 23 -27 75 no_subtype FALSE canonical NA NA 125 None 101 3 0 FALSE 0 0 NA C coding 1172 3516 163 3678 PB.7529.1 chr13 - 4132 11 novel_not_in_catalog TBC1D4 novel NA NA NA NA no_subtype FALSE canonical NA NA 345 None 6 13 0 TRUE 0 0 NA B coding 515 1545 473 2017 PB.1885.2 chr2 + 3145 17 novel_not_in_catalog ACSL3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2426 None 3 12 1 TRUE 0 0 NA C coding 709 2127 455 2581 PB.9552.2 chr18 + 2718 11 novel_not_in_catalog SLC14A1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1156 None 4 14 0 TRUE 0 0 NA B coding 389 1167 161 1327 PB.6903.1 chr12 - 2940 20 full-splice_match CPNE8 ENST00000331366.9 3489 20 40 509 no_subtype FALSE canonical NA NA 155 None 10 4 0 FALSE 0 0 NA A coding 564 1692 58 1749 PB.11144.3 chrX + 4156 33 full-splice_match STAG2 ENST00000371157.7 5991 33 60 1775 no_subtype FALSE canonical NA NA 3848 None 22 1 0 FALSE 0 0 NA C coding 1231 3693 177 3869 PB.9781.1 chr19 - 1500 8 full-splice_match ECSIT ENST00000270517.11 1700 8 31 169 no_subtype FALSE canonical NA NA 82 None 40 2 0 FALSE 0 0 NA A coding 431 1293 106 1398 PB.414.1 chr1 - 1740 1 genic_intron novelGene_614 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4800.2 chr8 - 1961 10 full-splice_match CTSB ENST00000353047.10 3875 10 111 1803 no_subtype FALSE canonical NA NA 118 None 469 17 0 FALSE 0 0 NA C coding 339 1017 144 1160 PB.4800.1 chr8 - 3073 11 novel_not_in_catalog CTSB novel NA NA NA NA no_subtype TRUE non_canonical NA NA 66 None 342 26 1 TRUE 0 0 NA C coding 339 1017 92 1108 PB.3600.1 chr5 - 2784 2 antisense novelGene_RN7SL655P_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2243 None 14 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2529.1 chr3 + 2788 1 novel_in_catalog TSC22D2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 7 0 FALSE 0 0 NA B coding 692 2076 392 2467 PB.7183.1 chr12 - 2885 3 full-splice_match IKBIP ENST00000299157.4 3189 3 297 7 no_subtype FALSE canonical NA NA 256 None 4 20 0 FALSE 0 0 NA A coding 377 1131 78 1208 PB.5920.1 chr10 + 3457 22 full-splice_match KIF11 ENST00000260731.4 4860 22 -137 1540 no_subtype TRUE canonical NA NA 3266 None 4 1 0 FALSE 0 0 NA A coding 1056 3168 228 3395 PB.978.1 chr1 - 2941 3 full-splice_match FMOD ENST00000354955.4 3310 3 365 4 no_subtype FALSE canonical NA NA 92 None 31 6 0 FALSE 0 0 NA A coding 376 1128 100 1227 PB.1223.6 chr2 + 1780 1 incomplete-splice_match RAB10 ENST00000264710.4 3535 6 1710 46 no_subtype FALSE canonical NA NA NA None 3 2 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7529.3 chr13 - 3585 11 novel_in_catalog TBC1D4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 893 None 2 7 0 FALSE 0 0 NA B coding 737 2211 396 2606 PB.10211.1 chr19 - 890 6 full-splice_match CHMP2A ENST00000312547.6 913 6 19 4 no_subtype FALSE canonical NA NA 118 None 3 2 0 FALSE 0 0 NA A coding 222 666 143 808 PB.4788.1 chr8 + 2086 7 full-splice_match ERI1 ENST00000250263.7 4615 7 93 2436 no_subtype TRUE canonical NA NA 974 None 5 3 0 FALSE 0 0 NA A coding 349 1047 168 1214 PB.7717.1 chr14 - 2919 6 full-splice_match GCH1 ENST00000622544.4 2923 6 3 1 no_subtype FALSE canonical NA NA 501 None 3 12 0 FALSE 0 0 NA A coding 250 750 159 908 PB.1592.1 chr2 + 4085 1 genic_intron novelGene_1145 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1615.5 chr2 + 1404 1 genic_intron novelGene_1206 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5598.4 chr9 - 3396 19 novel_not_in_catalog RALGDS novel NA NA NA NA no_subtype FALSE canonical NA NA 210 None 2 16 0 TRUE 0 0 NA B coding 856 2568 79 2646 PB.6051.2 chr10 + 2692 3 novel_not_in_catalog GRK5 novel NA NA NA NA no_subtype FALSE canonical NA NA 804 None 2 8 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.6051.1 chr10 + 2518 16 full-splice_match GRK5 ENST00000392870.2 2654 16 131 5 no_subtype FALSE canonical NA NA 1872 None 2 7 0 FALSE 0 0 NA C coding 590 1770 199 1968 PB.5004.1 chr8 + 1702 1 incomplete-splice_match CPNE3 ENST00000614678.1 4201 7 2462 38 no_subtype FALSE canonical NA NA NA None 9 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4090.1 chr6 + 1967 2 antisense novelGene_FYN_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 59 None 2 8 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.3282.1 chr5 - 1821 2 genic_intron novelGene_583 novel NA NA NA NA no_subtype FALSE canonical NA NA 698 None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5921.3 chr10 + 1539 4 novel_not_in_catalog HHEX novel NA NA NA NA no_subtype FALSE canonical NA NA 444 None 7 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3639.5 chr5 - 3604 3 novel_not_in_catalog LCP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 233 None 2 19 1 TRUE 0 0 NA B coding 51 153 156 308 PB.10392.1 chr20 - 1585 4 full-splice_match OSER1 ENST00000255174.2 1572 4 -20 7 no_subtype FALSE canonical NA NA 116 None 37 3 0 FALSE 0 0 NA A coding 292 876 158 1033 PB.3639.1 chr5 - 2380 22 novel_not_in_catalog LCP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 246 None 23 4 0 TRUE 0 0 NA B coding 533 1599 169 1767 PB.3639.2 chr5 - 1616 8 novel_not_in_catalog LCP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 260 None 6 3 0 TRUE 0 0 NA B coding 214 642 183 824 PB.3639.3 chr5 - 2946 4 novel_not_in_catalog LCP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 254 None 26 13 1 TRUE 0 0 NA B coding 63 189 177 365 PB.10123.1 chr19 - 2583 10 full-splice_match SIGLEC11 ENST00000426971.2 2479 10 -112 8 no_subtype FALSE canonical NA NA 188 None 47 3 1 FALSE 0 0 NA C coding 626 1878 41 1918 PB.10123.3 chr19 - 2567 12 novel_not_in_catalog SIGLEC11 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 22 1 TRUE 0 0 NA C coding 467 1401 2 1402 PB.1159.1 chr1 - 1763 8 full-splice_match TFB2M ENST00000366514.4 1848 8 73 12 no_subtype FALSE canonical NA NA 426 None 9 2 0 FALSE 0 0 NA A coding 396 1188 114 1301 PB.10123.5 chr19 - 3029 11 novel_not_in_catalog SIGLEC11 novel NA NA NA NA no_subtype FALSE canonical NA NA 83 None 2 12 1 TRUE 0 0 NA C coding 470 1410 8 1417 PB.840.3 chr1 - 2430 1 genic_intron novelGene_1290 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2238.2 chr3 + 3155 14 novel_not_in_catalog NISCH novel NA NA NA NA no_subtype FALSE canonical NA NA 1430 None 2 2 0 TRUE 0 0 NA B coding 583 1749 15 1763 PB.9488.1 chr18 + 2906 1 full-splice_match CHMP1B ENST00000526991.2 3054 1 50 98 no_subtype FALSE canonical NA NA NA None 91 16 0 FALSE 0 0 NA A coding 196 588 76 663 PB.4219.1 chr6 + 3620 18 full-splice_match SNX9 ENST00000392185.7 4198 18 29 549 no_subtype FALSE canonical NA NA 1882 None 6 12 0 FALSE 0 0 NA C coding 595 1785 143 1927 PB.2238.1 chr3 + 2576 15 novel_not_in_catalog NISCH novel NA NA NA NA no_subtype TRUE canonical NA NA 1546 None 19 0 0 TRUE 0 0 NA B coding 515 1545 19 1563 PB.2238.4 chr3 + 5507 8 novel_in_catalog NISCH novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4311 None 2 20 0 FALSE 0 0 NA B coding 993 2979 1941 4919 PB.6037.2 chr10 - 3246 20 novel_not_in_catalog AFAP1L2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 63 None 2 6 1 TRUE 0 0 NA B coding 818 2454 48 2501 PB.5082.2 chr8 - 3082 25 full-splice_match ENPP2 ENST00000075322.10 2651 25 0 -431 no_subtype FALSE canonical NA NA 92 None 124 0 0 FALSE 0 0 NA C coding 863 2589 60 2648 PB.5082.3 chr8 - 3119 25 novel_in_catalog ENPP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 125 None 5 0 0 FALSE 0 0 NA C coding 859 2577 105 2681 PB.3121.2 chr4 - 1900 14 novel_in_catalog DDX60L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 101 None 9 2 0 FALSE 0 0 NA B coding 563 1689 212 1900 PB.5082.1 chr8 - 3071 25 novel_in_catalog ENPP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 92 None 39 0 0 FALSE 0 0 NA C coding 859 2577 60 2636 PB.3121.4 chr4 - 2043 15 novel_not_in_catalog DDX60L novel NA NA NA NA no_subtype FALSE canonical NA NA 124 None 2 7 2 FALSE 0 0 NA B coding 563 1689 355 2043 PB.4780.1 chr8 + 3698 8 novel_not_in_catalog MCPH1 novel NA NA NA NA no_subtype FALSE canonical NA NA 692 None 2 20 1 FALSE 0 0 NA A coding 500 1500 353 1852 PB.5082.4 chr8 - 3158 26 full-splice_match ENPP2 ENST00000522826.5 2667 26 -59 -432 no_subtype FALSE canonical NA NA 92 None 11 2 1 FALSE 0 0 NA C coding 888 2664 60 2723 PB.1916.1 chr2 - 2578 14 full-splice_match NCL ENST00000322723.8 4034 14 76 1380 no_subtype FALSE canonical NA NA 183 None 292 4 0 FALSE 0 0 NA A coding 710 2130 166 2295 PB.3490.1 chr5 + 1388 4 full-splice_match CAMLG ENST00000297156.3 2221 4 47 786 no_subtype FALSE canonical NA NA 772 None 31 2 0 FALSE 0 0 NA C coding 296 888 74 961 PB.4876.1 chr8 + 825 4 novel_not_in_catalog EIF4EBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 442 None 2 1 1 TRUE 0 0 NA A coding 118 354 71 424 PB.3490.3 chr5 + 1612 3 novel_in_catalog CAMLG novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 997 None 2 5 0 FALSE 0 0 NA C coding 134 402 785 1186 PB.3490.2 chr5 + 1356 3 novel_in_catalog CAMLG novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 741 None 2 2 0 FALSE 0 0 NA C coding 274 822 109 930 PB.5584.1 chr9 + 2809 6 novel_not_in_catalog RP11-40A7.2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 968 None 4 20 1 TRUE 0 0 NA A coding 226 678 438 1115 PB.2654.14 chr3 + 3201 11 novel_not_in_catalog EIF4A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1110 None 2 23 2 TRUE 0 0 NA C coding 314 942 34 975 PB.1169.1 chr2 - 1739 10 full-splice_match SH3YL1 ENST00000356150.9 1763 10 23 1 no_subtype FALSE canonical NA NA 59 None 4 5 0 FALSE 0 0 NA A coding 342 1026 59 1084 PB.9713.3 chr19 - 2140 17 novel_in_catalog GPR108 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 105 None 2 4 0 FALSE 0 0 NA C coding 301 903 980 1882 PB.9713.1 chr19 - 1919 18 full-splice_match GPR108 ENST00000264080.11 2057 18 -6 144 no_subtype FALSE canonical NA NA 153 None 60 2 0 FALSE 0 0 NA C coding 543 1629 34 1662 PB.2974.2 chr4 - 1681 8 full-splice_match DNAJB14 ENST00000442697.6 6075 8 117 4277 no_subtype TRUE canonical NA NA 171 None 22 1 0 FALSE 0 0 NA C coding 379 1137 39 1175 PB.5469.1 chr9 - 5895 23 novel_not_in_catalog TNC novel NA NA NA NA no_subtype FALSE canonical NA NA 172 None 6 20 0 TRUE 0 0 NA B coding 1655 4965 309 5273 PB.3141.1 chr4 - 1455 8 full-splice_match ENPP6 ENST00000296741.6 3936 8 28 2453 no_subtype FALSE canonical NA NA 355 None 8 0 0 FALSE 0 0 NA A coding 440 1320 115 1434 PB.4764.3 chr7 - 3513 7 incomplete-splice_match KMT2C ENST00000473186.5 12854 46 4993 4348 internal_fragment FALSE canonical NA NA 160 None 5 4 0 FALSE 0 0 NA B coding 1126 3378 135 3512 PB.8770.1 chr16 + 2638 2 genic CDH13 novel NA NA NA NA no_subtype FALSE canonical NA NA 2337 None 3 12 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.6082.2 chr10 + 1780 6 novel_not_in_catalog BCCIP novel NA NA NA NA no_subtype FALSE canonical NA NA 1351 None 2 11 0 TRUE 0 0 NA C coding 200 600 16 615 PB.3470.3 chr5 - 2086 10 full-splice_match SEPT8 ENST00000296873.11 4394 10 165 2143 no_subtype FALSE canonical NA NA 149 None 27 1 0 FALSE 0 0 NA C coding 429 1287 120 1406 PB.7823.3 chr14 + 1128 1 incomplete-splice_match FOS ENST00000303562.8 2158 4 1028 3 no_subtype FALSE canonical NA NA NA None 17 1 0 FALSE 0 0 NA C coding 89 267 55 321 PB.3470.1 chr5 - 1794 11 novel_not_in_catalog SEPT8 novel NA NA NA NA no_subtype FALSE canonical NA NA 132 None 2 0 0 FALSE 0 0 NA C coding 483 1449 103 1551 PB.8892.2 chr17 + 1334 7 novel_in_catalog ELP5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 976 None 2 4 0 FALSE 0 0 NA C coding 207 621 468 1088 PB.8161.10 chr15 - 5564 3 genic RP11-16E23.3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 223 None 2 53 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.8892.1 chr17 + 1173 8 full-splice_match ELP5 ENST00000396628.6 1423 8 238 12 no_subtype FALSE canonical NA NA 815 None 4 2 0 FALSE 0 0 NA C coding 300 900 28 927 PB.8680.1 chr16 - 2889 3 novel_not_in_catalog RANBP10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 107 None 3 11 2 TRUE 0 0 NA A non_coding NA NA NA NA PB.6122.1 chr11 + 1291 8 full-splice_match TSPAN4 ENST00000397411.6 1025 8 23 -289 no_subtype FALSE canonical NA NA 746 None 4 2 0 FALSE 0 0 NA C coding 238 714 99 812 PB.6122.2 chr11 + 1391 9 full-splice_match TSPAN4 ENST00000397397.6 1423 9 27 5 no_subtype FALSE canonical NA NA 846 None 7 3 0 FALSE 0 0 NA C coding 238 714 199 912 PB.6122.3 chr11 + 1352 9 full-splice_match TSPAN4 ENST00000397406.5 1426 9 64 10 no_subtype FALSE canonical NA NA 807 None 19 3 0 FALSE 0 0 NA C coding 238 714 160 873 PB.7002.1 chr12 - 2181 12 full-splice_match ATF7 ENST00000456903.8 5218 12 -4 3041 no_subtype FALSE canonical NA NA 54 None 5 5 0 FALSE 0 0 NA C coding 483 1449 76 1524 PB.7002.2 chr12 - 2209 12 full-splice_match ATF7 ENST00000420353.6 6680 12 46 4425 no_subtype FALSE canonical NA NA 83 None 3 5 0 FALSE 0 0 NA C coding 483 1449 105 1553 PB.9694.1 chr19 + 2884 2 genic_intron novelGene_36 novel NA NA NA NA no_subtype FALSE canonical NA NA 2577 None 5 25 0 FALSE 0 0 NA A coding 177 531 841 1371 PB.6082.6 chr10 + 6229 3 genic_intron novelGene_1092 novel NA NA NA NA no_subtype TRUE canonical NA NA 2284 None 3 38 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3162.3 chr5 - 2751 18 novel_not_in_catalog BRD9 novel NA NA NA NA no_subtype FALSE canonical NA NA 194 None 2 6 2 TRUE 0 0 NA B coding 412 1236 938 2173 PB.3162.2 chr5 - 2511 18 novel_not_in_catalog BRD9 novel NA NA NA NA no_subtype FALSE canonical NA NA 194 None 8 9 2 TRUE 0 0 NA B coding 597 1791 143 1933 PB.3162.1 chr5 - 2509 18 novel_not_in_catalog BRD9 novel NA NA NA NA no_subtype TRUE canonical NA NA 184 None 2 7 2 TRUE 0 0 NA B coding 599 1797 133 1929 PB.1702.1 chr2 - 2982 1 genic_intron novelGene_1325 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3587.2 chr5 - 2724 18 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 177 None 2 6 1 TRUE 0 0 NA B coding 564 1692 201 1892 PB.2022.1 chr3 + 1543 1 genic_intron novelGene_123 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2596.2 chr3 + 1729 1 antisense novelGene_TBL1XR1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7447.1 chr13 - 3056 3 genic_intron novelGene_406 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2809 None 2 24 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2408.1 chr3 - 3685 12 novel_not_in_catalog FSTL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 97 None 169 22 1 TRUE 0 0 NA A coding 308 924 98 1021 PB.1200.6 chr2 - 3147 1 genic_intron novelGene_149 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 8 0 FALSE 0 0 NA A coding 119 357 1312 1668 PB.3149.2 chr4 + 2944 5 novel_not_in_catalog SLC25A4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1323 None 2 14 0 TRUE 0 0 NA C coding 298 894 108 1001 PB.3149.1 chr4 + 1292 4 full-splice_match SLC25A4 ENST00000281456.10 4440 4 34 3114 no_subtype FALSE canonical NA NA 837 None 13 4 0 FALSE 0 0 NA C coding 298 894 99 992 PB.2127.3 chr3 + 2929 6 novel_in_catalog SNRK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1184 None 2 14 0 FALSE 0 0 NA C coding 360 1080 241 1320 PB.4205.2 chr6 - 2194 5 full-splice_match FBXO5 ENST00000367241.3 2221 5 12 15 no_subtype FALSE canonical NA NA 334 None 2 10 0 FALSE 0 0 NA C coding 401 1203 370 1572 PB.678.4 chr1 - 3352 12 full-splice_match PI4KB ENST00000368873.5 3340 12 -16 4 no_subtype FALSE canonical NA NA 157 None 4 6 2 FALSE 0 0 NA C coding 816 2448 186 2633 PB.4330.1 chr7 - 1562 8 full-splice_match TRA2A ENST00000297071.8 1845 8 52 231 no_subtype FALSE canonical NA NA 201 None 19 9 0 FALSE 0 0 NA C coding 282 846 166 1011 PB.2833.3 chr4 + 3053 6 novel_not_in_catalog NIPAL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 687 None 2 13 0 FALSE 0 0 NA C coding 227 681 615 1295 PB.4330.3 chr7 - 1667 9 novel_not_in_catalog TRA2A novel NA NA NA NA no_subtype FALSE canonical NA NA 213 None 2 11 0 TRUE 0 0 NA C coding 239 717 178 894 PB.4330.2 chr7 - 1782 10 novel_not_in_catalog TRA2A novel NA NA NA NA no_subtype TRUE canonical NA NA 196 None 9 12 0 TRUE 0 0 NA C coding 282 846 161 1006 PB.4330.5 chr7 - 1517 1 genic_intron novelGene_220 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8492.4 chr16 + 3639 22 novel_not_in_catalog POLR3E novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3080 None 2 12 0 TRUE 0 0 NA B coding 708 2124 1011 3134 PB.4330.7 chr7 - 2757 3 novel_not_in_catalog TRA2A novel NA NA NA NA no_subtype FALSE canonical NA NA 185 None 4 23 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.4330.6 chr7 - 1750 1 genic_intron novelGene_221 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4330.8 chr7 - 3281 2 novel_not_in_catalog TRA2A novel NA NA NA NA no_subtype FALSE canonical NA NA 1373 None 17 23 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.10010.1 chr19 - 2179 7 full-splice_match TGFB1 ENST00000221930.5 2769 7 -13 603 no_subtype FALSE canonical NA NA 1235 None 17 2 0 FALSE 0 0 NA A coding 390 1170 881 2050 PB.1287.5 chr2 - 1203 3 incomplete-splice_match SRSF7 ENST00000443213.5 1903 7 -7 707 internal_fragment FALSE canonical NA NA 131 None 8 0 0 FALSE 0 0 NA C coding 132 396 104 499 PB.1287.4 chr2 - 1929 7 full-splice_match SRSF7 ENST00000443213.5 1903 7 -8 -18 no_subtype FALSE canonical NA NA 132 None 4 9 0 FALSE 0 0 NA C coding 132 396 105 500 PB.4265.4 chr7 - 6173 43 incomplete-splice_match INTS1 ENST00000404767.7 6959 48 783 3 5prime_fragment FALSE canonical NA NA 147 None 3 4 0 FALSE 0 0 NA C coding 1930 5790 84 5873 PB.4265.5 chr7 - 3567 23 novel_not_in_catalog INTS1 novel NA NA NA NA no_subtype TRUE canonical NA NA 48 None 2 3 0 TRUE 0 0 NA C coding 1006 3018 90 3107 PB.1287.1 chr2 - 2759 8 novel_in_catalog SRSF7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 133 None 2 22 0 FALSE 0 0 NA C coding 137 411 106 516 PB.4265.3 chr7 - 6967 48 full-splice_match INTS1 ENST00000404767.7 6959 48 -11 3 no_subtype FALSE canonical NA NA 56 None 26 4 0 FALSE 0 0 NA C coding 2190 6570 98 6667 PB.1287.3 chr2 - 1052 8 full-splice_match SRSF7 ENST00000313117.10 2489 8 135 1302 no_subtype FALSE canonical NA NA 131 None 18 3 0 FALSE 0 0 NA C coding 238 714 104 817 PB.1287.2 chr2 - 1502 9 full-splice_match SRSF7 ENST00000425778.5 2857 9 56 1299 no_subtype FALSE canonical NA NA 131 None 11 2 0 FALSE 0 0 NA C coding 137 411 104 514 PB.6734.1 chr11 + 2910 3 genic_intron novelGene_1110 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2706 None 2 16 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.6662.3 chr11 - 1518 1 novel_in_catalog JAML novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9296.1 chr17 + 1362 13 novel_in_catalog PSMC5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1259 None 26 0 0 FALSE 0 0 NA A coding 406 1218 93 1310 PB.6754.10 chr12 + 2977 1 novel_in_catalog WNK1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA B coding 102 306 12 317 PB.6047.4 chr10 - 3405 10 novel_not_in_catalog CACUL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 600 None 4 19 1 TRUE 0 0 NA C coding 369 1107 234 1340 PB.609.2 chr1 - 2910 12 novel_in_catalog GDAP2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 162 None 2 7 0 FALSE 0 0 NA C coding 416 1248 230 1477 PB.6047.3 chr10 - 5984 11 novel_not_in_catalog CACUL1 novel NA NA NA NA no_subtype TRUE canonical NA NA 640 None 6 36 1 TRUE 0 0 NA C coding 369 1107 274 1380 PB.10566.1 chr21 - 3905 20 novel_not_in_catalog BRWD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 150 None 2 1 0 TRUE 0 0 NA B coding 1247 3741 163 3903 PB.1016.2 chr1 + 3800 20 full-splice_match CR2 ENST00000367057.7 4240 20 102 338 no_subtype FALSE canonical NA NA 3384 None 83 10 1 FALSE 0 0 NA C coding 1092 3276 88 3363 PB.10566.3 chr21 - 2795 24 novel_not_in_catalog BRWD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 126 None 9 1 0 TRUE 0 0 NA B coding 906 2718 78 2795 PB.9454.3 chr17 - 3044 9 novel_not_in_catalog C17orf62 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 61 None 2 18 3 TRUE 0 0 NA B coding 176 528 1766 2293 PB.9106.2 chr17 + 3293 8 incomplete-splice_match MSL1 ENST00000398532.8 4707 9 1283 131 internal_fragment FALSE canonical NA NA 786 None 2 18 1 FALSE 0 0 NA A coding 184 552 323 874 PB.9454.1 chr17 - 1835 9 novel_not_in_catalog C17orf62 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 73 None 42 5 1 TRUE 0 0 NA B coding 187 561 112 672 PB.3699.2 chr5 + 2924 2 novel_not_in_catalog CNOT6 novel NA NA NA NA no_subtype FALSE canonical NA NA 2027 None 2 19 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.3699.1 chr5 + 2948 2 incomplete-splice_match CNOT6 ENST00000261951.8 6176 12 1695 1533 internal_fragment FALSE canonical NA NA 115 None 2 12 0 FALSE 0 0 NA B coding 81 243 83 325 PB.10913.1 chrX - 2101 5 full-splice_match DYNLT3 ENST00000378578.8 2217 5 112 4 no_subtype FALSE canonical NA NA 45 None 2 11 0 FALSE 0 0 NA A coding 116 348 16 363 PB.5545.3 chr9 + 7795 58 novel_not_in_catalog SPTAN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 7346 None 3 3 1 TRUE 0 0 NA B coding 1575 4725 113 4837 PB.3839.1 chr6 - 2195 7 full-splice_match AGPAT1 ENST00000375107.7 2234 7 36 3 no_subtype FALSE canonical NA NA 273 None 3 7 0 FALSE 0 0 NA A coding 283 849 283 1131 PB.7617.8 chr14 - 4314 18 full-splice_match ACIN1 ENST00000457657.5 4815 18 495 6 no_subtype FALSE canonical NA NA 145 None 6 4 0 FALSE 0 0 NA C coding 1243 3729 8 3736 PB.7617.9 chr14 - 2466 7 novel_not_in_catalog ACIN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1183 None 2 10 0 TRUE 0 0 NA C coding 152 456 1460 1915 PB.5746.1 chr10 - 2656 4 novel_in_catalog ZNF248 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 128 None 3 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3693.4 chr5 + 2075 15 full-splice_match CANX ENST00000247461.8 4260 15 110 2075 no_subtype FALSE canonical NA NA 1815 None 2 2 0 FALSE 0 0 NA C coding 592 1776 91 1866 PB.7617.2 chr14 - 1031 3 full-splice_match PSMB5 ENST00000361611.10 1294 3 252 11 no_subtype FALSE canonical NA NA 210 None 5 1 0 FALSE 0 0 NA A coding 263 789 13 801 PB.5345.9 chr9 - 2015 17 novel_not_in_catalog HNRNPK novel NA NA NA NA no_subtype FALSE canonical NA NA 77 None 5 3 0 FALSE 0 0 NA C coding 463 1389 185 1573 PB.7617.4 chr14 - 4447 19 full-splice_match ACIN1 ENST00000605057.5 4474 19 25 2 no_subtype FALSE canonical NA NA 154 None 5 5 0 FALSE 0 0 NA C coding 1283 3849 17 3865 PB.2491.2 chr3 + 2752 23 full-splice_match ARMC8 ENST00000481646.5 3043 23 279 12 no_subtype FALSE canonical NA NA 2073 None 13 3 0 FALSE 0 0 NA C coding 659 1977 128 2104 PB.7617.6 chr14 - 2520 13 full-splice_match ACIN1 ENST00000357481.6 2563 13 41 2 no_subtype FALSE canonical NA NA 150 None 2 3 0 FALSE 0 0 NA C coding 583 1749 190 1938 PB.7617.7 chr14 - 3257 10 novel_not_in_catalog ACIN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1181 None 2 12 1 FALSE 0 0 NA C coding 189 567 2109 2675 PB.2471.8 chr3 - 3619 3 genic RP11-517B11.7 novel NA NA NA NA no_subtype TRUE canonical NA NA 3074 None 2 27 2 FALSE 0 0 NA A coding 124 372 1507 1878 PB.2455.1 chr3 - 3297 6 novel_in_catalog GATA2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 221 None 2 23 0 FALSE 0 0 NA A coding 480 1440 267 1706 PB.2225.1 chr3 - 1565 15 full-splice_match RRP9 ENST00000232888.6 1578 15 5 8 no_subtype FALSE canonical NA NA 156 None 14 3 0 FALSE 0 0 NA A coding 475 1425 70 1494 PB.7483.1 chr13 + 4738 27 full-splice_match RB1 ENST00000267163.4 4840 27 -5 107 no_subtype FALSE canonical NA NA 2856 None 5 7 0 FALSE 0 0 NA A coding 928 2784 144 2927 PB.9267.1 chr17 - 2703 4 full-splice_match SKA2 ENST00000330137.11 2798 4 87 8 no_subtype FALSE canonical NA NA 52 None 7 10 0 FALSE 0 0 NA A coding 121 363 20 382 PB.7951.2 chr14 - 2610 14 novel_not_in_catalog AKT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 99 None 2 14 0 FALSE 0 0 NA A coding 480 1440 179 1618 PB.2471.5 chr3 - 1541 13 novel_not_in_catalog MRPL3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 123 None 3 6 0 TRUE 0 0 NA B coding 348 1044 32 1075 PB.10078.1 chr19 + 1931 9 novel_not_in_catalog SAE1 novel NA NA NA NA no_subtype FALSE canonical NA NA 906 None 2 5 0 FALSE 0 0 NA C coding 282 846 151 996 PB.10078.2 chr19 + 1991 9 full-splice_match SAE1 ENST00000270225.11 2049 9 56 2 no_subtype FALSE canonical NA NA 960 None 31 4 0 FALSE 0 0 NA C coding 346 1038 13 1050 PB.10078.3 chr19 + 1930 9 novel_not_in_catalog SAE1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 902 None 2 7 2 TRUE 0 0 NA C coding 296 888 13 900 PB.5285.3 chr9 + 1622 8 novel_in_catalog CREB3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 854 None 2 7 0 FALSE 0 0 NA C coding 444 1332 159 1490 PB.5285.2 chr9 + 1354 9 full-splice_match CREB3 ENST00000353704.2 1832 9 331 147 no_subtype FALSE canonical NA NA 888 None 28 2 0 FALSE 0 0 NA C coding 371 1113 108 1220 PB.5285.1 chr9 + 1623 9 novel_not_in_catalog CREB3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1003 None 2 4 0 FALSE 0 0 NA C coding 423 1269 223 1491 PB.6393.1 chr11 - 847 5 full-splice_match PLA2G16 ENST00000415826.1 1099 5 -52 304 no_subtype FALSE canonical NA NA 137 None 2 4 0 FALSE 0 0 NA A coding 162 486 192 677 PB.289.1 chr1 + 2122 14 full-splice_match MFSD2A ENST00000372811.9 2154 14 15 17 no_subtype FALSE canonical NA NA 1677 None 2 4 0 FALSE 0 0 NA C coding 530 1590 149 1738 PB.2671.1 chr3 - 2887 1 intergenic novelGene_1360 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.289.2 chr1 + 2052 14 novel_in_catalog MFSD2A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1671 None 2 2 0 FALSE 0 0 NA C coding 528 1584 149 1732 PB.3410.1 chr5 + 2569 8 full-splice_match SLC25A46 ENST00000355943.7 2385 8 64 -248 no_subtype FALSE canonical NA NA 740 None 19 17 1 FALSE 0 0 NA A coding 418 1254 63 1316 PB.7959.228 chr14 - 1536 10 fusion IGHV4-4,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 19 15 4 TRUE 0 0 NA B coding 196 588 817 1404 PB.5389.1 chr9 - 1336 9 novel_not_in_catalog CTSV novel NA NA NA NA no_subtype FALSE canonical NA NA 45 None 2 0 0 TRUE 0 0 NA A coding 334 1002 56 1057 PB.6186.1 chr11 + 1503 5 full-splice_match RPL27A ENST00000314138.10 4916 5 381 3032 no_subtype FALSE canonical NA NA 340 None 23 10 0 FALSE 0 0 NA A coding 148 444 23 466 PB.4921.1 chr8 + 2753 5 full-splice_match MRPL15 ENST00000260102.8 1147 5 71 -1677 no_subtype FALSE canonical NA NA 556 None 14 15 0 FALSE 0 0 NA A coding 296 888 4 891 PB.5754.1 chr10 - 3832 13 novel_not_in_catalog RASGEF1A novel NA NA NA NA no_subtype FALSE canonical NA NA 672 None 2 20 0 FALSE 0 0 NA A coding 481 1443 679 2121 PB.8314.1 chr15 - 2956 1 genic_intron novelGene_859 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7321.1 chr12 + 3439 10 full-splice_match HNF1A ENST00000257555.10 3442 10 0 3 no_subtype FALSE canonical NA NA 1994 None 8 9 0 FALSE 0 0 NA A coding 631 1893 227 2119 PB.5841.1 chr10 - 2731 16 novel_not_in_catalog P4HA1 novel NA NA NA NA no_subtype TRUE canonical NA NA 97 None 9 7 0 FALSE 0 0 NA C coding 534 1602 130 1731 PB.1576.1 chr2 - 3046 11 incomplete-splice_match MAP3K2 ENST00000344908.9 2135 16 544 -1455 5prime_fragment FALSE canonical NA NA 22 None 4 17 0 FALSE 0 0 NA A coding 423 1269 145 1413 PB.5841.3 chr10 - 2730 15 full-splice_match P4HA1 ENST00000394890.6 2844 15 112 2 no_subtype FALSE canonical NA NA 97 None 10 7 1 FALSE 0 0 NA C coding 534 1602 130 1731 PB.5841.2 chr10 - 2704 16 novel_not_in_catalog P4HA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 7 6 0 FALSE 0 0 NA C coding 534 1602 104 1705 PB.10445.1 chr20 + 3038 1 full-splice_match MOCS3 ENST00000244051.2 5106 1 -8 2076 no_subtype FALSE canonical NA NA NA None 7 17 0 FALSE 0 0 NA A coding 460 1380 26 1405 PB.9761.1 chr19 + 2863 16 novel_not_in_catalog PDE4A novel NA NA NA NA no_subtype TRUE canonical NA NA 1857 None 2 6 0 TRUE 0 0 NA B coding 860 2580 10 2589 PB.9761.2 chr19 - 1881 2 antisense novelGene_PDE4A_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 21 None 3 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2511.2 chr3 + 2675 25 novel_in_catalog U2SURP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2568 None 2 0 0 FALSE 0 0 NA B coding 882 2646 28 2673 PB.5299.1 chr9 + 1266 10 novel_not_in_catalog GRHPR novel NA NA NA NA no_subtype FALSE canonical NA NA 1125 None 5 2 0 TRUE 0 0 NA B coding 328 984 96 1079 PB.5299.2 chr9 + 5704 5 novel_not_in_catalog GRHPR novel NA NA NA NA no_subtype FALSE canonical NA NA 5567 None 2 41 1 TRUE 0 0 NA B coding 252 756 3628 4383 PB.602.1 chr1 + 1783 5 full-splice_match CD2 ENST00000369478.3 1609 5 82 -256 no_subtype FALSE canonical NA NA 762 None 65 1 0 FALSE 0 0 NA A coding 351 1053 27 1079 PB.3992.10 chr6 - 1599 8 novel_not_in_catalog EEF1A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 33 None 4 1 1 TRUE 0 0 NA C coding 416 1248 64 1311 PB.3992.11 chr6 - 1408 7 novel_not_in_catalog EEF1A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 32 None 3 1 1 TRUE 0 0 NA C coding 169 507 614 1120 PB.3992.12 chr6 - 2074 8 novel_in_catalog EEF1A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 370 None 4 3 0 FALSE 0 0 NA C coding 462 1386 401 1786 PB.3992.13 chr6 - 1614 8 novel_not_in_catalog EEF1A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 33 None 3 0 0 TRUE 0 0 NA C coding 421 1263 64 1326 PB.1866.1 chr2 + 1887 9 full-splice_match CYP27A1 ENST00000258415.8 2286 9 391 8 no_subtype FALSE canonical NA NA 1512 None 32 2 0 FALSE 0 0 NA A coding 531 1593 37 1629 PB.334.1 chr1 - 1552 13 novel_not_in_catalog EIF2B3 novel NA NA NA NA no_subtype FALSE canonical NA NA 82 None 11 0 0 TRUE 0 0 NA A coding 452 1356 92 1447 PB.943.2 chr1 - 3474 25 novel_not_in_catalog DENND1B novel NA NA NA NA no_subtype FALSE canonical NA NA 347 None 2 8 0 TRUE 0 0 NA B coding 574 1722 934 2655 PB.9966.1 chr19 + 6488 18 novel_not_in_catalog SIPA1L3 novel NA NA NA NA no_subtype TRUE canonical NA NA 4976 None 2 12 0 TRUE 0 0 NA A coding 1644 4932 381 5312 PB.10948.1 chrX + 1730 13 full-splice_match FTSJ1 ENST00000348411.2 1892 13 156 6 no_subtype FALSE canonical NA NA 1166 None 2 1 0 FALSE 0 0 NA A coding 329 987 168 1154 PB.9087.7 chr17 + 2327 1 incomplete-splice_match LASP1 ENST00000433206.6 4023 6 1693 4 no_subtype FALSE canonical NA NA NA None 12 11 0 FALSE 0 0 NA C coding 64 192 173 364 PB.9087.5 chr17 + 2482 2 genic_intron novelGene_389 novel NA NA NA NA no_subtype TRUE canonical NA NA 2399 None 3 13 0 FALSE 0 0 NA A coding 119 357 880 1236 PB.7633.1 chr14 - 2053 6 full-splice_match TINF2 ENST00000399423.8 2168 6 108 7 no_subtype TRUE canonical NA NA 415 None 6 5 0 FALSE 0 0 NA A coding 354 1062 224 1285 PB.9087.3 chr17 + 1529 3 genic_intron novelGene_386 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 624 None 3 7 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9087.1 chr17 + 3818 7 full-splice_match LASP1 ENST00000318008.10 4109 7 285 6 no_subtype FALSE canonical NA NA 658 None 164 15 0 FALSE 0 0 NA C coding 261 783 47 829 PB.3292.1 chr5 + 4095 12 novel_not_in_catalog PPWD1 novel NA NA NA NA no_subtype TRUE canonical NA NA 3975 None 2 23 1 TRUE 0 0 NA A coding 646 1938 10 1947 PB.9352.1 chr17 + 3391 10 full-splice_match TMEM104 ENST00000335464.9 4745 10 41 1313 no_subtype FALSE canonical NA NA 851 None 4 8 0 FALSE 0 0 NA A coding 496 1488 122 1609 PB.7876.1 chr14 + 6816 3 antisense novelGene_ITPK1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 6614 None 2 44 0 FALSE 0 0 NA A coding 143 429 1321 1749 PB.1778.2 chr2 + 1916 5 full-splice_match COQ10B ENST00000263960.6 2239 5 131 192 no_subtype FALSE canonical NA NA 556 None 7 12 0 FALSE 0 0 NA C coding 238 714 8 721 PB.4390.1 chr7 - 881 8 full-splice_match PSMA2 ENST00000223321.8 1487 8 49 557 no_subtype FALSE canonical NA NA 57 None 22 1 1 FALSE 0 0 NA A coding 234 702 17 718 PB.1778.1 chr2 + 1904 1 novel_in_catalog COQ10B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 10 0 FALSE 0 0 NA C coding 94 282 56 337 PB.990.1 chr1 - 1404 3 antisense novelGene_NFASC_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 371 None 11 6 0 FALSE 0 0 NA A coding 207 621 267 887 PB.811.1 chr1 + 3543 4 genic FCGR2B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3387 None 2 15 0 TRUE 0 0 NA A coding 78 234 62 295 PB.1357.1 chr2 - 2380 2 antisense novelGene_RP11-373L24.1_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 2233 None 2 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6273.2 chr11 + 3099 1 genic_intron novelGene_344 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A coding 102 306 693 998 PB.261.1 chr1 + 3423 5 novel_not_in_catalog THRAP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2604 None 2 20 1 TRUE 0 0 NA A coding 321 963 1170 2132 PB.8334.1 chr15 - 2071 7 full-splice_match SNRPA1 ENST00000558036.5 2108 7 36 1 no_subtype FALSE canonical NA NA 150 None 2 3 0 FALSE 0 0 NA C coding 175 525 69 593 PB.8934.3 chr17 - 2941 24 full-splice_match ELAC2 ENST00000338034.8 3148 24 199 8 no_subtype FALSE canonical NA NA 286 None 19 6 0 FALSE 0 0 NA C coding 811 2433 87 2519 PB.1718.2 chr2 - 2844 5 full-splice_match NFE2L2 ENST00000397063.8 2651 5 -295 102 no_subtype FALSE canonical NA NA 693 None 6 8 0 FALSE 0 0 NA C coding 589 1767 697 2463 PB.8334.2 chr15 - 2736 6 novel_in_catalog SNRPA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 150 None 2 8 0 FALSE 0 0 NA C coding 175 525 69 593 PB.2495.1 chr3 + 2770 9 novel_not_in_catalog MRPS22 novel NA NA NA NA no_subtype FALSE canonical NA NA 2479 None 3 12 1 TRUE 0 0 NA A coding 360 1080 27 1106 PB.5291.1 chr9 + 1033 8 novel_not_in_catalog CLTA novel NA NA NA NA no_subtype TRUE canonical NA NA 593 None 18 2 0 TRUE 0 0 NA B coding 218 654 95 748 PB.5291.2 chr9 + 1956 1 novel_in_catalog CLTA novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6038.5 chr10 - 3838 17 novel_in_catalog ABLIM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 165 None 16 16 1 FALSE 0 0 NA B coding 427 1281 220 1500 PB.11089.3 chrX + 2655 3 novel_not_in_catalog ARMCX5 novel NA NA NA NA no_subtype FALSE canonical NA NA 381 None 2 3 0 FALSE 0 0 NA B coding 558 1674 644 2317 PB.2298.1 chr3 + 2072 10 full-splice_match MITF ENST00000352241.8 4814 10 49 2693 no_subtype FALSE canonical NA NA 1275 None 2 1 0 FALSE 0 0 NA A coding 520 1560 115 1674 PB.11089.1 chrX + 2933 4 novel_in_catalog ARMCX5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 662 None 2 8 0 FALSE 0 0 NA B coding 558 1674 925 2598 PB.3000.2 chr4 + 1023 4 full-splice_match OSTC ENST00000361564.8 1077 4 48 6 no_subtype FALSE canonical NA NA 455 None 5 2 0 FALSE 0 0 NA A coding 149 447 25 471 PB.8934.1 chr17 - 3684 25 novel_not_in_catalog ELAC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 286 None 18 19 1 TRUE 0 0 NA C coding 811 2433 87 2519 PB.10685.3 chr22 - 3098 8 novel_not_in_catalog RHBDD3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 233 None 4 9 0 TRUE 0 0 NA B coding 389 1167 1745 2911 PB.8297.1 chr15 + 1631 8 novel_not_in_catalog BLM novel NA NA NA NA no_subtype TRUE canonical NA NA 1319 None 3 1 0 TRUE 0 0 NA B coding 510 1530 100 1629 PB.2038.6 chr3 - 2817 10 novel_not_in_catalog RFTN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 3 9 0 FALSE 0 0 NA B coding 578 1734 112 1845 PB.2038.7 chr3 - 2785 10 novel_not_in_catalog RFTN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 83 None 2 7 1 TRUE 0 0 NA B coding 302 906 910 1815 PB.2038.1 chr3 - 2781 11 novel_not_in_catalog RFTN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 26 None 3 6 1 TRUE 0 0 NA B coding 578 1734 65 1798 PB.10940.2 chrX + 3077 21 novel_in_catalog USP11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2545 None 3 5 0 FALSE 0 0 NA C coding 690 2070 611 2680 PB.2038.3 chr3 - 2849 10 novel_in_catalog RFTN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 137 None 7 6 0 FALSE 0 0 NA B coding 578 1734 146 1879 PB.142.1 chr1 + 2365 4 novel_not_in_catalog PNRC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1998 None 3 15 0 TRUE 0 0 NA C coding 139 417 403 819 PB.3060.1 chr4 - 2776 22 novel_not_in_catalog INPP4B novel NA NA NA NA no_subtype FALSE canonical NA NA 220 None 12 1 1 TRUE 0 0 NA A coding 739 2217 521 2737 PB.634.3 chr1 + 2882 22 novel_in_catalog CHD1L novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2553 None 4 3 0 FALSE 0 0 NA C coding 470 1410 1220 2629 PB.142.2 chr1 + 2363 3 full-splice_match PNRC2 ENST00000334351.7 2416 3 22 31 no_subtype FALSE canonical NA NA 371 None 2 15 0 FALSE 0 0 NA C coding 139 417 390 806 PB.5271.1 chr9 + 3606 1 novel_in_catalog GALT novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA C coding 179 537 2852 3388 PB.5486.1 chr9 - 4109 3 antisense novelGene_TLK1P1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 119 None 2 27 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.8995.1 chr17 + 1627 6 full-splice_match TMEM199 ENST00000292114.7 3148 6 81 1440 no_subtype FALSE canonical NA NA 540 None 10 5 0 FALSE 0 0 NA C coding 208 624 10 633 PB.8995.2 chr17 + 1519 5 novel_in_catalog TMEM199 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 440 None 2 6 0 FALSE 0 0 NA C coding 222 666 23 688 PB.8995.3 chr17 + 1436 6 novel_not_in_catalog TMEM199 novel NA NA NA NA no_subtype FALSE canonical NA NA 540 None 2 7 0 FALSE 0 0 NA C coding 200 600 10 609 PB.7427.1 chr13 - 1593 3 genic_intron novelGene_319 novel NA NA NA NA no_subtype FALSE canonical NA NA 423 None 3 13 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.3827.2 chr6 - 2575 21 full-splice_match SLC44A4 ENST00000229729.10 2589 21 3 11 no_subtype FALSE non_canonical NA NA 58 None 6 2 0 FALSE 0 0 NA A coding 710 2130 19 2148 PB.3531.1 chr5 - 1348 2 full-splice_match CD14 ENST00000302014.10 1886 2 526 12 no_subtype FALSE canonical NA NA 107 None 107 0 0 FALSE 0 0 NA A coding 375 1125 105 1229 PB.7475.10 chr13 - 2742 15 novel_not_in_catalog KIAA0226L novel NA NA NA NA no_subtype FALSE canonical NA NA 133 None 2 11 0 FALSE 0 0 NA B coding 647 1941 256 2196 PB.7475.11 chr13 - 1713 11 novel_not_in_catalog KIAA0226L novel NA NA NA NA no_subtype FALSE canonical NA NA 135 None 5 4 0 FALSE 0 0 NA B coding 275 825 471 1295 PB.7475.12 chr13 - 2506 9 novel_not_in_catalog KIAA0226L novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 5 6 0 FALSE 0 0 NA B coding 447 1341 226 1566 PB.7475.14 chr13 - 2516 9 novel_not_in_catalog KIAA0226L novel NA NA NA NA no_subtype FALSE canonical NA NA 111 None 2 4 0 FALSE 0 0 NA B coding 447 1341 234 1574 PB.5763.1 chr10 + 2508 14 full-splice_match ALOX5 ENST00000374391.6 2506 14 -5 3 no_subtype FALSE canonical NA NA 1903 None 18 0 0 FALSE 0 0 NA A coding 674 2022 59 2080 PB.10467.4 chr20 + 3038 15 novel_not_in_catalog NELFCD novel NA NA NA NA no_subtype FALSE canonical NA NA 2566 None 4 6 0 TRUE 0 0 NA B coding 500 1500 1099 2598 PB.10467.5 chr20 + 3270 4 full-splice_match TUBB1 ENST00000217133.1 3496 4 170 56 no_subtype FALSE canonical NA NA 376 None 10 6 0 FALSE 0 0 NA A coding 451 1353 100 1452 PB.613.3 chr1 - 5776 8 incomplete-splice_match NOTCH2 ENST00000256646.6 11389 34 5102 511 5prime_fragment FALSE canonical NA NA 120 None 5 15 0 FALSE 0 0 NA B coding 773 2319 213 2531 PB.9529.2 chr18 + 3095 21 novel_not_in_catalog DTNA novel NA NA NA NA no_subtype TRUE canonical NA NA 2327 None 4 1 0 TRUE 0 0 NA B coding 713 2139 327 2465 PB.10467.1 chr20 + 2216 16 novel_not_in_catalog NELFCD novel NA NA NA NA no_subtype FALSE canonical NA NA 1745 None 15 2 0 TRUE 0 0 NA B coding 590 1770 8 1777 PB.7608.40 chr14 + 1452 7 fusion TRAV26-1,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 903 None 2 6 1 TRUE 0 0 NA B coding 110 330 95 424 PB.9529.1 chr18 + 3483 4 novel_not_in_catalog DTNA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1716 None 2 17 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.2877.1 chr4 + 2973 1 incomplete-splice_match PARM1 ENST00000513238.5 4308 3 1331 5 no_subtype FALSE canonical NA NA NA None 5 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.848.1 chr1 + 1506 7 novel_not_in_catalog TIPRL novel NA NA NA NA no_subtype FALSE canonical NA NA 808 None 3 3 1 FALSE 0 0 NA A coding 235 705 133 837 PB.3390.3 chr5 + 3608 18 novel_in_catalog ERAP2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2732 None 3 9 0 FALSE 0 0 NA C coding 674 2022 169 2190 PB.6350.3 chr11 + 2760 7 novel_not_in_catalog MS4A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 956 None 7 10 2 FALSE 0 0 NA B coding 149 447 726 1172 PB.1064.1 chr1 - 2749 10 full-splice_match AIDA ENST00000340020.10 3008 10 86 173 no_subtype FALSE canonical NA NA 231 None 47 4 0 FALSE 0 0 NA A coding 306 918 122 1039 PB.8038.1 chr15 + 2759 2 antisense novelGene_LCMT2_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 264 None 4 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8622.1 chr16 + 1877 13 full-splice_match OGFOD1 ENST00000566157.5 4647 13 95 2675 no_subtype FALSE canonical NA NA 1495 None 4 3 0 FALSE 0 0 NA A coding 542 1626 29 1654 PB.6350.2 chr11 + 2600 7 novel_not_in_catalog MS4A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 795 None 3 12 2 TRUE 0 0 NA B coding 149 447 565 1011 PB.6506.20 chr11 - 5795 20 novel_not_in_catalog NUMA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 151 None 4 5 0 TRUE 0 0 NA B coding 1763 5289 189 5477 PB.3711.1 chr6 - 1627 7 full-splice_match SERPINB9 ENST00000380698.4 4118 7 -29 2520 no_subtype FALSE canonical NA NA 109 None 24 2 1 FALSE 0 0 NA A coding 376 1128 120 1247 PB.7160.1 chr12 + 4600 6 full-splice_match MRPL42 ENST00000549982.5 15582 6 34 10948 no_subtype FALSE canonical NA NA 510 None 40 38 0 FALSE 0 0 NA A coding 142 426 128 553 PB.1347.1 chr2 - 1674 14 full-splice_match FANCL ENST00000233741.8 1683 14 7 2 no_subtype FALSE canonical NA NA 126 None 2 4 0 FALSE 0 0 NA C coding 375 1125 31 1155 PB.1347.2 chr2 - 3148 1 novel_in_catalog FANCL novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10351.9 chr20 - 3570 3 full-splice_match RBM12 ENST00000374114.7 6662 3 -14 3106 no_subtype FALSE canonical NA NA 171 None 18 4 0 FALSE 0 0 NA C coding 932 2796 279 3074 PB.6959.3 chr12 + 2986 11 novel_not_in_catalog TMBIM6 novel NA NA NA NA no_subtype FALSE canonical NA NA 926 None 5 16 0 FALSE 0 0 NA C coding 237 711 237 947 PB.6350.7 chr11 - 2751 3 antisense novelGene_MS4A1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 212 None 3 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.11204.1 chrX + 2585 4 genic_intron novelGene_1256 novel NA NA NA NA no_subtype TRUE canonical NA NA 2468 None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8214.1 chr15 + 1579 1 full-splice_match RP11-817O13.8 ENST00000563278.1 1430 1 1227 -1376 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10351.2 chr20 - 1934 16 novel_in_catalog CPNE1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 133 None 23 2 0 FALSE 0 0 NA B coding 537 1611 134 1744 PB.10351.4 chr20 - 1969 17 novel_not_in_catalog CPNE1 novel NA NA NA NA no_subtype TRUE canonical NA NA 33 None 4 3 1 TRUE 0 0 NA B coding 582 1746 29 1774 PB.4743.1 chr7 + 3053 3 antisense novelGene_GIMAP6_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1771 None 3 10 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.10351.7 chr20 - 2786 3 novel_not_in_catalog CPNE1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 300 None 2 9 0 TRUE 0 0 NA B coding 119 357 1960 2316 PB.10735.8 chr22 + 748 1 incomplete-splice_match CSF2RB ENST00000262825.9 4087 15 3336 4 no_subtype FALSE canonical NA NA NA None 7 3 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10869.1 chrX - 814 1 full-splice_match GPX1P1 ENST00000388829.3 606 1 -13 -195 no_subtype FALSE canonical NA NA NA None 14 2 0 FALSE 0 0 NA A coding 103 309 182 490 PB.8103.1 chr15 - 1670 5 intergenic novelGene_546 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1349 None 8 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7276.1 chr12 + 3595 7 novel_in_catalog DTX1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2286 None 2 17 1 FALSE 0 0 NA A coding 285 855 1654 2508 PB.8103.2 chr15 - 1642 5 intergenic novelGene_546 novel NA NA NA NA no_subtype TRUE canonical NA NA 1347 None 2 10 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.3676.2 chr5 - 1701 13 full-splice_match PDLIM7 ENST00000355841.6 1689 13 -18 6 no_subtype FALSE canonical NA NA 74 None 25 12 1 FALSE 0 0 NA C coding 457 1371 86 1456 PB.3837.1 chr6 - 1372 2 full-splice_match FKBPL ENST00000375156.3 1345 2 -35 8 no_subtype FALSE canonical NA NA 232 None 3 1 0 FALSE 0 0 NA A coding 349 1047 307 1353 PB.9137.1 chr17 + 1815 2 genic_intron novelGene_420 novel NA NA NA NA no_subtype FALSE canonical NA NA 113 None 3 11 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3806.1 chr6 - 5491 2 antisense novelGene_NFKBIL1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 37 None 2 42 0 FALSE 0 0 NA A coding 141 423 4216 4638 PB.3390.1 chr5 + 3166 19 full-splice_match ERAP2 ENST00000437043.7 5705 19 561 1978 no_subtype FALSE canonical NA NA 2889 None 9 5 0 FALSE 0 0 NA C coding 954 2862 169 3030 PB.7355.1 chr12 + 1617 13 incomplete-splice_match DDX55 ENST00000238146.8 2654 14 8 1029 3prime_fragment FALSE canonical NA NA 1375 None 2 0 0 FALSE 0 0 NA A coding 525 1575 43 1617 PB.2697.2 chr3 + 2784 21 novel_not_in_catalog LRCH3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2736 None 2 6 1 TRUE 0 0 NA A coding 735 2205 15 2219 PB.4595.1 chr7 + 2657 10 novel_in_catalog HBP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1543 None 113 5 0 FALSE 0 0 NA C coding 514 1542 17 1558 PB.3958.1 chr6 - 2781 5 incomplete-splice_match TNFRSF21 ENST00000296861.2 3595 6 812 2 5prime_fragment FALSE canonical NA NA 330 None 2 5 0 FALSE 0 0 NA A coding 472 1416 132 1547 PB.1508.1 chr2 - 5522 2 genic_intron novelGene_907 novel NA NA NA NA no_subtype FALSE canonical NA NA 5231 None 2 43 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.43.2 chr1 + 1615 11 novel_not_in_catalog CA6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1139 None 38 5 1 TRUE 0 0 NA B coding 317 951 94 1044 PB.8358.1 chr16 - 1751 10 novel_not_in_catalog LMF1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 193 None 2 4 1 FALSE 0 0 NA A coding 350 1050 652 1701 PB.43.1 chr1 + 1620 11 novel_not_in_catalog CA6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1158 None 31 5 1 TRUE 0 0 NA B coding 317 951 113 1063 PB.3057.2 chr4 + 1811 4 full-splice_match SCOC ENST00000394201.8 1795 4 6 -22 no_subtype FALSE canonical NA NA 225 None 4 7 0 FALSE 0 0 NA C coding 82 246 120 365 PB.3676.1 chr5 - 1605 12 novel_not_in_catalog PDLIM7 novel NA NA NA NA no_subtype FALSE canonical NA NA 74 None 2 6 0 FALSE 0 0 NA C coding 423 1269 86 1354 PB.10814.1 chr22 - 2930 14 full-splice_match TTLL12 ENST00000216129.6 3385 14 42 413 no_subtype FALSE canonical NA NA 199 None 19 4 0 FALSE 0 0 NA A coding 644 1932 23 1954 PB.1972.1 chr3 + 2031 2 novel_in_catalog SETMAR novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 138 None 2 8 0 FALSE 0 0 NA A coding 383 1149 22 1170 PB.5471.5 chr9 + 2628 1 intergenic novelGene_1036 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5471.1 chr9 + 2890 3 full-splice_match TLR4 ENST00000355622.6 4844 3 119 1835 no_subtype FALSE canonical NA NA 242 None 66 2 0 FALSE 0 0 NA C coding 825 2475 25 2499 PB.5471.3 chr9 + 5484 4 full-splice_match TLR4 ENST00000394487.4 3908 4 112 -1688 no_subtype FALSE canonical NA NA 409 None 9 20 1 FALSE 0 0 NA C coding 799 2397 270 2666 PB.3859.4 chr6 - 1547 2 novel_not_in_catalog NUDT3 novel NA NA NA NA no_subtype TRUE canonical NA NA 660 None 7 7 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.3859.5 chr6 - 1454 1 incomplete-splice_match NUDT3 ENST00000607016.1 9905 5 1321 7131 no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA C coding 99 297 494 790 PB.3859.6 chr6 - 1210 5 full-splice_match NUDT3 ENST00000607016.1 9905 5 18 8677 no_subtype FALSE canonical NA NA 393 None 10 3 0 FALSE 0 0 NA C coding 172 516 295 810 PB.9994.5 chr19 + 1553 10 full-splice_match PSMC4 ENST00000593455.5 1532 10 -5 -16 no_subtype FALSE canonical NA NA 1320 None 5 2 0 FALSE 0 0 NA C coding 318 954 39 992 PB.9994.2 chr19 + 1469 11 novel_not_in_catalog PSMC4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1227 None 3 2 1 FALSE 0 0 NA C coding 338 1014 57 1070 PB.9994.3 chr19 + 1502 11 novel_not_in_catalog PSMC4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1262 None 3 8 1 TRUE 0 0 NA C coding 319 957 39 995 PB.3859.2 chr6 - 3154 1 incomplete-splice_match NUDT3 ENST00000607016.1 9905 5 6747 5 no_subtype FALSE canonical NA NA NA None 4 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9626.1 chr19 - 1562 9 full-splice_match RNF126 ENST00000292363.9 1694 9 124 8 no_subtype TRUE canonical NA NA 107 None 8 6 0 FALSE 0 0 NA A coding 311 933 33 965 PB.10004.1 chr19 + 2095 6 full-splice_match EGLN2 ENST00000303961.8 2102 6 5 2 no_subtype FALSE canonical NA NA 1473 None 37 5 0 FALSE 0 0 NA C coding 374 1122 405 1526 PB.4731.1 chr7 - 2525 10 full-splice_match PDIA4 ENST00000286091.8 2903 10 -11 389 no_subtype FALSE canonical NA NA 332 None 302 6 0 FALSE 0 0 NA A coding 645 1935 245 2179 PB.10004.3 chr19 + 4083 7 novel_not_in_catalog EGLN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1847 None 2 14 0 TRUE 0 0 NA C coding 374 1122 374 1495 PB.10004.2 chr19 + 3335 7 novel_not_in_catalog EGLN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1879 None 4 26 0 TRUE 0 0 NA C coding 374 1122 406 1527 PB.10004.4 chr19 + 1525 5 novel_not_in_catalog EGLN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 904 None 2 5 0 FALSE 0 0 NA C coding 125 375 583 957 PB.367.1 chr1 + 3026 1 novel_in_catalog BTF3L4 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2058.2 chr3 + 1892 1 novel_in_catalog OXSM novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA B coding 132 396 1457 1852 PB.2058.1 chr3 + 1932 5 novel_not_in_catalog OXSM novel NA NA NA NA no_subtype TRUE canonical NA NA 1492 None 2 5 1 TRUE 0 0 NA B coding 459 1377 516 1892 PB.7884.1 chr14 - 2931 10 novel_not_in_catalog DDX24 novel NA NA NA NA no_subtype TRUE canonical NA NA 82 None 172 3 0 TRUE 0 0 NA A coding 859 2577 88 2664 PB.10185.1 chr19 + 1565 1 full-splice_match CTC-444N24.11 ENST00000593427.1 4258 1 -388 3081 no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6720.1 chr11 + 2745 18 full-splice_match STT3A ENST00000392708.8 4558 18 70 1743 no_subtype FALSE canonical NA NA 2168 None 55 4 0 FALSE 0 0 NA A coding 705 2115 90 2204 PB.3028.1 chr4 - 1621 13 full-splice_match ANXA5 ENST00000296511.9 1762 13 92 49 no_subtype FALSE canonical NA NA 159 None 266 3 0 FALSE 0 0 NA A coding 320 960 195 1154 PB.2000.1 chr3 - 1353 10 novel_not_in_catalog SEC13 novel NA NA NA NA no_subtype FALSE canonical NA NA 66 None 6 2 0 TRUE 0 0 NA C coding 322 966 60 1025 PB.2000.2 chr3 - 1313 9 full-splice_match SEC13 ENST00000350697.7 1425 9 106 6 no_subtype FALSE canonical NA NA 23 None 6 2 0 FALSE 0 0 NA C coding 322 966 21 986 PB.215.2 chr1 - 5791 7 novel_in_catalog SNRNP40 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 143 None 2 35 1 FALSE 0 0 NA C coding 302 906 3 908 PB.7851.4 chr14 - 2813 1 genic_intron novelGene_810 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 29 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3337.1 chr5 + 2762 2 full-splice_match F2RL1 ENST00000296677.4 2914 2 147 5 no_subtype FALSE canonical NA NA 141 None 51 8 0 FALSE 0 0 NA A coding 397 1191 60 1250 PB.215.1 chr1 - 1467 10 full-splice_match SNRNP40 ENST00000263694.8 1597 10 16 114 no_subtype FALSE canonical NA NA 144 None 47 4 0 FALSE 0 0 NA C coding 357 1071 4 1074 PB.10909.1 chrX - 639 1 genic_intron novelGene_296 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2383.4 chr3 + 2847 14 novel_in_catalog ATP6V1A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1776 None 5 6 0 FALSE 0 0 NA C coding 617 1851 16 1866 PB.10718.9 chr22 + 1515 8 novel_in_catalog FBXO7 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 850 None 2 4 0 FALSE 0 0 NA C coding 366 1098 137 1234 PB.10718.8 chr22 + 1624 10 novel_not_in_catalog FBXO7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 948 None 2 7 1 TRUE 0 0 NA C coding 366 1098 235 1332 PB.1325.2 chr2 + 1495 9 novel_not_in_catalog EPCAM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1050 None 4 3 0 FALSE 0 0 NA C coding 298 894 196 1089 PB.2383.2 chr3 + 3171 2 novel_not_in_catalog ATP6V1A novel NA NA NA NA no_subtype FALSE canonical NA NA 1843 None 2 35 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.10718.5 chr22 + 1847 10 novel_not_in_catalog FBXO7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1163 None 33 3 0 TRUE 0 0 NA C coding 408 1224 324 1547 PB.10718.4 chr22 + 1715 10 novel_not_in_catalog FBXO7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1036 None 4 3 0 TRUE 0 0 NA C coding 443 1329 92 1420 PB.10718.7 chr22 + 1701 10 novel_not_in_catalog FBXO7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1017 None 3 7 1 TRUE 0 0 NA C coding 434 1302 100 1401 PB.10336.2 chr20 + 3138 4 novel_not_in_catalog DYNLRB1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2339 None 4 22 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.10718.1 chr22 + 1769 10 novel_not_in_catalog FBXO7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1089 None 29 3 0 TRUE 0 0 NA C coding 408 1224 250 1473 PB.1457.10 chr2 - 2664 14 novel_in_catalog IMMT novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 125 None 2 4 0 FALSE 0 0 NA B coding 753 2259 81 2339 PB.10718.3 chr22 + 1963 10 novel_not_in_catalog FBXO7 novel NA NA NA NA no_subtype TRUE canonical NA NA 1279 None 8 3 0 TRUE 0 0 NA C coding 366 1098 566 1663 PB.10718.2 chr22 + 2143 9 full-splice_match FBXO7 ENST00000266087.11 2195 9 29 23 no_subtype FALSE canonical NA NA 1480 None 2 3 0 FALSE 0 0 NA C coding 522 1566 299 1864 PB.6794.4 chr12 + 3399 6 incomplete-splice_match ATN1 ENST00000356654.8 4351 10 949 3 internal_fragment FALSE canonical NA NA 2827 None 5 6 0 FALSE 0 0 NA A coding 856 2568 291 2858 PB.6794.7 chr12 + 6009 14 novel_not_in_catalog PTPN6 novel NA NA NA NA no_subtype FALSE canonical NA NA 5821 None 4 30 3 TRUE 0 0 NA C coding 271 813 4981 5793 PB.6794.6 chr12 + 2064 16 full-splice_match PTPN6 ENST00000318974.13 2245 16 182 -1 no_subtype FALSE canonical NA NA 1875 None 64 0 0 FALSE 0 0 NA C coding 595 1785 63 1847 PB.6794.1 chr12 + 2580 11 novel_in_catalog ENO2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1615 None 2 9 0 FALSE 0 0 NA C coding 356 1068 108 1175 PB.10759.13 chr22 - 2643 11 novel_not_in_catalog DDX17 novel NA NA NA NA no_subtype FALSE canonical NA NA 349 None 2 15 0 TRUE 0 0 NA C coding 449 1347 300 1646 PB.6794.3 chr12 + 3785 17 novel_not_in_catalog PTPN6 novel NA NA NA NA no_subtype TRUE canonical NA NA 3595 None 3 8 2 TRUE 0 0 NA C coding 481 1443 2125 3567 PB.6794.2 chr12 + 3440 11 full-splice_match ENO2 ENST00000535366.5 2827 11 -614 1 no_subtype FALSE canonical NA NA 2475 None 2 12 0 FALSE 0 0 NA C coding 434 1302 1241 2542 PB.2884.1 chr4 - 1605 1 incomplete-splice_match CXCL9 ENST00000264888.5 2740 4 939 197 no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2884.3 chr4 - 2563 4 full-splice_match CXCL9 ENST00000264888.5 2740 4 -21 198 no_subtype FALSE canonical NA NA 124 None 13 3 0 FALSE 0 0 NA C coding 125 375 61 435 PB.6107.3 chr11 - 1699 11 novel_not_in_catalog SIGIRR novel NA NA NA NA no_subtype FALSE non_canonical NA NA 178 None 8 14 1 TRUE 0 0 NA C coding 396 1188 332 1519 PB.6794.8 chr12 + 2170 16 novel_not_in_catalog PTPN6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1937 None 4 0 0 FALSE 0 0 NA C coding 595 1785 125 1909 PB.6107.1 chr11 - 1612 10 full-splice_match SIGIRR ENST00000332725.7 1639 10 26 1 no_subtype TRUE canonical NA NA 47 None 7 5 0 FALSE 0 0 NA C coding 410 1230 201 1430 PB.5106.2 chr8 - 1411 13 novel_not_in_catalog ANXA13 novel NA NA NA NA no_subtype FALSE canonical NA NA 85 None 3 1 0 TRUE 0 0 NA B coding 316 948 71 1018 PB.9376.6 chr17 - 4034 33 novel_not_in_catalog UNC13D novel NA NA NA NA no_subtype FALSE canonical NA NA 170 None 8 14 2 TRUE 0 0 NA B coding 1090 3270 54 3323 PB.8040.4 chr15 + 3044 18 full-splice_match TUBGCP4 ENST00000564079.5 6798 18 37 3717 no_subtype TRUE canonical NA NA 2191 None 7 4 0 FALSE 0 0 NA C coding 666 1998 204 2201 PB.308.1 chr1 + 1679 3 full-splice_match ZNF691 ENST00000372507.5 1683 3 -5 9 no_subtype FALSE canonical NA NA 160 None 2 4 0 FALSE 0 0 NA C coding 284 852 170 1021 PB.8040.2 chr15 + 2923 18 novel_not_in_catalog TUBGCP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 2035 None 4 8 0 FALSE 0 0 NA C coding 530 1590 456 2045 PB.308.2 chr1 + 1518 1 novel_in_catalog ZNF691 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA C coding 284 852 12 863 PB.4414.1 chr7 + 3600 2 genic_intron novelGene_469 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3332 None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11062.1 chrX - 2515 2 antisense novelGene_RP11-346E8.1_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 1482 None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5493.1 chr9 - 6932 2 genic STRBP novel NA NA NA NA no_subtype FALSE canonical NA NA 2897 None 3 46 1 TRUE 0 0 NA A coding 133 399 1397 1795 PB.4853.1 chr8 + 4026 32 novel_not_in_catalog PTK2B novel NA NA NA NA no_subtype FALSE canonical NA NA 2978 None 7 8 2 TRUE 0 0 NA B coding 1009 3027 165 3191 PB.1070.2 chr1 + 3475 7 novel_not_in_catalog CAPN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2340 None 2 12 0 TRUE 0 0 NA B coding 250 750 115 864 PB.1359.1 chr2 + 1364 4 full-splice_match PEX13 ENST00000295030.5 4470 4 33 3073 no_subtype FALSE canonical NA NA 918 None 2 2 0 FALSE 0 0 NA A coding 403 1209 6 1214 PB.6048.2 chr10 - 4181 22 full-splice_match EIF3A ENST00000369144.7 6646 22 -21 2486 no_subtype FALSE canonical NA NA 198 None 11 3 0 FALSE 0 0 NA C coding 1344 4032 150 4181 PB.1185.1 chr2 + 1794 12 novel_in_catalog TAF1B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1259 None 2 5 0 FALSE 0 0 NA A coding 444 1332 80 1411 PB.5698.1 chr10 - 1661 2 novel_not_in_catalog VIM-AS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 543 None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10746.1 chr22 - 6914 2 antisense novelGene_SH3BP1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 6802 None 2 34 0 FALSE 0 0 NA A coding 128 384 2463 2846 PB.5698.3 chr10 - 3422 2 genic RP11-124N14.3 novel NA NA NA NA no_subtype FALSE canonical NA NA 527 None 2 24 1 TRUE 0 0 NA A coding 105 315 2417 2731 PB.3604.1 chr5 + 2743 1 incomplete-splice_match LARP1 ENST00000336314.8 6595 19 3845 8 no_subtype FALSE canonical NA NA NA None 8 13 0 FALSE 0 0 NA A coding 153 459 188 646 PB.1258.1 chr2 - 2752 1 novel_in_catalog MEMO1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3725.1 chr6 + 3438 1 genic_intron novelGene_52 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1258.2 chr2 - 1476 10 full-splice_match MEMO1 ENST00000404530.5 1482 10 0 6 no_subtype FALSE canonical NA NA 33 None 2 0 0 FALSE 0 0 NA C coding 297 891 51 941 PB.6978.5 chr12 - 1487 10 novel_not_in_catalog BIN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 133 None 6 0 0 FALSE 0 0 NA B coding 478 1434 53 1486 PB.6978.4 chr12 - 2182 13 novel_not_in_catalog BIN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 115 None 49 1 0 FALSE 0 0 NA B coding 563 1689 35 1723 PB.6978.6 chr12 - 1707 1 novel_in_catalog BIN2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA B coding 102 306 24 329 PB.881.5 chr1 - 4031 3 novel_in_catalog KIAA0040 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 253 None 3 19 0 FALSE 0 0 NA C coding 99 297 563 859 PB.1206.1 chr2 - 6070 20 novel_in_catalog PUM2 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 254 None 4 18 0 FALSE 0 0 NA A coding 985 2955 273 3227 PB.6926.2 chr12 + 2888 2 novel_not_in_catalog PCED1B novel NA NA NA NA no_subtype FALSE canonical NA NA 610 None 2 20 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.1070.6 chr1 + 1784 11 novel_in_catalog CAPN2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 776 None 2 4 0 FALSE 0 0 NA B coding 121 363 435 797 PB.6027.1 chr10 - 1777 11 full-splice_match ZDHHC6 ENST00000369405.7 2170 11 -30 423 no_subtype FALSE canonical NA NA 240 None 15 6 0 FALSE 0 0 NA C coding 413 1239 455 1693 PB.5483.1 chr9 - 2584 6 full-splice_match RBM18 ENST00000417201.3 4974 6 12 2378 no_subtype FALSE canonical NA NA 113 None 9 8 0 FALSE 0 0 NA A coding 190 570 130 699 PB.9827.1 chr19 + 2965 23 novel_not_in_catalog PKN1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2690 None 3 7 1 TRUE 0 0 NA B coding 942 2826 66 2891 PB.9827.3 chr19 + 3173 22 novel_not_in_catalog PKN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2891 None 5 8 0 TRUE 0 0 NA B coding 724 2172 15 2186 PB.9827.2 chr19 + 2936 23 novel_not_in_catalog PKN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2654 None 101 2 0 TRUE 0 0 NA B coding 948 2844 12 2855 PB.976.1 chr1 + 2605 2 full-splice_match BTG2 ENST00000290551.4 2712 2 98 9 no_subtype FALSE canonical NA NA 115 None 255 13 0 FALSE 0 0 NA C coding 85 255 193 447 PB.976.2 chr1 + 1495 1 incomplete-splice_match BTG2 ENST00000290551.4 2712 2 1212 6 no_subtype FALSE canonical NA NA NA None 13 5 0 FALSE 0 0 NA C coding 122 366 792 1157 PB.3540.1 chr5 + 2969 4 full-splice_match PCDHAC2 ENST00000289269.6 5963 4 499 2495 no_subtype FALSE canonical NA NA 2746 None 7 0 0 FALSE 0 0 NA A coding 978 2934 34 2967 PB.5330.1 chr9 - 1504 4 full-splice_match RFK ENST00000376736.5 2684 4 88 1092 no_subtype FALSE canonical NA NA 328 None 33 7 0 FALSE 0 0 NA A coding 155 465 247 711 PB.881.4 chr1 - 3989 4 full-splice_match KIAA0040 ENST00000423313.5 4564 4 17 558 no_subtype FALSE canonical NA NA 137 None 4 17 1 FALSE 0 0 NA C coding 99 297 521 817 PB.2277.2 chr3 + 3292 1 novel_in_catalog ATXN7 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 13 0 FALSE 0 0 NA A coding 102 306 372 677 PB.11009.1 chrX + 4277 22 novel_not_in_catalog HEPH novel NA NA NA NA no_subtype TRUE canonical NA NA 3337 None 8 3 0 FALSE 0 0 NA A coding 1161 3483 82 3564 PB.10875.1 chrX - 3514 9 novel_not_in_catalog FANCB novel NA NA NA NA no_subtype TRUE canonical NA NA 86 None 2 17 2 FALSE 0 0 NA A coding 852 2556 175 2730 PB.3188.1 chr5 + 2790 1 genic_intron novelGene_151 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8036.1 chr15 + 1432 11 full-splice_match CCNDBP1 ENST00000300213.8 3660 11 242 1986 no_subtype FALSE canonical NA NA 968 None 111 2 0 FALSE 0 0 NA A coding 360 1080 1 1080 PB.2678.12 chr3 - 2774 4 novel_not_in_catalog ACAP2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1271 None 2 31 3 TRUE 0 0 NA B non_coding NA NA NA NA PB.320.1 chr1 - 1785 6 novel_in_catalog HYI novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1304 None 2 26 1 FALSE 0 0 NA A coding 210 630 1080 1709 PB.5646.4 chr10 + 3611 14 full-splice_match ZMYND11 ENST00000381607.8 3898 14 17 270 no_subtype FALSE canonical NA NA 1602 None 3 9 0 FALSE 0 0 NA C coding 548 1644 79 1722 PB.5646.5 chr10 + 3756 15 novel_not_in_catalog ZMYND11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1747 None 5 10 1 FALSE 0 0 NA C coding 602 1806 62 1867 PB.5646.7 chr10 + 3980 14 novel_in_catalog ZMYND11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1707 None 2 9 0 FALSE 0 0 NA C coding 602 1806 22 1827 PB.4473.1 chr7 + 2644 12 novel_not_in_catalog DTX2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2025 None 15 2 0 TRUE 0 0 NA B coding 622 1866 385 2250 PB.5130.1 chr8 + 1658 5 novel_in_catalog PHF20L1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 659 None 2 5 0 FALSE 0 0 NA B coding 160 480 320 799 PB.5646.2 chr10 + 6273 12 novel_not_in_catalog ZMYND11 novel NA NA NA NA no_subtype FALSE canonical NA NA 4263 None 2 42 0 TRUE 0 0 NA C coding 360 1080 3304 4383 PB.5646.3 chr10 + 3742 15 novel_in_catalog ZMYND11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1733 None 26 8 0 FALSE 0 0 NA C coding 602 1806 48 1853 PB.1801.1 chr2 + 2233 12 full-splice_match STRADB ENST00000194530.7 2293 12 54 6 no_subtype FALSE canonical NA NA 1424 None 3 5 2 FALSE 0 0 NA C coding 418 1254 312 1565 PB.3843.1 chr6 - 2868 10 novel_not_in_catalog RXRB novel NA NA NA NA no_subtype FALSE canonical NA NA 414 None 9 9 1 FALSE 0 0 NA C coding 403 1209 261 1469 PB.3843.3 chr6 - 2641 9 novel_in_catalog RXRB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 420 None 2 11 1 FALSE 0 0 NA C coding 441 1323 226 1548 PB.3843.2 chr6 - 2889 10 full-splice_match RXRB ENST00000374685.8 2846 10 -48 5 no_subtype FALSE canonical NA NA 421 None 5 7 0 FALSE 0 0 NA C coding 510 1530 268 1797 PB.3672.7 chr5 + 1765 11 novel_not_in_catalog RGS14 novel NA NA NA NA no_subtype FALSE canonical NA NA 1042 None 2 2 0 FALSE 0 0 NA B coding 402 1206 37 1242 PB.3672.4 chr5 + 2663 15 novel_not_in_catalog RGS14 novel NA NA NA NA no_subtype FALSE canonical NA NA 1942 None 9 6 0 FALSE 0 0 NA B coding 337 1011 1132 2142 PB.3672.3 chr5 + 2324 16 novel_not_in_catalog RGS14 novel NA NA NA NA no_subtype FALSE canonical NA NA 1604 None 8 6 0 FALSE 0 0 NA B coding 567 1701 104 1804 PB.710.3 chr1 - 3427 4 novel_not_in_catalog PYGO2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 379 None 2 28 2 TRUE 0 0 NA C coding 369 1107 569 1675 PB.3672.1 chr5 + 2715 1 novel_in_catalog RGS14 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA B coding 132 396 636 1031 PB.9824.3 chr19 + 3174 20 full-splice_match ADGRE5 ENST00000242786.5 3188 20 10 4 no_subtype FALSE canonical NA NA 2548 None 178 6 0 FALSE 0 0 NA C coding 835 2505 71 2575 PB.2365.2 chr3 + 3263 17 novel_not_in_catalog CD96 novel NA NA NA NA no_subtype FALSE canonical NA NA 2987 None 2 13 1 TRUE 0 0 NA B coding 569 1707 31 1737 PB.2798.1 chr4 - 3532 1 genic_intron novelGene_381 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 15 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2798.2 chr4 - 3541 1 antisense novelGene_KLF3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 17 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1262.2 chr2 + 1945 6 full-splice_match YIPF4 ENST00000238831.8 11949 6 0 10004 no_subtype FALSE canonical NA NA 843 None 6 7 0 FALSE 0 0 NA C coding 244 732 247 978 PB.6942.3 chr12 - 3233 18 novel_not_in_catalog DDX23 novel NA NA NA NA no_subtype FALSE canonical NA NA 67 None 2 1 0 TRUE 0 0 NA C coding 820 2460 71 2530 PB.7041.1 chr12 - 2596 18 full-splice_match GLS2 ENST00000311966.8 2623 18 19 8 no_subtype FALSE canonical NA NA 442 None 2 5 0 FALSE 0 0 NA A coding 535 1605 462 2066 PB.1262.1 chr2 + 3738 8 novel_not_in_catalog YIPF4 novel NA NA NA NA no_subtype TRUE canonical NA NA 3187 None 2 34 1 TRUE 0 0 NA C coding 244 732 256 987 PB.8098.2 chr15 - 3302 6 novel_in_catalog RAB27A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 78 None 22 10 0 FALSE 0 0 NA C coding 221 663 101 763 PB.8098.3 chr15 - 2808 7 full-splice_match RAB27A ENST00000336787.5 3446 7 -25 663 no_subtype FALSE canonical NA NA 125 None 14 7 0 FALSE 0 0 NA C coding 221 663 268 930 PB.266.67 chr1 - 5715 20 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 102 None 2 21 5 TRUE 0 0 NA C coding 704 2112 3343 5454 PB.8857.1 chr17 + 1305 8 novel_not_in_catalog SPNS3 novel NA NA NA NA no_subtype FALSE canonical NA NA 895 None 2 3 0 FALSE 0 0 NA A coding 304 912 70 981 PB.4759.1 chr7 - 3499 18 novel_not_in_catalog PRKAG2 novel NA NA NA NA no_subtype FALSE canonical NA NA 833 None 2 9 0 TRUE 0 0 NA B coding 563 1689 735 2423 PB.266.63 chr1 - 2710 16 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 2 3 2 TRUE 0 0 NA C coding 773 2319 131 2449 PB.10333.1 chr20 - 2134 10 full-splice_match AHCY ENST00000217426.6 2143 10 1 8 no_subtype FALSE canonical NA NA 105 None 17 2 0 FALSE 0 0 NA A coding 432 1296 78 1373 PB.266.61 chr1 - 5804 19 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 88 None 2 27 4 TRUE 0 0 NA C coding 704 2112 3431 5542 PB.266.60 chr1 - 3365 17 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 3 4 1 FALSE 0 0 NA C coding 605 1815 484 2298 PB.8542.5 chr16 + 2820 14 novel_not_in_catalog MVP novel NA NA NA NA no_subtype FALSE canonical NA NA 2563 None 4 0 0 TRUE 0 0 NA B coding 479 1437 36 1472 PB.8542.1 chr16 + 2759 15 novel_not_in_catalog MVP novel NA NA NA NA no_subtype FALSE canonical NA NA 2489 None 610 1 0 TRUE 0 0 NA B coding 893 2679 36 2714 PB.266.69 chr1 - 3001 17 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 2 4 2 FALSE 0 0 NA C coding 679 2037 131 2167 PB.266.68 chr1 - 3193 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 95 None 4 3 1 FALSE 0 0 NA C coding 836 2508 426 2933 PB.10760.1 chr22 + 1072 4 full-splice_match TOMM22 ENST00000216034.5 2040 4 25 943 no_subtype FALSE canonical NA NA 360 None 6 6 0 FALSE 0 0 NA A coding 142 426 7 432 PB.10092.2 chr19 + 1549 12 full-splice_match CYTH2 ENST00000452733.6 4780 12 302 2929 no_subtype TRUE canonical NA NA 1286 None 19 1 0 FALSE 0 0 NA A coding 399 1197 175 1371 PB.1926.1 chr2 + 3185 18 novel_not_in_catalog ATG16L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1777 None 21 7 1 TRUE 0 0 NA B coding 588 1764 105 1868 PB.1926.3 chr2 + 3568 18 novel_not_in_catalog ATG16L1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2160 None 3 8 0 TRUE 0 0 NA B coding 470 1410 158 1567 PB.1926.2 chr2 + 3280 19 novel_not_in_catalog ATG16L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1871 None 14 6 0 TRUE 0 0 NA B coding 607 1821 142 1962 PB.4016.2 chr6 + 2200 16 full-splice_match CYB5R4 ENST00000369681.9 9252 16 52 7000 no_subtype FALSE canonical NA NA 1599 None 2 5 1 FALSE 0 0 NA C coding 521 1563 89 1651 PB.4016.3 chr6 + 3949 2 novel_not_in_catalog CYB5R4 novel NA NA NA NA no_subtype FALSE canonical NA NA 3498 None 2 24 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.8478.3 chr16 + 5828 23 novel_not_in_catalog C16orf62 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5324 None 2 28 2 TRUE 0 0 NA C coding 270 810 10 819 PB.6588.1 chr11 - 1923 11 full-splice_match SLC36A4 ENST00000326402.8 6012 11 -57 4146 no_subtype FALSE canonical NA NA 243 None 4 2 0 FALSE 0 0 NA A coding 504 1512 189 1700 PB.7748.1 chr14 - 3225 2 genic_intron novelGene_586 novel NA NA NA NA no_subtype FALSE canonical NA NA 2979 None 17 24 1 FALSE 0 0 NA A coding 38 114 199 312 PB.707.3 chr1 - 5804 15 novel_not_in_catalog ADAR novel NA NA NA NA no_subtype FALSE canonical NA NA 1214 None 20 14 0 TRUE 0 0 NA B coding 931 2793 499 3291 PB.5354.3 chr9 + 5887 25 novel_in_catalog DAPK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3365 None 9 7 0 FALSE 0 0 NA C coding 1430 4290 306 4595 PB.8534.3 chr16 + 2045 10 novel_in_catalog LAT novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1451 None 2 18 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.8534.1 chr16 + 1664 12 novel_not_in_catalog LAT novel NA NA NA NA no_subtype FALSE canonical NA NA 1079 None 143 11 2 FALSE 0 0 NA B coding 133 399 671 1069 PB.5156.1 chr8 + 2896 9 novel_not_in_catalog ZNF707 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2710 None 2 24 2 TRUE 0 0 NA A coding 369 1107 247 1353 PB.9878.1 chr19 + 1354 5 full-splice_match MPV17L2 ENST00000599612.2 1408 5 36 18 no_subtype FALSE canonical NA NA 628 None 3 1 0 FALSE 0 0 NA A coding 206 618 65 682 PB.1457.3 chr2 - 2681 15 novel_not_in_catalog IMMT novel NA NA NA NA no_subtype FALSE non_canonical NA NA 125 None 31 5 1 TRUE 0 0 NA B coding 757 2271 81 2351 PB.6648.1 chr11 - 2857 16 full-splice_match ZW10 ENST00000200135.7 2992 16 119 16 no_subtype FALSE canonical NA NA 131 None 29 3 0 FALSE 0 0 NA A coding 779 2337 27 2363 PB.181.1 chr1 + 2705 4 genic_intron novelGene_268 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2471 None 2 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3565.1 chr5 + 2008 1 full-splice_match ADRB2 ENST00000305988.5 3443 1 1367 68 no_subtype FALSE canonical NA NA NA None 9 5 0 FALSE 0 0 NA A coding 413 1239 221 1459 PB.7174.2 chr12 - 1974 19 full-splice_match LTA4H ENST00000228740.6 2139 19 84 81 no_subtype TRUE canonical NA NA 217 None 26 0 0 FALSE 0 0 NA A coding 611 1833 59 1891 PB.3205.1 chr5 - 3039 1 antisense novelGene_IL7R_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 14 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3799.3 chr6 - 2929 5 novel_in_catalog ZNF322 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 295 None 4 7 2 FALSE 0 0 NA C coding 402 1206 669 1874 PB.3799.2 chr6 - 2930 6 novel_not_in_catalog ZNF322 novel NA NA NA NA no_subtype FALSE canonical NA NA 295 None 3 8 2 TRUE 0 0 NA C coding 402 1206 669 1874 PB.3799.1 chr6 - 2884 4 full-splice_match ZNF322 ENST00000415922.6 4817 4 16 1917 no_subtype FALSE canonical NA NA 296 None 14 7 1 FALSE 0 0 NA C coding 402 1206 631 1836 PB.282.1 chr1 - 1552 1 genic_intron novelGene_392 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10323.1 chr20 - 3749 1 incomplete-splice_match NOL4L ENST00000359676.9 5991 8 2232 11 no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A coding 141 423 1451 1873 PB.6552.1 chr11 - 1384 7 full-splice_match CLNS1A ENST00000525428.5 2993 7 -18 1627 no_subtype FALSE canonical NA NA 234 None 36 2 0 FALSE 0 0 NA A coding 237 711 110 820 PB.8847.1 chr17 + 5745 11 novel_not_in_catalog CTNS novel NA NA NA NA no_subtype FALSE canonical NA NA 4441 None 2 42 1 TRUE 0 0 NA B coding 248 744 581 1324 PB.8847.2 chr17 + 2509 12 novel_not_in_catalog CTNS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1206 None 2 14 2 TRUE 0 0 NA B coding 348 1044 294 1337 PB.9748.3 chr19 + 3761 13 novel_not_in_catalog PPAN-P2RY11 novel NA NA NA NA no_subtype FALSE canonical NA NA 2029 None 2 22 1 FALSE 0 0 NA A coding 473 1419 33 1451 PB.9748.1 chr19 + 1586 12 novel_not_in_catalog PPAN novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1241 None 29 3 1 TRUE 0 0 NA A coding 356 1068 46 1113 PB.1011.3 chr1 - 1899 8 full-splice_match FCMR ENST00000367091.7 1950 8 57 -6 no_subtype FALSE canonical NA NA 124 None 30 5 0 FALSE 0 0 NA C coding 390 1170 88 1257 PB.7188.1 chr12 + 1729 11 full-splice_match ACTR6 ENST00000188312.6 2464 11 730 5 no_subtype FALSE canonical NA NA 1096 None 8 5 0 FALSE 0 0 NA A coding 396 1188 36 1223 PB.5536.1 chr9 - 1593 7 novel_not_in_catalog PTGES2 novel NA NA NA NA no_subtype FALSE canonical NA NA 287 None 14 5 1 FALSE 0 0 NA A coding 309 927 9 935 PB.5981.1 chr10 - 5665 2 genic FBXW4 novel NA NA NA NA no_subtype FALSE canonical NA NA 3766 None 4 31 1 TRUE 0 0 NA A coding 120 360 1536 1895 PB.1131.6 chr1 - 2608 1 novel_in_catalog LYST novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1131.1 chr1 - 6357 30 incomplete-splice_match LYST ENST00000389793.6 13480 53 7122 1 5prime_fragment FALSE canonical NA NA 112 None 2 10 0 FALSE 0 0 NA B coding 1475 4425 32 4456 PB.11157.1 chrX + 3246 12 full-splice_match STK26 ENST00000394334.6 3288 12 40 2 no_subtype TRUE canonical NA NA 1439 None 9 11 0 FALSE 0 0 NA A coding 416 1248 214 1461 PB.1734.3 chr2 - 4441 31 full-splice_match NCKAP1 ENST00000361354.8 20347 31 127 15779 no_subtype FALSE canonical NA NA 354 None 2 2 0 FALSE 0 0 NA C coding 1128 3384 247 3630 PB.5508.2 chr9 + 3125 16 incomplete-splice_match GAPVD1 ENST00000470056.5 8923 25 0 5798 3prime_fragment FALSE canonical NA NA 3037 None 2 4 0 FALSE 0 0 NA B coding 988 2964 161 3124 PB.856.4 chr1 - 5592 8 novel_not_in_catalog SELL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 115 None 2 13 0 TRUE 0 0 NA C coding 245 735 74 808 PB.11054.1 chrX + 2893 2 full-splice_match P2RY10 ENST00000544091.1 1597 2 71 -1367 no_subtype FALSE canonical NA NA 93 None 29 11 0 FALSE 0 0 NA C coding 339 1017 107 1123 PB.8863.1 chr17 + 806 6 full-splice_match PSMB6 ENST00000270586.7 852 6 42 4 no_subtype FALSE canonical NA NA 586 None 3 4 0 FALSE 0 0 NA A coding 239 717 10 726 PB.1790.1 chr2 - 2821 1 genic_intron novelGene_1376 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9837.2 chr19 - 3274 15 novel_in_catalog AKAP8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 93 None 4 12 1 FALSE 0 0 NA C coding 364 1092 75 1166 PB.9837.3 chr19 - 3252 14 novel_in_catalog AKAP8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 229 None 2 20 1 FALSE 0 0 NA C coding 618 1854 433 2286 PB.10104.2 chr19 + 3086 18 novel_not_in_catalog ALDH16A1 novel NA NA NA NA no_subtype TRUE canonical NA NA 3012 None 2 12 0 TRUE 0 0 NA C coding 802 2406 32 2437 PB.9837.1 chr19 - 3058 14 full-splice_match AKAP8 ENST00000269701.6 3670 14 45 567 no_subtype FALSE canonical NA NA 35 None 15 11 1 FALSE 0 0 NA C coding 692 2076 17 2092 PB.2056.4 chr3 - 3136 20 incomplete-splice_match TOP2B ENST00000264331.8 5358 36 2133 89 5prime_fragment FALSE canonical NA NA 51 None 2 3 0 FALSE 0 0 NA B coding 937 2811 10 2820 PB.2056.5 chr3 - 3914 26 incomplete-splice_match TOP2B ENST00000264331.8 5358 36 1343 101 5prime_fragment FALSE canonical NA NA 137 None 2 5 0 FALSE 0 0 NA B coding 1104 3312 299 3610 PB.3544.2 chr5 + 1551 1 incomplete-splice_match PCDHGA1 ENST00000517417.2 4604 4 3010 44 no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8560.1 chr16 + 1375 1 incomplete-splice_match ITGAL ENST00000356798.10 5213 31 3836 3 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7576.2 chr13 + 3840 12 incomplete-splice_match ARHGEF7 ENST00000426073.6 4921 20 1072 9 internal_fragment FALSE canonical NA NA 1102 None 2 17 0 FALSE 0 0 NA B coding 401 1203 20 1222 PB.4827.1 chr8 + 2931 21 full-splice_match SORBS3 ENST00000240123.11 3459 21 232 296 no_subtype FALSE canonical NA NA 2105 None 3 8 0 FALSE 0 0 NA C coding 671 2013 152 2164 PB.3106.1 chr4 - 2899 8 full-splice_match CTSO ENST00000433477.3 2954 8 35 20 no_subtype FALSE canonical NA NA 170 None 119 8 0 FALSE 0 0 NA C coding 321 963 36 998 PB.4827.4 chr8 + 1957 10 full-splice_match SORBS3 ENST00000523965.5 2028 10 68 3 no_subtype FALSE canonical NA NA 1131 None 4 8 0 FALSE 0 0 NA C coding 329 987 204 1190 PB.2267.1 chr3 - 1073 8 full-splice_match DNASE1L3 ENST00000394549.6 1294 8 218 3 no_subtype FALSE canonical NA NA 240 None 6 0 0 FALSE 0 0 NA A coding 305 915 100 1014 PB.6441.4 chr11 + 1845 12 full-splice_match KAT5 ENST00000530446.5 1697 12 90 -238 no_subtype FALSE canonical NA NA 1289 None 8 10 0 FALSE 0 0 NA C coding 302 906 516 1421 PB.8161.4 chr15 - 5631 31 incomplete-splice_match DENND4A ENST00000443035.7 8665 33 419 2615 5prime_fragment FALSE canonical NA NA 108 None 2 7 0 FALSE 0 0 NA B coding 1756 5268 248 5515 PB.2312.1 chr3 - 2937 16 full-splice_match GBE1 ENST00000429644.6 3461 16 514 10 no_subtype FALSE canonical NA NA 273 None 37 6 0 FALSE 0 0 NA C coding 702 2106 131 2236 PB.8161.6 chr15 - 1798 6 novel_not_in_catalog DENND4A novel NA NA NA NA no_subtype FALSE canonical NA NA 231 None 3 5 0 TRUE 0 0 NA B coding 270 810 917 1726 PB.6441.1 chr11 + 1823 13 full-splice_match KAT5 ENST00000352980.8 2059 13 234 2 no_subtype FALSE canonical NA NA 1267 None 9 5 0 FALSE 0 0 NA C coding 461 1383 17 1399 PB.8161.3 chr15 - 5639 30 novel_in_catalog DENND4A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 244 None 2 3 0 FALSE 0 0 NA B coding 1713 5139 384 5522 PB.8161.2 chr15 - 5793 30 incomplete-splice_match DENND4A ENST00000431932.6 5875 32 493 -411 5prime_fragment FALSE canonical NA NA 27 None 2 4 0 FALSE 0 0 NA B coding 1713 5139 167 5305 PB.9001.1 chr17 - 3773 24 full-splice_match SPAG5 ENST00000321765.9 4040 24 264 3 no_subtype FALSE canonical NA NA 120 None 27 4 0 FALSE 0 0 NA C coding 1193 3579 70 3648 PB.9001.2 chr17 - 3192 24 novel_in_catalog SPAG5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 120 None 2 0 0 FALSE 0 0 NA C coding 919 2757 303 3059 PB.8161.9 chr15 - 2643 7 novel_not_in_catalog DENND4A novel NA NA NA NA no_subtype FALSE canonical NA NA 117 None 2 8 0 TRUE 0 0 NA B coding 271 813 222 1034 PB.8161.8 chr15 - 1526 1 genic_intron novelGene_617 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7180.1 chr12 + 3617 4 full-splice_match TMPO ENST00000266732.8 3615 4 -10 8 no_subtype FALSE canonical NA NA 813 None 5 11 0 FALSE 0 0 NA C coding 694 2082 249 2330 PB.6652.1 chr11 + 1827 5 full-splice_match RBM7 ENST00000375490.9 2064 5 218 19 no_subtype FALSE canonical NA NA 366 None 53 4 0 FALSE 0 0 NA A coding 201 603 124 726 PB.10995.15 chrX - 1799 11 novel_not_in_catalog ALAS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 28 None 11 1 0 FALSE 0 0 NA C coding 545 1635 44 1678 PB.10995.16 chrX - 1837 10 novel_not_in_catalog ALAS2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 28 None 3 7 1 TRUE 0 0 NA C coding 434 1302 415 1716 PB.10995.12 chrX - 1924 12 novel_not_in_catalog ALAS2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 40 None 3 18 4 TRUE 0 0 NA C coding 386 1158 646 1803 PB.10995.13 chrX - 1921 11 full-splice_match ALAS2 ENST00000396198.7 1936 11 8 7 no_subtype FALSE canonical NA NA 28 None 4 2 0 FALSE 0 0 NA C coding 550 1650 151 1800 PB.9180.1 chr17 - 1848 2 full-splice_match AC002117.1 ENST00000589950.1 570 2 0 -1278 no_subtype FALSE canonical NA NA 50 None 2 8 0 FALSE 0 0 NA C coding 196 588 631 1218 PB.2071.1 chr3 + 6431 2 genic_intron novelGene_295 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1333 None 2 59 1 FALSE 0 0 NA A coding 100 300 4582 4881 PB.6173.4 chr11 - 3912 11 novel_in_catalog TRIM3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 129 None 7 11 0 FALSE 0 0 NA C coding 728 2184 167 2350 PB.9180.2 chr17 - 2581 1 genic AC002117.1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6173.2 chr11 - 2795 12 full-splice_match TRIM3 ENST00000345851.7 2879 12 79 5 no_subtype FALSE canonical NA NA 115 None 8 3 0 FALSE 0 0 NA C coding 744 2232 153 2384 PB.6173.3 chr11 - 3963 11 novel_not_in_catalog TRIM3 novel NA NA NA NA no_subtype FALSE canonical NA NA 177 None 3 12 2 FALSE 0 0 NA C coding 728 2184 215 2398 PB.548.1 chr1 - 2170 19 novel_not_in_catalog EPS8L3 novel NA NA NA NA no_subtype FALSE canonical NA NA 96 None 2 3 0 FALSE 0 0 NA B coding 579 1737 121 1857 PB.6173.1 chr11 - 2821 12 novel_not_in_catalog TRIM3 novel NA NA NA NA no_subtype TRUE canonical NA NA 138 None 7 4 1 FALSE 0 0 NA C coding 744 2232 176 2407 PB.4837.1 chr8 + 3000 2 full-splice_match SLC25A37 ENST00000520654.1 3018 2 0 18 no_subtype FALSE canonical NA NA 160 None 30 17 0 FALSE 0 0 NA C coding 107 321 95 415 PB.4573.1 chr7 - 1733 1 genic_intron novelGene_929 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4837.3 chr8 + 6611 3 full-splice_match SLC25A37 ENST00000518881.5 3404 3 31 -3238 no_subtype FALSE canonical NA NA 2486 None 21 34 0 FALSE 0 0 NA C coding 187 561 2444 3004 PB.4837.2 chr8 + 2623 1 novel_in_catalog SLC25A37 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 26 13 0 FALSE 0 0 NA C coding 25 75 594 668 PB.4837.4 chr8 + 2779 1 novel_in_catalog SLC25A37 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.61.2 chr1 + 4087 19 full-splice_match MFN2 ENST00000235329.9 4539 19 138 314 no_subtype FALSE canonical NA NA 2388 None 37 7 0 FALSE 0 0 NA C coding 737 2211 245 2455 PB.4837.8 chr8 + 1561 1 incomplete-splice_match SLC25A37 ENST00000519973.5 4823 4 3258 5 no_subtype FALSE canonical NA NA NA None 16 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.61.1 chr1 + 4439 20 novel_in_catalog MFN2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2433 None 7 12 0 FALSE 0 0 NA C coding 737 2211 290 2500 PB.7959.110 chr14 - 1507 6 fusion IGHA1,IGHV1-2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 107 None 4 12 2 TRUE 0 0 NA B coding 467 1401 62 1462 PB.961.4 chr1 + 1829 9 novel_not_in_catalog ELF3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1035 None 5 6 1 FALSE 0 0 NA C coding 280 840 91 930 PB.3384.3 chr5 - 1355 3 novel_not_in_catalog GLRX novel NA NA NA NA no_subtype FALSE canonical NA NA 271 None 41 4 1 FALSE 0 0 NA C coding 106 318 65 382 PB.4026.1 chr6 - 1835 5 full-splice_match AKIRIN2 ENST00000257787.5 1662 5 -31 -142 no_subtype FALSE canonical NA NA 791 None 23 4 0 FALSE 0 0 NA A coding 203 609 557 1165 PB.961.5 chr1 + 2671 6 novel_in_catalog ELF3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1877 None 6 9 0 FALSE 0 0 NA C coding 144 432 509 940 PB.6769.1 chr12 + 1350 6 novel_not_in_catalog CCND2 novel NA NA NA NA no_subtype FALSE canonical NA NA 999 None 6 2 0 TRUE 0 0 NA C coding 289 867 280 1146 PB.5980.2 chr10 + 1782 1 genic_intron novelGene_925 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6769.2 chr12 + 6454 5 full-splice_match CCND2 ENST00000261254.7 6480 5 25 1 no_subtype FALSE canonical NA NA 964 None 8 32 0 FALSE 0 0 NA C coding 289 867 245 1111 PB.6769.5 chr12 + 2780 1 incomplete-splice_match CCND2 ENST00000261254.7 6480 5 3699 2 no_subtype FALSE canonical NA NA NA None 139 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6434.4 chr11 + 3711 2 genic NEAT1_1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2368 None 6 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4550.1 chr7 + 1257 7 full-splice_match PILRA ENST00000198536.6 1316 7 99 -40 no_subtype FALSE canonical NA NA 902 None 15 5 0 FALSE 0 0 NA A coding 303 909 114 1022 PB.9196.1 chr17 + 3051 22 full-splice_match KPNB1 ENST00000290158.8 6139 22 231 2857 no_subtype FALSE canonical NA NA 2806 None 147 0 0 FALSE 0 0 NA A coding 876 2628 177 2804 PB.5384.2 chr9 + 4056 3 novel_not_in_catalog C9orf3 novel NA NA NA NA no_subtype TRUE canonical NA NA 3342 None 6 29 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.9327.6 chr17 + 4278 2 novel_not_in_catalog PRKAR1A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1102 None 2 37 1 TRUE 0 0 NA C coding 114 342 199 540 PB.6657.3 chr11 - 2568 1 antisense novelGene_PAFAH1B2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9327.4 chr17 + 3499 11 full-splice_match PRKAR1A ENST00000589228.5 4256 11 85 672 no_subtype FALSE canonical NA NA 1016 None 372 11 0 FALSE 0 0 NA C coding 381 1143 44 1186 PB.9327.5 chr17 + 2119 2 full-splice_match PRKAR1A ENST00000592194.1 556 2 6 -1569 no_subtype FALSE canonical NA NA 128 None 2 12 0 FALSE 0 0 NA C coding 66 198 135 332 PB.9327.2 chr17 + 3594 12 novel_not_in_catalog PRKAR1A novel NA NA NA NA no_subtype FALSE canonical NA NA 1113 None 2 17 2 TRUE 0 0 NA C coding 381 1143 141 1283 PB.9327.3 chr17 + 3527 11 full-splice_match PRKAR1A ENST00000589228.5 4256 11 56 673 no_subtype FALSE canonical NA NA 1045 None 5 11 0 FALSE 0 0 NA C coding 381 1143 73 1215 PB.1004.6 chr1 + 3559 15 incomplete-splice_match SRGAP2 ENST00000605610.5 3212 20 1100 -1447 internal_fragment FALSE canonical NA NA 1555 None 2 1 0 FALSE 0 0 NA B coding 461 1383 183 1565 PB.9327.1 chr17 + 3633 11 full-splice_match PRKAR1A ENST00000358598.6 3576 11 -62 5 no_subtype FALSE canonical NA NA 1152 None 4 12 0 FALSE 0 0 NA C coding 381 1143 180 1322 PB.8917.1 chr17 - 1238 9 full-splice_match AURKB ENST00000585124.5 1227 9 23 -34 no_subtype FALSE canonical NA NA 46 None 2 1 0 FALSE 0 0 NA A coding 344 1032 72 1103 PB.2469.1 chr3 + 3626 27 full-splice_match ATP2C1 ENST00000505330.5 4888 27 102 1160 no_subtype FALSE canonical NA NA 2855 None 2 2 0 FALSE 0 0 NA C coding 903 2709 275 2983 PB.6434.5 chr11 + 2699 4 genic NEAT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2543 None 2 17 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.5768.21 chr10 - 3386 10 novel_not_in_catalog NCOA4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 88 None 3 26 1 TRUE 0 0 NA C coding 573 1719 169 1887 PB.7959.118 chr14 - 1474 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 98 None 2 12 3 TRUE 0 0 NA B coding 466 1398 32 1429 PB.1247.1 chr2 + 1593 4 full-splice_match FOSL2 ENST00000264716.8 6708 4 771 4344 no_subtype FALSE canonical NA NA 554 None 42 2 0 FALSE 0 0 NA C coding 326 978 93 1070 PB.4034.6 chr6 - 2399 2 genic_intron novelGene_825 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 249 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2175.1 chr3 - 2620 21 full-splice_match SLC26A6 ENST00000395550.6 2589 21 -33 2 no_subtype FALSE canonical NA NA 104 None 6 5 1 FALSE 0 0 NA A coding 759 2277 82 2358 PB.6657.2 chr11 - 3674 20 novel_not_in_catalog PCSK7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 32 None 3 8 1 TRUE 0 0 NA B coding 785 2355 165 2519 PB.4966.1 chr8 + 3719 1 genic_intron novelGene_663 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6967.3 chr12 + 2943 2 novel_not_in_catalog LARP4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 302 None 12 17 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.5450.1 chr9 + 1770 5 full-splice_match SLC31A1 ENST00000374212.4 4744 5 27 2947 no_subtype FALSE canonical NA NA 496 None 28 6 0 FALSE 0 0 NA A coding 190 570 126 695 PB.6089.1 chr10 + 3024 1 antisense novelGene_LINC00959_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A coding 111 333 662 994 PB.7328.3 chr12 - 2420 17 full-splice_match ANAPC5 ENST00000541887.5 2400 17 -22 2 no_subtype TRUE canonical NA NA 277 None 2 1 0 FALSE 0 0 NA C coding 742 2226 71 2296 PB.83.1 chr1 - 2136 3 full-splice_match HSPB7 ENST00000311890.13 2892 3 750 6 no_subtype FALSE canonical NA NA 276 None 2 13 1 FALSE 0 0 NA A coding 170 510 78 587 PB.7957.1 chr14 + 1172 8 full-splice_match CRIP2 ENST00000329146.8 1857 8 671 14 no_subtype FALSE canonical NA NA 601 None 4 1 0 FALSE 0 0 NA A coding 208 624 43 666 PB.7023.1 chr12 - 1220 3 novel_not_in_catalog PYM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 188 None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1930.1 chr2 - 2850 10 novel_not_in_catalog HJURP novel NA NA NA NA no_subtype FALSE canonical NA NA 151 None 8 31 4 TRUE 0 0 NA A coding 717 2151 56 2206 PB.4513.10 chr7 - 5747 5 novel_not_in_catalog SAMD9L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 187 None 6 8 0 TRUE 0 0 NA B coding 1584 4752 684 5435 PB.3219.1 chr5 + 2749 4 novel_not_in_catalog PTGER4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1478 None 78 4 0 TRUE 0 0 NA A coding 488 1464 605 2068 PB.8958.1 chr17 + 3883 24 novel_not_in_catalog LLGL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3563 None 4 8 1 TRUE 0 0 NA A coding 1064 3192 44 3235 PB.3504.2 chr5 - 2700 15 novel_in_catalog CDC23 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 172 None 2 7 0 FALSE 0 0 NA C coding 506 1518 12 1529 PB.3504.1 chr5 - 2615 16 full-splice_match CDC23 ENST00000394886.6 3155 16 20 520 no_subtype FALSE canonical NA NA 172 None 14 7 0 FALSE 0 0 NA C coding 597 1791 12 1802 PB.642.1 chr1 + 2774 18 novel_not_in_catalog PDE4DIP novel NA NA NA NA no_subtype FALSE canonical NA NA 2269 None 2 6 0 TRUE 0 0 NA B coding 740 2220 222 2441 PB.1693.2 chr2 + 2106 1 incomplete-splice_match CYBRD1 ENST00000321348.8 4365 4 2250 10 no_subtype FALSE canonical NA NA NA None 10 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8649.1 chr16 + 3376 1 antisense novelGene_CSNK2A2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 15 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.590.1 chr1 + 1516 1 antisense novelGene_NRAS_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 34 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3239.1 chr5 + 4430 23 novel_not_in_catalog NNT novel NA NA NA NA no_subtype TRUE canonical NA NA 3195 None 12 9 1 TRUE 0 0 NA B coding 1086 3258 85 3342 PB.3239.2 chr5 + 4344 23 novel_not_in_catalog NNT novel NA NA NA NA no_subtype FALSE canonical NA NA 3369 None 2 7 0 TRUE 0 0 NA B coding 1086 3258 259 3516 PB.3239.3 chr5 + 4233 23 novel_not_in_catalog NNT novel NA NA NA NA no_subtype FALSE canonical NA NA 3256 None 35 8 0 TRUE 0 0 NA B coding 1086 3258 146 3403 PB.3239.4 chr5 + 3973 23 novel_not_in_catalog NNT novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3208 None 4 5 1 TRUE 0 0 NA B coding 1086 3258 98 3355 PB.3239.5 chr5 + 3372 1 genic_intron novelGene_433 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.91 chr14 - 1521 10 fusion IGHV3-62,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 125 None 2 9 4 TRUE 0 0 NA B coding 364 1092 385 1476 PB.3931.2 chr6 + 1964 10 novel_in_catalog KLHDC3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1344 None 3 8 0 FALSE 0 0 NA C coding 262 786 187 972 PB.3931.1 chr6 + 1857 11 full-splice_match KLHDC3 ENST00000326974.8 1909 11 40 12 no_subtype FALSE canonical NA NA 1237 None 44 12 0 FALSE 0 0 NA C coding 382 1146 156 1301 PB.1730.1 chr2 + 3012 8 incomplete-splice_match SSFA2 ENST00000409136.5 3610 10 593 5 internal_fragment FALSE canonical NA NA 1839 None 4 7 0 FALSE 0 0 NA A coding 584 1752 72 1823 PB.10492.4 chr20 - 1497 6 novel_not_in_catalog RGS19 novel NA NA NA NA no_subtype FALSE canonical NA NA 224 None 18 7 0 TRUE 0 0 NA B coding 195 585 261 845 PB.10492.5 chr20 - 1405 8 novel_not_in_catalog RGS19 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 27 None 11 10 2 TRUE 0 0 NA B coding 217 651 103 753 PB.10601.1 chr21 - 1488 4 full-splice_match SUMO3 ENST00000332859.10 1807 4 76 243 no_subtype FALSE canonical NA NA 106 None 79 4 0 FALSE 0 0 NA A coding 103 309 86 394 PB.10570.1 chr21 + 2982 1 genic_intron novelGene_395 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4119.1 chr6 + 3066 3 genic_intron novelGene_1104 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1672 None 2 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.11091.1 chrX + 3561 5 novel_not_in_catalog GPRASP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 375 None 6 6 1 FALSE 0 0 NA B coding 838 2514 709 3222 PB.11137.1 chrX + 767 6 full-splice_match MCTS1 ENST00000371317.9 1018 6 154 97 no_subtype FALSE canonical NA NA 567 None 2 0 0 FALSE 0 0 NA A coding 181 543 104 646 PB.2392.1 chr3 - 2741 1 genic_intron novelGene_1020 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4602.18 chr7 - 1756 14 incomplete-splice_match SLC26A3 ENST00000340010.9 2863 21 -13 1120 internal_fragment FALSE canonical NA NA 110 None 2 6 0 FALSE 0 0 NA C coding 519 1557 199 1755 PB.93.5 chr1 + 5923 2 genic_intron novelGene_165 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2530 None 2 35 0 FALSE 0 0 NA A coding 201 603 3460 4062 PB.93.4 chr1 + 3492 21 novel_not_in_catalog ARHGEF10L novel NA NA NA NA no_subtype FALSE canonical NA NA 2475 None 2 5 0 TRUE 0 0 NA B coding 590 1770 50 1819 PB.93.1 chr1 + 4370 32 novel_not_in_catalog ARHGEF10L novel NA NA NA NA no_subtype FALSE canonical NA NA 3359 None 7 8 0 TRUE 0 0 NA B coding 1240 3720 170 3889 PB.93.3 chr1 + 3553 23 novel_not_in_catalog ARHGEF10L novel NA NA NA NA no_subtype FALSE canonical NA NA 2535 None 15 3 0 TRUE 0 0 NA B coding 989 2967 99 3065 PB.10633.2 chr22 - 1561 9 novel_not_in_catalog GNB1L novel NA NA NA NA no_subtype TRUE canonical NA NA 190 None 3 2 0 TRUE 0 0 NA B coding 327 981 308 1288 PB.3916.2 chr6 - 2599 1 novel_in_catalog CCND3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 17 0 FALSE 0 0 NA C coding 255 765 504 1268 PB.906.1 chr1 - 2881 1 antisense novelGene_NPL_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11091.2 chrX + 3501 5 novel_not_in_catalog GPRASP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 309 None 2 7 1 FALSE 0 0 NA B coding 838 2514 643 3156 PB.11236.1 GL000219.1 - 1013 9 novel_not_in_catalog AL592183.1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 227 None 4 3 3 TRUE 0 0 NA A coding 104 312 607 918 PB.530.4 chr1 + 1927 1 incomplete-splice_match PRPF38B ENST00000370025.8 3693 6 1144 623 no_subtype FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3916.1 chr6 - 2626 1 novel_in_catalog CCND3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.530.2 chr1 + 1610 5 novel_not_in_catalog PRPF38B novel NA NA NA NA no_subtype FALSE canonical NA NA 813 None 2 7 0 FALSE 0 0 NA C coding 93 279 254 532 PB.7033.5 chr12 - 4036 28 full-splice_match SMARCC2 ENST00000267064.8 4076 28 33 7 no_subtype FALSE canonical NA NA 165 None 77 1 0 FALSE 0 0 NA C coding 1214 3642 55 3696 PB.6169.1 chr11 - 3034 2 genic PRKCDBP novel NA NA NA NA no_subtype FALSE canonical NA NA 1756 None 6 10 1 TRUE 0 0 NA A coding 191 573 26 598 PB.5198.1 chr9 + 1805 8 novel_in_catalog SMARCA2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 937 None 2 5 0 FALSE 0 0 NA B coding 276 828 143 970 PB.7033.8 chr12 - 4112 29 full-splice_match SMARCC2 ENST00000550164.5 4114 29 -18 20 no_subtype FALSE canonical NA NA 144 None 10 0 0 FALSE 0 0 NA C coding 1245 3735 34 3768 PB.9493.1 chr18 - 3170 18 novel_not_in_catalog AFG3L2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 280 None 15 4 0 TRUE 0 0 NA A coding 799 2397 167 2563 PB.4624.1 chr7 + 2947 3 full-splice_match CAV2 ENST00000222693.4 3301 3 353 1 no_subtype FALSE canonical NA NA 377 None 9 18 0 FALSE 0 0 NA A coding 162 486 40 525 PB.4602.11 chr7 - 3103 22 novel_not_in_catalog SLC26A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 96 None 7 11 1 TRUE 0 0 NA C coding 764 2292 431 2722 PB.2974.4 chr4 - 1629 9 novel_not_in_catalog DNAJB14 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 146 None 2 16 3 TRUE 0 0 NA C coding 370 1110 14 1123 PB.7959.182 chr14 - 1559 11 fusion IGHV1-2,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 106 None 2 17 6 TRUE 0 0 NA B coding 196 588 837 1424 PB.7959.183 chr14 - 1567 10 fusion IGHV4-4,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 18 4 TRUE 0 0 NA B coding 196 588 845 1432 PB.7959.180 chr14 - 1572 9 fusion IGHV3-23,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 124 None 2 8 4 TRUE 0 0 NA B coding 196 588 850 1437 PB.7959.181 chr14 - 1577 8 fusion IGHG1,IGHV3-7,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 3 8 3 TRUE 0 0 NA B coding 196 588 855 1442 PB.9746.1 chr19 - 2835 24 incomplete-splice_match COL5A3 ENST00000264828.3 6174 67 3338 1 5prime_fragment FALSE canonical NA NA 36 None 2 6 0 FALSE 0 0 NA A coding 578 1734 250 1983 PB.10153.2 chr19 + 2847 14 novel_not_in_catalog PPP2R1A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2720 None 3 9 0 TRUE 0 0 NA C coding 554 1662 63 1724 PB.7959.184 chr14 - 1509 8 fusion IGHG1,IGHV3-7,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 118 None 2 10 4 TRUE 0 0 NA B coding 196 588 787 1374 PB.7959.185 chr14 - 1513 12 fusion IGHV2-26,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 60 None 3 10 7 TRUE 0 0 NA B coding 196 588 791 1378 PB.8962.2 chr17 + 6249 4 novel_not_in_catalog SMCR8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5417 None 2 19 2 TRUE 0 0 NA C coding 937 2811 489 3299 PB.7959.188 chr14 - 1507 8 fusion IGHG1,IGHV3-13,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 103 None 3 6 3 TRUE 0 0 NA A coding 196 588 785 1372 PB.8962.1 chr17 + 6042 2 full-splice_match SMCR8 ENST00000406438.4 8279 2 -8 2245 no_subtype FALSE canonical NA NA 2848 None 2 14 0 FALSE 0 0 NA C coding 937 2811 489 3299 PB.11148.2 chrX + 2807 8 novel_not_in_catalog SASH3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1251 None 4 8 0 TRUE 0 0 NA B coding 268 804 148 951 PB.3572.1 chr5 + 3218 12 full-splice_match PPARGC1B ENST00000309241.9 10568 12 28 7322 no_subtype FALSE canonical NA NA 2975 None 12 8 0 FALSE 0 0 NA A coding 1023 3069 5 3073 PB.954.3 chr1 - 1762 5 novel_in_catalog CSRP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 116 None 2 8 0 FALSE 0 0 NA C coding 193 579 5 583 PB.9669.1 chr19 + 3747 1 incomplete-splice_match NFIC ENST00000589123.5 8068 11 4200 122 no_subtype FALSE canonical NA NA NA None 2 32 0 FALSE 0 0 NA C coding 117 351 2805 3155 PB.8655.1 chr16 - 2425 10 full-splice_match GOT2 ENST00000245206.9 2462 10 34 3 no_subtype FALSE canonical NA NA 184 None 15 5 0 FALSE 0 0 NA A coding 430 1290 96 1385 PB.6604.8 chr11 - 2554 10 novel_not_in_catalog CCDC82 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 23 None 2 11 1 TRUE 0 0 NA B coding 521 1563 120 1682 PB.953.1 chr1 - 2240 10 full-splice_match LAD1 ENST00000391967.6 2906 10 284 382 no_subtype FALSE canonical NA NA 56 None 3 5 0 FALSE 0 0 NA A coding 517 1551 19 1569 PB.5432.1 chr9 + 3812 5 novel_not_in_catalog AKAP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 2733 None 2 7 1 TRUE 0 0 NA A coding 859 2577 253 2829 PB.6510.1 chr11 - 4077 31 full-splice_match PDE2A ENST00000444035.6 4193 31 110 6 no_subtype FALSE canonical NA NA 97 None 2 5 0 FALSE 0 0 NA A coding 920 2760 79 2838 PB.7614.6 chr14 + 2399 7 novel_not_in_catalog LRP10 novel NA NA NA NA no_subtype FALSE canonical NA NA 1248 None 2 15 1 TRUE 0 0 NA C coding 231 693 1141 1833 PB.7614.5 chr14 + 2868 9 novel_not_in_catalog LRP10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1728 None 4 9 2 TRUE 0 0 NA C coding 718 2154 160 2313 PB.7614.2 chr14 + 3537 7 novel_not_in_catalog LRP10 novel NA NA NA NA no_subtype FALSE canonical NA NA 2402 None 2 11 1 TRUE 0 0 NA C coding 485 1455 556 2010 PB.7614.1 chr14 + 2825 7 full-splice_match LRP10 ENST00000359591.8 6886 7 559 3502 no_subtype FALSE canonical NA NA 1686 None 304 3 0 FALSE 0 0 NA C coding 713 2139 133 2271 PB.1073.3 chr1 - 1954 1 full-splice_match MIR320B2 ENST00000408479.1 138 1 -1863 47 no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3627.1 chr5 - 3037 6 novel_not_in_catalog CCNJL novel NA NA NA NA no_subtype FALSE canonical NA NA 112 None 4 9 0 FALSE 0 0 NA B coding 386 1158 165 1322 PB.1753.1 chr2 - 2959 9 full-splice_match NEMP2 ENST00000409150.7 6168 9 16 3193 no_subtype FALSE canonical NA NA 148 None 7 12 0 FALSE 0 0 NA A coding 417 1251 52 1302 PB.1938.2 chr2 - 4151 31 novel_not_in_catalog COL6A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 50 None 2 18 2 TRUE 0 0 NA B coding 993 2979 416 3394 PB.9335.1 chr17 - 2874 1 genic_intron novelGene_681 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A coding 103 309 689 997 PB.5707.1 chr10 + 2979 10 full-splice_match BMI1 ENST00000376663.7 3428 10 260 189 no_subtype FALSE canonical NA NA 896 None 15 3 0 FALSE 0 0 NA C coding 326 978 246 1223 PB.5707.2 chr10 + 3007 10 novel_in_catalog BMI1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 738 None 4 3 0 FALSE 0 0 NA C coding 326 978 88 1065 PB.4588.1 chr7 - 3345 16 novel_not_in_catalog PUS7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 196 None 2 19 2 TRUE 0 0 NA A coding 392 1176 932 2107 PB.8322.1 chr15 - 3153 14 novel_not_in_catalog TTC23 novel NA NA NA NA no_subtype TRUE canonical NA NA 113 None 6 11 1 TRUE 0 0 NA A coding 447 1341 134 1474 PB.1011.1 chr1 - 2376 10 novel_not_in_catalog FCMR novel NA NA NA NA no_subtype FALSE canonical NA NA 124 None 111 9 1 TRUE 0 0 NA C coding 390 1170 88 1257 PB.6181.1 chr11 + 2700 3 full-splice_match OLFML1 ENST00000329293.3 2792 3 45 47 no_subtype FALSE canonical NA NA 767 None 15 6 0 FALSE 0 0 NA A coding 402 1206 350 1555 PB.109.1 chr1 - 1627 12 novel_not_in_catalog DDOST novel NA NA NA NA no_subtype FALSE canonical NA NA 203 None 134 7 0 TRUE 0 0 NA B coding 439 1317 50 1366 PB.10031.1 chr19 - 3455 9 full-splice_match CEACAM1 ENST00000161559.10 3519 9 61 3 no_subtype FALSE canonical NA NA 138 None 5 8 0 FALSE 0 0 NA C coding 526 1578 75 1652 PB.2618.1 chr3 - 2555 7 full-splice_match KLHL6 ENST00000341319.7 6298 7 -17 3760 no_subtype FALSE canonical NA NA 346 None 50 5 0 FALSE 0 0 NA A coding 610 1830 87 1916 PB.10031.3 chr19 - 3145 7 full-splice_match CEACAM1 ENST00000403461.5 1263 7 -101 -1781 no_subtype FALSE canonical NA NA 171 None 7 9 0 FALSE 0 0 NA C coding 368 1104 108 1211 PB.10031.2 chr19 - 1628 8 full-splice_match CEACAM1 ENST00000403444.7 3427 8 2 1797 no_subtype FALSE canonical NA NA 166 None 45 5 0 FALSE 0 0 NA C coding 464 1392 103 1494 PB.6520.2 chr11 - 3139 8 full-splice_match RAB6A ENST00000310653.10 3389 8 -9 259 no_subtype FALSE canonical NA NA 581 None 79 11 0 FALSE 0 0 NA C coding 208 624 512 1135 PB.10884.1 chrX - 3756 19 novel_not_in_catalog CTPS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 142 None 6 8 0 FALSE 0 0 NA A coding 586 1758 182 1939 PB.10549.1 chr21 - 2364 3 genic_intron novelGene_340 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 738 None 3 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6520.4 chr11 - 2927 8 full-splice_match RAB6A ENST00000336083.7 3085 8 149 9 no_subtype FALSE canonical NA NA 377 None 14 13 0 FALSE 0 0 NA C coding 208 624 308 931 PB.1562.1 chr2 + 1690 17 full-splice_match MARCO ENST00000327097.4 1838 17 150 -2 no_subtype TRUE canonical NA NA 1414 None 46 1 0 FALSE 0 0 NA A coding 495 1485 61 1545 PB.6755.1 chr12 - 3705 1 antisense novelGene_WNK1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA B coding 128 384 452 835 PB.6755.2 chr12 - 2595 2 antisense novelGene_WNK1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2281 None 2 26 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.4168.1 chr6 - 1646 8 novel_not_in_catalog FUCA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 249 None 62 2 0 TRUE 0 0 NA B coding 467 1401 26 1426 PB.6990.1 chr12 + 1645 2 novel_not_in_catalog ZNF740 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 249 None 2 9 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.5568.8 chr9 - 1912 14 novel_in_catalog FNBP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 267 None 25 0 0 FALSE 0 0 NA B coding 555 1665 244 1908 PB.3007.1 chr4 + 2696 6 novel_not_in_catalog ALPK1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2449 None 2 10 0 TRUE 0 0 NA B coding 230 690 330 1019 PB.4619.1 chr7 + 4240 16 novel_not_in_catalog FOXP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2095 None 2 9 1 TRUE 0 0 NA A coding 621 1863 375 2237 PB.2326.1 chr3 + 2813 1 full-splice_match HNRNPKP4 ENST00000485383.1 1386 1 -109 -1318 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A coding 223 669 834 1502 PB.5379.1 chr9 + 2071 2 genic RP11-2B6.2 novel NA NA NA NA no_subtype FALSE canonical NA NA 788 None 2 32 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1073.1 chr1 - 2857 24 novel_not_in_catalog NVL novel NA NA NA NA no_subtype FALSE canonical NA NA 88 None 31 7 0 TRUE 0 0 NA A coding 856 2568 32 2599 PB.6636.1 chr11 + 2150 1 antisense novelGene_RDX_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6998.13 chr12 + 1426 13 full-splice_match PCBP2 ENST00000437231.5 3026 13 3 1597 no_subtype FALSE canonical NA NA 1267 None 4 5 0 FALSE 0 0 NA C coding 318 954 348 1301 PB.6998.12 chr12 + 1486 13 novel_in_catalog PCBP2 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 1279 None 7 4 1 FALSE 0 0 NA C coding 322 966 348 1313 PB.6998.11 chr12 + 1799 15 full-splice_match PCBP2 ENST00000552296.6 1342 15 -263 -194 no_subtype FALSE canonical NA NA 1396 None 28 3 0 FALSE 0 0 NA C coding 361 1083 348 1430 PB.6335.1 chr11 + 1650 8 full-splice_match TMX2 ENST00000278422.8 1631 8 -23 4 no_subtype FALSE canonical NA NA 779 None 12 7 0 FALSE 0 0 NA C coding 296 888 36 923 PB.6998.17 chr12 + 1583 15 novel_not_in_catalog PCBP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1375 None 2 7 1 FALSE 0 0 NA C coding 354 1062 348 1409 PB.4829.1 chr8 + 3663 21 novel_not_in_catalog CCAR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2840 None 32 5 1 FALSE 0 0 NA B coding 365 1095 1788 2882 PB.4829.2 chr8 + 3725 21 novel_not_in_catalog CCAR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2900 None 61 7 2 FALSE 0 0 NA B coding 365 1095 1848 2942 PB.3927.1 chr6 + 1476 9 novel_not_in_catalog RPL7L1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1092 None 29 8 2 TRUE 0 0 NA A coding 246 738 13 750 PB.2962.4 chr4 + 1427 1 genic_intron novelGene_863 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6998.19 chr12 + 1567 14 novel_in_catalog PCBP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1360 None 8 5 1 FALSE 0 0 NA C coding 349 1047 348 1394 PB.6998.18 chr12 + 1523 14 full-splice_match PCBP2 ENST00000359282.9 1730 14 3 204 no_subtype FALSE canonical NA NA 1306 None 9 5 2 FALSE 0 0 NA C coding 331 993 348 1340 PB.10244.1 chr20 + 3151 13 full-splice_match HSPA12B ENST00000254963.6 3151 13 -10 10 no_subtype FALSE canonical NA NA 1560 None 10 10 0 FALSE 0 0 NA A coding 686 2058 156 2213 PB.8013.1 chr15 - 1494 5 full-splice_match NDUFAF1 ENST00000260361.8 1461 5 -44 11 no_subtype FALSE canonical NA NA 345 None 8 3 0 FALSE 0 0 NA A coding 327 981 427 1407 PB.4103.1 chr6 - 2852 13 full-splice_match CEP85L ENST00000368491.7 7673 13 362 4459 no_subtype FALSE canonical NA NA 333 None 7 4 0 FALSE 0 0 NA C coding 805 2415 261 2675 PB.4103.3 chr6 - 1394 1 genic_intron novelGene_1043 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4103.2 chr6 - 1972 8 incomplete-splice_match CEP85L ENST00000368491.7 7673 13 354 5347 internal_fragment FALSE canonical NA NA 341 None 2 1 0 FALSE 0 0 NA C coding 568 1704 269 1972 PB.4590.1 chr7 - 2602 5 novel_not_in_catalog ATXN7L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 110 None 2 14 1 TRUE 0 0 NA A coding 118 354 14 367 PB.2247.1 chr3 + 2795 22 full-splice_match ITIH3 ENST00000449956.2 3007 22 -4 216 no_subtype TRUE canonical NA NA 2553 None 9 2 0 FALSE 0 0 NA A coding 890 2670 11 2680 PB.6528.1 chr11 - 1602 1 antisense novelGene_POLD3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5764.1 chr10 - 3191 2 novel_not_in_catalog MARCH8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2806 None 8 15 1 TRUE 0 0 NA A coding 92 276 19 294 PB.1743.1 chr2 + 2677 1 antisense novelGene_SLC40A1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5969.1 chr10 + 4028 1 incomplete-splice_match SCD ENST00000370355.2 5362 6 1324 11 no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A coding 119 357 1797 2153 PB.3882.1 chr6 + 2856 8 full-splice_match KCTD20 ENST00000373731.6 5619 8 271 2492 no_subtype TRUE canonical NA NA 1087 None 26 9 0 FALSE 0 0 NA C coding 419 1257 121 1377 PB.3093.8 chr4 - 1463 1 genic_intron novelGene_1251 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3882.3 chr6 + 4275 9 novel_not_in_catalog KCTD20 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4147 None 2 29 1 TRUE 0 0 NA C coding 419 1257 113 1369 PB.2189.1 chr3 - 5601 34 novel_not_in_catalog LAMB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 38 None 2 2 0 TRUE 0 0 NA A coding 1798 5394 95 5488 PB.3643.2 chr5 + 1297 11 full-splice_match NPM1 ENST00000296930.9 1758 11 206 255 no_subtype FALSE canonical NA NA 941 None 126 3 0 FALSE 0 0 NA C coding 288 864 114 977 PB.6317.1 chr11 - 2354 4 full-splice_match KBTBD4 ENST00000430070.6 2372 4 46 -28 no_subtype FALSE canonical NA NA 37 None 2 1 0 FALSE 0 0 NA A coding 534 1602 19 1620 PB.4347.3 chr7 - 1677 13 novel_not_in_catalog CPVL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 108 None 4 1 0 TRUE 0 0 NA C coding 446 1338 131 1468 PB.4347.2 chr7 - 1601 13 novel_not_in_catalog CPVL novel NA NA NA NA no_subtype FALSE canonical NA NA 122 None 13 1 1 FALSE 0 0 NA C coding 472 1416 145 1560 PB.4347.1 chr7 - 1673 13 full-splice_match CPVL ENST00000265394.9 2091 13 2 416 no_subtype FALSE canonical NA NA 107 None 50 2 0 FALSE 0 0 NA C coding 472 1416 130 1545 PB.5495.4 chr9 + 2559 10 full-splice_match NEK6 ENST00000546191.5 2580 10 19 2 no_subtype FALSE canonical NA NA 959 None 2 9 1 FALSE 0 0 NA C coding 313 939 129 1067 PB.1983.5 chr3 + 2705 1 novel_in_catalog MTMR14 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 25 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1983.2 chr3 + 2416 19 full-splice_match MTMR14 ENST00000296003.8 2494 19 45 33 no_subtype FALSE canonical NA NA 1846 None 7 3 0 FALSE 0 0 NA C coding 650 1950 78 2027 PB.7879.1 chr14 + 864 2 full-splice_match TMEM251 ENST00000283534.4 909 2 41 4 no_subtype FALSE canonical NA NA 41 None 2 2 0 FALSE 0 0 NA A coding 131 393 58 450 PB.3387.1 chr5 + 1710 2 genic_intron novelGene_880 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 37 None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1983.1 chr3 + 2806 20 novel_not_in_catalog MTMR14 novel NA NA NA NA no_subtype TRUE canonical NA NA 2211 None 2 12 0 TRUE 0 0 NA C coding 590 1770 117 1886 PB.2771.2 chr4 - 2676 14 full-splice_match DHX15 ENST00000336812.4 2994 14 41 277 no_subtype FALSE canonical NA NA 187 None 182 0 0 FALSE 0 0 NA C coding 795 2385 117 2501 PB.2771.1 chr4 - 3634 16 novel_not_in_catalog DHX15 novel NA NA NA NA no_subtype TRUE canonical NA NA 200 None 3 11 1 TRUE 0 0 NA C coding 795 2385 130 2514 PB.10549.2 chr21 - 1596 2 genic_intron novelGene_340 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1366 None 2 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8288.1 chr15 + 3749 15 full-splice_match SEMA4B ENST00000332496.10 3781 15 -7 39 no_subtype TRUE canonical NA NA 2021 None 5 8 0 FALSE 0 0 NA C coding 837 2511 248 2758 PB.3083.1 chr4 + 2874 1 genic_intron novelGene_1239 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8288.3 chr15 + 2160 1 full-splice_match RPS12P26 ENST00000492017.3 396 1 -483 -1281 no_subtype FALSE canonical NA NA NA None 4 13 0 FALSE 0 0 NA A coding 11 33 343 375 PB.8288.2 chr15 + 3514 14 full-splice_match SEMA4B ENST00000411539.6 3807 14 249 44 no_subtype FALSE canonical NA NA 1785 None 17 8 0 FALSE 0 0 NA C coding 832 2496 27 2522 PB.8288.4 chr15 + 3371 13 novel_in_catalog SEMA4B novel NA NA NA NA no_combination_of_known_junctions TRUE canonical NA NA 1643 None 2 29 0 FALSE 0 0 NA C coding 535 1605 52 1656 PB.8288.7 chr15 + 3494 2 genic SEMA4B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 320 None 2 16 0 TRUE 0 0 NA C coding 252 756 1388 2143 PB.3804.2 chr6 - 1641 11 full-splice_match DDX39B ENST00000396172.5 2133 11 448 44 no_subtype FALSE canonical NA NA 51 None 53 0 0 FALSE 0 0 NA C coding 428 1284 184 1467 PB.3804.3 chr6 - 3968 10 full-splice_match DDX39B ENST00000462256.5 4027 10 25 34 no_subtype FALSE canonical NA NA 43 None 2 10 0 FALSE 0 0 NA C coding 290 870 46 915 PB.3804.1 chr6 - 4156 10 novel_in_catalog DDX39B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 102 None 25 11 0 FALSE 0 0 NA C coding 290 870 235 1104 PB.6839.1 chr12 + 1791 2 full-splice_match GPRC5A ENST00000537783.1 1740 2 6 -57 no_subtype FALSE canonical NA NA 100 None 2 3 0 FALSE 0 0 NA C coding 343 1029 108 1136 PB.3804.7 chr6 - 2882 1 novel_in_catalog DDX39B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6839.2 chr12 + 1807 3 novel_not_in_catalog GPRC5A novel NA NA NA NA no_subtype FALSE canonical NA NA 603 None 2 9 0 FALSE 0 0 NA C coding 199 597 91 687 PB.7922.1 chr14 - 1935 11 full-splice_match WARS ENST00000355338.6 3092 11 495 662 no_subtype FALSE canonical NA NA 51 None 94 5 1 FALSE 0 0 NA C coding 471 1413 125 1537 PB.10236.6 chr20 + 2896 22 novel_not_in_catalog VPS16 novel NA NA NA NA no_subtype FALSE canonical NA NA 2596 None 4 6 1 FALSE 0 0 NA C coding 585 1755 47 1801 PB.3558.4 chr5 - 1607 4 incomplete-splice_match NR3C1 ENST00000503201.1 2594 9 43 944 internal_fragment FALSE canonical NA NA 126 None 17 1 0 FALSE 0 0 NA C coding 489 1467 140 1606 PB.3558.6 chr5 - 1510 4 incomplete-splice_match NR3C1 ENST00000415690.6 3789 9 90 2189 internal_fragment FALSE canonical NA NA 29 None 2 0 0 FALSE 0 0 NA C coding 489 1467 43 1509 PB.5961.1 chr10 - 3777 1 novel_in_catalog GOT1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5.1 chr1 - 1267 7 full-splice_match UBE2J2 ENST00000349431.10 1733 7 32 434 no_subtype FALSE canonical NA NA 188 None 3 3 0 FALSE 0 0 NA A coding 259 777 189 965 PB.1533.1 chr2 + 1371 7 novel_not_in_catalog CD8BP novel NA NA NA NA no_subtype FALSE canonical NA NA 641 None 40 1 0 TRUE 0 0 NA B coding 210 630 22 651 PB.3558.2 chr5 - 6137 9 full-splice_match NR3C1 ENST00000503201.1 2594 9 78 -3621 no_subtype FALSE canonical NA NA 91 None 2 21 0 FALSE 0 0 NA C coding 777 2331 105 2435 PB.5305.1 chr9 - 2926 1 novel_in_catalog SLC25A51 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3425.1 chr5 - 3754 3 full-splice_match FEM1C ENST00000274457.4 5816 3 222 1840 no_subtype FALSE canonical NA NA 150 None 4 7 0 FALSE 0 0 NA A coding 617 1851 341 2191 PB.8728.1 chr16 + 1919 1 antisense novelGene_PHLPP2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2463.2 chr3 - 2908 7 novel_not_in_catalog CNBP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 111 None 17 13 1 TRUE 0 0 NA B coding 177 531 126 656 PB.981.2 chr1 + 1064 1 genic_intron novelGene_1381 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 1 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8003.1 chr15 + 3133 3 novel_not_in_catalog GCHFR novel NA NA NA NA no_subtype FALSE non_canonical NA NA 272 None 3 17 0 TRUE 0 0 NA A coding 175 525 1187 1711 PB.11214.6 chrX - 3496 11 novel_not_in_catalog G6PD novel NA NA NA NA no_subtype FALSE canonical NA NA 55 None 3 11 2 TRUE 0 0 NA B coding 162 486 64 549 PB.9641.3 chr19 + 3120 8 novel_not_in_catalog CIRBP novel NA NA NA NA no_subtype FALSE canonical NA NA 2964 None 2 26 1 FALSE 0 0 NA C coding 293 879 86 964 PB.9641.2 chr19 + 3133 8 novel_not_in_catalog CIRBP novel NA NA NA NA no_subtype FALSE canonical NA NA 2977 None 97 16 0 FALSE 0 0 NA C coding 143 429 83 511 PB.9641.1 chr19 + 1323 8 novel_in_catalog CIRBP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 584 None 11 6 0 FALSE 0 0 NA C coding 172 516 83 598 PB.3876.2 chr6 + 3419 14 novel_not_in_catalog MAPK14 novel NA NA NA NA no_subtype FALSE canonical NA NA 1047 None 3 15 0 TRUE 0 0 NA B coding 283 849 264 1112 PB.9641.7 chr19 + 2537 8 novel_in_catalog CIRBP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2382 None 2 9 0 FALSE 0 0 NA C coding 297 891 83 973 PB.9641.6 chr19 + 1702 6 full-splice_match CIRBP ENST00000587896.5 1081 6 -2 -619 no_subtype FALSE canonical NA NA 513 None 2 8 0 FALSE 0 0 NA C coding 297 891 83 973 PB.9641.5 chr19 + 2541 9 novel_in_catalog CIRBP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2385 None 2 9 0 FALSE 0 0 NA C coding 297 891 86 976 PB.9641.4 chr19 + 2165 10 novel_in_catalog CIRBP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2010 None 3 8 0 FALSE 0 0 NA C coding 172 516 86 601 PB.3058.1 chr4 - 3990 15 incomplete-splice_match TBC1D9 ENST00000442267.2 5306 21 1294 22 5prime_fragment TRUE canonical NA NA 47 None 2 7 0 FALSE 0 0 NA A coding 803 2409 171 2579 PB.9641.9 chr19 + 3148 8 novel_not_in_catalog CIRBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2992 None 3 20 1 TRUE 0 0 NA C coding 148 444 83 526 PB.9641.8 chr19 + 3321 8 novel_not_in_catalog CIRBP novel NA NA NA NA no_subtype FALSE canonical NA NA 3129 None 3 36 1 TRUE 0 0 NA C coding 297 891 83 973 PB.6728.2 chr11 + 1723 11 full-splice_match ST3GAL4 ENST00000444328.6 1812 11 84 5 no_subtype FALSE canonical NA NA 1050 None 2 1 0 FALSE 0 0 NA C coding 333 999 136 1134 PB.1917.1 chr2 + 1197 5 full-splice_match PTMA ENST00000409115.7 1221 5 17 7 no_subtype FALSE canonical NA NA 466 None 159 4 0 FALSE 0 0 NA C coding 110 330 182 511 PB.2458.2 chr3 + 2739 5 novel_in_catalog RAB7A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1682 None 6 9 0 FALSE 0 0 NA C coding 220 660 203 862 PB.2458.3 chr3 + 3088 3 genic_intron novelGene_1114 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 547 None 2 32 0 FALSE 0 0 NA A coding 105 315 194 508 PB.7978.1 chr15 + 4718 13 novel_not_in_catalog ARHGAP11A novel NA NA NA NA no_subtype FALSE canonical NA NA 4053 None 2 21 2 TRUE 0 0 NA A coding 1023 3069 737 3805 PB.2534.1 chr3 + 2856 3 full-splice_match EIF2A ENST00000463863.5 565 3 101 -2392 no_subtype FALSE canonical NA NA 122 None 4 23 0 FALSE 0 0 NA C coding 95 285 25 309 PB.2463.8 chr3 - 1540 5 novel_in_catalog CNBP novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 135 None 125 4 0 FALSE 0 0 NA B coding 172 516 150 665 PB.7553.3 chr13 + 3351 2 antisense novelGene_GPR18_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 2582 None 4 23 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2073.2 chr3 + 2702 16 full-splice_match STT3B ENST00000295770.3 4248 16 157 1389 no_subtype FALSE canonical NA NA 2452 None 7 3 0 FALSE 0 0 NA C coding 826 2478 53 2530 PB.8581.1 chr16 + 1779 11 full-splice_match TGFB1I1 ENST00000394863.7 1898 11 116 3 no_subtype FALSE canonical NA NA 1133 None 27 4 1 FALSE 0 0 NA A coding 461 1383 15 1397 PB.5610.2 chr9 - 3112 13 novel_not_in_catalog BRD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 112 None 33 4 0 TRUE 0 0 NA B coding 726 2178 226 2403 PB.9605.1 chr18 + 5716 10 novel_not_in_catalog ZNF407 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5574 None 2 8 1 TRUE 0 0 NA A coding 1500 4500 79 4578 PB.8720.2 chr16 - 2795 19 full-splice_match COG4 ENST00000323786.9 2833 19 26 12 no_subtype FALSE canonical NA NA 167 None 36 2 0 FALSE 0 0 NA C coding 785 2355 9 2363 PB.8720.1 chr16 - 2886 20 novel_not_in_catalog COG4 novel NA NA NA NA no_subtype FALSE canonical NA NA 167 None 2 3 0 TRUE 0 0 NA C coding 813 2439 9 2447 PB.9904.11 chr19 - 2579 18 incomplete-splice_match ATP13A1 ENST00000291503.9 3483 26 899 5 5prime_fragment FALSE canonical NA NA 16 None 4 1 0 FALSE 0 0 NA B coding 692 2076 284 2359 PB.9904.10 chr19 - 2810 21 novel_in_catalog ATP13A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 24 None 2 20 5 FALSE 0 0 NA B coding 572 1716 875 2590 PB.2962.1 chr4 + 2688 13 full-splice_match PDLIM5 ENST00000317968.8 6083 13 35 3360 no_subtype FALSE canonical NA NA 1802 None 27 5 0 FALSE 0 0 NA C coding 596 1788 102 1889 PB.10733.1 chr22 - 1871 15 full-splice_match EIF3D ENST00000216190.12 2155 15 273 11 no_subtype TRUE canonical NA NA 88 None 73 1 0 FALSE 0 0 NA C coding 548 1644 99 1742 PB.10045.2 chr19 + 2701 10 fusion PVR,CEACAM19 novel NA NA NA NA no_subtype FALSE canonical NA NA 2115 None 4 31 1 TRUE 0 0 NA A coding 405 1215 184 1398 PB.10733.3 chr22 - 1946 16 novel_in_catalog EIF3D novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 88 None 2 1 0 FALSE 0 0 NA C coding 548 1644 185 1828 PB.5670.2 chr10 + 3425 12 novel_not_in_catalog ATP5C1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2196 None 2 28 5 TRUE 0 0 NA C coding 297 891 29 919 PB.5670.1 chr10 + 1093 10 full-splice_match ATP5C1 ENST00000356708.11 1163 10 46 24 no_subtype TRUE canonical NA NA 960 None 13 1 0 FALSE 0 0 NA C coding 298 894 34 927 PB.6825.1 chr12 + 1836 4 full-splice_match GABARAPL1 ENST00000266458.9 1957 4 112 9 no_subtype FALSE canonical NA NA 501 None 8 5 0 FALSE 0 0 NA A coding 117 351 214 564 PB.10158.1 chr19 - 3410 5 full-splice_match ZNF347 ENST00000334197.11 7960 5 -22 4572 no_subtype FALSE canonical NA NA 45 None 4 5 1 FALSE 0 0 NA A coding 839 2517 92 2608 PB.6973.1 chr12 - 1431 1 antisense novelGene_METTL7A_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7902.1 chr14 + 2138 2 antisense novelGene_BCL11B_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 20 None 2 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7902.2 chr14 + 1441 1 antisense novelGene_BCL11B_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.40.1 chr1 - 2987 4 full-splice_match ERRFI1 ENST00000377482.9 3104 4 105 12 no_subtype FALSE canonical NA NA 46 None 31 4 0 FALSE 0 0 NA A coding 462 1386 120 1505 PB.2713.3 chr4 + 3394 1 novel_in_catalog RNF4 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 21 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2713.1 chr4 + 2653 8 full-splice_match RNF4 ENST00000502316.5 855 8 37 -1835 no_subtype FALSE canonical NA NA 676 None 292 10 0 FALSE 0 0 NA C coding 190 570 254 823 PB.2713.4 chr4 + 2763 7 novel_in_catalog RNF4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 583 None 2 12 0 FALSE 0 0 NA C coding 190 570 161 730 PB.2713.5 chr4 + 5610 8 novel_not_in_catalog RNF4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3430 None 3 29 3 TRUE 0 0 NA C coding 116 348 3753 4100 PB.3431.2 chr5 - 3560 3 genic_intron novelGene_1031 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 252 None 2 39 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.8887.1 chr17 - 1400 9 novel_not_in_catalog CLEC10A novel NA NA NA NA no_subtype FALSE canonical NA NA 242 None 39 6 2 FALSE 0 0 NA A coding 289 867 276 1142 PB.3431.1 chr5 - 4212 20 novel_not_in_catalog SEMA6A novel NA NA NA NA no_subtype FALSE canonical NA NA 586 None 3 13 0 TRUE 0 0 NA A coding 1030 3090 625 3714 PB.175.1 chr1 + 1306 1 full-splice_match SFN ENST00000339276.5 1320 1 11 3 no_subtype FALSE canonical NA NA NA None 4 4 0 FALSE 0 0 NA A coding 248 744 65 808 PB.3017.1 chr4 + 2702 3 novel_not_in_catalog SYNPO2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1716 None 2 18 1 TRUE 0 0 NA B coding 135 405 567 971 PB.5882.2 chr10 + 2443 8 incomplete-splice_match CCSER2 ENST00000372088.6 7657 10 1 5213 3prime_fragment FALSE canonical NA NA 2406 None 3 0 0 FALSE 0 0 NA B coding 728 2184 259 2442 PB.10829.1 chr22 + 1637 11 full-splice_match TRMU ENST00000290846.8 1940 11 296 7 no_subtype FALSE canonical NA NA 1145 None 2 4 0 FALSE 0 0 NA A coding 421 1263 45 1307 PB.9673.1 chr19 - 2366 3 full-splice_match TBXA2R ENST00000375190.8 2608 3 -28 270 no_subtype FALSE canonical NA NA 339 None 3 8 0 FALSE 0 0 NA A coding 343 1029 423 1451 PB.6042.1 chr10 - 2987 4 antisense novelGene_TRUB1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2708 None 16 22 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5858.2 chr10 + 3699 6 novel_in_catalog SAMD8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1081 None 5 29 0 FALSE 0 0 NA C coding 415 1245 139 1383 PB.10503.2 chr21 - 1877 9 novel_not_in_catalog SAMSN1 novel NA NA NA NA no_subtype TRUE canonical NA NA 131 None 13 5 0 TRUE 0 0 NA A coding 373 1119 75 1193 PB.5541.2 chr9 + 2941 14 novel_not_in_catalog SLC27A4 novel NA NA NA NA no_subtype FALSE canonical NA NA 2053 None 15 5 1 FALSE 0 0 NA B coding 643 1929 280 2208 PB.5812.1 chr10 + 3503 7 genic VPS26A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2919 None 4 30 5 TRUE 0 0 NA B non_coding NA NA NA NA PB.5812.3 chr10 + 2412 1 genic_intron novelGene_657 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5812.2 chr10 + 1208 3 full-splice_match SRGN ENST00000242465.3 1208 3 -6 6 no_subtype FALSE canonical NA NA 273 None 33 8 1 FALSE 0 0 NA A coding 157 471 50 520 PB.1654.1 chr2 - 1467 8 full-splice_match CYTIP ENST00000264192.7 2260 8 84 709 no_subtype FALSE canonical NA NA 212 None 28 3 0 FALSE 0 0 NA C coding 359 1077 39 1115 PB.3276.1 chr5 - 2618 1 incomplete-splice_match ELOVL7 ENST00000425382.5 3827 8 1203 7 no_subtype FALSE canonical NA NA NA None 4 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5903.1 chr10 + 1732 2 full-splice_match IFIT1 ENST00000371804.3 1880 2 140 8 no_subtype FALSE canonical NA NA 32 None 77 3 0 FALSE 0 0 NA A coding 478 1434 28 1461 PB.9272.1 chr17 + 3236 1 novel_in_catalog VMP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 25 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1421.2 chr2 + 3144 2 novel_not_in_catalog ACTG2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1718 None 21 12 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.9272.3 chr17 + 2227 1 full-splice_match VMP1 ENST00000592790.1 4325 1 71 2027 no_subtype FALSE canonical NA NA NA None 4 14 0 FALSE 0 0 NA C coding 124 372 934 1305 PB.9272.2 chr17 + 1983 12 full-splice_match VMP1 ENST00000262291.8 2712 12 225 504 no_subtype FALSE canonical NA NA 1162 None 30 1 0 FALSE 0 0 NA C coding 406 1218 86 1303 PB.2962.3 chr4 + 2791 1 genic_intron novelGene_862 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10182.1 chr19 + 3020 4 full-splice_match ZNF805 ENST00000414468.2 1884 4 -206 -930 no_subtype FALSE canonical NA NA 459 None 6 16 0 FALSE 0 0 NA A coding 625 1875 213 2087 PB.5678.1 chr10 - 3437 4 novel_not_in_catalog UPF2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 204 None 3 19 3 TRUE 0 0 NA A coding 113 339 1213 1551 PB.7141.1 chr12 + 3267 15 novel_not_in_catalog TMTC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2138 None 2 3 0 TRUE 0 0 NA B coding 914 2742 206 2947 PB.10527.1 chr21 - 4015 20 full-splice_match SCAF4 ENST00000399804.5 4127 20 -43 155 no_subtype FALSE canonical NA NA 456 None 2 13 0 FALSE 0 0 NA C coding 1125 3375 427 3801 PB.2570.1 chr3 - 1626 2 genic_intron novelGene_1297 novel NA NA NA NA no_subtype FALSE canonical NA NA 457 None 2 5 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7307.12 chr12 - 3761 12 full-splice_match PXN ENST00000228307.11 3785 12 16 8 no_subtype FALSE canonical NA NA 139 None 29 10 0 FALSE 0 0 NA C coding 591 1773 127 1899 PB.10527.2 chr21 - 3891 20 full-splice_match SCAF4 ENST00000286835.11 4193 20 94 208 no_subtype FALSE canonical NA NA 319 None 2 8 0 FALSE 0 0 NA C coding 1147 3441 290 3730 PB.5836.3 chr10 + 1792 3 novel_not_in_catalog DDIT4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 460 None 2 15 1 TRUE 0 0 NA C coding 232 696 256 951 PB.5836.2 chr10 + 1664 3 full-splice_match DDIT4 ENST00000307365.3 1748 3 75 9 no_subtype FALSE canonical NA NA 331 None 31 6 0 FALSE 0 0 NA C coding 232 696 127 822 PB.5836.1 chr10 + 1791 2 full-splice_match DDIT4 ENST00000473155.1 753 2 40 -1078 no_subtype FALSE canonical NA NA 457 None 22 7 0 FALSE 0 0 NA C coding 232 696 253 948 PB.9395.2 chr17 + 2557 14 novel_not_in_catalog MFSD11 novel NA NA NA NA no_subtype TRUE canonical NA NA 1491 None 3 9 1 TRUE 0 0 NA C coding 449 1347 307 1653 PB.9141.2 chr17 - 4601 20 novel_in_catalog EZH1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 92 None 2 14 1 FALSE 0 0 NA A coding 747 2241 104 2344 PB.10370.3 chr20 - 2896 2 novel_in_catalog TTI1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2345 None 4 2 0 FALSE 0 0 NA C coding 841 2523 44 2566 PB.10370.1 chr20 - 3793 8 full-splice_match TTI1 ENST00000373447.7 3825 8 8 24 no_subtype FALSE canonical NA NA 57 None 63 11 0 FALSE 0 0 NA C coding 1089 3267 99 3365 PB.5606.2 chr9 - 3052 9 novel_in_catalog SLC2A6 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 841 None 5 6 1 FALSE 0 0 NA B coding 301 903 1209 2111 PB.5606.3 chr9 - 2839 10 novel_not_in_catalog SLC2A6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 127 None 19 6 0 FALSE 0 0 NA B coding 301 903 1000 1902 PB.5606.4 chr9 - 3114 9 novel_not_in_catalog SLC2A6 novel NA NA NA NA no_subtype FALSE canonical NA NA 127 None 2 10 0 FALSE 0 0 NA B coding 226 678 1499 2176 PB.5606.5 chr9 - 2769 10 novel_not_in_catalog SLC2A6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 129 None 2 14 1 FALSE 0 0 NA B coding 223 669 38 706 PB.4064.1 chr6 - 1467 2 genic_intron novelGene_976 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1445 None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7339.1 chr12 - 2568 15 novel_not_in_catalog VPS33A novel NA NA NA NA no_subtype TRUE canonical NA NA 199 None 5 3 0 TRUE 0 0 NA B coding 596 1788 98 1885 PB.10723.1 chr22 + 1407 6 incomplete-splice_match HMGXB4 ENST00000418170.5 4216 12 5 2804 3prime_fragment FALSE canonical NA NA 508 None 2 0 0 FALSE 0 0 NA A coding 277 831 577 1407 PB.2414.1 chr3 - 2032 14 full-splice_match HCLS1 ENST00000314583.7 2000 14 -36 4 no_subtype FALSE canonical NA NA 128 None 143 4 1 FALSE 0 0 NA A coding 486 1458 129 1586 PB.8341.9 chr16 + 3034 14 novel_not_in_catalog FAM234A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1726 None 3 20 3 TRUE 0 0 NA C coding 472 1416 520 1935 PB.8341.8 chr16 + 3240 12 novel_not_in_catalog FAM234A novel NA NA NA NA no_subtype FALSE canonical NA NA 1968 None 3 19 1 TRUE 0 0 NA C coding 221 663 1515 2177 PB.8341.5 chr16 + 3367 13 novel_not_in_catalog FAM234A novel NA NA NA NA no_subtype FALSE canonical NA NA 2059 None 2 22 1 TRUE 0 0 NA C coding 221 663 1606 2268 PB.8341.4 chr16 + 3137 17 novel_not_in_catalog FAM234A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1864 None 2 15 3 TRUE 0 0 NA C coding 472 1416 658 2073 PB.8341.7 chr16 + 1839 13 novel_not_in_catalog FAM234A novel NA NA NA NA no_subtype FALSE canonical NA NA 1686 None 2 1 0 FALSE 0 0 NA C coding 471 1413 382 1794 PB.7829.2 chr14 + 1583 11 novel_not_in_catalog GPATCH2L novel NA NA NA NA no_subtype FALSE canonical NA NA 1346 None 2 1 0 TRUE 0 0 NA B coding 472 1416 59 1474 PB.8341.1 chr16 + 2950 13 full-splice_match FAM234A ENST00000399932.7 3213 13 256 7 no_subtype FALSE canonical NA NA 1642 None 11 11 0 FALSE 0 0 NA C coding 472 1416 436 1851 PB.7374.1 chr12 + 2759 1 incomplete-splice_match FBRSL1 ENST00000542061.2 3175 4 409 8 no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA A coding 115 345 913 1257 PB.8341.3 chr16 + 3026 16 novel_not_in_catalog FAM234A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1753 None 2 13 3 TRUE 0 0 NA C coding 472 1416 547 1962 PB.8341.2 chr16 + 2975 14 novel_not_in_catalog FAM234A novel NA NA NA NA no_subtype FALSE canonical NA NA 1704 None 40 9 0 FALSE 0 0 NA C coding 472 1416 498 1913 PB.6074.1 chr10 - 2105 12 novel_not_in_catalog OAT novel NA NA NA NA no_subtype FALSE canonical NA NA 49 None 32 7 1 TRUE 0 0 NA A coding 439 1317 166 1482 PB.583.2 chr1 - 3523 22 novel_not_in_catalog PTPN22 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 165 None 2 11 2 TRUE 0 0 NA B coding 413 1239 1203 2441 PB.4908.1 chr8 + 4173 21 novel_not_in_catalog HGSNAT novel NA NA NA NA no_subtype TRUE canonical NA NA 2929 None 7 17 1 TRUE 0 0 NA A coding 635 1905 24 1928 PB.7597.1 chr14 + 1400 2 full-splice_match RNASE4 ENST00000555835.2 2520 2 491 629 no_subtype FALSE canonical NA NA 168 None 85 5 0 FALSE 0 0 NA A coding 147 441 186 626 PB.9657.1 chr19 - 1644 3 full-splice_match TIMM13 ENST00000215570.7 1973 3 303 26 no_subtype FALSE canonical NA NA 178 None 6 11 0 FALSE 0 0 NA A coding 64 192 412 603 PB.2845.1 chr4 - 2209 6 full-splice_match CHIC2 ENST00000263921.7 1194 6 61 -1076 no_subtype FALSE canonical NA NA 448 None 9 8 0 FALSE 0 0 NA C coding 165 495 330 824 PB.2845.2 chr4 - 2546 5 novel_in_catalog CHIC2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 513 None 2 10 0 FALSE 0 0 NA C coding 151 453 395 847 PB.4417.4 chr7 + 6145 8 novel_not_in_catalog UPP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 5947 None 2 37 1 TRUE 0 0 NA C coding 103 309 5776 6084 PB.4417.3 chr7 + 3644 11 novel_not_in_catalog UPP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3447 None 2 21 2 TRUE 0 0 NA C coding 103 309 3276 3584 PB.4417.2 chr7 + 2701 8 novel_in_catalog UPP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2497 None 6 18 0 FALSE 0 0 NA C coding 211 633 2002 2634 PB.4417.1 chr7 + 1700 9 full-splice_match UPP1 ENST00000395564.8 1375 9 -10 -315 no_subtype FALSE canonical NA NA 1183 None 34 4 0 FALSE 0 0 NA C coding 310 930 391 1320 PB.10872.1 chrX + 3501 23 full-splice_match OFD1 ENST00000340096.10 3611 23 -22 132 no_subtype FALSE canonical NA NA 3345 None 2 1 0 FALSE 0 0 NA A coding 1011 3033 353 3385 PB.8114.1 chr15 - 2999 1 antisense novelGene_AQP9_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6355.1 chr11 + 2075 4 full-splice_match TMEM109 ENST00000227525.7 2413 4 303 35 no_subtype FALSE canonical NA NA 440 None 37 4 0 FALSE 0 0 NA C coding 243 729 101 829 PB.6355.2 chr11 + 1603 1 incomplete-splice_match TMEM109 ENST00000227525.7 2413 4 807 4 no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA C coding 68 204 122 325 PB.9734.2 chr19 + 1408 4 novel_in_catalog RAB11B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 384 None 5 9 0 FALSE 0 0 NA C coding 99 297 231 527 PB.11002.1 chrX - 2745 3 full-splice_match LINC01278 ENST00000609143.5 2768 3 18 5 no_subtype FALSE canonical NA NA 200 None 2 12 0 FALSE 0 0 NA A coding 118 354 2392 2745 PB.8361.1 chr16 - 1234 6 full-splice_match TSR3 ENST00000007390.2 1243 6 5 4 no_subtype FALSE canonical NA NA 214 None 2 1 0 FALSE 0 0 NA A coding 312 936 103 1038 PB.9734.1 chr19 + 1540 5 full-splice_match RAB11B ENST00000328024.10 1751 5 204 7 no_subtype FALSE canonical NA NA 525 None 119 9 0 FALSE 0 0 NA C coding 218 654 15 668 PB.6810.2 chr12 + 2853 7 novel_in_catalog NECAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 691 None 2 5 0 FALSE 0 0 NA C coding 260 780 16 795 PB.6810.3 chr12 + 2944 6 novel_in_catalog NECAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 775 None 3 5 0 FALSE 0 0 NA C coding 192 576 13 588 PB.6810.1 chr12 + 2515 8 full-splice_match NECAP1 ENST00000339754.9 2587 8 73 -1 no_subtype FALSE canonical NA NA 784 None 17 4 0 FALSE 0 0 NA C coding 275 825 6 830 PB.6810.4 chr12 + 2695 7 novel_not_in_catalog NECAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 969 None 2 13 1 FALSE 0 0 NA C coding 192 576 6 581 PB.8077.1 chr15 + 2995 1 novel_in_catalog DTWD1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5808.1 chr10 + 2481 18 incomplete-splice_match CCAR1 ENST00000265872.10 4683 25 29 2173 3prime_fragment FALSE canonical NA NA 2388 None 11 1 0 FALSE 0 0 NA B coding 797 2391 91 2481 PB.1845.12 chr2 - 5915 34 incomplete-splice_match FN1 ENST00000336916.8 8435 46 2107 413 5prime_fragment FALSE canonical NA NA 100 None 2 8 0 FALSE 0 0 NA C coding 1430 4290 935 5224 PB.5808.3 chr10 + 2881 3 novel_not_in_catalog CCAR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1974 None 6 23 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.5825.1 chr10 + 4121 21 novel_not_in_catalog PALD1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2704 None 2 12 0 TRUE 0 0 NA A coding 856 2568 287 2854 PB.10929.2 chrX + 1917 15 full-splice_match MAOA ENST00000338702.3 4015 15 83 2015 no_subtype FALSE canonical NA NA 1477 None 68 1 0 FALSE 0 0 NA C coding 527 1581 41 1621 PB.22.1 chr1 + 1530 3 genic DFFB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1507 None 2 11 1 TRUE 0 0 NA A coding 135 405 544 948 PB.3943.1 chr6 - 2913 1 novel_in_catalog MRPS18A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9169.4 chr17 + 2598 12 novel_in_catalog GRN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2157 None 9 2 0 FALSE 0 0 NA C coding 496 1488 805 2292 PB.9129.1 chr17 - 1633 6 full-splice_match RAB5C ENST00000346213.8 1671 6 27 11 no_subtype FALSE canonical NA NA 98 None 71 4 0 FALSE 0 0 NA A coding 216 648 187 834 PB.7080.1 chr12 - 1747 1 full-splice_match RP11-114F3.4 ENST00000610945.1 1311 1 823 -1259 no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1205.1 chr2 - 1410 7 full-splice_match LAPTM4A ENST00000175091.4 1765 7 350 5 no_subtype FALSE canonical NA NA 269 None 68 6 0 FALSE 0 0 NA A coding 233 699 159 857 PB.2180.1 chr3 + 2104 16 full-splice_match ARIH2 ENST00000356401.8 4933 16 51 2778 no_subtype FALSE canonical NA NA 1698 None 11 0 0 FALSE 0 0 NA C coding 493 1479 289 1767 PB.2180.2 chr3 + 2137 17 novel_in_catalog ARIH2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1731 None 4 1 0 FALSE 0 0 NA C coding 351 1053 748 1800 PB.2180.3 chr3 + 1693 14 novel_in_catalog ARIH2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1289 None 2 1 0 FALSE 0 0 NA C coding 351 1053 306 1358 PB.8778.1 chr16 - 2929 10 novel_not_in_catalog TLDC1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 20 2 TRUE 0 0 NA A coding 190 570 103 672 PB.234.1 chr1 + 2227 12 full-splice_match RBBP4 ENST00000373493.9 7943 12 152 5564 no_subtype FALSE canonical NA NA 1219 None 7 5 0 FALSE 0 0 NA C coding 425 1275 8 1282 PB.234.2 chr1 + 2239 14 novel_not_in_catalog RBBP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1818 None 5 6 1 TRUE 0 0 NA C coding 425 1275 28 1302 PB.6991.11 chr12 - 2980 14 novel_in_catalog ITGB7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 32 None 3 4 0 FALSE 0 0 NA C coding 359 1077 36 1112 PB.4280.1 chr7 - 3473 5 full-splice_match FBXL18 ENST00000382368.7 3498 5 -4 29 no_subtype FALSE canonical NA NA 146 None 10 6 0 FALSE 0 0 NA A coding 718 2154 129 2282 PB.7339.2 chr12 - 1522 1 novel_in_catalog VPS33A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4934.2 chr8 - 512 4 full-splice_match RPS20 ENST00000009589.7 626 4 0 114 no_subtype FALSE canonical NA NA 126 None 7 2 0 FALSE 0 0 NA A coding 119 357 124 480 PB.10581.2 chr21 + 3494 1 genic_intron novelGene_425 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 19 0 FALSE 0 0 NA A coding 115 345 432 776 PB.4196.3 chr6 + 5485 19 novel_not_in_catalog PLEKHG1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5397 None 2 4 1 TRUE 0 0 NA B coding 1385 4155 415 4569 PB.11144.1 chrX + 5836 33 novel_in_catalog STAG2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3911 None 14 9 0 FALSE 0 0 NA C coding 1231 3693 240 3932 PB.937.4 chr1 - 1963 11 novel_in_catalog UCHL5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 467 None 4 9 1 FALSE 0 0 NA C coding 204 612 764 1375 PB.937.6 chr1 - 2979 1 full-splice_match SCARNA18B ENST00000458806.1 135 1 -1917 -927 no_subtype FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA A coding 147 441 73 513 PB.1851.1 chr2 - 2432 3 novel_not_in_catalog CXCR2P1 novel NA NA NA NA no_subtype FALSE canonical NA NA 191 None 3 12 1 TRUE 0 0 NA A coding 134 402 885 1286 PB.591.1 chr1 - 1530 1 incomplete-splice_match NRAS ENST00000369535.4 4449 7 2905 15 no_subtype FALSE canonical NA NA NA None 77 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2460.1 chr3 + 3170 18 full-splice_match ACAD9 ENST00000308982.11 2454 18 19 -735 no_subtype FALSE canonical NA NA 1827 None 10 14 0 FALSE 0 0 NA C coding 621 1863 63 1925 PB.4652.2 chr7 + 3102 5 genic_intron novelGene_1117 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1461 None 3 27 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.5224.1 chr9 - 1642 1 incomplete-splice_match NFIB ENST00000543693.5 7622 11 5970 11 no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2400.1 chr3 + 3337 11 full-splice_match POGLUT1 ENST00000295588.8 3533 11 50 146 no_subtype FALSE canonical NA NA 1056 None 4 20 0 FALSE 0 0 NA C coding 392 1176 35 1210 PB.8375.1 chr16 - 939 7 full-splice_match RPS2 ENST00000343262.8 985 7 34 12 no_subtype FALSE canonical NA NA 20 None 46 1 0 FALSE 0 0 NA A coding 293 879 24 902 PB.758.1 chr1 - 2809 1 incomplete-splice_match ETV3 ENST00000368192.8 5254 5 2439 7 no_subtype FALSE canonical NA NA NA None 4 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10808.1 chr22 - 2610 16 full-splice_match ARFGAP3 ENST00000263245.9 2857 16 126 121 no_subtype FALSE canonical NA NA 163 None 75 7 0 FALSE 0 0 NA A coding 516 1548 95 1642 PB.3063.1 chr4 - 3348 1 genic_intron novelGene_1211 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A coding 229 687 548 1234 PB.758.4 chr1 - 1817 4 full-splice_match ETV3 ENST00000326786.4 1539 4 98 -376 no_subtype FALSE canonical NA NA 61 None 6 3 0 FALSE 0 0 NA C coding 143 429 75 503 PB.758.5 chr1 - 3049 4 novel_not_in_catalog ETV3 novel NA NA NA NA no_subtype FALSE canonical NA NA 64 None 7 7 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.6596.1 chr11 + 4620 2 full-splice_match ENDOD1 ENST00000278505.4 4687 2 60 7 no_subtype FALSE canonical NA NA 358 None 4 17 0 FALSE 0 0 NA A coding 500 1500 59 1558 PB.8990.4 chr17 + 1692 11 full-splice_match LGALS9 ENST00000395473.6 3114 11 1417 5 no_subtype FALSE canonical NA NA 972 None 6 11 2 FALSE 0 0 NA C coding 355 1065 52 1116 PB.8990.7 chr17 + 2611 5 novel_in_catalog LGALS9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1909 None 2 22 1 FALSE 0 0 NA C coding 131 393 1661 2053 PB.8990.6 chr17 + 5857 2 novel_in_catalog LGALS9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5137 None 2 33 0 FALSE 0 0 NA C coding 141 423 5408 5830 PB.8990.1 chr17 + 1527 10 full-splice_match LGALS9 ENST00000302228.9 3018 10 1453 38 no_subtype FALSE canonical NA NA 840 None 124 6 1 FALSE 0 0 NA C coding 323 969 16 984 PB.8990.2 chr17 + 1627 11 novel_not_in_catalog LGALS9 novel NA NA NA NA no_subtype FALSE canonical NA NA 905 None 3 8 2 FALSE 0 0 NA C coding 332 996 54 1049 PB.1237.1 chr2 + 1888 15 full-splice_match SNX17 ENST00000233575.6 2044 15 153 3 no_subtype TRUE canonical NA NA 1368 None 66 3 0 FALSE 0 0 NA A coding 470 1410 70 1479 PB.1589.2 chr2 + 3543 10 novel_not_in_catalog PLEKHB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1531 None 299 19 1 TRUE 0 0 NA B coding 222 666 108 773 PB.6917.3 chr12 - 5669 15 full-splice_match SCAF11 ENST00000369367.7 7543 15 -6 1880 no_subtype FALSE canonical NA NA 219 None 2 15 1 FALSE 0 0 NA C coding 1463 4389 241 4629 PB.1589.4 chr2 + 3442 8 novel_not_in_catalog PLEKHB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1434 None 31 19 1 TRUE 0 0 NA B coding 222 666 11 676 PB.6917.5 chr12 - 2778 11 incomplete-splice_match SCAF11 ENST00000369367.7 7543 15 6 4759 internal_fragment FALSE canonical NA NA 207 None 4 2 0 FALSE 0 0 NA C coding 850 2550 229 2778 PB.3677.8 chr5 - 1453 2 incomplete-splice_match DOK3 ENST00000510898.5 467 3 166 -1152 5prime_fragment FALSE canonical NA NA 112 None 2 5 0 FALSE 0 0 NA B coding 206 618 47 664 PB.6917.7 chr12 - 1311 4 full-splice_match SCAF11 ENST00000395453.2 1336 4 21 4 no_subtype FALSE canonical NA NA 207 None 2 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10646.1 chr22 + 3189 18 novel_not_in_catalog MED15 novel NA NA NA NA no_subtype FALSE canonical NA NA 2144 None 34 8 0 TRUE 0 0 NA C coding 748 2244 35 2278 PB.2971.1 chr4 + 2856 9 full-splice_match DAPP1 ENST00000512369.1 1440 9 9 -1425 no_subtype FALSE canonical NA NA 833 None 47 15 0 FALSE 0 0 NA C coding 280 840 60 899 PB.10646.3 chr22 + 2899 19 novel_not_in_catalog MED15 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1848 None 2 10 1 TRUE 0 0 NA C coding 630 1890 93 1982 PB.10646.2 chr22 + 2692 3 novel_in_catalog MED15 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 258 None 5 9 0 FALSE 0 0 NA C coding 71 213 103 315 PB.10646.5 chr22 + 3452 2 novel_not_in_catalog MED15 novel NA NA NA NA no_subtype FALSE canonical NA NA 801 None 5 21 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.10646.4 chr22 + 3337 18 full-splice_match MED15 ENST00000263205.11 3351 18 2 12 no_subtype FALSE canonical NA NA 2297 None 8 12 0 FALSE 0 0 NA C coding 788 2364 68 2431 PB.10646.6 chr22 + 3144 19 novel_not_in_catalog MED15 novel NA NA NA NA no_subtype FALSE canonical NA NA 2098 None 2 15 0 TRUE 0 0 NA C coding 717 2151 82 2232 PB.7056.3 chr12 + 2797 22 novel_in_catalog MARS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2584 None 5 1 1 FALSE 0 0 NA C coding 826 2478 9 2486 PB.7056.2 chr12 + 2700 21 full-splice_match MARS ENST00000262027.9 2905 21 205 0 no_subtype FALSE canonical NA NA 2485 None 110 1 1 FALSE 0 0 NA C coding 666 1998 632 2629 PB.11013.1 chrX + 3296 5 full-splice_match EFNB1 ENST00000204961.4 3314 5 24 -6 no_subtype FALSE canonical NA NA 1384 None 18 6 0 FALSE 0 0 NA A coding 346 1038 757 1794 PB.7056.7 chr12 + 3201 21 novel_in_catalog MARS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2988 None 2 4 2 FALSE 0 0 NA C coding 596 1788 16 1803 PB.7056.6 chr12 + 2804 21 novel_not_in_catalog MARS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2587 None 5 1 0 TRUE 0 0 NA C coding 849 2547 25 2571 PB.7056.5 chr12 + 3478 14 novel_in_catalog MARS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1660 None 2 7 0 FALSE 0 0 NA C coding 596 1788 26 1813 PB.10348.1 chr20 + 5517 15 novel_not_in_catalog CEP250 novel NA NA NA NA no_subtype FALSE canonical NA NA 4471 None 2 7 1 TRUE 0 0 NA A coding 1524 4572 161 4732 PB.3305.1 chr5 + 1356 12 full-splice_match CDK7 ENST00000256443.7 1439 12 -17 100 no_subtype FALSE canonical NA NA 1132 None 3 2 0 FALSE 0 0 NA A coding 346 1038 121 1158 PB.5551.1 chr9 + 3742 14 novel_not_in_catalog TBC1D13 novel NA NA NA NA no_subtype FALSE canonical NA NA 2880 None 28 15 2 TRUE 0 0 NA B coding 400 1200 42 1241 PB.10981.2 chrX + 2957 6 novel_in_catalog TSPYL2 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 2195 None 4 7 0 FALSE 0 0 NA C coding 390 1170 1187 2356 PB.599.1 chr1 - 2889 1 antisense novelGene_ATP1A1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A coding 62 186 294 479 PB.9612.1 chr18 + 2834 3 novel_not_in_catalog RP11-862L9.3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1068 None 16 21 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.2911.2 chr4 - 1286 8 full-splice_match HNRNPDL ENST00000602300.5 1291 8 3 2 no_subtype FALSE canonical NA NA 191 None 12 0 0 FALSE 0 0 NA C coding 301 903 106 1008 PB.2911.3 chr4 - 2435 7 full-splice_match HNRNPDL ENST00000507721.5 2404 7 -43 12 no_subtype FALSE canonical NA NA 193 None 7 8 0 FALSE 0 0 NA C coding 301 903 108 1010 PB.2911.1 chr4 - 2680 9 novel_not_in_catalog HNRNPDL novel NA NA NA NA no_subtype TRUE canonical NA NA 191 None 20 25 1 TRUE 0 0 NA C coding 301 903 106 1008 PB.2911.4 chr4 - 1359 9 full-splice_match HNRNPDL ENST00000349655.8 1402 9 39 4 no_subtype FALSE canonical NA NA 161 None 3 2 0 FALSE 0 0 NA C coding 301 903 76 978 PB.2883.3 chr4 - 2844 21 novel_in_catalog SDAD1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 146 None 2 14 1 FALSE 0 0 NA C coding 258 774 1240 2013 PB.7648.1 chr14 - 3359 15 incomplete-splice_match HECTD1 ENST00000554882.5 3748 18 381 8 5prime_fragment FALSE canonical NA NA 111 None 3 3 0 FALSE 0 0 NA B coding 736 2208 339 2546 PB.10297.1 chr20 - 3665 1 full-splice_match THBD ENST00000377103.2 4109 1 74 370 no_subtype FALSE canonical NA NA NA None 35 13 0 FALSE 0 0 NA A coding 575 1725 164 1888 PB.7648.3 chr14 - 1780 10 incomplete-splice_match HECTD1 ENST00000553700.5 9080 43 135 7165 internal_fragment FALSE canonical NA NA 279 None 3 1 0 FALSE 0 0 NA B coding 471 1413 367 1779 PB.2494.2 chr3 - 4080 24 novel_in_catalog PIK3CB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 226 None 2 14 0 FALSE 0 0 NA B coding 1064 3192 366 3557 PB.10423.1 chr20 - 2060 10 novel_not_in_catalog SLC35C2 novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 17 8 0 FALSE 0 0 NA A coding 365 1095 311 1405 PB.9542.2 chr18 + 5778 23 novel_not_in_catalog ELP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2669 None 3 23 1 TRUE 0 0 NA C coding 826 2478 36 2513 PB.9542.1 chr18 + 2530 22 full-splice_match ELP2 ENST00000358232.10 8459 22 21 5908 no_subtype FALSE canonical NA NA 2366 None 3 2 0 FALSE 0 0 NA C coding 826 2478 43 2520 PB.2551.1 chr3 - 2834 11 full-splice_match CCNL1 ENST00000295926.7 2388 11 66 -512 no_subtype FALSE canonical NA NA 356 None 2 8 0 FALSE 0 0 NA C coding 526 1578 54 1631 PB.9542.7 chr18 + 3182 1 incomplete-splice_match ELP2 ENST00000358232.10 8459 22 2641 2637 no_subtype FALSE canonical NA NA NA None 12 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9542.6 chr18 + 3175 3 novel_not_in_catalog ELP2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 69 None 21 24 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.1595.1 chr2 + 3519 2 genic MIR3679 novel NA NA NA NA no_subtype FALSE canonical NA NA 3490 None 6 27 1 FALSE 0 0 NA B coding 125 375 2684 3058 PB.9542.4 chr18 + 3209 2 novel_not_in_catalog ELP2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 27 None 8 22 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.2302.12 chr3 - 2723 2 genic_intron novelGene_672 novel NA NA NA NA no_subtype TRUE canonical NA NA 31 None 3 17 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.7959.153 chr14 - 1557 9 fusion IGHG1,IGHV3-7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 122 None 2 18 4 TRUE 0 0 NA B coding 196 588 834 1421 PB.2384.1 chr3 + 4577 15 full-splice_match ATP6V1A ENST00000273398.7 4591 15 11 3 no_subtype FALSE canonical NA NA 1858 None 2 21 1 FALSE 0 0 NA C coding 617 1851 98 1948 PB.784.5 chr1 - 3096 15 novel_not_in_catalog DCAF8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 354 None 10 12 1 TRUE 0 0 NA B coding 597 1791 451 2241 PB.2240.2 chr3 + 1599 2 full-splice_match SMIM4 ENST00000307106.3 274 2 36 -1361 no_subtype FALSE canonical NA NA 136 None 3 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2240.1 chr3 + 1732 2 full-splice_match SMIM4 ENST00000477703.5 1770 2 33 5 no_subtype FALSE canonical NA NA 269 None 2 13 0 FALSE 0 0 NA C coding 70 210 119 328 PB.6054.1 chr10 + 2748 2 antisense novelGene_TIAL1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 2 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.784.1 chr1 - 2792 14 novel_not_in_catalog DCAF8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 115 None 24 7 1 TRUE 0 0 NA B coding 597 1791 147 1937 PB.2374.3 chr3 + 2713 3 novel_not_in_catalog SLC35A5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2397 None 6 23 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.784.3 chr1 - 3802 15 novel_not_in_catalog DCAF8 novel NA NA NA NA no_subtype FALSE canonical NA NA 38 None 2 16 2 TRUE 0 0 NA B coding 597 1791 139 1929 PB.6039.4 chr10 - 2953 1 novel_in_catalog ABLIM1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1845.15 chr2 - 7751 45 full-splice_match FN1 ENST00000443816.5 7762 45 6 5 no_subtype FALSE canonical NA NA 413 None 6 7 0 FALSE 0 0 NA C coding 2265 6795 266 7060 PB.7213.1 chr12 + 7698 6 novel_not_in_catalog TCP11L2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 7501 None 2 56 1 TRUE 0 0 NA A coding 147 441 6375 6815 PB.3300.1 chr5 + 2890 1 genic_intron novelGene_632 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3582.2 chr5 - 3811 14 novel_not_in_catalog DCTN4 novel NA NA NA NA no_subtype FALSE canonical NA NA 166 None 61 15 0 TRUE 0 0 NA A coding 460 1380 32 1411 PB.8602.3 chr16 - 1747 3 novel_in_catalog SNX20 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 119 None 2 9 0 FALSE 0 0 NA C coding 114 342 129 470 PB.5756.4 chr10 - 1625 4 full-splice_match CXCL12 ENST00000374426.6 470 4 -54 -1101 no_subtype FALSE canonical NA NA 153 None 3 6 0 FALSE 0 0 NA C coding 119 357 93 449 PB.8602.1 chr16 - 1546 1 incomplete-splice_match SNX20 ENST00000330943.8 2904 4 1350 9 no_subtype FALSE canonical NA NA NA None 3 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.196.2 chr1 - 6074 19 novel_not_in_catalog EYA3 novel NA NA NA NA no_subtype FALSE canonical NA NA 165 None 2 21 0 TRUE 0 0 NA B coding 573 1719 234 1952 PB.196.3 chr1 - 5935 18 novel_not_in_catalog EYA3 novel NA NA NA NA no_subtype FALSE canonical NA NA 165 None 5 24 0 TRUE 0 0 NA B coding 527 1581 234 1814 PB.10956.1 chrX + 1461 6 full-splice_match GATA1 ENST00000376670.7 1497 6 35 1 no_subtype FALSE canonical NA NA 946 None 2 0 0 FALSE 0 0 NA A coding 413 1239 77 1315 PB.5756.5 chr10 - 1851 3 full-splice_match CXCL12 ENST00000343575.10 1857 3 -5 11 no_subtype FALSE canonical NA NA 153 None 298 3 0 FALSE 0 0 NA C coding 89 267 93 359 PB.196.4 chr1 - 1281 1 incomplete-splice_match EYA3 ENST00000540618.5 5885 17 4603 2 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.196.5 chr1 - 5900 18 novel_not_in_catalog EYA3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 102 None 2 33 2 TRUE 0 0 NA B coding 329 987 794 1780 PB.7692.1 chr14 + 3321 1 antisense novelGene_NIN_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7780.5 chr14 - 4302 21 novel_not_in_catalog ACTN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 351 None 4 4 0 TRUE 0 0 NA B coding 784 2352 247 2598 PB.4538.1 chr7 - 2068 13 full-splice_match CYP3A7-CYP3A51P ENST00000620220.4 1704 13 -94 -270 no_subtype FALSE canonical NA NA 174 None 3 4 0 FALSE 0 0 NA A coding 503 1509 104 1612 PB.2919.1 chr4 - 2793 3 novel_not_in_catalog PLAC8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2735 None 2 26 2 TRUE 0 0 NA B coding 89 267 31 297 PB.2260.1 chr3 + 2831 3 full-splice_match PDE12 ENST00000311180.8 8773 3 32 5910 no_subtype FALSE canonical NA NA 1458 None 18 7 0 FALSE 0 0 NA A coding 609 1827 72 1898 PB.5756.3 chr10 - 2761 1 incomplete-splice_match CXCL12 ENST00000374429.6 3532 4 763 9 no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.11100.1 chrX - 1862 3 full-splice_match TSC22D3 ENST00000372397.6 2027 3 147 18 no_subtype FALSE canonical NA NA 299 None 492 6 0 FALSE 0 0 NA C coding 134 402 178 579 PB.7237.1 chr12 + 5685 30 novel_not_in_catalog UBE3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3577 None 9 17 2 TRUE 0 0 NA B coding 1068 3204 563 3766 PB.6039.3 chr10 - 1599 17 novel_not_in_catalog ABLIM1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 167 None 3 15 2 TRUE 0 0 NA B coding 197 591 891 1481 PB.7237.4 chr12 + 3612 2 novel_in_catalog UBE3B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1498 None 2 15 0 FALSE 0 0 NA B coding 148 444 1224 1667 PB.6039.2 chr10 - 6024 17 novel_in_catalog ABLIM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 144 None 10 21 0 FALSE 0 0 NA B coding 427 1281 199 1479 PB.8275.1 chr15 + 1595 6 novel_in_catalog MRPS11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 484 None 2 10 0 FALSE 0 0 NA A coding 193 579 11 589 PB.7060.1 chr12 + 3099 10 full-splice_match PIP4K2C ENST00000354947.9 2924 10 -9 -166 no_subtype FALSE canonical NA NA 1210 None 94 11 0 FALSE 0 0 NA C coding 421 1263 26 1288 PB.7060.2 chr12 + 2800 1 novel_in_catalog PIP4K2C novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1496.4 chr2 - 3761 17 novel_in_catalog TMEM131 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 69 None 3 6 0 FALSE 0 0 NA B coding 967 2901 100 3000 PB.10402.1 chr20 - 1763 1 antisense novelGene_YWHAB_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4518.1 chr7 - 2841 2 genic_intron novelGene_864 novel NA NA NA NA no_subtype FALSE canonical NA NA 32 None 2 23 1 FALSE 0 0 NA A coding 87 261 47 307 PB.4518.3 chr7 - 1658 10 full-splice_match SGCE ENST00000447873.5 1597 10 -40 -21 no_subtype FALSE canonical NA NA 217 None 2 6 0 FALSE 0 0 NA C coding 428 1284 109 1392 PB.4518.2 chr7 - 1633 11 full-splice_match SGCE ENST00000265735.11 1694 11 63 -2 no_subtype FALSE canonical NA NA 157 None 5 3 0 FALSE 0 0 NA C coding 437 1311 49 1359 PB.3750.2 chr6 + 1864 4 novel_in_catalog CD83 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 300 None 2 3 0 FALSE 0 0 NA C coding 26 78 349 426 PB.3750.3 chr6 + 3741 2 novel_in_catalog CD83 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 77 None 5 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3750.1 chr6 + 2094 5 full-splice_match CD83 ENST00000379153.3 2471 5 131 246 no_subtype FALSE canonical NA NA 529 None 11 2 0 FALSE 0 0 NA C coding 205 615 41 655 PB.7121.1 chr12 + 2643 6 full-splice_match TMEM19 ENST00000266673.9 5656 6 10 3003 no_subtype FALSE canonical NA NA 1431 None 11 12 0 FALSE 0 0 NA A coding 300 900 693 1592 PB.3677.4 chr5 - 3575 6 novel_in_catalog DOK3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 60 None 3 22 0 FALSE 0 0 NA B coding 440 1320 178 1497 PB.2551.11 chr3 - 2741 7 novel_in_catalog CCNL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 356 None 2 8 0 FALSE 0 0 NA C coding 225 675 54 728 PB.9512.4 chr18 - 4409 25 full-splice_match NPC1 ENST00000269228.9 5157 25 457 291 no_subtype FALSE canonical NA NA 155 None 6 6 0 FALSE 0 0 NA C coding 1278 3834 99 3932 PB.9512.5 chr18 - 2877 10 novel_in_catalog NPC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 155 None 4 11 1 FALSE 0 0 NA C coding 553 1659 99 1757 PB.9938.3 chr19 + 3269 14 novel_not_in_catalog CD22 novel NA NA NA NA no_subtype FALSE canonical NA NA 2481 None 2 8 1 FALSE 0 0 NA C coding 775 2325 67 2391 PB.9938.4 chr19 + 3204 13 novel_in_catalog CD22 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2415 None 2 8 0 FALSE 0 0 NA C coding 727 2181 364 2544 PB.9938.5 chr19 + 3264 15 novel_not_in_catalog CD22 novel NA NA NA NA no_subtype FALSE canonical NA NA 2467 None 2 8 0 TRUE 0 0 NA C coding 847 2541 56 2596 PB.8563.3 chr16 + 1303 3 full-splice_match TMEM265 ENST00000615541.2 995 3 -313 5 no_subtype FALSE canonical NA NA 808 None 2 6 0 FALSE 0 0 NA A coding 108 324 644 967 PB.8563.2 chr16 + 2769 1 incomplete-splice_match SRCAP ENST00000262518.8 11754 34 7699 1287 no_subtype FALSE canonical NA NA NA None 8 5 0 FALSE 0 0 NA B coding 435 1305 1072 2376 PB.2055.1 chr3 + 2738 8 full-splice_match RARB ENST00000330688.8 3084 8 341 5 no_subtype FALSE canonical NA NA 1230 None 2 14 0 FALSE 0 0 NA A coding 448 1344 81 1424 PB.4178.1 chr6 + 5770 39 novel_in_catalog UTRN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5702 None 3 10 1 FALSE 0 0 NA B coding 1823 5469 300 5768 PB.4764.8 chr7 - 4029 28 novel_not_in_catalog KMT2C novel NA NA NA NA no_subtype FALSE canonical NA NA 14 None 2 5 1 TRUE 0 0 NA B coding 1338 4014 16 4029 PB.7575.4 chr13 - 3412 3 novel_not_in_catalog ANKRD10 novel NA NA NA NA no_subtype FALSE canonical NA NA 1371 None 2 37 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.7549.2 chr13 + 5653 28 novel_not_in_catalog IPO5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3423 None 2 17 0 TRUE 0 0 NA B coding 1097 3291 7 3297 PB.9300.2 chr17 - 5975 10 novel_not_in_catalog ERN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 185 None 2 43 1 TRUE 0 0 NA B coding 280 840 324 1163 PB.9300.1 chr17 - 2697 1 incomplete-splice_match ERN1 ENST00000433197.3 7876 22 5178 2 no_subtype FALSE canonical NA NA NA None 3 20 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7549.1 chr13 + 3969 27 novel_not_in_catalog IPO5 novel NA NA NA NA no_subtype FALSE canonical NA NA 3226 None 80 3 0 TRUE 0 0 NA B coding 1097 3291 20 3310 PB.2302.11 chr3 - 2700 1 genic_intron novelGene_672 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1615.1 chr2 + 5733 8 full-splice_match ARHGAP15 ENST00000552641.5 1086 8 0 -4647 no_subtype FALSE canonical NA NA 641 None 2 41 0 FALSE 0 0 NA C coding 239 717 69 785 PB.693.1 chr1 - 3100 1 incomplete-splice_match GATAD2B ENST00000368655.4 7478 11 2473 1906 no_subtype FALSE canonical NA NA NA None 16 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11143.1 chrX + 3355 7 full-splice_match XIAP ENST00000371199.7 8591 7 -21 5257 no_subtype FALSE canonical NA NA 1620 None 4 16 0 FALSE 0 0 NA C coding 497 1491 321 1811 PB.8422.1 chr16 + 1928 13 full-splice_match ALG1 ENST00000262374.9 2132 13 6 198 no_subtype TRUE canonical NA NA 1288 None 2 6 0 FALSE 0 0 NA A coding 464 1392 26 1417 PB.11143.3 chrX + 5673 8 novel_not_in_catalog XIAP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5094 None 2 25 0 TRUE 0 0 NA C coding 497 1491 211 1701 PB.7769.2 chr14 + 1470 8 full-splice_match EIF2S1 ENST00000256383.8 4485 8 356 2659 no_subtype FALSE canonical NA NA 927 None 71 0 0 FALSE 0 0 NA A coding 315 945 106 1050 PB.7769.3 chr14 - 1488 9 full-splice_match PLEK2 ENST00000216446.8 1549 9 54 7 no_subtype FALSE canonical NA NA 129 None 5 5 0 FALSE 0 0 NA C coding 353 1059 88 1146 PB.9586.1 chr18 - 1807 3 novel_not_in_catalog RNF152 novel NA NA NA NA no_subtype FALSE canonical NA NA 197 None 2 7 0 TRUE 0 0 NA B coding 203 609 435 1043 PB.7769.1 chr14 - 2659 2 genic ATP6V1D novel NA NA NA NA no_subtype FALSE non_canonical NA NA 280 None 7 27 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.7403.1 chr13 - 4007 1 genic_intron novelGene_267 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 36 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6628.2 chr11 + 4997 19 novel_not_in_catalog CUL5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2541 None 6 18 1 FALSE 0 0 NA B coding 550 1650 1084 2733 PB.4043.1 chr6 - 2656 10 full-splice_match FBXL4 ENST00000369244.6 8035 10 -19 5398 no_subtype TRUE canonical NA NA 140 None 7 4 0 FALSE 0 0 NA A coding 547 1641 671 2311 PB.121.4 chr1 + 2969 1 genic_intron novelGene_208 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2106.4 chr3 - 3892 4 novel_not_in_catalog CX3CR1 novel NA NA NA NA no_subtype TRUE canonical NA NA 268 None 3 14 2 TRUE 0 0 NA C coding 365 1095 883 1977 PB.2106.2 chr3 + 3091 3 antisense novelGene_CX3CR1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3012 None 71 11 1 FALSE 0 0 NA B coding 138 414 2565 2978 PB.2106.3 chr3 + 1815 2 antisense novelGene_CX3CR1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1716 None 2 11 1 FALSE 0 0 NA B coding 102 306 503 808 PB.5054.1 chr8 - 2804 5 novel_not_in_catalog KLF10 novel NA NA NA NA no_subtype FALSE canonical NA NA 158 None 189 6 0 TRUE 0 0 NA A coding 480 1440 123 1562 PB.2106.1 chr3 - 2712 2 full-splice_match CX3CR1 ENST00000399220.2 3106 2 -1 395 no_subtype FALSE canonical NA NA 82 None 37 16 0 FALSE 0 0 NA C coding 355 1065 92 1156 PB.852.1 chr1 + 2502 7 full-splice_match BLZF1 ENST00000367808.7 2749 7 244 3 no_subtype FALSE canonical NA NA 1196 None 5 10 0 FALSE 0 0 NA A coding 400 1200 180 1379 PB.1712.1 chr2 - 686 5 full-splice_match ATP5G3 ENST00000284727.8 5484 5 2907 1891 no_subtype FALSE canonical NA NA 45 None 10 1 0 FALSE 0 0 NA C coding 142 426 119 544 PB.8910.1 chr17 + 5525 23 novel_not_in_catalog KDM6B novel NA NA NA NA no_subtype TRUE canonical NA NA 5316 None 2 7 0 FALSE 0 0 NA C coding 1643 4929 409 5337 PB.121.6 chr1 + 5808 14 novel_not_in_catalog ZBTB40 novel NA NA NA NA no_subtype FALSE canonical NA NA 3589 None 2 14 0 FALSE 0 0 NA C coding 829 2487 1295 3781 PB.665.4 chr1 - 4316 22 full-splice_match ARNT ENST00000358595.9 4887 22 170 401 no_subtype FALSE canonical NA NA 56 None 4 11 0 FALSE 0 0 NA C coding 789 2367 32 2398 PB.8910.2 chr17 + 6205 23 full-splice_match KDM6B ENST00000448097.6 5422 23 -58 -725 no_subtype FALSE canonical NA NA 5297 None 5 8 0 FALSE 0 0 NA C coding 1643 4929 390 5318 PB.573.5 chr1 + 1806 2 antisense novelGene_MRPL53P1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 166 None 2 5 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.573.4 chr1 + 3074 9 novel_in_catalog CAPZA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1536 None 4 24 0 FALSE 0 0 NA B coding 218 654 1021 1674 PB.573.6 chr1 + 1550 1 genic_intron novelGene_1000 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 11 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.573.1 chr1 + 2988 11 novel_not_in_catalog CAPZA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1368 None 17 13 0 TRUE 0 0 NA B coding 286 858 649 1506 PB.2132.1 chr3 + 3214 11 novel_not_in_catalog TCAIM novel NA NA NA NA no_subtype FALSE canonical NA NA 1225 None 9 16 0 TRUE 0 0 NA A coding 273 819 401 1219 PB.573.3 chr1 + 2974 4 novel_not_in_catalog CAPZA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2537 None 50 20 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.3980.3 chr6 - 1702 2 antisense novelGene_PTP4A1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 25 None 2 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3980.2 chr6 - 3045 2 antisense novelGene_PTP4A1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 396 None 2 25 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.3980.1 chr6 - 2005 1 full-splice_match RP5-1148A21.3 ENST00000584934.1 1404 1 -774 173 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1492.1 chr2 - 3647 15 novel_not_in_catalog SEMA4C novel NA NA NA NA no_subtype TRUE canonical NA NA 234 None 2 13 0 FALSE 0 0 NA A coding 833 2499 272 2770 PB.8069.1 chr15 + 1491 1 full-splice_match EID1 ENST00000530028.2 2298 1 259 548 no_subtype FALSE canonical NA NA NA None 97 7 0 FALSE 0 0 NA A coding 187 561 33 593 PB.10923.12 chrX + 1493 1 incomplete-splice_match DDX3X ENST00000629496.2 5023 18 3457 74 no_subtype FALSE canonical NA NA NA None 4 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9588.1 chr18 - 3004 5 genic_intron novelGene_597 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1471 None 7 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5012.1 chr8 + 4186 2 full-splice_match PDP1 ENST00000297598.4 4272 2 81 5 no_subtype FALSE canonical NA NA 144 None 2 21 0 FALSE 0 0 NA A coding 537 1611 189 1799 PB.2447.1 chr3 - 2485 1 novel_in_catalog ZXDC novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9252.1 chr17 - 5657 1 antisense novelGene_MSI2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 35 0 FALSE 0 0 NA A coding 175 525 344 868 PB.2868.1 chr4 + 4073 1 genic_intron novelGene_673 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6912.1 chr12 + 2788 10 novel_not_in_catalog TMEM117 novel NA NA NA NA no_subtype FALSE canonical NA NA 1057 None 2 7 0 TRUE 0 0 NA A coding 514 1542 160 1701 PB.393.1 chr1 + 2554 2 antisense novelGene_USP24_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2265 None 4 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9576.1 chr18 - 1616 11 full-splice_match FECH ENST00000262093.9 3853 11 75 2162 no_subtype FALSE canonical NA NA 144 None 61 4 0 FALSE 0 0 NA A coding 423 1269 78 1346 PB.6414.2 chr11 - 2724 10 novel_in_catalog MEN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 62 None 31 2 0 FALSE 0 0 NA C coding 610 1830 86 1915 PB.6414.3 chr11 - 2952 10 full-splice_match MEN1 ENST00000315422.8 3148 10 184 12 no_subtype FALSE canonical NA NA 290 None 5 6 0 FALSE 0 0 NA C coding 610 1830 314 2143 PB.4199.2 chr6 - 2621 1 novel_in_catalog SYNE1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6414.4 chr11 - 2707 10 novel_not_in_catalog MEN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 44 None 17 3 1 FALSE 0 0 NA C coding 610 1830 68 1897 PB.1150.1 chr1 - 6375 1 novel_in_catalog AKT3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 42 0 FALSE 0 0 NA A coding 112 336 5637 5972 PB.4136.1 chr6 - 1608 7 full-splice_match VNN1 ENST00000367928.4 3106 7 -1 1499 no_subtype FALSE canonical NA NA 225 None 881 0 0 FALSE 0 0 NA C coding 513 1539 16 1554 PB.4136.3 chr6 - 2785 8 novel_not_in_catalog VNN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 225 None 29 9 0 TRUE 0 0 NA C coding 513 1539 16 1554 PB.6912.2 chr12 + 2877 3 genic_intron novelGene_435 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2280 None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4136.5 chr6 - 1521 1 genic VNN1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4136.6 chr6 - 3568 8 novel_not_in_catalog VNN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 225 None 2 19 1 TRUE 0 0 NA C coding 513 1539 16 1554 PB.4896.2 chr8 + 3447 8 incomplete-splice_match AP3M2 ENST00000174653.3 3661 9 209 5 internal_fragment FALSE canonical NA NA 1229 None 10 11 0 FALSE 0 0 NA B coding 418 1254 74 1327 PB.3623.6 chr5 - 2297 1 genic_intron novelGene_1273 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1108.1 chr1 + 4201 17 novel_not_in_catalog GALNT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1540 None 2 22 1 TRUE 0 0 NA B coding 517 1551 44 1594 PB.3623.3 chr5 - 3586 11 full-splice_match RNF145 ENST00000424310.6 3613 11 19 8 no_subtype TRUE canonical NA NA 302 None 3 8 0 FALSE 0 0 NA C coding 663 1989 342 2330 PB.9127.5 chr17 - 2596 11 novel_not_in_catalog DHX58 novel NA NA NA NA no_subtype FALSE canonical NA NA 49 None 4 3 0 FALSE 0 0 NA B coding 585 1755 51 1805 PB.650.1 chr1 - 1446 7 full-splice_match ANP32E ENST00000583931.5 3451 7 43 1962 no_subtype FALSE canonical NA NA 381 None 6 7 0 FALSE 0 0 NA A coding 268 804 328 1131 PB.3772.1 chr6 + 4477 23 novel_not_in_catalog KDM1B novel NA NA NA NA no_subtype FALSE canonical NA NA 2537 None 5 20 0 TRUE 0 0 NA A coding 822 2466 153 2618 PB.9127.1 chr17 - 2419 13 novel_not_in_catalog DHX58 novel NA NA NA NA no_subtype FALSE canonical NA NA 49 None 26 1 0 FALSE 0 0 NA B coding 678 2034 51 2084 PB.9127.2 chr17 - 3839 12 novel_in_catalog DHX58 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 88 None 3 7 0 FALSE 0 0 NA B coding 585 1755 90 1844 PB.10701.1 chr22 + 1854 9 full-splice_match TCN2 ENST00000215838.7 2535 9 455 226 no_subtype TRUE canonical NA NA 1261 None 12 6 0 FALSE 0 0 NA A coding 427 1281 40 1320 PB.8300.4 chr15 + 2831 19 novel_in_catalog FES novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2472 None 17 9 0 FALSE 0 0 NA C coding 822 2466 147 2612 PB.4944.2 chr8 + 5823 1 novel_in_catalog RAB2A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 44 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6120.2 chr11 + 1610 11 novel_not_in_catalog CRACR2B novel NA NA NA NA no_subtype FALSE canonical NA NA 1510 None 2 13 1 TRUE 0 0 NA B coding 302 906 446 1351 PB.6120.1 chr11 + 1546 11 novel_not_in_catalog CRACR2B novel NA NA NA NA no_subtype TRUE canonical NA NA 1441 None 9 12 2 TRUE 0 0 NA B coding 399 1197 86 1282 PB.4806.1 chr8 + 2054 13 novel_not_in_catalog VPS37A novel NA NA NA NA no_subtype FALSE canonical NA NA 1433 None 12 1 0 TRUE 0 0 NA A coding 397 1191 240 1430 PB.7000.1 chr12 + 1484 9 full-splice_match TARBP2 ENST00000266987.6 1867 9 379 4 no_subtype FALSE canonical NA NA 1047 None 4 3 0 FALSE 0 0 NA C coding 366 1098 105 1202 PB.1913.1 chr2 - 3767 1 novel_in_catalog GPR55 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A coding 319 957 137 1093 PB.9696.1 chr19 + 2678 2 antisense novelGene_PTPRS_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2417 None 2 23 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.665.1 chr1 - 3177 12 novel_not_in_catalog ARNT novel NA NA NA NA no_subtype FALSE non_canonical NA NA 30 None 2 11 0 FALSE 0 0 NA C coding 364 1092 168 1259 PB.7058.1 chr12 + 4164 13 full-splice_match MBD6 ENST00000355673.7 4282 13 109 9 no_subtype FALSE canonical NA NA 3184 None 10 9 0 FALSE 0 0 NA A coding 1003 3009 248 3256 PB.5897.1 chr10 + 2463 2 genic_intron novelGene_809 novel NA NA NA NA no_subtype FALSE canonical NA NA 1005 None 3 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8081.1 chr15 + 1658 12 novel_not_in_catalog USP8 novel NA NA NA NA no_subtype FALSE canonical NA NA 1375 None 22 1 1 TRUE 0 0 NA A coding 500 1500 158 1657 PB.6544.1 chr11 - 4198 3 full-splice_match LRRC32 ENST00000260061.9 4207 3 1 8 no_subtype FALSE canonical NA NA 133 None 14 12 0 FALSE 0 0 NA A coding 662 1986 138 2123 PB.9437.1 chr17 + 1841 11 full-splice_match SLC25A10 ENST00000350690.9 1885 11 40 4 no_subtype FALSE canonical NA NA 808 None 12 12 0 FALSE 0 0 NA A coding 287 861 47 907 PB.4740.1 chr7 - 2732 2 antisense novelGene_GIMAP8_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2230 None 11 5 1 FALSE 0 0 NA A coding 157 471 1775 2245 PB.10980.1 chrX + 3657 2 novel_not_in_catalog FAM156B novel NA NA NA NA no_subtype FALSE canonical NA NA 2211 None 15 16 0 FALSE 0 0 NA B coding 213 639 2329 2967 PB.2629.3 chr3 + 5377 32 novel_in_catalog EIF4G1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4762 None 2 3 1 FALSE 0 0 NA B coding 1559 4677 265 4941 PB.658.2 chr1 - 3081 3 novel_not_in_catalog MCL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 166 None 3 24 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.3404.1 chr5 - 1582 2 genic_intron novelGene_974 novel NA NA NA NA no_subtype TRUE canonical NA NA 918 None 2 7 0 FALSE 0 0 NA A coding 86 258 44 301 PB.11110.1 chrX - 3558 13 full-splice_match CAPN6 ENST00000324068.1 3568 13 9 1 no_subtype FALSE canonical NA NA 144 None 4 6 0 FALSE 0 0 NA A coding 641 1923 160 2082 PB.8905.1 chr17 + 1647 6 full-splice_match CD68 ENST00000250092.10 1878 6 224 7 no_subtype FALSE canonical NA NA 918 None 150 6 0 FALSE 0 0 NA A coding 174 522 528 1049 PB.658.4 chr1 - 3459 4 novel_not_in_catalog MCL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 294 None 27 24 1 TRUE 0 0 NA C coding 152 456 201 656 PB.8128.1 chr15 - 3280 2 genic_intron novelGene_579 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 263 None 4 12 1 FALSE 0 0 NA A coding 110 330 762 1091 PB.4064.2 chr6 + 1482 1 genic_intron novelGene_977 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9797.1 chr19 - 1748 1 novel_in_catalog C19orf43 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A coding 158 474 14 487 PB.3399.4 chr5 + 3628 25 novel_not_in_catalog PAM novel NA NA NA NA no_subtype FALSE canonical NA NA 2803 None 2 15 2 FALSE 0 0 NA B coding 792 2376 378 2753 PB.3399.3 chr5 + 3575 24 novel_not_in_catalog PAM novel NA NA NA NA no_subtype FALSE canonical NA NA 2749 None 2 6 1 FALSE 0 0 NA B coding 800 2400 378 2777 PB.10588.1 chr21 + 5995 12 novel_not_in_catalog PDXK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2055 None 5 28 0 TRUE 0 0 NA A coding 312 936 164 1099 PB.3399.1 chr5 + 3658 26 novel_not_in_catalog PAM novel NA NA NA NA no_subtype TRUE canonical NA NA 2839 None 3 9 2 FALSE 0 0 NA B coding 866 2598 418 3015 PB.4522.1 chr7 - 2934 18 full-splice_match SLC25A13 ENST00000265631.9 3136 18 -1 203 no_subtype FALSE canonical NA NA 153 None 2 6 0 FALSE 0 0 NA A coding 675 2025 139 2163 PB.7801.7 chr14 - 3699 13 novel_not_in_catalog NUMB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 177 None 3 18 3 TRUE 0 0 NA C coding 640 1920 420 2339 PB.7801.6 chr14 - 3475 12 novel_not_in_catalog NUMB novel NA NA NA NA no_subtype FALSE canonical NA NA 150 None 2 6 0 TRUE 0 0 NA C coding 592 1776 340 2115 PB.10648.5 chr22 - 5966 51 novel_not_in_catalog PI4KA novel NA NA NA NA no_subtype FALSE canonical NA NA 112 None 4 4 0 TRUE 0 0 NA B coding 1833 5499 131 5629 PB.7106.2 chr12 + 3073 13 novel_not_in_catalog MDM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2660 None 10 14 1 TRUE 0 0 NA B coding 486 1458 319 1776 PB.7801.3 chr14 - 3458 11 full-splice_match NUMB ENST00000554546.5 3607 11 36 113 no_subtype FALSE canonical NA NA 89 None 3 7 1 FALSE 0 0 NA C coding 592 1776 322 2097 PB.10648.2 chr22 - 5660 49 novel_not_in_catalog PI4KA novel NA NA NA NA no_subtype FALSE canonical NA NA 13 None 2 4 0 TRUE 0 0 NA B coding 1747 5241 74 5314 PB.7801.1 chr14 - 3660 13 novel_not_in_catalog NUMB novel NA NA NA NA no_subtype TRUE canonical NA NA 177 None 2 13 1 TRUE 0 0 NA C coding 640 1920 367 2286 PB.8743.2 chr16 - 2851 1 novel_in_catalog FA2H novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA C coding 250 750 66 815 PB.8300.8 chr15 + 3038 18 novel_in_catalog FES novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2685 None 2 1 0 FALSE 0 0 NA C coding 542 1626 51 1676 PB.6567.1 chr11 - 3538 1 incomplete-splice_match RAB30 ENST00000612684.4 9783 5 4412 1834 no_subtype FALSE canonical NA NA NA None 11 26 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8215.1 chr15 - 1599 1 incomplete-splice_match SIN3A ENST00000394947.7 6737 21 5135 4 no_subtype FALSE canonical NA NA NA None 8 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7801.9 chr14 - 3734 13 novel_not_in_catalog NUMB novel NA NA NA NA no_subtype FALSE canonical NA NA 137 None 3 7 0 FALSE 0 0 NA C coding 640 1920 459 2378 PB.7801.8 chr14 - 3537 12 novel_not_in_catalog NUMB novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 3 7 0 FALSE 0 0 NA C coding 592 1776 406 2181 PB.2361.1 chr3 + 3038 10 novel_not_in_catalog HHLA2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2001 None 4 23 0 TRUE 0 0 NA A coding 397 1191 228 1418 PB.1773.1 chr2 - 1170 1 genic_intron novelGene_1363 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA A coding 109 327 42 368 PB.6436.1 chr11 - 1803 1 full-splice_match AP000769.1 ENST00000625158.1 1589 1 794 -1008 no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2136.2 chr3 - 3723 5 novel_not_in_catalog CDCP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 162 None 2 17 1 TRUE 0 0 NA C coding 343 1029 81 1109 PB.198.2 chr1 + 2459 4 antisense novelGene_PTAFR_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2409 None 38 9 3 FALSE 0 0 NA A coding 108 324 1554 1877 PB.5642.1 chr9 - 1418 10 novel_not_in_catalog PNPLA7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 236 None 2 12 0 TRUE 0 0 NA A coding 369 1107 207 1313 PB.4944.1 chr8 - 2674 3 genic_intron novelGene_575 novel NA NA NA NA no_subtype FALSE canonical NA NA 108 None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6772.1 chr12 - 3789 14 full-splice_match C12orf4 ENST00000261250.7 3826 14 2 35 no_subtype FALSE canonical NA NA 61 None 8 9 0 FALSE 0 0 NA A coding 552 1656 87 1742 PB.795.6 chr1 - 3709 3 novel_not_in_catalog CD48 novel NA NA NA NA no_subtype FALSE canonical NA NA 353 None 2 27 1 TRUE 0 0 NA C coding 130 390 3020 3409 PB.2613.1 chr3 + 1405 2 novel_not_in_catalog ATP11B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 43 None 2 5 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.2572.1 chr3 - 3078 10 novel_not_in_catalog LRRC31 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 339 None 11 12 0 TRUE 0 0 NA A coding 552 1656 165 1820 PB.4077.3 chr6 - 2988 6 full-splice_match CD164 ENST00000310786.8 2993 6 -24 29 no_subtype FALSE canonical NA NA 265 None 29 23 0 FALSE 0 0 NA C coding 197 591 91 681 PB.3936.2 chr6 + 2607 10 novel_in_catalog TJAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 815 None 8 10 2 FALSE 0 0 NA B coding 547 1641 267 1907 PB.684.2 chr1 - 3275 3 novel_not_in_catalog S100A10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 35 None 3 20 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.684.3 chr1 - 2791 2 novel_in_catalog S100A10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 35 None 9 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8168.1 chr15 + 4027 1 antisense novelGene_SNAPC5_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 38 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7383.3 chr13 - 2821 9 novel_not_in_catalog ZMYM5 novel NA NA NA NA no_subtype FALSE canonical NA NA 52 None 2 9 0 TRUE 0 0 NA A coding 669 2007 194 2200 PB.662.1 chr1 + 1859 1 genic_intron novelGene_1240 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10223.2 chr20 + 2809 3 novel_not_in_catalog SDCBP2-AS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 282 None 3 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1128.5 chr1 - 2107 17 incomplete-splice_match ARID4B ENST00000491632.5 3823 20 -3 1719 internal_fragment FALSE canonical NA NA 403 None 2 0 0 FALSE 0 0 NA C coding 551 1653 453 2105 PB.10223.1 chr20 + 2733 7 novel_not_in_catalog SDCBP2-AS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 770 None 2 23 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.795.1 chr1 - 1132 4 novel_not_in_catalog CD48 novel NA NA NA NA no_subtype FALSE canonical NA NA 179 None 2 4 0 FALSE 0 0 NA C coding 211 633 194 826 PB.9052.5 chr17 - 3180 1 genic_intron novelGene_324 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 30 24 0 FALSE 0 0 NA A coding 102 306 1560 1865 PB.9052.4 chr17 - 1862 1 genic_intron novelGene_322 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6388.2 chr11 + 2571 2 genic TMEM179B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1007 None 2 12 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.4077.2 chr6 - 3001 5 novel_not_in_catalog CD164 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 297 None 67 25 1 TRUE 0 0 NA C coding 182 546 123 668 PB.9052.3 chr17 - 4028 14 incomplete-splice_match MYO1D ENST00000394649.8 5451 24 1419 4 5prime_fragment FALSE canonical NA NA 42 None 2 25 1 FALSE 0 0 NA B coding 546 1638 242 1879 PB.9052.2 chr17 - 4279 15 incomplete-splice_match MYO1D ENST00000394649.8 5451 24 1168 4 5prime_fragment FALSE canonical NA NA 147 None 4 18 0 FALSE 0 0 NA B coding 697 2091 40 2130 PB.9411.2 chr17 - 5945 21 novel_not_in_catalog USP36 novel NA NA NA NA no_subtype FALSE canonical NA NA 152 None 2 26 2 FALSE 0 0 NA C coding 1124 3372 326 3697 PB.7767.1 chr14 + 3093 11 novel_not_in_catalog FUT8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2419 None 4 8 1 TRUE 0 0 NA B coding 575 1725 659 2383 PB.7815.2 chr14 + 6169 17 incomplete-splice_match YLPM1 ENST00000325680.11 7108 21 14 925 3prime_fragment FALSE canonical NA NA 6140 None 2 3 0 FALSE 0 0 NA C coding 2019 6057 111 6167 PB.9728.2 chr19 + 3339 11 full-splice_match MAP2K7 ENST00000397979.3 3361 11 19 3 no_subtype FALSE canonical NA NA 1160 None 14 16 0 FALSE 0 0 NA C coding 419 1257 36 1292 PB.10660.1 chr22 - 5135 9 novel_not_in_catalog PPM1F novel NA NA NA NA no_subtype TRUE canonical NA NA 46 None 9 20 0 TRUE 0 0 NA B coding 454 1362 107 1468 PB.10660.2 chr22 - 5925 4 novel_not_in_catalog PPM1F novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1184 None 2 36 0 TRUE 0 0 NA B coding 142 426 3425 3850 PB.1924.7 chr2 + 1505 1 genic_intron novelGene_1414 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7498.1 chr13 - 1543 1 genic_intron novelGene_492 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5513.4 chr9 + 1618 1 novel_in_catalog ZBTB43 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9411.9 chr17 - 3357 17 novel_not_in_catalog USP36 novel NA NA NA NA no_subtype FALSE canonical NA NA 92 None 2 2 0 FALSE 0 0 NA C coding 652 1956 1401 3356 PB.6503.3 chr11 + 3420 19 novel_not_in_catalog CTTN novel NA NA NA NA no_subtype FALSE canonical NA NA 1873 None 2 15 0 FALSE 0 0 NA C coding 550 1650 358 2007 PB.6503.2 chr11 + 3221 18 full-splice_match CTTN ENST00000301843.12 3272 18 48 3 no_subtype FALSE canonical NA NA 1674 None 73 16 0 FALSE 0 0 NA C coding 550 1650 159 1808 PB.5704.1 chr10 + 3705 14 novel_not_in_catalog MLLT10 novel NA NA NA NA no_subtype FALSE canonical NA NA 2017 None 2 14 0 FALSE 0 0 NA A coding 481 1443 430 1872 PB.10694.5 chr22 + 3110 5 genic_intron novelGene_285 novel NA NA NA NA no_subtype FALSE canonical NA NA 1918 None 2 25 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7468.1 chr13 - 2543 6 novel_in_catalog ZC3H13 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 652 None 3 8 0 FALSE 0 0 NA B coding 486 1458 406 1863 PB.6374.1 chr11 - 6007 1 incomplete-splice_match AHNAK ENST00000378024.8 18787 5 12766 15 no_subtype FALSE canonical NA NA NA None 91 7 0 FALSE 0 0 NA C coding 1703 5109 72 5180 PB.7749.1 chr14 + 3877 15 full-splice_match HIF1A ENST00000337138.8 3919 15 34 8 no_subtype FALSE canonical NA NA 2560 None 90 9 0 FALSE 0 0 NA C coding 826 2478 232 2709 PB.5591.1 chr9 - 3124 11 full-splice_match TTF1 ENST00000334270.2 3052 11 -6 -66 no_subtype FALSE canonical NA NA 39 None 3 5 0 FALSE 0 0 NA A coding 905 2715 47 2761 PB.9076.1 chr17 + 2667 5 full-splice_match MRM1 ENST00000614766.4 1857 5 58 -868 no_subtype FALSE canonical NA NA 1070 None 2 10 0 FALSE 0 0 NA A coding 353 1059 182 1240 PB.8507.1 chr16 - 2613 2 genic_intron novelGene_225 novel NA NA NA NA no_subtype FALSE canonical NA NA 38 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2375.3 chr3 - 3223 8 full-splice_match CCDC80 ENST00000439685.6 3557 8 167 167 no_subtype FALSE canonical NA NA 210 None 2 1 0 FALSE 0 0 NA C coding 946 2838 234 3071 PB.1748.1 chr2 + 3831 2 novel_not_in_catalog C2orf88 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 56 None 16 32 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.2375.1 chr3 - 3727 8 full-splice_match CCDC80 ENST00000206423.7 12430 8 229 8474 no_subtype TRUE canonical NA NA 714 None 43 2 0 FALSE 0 0 NA C coding 946 2838 738 3575 PB.8507.5 chr16 - 1483 1 antisense novelGene_PRKCB_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2375.4 chr3 - 1681 1 novel_in_catalog CCDC80 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 7 1 0 FALSE 0 0 NA C coding 535 1605 76 1680 PB.2375.5 chr3 - 2102 2 incomplete-splice_match CCDC80 ENST00000206423.7 12430 8 488 9840 internal_fragment FALSE canonical NA NA 455 None 2 1 0 FALSE 0 0 NA C coding 535 1605 497 2101 PB.9360.1 chr17 + 2066 19 full-splice_match NUP85 ENST00000245544.8 2121 19 52 3 no_subtype FALSE canonical NA NA 1888 None 23 2 0 FALSE 0 0 NA C coding 656 1968 20 1987 PB.3590.1 chr5 + 2376 5 novel_not_in_catalog GM2A novel NA NA NA NA no_subtype FALSE canonical NA NA 2146 None 14 10 1 TRUE 0 0 NA B coding 190 570 32 601 PB.10781.1 chr22 + 1698 13 full-splice_match ADSL ENST00000623063.3 4359 13 40 2621 no_subtype FALSE canonical NA NA 1387 None 48 4 0 FALSE 0 0 NA A coding 484 1452 20 1471 PB.9360.2 chr17 + 2786 17 novel_in_catalog NUP85 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1667 None 2 8 0 FALSE 0 0 NA C coding 630 1890 53 1942 PB.11177.1 chrX - 2789 6 novel_in_catalog ARHGEF6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 179 None 2 9 0 FALSE 0 0 NA B coding 271 813 15 827 PB.6380.2 chr11 - 1417 5 novel_not_in_catalog B3GAT3 novel NA NA NA NA no_subtype FALSE canonical NA NA 90 None 2 2 0 FALSE 0 0 NA C coding 129 387 627 1013 PB.8668.1 chr16 - 1461 6 novel_not_in_catalog TRADD novel NA NA NA NA no_subtype TRUE canonical NA NA 73 None 39 9 0 TRUE 0 0 NA A coding 312 936 82 1017 PB.7709.1 chr14 - 2971 8 novel_not_in_catalog GNPNAT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 180 None 3 26 1 TRUE 0 0 NA B coding 184 552 195 746 PB.7709.2 chr14 - 1638 7 novel_not_in_catalog GNPNAT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 8 15 0 TRUE 0 0 NA B coding 184 552 86 637 PB.7709.3 chr14 - 3111 1 novel_in_catalog GNPNAT1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 7 25 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2595.2 chr3 + 4112 25 novel_not_in_catalog ECT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2793 None 6 16 1 FALSE 0 0 NA C coding 547 1641 1240 2880 PB.7749.2 chr14 + 3830 14 novel_in_catalog HIF1A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2511 None 3 7 0 FALSE 0 0 NA C coding 785 2355 306 2660 PB.5832.8 chr10 - 2953 15 novel_not_in_catalog PSAP novel NA NA NA NA no_subtype FALSE canonical NA NA 68 None 2 4 0 FALSE 0 0 NA B coding 449 1347 465 1811 PB.2595.1 chr3 + 4044 24 full-splice_match ECT2 ENST00000232458.9 4087 24 34 9 no_subtype FALSE canonical NA NA 2726 None 3 10 1 FALSE 0 0 NA C coding 883 2649 165 2813 PB.758.3 chr1 - 5257 5 novel_not_in_catalog ETV3 novel NA NA NA NA no_subtype FALSE canonical NA NA 64 None 5 31 0 FALSE 0 0 NA C coding 512 1536 75 1610 PB.432.1 chr1 + 1965 13 novel_not_in_catalog CTH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1939 None 4 7 0 TRUE 0 0 NA A coding 405 1215 203 1417 PB.3979.3 chr6 + 2773 2 novel_not_in_catalog PTP4A1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2649 None 7 22 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.8664.1 chr16 + 2623 13 novel_not_in_catalog CES2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2162 None 4 9 2 TRUE 0 0 NA B coding 448 1344 1003 2346 PB.6380.1 chr11 - 1441 5 full-splice_match B3GAT3 ENST00000265471.9 1641 5 191 9 no_subtype FALSE canonical NA NA 119 None 7 4 0 FALSE 0 0 NA C coding 335 1005 38 1042 PB.7741.1 chr14 - 2588 2 genic_intron novelGene_573 novel NA NA NA NA no_subtype TRUE canonical NA NA 955 None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4645.1 chr7 + 3293 7 full-splice_match CALU ENST00000249364.8 3357 7 62 2 no_subtype FALSE canonical NA NA 883 None 51 14 0 FALSE 0 0 NA C coding 315 945 41 985 PB.4645.2 chr7 + 3293 7 full-splice_match CALU ENST00000449187.6 2438 7 41 -896 no_subtype FALSE canonical NA NA 883 None 9 14 0 FALSE 0 0 NA C coding 315 945 41 985 PB.9600.1 chr18 - 2687 1 novel_in_catalog RTTN novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA A coding 181 543 31 573 PB.9612.2 chr18 + 2839 3 novel_not_in_catalog RP11-862L9.3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1050 None 2 20 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.3979.1 chr6 + 4314 6 full-splice_match PTP4A1 ENST00000370651.5 5088 6 557 217 no_subtype FALSE canonical NA NA 1000 None 9 26 0 FALSE 0 0 NA C coding 173 519 597 1115 PB.1104.3 chr1 - 2774 18 novel_in_catalog NUP133 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 291 None 3 0 0 FALSE 0 0 NA C coding 871 2613 110 2722 PB.3646.23 chr5 - 1867 1 genic UBTD2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3646.22 chr5 - 2527 2 genic_intron novelGene_1317 novel NA NA NA NA no_subtype FALSE canonical NA NA 2478 None 5 25 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4981.1 chr8 + 3876 6 full-splice_match PI15 ENST00000260113.6 6732 6 -3 2859 no_subtype FALSE canonical NA NA 823 None 2 13 0 FALSE 0 0 NA A coding 258 774 183 956 PB.9028.1 chr17 + 1426 4 novel_not_in_catalog CPD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1192 None 2 5 0 TRUE 0 0 NA B coding 363 1089 9 1097 PB.5022.1 chr8 - 3158 1 incomplete-splice_match TP53INP1 ENST00000448464.6 5631 5 2471 3 no_subtype FALSE canonical NA NA NA None 10 27 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3881.1 chr6 - 1672 8 full-splice_match ETV7 ENST00000340181.8 1719 8 43 4 no_subtype FALSE canonical NA NA 205 None 6 6 0 FALSE 0 0 NA A coding 325 975 248 1222 PB.5022.3 chr8 - 5626 5 full-splice_match TP53INP1 ENST00000448464.6 5631 5 2 3 no_subtype FALSE canonical NA NA 211 None 13 44 1 FALSE 0 0 NA C coding 164 492 362 853 PB.5022.4 chr8 - 5755 5 novel_not_in_catalog TP53INP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 212 None 6 45 0 FALSE 0 0 NA C coding 240 720 529 1248 PB.5022.5 chr8 - 5589 4 full-splice_match TP53INP1 ENST00000342697.4 5638 4 47 2 no_subtype FALSE canonical NA NA 211 None 2 43 0 FALSE 0 0 NA C coding 240 720 362 1081 PB.8777.1 chr16 + 3188 27 full-splice_match ATP2C2 ENST00000262429.8 3376 27 6 182 no_subtype FALSE canonical NA NA 2805 None 43 5 1 FALSE 0 0 NA A coding 946 2838 84 2921 PB.9048.1 chr17 - 3510 3 antisense novelGene_ZNF207_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3468 None 13 27 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.9048.2 chr17 - 3255 1 antisense novelGene_ZNF207_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 12 29 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9887.1 chr19 + 531 5 full-splice_match UBA52 ENST00000442744.6 2845 5 -1 2315 no_subtype FALSE canonical NA NA 352 None 4 1 1 FALSE 0 0 NA A coding 128 384 60 443 PB.6302.4 chr11 + 1390 1 incomplete-splice_match ATG13 ENST00000524625.5 4014 17 2619 6 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3900.2 chr6 - 5492 12 novel_not_in_catalog BTBD9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 72 None 2 37 1 TRUE 0 0 NA A coding 612 1836 100 1935 PB.9235.1 chr17 + 3323 19 incomplete-splice_match ABCC3 ENST00000285238.12 5716 31 1835 558 internal_fragment FALSE canonical NA NA 2720 None 2 10 2 FALSE 0 0 NA A coding 850 2550 277 2826 PB.6302.1 chr11 + 4005 17 full-splice_match ATG13 ENST00000524625.5 4014 17 5 4 no_subtype TRUE canonical NA NA 1743 None 28 13 0 FALSE 0 0 NA C coding 480 1440 379 1818 PB.1462.3 chr2 - 3030 6 full-splice_match CHMP3 ENST00000409810.6 559 6 21 -2492 no_subtype FALSE canonical NA NA 39 None 3 18 0 FALSE 0 0 NA C coding 208 624 37 660 PB.3760.2 chr6 - 3489 1 genic_intron novelGene_140 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1041.1 chr1 + 1934 6 novel_not_in_catalog ATF3 novel NA NA NA NA no_subtype FALSE canonical NA NA 525 None 13 4 0 TRUE 0 0 NA B coding 181 543 175 717 PB.11206.28 chrX - 7006 40 novel_not_in_catalog FLNA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 41 None 2 5 1 TRUE 0 0 NA C coding 2190 6570 117 6686 PB.4063.1 chr6 + 1675 2 genic_intron novelGene_975 novel NA NA NA NA no_subtype FALSE canonical NA NA 1623 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1041.2 chr1 + 1505 1 novel_in_catalog ATF3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 2 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2677.1 chr3 + 5719 1 antisense novelGene_ACAP2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 58 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1845.16 chr2 - 7947 46 full-splice_match FN1 ENST00000446046.5 7952 46 0 5 no_subtype FALSE canonical NA NA 414 None 2 7 0 FALSE 0 0 NA C coding 2330 6990 267 7256 PB.2677.4 chr3 + 2765 2 antisense novelGene_ACAP2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1828 None 5 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6716.1 chr11 - 3744 18 full-splice_match ROBO4 ENST00000306534.7 4710 18 435 531 no_subtype FALSE canonical NA NA 121 None 10 2 0 FALSE 0 0 NA A coding 1007 3021 52 3072 PB.1108.3 chr1 + 3560 2 genic_intron novelGene_1409 novel NA NA NA NA no_subtype FALSE canonical NA NA 2272 None 2 19 1 FALSE 0 0 NA A coding 106 318 1048 1365 PB.8716.1 chr16 - 3287 21 full-splice_match AARS ENST00000261772.12 3477 21 64 126 no_subtype FALSE canonical NA NA 59 None 136 2 0 FALSE 0 0 NA A coding 968 2904 81 2984 PB.2.1 chr1 + 626 2 full-splice_match ISG15 ENST00000379389.4 711 2 80 5 no_subtype FALSE canonical NA NA 74 None 2 2 0 FALSE 0 0 NA A coding 165 495 72 566 PB.1810.1 chr2 + 1616 2 novel_not_in_catalog CD28 novel NA NA NA NA no_subtype FALSE canonical NA NA 252 None 9 14 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.10687.11 chr22 - 1936 13 novel_not_in_catalog AP1B1 novel NA NA NA NA no_subtype FALSE canonical NA NA 142 None 2 3 0 TRUE 0 0 NA B coding 484 1452 170 1621 PB.491.1 chr1 - 3253 1 antisense novelGene_MTF2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 32 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4498.2 chr7 - 1578 3 full-splice_match MTERF1 ENST00000351870.7 1997 3 6 413 no_subtype FALSE canonical NA NA 58 None 5 2 0 FALSE 0 0 NA C coding 399 1197 89 1285 PB.4498.3 chr7 - 1582 3 novel_not_in_catalog MTERF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 63 None 3 0 0 FALSE 0 0 NA C coding 399 1197 94 1290 PB.4257.1 chr6 + 3075 13 novel_not_in_catalog FAM120B novel NA NA NA NA no_subtype FALSE canonical NA NA 2762 None 56 3 0 TRUE 0 0 NA B coding 886 2658 91 2748 PB.4257.3 chr6 + 3073 13 novel_not_in_catalog FAM120B novel NA NA NA NA no_subtype TRUE canonical NA NA 2758 None 2 10 1 TRUE 0 0 NA B coding 874 2622 123 2744 PB.4257.2 chr6 + 2868 12 novel_not_in_catalog FAM120B novel NA NA NA NA no_subtype FALSE canonical NA NA 2555 None 22 3 0 TRUE 0 0 NA B coding 817 2451 91 2541 PB.4257.4 chr6 + 3162 11 novel_not_in_catalog FAM120B novel NA NA NA NA no_subtype TRUE canonical NA NA 2640 None 2 14 0 TRUE 0 0 NA B coding 855 2565 110 2674 PB.4257.7 chr6 + 3120 15 novel_not_in_catalog FAM120B novel NA NA NA NA no_subtype TRUE canonical NA NA 2806 None 2 5 0 TRUE 0 0 NA B coding 886 2658 135 2792 PB.4257.6 chr6 + 3236 12 novel_not_in_catalog FAM120B novel NA NA NA NA no_subtype FALSE canonical NA NA 2714 None 2 8 0 TRUE 0 0 NA B coding 886 2658 91 2748 PB.10794.1 chr22 - 980 5 novel_not_in_catalog PHF5A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 75 None 7 8 1 TRUE 0 0 NA A coding 110 330 24 353 PB.1399.2 chr2 + 1532 3 novel_in_catalog MXD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 390 None 15 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3228.1 chr5 + 5226 7 novel_not_in_catalog C5orf51 novel NA NA NA NA no_subtype FALSE canonical NA NA 4348 None 3 27 1 TRUE 0 0 NA A coding 294 882 23 904 PB.1108.2 chr1 + 4415 17 novel_not_in_catalog GALNT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1599 None 10 12 0 TRUE 0 0 NA B coding 571 1713 40 1752 PB.6617.9 chr11 - 1367 12 novel_not_in_catalog CASP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 49 None 2 2 0 TRUE 0 0 NA C coding 404 1212 43 1254 PB.10228.12 chr20 - 1418 8 novel_not_in_catalog SIRPB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 133 None 7 9 3 TRUE 0 0 NA B coding 268 804 347 1150 PB.6822.1 chr12 + 1424 7 novel_not_in_catalog CLEC12A novel NA NA NA NA no_subtype FALSE canonical NA NA 701 None 3 4 0 FALSE 0 0 NA A coding 191 573 283 855 PB.2734.2 chr4 + 1927 2 genic_intron novelGene_46 novel NA NA NA NA no_subtype TRUE canonical NA NA 1865 None 2 9 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7512.1 chr13 - 4122 26 novel_not_in_catalog DIAPH3 novel NA NA NA NA no_subtype TRUE canonical NA NA 43 None 2 19 1 TRUE 0 0 NA A coding 1009 3027 101 3127 PB.2472.1 chr3 - 6854 1 genic_intron novelGene_1136 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 66 0 FALSE 0 0 NA A coding 100 300 5471 5770 PB.6617.3 chr11 - 1517 12 novel_not_in_catalog CASP1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 33 None 3 1 0 TRUE 0 0 NA C coding 404 1212 27 1238 PB.8419.1 chr16 - 1473 11 novel_not_in_catalog ROGDI novel NA NA NA NA no_subtype FALSE canonical NA NA 163 None 21 6 1 FALSE 0 0 NA B coding 286 858 119 976 PB.6617.1 chr11 - 1348 11 fusion CARD16,CASP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 35 None 10 2 0 TRUE 0 0 NA B coding 404 1212 29 1240 PB.5598.1 chr9 - 3503 19 novel_not_in_catalog RALGDS novel NA NA NA NA no_subtype FALSE canonical NA NA 191 None 16 8 0 TRUE 0 0 NA B coding 897 2691 60 2750 PB.6617.7 chr11 - 1369 10 full-splice_match CASP1 ENST00000436863.7 1477 10 93 15 no_subtype FALSE canonical NA NA 51 None 9 3 0 FALSE 0 0 NA C coding 404 1212 45 1256 PB.6617.5 chr11 - 3077 9 novel_not_in_catalog CASP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 33 None 2 10 1 TRUE 0 0 NA C coding 194 582 1748 2329 PB.6617.4 chr11 - 1486 11 fusion CARD16,CASP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 45 None 4 4 0 TRUE 0 0 NA B coding 404 1212 39 1250 PB.2831.1 chr4 - 3704 24 novel_not_in_catalog NFXL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 52 None 2 13 0 TRUE 0 0 NA A coding 911 2733 55 2787 PB.3387.3 chr5 + 2903 32 novel_not_in_catalog CAST novel NA NA NA NA no_subtype FALSE canonical NA NA 2488 None 4 5 0 TRUE 0 0 NA B coding 769 2307 156 2462 PB.8533.3 chr16 + 1949 13 full-splice_match SPNS1 ENST00000565975.5 1979 13 21 9 no_subtype FALSE canonical NA NA 1614 None 2 0 0 FALSE 0 0 NA C coding 528 1584 123 1706 PB.3387.6 chr5 + 2676 3 genic_intron novelGene_881 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2017 None 2 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3387.4 chr5 + 2964 32 novel_not_in_catalog CAST novel NA NA NA NA no_subtype FALSE canonical NA NA 2374 None 32 4 0 TRUE 0 0 NA B coding 754 2262 87 2348 PB.8533.4 chr16 + 2183 12 full-splice_match SPNS1 ENST00000311008.15 2208 12 18 7 no_subtype FALSE canonical NA NA 1851 None 2 5 0 FALSE 0 0 NA C coding 528 1584 360 1943 PB.5257.1 chr9 + 1721 9 full-splice_match DNAJA1 ENST00000330899.4 2381 9 65 595 no_subtype FALSE canonical NA NA 1093 None 142 2 0 FALSE 0 0 NA A coding 397 1191 119 1309 PB.9241.1 chr17 + 690 5 full-splice_match NME2 ENST00000512737.5 826 5 128 8 no_subtype FALSE canonical NA NA 437 None 3 0 0 FALSE 0 0 NA A coding 152 456 97 552 PB.11180.1 chrX - 2783 2 genic ATP11C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2661 None 3 17 1 TRUE 0 0 NA B coding 106 318 1093 1410 PB.7959.64 chr14 - 1492 8 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 83 None 2 12 4 TRUE 0 0 NA B coding 149 447 17 463 PB.2012.6 chr3 - 6991 3 genic_intron novelGene_104 novel NA NA NA NA no_subtype FALSE canonical NA NA 2123 None 2 40 2 FALSE 0 0 NA A coding 111 333 4228 4560 PB.6350.8 chr11 + 2546 7 novel_not_in_catalog MS4A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 742 None 2 10 2 FALSE 0 0 NA B coding 149 447 512 958 PB.3499.1 chr5 - 2739 17 novel_not_in_catalog KLHL3 novel NA NA NA NA no_subtype TRUE canonical NA NA 174 None 7 6 1 TRUE 0 0 NA A coding 587 1761 161 1921 PB.8613.2 chr16 + 2530 1 genic_intron novelGene_529 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6571.1 chr11 - 1583 10 novel_not_in_catalog CCDC90B novel NA NA NA NA no_subtype FALSE canonical NA NA 489 None 3 4 0 TRUE 0 0 NA A coding 254 762 390 1151 PB.2155.1 chr3 - 1442 1 genic_intron novelGene_467 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9166.9 chr17 - 3036 20 novel_not_in_catalog UBTF novel NA NA NA NA no_subtype FALSE canonical NA NA 141 None 2 9 0 FALSE 0 0 NA C coding 727 2181 209 2389 PB.10508.1 chr21 - 1661 1 genic_intron novelGene_245 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2510.3 chr3 + 3693 16 full-splice_match PLS1 ENST00000337777.7 3755 16 62 0 no_subtype FALSE canonical NA NA 1905 None 6 18 0 FALSE 0 0 NA C coding 629 1887 152 2038 PB.7713.2 chr14 - 1380 5 full-splice_match CNIH1 ENST00000216416.8 4793 5 40 3373 no_subtype FALSE canonical NA NA 145 None 19 5 0 FALSE 0 0 NA C coding 144 432 65 496 PB.9166.5 chr17 - 3037 20 full-splice_match UBTF ENST00000343638.9 4684 20 84 1563 no_subtype FALSE canonical NA NA 140 None 19 9 1 FALSE 0 0 NA C coding 727 2181 208 2388 PB.9166.4 chr17 - 3333 20 novel_in_catalog UBTF novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 436 None 4 5 0 FALSE 0 0 NA C coding 727 2181 504 2684 PB.9166.7 chr17 - 2949 20 full-splice_match UBTF ENST00000393606.7 2683 20 252 -518 no_subtype FALSE canonical NA NA 54 None 14 14 2 FALSE 0 0 NA C coding 727 2181 122 2302 PB.9166.6 chr17 - 2939 22 novel_not_in_catalog UBTF novel NA NA NA NA no_subtype FALSE non_canonical NA NA 33 None 3 7 2 TRUE 0 0 NA C coding 727 2181 110 2290 PB.10888.1 chrX + 1473 11 full-splice_match PDHA1 ENST00000422285.6 3310 11 -3 1840 no_subtype FALSE canonical NA NA 1116 None 47 5 0 FALSE 0 0 NA A coding 390 1170 109 1278 PB.9166.3 chr17 - 3121 21 novel_in_catalog UBTF novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 115 None 7 7 0 FALSE 0 0 NA C coding 764 2292 183 2474 PB.9166.2 chr17 - 2943 20 novel_not_in_catalog UBTF novel NA NA NA NA no_subtype TRUE non_canonical NA NA 42 None 5 7 1 TRUE 0 0 NA C coding 727 2181 112 2292 PB.7920.1 chr14 - 4417 2 genic AL157871.2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1693 None 2 31 0 TRUE 0 0 NA A coding 121 363 1174 1536 PB.1379.1 chr2 - 5924 2 antisense novelGene_AC007386.4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 4337 None 2 40 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.69 chr14 - 1487 8 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 85 None 2 14 4 TRUE 0 0 NA B coding 289 867 40 906 PB.4247.1 chr6 - 1036 8 full-splice_match SFT2D1 ENST00000361731.3 1079 8 29 14 no_subtype FALSE canonical NA NA 144 None 4 4 0 FALSE 0 0 NA C coding 159 477 82 558 PB.8794.1 chr16 - 2886 1 genic_intron novelGene_779 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1531.1 chr2 - 1854 16 novel_not_in_catalog UXS1 novel NA NA NA NA no_subtype TRUE canonical NA NA 156 None 2 4 0 TRUE 0 0 NA B coding 235 705 437 1141 PB.9844.1 chr19 + 1834 3 genic_intron novelGene_139 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 303 None 2 9 1 FALSE 0 0 NA A coding 109 327 1191 1517 PB.6142.2 chr11 + 2701 3 antisense novelGene_NAP1L4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2398 None 3 17 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.5348.1 chr9 + 3643 1 incomplete-splice_match NTRK2 ENST00000359847.3 6646 12 3000 4 no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6142.1 chr11 - 2463 16 full-splice_match NAP1L4 ENST00000380542.8 2511 16 51 -3 no_subtype FALSE canonical NA NA 73 None 3 9 0 FALSE 0 0 NA C coding 375 1125 91 1215 PB.5473.2 chr9 - 5795 38 novel_not_in_catalog CDK5RAP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 235 None 2 3 0 FALSE 0 0 NA B coding 1860 5580 180 5759 PB.5473.3 chr9 + 2663 3 antisense novelGene_MEGF9_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 173 None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5473.1 chr9 - 5877 39 novel_not_in_catalog CDK5RAP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 220 None 8 0 0 FALSE 0 0 NA B coding 1892 5676 165 5840 PB.3821.1 chr6 - 974 6 full-splice_match CLIC1 ENST00000375784.7 1254 6 252 28 no_subtype FALSE canonical NA NA 54 None 31 0 0 FALSE 0 0 NA A coding 241 723 16 738 PB.4784.1 chr8 - 5519 10 novel_not_in_catalog SGK223 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 119 None 2 14 2 TRUE 0 0 NA B coding 1383 4149 954 5102 PB.9670.1 chr19 - 1634 6 novel_not_in_catalog DOHH novel NA NA NA NA no_subtype TRUE non_canonical NA NA 128 None 30 4 0 TRUE 0 0 NA A coding 302 906 201 1106 PB.4784.3 chr8 - 3096 5 novel_not_in_catalog SGK223 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 119 None 3 32 1 TRUE 0 0 NA B coding 721 2163 207 2369 PB.3159.1 chr5 + 1106 6 full-splice_match PDCD6 ENST00000264933.8 1135 6 25 4 no_subtype FALSE canonical NA NA 552 None 5 2 0 FALSE 0 0 NA C coding 191 573 76 648 PB.4686.5 chr7 + 1423 1 incomplete-splice_match CALD1 ENST00000361901.6 4114 14 2685 7 no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3159.2 chr5 + 1100 6 full-splice_match PDCD6 ENST00000507528.5 1088 6 -11 -1 no_subtype FALSE canonical NA NA 546 None 2 2 0 FALSE 0 0 NA C coding 189 567 76 642 PB.7097.1 chr12 + 3811 13 full-splice_match HELB ENST00000247815.8 12866 13 44 9011 no_subtype FALSE canonical NA NA 3177 None 2 5 0 FALSE 0 0 NA A coding 1087 3261 16 3276 PB.5368.1 chr9 - 1703 3 novel_not_in_catalog OMD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 141 None 2 9 1 FALSE 0 0 NA A coding 421 1263 157 1419 PB.4686.2 chr7 + 1443 5 incomplete-splice_match CALD1 ENST00000361675.6 3612 15 -13 2182 3prime_fragment FALSE canonical NA NA 460 None 2 3 0 FALSE 0 0 NA C coding 400 1200 243 1442 PB.10479.2 chr20 + 1494 5 full-splice_match GID8 ENST00000266069.4 4397 5 65 2838 no_subtype FALSE canonical NA NA 595 None 14 6 0 FALSE 0 0 NA C coding 228 684 83 766 PB.10019.12 chr19 + 3255 29 novel_not_in_catalog ARHGEF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2915 None 2 4 1 FALSE 0 0 NA C coding 824 2472 114 2585 PB.1825.7 chr2 + 5687 2 novel_not_in_catalog CREB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4132 None 2 36 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.4878.2 chr8 + 4184 6 novel_not_in_catalog BAG4 novel NA NA NA NA no_subtype FALSE canonical NA NA 900 None 5 13 1 TRUE 0 0 NA B coding 456 1368 16 1383 PB.7170.1 chr12 + 3399 13 novel_not_in_catalog METAP2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3055 None 2 13 1 TRUE 0 0 NA C coding 478 1434 80 1513 PB.1825.3 chr2 + 2742 8 full-splice_match CREB1 ENST00000353267.7 7588 8 98 4748 no_subtype FALSE canonical NA NA 972 None 12 11 0 FALSE 0 0 NA C coding 325 975 140 1114 PB.1825.2 chr2 + 2635 9 full-splice_match CREB1 ENST00000432329.6 7650 9 65 4950 no_subtype FALSE canonical NA NA 1067 None 7 12 2 FALSE 0 0 NA C coding 339 1017 193 1209 PB.6963.1 chr12 + 2879 8 full-splice_match GPD1 ENST00000301149.7 3082 8 191 12 no_subtype TRUE canonical NA NA 994 None 8 6 0 FALSE 0 0 NA A coding 349 1047 42 1088 PB.6035.1 chr10 + 1551 1 incomplete-splice_match NHLRC2 ENST00000369301.3 11051 11 9495 6 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10984.4 chrX - 2625 16 incomplete-splice_match SMC1A ENST00000322213.8 9784 25 27 7132 internal_fragment FALSE canonical NA NA 210 None 12 1 0 FALSE 0 0 NA C coding 841 2523 102 2624 PB.9733.1 chr19 + 1864 7 full-splice_match ANGPTL4 ENST00000301455.6 1879 7 11 4 no_subtype FALSE canonical NA NA 1199 None 9 4 0 FALSE 0 0 NA A coding 406 1218 161 1378 PB.3474.2 chr5 + 2589 6 novel_in_catalog HSPA4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 753 None 2 13 0 FALSE 0 0 NA C coding 235 705 225 929 PB.3474.1 chr5 + 4374 19 full-splice_match HSPA4 ENST00000304858.6 4825 19 88 363 no_subtype FALSE canonical NA NA 2520 None 125 6 0 FALSE 0 0 NA C coding 840 2520 202 2721 PB.1669.1 chr2 - 3585 16 full-splice_match IFIH1 ENST00000263642.2 3595 16 5 5 no_subtype FALSE canonical NA NA 844 None 85 2 0 FALSE 0 0 NA C coding 1025 3075 392 3466 PB.1531.3 chr2 - 1691 18 novel_not_in_catalog UXS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 152 None 2 6 0 TRUE 0 0 NA B coding 420 1260 59 1318 PB.4878.1 chr8 + 1846 7 novel_not_in_catalog BAG4 novel NA NA NA NA no_subtype FALSE canonical NA NA 891 None 3 1 0 TRUE 0 0 NA B coding 457 1371 4 1374 PB.4085.1 chr6 + 788 6 full-splice_match GTF3C6 ENST00000329970.7 952 6 143 21 no_subtype FALSE canonical NA NA 428 None 2 2 0 FALSE 0 0 NA A coding 213 639 68 706 PB.9142.1 chr17 - 2731 5 novel_not_in_catalog RAMP2-AS1 novel NA NA NA NA no_subtype TRUE canonical NA NA 145 None 2 13 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.253.1 chr1 - 827 6 full-splice_match PSMB2 ENST00000373237.3 2701 6 318 1556 no_subtype FALSE canonical NA NA 185 None 2 2 0 FALSE 0 0 NA A coding 201 603 95 697 PB.7487.1 chr13 - 1940 1 antisense novelGene_FNDC3A_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7639.2 chr14 - 2858 7 novel_not_in_catalog RIPK3 novel NA NA NA NA no_subtype FALSE canonical NA NA 522 None 2 12 1 TRUE 0 0 NA C coding 118 354 551 904 PB.2695.1 chr3 + 3376 9 full-splice_match FYTTD1 ENST00000241502.8 6866 9 205 3285 no_subtype FALSE canonical NA NA 875 None 89 15 0 FALSE 0 0 NA A coding 318 954 18 971 PB.1527.1 chr2 - 2992 8 novel_not_in_catalog MFSD9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 223 None 2 21 1 TRUE 0 0 NA A coding 474 1422 59 1480 PB.10984.1 chrX - 5400 25 full-splice_match SMC1A ENST00000322213.8 9784 25 75 4309 no_subtype TRUE canonical NA NA 162 None 50 4 0 FALSE 0 0 NA C coding 1233 3699 54 3752 PB.122.3 chr1 - 2784 1 genic_intron novelGene_211 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8459.14 chr16 - 1561 5 incomplete-splice_match MYH11 ENST00000396324.7 6847 42 5314 -28 5prime_fragment FALSE canonical NA NA 90 None 3 7 0 FALSE 0 0 NA C coding 221 663 49 711 PB.8459.17 chr16 - 3972 21 novel_not_in_catalog MYH11 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 66 None 2 10 2 TRUE 0 0 NA C coding 1062 3186 49 3234 PB.3545.13 chr5 - 1570 1 antisense novelGene_CTD-2024I7.13_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8459.19 chr16 - 6909 42 full-splice_match MYH11 ENST00000576790.6 6272 42 6 -643 no_subtype FALSE canonical NA NA 87 None 2 12 1 FALSE 0 0 NA C coding 1938 5814 105 5918 PB.3461.3 chr5 - 2625 13 incomplete-splice_match FNIP1 ENST00000307968.11 6388 17 -87 3850 internal_fragment FALSE canonical NA NA 179 None 2 2 0 FALSE 0 0 NA B coding 846 2538 88 2625 PB.5243.1 chr9 - 2840 3 novel_not_in_catalog CDKN2B novel NA NA NA NA no_subtype FALSE canonical NA NA 508 None 43 15 0 TRUE 0 0 NA A coding 131 393 374 766 PB.8779.1 chr16 - 1809 4 full-splice_match COTL1 ENST00000262428.4 1843 4 17 17 no_subtype FALSE canonical NA NA 223 None 302 2 0 FALSE 0 0 NA C coding 142 426 147 572 PB.8779.6 chr16 - 2082 3 novel_in_catalog COTL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 578 None 5 5 0 FALSE 0 0 NA C coding 73 219 626 844 PB.8779.7 chr16 - 1580 3 novel_not_in_catalog COTL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 77 None 2 2 0 FALSE 0 0 NA C coding 98 294 50 343 PB.8684.1 chr16 + 4756 29 full-splice_match EDC4 ENST00000358933.9 4800 29 40 4 no_subtype FALSE canonical NA NA 4212 None 3 5 0 FALSE 0 0 NA A coding 1401 4203 200 4402 PB.4334.1 chr7 - 1464 3 full-splice_match CYCS ENST00000409409.5 974 3 -11 -479 no_subtype FALSE canonical NA NA 265 None 4 6 0 FALSE 0 0 NA C coding 105 315 274 588 PB.10683.1 chr22 + 3904 5 full-splice_match CCDC117 ENST00000249064.8 3985 5 78 3 no_subtype FALSE canonical NA NA 700 None 18 24 0 FALSE 0 0 NA A coding 279 837 99 935 PB.5219.3 chr9 + 3030 2 genic_intron novelGene_41 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 173 None 2 23 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4334.2 chr7 - 1329 3 full-splice_match CYCS ENST00000305786.6 4098 3 25 2744 no_subtype FALSE canonical NA NA 137 None 11 6 0 FALSE 0 0 NA C coding 105 315 146 460 PB.4261.2 chr7 + 4334 22 novel_in_catalog SUN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2658 None 30 11 0 FALSE 0 0 NA C coding 916 2748 25 2772 PB.4261.3 chr7 + 4303 22 novel_not_in_catalog SUN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2625 None 2 16 1 FALSE 0 0 NA C coding 905 2715 25 2739 PB.4261.1 chr7 + 4246 21 novel_in_catalog SUN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2559 None 4 13 0 FALSE 0 0 NA C coding 866 2598 76 2673 PB.4261.6 chr7 + 4230 21 novel_in_catalog SUN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2544 None 2 18 0 FALSE 0 0 NA C coding 878 2634 25 2658 PB.4261.4 chr7 + 4407 22 novel_not_in_catalog SUN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2721 None 2 20 0 FALSE 0 0 NA C coding 937 2811 25 2835 PB.4261.5 chr7 + 4062 20 full-splice_match SUN1 ENST00000405266.5 4062 20 0 0 no_subtype FALSE canonical NA NA 2376 None 3 12 0 FALSE 0 0 NA C coding 822 2466 25 2490 PB.3454.1 chr5 - 617 3 full-splice_match HINT1 ENST00000304043.9 1081 3 193 271 no_subtype FALSE canonical NA NA 198 None 4 0 0 FALSE 0 0 NA A coding 126 378 88 465 PB.4261.8 chr7 + 2680 4 novel_not_in_catalog SUN1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 994 None 2 19 0 TRUE 0 0 NA C coding 101 303 806 1108 PB.4261.9 chr7 + 1501 1 incomplete-splice_match SUN1 ENST00000497943.1 2824 3 1321 3 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6633.1 chr11 + 3489 23 novel_in_catalog ATM novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2989 None 2 3 0 FALSE 0 0 NA B coding 1031 3093 78 3170 PB.8308.1 chr15 + 3004 1 genic_intron novelGene_842 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.118.2 chr1 - 3891 22 novel_in_catalog HSPG2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 99 None 2 4 0 FALSE 0 0 NA A coding 812 2436 384 2819 PB.6858.1 chr12 + 1694 8 full-splice_match CMAS ENST00000229329.6 1787 8 99 -6 no_subtype FALSE canonical NA NA 1145 None 55 3 0 FALSE 0 0 NA A coding 434 1302 32 1333 PB.774.4 chr1 - 5911 6 novel_not_in_catalog AIM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 134 None 4 38 1 TRUE 0 0 NA C coding 238 714 4989 5702 PB.1637.1 chr2 + 1375 2 incomplete-splice_match EPC2 ENST00000258484.10 3649 14 2266 8 internal_fragment FALSE canonical NA NA 119 None 2 2 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4494.10 chr7 - 1570 3 novel_in_catalog STEAP4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 112 None 11 1 0 FALSE 0 0 NA C coding 339 1017 115 1131 PB.8293.19 chr15 + 1313 1 incomplete-splice_match IQGAP1 ENST00000268182.9 7233 38 5920 1 no_subtype FALSE canonical NA NA NA None 10 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5142.5 chr8 + 5498 24 novel_not_in_catalog DENND3 novel NA NA NA NA no_subtype FALSE canonical NA NA 4780 None 3 16 2 TRUE 0 0 NA B coding 1099 3297 69 3365 PB.3922.1 chr6 - 1712 2 genic PRPH2 novel NA NA NA NA no_subtype TRUE canonical NA NA 25 None 7 7 0 TRUE 0 0 NA A coding 99 297 485 781 PB.8293.15 chr15 + 2855 12 incomplete-splice_match IQGAP1 ENST00000560738.1 3602 25 1759 -1012 internal_fragment FALSE canonical NA NA 1466 None 4 8 0 FALSE 0 0 NA C coding 520 1560 18 1577 PB.1953.2 chr2 - 3257 2 full-splice_match COPS9 ENST00000403160.4 609 2 502 -3150 no_subtype FALSE canonical NA NA 84 None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5116.1 chr8 + 1459 8 novel_not_in_catalog NSMCE2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 716 None 2 3 2 TRUE 0 0 NA B coding 179 537 99 635 PB.2236.1 chr3 + 3778 5 full-splice_match GLYCTK ENST00000436784.6 1982 5 -9 -1787 no_subtype TRUE canonical NA NA 774 None 8 12 1 FALSE 0 0 NA C coding 523 1569 70 1638 PB.6735.5 chr11 + 2488 1 genic_intron novelGene_1112 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1531.4 chr2 - 3809 1 genic_intron novelGene_957 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A coding 98 294 25 318 PB.10562.2 chr21 + 6145 1 antisense novelGene_SPATA20P1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.229 chr14 - 1550 11 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 88 None 2 12 5 TRUE 0 0 NA B coding 196 588 831 1418 PB.6735.2 chr11 + 2797 8 novel_in_catalog FLI1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 840 None 4 6 0 FALSE 0 0 NA C coding 432 1296 72 1367 PB.1940.4 chr2 + 3001 6 novel_not_in_catalog LRRFIP1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 64 None 3 22 5 TRUE 0 0 NA C coding 119 357 1083 1439 PB.4120.5 chr6 - 3276 1 genic_intron novelGene_1107 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3286.1 chr5 - 1707 2 genic_intron novelGene_591 novel NA NA NA NA no_subtype FALSE canonical NA NA 464 None 2 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7827.1 chr14 + 3613 11 novel_not_in_catalog FLVCR2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1845 None 2 12 1 TRUE 0 0 NA A coding 509 1527 388 1914 PB.4269.2 chr7 + 2016 1 novel_in_catalog CHST12 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 12 7 0 FALSE 0 0 NA B coding 414 1242 80 1321 PB.376.2 chr1 - 2979 5 novel_in_catalog C1orf123 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 29 None 3 13 0 FALSE 0 0 NA B coding 119 357 2065 2421 PB.1283.2 chr2 - 2799 3 full-splice_match CYP1B1 ENST00000610745.4 5250 3 25 2426 no_subtype FALSE canonical NA NA 377 None 12 6 0 FALSE 0 0 NA C coding 543 1629 379 2007 PB.592.7 chr1 - 3512 18 novel_in_catalog CSDE1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 59 None 3 7 0 FALSE 0 0 NA C coding 731 2193 447 2639 PB.592.5 chr1 - 3427 19 novel_not_in_catalog CSDE1 novel NA NA NA NA no_subtype FALSE canonical NA NA 59 None 4 12 1 FALSE 0 0 NA C coding 668 2004 549 2552 PB.6350.1 chr11 + 2590 7 novel_not_in_catalog MS4A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 772 None 390 11 2 FALSE 0 0 NA B coding 149 447 542 988 PB.4708.5 chr7 + 6071 4 genic_intron novelGene_1180 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4460 None 3 27 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.3178.1 chr5 + 1890 11 full-splice_match CCT5 ENST00000280326.8 3675 11 378 1407 no_subtype FALSE canonical NA NA 1540 None 109 2 0 FALSE 0 0 NA A coding 541 1623 43 1665 PB.10074.1 chr19 - 783 5 full-splice_match AP2S1 ENST00000263270.10 935 5 147 5 no_subtype FALSE canonical NA NA 82 None 6 1 0 FALSE 0 0 NA A coding 142 426 80 505 PB.1574.1 chr2 - 1700 13 novel_not_in_catalog BIN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 65 None 8 3 0 FALSE 0 0 NA B coding 385 1155 54 1208 PB.5562.1 chr9 + 1590 2 genic NTMT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 464 None 4 11 1 TRUE 0 0 NA A coding 120 360 473 832 PB.4120.6 chr6 - 1484 1 genic_intron novelGene_1108 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5631.1 chr9 - 2015 2 full-splice_match FUT7 ENST00000314412.6 2584 2 556 13 no_subtype FALSE canonical NA NA 476 None 15 5 0 FALSE 0 0 NA A coding 342 1026 464 1489 PB.10964.1 chrX - 1873 1 novel_in_catalog TFE3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA C coding 50 150 294 443 PB.8046.1 chr15 - 1745 11 full-splice_match ELL3 ENST00000319359.7 2352 11 575 32 no_subtype FALSE canonical NA NA 199 None 22 3 0 FALSE 0 0 NA C coding 397 1191 68 1258 PB.4894.5 chr8 - 2501 9 novel_not_in_catalog KAT6A novel NA NA NA NA no_subtype FALSE canonical NA NA 87 None 3 6 0 TRUE 0 0 NA C coding 520 1560 413 1972 PB.3809.1 chr6 - 960 4 full-splice_match LTB ENST00000429299.2 897 4 -72 9 no_subtype FALSE canonical NA NA 242 None 14 0 0 FALSE 0 0 NA A coding 244 732 81 812 PB.8046.2 chr15 - 1720 11 novel_not_in_catalog ELL3 novel NA NA NA NA no_subtype FALSE canonical NA NA 199 None 2 3 0 FALSE 0 0 NA C coding 389 1167 68 1234 PB.4894.1 chr8 - 6737 17 full-splice_match KAT6A ENST00000265713.6 9153 17 0 2416 no_subtype FALSE canonical NA NA 87 None 2 9 0 FALSE 0 0 NA C coding 2004 6012 413 6424 PB.4894.2 chr8 - 3411 12 novel_not_in_catalog KAT6A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 87 None 2 11 1 TRUE 0 0 NA C coding 582 1746 413 2158 PB.4894.3 chr8 - 3413 13 novel_not_in_catalog KAT6A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 89 None 3 10 0 TRUE 0 0 NA C coding 582 1746 415 2160 PB.7325.2 chr12 + 1597 11 full-splice_match P2RX4 ENST00000543984.5 1612 11 10 5 no_subtype FALSE canonical NA NA 1018 None 8 2 0 FALSE 0 0 NA C coding 287 861 182 1042 PB.3914.1 chr6 - 3680 1 novel_in_catalog MED20 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 12 24 0 FALSE 0 0 NA C coding 115 345 1867 2211 PB.3914.2 chr6 - 2456 4 full-splice_match MED20 ENST00000265350.8 2438 4 -20 2 no_subtype FALSE canonical NA NA 115 None 18 7 0 FALSE 0 0 NA C coding 212 636 102 737 PB.3914.3 chr6 - 2940 5 novel_not_in_catalog MED20 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 415 None 2 13 0 TRUE 0 0 NA C coding 204 612 593 1204 PB.3262.6 chr5 - 3283 17 full-splice_match IL6ST ENST00000381298.6 9057 17 42 5732 no_subtype FALSE canonical NA NA 168 None 46 0 0 FALSE 0 0 NA C coding 918 2754 272 3025 PB.3657.1 chr5 - 2782 9 novel_not_in_catalog KIAA1191 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 158 None 48 10 0 FALSE 0 0 NA A coding 286 858 388 1245 PB.10449.1 chr20 + 2935 2 genic_intron novelGene_525 novel NA NA NA NA no_subtype FALSE canonical NA NA 1941 None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2972.3 chr4 - 1997 2 novel_not_in_catalog LAMTOR3 novel NA NA NA NA no_subtype FALSE canonical NA NA 650 None 2 19 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.10312.1 chr20 - 2703 3 full-splice_match BCL2L1 ENST00000307677.4 2610 3 -107 14 no_subtype FALSE canonical NA NA 388 None 23 5 0 FALSE 0 0 NA C coding 233 699 519 1217 PB.2972.1 chr4 - 5415 3 genic LAMTOR3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 622 None 2 46 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.10886.3 chrX - 1999 12 full-splice_match RBBP7 ENST00000380084.8 2036 12 30 7 no_subtype FALSE canonical NA NA 363 None 3 2 0 FALSE 0 0 NA C coding 469 1407 216 1622 PB.10554.1 chr21 + 1524 1 full-splice_match MEMO1P1 ENST00000452572.1 888 1 -104 -532 no_subtype FALSE canonical NA NA NA None 14 3 0 FALSE 0 0 NA A coding 295 885 105 989 PB.10047.2 chr19 + 1972 6 full-splice_match NECTIN2 ENST00000252485.8 2112 6 125 15 no_subtype FALSE canonical NA NA 1268 None 7 4 0 FALSE 0 0 NA C coding 479 1437 227 1663 PB.5845.1 chr10 - 3644 29 novel_not_in_catalog CFAP70 novel NA NA NA NA no_subtype TRUE canonical NA NA 32 None 2 9 3 FALSE 0 0 NA A coding 1121 3363 72 3434 PB.7218.2 chr12 - 1611 2 full-splice_match MTERF2 ENST00000548101.1 715 2 -61 -835 no_subtype FALSE canonical NA NA 183 None 2 4 0 FALSE 0 0 NA C coding 385 1155 241 1395 PB.7218.1 chr12 - 3243 2 full-splice_match MTERF2 ENST00000552029.1 3235 2 -25 17 no_subtype FALSE canonical NA NA 2037 None 30 20 0 FALSE 0 0 NA C coding 383 1149 2095 3243 PB.10886.4 chrX - 1845 13 novel_not_in_catalog RBBP7 novel NA NA NA NA no_subtype FALSE canonical NA NA 27 None 3 2 0 TRUE 0 0 NA C coding 425 1275 194 1468 PB.2046.1 chr3 + 2786 2 genic_intron novelGene_192 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 584 None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7136.11 chr12 - 2070 14 novel_in_catalog PPP1R12A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 493 None 4 1 0 FALSE 0 0 NA C coding 602 1806 263 2068 PB.8753.1 chr16 - 2212 16 novel_not_in_catalog KARS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 85 None 2 5 0 TRUE 0 0 NA C coding 625 1875 120 1994 PB.10429.7 chr20 + 2642 2 antisense novelGene_SULF2_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 22 None 4 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10429.4 chr20 + 2616 2 genic_intron novelGene_471 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 21 None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10429.3 chr20 + 5343 23 full-splice_match NCOA3 ENST00000372004.7 7939 23 34 2562 no_subtype FALSE canonical NA NA 4433 None 12 13 0 FALSE 0 0 NA C coding 1420 4260 183 4442 PB.10429.1 chr20 + 1730 3 novel_in_catalog NCOA3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 179 None 9 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1400.1 chr2 + 1425 1 full-splice_match PCBP1 ENST00000303577.6 1750 1 270 55 no_subtype FALSE canonical NA NA NA None 31 0 0 FALSE 0 0 NA A coding 356 1068 21 1088 PB.1903.1 chr2 - 2552 3 full-splice_match PID1 ENST00000392055.7 2533 3 0 -19 no_subtype FALSE canonical NA NA 272 None 2 11 0 FALSE 0 0 NA A coding 217 651 243 893 PB.7807.1 chr14 + 1536 12 full-splice_match COQ6 ENST00000334571.6 2118 12 17 565 no_subtype FALSE canonical NA NA 1400 None 28 3 0 FALSE 0 0 NA A coding 468 1404 24 1427 PB.10294.1 chr20 + 6184 1 antisense novelGene_RNA5SP477_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 43 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10429.8 chr20 + 2626 1 incomplete-splice_match NCOA3 ENST00000372004.7 7939 23 5302 12 no_subtype FALSE canonical NA NA NA None 22 25 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10885.1 chrX + 2608 9 full-splice_match SYAP1 ENST00000380155.3 6129 9 9 3512 no_subtype FALSE canonical NA NA 1015 None 2 7 0 FALSE 0 0 NA A coding 352 1056 85 1140 PB.10141.1 chr19 + 1913 3 novel_not_in_catalog FPR2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1810 None 5 7 2 TRUE 0 0 NA A coding 351 1053 68 1120 PB.4300.1 chr7 + 1781 9 novel_not_in_catalog TMEM106B novel NA NA NA NA no_subtype TRUE canonical NA NA 847 None 4 3 0 TRUE 0 0 NA A coding 274 822 162 983 PB.4300.2 chr7 - 3051 2 antisense novelGene_TMEM106B_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2816 None 5 28 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.655.1 chr1 + 1845 10 full-splice_match ECM1 ENST00000369047.8 2070 10 -5 230 no_subtype FALSE canonical NA NA 1522 None 15 0 0 FALSE 0 0 NA A coding 540 1620 131 1750 PB.2469.6 chr3 + 3622 5 novel_not_in_catalog ATP2C1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2583 None 2 25 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.5758.1 chr10 + 2440 11 novel_not_in_catalog RASSF4 novel NA NA NA NA no_subtype FALSE canonical NA NA 998 None 10 10 0 FALSE 0 0 NA B coding 321 963 94 1056 PB.5758.2 chr10 + 2957 11 novel_not_in_catalog RASSF4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1514 None 2 9 0 FALSE 0 0 NA B coding 302 906 113 1018 PB.2469.5 chr3 + 3384 28 novel_in_catalog ATP2C1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2855 None 5 3 0 FALSE 0 0 NA C coding 933 2799 150 2948 PB.3296.1 chr5 + 6296 25 full-splice_match ERBIN ENST00000380943.6 6410 25 106 8 no_subtype FALSE canonical NA NA 4210 None 6 13 0 FALSE 0 0 NA A coding 1371 4113 203 4315 PB.2469.3 chr3 + 3693 29 novel_in_catalog ATP2C1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3168 None 2 5 0 FALSE 0 0 NA C coding 939 2817 445 3261 PB.787.4 chr1 - 4135 33 full-splice_match COPA ENST00000241704.7 4789 33 135 519 no_subtype FALSE canonical NA NA 135 None 104 4 0 FALSE 0 0 NA C coding 1224 3672 96 3767 PB.7497.1 chr13 + 1938 2 full-splice_match TRIM13 ENST00000378182.3 7249 2 27 5284 no_subtype FALSE canonical NA NA 705 None 2 8 0 FALSE 0 0 NA C coding 407 1221 712 1932 PB.8491.5 chr16 + 2640 2 novel_not_in_catalog EEF2K novel NA NA NA NA no_subtype FALSE canonical NA NA 313 None 2 21 1 TRUE 0 0 NA B coding 137 411 270 680 PB.7782.2 chr14 - 2690 9 novel_not_in_catalog DCAF5 novel NA NA NA NA no_subtype FALSE canonical NA NA 60 None 8 1 1 FALSE 0 0 NA B coding 616 1848 829 2676 PB.5269.3 chr9 - 2600 3 novel_not_in_catalog SIGMAR1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 232 None 2 5 0 TRUE 0 0 NA C coding 120 360 81 440 PB.8491.6 chr16 + 2077 1 incomplete-splice_match EEF2K ENST00000263026.9 7388 18 3207 2105 no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8491.1 chr16 + 2659 19 novel_not_in_catalog EEF2K novel NA NA NA NA no_subtype FALSE canonical NA NA 2497 None 28 6 0 TRUE 0 0 NA B coding 725 2175 430 2604 PB.2892.2 chr4 + 3249 9 full-splice_match SEPT11 ENST00000502584.5 2615 9 5 -639 no_subtype FALSE canonical NA NA 1234 None 5 17 0 FALSE 0 0 NA C coding 425 1275 149 1423 PB.5578.2 chr9 - 1721 2 full-splice_match FAM78A ENST00000372271.3 3966 2 38 2207 no_subtype FALSE canonical NA NA 653 None 7 4 0 FALSE 0 0 NA C coding 283 849 331 1179 PB.8491.2 chr16 + 3253 13 novel_in_catalog EEF2K novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1851 None 2 9 0 FALSE 0 0 NA B coding 518 1554 475 2028 PB.7969.1 chr15 - 1649 1 full-splice_match NSMCE3 ENST00000332303.5 4838 1 20 3169 no_subtype FALSE canonical NA NA NA None 12 12 0 FALSE 0 0 NA A coding 304 912 105 1016 PB.7210.5 chr12 + 3205 28 novel_in_catalog KIAA1033 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 3174 None 2 4 2 FALSE 0 0 NA C coding 513 1539 1427 2965 PB.7210.4 chr12 + 3456 32 incomplete-splice_match KIAA1033 ENST00000332180.9 5812 33 63 2293 3prime_fragment FALSE canonical NA NA 3378 None 11 2 0 FALSE 0 0 NA C coding 1144 3432 25 3456 PB.7210.3 chr12 + 3105 29 novel_not_in_catalog KIAA1033 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3073 None 2 5 1 TRUE 0 0 NA C coding 922 2766 73 2838 PB.7210.2 chr12 + 5739 33 full-splice_match KIAA1033 ENST00000332180.9 5812 33 63 10 no_subtype FALSE canonical NA NA 3478 None 14 19 0 FALSE 0 0 NA C coding 1173 3519 25 3543 PB.7210.1 chr12 + 3123 30 incomplete-splice_match KIAA1033 ENST00000332180.9 5812 33 57 2632 3prime_fragment FALSE canonical NA NA 3090 None 29 0 0 FALSE 0 0 NA C coding 1031 3093 31 3123 PB.7401.2 chr13 + 3001 12 full-splice_match CDK8 ENST00000536792.5 3032 12 26 5 no_subtype FALSE canonical NA NA 1723 None 2 4 0 FALSE 0 0 NA C coding 206 618 1229 1846 PB.7401.1 chr13 + 3051 13 full-splice_match CDK8 ENST00000381527.7 3055 13 -9 13 no_subtype FALSE canonical NA NA 1781 None 7 2 0 FALSE 0 0 NA C coding 464 1392 513 1904 PB.7350.1 chr12 - 2725 1 incomplete-splice_match PITPNM2 ENST00000542749.5 6660 24 3935 1 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A coding 107 321 406 726 PB.8330.1 chr15 - 5586 3 genic RP11-505E24.3 novel NA NA NA NA no_subtype TRUE canonical NA NA 2377 None 7 23 0 TRUE 0 0 NA A coding 172 516 2546 3061 PB.1714.1 chr2 + 1636 3 fusion HOXD10,HOXD11 novel NA NA NA NA no_subtype FALSE canonical NA NA 658 None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1714.2 chr2 + 3050 2 full-splice_match HOXD11 ENST00000498438.1 1259 2 293 -2084 no_subtype FALSE canonical NA NA 118 None 5 18 0 FALSE 0 0 NA A coding 37 111 241 351 PB.1714.3 chr2 + 1560 2 full-splice_match HOXD10 ENST00000490088.2 1010 2 -13 -537 no_subtype FALSE canonical NA NA 582 None 2 5 0 FALSE 0 0 NA A coding 37 111 253 363 PB.9610.1 chr18 - 1439 3 novel_not_in_catalog RP11-162A12.2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1236 None 2 9 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.724.2 chr1 + 1345 10 novel_in_catalog FDPS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1099 None 2 1 0 FALSE 0 0 NA B coding 419 1257 41 1297 PB.5275.2 chr9 - 2518 13 novel_in_catalog FANCG novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 590 None 2 3 0 FALSE 0 0 NA C coding 551 1653 507 2159 PB.5275.3 chr9 - 2638 14 full-splice_match FANCG ENST00000378643.7 2631 14 -16 9 no_subtype FALSE canonical NA NA 592 None 8 3 0 FALSE 0 0 NA C coding 622 1866 509 2374 PB.5275.1 chr9 - 3113 10 novel_not_in_catalog FANCG novel NA NA NA NA no_subtype FALSE canonical NA NA 572 None 2 15 1 TRUE 0 0 NA C coding 230 690 489 1178 PB.4249.1 chr6 - 5462 23 novel_not_in_catalog RPS6KA2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 110 None 3 16 0 TRUE 0 0 NA B coding 731 2193 69 2261 PB.4249.2 chr6 - 3791 22 novel_not_in_catalog RPS6KA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 111 None 3 8 0 FALSE 0 0 NA B coding 727 2181 82 2262 PB.835.1 chr1 - 2083 8 full-splice_match TADA1 ENST00000367874.4 2159 8 68 8 no_subtype FALSE canonical NA NA 100 None 2 5 0 FALSE 0 0 NA A coding 335 1005 27 1031 PB.10974.1 chrX - 1744 1 full-splice_match VDAC1P2 ENST00000423609.1 850 1 -33 -861 no_subtype FALSE canonical NA NA NA None 10 3 0 FALSE 0 0 NA A coding 129 387 494 880 PB.1787.1 chr2 - 2967 2 antisense novelGene_SEPHS1P6_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1667 None 15 22 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8320.2 chr15 + 4134 1 incomplete-splice_match SYNM ENST00000336292.10 7394 4 3247 14 no_subtype FALSE canonical NA NA NA None 5 22 0 FALSE 0 0 NA B coding 426 1278 336 1613 PB.893.2 chr1 - 3353 4 novel_not_in_catalog TOR1AIP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 111 None 17 14 0 TRUE 0 0 NA B coding 131 393 925 1317 PB.8320.1 chr15 + 3066 2 incomplete-splice_match SYNM ENST00000560674.5 5908 5 2172 670 internal_fragment FALSE canonical NA NA 892 None 2 13 0 FALSE 0 0 NA B coding 317 951 248 1198 PB.3709.1 chr6 - 790 5 novel_not_in_catalog GMDS novel NA NA NA NA no_subtype FALSE canonical NA NA 81 None 2 5 0 FALSE 0 0 NA B coding 114 342 85 426 PB.3709.2 chr6 - 1505 14 novel_not_in_catalog GMDS novel NA NA NA NA no_subtype TRUE canonical NA NA 130 None 13 6 0 TRUE 0 0 NA B coding 372 1116 29 1144 PB.2539.3 chr3 - 2977 2 antisense novelGene_MBNL1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 20 None 61 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9511.3 chr18 + 2156 20 full-splice_match C18orf8 ENST00000269221.7 2162 20 7 -1 no_subtype FALSE non_canonical NA NA 1997 None 7 1 0 FALSE 0 0 NA A coding 657 1971 104 2074 PB.436.1 chr1 - 1894 9 novel_not_in_catalog CRYZ novel NA NA NA NA no_subtype FALSE canonical NA NA 98 None 11 7 0 FALSE 0 0 NA A coding 329 987 105 1091 PB.9511.1 chr18 + 3375 14 novel_not_in_catalog RIOK3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2656 None 122 8 1 TRUE 0 0 NA A coding 519 1557 141 1697 PB.1792.1 chr2 + 2878 12 full-splice_match BZW1 ENST00000409600.5 6875 12 390 3607 no_subtype FALSE canonical NA NA 1293 None 580 5 0 FALSE 0 0 NA A coding 419 1257 66 1322 PB.2654.16 chr3 + 1942 1 incomplete-splice_match EIF4A2 ENST00000485101.5 5327 4 3383 3 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5570.1 chr9 + 1569 16 novel_not_in_catalog ASS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1292 None 25 2 0 FALSE 0 0 NA C coding 412 1236 100 1335 PB.5570.2 chr9 + 1492 15 full-splice_match ASS1 ENST00000352480.9 1564 15 32 40 no_subtype FALSE canonical NA NA 1233 None 2 2 0 FALSE 0 0 NA C coding 412 1236 41 1276 PB.9606.1 chr18 - 3356 2 full-splice_match ZADH2 ENST00000322342.3 7732 2 169 4207 no_subtype FALSE canonical NA NA 330 None 53 11 0 FALSE 0 0 NA C coding 377 1131 122 1252 PB.9606.2 chr18 - 3128 2 full-splice_match ZADH2 ENST00000582437.1 671 2 -51 -2406 no_subtype FALSE canonical NA NA 98 None 3 10 0 FALSE 0 0 NA C coding 254 762 259 1020 PB.9970.3 chr19 - 3121 17 novel_not_in_catalog RASGRP4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 146 None 14 11 1 FALSE 0 0 NA A coding 538 1614 527 2140 PB.8598.1 chr16 - 5724 4 genic_intron novelGene_480 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 124 None 2 47 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6294.1 chr11 + 2769 4 novel_not_in_catalog SLC35C1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1151 None 20 5 1 TRUE 0 0 NA B coding 351 1053 58 1110 PB.6294.2 chr11 + 3383 3 novel_not_in_catalog SLC35C1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1765 None 5 11 1 TRUE 0 0 NA B coding 364 1092 633 1724 PB.1386.2 chr2 - 3596 2 genic_intron novelGene_616 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3429 None 6 19 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1343.8 chr2 - 3865 18 novel_not_in_catalog PPP4R3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 35 None 2 4 0 TRUE 0 0 NA B coding 849 2547 142 2688 PB.1343.9 chr2 - 3777 17 novel_not_in_catalog PPP4R3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 53 None 6 4 0 TRUE 0 0 NA B coding 817 2451 155 2605 PB.1794.7 chr2 - 3184 12 novel_not_in_catalog CLK1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 22 None 4 9 0 TRUE 0 0 NA C coding 333 999 1970 2968 PB.5345.10 chr9 - 2603 16 novel_in_catalog HNRNPK novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 121 None 4 8 0 FALSE 0 0 NA C coding 439 1317 229 1545 PB.5783.1 chr10 + 3776 2 genic_intron novelGene_511 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1165 None 2 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4411.17 chr7 - 5665 11 novel_not_in_catalog MYO1G novel NA NA NA NA no_subtype FALSE canonical NA NA 25 None 2 23 1 TRUE 0 0 NA C coding 416 1248 3696 4943 PB.4411.16 chr7 - 5763 10 full-splice_match MYO1G ENST00000480503.5 5672 10 -93 2 no_subtype FALSE canonical NA NA 227 None 7 24 0 FALSE 0 0 NA C coding 416 1248 3795 5042 PB.4411.19 chr7 + 1815 10 full-splice_match CCM2 ENST00000258781.10 1894 10 75 4 no_subtype FALSE canonical NA NA 1128 None 2 3 0 FALSE 0 0 NA C coding 444 1332 75 1406 PB.4411.18 chr7 - 2724 12 novel_not_in_catalog MYO1G novel NA NA NA NA no_subtype FALSE canonical NA NA 34 None 5 11 1 TRUE 0 0 NA C coding 654 1962 43 2004 PB.1343.2 chr2 - 4215 18 novel_not_in_catalog PPP4R3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 34 None 2 8 0 TRUE 0 0 NA B coding 849 2547 135 2681 PB.1343.4 chr2 - 4127 17 novel_not_in_catalog PPP4R3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 37 None 2 18 1 TRUE 0 0 NA B coding 817 2451 143 2593 PB.4581.1 chr7 - 1907 14 full-splice_match ORC5 ENST00000297431.8 1958 14 40 11 no_subtype FALSE canonical NA NA 175 None 8 3 0 FALSE 0 0 NA C coding 435 1305 104 1408 PB.1615.6 chr2 + 1621 1 genic_intron novelGene_1207 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9114.1 chr17 + 3125 2 antisense novelGene_RP5-1028K7.3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 929 None 4 14 1 FALSE 0 0 NA A coding 174 522 291 812 PB.5546.1 chr9 - 1629 9 full-splice_match WDR34 ENST00000372715.6 1755 9 102 24 no_subtype FALSE canonical NA NA 145 None 5 2 0 FALSE 0 0 NA A coding 419 1257 311 1567 PB.1921.1 chr2 + 3446 26 novel_not_in_catalog GIGYF2 novel NA NA NA NA no_subtype TRUE canonical NA NA 3274 None 2 3 0 TRUE 0 0 NA B coding 1090 3270 176 3445 PB.3715.2 chr6 + 1501 7 full-splice_match BPHL ENST00000380379.9 1928 7 36 391 no_subtype FALSE canonical NA NA 801 None 12 5 0 FALSE 0 0 NA C coding 291 873 14 886 PB.3715.1 chr6 + 1372 6 novel_in_catalog BPHL novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 671 None 2 6 0 FALSE 0 0 NA C coding 247 741 16 756 PB.7630.4 chr14 + 1809 13 novel_not_in_catalog IRF9 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1751 None 10 4 1 TRUE 0 0 NA C coding 393 1179 43 1221 PB.7260.1 chr12 - 5618 2 novel_not_in_catalog ATXN2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1146 None 2 39 0 TRUE 0 0 NA A coding 140 420 1465 1884 PB.7630.7 chr14 + 2720 12 novel_not_in_catalog IRF9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2636 None 2 10 1 TRUE 0 0 NA C coding 422 1266 37 1302 PB.10726.1 chr22 + 1558 5 full-splice_match HMOX1 ENST00000216117.8 1822 5 257 7 no_subtype FALSE canonical NA NA 818 None 59 3 0 FALSE 0 0 NA A coding 288 864 83 946 PB.5525.1 chr9 + 2917 1 antisense novelGene_SH2D3C_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A coding 143 429 194 622 PB.370.1 chr1 - 3091 18 novel_not_in_catalog ORC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 161 None 12 7 0 FALSE 0 0 NA A coding 859 2577 167 2743 PB.2880.7 chr4 - 1969 4 novel_in_catalog G3BP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 207 None 3 10 0 FALSE 0 0 NA C coding 156 468 232 699 PB.2880.6 chr4 - 4158 11 novel_in_catalog G3BP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 146 None 3 5 0 FALSE 0 0 NA C coding 449 1347 171 1517 PB.2880.1 chr4 - 2758 1 incomplete-splice_match G3BP2 ENST00000395719.7 4217 12 1454 6 no_subtype FALSE canonical NA NA NA None 6 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2880.3 chr4 - 2521 11 full-splice_match G3BP2 ENST00000357854.7 2609 11 -12 100 no_subtype FALSE canonical NA NA 206 None 96 2 0 FALSE 0 0 NA C coding 449 1347 231 1577 PB.2880.2 chr4 - 2723 12 full-splice_match G3BP2 ENST00000359707.8 4883 12 556 1604 no_subtype FALSE canonical NA NA 206 None 9 3 0 FALSE 0 0 NA C coding 482 1446 231 1676 PB.63.1 chr1 + 3666 10 full-splice_match TNFRSF1B ENST00000376259.6 3683 10 11 6 no_subtype FALSE canonical NA NA 1183 None 69 23 0 FALSE 0 0 NA C coding 461 1383 79 1461 PB.63.2 chr1 + 1843 7 incomplete-splice_match TNFRSF1B ENST00000492361.1 3583 9 411 1329 internal_fragment FALSE canonical NA NA 683 None 3 7 0 FALSE 0 0 NA C coding 266 798 164 961 PB.63.4 chr1 + 1162 2 incomplete-splice_match TNFRSF1B ENST00000492361.1 3583 9 937 1484 internal_fragment FALSE canonical NA NA 157 None 5 20 0 FALSE 0 0 NA C coding 57 171 265 435 PB.9978.1 chr19 - 1872 16 full-splice_match SARS2 ENST00000221431.10 2057 16 134 51 no_subtype FALSE canonical NA NA 293 None 9 1 0 FALSE 0 0 NA A coding 518 1554 27 1580 PB.7272.3 chr12 + 3388 1 novel_in_catalog OAS1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7272.2 chr12 + 1547 2 full-splice_match OAS1 ENST00000553185.1 664 2 -65 -818 no_subtype FALSE canonical NA NA 247 None 2 3 0 FALSE 0 0 NA C coding 177 531 68 598 PB.7272.1 chr12 + 1611 6 full-splice_match OAS1 ENST00000202917.9 1816 6 203 2 no_subtype FALSE canonical NA NA 1098 None 135 1 0 FALSE 0 0 NA C coding 400 1200 61 1260 PB.2890.9 chr4 - 2602 6 novel_not_in_catalog SCARB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 436 None 2 16 0 TRUE 0 0 NA C coding 175 525 320 844 PB.2890.6 chr4 - 3352 12 full-splice_match SCARB2 ENST00000264896.6 4763 12 108 1303 no_subtype FALSE canonical NA NA 359 None 3 15 1 FALSE 0 0 NA C coding 478 1434 243 1676 PB.2890.7 chr4 - 1959 13 novel_not_in_catalog SCARB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 390 None 3 5 1 TRUE 0 0 NA C coding 320 960 743 1702 PB.2890.4 chr4 - 2996 13 novel_not_in_catalog SCARB2 novel NA NA NA NA no_subtype TRUE canonical NA NA 160 None 4 7 0 TRUE 0 0 NA C coding 320 960 360 1319 PB.2890.5 chr4 - 1973 14 novel_not_in_catalog SCARB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 399 None 46 4 0 TRUE 0 0 NA C coding 478 1434 283 1716 PB.2890.2 chr4 - 1831 2 novel_not_in_catalog SCARB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 275 None 2 15 1 TRUE 0 0 NA C coding 108 324 841 1164 PB.2890.1 chr4 + 1801 2 antisense novelGene_SCARB2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1564 None 2 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5140.1 chr8 + 1874 3 full-splice_match CHRAC1 ENST00000220913.9 2488 3 168 446 no_subtype FALSE canonical NA NA 308 None 5 13 0 FALSE 0 0 NA A coding 131 393 35 427 PB.696.3 chr1 - 2663 14 novel_not_in_catalog CRTC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 290 None 4 6 1 TRUE 0 0 NA C coding 425 1275 949 2223 PB.4997.1 chr8 - 3107 3 novel_not_in_catalog C8orf59 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1115 None 3 21 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.4424.3 chr7 + 3031 12 novel_in_catalog CCT6A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1383 None 2 22 0 FALSE 0 0 NA C coding 490 1470 37 1506 PB.10455.1 chr20 + 1690 6 full-splice_match CSTF1 ENST00000217109.8 4290 6 272 2328 no_subtype FALSE canonical NA NA 1116 None 7 4 0 FALSE 0 0 NA A coding 431 1293 81 1373 PB.10843.1 chr22 - 2572 14 full-splice_match LMF2 ENST00000474879.6 2582 14 1 9 no_subtype FALSE canonical NA NA 109 None 38 13 0 FALSE 0 0 NA C coding 707 2121 16 2136 PB.673.2 chr1 + 3589 1 genic TNFAIP8L2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 8 0 FALSE 0 0 NA C coding 228 684 1918 2601 PB.673.1 chr1 + 1643 2 full-splice_match TNFAIP8L2 ENST00000368910.3 1178 2 20 -485 no_subtype FALSE canonical NA NA 74 None 6 1 0 FALSE 0 0 NA C coding 184 552 107 658 PB.10852.4 chrX + 1842 10 novel_not_in_catalog CD99 novel NA NA NA NA no_subtype FALSE canonical NA NA 1544 None 2 13 1 TRUE 0 0 NA C coding 160 480 75 554 PB.3775.1 chr6 + 4326 7 novel_in_catalog E2F3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 786 None 4 16 0 FALSE 0 0 NA A coding 340 1020 27 1046 PB.5879.1 chr10 + 2482 8 novel_in_catalog TSPAN14 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 763 None 108 12 0 FALSE 0 0 NA B coding 270 810 23 832 PB.3775.3 chr6 + 6052 5 genic E2F3-IT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5513 None 2 38 3 TRUE 0 0 NA A non_coding NA NA NA NA PB.5879.3 chr10 + 2639 8 novel_not_in_catalog TSPAN14 novel NA NA NA NA no_subtype FALSE canonical NA NA 918 None 2 14 0 FALSE 0 0 NA B coding 215 645 343 987 PB.10435.1 chr20 - 3354 1 incomplete-splice_match B4GALT5 ENST00000371711.4 4722 9 1362 7 no_subtype FALSE canonical NA NA NA None 5 21 0 FALSE 0 0 NA A coding 128 384 792 1175 PB.5879.5 chr10 + 1442 1 incomplete-splice_match TSPAN14 ENST00000616406.1 2436 7 991 4 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5345.13 chr9 - 2007 17 full-splice_match HNRNPK ENST00000360384.9 2038 17 29 2 no_subtype FALSE canonical NA NA 69 None 6 4 0 FALSE 0 0 NA C coding 463 1389 177 1565 PB.2177.4 chr3 - 1694 2 full-splice_match IP6K2 ENST00000417896.1 1124 2 -2 -568 no_subtype FALSE canonical NA NA 52 None 2 7 0 FALSE 0 0 NA C coding 130 390 180 569 PB.2177.5 chr3 - 1481 1 novel_in_catalog IP6K2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7417.2 chr13 + 3003 9 novel_not_in_catalog USPL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1608 None 2 4 0 TRUE 0 0 NA C coding 349 1047 582 1628 PB.7417.3 chr13 + 3646 9 full-splice_match USPL1 ENST00000255304.8 3814 9 168 0 no_subtype FALSE canonical NA NA 1570 None 2 4 0 FALSE 0 0 NA C coding 1091 3273 178 3450 PB.9158.1 chr17 + 2912 8 novel_not_in_catalog CD300LG novel NA NA NA NA no_subtype FALSE canonical NA NA 1079 None 2 14 0 FALSE 0 0 NA B coding 372 1116 75 1190 PB.7417.1 chr13 + 3500 8 novel_in_catalog USPL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1426 None 12 3 0 FALSE 0 0 NA C coding 911 2733 574 3306 PB.5485.1 chr9 + 2711 10 novel_in_catalog PTGS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1599 None 7 1 0 FALSE 0 0 NA C coding 490 1470 483 1952 PB.1396.2 chr2 + 2860 2 genic_intron novelGene_658 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2755 None 2 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8407.1 chr16 - 2104 7 full-splice_match TFAP4 ENST00000204517.10 2215 7 108 3 no_subtype FALSE canonical NA NA 310 None 5 7 0 FALSE 0 0 NA A coding 338 1014 222 1235 PB.4999.1 chr8 + 1549 7 full-splice_match CA2 ENST00000285379.9 1717 7 157 11 no_subtype FALSE canonical NA NA 736 None 293 2 0 FALSE 0 0 NA C coding 260 780 74 853 PB.10852.5 chrX + 2709 10 novel_not_in_catalog CD99 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 484 None 2 37 3 TRUE 0 0 NA C coding 179 537 18 554 PB.2735.1 chr4 + 3246 2 genic_intron novelGene_48 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 35 None 2 37 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4999.2 chr8 + 1551 7 novel_not_in_catalog CA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 719 None 2 2 1 FALSE 0 0 NA C coding 21 63 774 836 PB.9923.1 chr19 + 3394 10 full-splice_match LSM14A ENST00000544216.7 3596 10 -41 243 no_subtype FALSE canonical NA NA 1486 None 63 7 0 FALSE 0 0 NA C coding 463 1389 119 1507 PB.9923.2 chr19 + 3466 11 full-splice_match LSM14A ENST00000433627.9 3424 11 -52 10 no_subtype FALSE canonical NA NA 1552 None 14 9 0 FALSE 0 0 NA C coding 463 1389 128 1516 PB.9923.3 chr19 + 3253 9 novel_in_catalog LSM14A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1339 None 2 10 1 FALSE 0 0 NA C coding 404 1212 149 1360 PB.8076.1 chr15 + 3403 2 novel_not_in_catalog FGF7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2756 None 4 15 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.2070.1 chr3 - 2960 1 genic_intron novelGene_294 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6564.1 chr11 - 2840 2 genic_intron novelGene_748 novel NA NA NA NA no_subtype FALSE canonical NA NA 442 None 4 9 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7244.1 chr12 + 3999 20 novel_not_in_catalog ATP2A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2885 None 2 16 1 FALSE 0 0 NA B coding 507 1521 1632 3152 PB.6558.1 chr11 - 1557 5 novel_not_in_catalog NDUFC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 299 None 3 8 2 TRUE 0 0 NA A coding 119 357 134 490 PB.7860.1 chr14 + 2634 16 novel_not_in_catalog C14orf159 novel NA NA NA NA no_subtype FALSE canonical NA NA 1971 None 4 4 0 TRUE 0 0 NA B coding 590 1770 345 2114 PB.10802.10 chr22 - 1203 7 full-splice_match RRP7A ENST00000323013.6 3801 7 6 2592 no_subtype FALSE canonical NA NA 83 None 2 5 0 FALSE 0 0 NA C coding 280 840 11 850 PB.7860.3 chr14 + 2712 16 novel_not_in_catalog C14orf159 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2056 None 2 4 1 TRUE 0 0 NA B coding 545 1635 344 1978 PB.3558.7 chr5 - 5911 1 novel_in_catalog NR3C1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 34 0 FALSE 0 0 NA C coding 395 1185 2253 3437 PB.8301.1 chr15 + 3247 21 novel_not_in_catalog UNC45A novel NA NA NA NA no_subtype FALSE canonical NA NA 2614 None 43 2 0 TRUE 0 0 NA B coding 944 2832 38 2869 PB.4386.1 chr7 - 3573 3 antisense novelGene_RALA_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1210 None 2 20 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.665.3 chr1 - 4310 22 novel_not_in_catalog ARNT novel NA NA NA NA no_subtype FALSE canonical NA NA 91 None 4 11 1 TRUE 0 0 NA C coding 436 1308 1085 2392 PB.8417.2 chr16 - 1366 3 full-splice_match UBALD1 ENST00000283474.11 1413 3 38 9 no_subtype FALSE canonical NA NA 211 None 9 4 0 FALSE 0 0 NA A coding 177 531 92 622 PB.1529.1 chr2 + 4127 4 full-splice_match C2orf49 ENST00000258457.6 4768 4 195 446 no_subtype FALSE canonical NA NA 676 None 4 22 0 FALSE 0 0 NA A coding 232 696 35 730 PB.7246.1 chr12 + 3539 2 novel_not_in_catalog ATP2A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1163 None 2 23 1 TRUE 0 0 NA B coding 112 336 1762 2097 PB.6223.1 chr11 + 1833 1 genic_intron novelGene_154 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5684.1 chr10 - 1579 9 full-splice_match PHYH ENST00000263038.8 1577 9 -6 4 no_subtype FALSE canonical NA NA 140 None 11 8 0 FALSE 0 0 NA A coding 353 1059 21 1079 PB.2461.4 chr3 - 1321 3 full-splice_match RAB43 ENST00000315150.9 4467 3 223 2923 no_subtype FALSE canonical NA NA 282 None 3 2 0 FALSE 0 0 NA C coding 212 636 79 714 PB.7651.2 chr14 + 2979 13 novel_not_in_catalog NUBPL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1686 None 3 10 1 TRUE 0 0 NA B coding 319 957 4 960 PB.7651.1 chr14 + 3005 13 novel_not_in_catalog NUBPL novel NA NA NA NA no_subtype TRUE canonical NA NA 1706 None 7 9 1 TRUE 0 0 NA B coding 319 957 28 984 PB.3612.1 chr5 - 2642 3 novel_not_in_catalog MED7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 63 None 7 15 1 TRUE 0 0 NA A coding 233 699 81 779 PB.734.1 chr1 - 2851 14 novel_in_catalog KIAA0907 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 70 None 2 4 0 FALSE 0 0 NA C coding 384 1152 33 1184 PB.734.2 chr1 - 2950 14 full-splice_match KIAA0907 ENST00000368321.7 2947 14 -9 6 no_subtype FALSE canonical NA NA 71 None 48 3 0 FALSE 0 0 NA C coding 614 1842 34 1875 PB.734.3 chr1 - 2922 14 novel_in_catalog KIAA0907 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 71 None 6 23 1 FALSE 0 0 NA C coding 510 1530 34 1563 PB.7754.2 chr14 + 2932 27 novel_in_catalog MTHFD1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2697 None 2 4 0 FALSE 0 0 NA C coding 877 2631 60 2690 PB.5497.1 chr9 + 6444 4 genic NEK6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4990 None 3 56 3 TRUE 0 0 NA C coding 183 549 2038 2586 PB.1907.16 chr2 + 5305 28 novel_not_in_catalog SP100 novel NA NA NA NA no_subtype FALSE canonical NA NA 2541 None 2 22 0 FALSE 0 0 NA B coding 858 2574 76 2649 PB.7754.1 chr14 + 3107 28 full-splice_match MTHFD1 ENST00000216605.12 3136 28 19 10 no_subtype TRUE canonical NA NA 2871 None 80 3 0 FALSE 0 0 NA C coding 935 2805 60 2864 PB.1907.10 chr2 + 1637 14 novel_not_in_catalog SP100 novel NA NA NA NA no_subtype FALSE canonical NA NA 1282 None 90 3 0 FALSE 0 0 NA B coding 453 1359 19 1377 PB.1907.11 chr2 + 1540 16 novel_not_in_catalog SP100 novel NA NA NA NA no_subtype FALSE canonical NA NA 1496 None 65 1 0 FALSE 0 0 NA B coding 483 1449 92 1540 PB.1689.1 chr2 - 1522 1 incomplete-splice_match TLK1 ENST00000359766.7 4321 23 2785 15 no_subtype FALSE canonical NA NA NA None 4 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10060.3 chr19 + 2662 12 novel_not_in_catalog VASP novel NA NA NA NA no_subtype TRUE canonical NA NA 1817 None 2 11 0 FALSE 0 0 NA C coding 318 954 289 1242 PB.10060.2 chr19 + 1664 10 novel_in_catalog VASP novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 818 None 2 6 0 FALSE 0 0 NA C coding 165 495 359 853 PB.10060.1 chr19 + 2217 13 full-splice_match VASP ENST00000245932.10 2305 13 82 6 no_subtype FALSE canonical NA NA 1379 None 36 20 1 FALSE 0 0 NA C coding 380 1140 275 1414 PB.2502.2 chr3 + 3024 24 novel_in_catalog RASA2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2532 None 37 1 0 FALSE 0 0 NA B coding 850 2550 11 2560 PB.4140.2 chr6 - 2430 12 full-splice_match SGK1 ENST00000528577.5 1850 12 44 -624 no_subtype FALSE canonical NA NA 199 None 3 4 0 FALSE 0 0 NA C coding 459 1377 40 1416 PB.10060.4 chr19 + 2068 14 novel_not_in_catalog VASP novel NA NA NA NA no_subtype FALSE canonical NA NA 1223 None 2 7 1 FALSE 0 0 NA C coding 328 984 275 1258 PB.6431.1 chr11 + 1608 2 full-splice_match CDC42EP2 ENST00000279249.2 2023 2 76 339 no_subtype FALSE canonical NA NA 61 None 16 6 0 FALSE 0 0 NA A coding 210 630 417 1046 PB.8784.1 chr16 + 4351 14 incomplete-splice_match CRISPLD2 ENST00000262424.9 4586 15 234 1 internal_fragment FALSE canonical NA NA 1429 None 2 21 0 FALSE 0 0 NA B coding 437 1311 171 1481 PB.2670.1 chr3 + 2856 1 intergenic novelGene_1359 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 20 0 FALSE 0 0 NA A coding 103 309 357 665 PB.2905.12 chr4 - 5686 1 novel_in_catalog ANTXR2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 28 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1189.1 chr2 - 2594 21 full-splice_match NOL10 ENST00000381685.9 2589 21 -9 4 no_subtype FALSE canonical NA NA 181 None 6 8 0 FALSE 0 0 NA A coding 688 2064 116 2179 PB.6790.1 chr12 + 3064 20 full-splice_match USP5 ENST00000389231.9 3083 20 24 -5 no_subtype FALSE canonical NA NA 2422 None 143 5 0 FALSE 0 0 NA C coding 835 2505 9 2513 PB.6790.3 chr12 + 3143 20 full-splice_match USP5 ENST00000229268.12 3181 20 34 4 no_subtype FALSE canonical NA NA 2501 None 6 5 0 FALSE 0 0 NA C coding 858 2574 19 2592 PB.6790.4 chr12 + 3114 20 novel_not_in_catalog USP5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2472 None 2 7 0 FALSE 0 0 NA C coding 594 1782 22 1803 PB.11154.1 chrX - 3568 15 full-splice_match ENOX2 ENST00000394363.5 4174 15 87 519 no_subtype FALSE canonical NA NA 182 None 8 1 0 FALSE 0 0 NA C coding 577 1731 425 2155 PB.7726.1 chr14 + 5875 9 novel_not_in_catalog PELI2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5166 None 3 35 3 TRUE 0 0 NA A coding 420 1260 312 1571 PB.7726.2 chr14 + 1487 1 genic_intron novelGene_549 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2554.1 chr3 - 1046 6 full-splice_match LXN ENST00000264265.3 1116 6 60 10 no_subtype FALSE canonical NA NA 284 None 4 5 0 FALSE 0 0 NA A coding 222 666 156 821 PB.2461.2 chr3 - 4263 4 novel_not_in_catalog RAB43 novel NA NA NA NA no_subtype FALSE canonical NA NA 333 None 11 27 0 TRUE 0 0 NA C coding 212 636 130 765 PB.2578.1 chr3 - 1476 5 full-splice_match EIF5A2 ENST00000295822.6 5593 5 74 4043 no_subtype FALSE canonical NA NA 77 None 2 4 0 FALSE 0 0 NA A coding 153 459 113 571 PB.3366.1 chr5 - 3445 1 genic_intron novelGene_791 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11184.5 chrX - 1906 6 novel_in_catalog IDS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 270 None 2 10 0 FALSE 0 0 NA C coding 297 891 168 1058 PB.6633.2 chr11 + 2947 1 incomplete-splice_match ATM ENST00000452508.6 12954 64 10003 5 no_subtype FALSE canonical NA NA NA None 3 30 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.11184.3 chrX - 2373 9 full-splice_match IDS ENST00000340855.10 7619 9 7 5239 no_subtype TRUE canonical NA NA 306 None 58 7 0 FALSE 0 0 NA C coding 550 1650 204 1853 PB.8465.1 chr16 - 3277 4 novel_not_in_catalog XYLT1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 61 None 3 16 1 TRUE 0 0 NA B coding 122 366 2353 2718 PB.8465.2 chr16 - 1539 2 genic_intron novelGene_157 novel NA NA NA NA no_subtype FALSE canonical NA NA 535 None 2 9 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3813.15 chr6 - 3809 26 novel_in_catalog BAG6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 261 None 5 5 0 FALSE 0 0 NA C coding 1162 3486 275 3760 PB.7025.1 chr12 + 1399 7 full-splice_match CDK2 ENST00000266970.8 2296 7 3 894 no_subtype FALSE canonical NA NA 1029 None 3 0 0 FALSE 0 0 NA A coding 298 894 238 1131 PB.2528.2 chr3 - 2697 2 novel_not_in_catalog PFN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1405 None 2 18 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.3813.16 chr6 - 3569 24 full-splice_match BAG6 ENST00000362049.10 3626 24 40 17 no_subtype FALSE canonical NA NA 237 None 20 2 0 FALSE 0 0 NA C coding 1077 3231 251 3481 PB.2490.1 chr3 + 1720 4 full-splice_match NCK1 ENST00000481752.5 1971 4 46 205 no_subtype FALSE canonical NA NA 1057 None 7 4 0 FALSE 0 0 NA C coding 377 1131 119 1249 PB.6786.4 chr12 - 2648 9 novel_in_catalog ZNF384 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 111 None 2 9 0 FALSE 0 0 NA B coding 500 1500 177 1676 PB.6786.5 chr12 - 2804 9 novel_in_catalog ZNF384 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 267 None 2 12 0 FALSE 0 0 NA B coding 500 1500 333 1832 PB.8383.1 chr16 - 1746 7 full-splice_match RNPS1 ENST00000566458.5 2037 7 283 8 no_subtype FALSE canonical NA NA 60 None 38 5 0 FALSE 0 0 NA C coding 282 846 59 904 PB.10980.3 chrX + 3057 3 novel_not_in_catalog FAM156B novel NA NA NA NA no_subtype FALSE canonical NA NA 1610 None 3 8 0 FALSE 0 0 NA B coding 213 639 1728 2366 PB.6786.1 chr12 - 2815 11 novel_not_in_catalog ZNF384 novel NA NA NA NA no_subtype FALSE canonical NA NA 219 None 4 8 0 TRUE 0 0 NA B coding 516 1548 285 1832 PB.8383.4 chr16 - 2796 7 novel_in_catalog RNPS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 40 None 2 7 0 FALSE 0 0 NA C coding 128 384 1577 1960 PB.9416.1 chr17 + 2788 4 full-splice_match C1QTNF1 ENST00000579760.5 1672 4 192 -1308 no_subtype FALSE canonical NA NA 542 None 17 10 0 FALSE 0 0 NA C coding 281 843 248 1090 PB.3813.10 chr6 - 3606 25 novel_not_in_catalog BAG6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 256 None 3 12 3 TRUE 0 0 NA C coding 1112 3336 270 3605 PB.4585.5 chr7 + 1898 13 novel_in_catalog KMT2E novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1791 None 57 1 0 FALSE 0 0 NA B coding 470 1410 488 1897 PB.8202.2 chr15 - 1470 11 novel_not_in_catalog UBL7 novel NA NA NA NA no_subtype FALSE canonical NA NA 22 None 2 4 1 FALSE 0 0 NA C coding 248 744 619 1362 PB.8202.1 chr15 - 1343 11 full-splice_match UBL7 ENST00000361351.8 1360 11 3 14 no_subtype FALSE canonical NA NA 72 None 17 0 0 FALSE 0 0 NA C coding 380 1140 102 1241 PB.4585.4 chr7 + 1982 14 incomplete-splice_match KMT2E ENST00000476671.5 2523 15 -13 554 3prime_fragment FALSE canonical NA NA 1877 None 10 8 2 FALSE 0 0 NA B coding 469 1407 574 1980 PB.439.2 chr1 - 4288 14 novel_in_catalog ZZZ3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 109 None 2 7 1 FALSE 0 0 NA A coding 902 2706 449 3154 PB.439.3 chr1 - 2695 1 genic_intron novelGene_728 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10851.1 chrX - 1425 3 intergenic novelGene_23 novel NA NA NA NA no_subtype FALSE canonical NA NA 69 None 2 5 2 FALSE 0 0 NA A coding 110 330 382 711 PB.3275.1 chr5 + 2642 3 antisense novelGene_ELOVL7_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 46 None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9823.1 chr19 - 5707 23 full-splice_match ADGRL1 ENST00000361434.7 5610 23 -110 13 no_subtype FALSE canonical NA NA 295 None 2 22 0 FALSE 0 0 NA A coding 1469 4407 391 4797 PB.4847.1 chr8 - 3027 12 full-splice_match KCTD9 ENST00000221200.8 3401 12 186 188 no_subtype TRUE canonical NA NA 83 None 9 11 0 FALSE 0 0 NA A coding 389 1167 36 1202 PB.3275.2 chr5 + 2588 1 antisense novelGene_ELOVL7_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4181.1 chr6 - 2785 1 genic_intron novelGene_1223 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5114.2 chr8 - 3810 29 full-splice_match KIAA0196 ENST00000318410.11 4187 29 73 304 no_subtype FALSE canonical NA NA 153 None 37 4 1 FALSE 0 0 NA A coding 1159 3477 278 3754 PB.1340.2 chr2 - 2673 16 novel_not_in_catalog MTIF2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 398 None 16 4 1 TRUE 0 0 NA B coding 727 2181 473 2653 PB.1161.2 chr1 + 1560 13 novel_not_in_catalog SCCPDH novel NA NA NA NA no_subtype FALSE canonical NA NA 1284 None 2 9 0 TRUE 0 0 NA C coding 421 1263 33 1295 PB.4585.1 chr7 + 2112 15 novel_in_catalog KMT2E novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2003 None 2 4 0 FALSE 0 0 NA B coding 306 918 1195 2112 PB.661.2 chr1 - 3122 5 full-splice_match GOLPH3L ENST00000271732.7 2999 5 -130 7 no_subtype FALSE canonical NA NA 163 None 43 7 0 FALSE 0 0 NA C coding 285 855 176 1030 PB.4161.1 chr6 + 2609 1 incomplete-splice_match HECA ENST00000367658.2 5614 4 3002 4 no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7971.1 chr15 - 3035 1 genic_intron novelGene_284 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4661.1 chr7 - 2524 11 full-splice_match CEP41 ENST00000223208.9 6513 11 221 3768 no_subtype FALSE canonical NA NA 83 None 2 9 0 FALSE 0 0 NA A coding 373 1119 51 1169 PB.7124.1 chr12 + 3555 1 full-splice_match ATXN7L3B ENST00000519948.3 7604 1 60 3989 no_subtype FALSE canonical NA NA NA None 93 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1876.1 chr2 - 3012 1 novel_in_catalog DNPEP novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA C coding 100 300 1499 1798 PB.8518.1 chr16 + 2865 9 full-splice_match IL21R ENST00000337929.7 4849 9 13 1971 no_subtype FALSE canonical NA NA 1327 None 2 5 0 FALSE 0 0 NA C coding 538 1614 461 2074 PB.5489.2 chr9 - 1461 2 genic_intron novelGene_1068 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1012 None 2 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4761.2 chr7 + 2578 14 novel_not_in_catalog GALNT11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2145 None 2 12 1 TRUE 0 0 NA B coding 379 1137 801 1937 PB.665.2 chr1 - 4321 23 novel_not_in_catalog ARNT novel NA NA NA NA no_subtype FALSE canonical NA NA 57 None 4 10 1 TRUE 0 0 NA C coding 436 1308 1096 2403 PB.2624.1 chr3 + 2538 16 full-splice_match EIF2B5 ENST00000273783.7 2655 16 115 2 no_subtype FALSE canonical NA NA 2113 None 17 1 0 FALSE 0 0 NA C coding 721 2163 8 2170 PB.8546.1 chr16 + 4651 19 full-splice_match TAOK2 ENST00000279394.7 4246 19 -409 4 no_subtype FALSE canonical NA NA 3440 None 3 9 0 FALSE 0 0 NA A coding 1049 3147 813 3959 PB.7959.230 chr14 - 1566 11 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 81 None 2 15 5 TRUE 0 0 NA B coding 196 588 848 1435 PB.4641.1 chr7 - 4118 2 full-splice_match GCC1 ENST00000321407.2 4149 2 14 17 no_subtype FALSE canonical NA NA 1443 None 26 7 0 FALSE 0 0 NA A coding 775 2325 412 2736 PB.4113.3 chr6 + 3046 7 novel_not_in_catalog NCOA7 novel NA NA NA NA no_subtype FALSE canonical NA NA 577 None 46 14 1 TRUE 0 0 NA C coding 219 657 54 710 PB.3813.19 chr6 - 3607 24 novel_in_catalog BAG6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 261 None 14 14 1 FALSE 0 0 NA C coding 1077 3231 275 3505 PB.4477.1 chr7 + 761 3 incomplete-splice_match RSBN1L ENST00000334955.12 6422 8 19 5642 3prime_fragment FALSE canonical NA NA 711 None 3 2 0 FALSE 0 0 NA B coding 251 753 9 761 PB.7501.1 chr13 - 3523 18 full-splice_match INTS6 ENST00000311234.8 3662 18 -38 177 no_subtype FALSE canonical NA NA 622 None 6 4 0 FALSE 0 0 NA A coding 887 2661 512 3172 PB.9585.1 chr18 - 1596 1 incomplete-splice_match RNF152 ENST00000312828.3 9501 2 7882 24 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8639.1 chr16 + 1619 9 full-splice_match COQ9 ENST00000262507.10 1677 9 45 13 no_subtype FALSE canonical NA NA 945 None 40 4 0 FALSE 0 0 NA C coding 318 954 25 978 PB.8639.3 chr16 + 2865 6 novel_in_catalog COQ9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1948 None 2 18 0 FALSE 0 0 NA C coding 262 786 8 793 PB.431.3 chr1 - 2966 10 novel_not_in_catalog ANKRD13C novel NA NA NA NA no_subtype FALSE canonical NA NA 739 None 4 10 0 FALSE 0 0 NA C coding 352 1056 310 1365 PB.431.1 chr1 - 4067 13 full-splice_match ANKRD13C ENST00000370944.8 4069 13 -5 7 no_subtype FALSE canonical NA NA 749 None 8 10 0 FALSE 0 0 NA C coding 541 1623 320 1942 PB.2746.3 chr4 - 3404 3 novel_in_catalog ZNF518B novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 109 None 3 5 0 FALSE 0 0 NA C coding 896 2688 716 3403 PB.2947.4 chr4 + 5998 12 novel_not_in_catalog HERC5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4340 None 2 47 1 TRUE 0 0 NA B coding 349 1047 3417 4463 PB.7575.1 chr13 - 2448 6 full-splice_match ANKRD10 ENST00000267339.6 2495 6 42 5 no_subtype FALSE canonical NA NA 303 None 8 9 0 FALSE 0 0 NA C coding 420 1260 94 1353 PB.4493.3 chr7 - 1541 7 novel_in_catalog SRI novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 60 None 2 11 0 FALSE 0 0 NA C coding 109 327 1028 1354 PB.4493.2 chr7 - 1864 8 novel_not_in_catalog SRI novel NA NA NA NA no_subtype TRUE canonical NA NA 69 None 5 14 2 FALSE 0 0 NA C coding 109 327 286 612 PB.4493.1 chr7 - 834 8 full-splice_match SRI ENST00000265729.6 2010 8 -5 1181 no_subtype FALSE canonical NA NA 109 None 19 5 0 FALSE 0 0 NA C coding 198 594 59 652 PB.8393.1 chr16 - 1934 10 novel_not_in_catalog BICDL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 40 None 3 1 0 FALSE 0 0 NA B coding 508 1524 55 1578 PB.8393.2 chr16 - 1683 1 novel_in_catalog BICDL2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA B coding 124 372 1266 1637 PB.4493.4 chr7 - 1547 7 novel_not_in_catalog SRI novel NA NA NA NA no_subtype FALSE canonical NA NA 69 None 3 12 1 FALSE 0 0 NA C coding 109 327 1037 1363 PB.7415.1 chr13 + 1521 2 genic_intron novelGene_286 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 302 None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4863.1 chr8 - 2984 1 incomplete-splice_match KIF13B ENST00000524189.5 8745 40 5756 6 no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.576.1 chr1 - 1730 7 novel_not_in_catalog RHOC novel NA NA NA NA no_subtype FALSE canonical NA NA 27 None 2 7 1 TRUE 0 0 NA B coding 193 579 35 613 PB.5021.1 chr8 - 3393 1 incomplete-splice_match TP53INP1 ENST00000448464.6 5631 5 2235 4 no_subtype FALSE canonical NA NA NA None 7 28 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2550.1 chr3 + 3856 6 full-splice_match TIPARP ENST00000295924.11 4109 6 248 5 no_subtype FALSE canonical NA NA 1774 None 8 6 0 FALSE 0 0 NA A coding 657 1971 249 2219 PB.3270.1 chr5 + 2851 12 novel_not_in_catalog GPBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2365 None 3 5 1 FALSE 0 0 NA C coding 473 1419 1103 2521 PB.706.1 chr1 + 2615 2 antisense novelGene_ADAR_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1044 None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4775.1 chr7 - 3900 28 full-splice_match NCAPG2 ENST00000356309.7 3930 28 26 4 no_subtype FALSE canonical NA NA 80 None 20 2 0 FALSE 0 0 NA C coding 1143 3429 120 3548 PB.4775.2 chr7 - 3946 29 novel_in_catalog NCAPG2 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical NA NA 25 None 6 4 1 FALSE 0 0 NA C coding 1143 3429 166 3594 PB.2307.2 chr3 - 2754 1 genic_intron novelGene_689 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6055.1 chr10 - 1494 12 full-splice_match TIAL1 ENST00000369093.6 5072 12 -206 3784 no_subtype FALSE canonical NA NA 268 None 10 0 0 FALSE 0 0 NA C coding 392 1176 237 1412 PB.7536.1 chr13 + 2712 8 full-splice_match NDFIP2 ENST00000620924.1 2324 8 -196 -192 no_subtype FALSE canonical NA NA 939 None 2 9 0 FALSE 0 0 NA A coding 242 726 209 934 PB.4080.3 chr6 + 2806 3 novel_not_in_catalog FIG4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1064 None 6 13 1 TRUE 0 0 NA C coding 106 318 132 449 PB.9873.1 chr19 + 971 5 full-splice_match CCDC124 ENST00000445755.6 938 5 1 -34 no_subtype FALSE canonical NA NA 507 None 3 3 1 FALSE 0 0 NA A coding 223 669 44 712 PB.1522.1 chr2 + 2766 1 incomplete-splice_match MAP4K4 ENST00000302217.9 6624 26 3857 2 no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA B coding 173 519 899 1417 PB.8522.7 chr16 - 3986 23 novel_in_catalog XPO6 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 148 None 8 3 0 FALSE 0 0 NA B coding 1111 3333 97 3429 PB.8522.5 chr16 - 3680 20 novel_not_in_catalog XPO6 novel NA NA NA NA no_subtype FALSE canonical NA NA 312 None 5 3 0 FALSE 0 0 NA B coding 992 2976 147 3122 PB.3694.2 chr5 - 2037 3 antisense novelGene_CANX_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 20 None 2 10 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.3694.1 chr5 - 1530 1 antisense novelGene_CANX_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 20 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6556.1 chr11 - 3152 25 novel_not_in_catalog INTS4 novel NA NA NA NA no_subtype FALSE canonical NA NA 95 None 43 2 1 TRUE 0 0 NA A coding 963 2889 42 2930 PB.1856.1 chr2 - 1786 11 full-splice_match AAMP ENST00000248450.8 1886 11 89 11 no_subtype FALSE canonical NA NA 203 None 84 0 0 FALSE 0 0 NA C coding 434 1302 83 1384 PB.3789.1 chr6 + 1458 5 novel_not_in_catalog LRRC16A novel NA NA NA NA no_subtype TRUE canonical NA NA 1064 None 2 6 0 TRUE 0 0 NA A coding 114 342 8 349 PB.4467.1 chr7 + 2419 15 incomplete-splice_match POR ENST00000461988.5 2522 16 101 2 internal_fragment FALSE canonical NA NA 1902 None 3 6 0 FALSE 0 0 NA B coding 680 2040 5 2044 PB.729.1 chr1 - 2659 11 novel_in_catalog YY1AP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 42 None 2 6 2 FALSE 0 0 NA B coding 750 2250 194 2443 PB.3636.2 chr5 + 6075 53 novel_not_in_catalog DOCK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5492 None 2 15 2 TRUE 0 0 NA B coding 1824 5472 81 5552 PB.8867.2 chr17 + 1697 10 full-splice_match RNF167 ENST00000262482.10 1915 10 210 8 no_subtype FALSE canonical NA NA 1197 None 34 2 0 FALSE 0 0 NA C coding 350 1050 447 1496 PB.8867.3 chr17 + 1548 9 full-splice_match RNF167 ENST00000575111.5 1757 9 227 -18 no_subtype FALSE canonical NA NA 1053 None 9 2 0 FALSE 0 0 NA C coding 350 1050 303 1352 PB.8867.1 chr17 + 1800 10 novel_in_catalog RNF167 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 1305 None 6 3 0 FALSE 0 0 NA C coding 350 1050 555 1604 PB.6881.1 chr12 + 1570 1 incomplete-splice_match PPFIBP1 ENST00000537927.5 5719 27 4136 14 no_subtype FALSE canonical NA NA NA None 14 10 0 FALSE 0 0 NA A coding 110 330 53 382 PB.8867.4 chr17 + 1221 8 novel_in_catalog RNF167 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 726 None 2 1 0 FALSE 0 0 NA C coding 315 945 81 1025 PB.2113.1 chr3 + 3624 15 full-splice_match CTNNB1 ENST00000349496.9 3737 15 101 12 no_subtype FALSE canonical NA NA 2316 None 75 6 0 FALSE 0 0 NA C coding 781 2343 180 2522 PB.2113.2 chr3 + 3195 16 full-splice_match CTNNB1 ENST00000396183.7 3268 16 71 2 no_subtype FALSE canonical NA NA 2572 None 58 5 0 FALSE 0 0 NA C coding 781 2343 215 2557 PB.2113.3 chr3 + 3261 16 full-splice_match CTNNB1 ENST00000396185.7 3356 16 93 2 no_subtype FALSE canonical NA NA 2479 None 41 7 0 FALSE 0 0 NA C coding 781 2343 122 2464 PB.10754.1 chr22 - 3543 10 novel_not_in_catalog TMEM184B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 129 None 11 21 1 TRUE 0 0 NA C coding 407 1221 188 1408 PB.2113.5 chr3 + 3004 16 novel_not_in_catalog CTNNB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2630 None 3 17 1 TRUE 0 0 NA C coding 781 2343 215 2557 PB.2113.6 chr3 + 2690 1 genic_intron novelGene_412 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1398.1 chr2 + 1405 6 full-splice_match SNRNP27 ENST00000244227.7 1802 6 400 -3 no_subtype FALSE canonical NA NA 438 None 6 8 0 FALSE 0 0 NA A coding 155 465 26 490 PB.10484.2 chr20 - 1941 4 novel_not_in_catalog HELZ2 novel NA NA NA NA no_subtype FALSE canonical NA NA 44 None 2 4 0 FALSE 0 0 NA B coding 171 513 930 1442 PB.5013.2 chr8 + 3231 3 antisense novelGene_CDH17_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3160 None 2 20 1 FALSE 0 0 NA A coding 122 366 729 1094 PB.10924.1 chrX + 1909 1 antisense novelGene_CASK_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6125.1 chr11 + 4131 30 novel_not_in_catalog MUC2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3910 None 6 6 1 TRUE 0 0 NA B coding 1368 4104 28 4131 PB.8236.1 chr15 + 3160 8 full-splice_match DNAJA4 ENST00000394855.7 3245 8 77 8 no_subtype FALSE canonical NA NA 1216 None 4 13 0 FALSE 0 0 NA A coding 426 1278 152 1429 PB.5013.8 chr8 - 3685 1 novel_in_catalog CDH17 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5013.9 chr8 - 3539 8 novel_in_catalog CDH17 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 73 None 3 18 0 FALSE 0 0 NA C coding 356 1068 94 1161 PB.9250.3 chr17 + 2659 12 novel_not_in_catalog SCPEP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2080 None 2 35 1 FALSE 0 0 NA C coding 293 879 30 908 PB.6974.1 chr12 - 3752 17 full-splice_match SLC11A2 ENST00000547198.5 2486 17 -53 -1213 no_subtype FALSE canonical NA NA 77 None 5 8 0 FALSE 0 0 NA C coding 568 1704 116 1819 PB.873.1 chr1 + 1529 1 antisense novelGene_RC3H1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 10 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3608.1 chr5 + 2688 9 novel_not_in_catalog CNOT8 novel NA NA NA NA no_subtype FALSE canonical NA NA 1198 None 2 13 1 TRUE 0 0 NA B coding 292 876 470 1345 PB.4331.1 chr7 + 6254 2 genic_intron novelGene_229 novel NA NA NA NA no_subtype FALSE canonical NA NA 1988 None 2 31 0 FALSE 0 0 NA A coding 156 468 2805 3272 PB.7110.1 chr12 + 1460 7 full-splice_match YEATS4 ENST00000247843.6 1434 7 60 -86 no_subtype FALSE canonical NA NA 724 None 2 4 0 FALSE 0 0 NA A coding 227 681 211 891 PB.906.2 chr1 + 3000 1 novel_in_catalog NPL novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 16 21 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9782.1 chr19 + 1496 8 novel_not_in_catalog CNN1 novel NA NA NA NA no_subtype TRUE canonical NA NA 723 None 584 4 0 TRUE 0 0 NA A coding 297 891 76 966 PB.9862.1 chr19 + 1853 9 full-splice_match GTPBP3 ENST00000324894.12 2579 9 3 723 no_subtype FALSE canonical NA NA 1318 None 4 0 0 FALSE 0 0 NA A coding 492 1476 66 1541 PB.4567.1 chr7 - 2060 1 genic_intron novelGene_921 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10212.1 chr19 + 2556 1 antisense novelGene_MZF1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 7 0 FALSE 0 0 NA A coding 136 408 1219 1626 PB.5388.3 chr9 - 2980 2 genic_intron novelGene_882 novel NA NA NA NA no_subtype FALSE canonical NA NA 2518 None 4 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5388.2 chr9 - 3010 6 full-splice_match ZNF510 ENST00000223428.8 5154 6 -18 2162 no_subtype FALSE canonical NA NA 31 None 6 8 1 FALSE 0 0 NA C coding 512 1536 721 2256 PB.5388.1 chr9 - 6427 8 novel_not_in_catalog ZNF510 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 31 None 2 42 2 TRUE 0 0 NA C coding 512 1536 721 2256 PB.2132.2 chr3 + 2873 2 genic_intron novelGene_437 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 56 None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9005.1 chr17 + 4081 6 novel_in_catalog TRAF4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2951 None 2 19 0 FALSE 0 0 NA A coding 352 1056 2526 3581 PB.2207.1 chr3 + 1637 9 full-splice_match GNAI2 ENST00000313601.10 2464 9 359 468 no_subtype FALSE canonical NA NA 1117 None 2 3 0 FALSE 0 0 NA C coding 355 1065 26 1090 PB.4595.9 chr7 + 1564 9 full-splice_match HBP1 ENST00000463202.5 2646 9 0 1082 no_subtype FALSE canonical NA NA 1401 None 4 0 0 FALSE 0 0 NA C coding 514 1542 17 1558 PB.3257.5 chr5 - 1542 6 full-splice_match PLPP1 ENST00000307259.8 1597 6 88 -33 no_subtype FALSE canonical NA NA 391 None 3 4 0 FALSE 0 0 NA C coding 284 852 334 1185 PB.8175.1 chr15 + 1232 1 incomplete-splice_match SMAD3 ENST00000327367.8 6247 9 5013 3 no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A coding 16 48 301 348 PB.4950.1 chr8 - 1940 7 full-splice_match ARMC1 ENST00000276569.7 3032 7 18 1074 no_subtype FALSE canonical NA NA 192 None 46 7 0 FALSE 0 0 NA A coding 275 825 249 1073 PB.3257.1 chr5 + 3839 27 full-splice_match SKIV2L2 ENST00000230640.9 4192 27 231 122 no_subtype FALSE canonical NA NA 3099 None 32 6 0 FALSE 0 0 NA C coding 1042 3126 24 3149 PB.3257.2 chr5 + 3957 28 novel_not_in_catalog SKIV2L2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3100 None 2 9 0 TRUE 0 0 NA C coding 1042 3126 25 3150 PB.7959.24 chr14 - 1504 9 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 17 5 TRUE 0 0 NA B coding 98 294 11 304 PB.7959.25 chr14 - 1512 8 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 83 None 2 13 2 TRUE 0 0 NA B coding 261 783 680 1462 PB.7959.26 chr14 - 1504 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 16 2 TRUE 0 0 NA B coding 261 783 672 1454 PB.7959.27 chr14 - 1429 8 fusion IGHA1,IGHV1-3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 50 None 2 16 4 TRUE 0 0 NA B coding 254 762 618 1379 PB.7959.20 chr14 - 1520 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 116 None 2 17 2 TRUE 0 0 NA B coding 246 738 50 787 PB.5003.2 chr8 + 2668 7 novel_in_catalog CPNE3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 603 None 2 22 0 FALSE 0 0 NA C coding 184 552 145 696 PB.5003.1 chr8 + 2863 17 full-splice_match CPNE3 ENST00000517490.5 4865 17 11 1991 no_subtype FALSE canonical NA NA 1643 None 5 7 0 FALSE 0 0 NA C coding 537 1611 153 1763 PB.7959.23 chr14 - 1454 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 15 3 TRUE 0 0 NA B coding 251 753 651 1403 PB.1443.1 chr2 - 1303 10 full-splice_match CAPG ENST00000409724.5 1151 10 -14 -138 no_subtype FALSE canonical NA NA 105 None 3 0 0 FALSE 0 0 NA C coding 348 1044 119 1162 PB.7959.28 chr14 - 1543 7 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 118 None 2 18 2 TRUE 0 0 NA B coding 254 762 732 1493 PB.8272.25 chr15 + 6294 10 novel_in_catalog AKAP13 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1571 None 2 50 0 FALSE 0 0 NA B coding 511 1533 86 1618 PB.3566.2 chr5 + 3879 4 novel_not_in_catalog GRPEL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2224 None 3 28 1 TRUE 0 0 NA B coding 122 366 20 385 PB.8272.26 chr15 + 5743 8 novel_not_in_catalog AKAP13 novel NA NA NA NA no_subtype FALSE canonical NA NA 1016 None 3 39 0 TRUE 0 0 NA B coding 306 918 146 1063 PB.1713.1 chr2 - 3367 13 full-splice_match KIAA1715 ENST00000272748.8 7610 13 73 4170 no_subtype FALSE canonical NA NA 113 None 11 6 0 FALSE 0 0 NA A coding 428 1284 176 1459 PB.8272.23 chr15 + 6298 12 novel_not_in_catalog AKAP13 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2648 None 2 44 0 TRUE 0 0 NA B coding 511 1533 159 1691 PB.8272.22 chr15 + 6502 12 incomplete-splice_match AKAP13 ENST00000394510.6 9128 29 2618 8 internal_fragment FALSE canonical NA NA 1779 None 5 41 0 FALSE 0 0 NA B coding 600 1800 27 1826 PB.1432.3 chr2 + 3349 12 novel_not_in_catalog TTC31 novel NA NA NA NA no_subtype FALSE canonical NA NA 2051 None 2 8 0 TRUE 0 0 NA B coding 248 744 22 765 PB.8272.29 chr15 + 2418 1 incomplete-splice_match AKAP13 ENST00000394510.6 9128 29 6678 33 no_subtype FALSE canonical NA NA NA None 19 23 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1383.1 chr2 + 1304 1 full-splice_match AC007318.5 ENST00000467568.2 881 1 -133 -290 no_subtype FALSE canonical NA NA NA None 3 2 0 FALSE 0 0 NA A coding 282 846 168 1013 PB.11195.2 chrX - 1315 8 full-splice_match BCAP31 ENST00000345046.10 1589 8 270 4 no_subtype FALSE canonical NA NA 94 None 29 3 0 FALSE 0 0 NA A coding 246 738 139 876 PB.2989.1 chr4 - 1175 12 full-splice_match PPA2 ENST00000341695.9 1684 12 8 501 no_subtype FALSE canonical NA NA 181 None 3 1 0 FALSE 0 0 NA C coding 334 1002 24 1025 PB.2989.3 chr4 - 1602 1 genic PPA2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3969.5 chr6 - 2983 3 novel_not_in_catalog ELOVL5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2877 None 2 23 2 TRUE 0 0 NA C coding 108 324 2568 2891 PB.7587.1 chr13 + 2036 21 novel_not_in_catalog CDC16 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1923 None 2 2 1 TRUE 0 0 NA A coding 620 1860 33 1892 PB.8786.1 chr16 + 2923 13 novel_not_in_catalog KIAA0513 novel NA NA NA NA no_subtype FALSE canonical NA NA 2842 None 8 17 1 TRUE 0 0 NA B coding 401 1203 243 1445 PB.10112.1 chr19 + 3345 23 full-splice_match AP2A1 ENST00000354293.9 3388 23 46 -3 no_subtype TRUE canonical NA NA 2910 None 84 3 0 FALSE 0 0 NA A coding 955 2865 121 2985 PB.2745.1 chr4 - 2137 15 full-splice_match WDR1 ENST00000499869.6 3054 15 97 820 no_subtype FALSE canonical NA NA 113 None 429 0 0 FALSE 0 0 NA A coding 606 1818 98 1915 PB.4787.1 chr8 - 3756 3 full-splice_match MFHAS1 ENST00000276282.6 6414 3 606 2052 no_subtype FALSE canonical NA NA 2979 None 4 3 0 FALSE 0 0 NA A coding 797 2391 747 3137 PB.1008.4 chr1 - 1649 13 novel_in_catalog EIF2D novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 182 None 4 1 0 FALSE 0 0 NA C coding 507 1521 127 1647 PB.403.3 chr1 - 3001 3 antisense novelGene_NFIA_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 24 None 8 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.403.2 chr1 - 2977 2 antisense novelGene_NFIA_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 23 None 6 11 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.2873.8 chr4 - 3208 2 genic_intron novelGene_686 novel NA NA NA NA no_subtype FALSE canonical NA NA 226 None 2 21 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.1008.2 chr1 - 1993 15 full-splice_match EIF2D ENST00000271764.6 2005 15 4 8 no_subtype FALSE canonical NA NA 169 None 15 0 0 FALSE 0 0 NA C coding 584 1752 114 1865 PB.1008.3 chr1 - 1468 1 novel_in_catalog EIF2D novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA C coding 40 120 192 311 PB.9716.2 chr19 + 3140 22 novel_not_in_catalog ADGRE1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3120 None 5 6 0 TRUE 0 0 NA B coding 797 2391 27 2417 PB.2636.2 chr3 - 1437 1 genic_intron novelGene_1347 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2998.2 chr4 + 2003 1 genic_intron novelGene_970 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.247 chr14 - 1722 7 novel_not_in_catalog IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 41 None 5 2 0 TRUE 0 0 NA B coding 396 1188 277 1464 PB.4022.6 chr6 - 2537 11 full-splice_match SYNCRIP ENST00000369622.7 3023 11 370 116 no_subtype FALSE canonical NA NA 119 None 5 1 0 FALSE 0 0 NA C coding 623 1869 132 2000 PB.8891.1 chr17 - 1381 8 full-splice_match CTDNEP1 ENST00000574322.5 1708 8 319 8 no_subtype FALSE canonical NA NA 162 None 2 4 0 FALSE 0 0 NA A coding 244 732 61 792 PB.6873.1 chr12 + 1501 3 full-splice_match SSPN ENST00000538142.5 553 3 38 -986 no_subtype FALSE canonical NA NA 211 None 2 9 0 FALSE 0 0 NA C coding 140 420 155 574 PB.11005.12 chrX + 1236 1 incomplete-splice_match MSN ENST00000360270.6 3944 13 2706 3 no_subtype FALSE canonical NA NA NA None 15 3 0 FALSE 0 0 NA B coding 99 297 310 606 PB.8160.2 chr15 + 2124 2 genic_intron novelGene_619 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1654 None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3969.2 chr6 - 1465 8 full-splice_match ELOVL5 ENST00000304434.10 2827 8 70 1292 no_subtype FALSE canonical NA NA 121 None 401 2 0 FALSE 0 0 NA C coding 299 897 130 1026 PB.3142.2 chr4 + 5512 3 genic_intron novelGene_1344 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5398 None 7 29 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6962.1 chr12 + 3205 13 full-splice_match SMARCD1 ENST00000394963.8 3658 13 380 73 no_subtype FALSE canonical NA NA 1512 None 10 11 0 FALSE 0 0 NA C coding 515 1545 19 1563 PB.1938.1 chr2 - 4138 29 novel_not_in_catalog COL6A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 150 None 2 15 1 TRUE 0 0 NA B coding 993 2979 403 3381 PB.4938.5 chr8 + 3205 4 novel_in_catalog SDCBP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2056 None 3 24 0 FALSE 0 0 NA C coding 111 333 1776 2108 PB.9716.1 chr19 + 3100 20 novel_not_in_catalog ADGRE1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2800 None 21 6 0 TRUE 0 0 NA B coding 797 2391 9 2399 PB.4938.3 chr8 + 2016 8 novel_in_catalog SDCBP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 860 None 9 7 0 FALSE 0 0 NA C coding 298 894 19 912 PB.10107.1 chr19 + 1352 7 full-splice_match FCGRT ENST00000221466.9 1798 7 442 4 no_subtype FALSE canonical NA NA 1032 None 180 0 0 FALSE 0 0 NA C coding 365 1095 45 1139 PB.11166.2 chrX + 3764 5 full-splice_match ZNF449 ENST00000339249.4 3773 5 0 9 no_subtype FALSE canonical NA NA 813 None 3 16 0 FALSE 0 0 NA A coding 518 1554 141 1694 PB.7959.240 chr14 - 1576 13 fusion IGHV5-51,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 103 None 2 16 6 TRUE 0 0 NA B coding 196 588 863 1450 PB.6216.2 chr11 - 3359 24 novel_not_in_catalog COPB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 40 None 2 11 1 TRUE 0 0 NA B coding 953 2859 188 3046 PB.6216.3 chr11 - 3294 23 novel_not_in_catalog COPB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 106 None 6 7 0 TRUE 0 0 NA B coding 953 2859 164 3022 PB.7834.1 chr14 - 2477 20 full-splice_match VIPAS39 ENST00000557658.5 2562 20 84 1 no_subtype FALSE canonical NA NA 62 None 5 1 0 FALSE 0 0 NA A coding 493 1479 63 1541 PB.6216.1 chr11 - 3299 23 novel_not_in_catalog COPB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 79 None 128 4 0 TRUE 0 0 NA B coding 953 2859 137 2995 PB.1240.6 chr2 + 3313 13 full-splice_match ZNF512 ENST00000556601.5 3543 13 104 126 no_subtype FALSE canonical NA NA 1376 None 4 5 1 FALSE 0 0 NA C coding 488 1464 219 1682 PB.87.3 chr1 + 1855 8 novel_not_in_catalog NECAP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 620 None 2 6 1 TRUE 0 0 NA B coding 167 501 18 518 PB.6216.4 chr11 - 1678 14 novel_not_in_catalog COPB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 151 None 2 2 0 TRUE 0 0 NA B coding 490 1470 209 1678 PB.87.1 chr1 + 2029 8 novel_not_in_catalog NECAP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 796 None 58 5 1 FALSE 0 0 NA B coding 223 669 50 718 PB.10029.1 chr19 - 2693 10 novel_in_catalog LIPE novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 49 None 10 6 0 FALSE 0 0 NA A coding 786 2358 37 2394 PB.10389.1 chr20 + 1628 14 full-splice_match IFT52 ENST00000373030.7 1757 14 46 83 no_subtype FALSE canonical NA NA 1350 None 11 2 1 FALSE 0 0 NA A coding 437 1311 85 1395 PB.1697.1 chr2 - 2770 4 genic_intron novelGene_1316 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 63 None 2 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4728.1 chr7 - 2399 10 novel_not_in_catalog TPK1 novel NA NA NA NA no_subtype TRUE canonical NA NA 86 None 2 14 2 TRUE 0 0 NA A coding 243 729 103 831 PB.1000.1 chr1 - 3384 5 full-splice_match SLC45A3 ENST00000367145.3 3341 5 -47 4 no_subtype FALSE canonical NA NA 113 None 26 13 0 FALSE 0 0 NA C coding 553 1659 344 2002 PB.1000.2 chr1 - 3354 5 novel_not_in_catalog SLC45A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 84 None 9 16 0 FALSE 0 0 NA C coding 553 1659 315 1973 PB.1000.3 chr1 - 4019 4 novel_in_catalog SLC45A3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 43 None 20 17 0 FALSE 0 0 NA C coding 397 1191 274 1464 PB.3235.1 chr5 + 2764 1 novel_in_catalog RP11-159F24.3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1142.1 chr1 - 1596 10 full-splice_match FH ENST00000366560.3 1797 10 7 194 no_subtype FALSE canonical NA NA 164 None 30 0 0 FALSE 0 0 NA A coding 510 1530 33 1562 PB.6747.1 chr11 - 1580 1 genic_intron novelGene_1156 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4202.1 chr6 - 2762 23 novel_not_in_catalog SYNE1 novel NA NA NA NA no_subtype TRUE canonical NA NA 257 None 4 1 0 TRUE 0 0 NA B coding 760 2280 481 2760 PB.1906.2 chr2 - 1892 15 novel_not_in_catalog SP110 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 86 None 4 5 1 TRUE 0 0 NA B coding 517 1551 88 1638 PB.6323.1 chr11 + 1966 1 genic_intron novelGene_475 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 25 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.266.22 chr1 - 3171 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 5 5 1 FALSE 0 0 NA C coding 825 2475 431 2905 PB.266.20 chr1 - 3143 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 62 None 2 22 2 TRUE 0 0 NA C coding 836 2508 323 2830 PB.266.25 chr1 - 2986 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 55 None 2 9 1 TRUE 0 0 NA C coding 836 2508 200 2707 PB.1020.1 chr1 - 5596 1 full-splice_match C1orf132 ENST00000385231.3 88 1 -5244 -264 no_subtype FALSE canonical NA NA NA None 2 32 0 FALSE 0 0 NA C coding 100 300 4960 5259 PB.4266.1 chr7 + 1575 1 genic MAFK novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.959.1 chr1 + 1641 6 full-splice_match TIMM17A ENST00000367287.4 1659 6 19 -1 no_subtype FALSE canonical NA NA 447 None 24 3 0 FALSE 0 0 NA C coding 171 513 18 530 PB.266.28 chr1 - 3212 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 65 None 2 10 2 TRUE 0 0 NA C coding 836 2508 428 2935 PB.5179.4 chr8 + 2884 12 novel_in_catalog PPP1R16A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2291 None 3 6 0 FALSE 0 0 NA B coding 528 1584 1089 2672 PB.9487.1 chr18 + 1586 13 novel_not_in_catalog NAPG novel NA NA NA NA no_subtype FALSE canonical NA NA 861 None 2 14 0 TRUE 0 0 NA A coding 312 936 67 1002 PB.9455.1 chr17 + 1537 11 full-splice_match NARF ENST00000309794.15 3949 11 135 2277 no_subtype FALSE canonical NA NA 1192 None 27 1 0 FALSE 0 0 NA A coding 456 1368 64 1431 PB.7906.1 chr14 + 2968 2 genic_intron novelGene_901 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1780 None 4 23 0 FALSE 0 0 NA A coding 134 402 67 468 PB.10480.1 chr20 - 3176 2 novel_not_in_catalog YTHDF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1306 None 4 28 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.9621.1 chr19 - 2765 14 full-splice_match MIER2 ENST00000264819.6 6884 14 -14 4133 no_subtype FALSE canonical NA NA 23 None 59 13 0 FALSE 0 0 NA C coding 545 1635 15 1649 PB.8645.2 chr16 + 2605 12 full-splice_match ADGRG3 ENST00000333493.8 2728 12 119 4 no_subtype TRUE canonical NA NA 1582 None 10 7 0 FALSE 0 0 NA A coding 549 1647 43 1689 PB.10480.2 chr20 - 2927 4 novel_in_catalog YTHDF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 27 None 2 19 0 FALSE 0 0 NA B coding 509 1527 126 1652 PB.9772.1 chr19 - 2084 10 full-splice_match YIPF2 ENST00000586748.5 1550 10 30 -564 no_subtype FALSE canonical NA NA 113 None 7 9 0 FALSE 0 0 NA A coding 316 948 144 1091 PB.2494.3 chr3 - 2694 10 novel_not_in_catalog PIK3CB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 179 None 2 22 1 TRUE 0 0 NA B coding 452 1356 319 1674 PB.6251.3 chr11 + 2821 2 genic_intron novelGene_306 novel NA NA NA NA no_subtype FALSE canonical NA NA 1771 None 3 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2950.1 chr4 - 2862 1 genic_intron novelGene_800 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3243.5 chr5 + 1622 1 genic_intron novelGene_505 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9579.3 chr18 + 2789 2 genic_intron novelGene_562 novel NA NA NA NA no_subtype FALSE canonical NA NA 375 None 3 8 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9738.13 chr19 - 3709 28 novel_in_catalog MYO1F novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 140 None 7 4 1 FALSE 0 0 NA C coding 1053 3159 138 3296 PB.3495.4 chr5 - 1908 10 novel_not_in_catalog H2AFY novel NA NA NA NA no_subtype FALSE canonical NA NA 168 None 79 5 0 TRUE 0 0 NA C coding 371 1113 202 1314 PB.3495.5 chr5 - 1874 10 novel_not_in_catalog H2AFY novel NA NA NA NA no_subtype FALSE non_canonical NA NA 169 None 3 13 2 TRUE 0 0 NA C coding 199 597 203 799 PB.6579.2 chr11 + 1552 12 novel_not_in_catalog EED novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1216 None 12 1 1 TRUE 0 0 NA C coding 324 972 17 988 PB.5446.1 chr9 - 3048 5 novel_not_in_catalog ZFP37 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 248 None 2 10 1 TRUE 0 0 NA A coding 630 1890 117 2006 PB.7981.2 chr15 - 2675 11 novel_not_in_catalog KATNBL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 85 None 19 7 0 TRUE 0 0 NA C coding 304 912 100 1011 PB.7981.3 chr15 - 1592 10 full-splice_match KATNBL1 ENST00000256544.7 2723 10 -8 1139 no_subtype FALSE canonical NA NA 137 None 2 3 0 FALSE 0 0 NA C coding 304 912 152 1063 PB.7981.6 chr15 - 2858 1 novel_in_catalog KATNBL1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7981.7 chr15 - 3362 5 full-splice_match KATNBL1 ENST00000560671.5 924 5 -17 -2421 no_subtype FALSE canonical NA NA 128 None 2 15 0 FALSE 0 0 NA C coding 186 558 143 700 PB.6610.1 chr11 - 2521 1 incomplete-splice_match TMEM123 ENST00000361236.7 3321 4 795 6 no_subtype FALSE canonical NA NA NA None 8 24 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3576.3 chr5 - 3871 21 novel_in_catalog CSF1R novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 236 None 297 19 0 FALSE 0 0 NA B coding 972 2916 188 3103 PB.3576.4 chr5 - 3378 19 incomplete-splice_match CSF1R ENST00000286301.7 3989 22 601 10 5prime_fragment FALSE canonical NA NA 283 None 5 9 0 FALSE 0 0 NA B coding 824 2472 136 2607 PB.6610.2 chr11 - 1580 5 full-splice_match TMEM123 ENST00000398136.6 3579 5 30 1969 no_subtype FALSE canonical NA NA 491 None 320 12 1 FALSE 0 0 NA C coding 208 624 392 1015 PB.7747.7 chr14 + 2782 1 genic_intron novelGene_590 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9704.2 chr19 - 3221 1 genic_intron novelGene_40 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A coding 36 108 234 341 PB.2378.2 chr3 - 1843 1 genic_intron novelGene_1007 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6307.5 chr11 - 2800 18 novel_not_in_catalog ARFGAP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 98 None 17 14 1 TRUE 0 0 NA B coding 535 1605 27 1631 PB.9039.1 chr17 + 5447 23 novel_not_in_catalog NF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 3639 None 2 11 0 FALSE 0 0 NA B coding 1027 3081 699 3779 PB.7618.1 chr14 + 1551 2 full-splice_match C14orf119 ENST00000319074.5 3660 2 765 1344 no_subtype FALSE canonical NA NA 90 None 11 7 0 FALSE 0 0 NA A coding 140 420 92 511 PB.3697.3 chr5 - 1673 2 novel_in_catalog RNF130 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 285 None 2 8 0 FALSE 0 0 NA C coding 151 453 39 491 PB.1467.1 chr2 - 1626 2 genic_intron novelGene_793 novel NA NA NA NA no_subtype FALSE canonical NA NA 1397 None 3 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2378.1 chr3 - 3335 18 novel_not_in_catalog SPICE1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 97 None 2 7 1 TRUE 0 0 NA A coding 855 2565 100 2664 PB.6307.2 chr11 - 2666 16 novel_not_in_catalog ARFGAP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 138 None 2 13 1 TRUE 0 0 NA B coding 476 1428 67 1494 PB.1294.1 chr2 + 3577 25 novel_not_in_catalog EML4 novel NA NA NA NA no_subtype TRUE canonical NA NA 2685 None 34 5 0 TRUE 0 0 NA C coding 981 2943 214 3156 PB.7347.1 chr12 - 2637 4 full-splice_match VPS37B ENST00000267202.6 3028 4 373 18 no_subtype FALSE canonical NA NA 120 None 2 12 0 FALSE 0 0 NA C coding 285 855 10 864 PB.2482.1 chr3 - 4146 10 full-splice_match AMOTL2 ENST00000249883.9 4488 10 60 282 no_subtype FALSE canonical NA NA 193 None 5 9 0 FALSE 0 0 NA A coding 780 2340 255 2594 PB.1294.2 chr2 + 5494 23 full-splice_match EML4 ENST00000318522.9 5549 23 49 6 no_subtype FALSE canonical NA NA 2685 None 2 23 2 FALSE 0 0 NA C coding 981 2943 214 3156 PB.4022.5 chr6 - 2555 11 novel_in_catalog SYNCRIP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 122 None 2 3 0 FALSE 0 0 NA C coding 623 1869 135 2003 PB.11206.40 chrX - 8098 46 novel_not_in_catalog FLNA novel NA NA NA NA no_subtype FALSE canonical NA NA 485 None 16 2 0 FALSE 0 0 NA C coding 2557 7671 113 7783 PB.8169.1 chr15 - 1109 3 full-splice_match SNAPC5 ENST00000565465.1 1069 3 -17 -23 no_subtype FALSE canonical NA NA 287 None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8992.1 chr17 + 2458 3 full-splice_match TMEM97 ENST00000226230.7 2568 3 107 3 no_subtype FALSE canonical NA NA 309 None 5 25 1 FALSE 0 0 NA A coding 176 528 39 566 PB.2558.2 chr3 + 1453 10 incomplete-splice_match SMC4 ENST00000357388.7 5471 24 346 3672 3prime_fragment FALSE canonical NA NA 1377 None 9 1 0 FALSE 0 0 NA B coding 449 1347 106 1452 PB.10009.1 chr19 + 1452 5 novel_not_in_catalog CCDC97 novel NA NA NA NA no_subtype FALSE canonical NA NA 799 None 5 3 0 TRUE 0 0 NA B coding 374 1122 19 1140 PB.10009.2 chr19 + 2535 6 novel_not_in_catalog CCDC97 novel NA NA NA NA no_subtype TRUE canonical NA NA 934 None 2 7 0 TRUE 0 0 NA B coding 343 1029 24 1052 PB.6602.1 chr11 + 3213 5 genic_intron novelGene_870 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2993 None 2 20 3 FALSE 0 0 NA B non_coding NA NA NA NA PB.6602.3 chr11 + 2521 1 genic_intron novelGene_875 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6602.2 chr11 + 2149 1 genic_intron novelGene_873 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7322.1 chr12 - 1401 6 full-splice_match C12orf43 ENST00000288757.7 4469 6 -4 3072 no_subtype FALSE canonical NA NA 162 None 2 6 0 FALSE 0 0 NA A coding 262 786 18 803 PB.7989.1 chr15 + 2854 11 full-splice_match C15orf41 ENST00000566621.5 2866 11 34 -22 no_subtype FALSE canonical NA NA 932 None 2 13 0 FALSE 0 0 NA A coding 281 843 217 1059 PB.7490.1 chr13 + 2809 16 novel_not_in_catalog SETDB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2695 None 30 6 1 TRUE 0 0 NA C coding 718 2154 654 2807 PB.9497.1 chr18 - 1619 10 full-splice_match PTPN2 ENST00000327283.7 1706 10 77 10 no_subtype FALSE canonical NA NA 189 None 46 1 0 FALSE 0 0 NA C coding 387 1161 121 1281 PB.9497.2 chr18 - 1674 11 novel_in_catalog PTPN2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 145 None 3 2 1 FALSE 0 0 NA C coding 397 1191 77 1267 PB.7490.2 chr13 + 2852 17 novel_not_in_catalog SETDB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2739 None 2 7 2 TRUE 0 0 NA C coding 718 2154 698 2851 PB.10188.1 chr19 + 2738 4 full-splice_match ZNF547 ENST00000282282.3 2739 4 -9 10 no_subtype FALSE canonical NA NA 310 None 2 12 0 FALSE 0 0 NA A coding 402 1206 160 1365 PB.4244.1 chr6 + 2672 5 genic_intron novelGene_1285 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2559 None 2 18 4 FALSE 0 0 NA A non_coding NA NA NA NA PB.6185.1 chr11 - 3308 6 full-splice_match RIC3 ENST00000343202.8 2929 6 28 -407 no_subtype FALSE canonical NA NA 162 None 2 15 0 FALSE 0 0 NA A coding 368 1104 39 1142 PB.5753.2 chr10 + 4184 22 novel_in_catalog BMS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3652 None 7 2 0 FALSE 0 0 NA C coding 1282 3846 35 3880 PB.5753.1 chr10 + 4228 23 full-splice_match BMS1 ENST00000374518.5 7753 23 -15 3540 no_subtype FALSE canonical NA NA 3696 None 3 2 0 FALSE 0 0 NA C coding 1282 3846 79 3924 PB.733.1 chr1 - 2196 6 novel_not_in_catalog RIT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 119 None 16 11 0 FALSE 0 0 NA A coding 219 657 163 819 PB.6751.1 chr11 + 2909 20 novel_not_in_catalog GLB1L2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2752 None 6 9 1 TRUE 0 0 NA B coding 636 1908 99 2006 PB.6751.2 chr11 + 2885 20 novel_not_in_catalog GLB1L2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2731 None 3 16 1 TRUE 0 0 NA B coding 636 1908 69 1976 PB.2761.1 chr4 + 1611 13 full-splice_match LAP3 ENST00000606142.5 1876 13 3 262 no_subtype FALSE canonical NA NA 1338 None 71 1 0 FALSE 0 0 NA A coding 488 1464 62 1525 PB.2867.1 chr4 - 2700 2 genic_intron novelGene_668 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2462 None 3 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9637.20 chr19 + 2204 9 incomplete-splice_match ARHGAP45 ENST00000587602.5 3875 21 1669 2 internal_fragment FALSE canonical NA NA 1237 None 2 17 0 FALSE 0 0 NA C coding 485 1455 127 1581 PB.11083.1 chrX + 2284 2 full-splice_match HNRNPH2 ENST00000316594.5 2223 2 -69 8 no_subtype FALSE canonical NA NA 94 None 5 2 0 FALSE 0 0 NA A coding 449 1347 148 1494 PB.2322.1 chr3 - 3234 15 full-splice_match PROS1 ENST00000394236.7 3560 15 227 99 no_subtype FALSE canonical NA NA 166 None 41 10 0 FALSE 0 0 NA A coding 676 2028 91 2118 PB.7265.1 chr12 + 1160 3 full-splice_match ERP29 ENST00000261735.3 1735 3 116 459 no_subtype FALSE canonical NA NA 317 None 16 2 0 FALSE 0 0 NA A coding 261 783 35 817 PB.130.3 chr1 - 2510 10 novel_in_catalog HNRNPR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 111 None 12 1 0 FALSE 0 0 NA C coding 532 1596 258 1853 PB.7531.13 chr13 - 6570 38 novel_not_in_catalog MYCBP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 15 None 2 0 0 TRUE 0 0 NA B coding 2165 6495 76 6570 PB.8744.1 chr16 - 3673 28 novel_not_in_catalog WDR59 novel NA NA NA NA no_subtype TRUE canonical NA NA 205 None 5 4 0 TRUE 0 0 NA A coding 974 2922 152 3073 PB.8212.2 chr15 + 1532 11 novel_not_in_catalog NEIL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1252 None 6 4 0 TRUE 0 0 NA B coding 390 1170 151 1320 PB.7531.10 chr13 - 2661 1 novel_in_catalog MYCBP2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA B coding 495 1485 1177 2661 PB.3512.6 chr5 + 2705 14 novel_in_catalog MATR3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1641 None 26 3 0 FALSE 0 0 NA C coding 509 1527 163 1689 PB.3512.4 chr5 + 3780 15 full-splice_match MATR3 ENST00000394805.7 4843 15 102 961 no_subtype FALSE canonical NA NA 2726 None 233 5 0 FALSE 0 0 NA C coding 847 2541 234 2774 PB.9232.1 chr17 + 1885 17 novel_not_in_catalog ACSF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1828 None 5 2 0 TRUE 0 0 NA B coding 615 1845 32 1876 PB.2292.1 chr3 - 1922 1 full-splice_match EOGT ENST00000615922.1 1931 1 -4 13 no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A coding 135 405 46 450 PB.4708.12 chr7 + 3564 1 genic_intron novelGene_1186 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A coding 101 303 228 530 PB.9750.1 chr19 + 1866 1 antisense novelGene_DNMT1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A coding 149 447 742 1188 PB.4708.10 chr7 + 3469 2 genic_intron novelGene_1184 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2749 None 2 20 0 FALSE 0 0 NA A coding 9 27 387 413 PB.10240.2 chr20 - 1124 9 full-splice_match DDRGK1 ENST00000354488.7 1306 9 8 174 no_subtype FALSE canonical NA NA 141 None 2 15 0 FALSE 0 0 NA C coding 314 942 51 992 PB.10240.1 chr20 - 1110 10 novel_not_in_catalog DDRGK1 novel NA NA NA NA no_subtype TRUE canonical NA NA 128 None 9 2 0 TRUE 0 0 NA C coding 314 942 38 979 PB.5971.1 chr10 - 3094 4 novel_not_in_catalog NDUFB8 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 112 None 5 27 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.1390.1 chr2 - 3443 1 genic_intron novelGene_642 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3651.1 chr5 + 3002 8 novel_in_catalog CREBRF novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1896 None 2 6 0 FALSE 0 0 NA B coding 631 1893 117 2009 PB.9090.1 chr17 - 2785 1 incomplete-splice_match MED1 ENST00000577831.5 4584 16 1790 10 no_subtype FALSE canonical NA NA NA None 4 1 0 FALSE 0 0 NA A coding 922 2766 20 2785 PB.6870.2 chr12 + 2474 22 novel_in_catalog LRMP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1959 None 9 4 2 FALSE 0 0 NA B coding 499 1497 704 2200 PB.9351.3 chr17 - 1948 8 novel_not_in_catalog NAT9 novel NA NA NA NA no_subtype FALSE canonical NA NA 101 None 5 7 2 FALSE 0 0 NA B coding 206 618 162 779 PB.9351.2 chr17 - 3116 5 novel_not_in_catalog NAT9 novel NA NA NA NA no_subtype FALSE canonical NA NA 532 None 2 22 1 FALSE 0 0 NA B coding 149 447 542 988 PB.7602.7 chr14 - 2943 9 novel_not_in_catalog HNRNPC novel NA NA NA NA no_subtype FALSE canonical NA NA 128 None 6 5 3 FALSE 0 0 NA C coding 171 513 1764 2276 PB.7602.4 chr14 - 2883 8 novel_in_catalog HNRNPC novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 128 None 2 16 1 FALSE 0 0 NA C coding 293 879 165 1043 PB.6986.1 chr12 + 3217 12 incomplete-splice_match TNS2 ENST00000379902.7 4737 29 1520 0 internal_fragment FALSE canonical NA NA 2591 None 4 6 0 FALSE 0 0 NA A coding 904 2712 16 2727 PB.7602.2 chr14 - 1395 9 full-splice_match HNRNPC ENST00000554455.5 1784 9 0 389 no_subtype FALSE canonical NA NA 128 None 36 1 1 FALSE 0 0 NA C coding 306 918 191 1108 PB.1252.1 chr2 - 2216 1 antisense novelGene_LBH_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A coding 109 327 546 872 PB.7602.1 chr14 - 1738 9 novel_not_in_catalog HNRNPC novel NA NA NA NA no_subtype FALSE canonical NA NA 127 None 224 2 1 FALSE 0 0 NA C coding 171 513 560 1072 PB.10916.1 chrX + 1738 8 full-splice_match TSPAN7 ENST00000378482.6 1909 8 174 -3 no_subtype FALSE canonical NA NA 760 None 59 2 0 FALSE 0 0 NA A coding 244 732 19 750 PB.4613.1 chr7 + 2544 14 novel_not_in_catalog ZNF277 novel NA NA NA NA no_subtype TRUE canonical NA NA 1511 None 11 7 0 TRUE 0 0 NA A coding 450 1350 17 1366 PB.6524.2 chr11 - 3382 15 novel_not_in_catalog PGM2L1 novel NA NA NA NA no_subtype TRUE canonical NA NA 417 None 2 10 1 TRUE 0 0 NA C coding 622 1866 307 2172 PB.9601.1 chr18 + 1398 6 full-splice_match TIMM21 ENST00000169551.10 3095 6 24 1673 no_subtype TRUE canonical NA NA 916 None 2 5 0 FALSE 0 0 NA A coding 248 744 275 1018 PB.5951.1 chr10 + 1748 11 full-splice_match ZDHHC16 ENST00000370854.7 1798 11 51 -1 no_subtype FALSE canonical NA NA 1157 None 2 2 0 FALSE 0 0 NA C coding 377 1131 139 1269 PB.3003.1 chr4 - 1368 7 full-splice_match CASP6 ENST00000265164.6 1548 7 36 144 no_subtype FALSE canonical NA NA 82 None 8 5 0 FALSE 0 0 NA A coding 293 879 43 921 PB.3551.1 chr5 - 4317 4 full-splice_match PCDH12 ENST00000231484.3 6562 4 862 1383 no_subtype FALSE canonical NA NA 3229 None 4 5 0 FALSE 0 0 NA A coding 1183 3549 353 3901 PB.1717.1 chr2 + 3086 1 genic_intron novelGene_1335 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10015.1 chr19 + 3776 3 novel_not_in_catalog CEACAM5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2401 None 17 14 1 TRUE 0 0 NA A coding 143 429 108 536 PB.5743.1 chr10 - 2871 21 full-splice_match CUL2 ENST00000374749.7 4208 21 1 1336 no_subtype FALSE canonical NA NA 187 None 14 8 1 FALSE 0 0 NA C coding 745 2235 210 2444 PB.5743.2 chr10 - 2835 21 full-splice_match CUL2 ENST00000374751.7 4233 21 63 1335 no_subtype FALSE canonical NA NA 150 None 14 2 0 FALSE 0 0 NA C coding 745 2235 173 2407 PB.8694.3 chr16 + 2631 8 novel_not_in_catalog PLA2G15 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2275 None 52 10 0 TRUE 0 0 NA B coding 412 1236 54 1289 PB.5272.1 chr9 - 675 4 full-splice_match CCL19 ENST00000311925.6 687 4 1 11 no_subtype FALSE canonical NA NA 186 None 3 2 0 FALSE 0 0 NA A coding 98 294 138 431 PB.6739.3 chr11 + 2841 18 novel_not_in_catalog APLP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2428 None 2 11 1 TRUE 0 0 NA C coding 751 2253 102 2354 PB.486.1 chr1 + 2834 1 genic_intron novelGene_849 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6739.1 chr11 + 3522 16 full-splice_match APLP2 ENST00000528499.5 2530 16 4 -996 no_subtype FALSE canonical NA NA 2066 None 163 11 0 FALSE 0 0 NA C coding 695 2085 81 2165 PB.6739.6 chr11 + 3568 17 novel_in_catalog APLP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2106 None 3 12 0 FALSE 0 0 NA C coding 707 2121 85 2205 PB.6739.7 chr11 + 3534 17 novel_not_in_catalog APLP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2076 None 3 12 1 FALSE 0 0 NA C coding 697 2091 85 2175 PB.2749.1 chr4 - 1680 7 full-splice_match RAB28 ENST00000330852.9 1715 7 29 6 no_subtype FALSE canonical NA NA 261 None 22 4 0 FALSE 0 0 NA A coding 221 663 187 849 PB.9625.1 chr19 - 3735 22 novel_not_in_catalog POLRMT novel NA NA NA NA no_subtype TRUE non_canonical NA NA 103 None 16 5 1 TRUE 0 0 NA A coding 970 2910 777 3686 PB.10931.1 chrX - 2567 15 full-splice_match MAOB ENST00000378069.4 2566 15 -3 2 no_subtype FALSE canonical NA NA 197 None 2 3 0 FALSE 0 0 NA A coding 520 1560 152 1711 PB.9109.2 chr17 + 6378 8 novel_not_in_catalog WIPF2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4153 None 3 26 0 TRUE 0 0 NA B coding 437 1311 258 1568 PB.9997.2 chr19 + 1947 13 novel_in_catalog PLD3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1452 None 3 3 1 FALSE 0 0 NA B coding 490 1470 168 1637 PB.9997.5 chr19 + 2368 14 novel_not_in_catalog PLD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1873 None 2 5 1 FALSE 0 0 NA B coding 490 1470 589 2058 PB.5476.2 chr9 - 4338 15 novel_not_in_catalog PHF19 novel NA NA NA NA no_subtype FALSE canonical NA NA 336 None 2 22 0 FALSE 0 0 NA C coding 580 1740 352 2091 PB.9997.7 chr19 + 1954 12 incomplete-splice_match PLD3 ENST00000409587.5 2180 13 224 2 internal_fragment FALSE canonical NA NA 1458 None 2 2 0 FALSE 0 0 NA B coding 490 1470 174 1643 PB.7159.1 chr12 - 1216 4 full-splice_match UBE2N ENST00000318066.6 5186 4 295 3675 no_subtype FALSE canonical NA NA 113 None 19 4 0 FALSE 0 0 NA C coding 152 456 84 539 PB.9997.8 chr19 + 1928 12 novel_not_in_catalog PLD3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1434 None 2 5 1 TRUE 0 0 NA B coding 490 1470 150 1619 PB.4252.1 chr6 + 3220 3 full-splice_match CCR6 ENST00000400926.5 3216 3 -9 5 no_subtype FALSE canonical NA NA 323 None 29 13 0 FALSE 0 0 NA C coding 374 1122 315 1436 PB.5760.1 chr10 - 3047 2 full-splice_match C10orf25 ENST00000625168.1 3078 2 29 2 no_subtype FALSE canonical NA NA 330 None 6 10 0 FALSE 0 0 NA A coding 109 327 637 963 PB.4607.1 chr7 + 1928 3 full-splice_match DNAJB9 ENST00000249356.3 2715 3 332 455 no_subtype FALSE canonical NA NA 431 None 5 12 0 FALSE 0 0 NA A coding 223 669 215 883 PB.6311.2 chr11 - 1348 5 full-splice_match SPI1 ENST00000227163.8 1168 5 -129 -51 no_subtype FALSE canonical NA NA 212 None 38 1 1 FALSE 0 0 NA A coding 271 813 168 980 PB.151.6 chr1 - 1954 3 full-splice_match RSRP1 ENST00000431849.3 1954 3 -8 8 no_subtype FALSE canonical NA NA 146 None 4 12 0 FALSE 0 0 NA C coding 242 726 213 938 PB.151.1 chr1 - 1414 5 full-splice_match RSRP1 ENST00000243189.11 1502 5 65 23 no_subtype FALSE canonical NA NA 146 None 86 3 0 FALSE 0 0 NA C coding 290 870 213 1082 PB.6311.5 chr11 - 3275 1 novel_in_catalog RP11-750H9.5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 15 0 FALSE 0 0 NA A coding 179 537 734 1270 PB.151.3 chr1 - 2806 5 novel_in_catalog RSRP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 146 None 7 21 0 FALSE 0 0 NA C coding 242 726 213 938 PB.151.2 chr1 - 2967 4 full-splice_match RSRP1 ENST00000498238.1 2941 4 -36 10 no_subtype FALSE canonical NA NA 182 None 148 21 0 FALSE 0 0 NA C coding 242 726 249 974 PB.10268.1 chr20 - 6025 8 full-splice_match TMX4 ENST00000246024.6 6169 8 113 31 no_subtype FALSE canonical NA NA 279 None 2 34 0 FALSE 0 0 NA A coding 349 1047 104 1150 PB.3098.2 chr4 + 1462 4 genic TLR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 425 None 2 4 0 FALSE 0 0 NA B coding 210 630 205 834 PB.7525.1 chr13 - 2787 2 genic_intron novelGene_694 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 19 None 3 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9258.2 chr17 - 1595 1 incomplete-splice_match SRSF1 ENST00000582730.6 3117 3 1381 142 no_subtype FALSE canonical NA NA NA None 4 2 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5959.3 chr10 + 3191 7 full-splice_match R3HCC1L ENST00000314594.6 3198 7 5 2 no_subtype FALSE canonical NA NA 2389 None 10 1 0 FALSE 0 0 NA C coding 778 2334 121 2454 PB.9613.1 chr18 - 2857 1 antisense novelGene_RP11-862L9.3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 20 0 FALSE 0 0 NA A coding 115 345 2513 2857 PB.5959.1 chr10 + 3238 8 novel_in_catalog R3HCC1L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2436 None 7 1 0 FALSE 0 0 NA C coding 778 2334 168 2501 PB.10951.1 chrX + 1384 7 full-splice_match RBM3 ENST00000376759.7 2162 7 -7 785 no_subtype FALSE canonical NA NA 567 None 33 8 1 FALSE 0 0 NA A coding 157 471 71 541 PB.9109.3 chr17 + 5952 9 novel_not_in_catalog WIPF2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3152 None 2 27 0 TRUE 0 0 NA B coding 440 1320 257 1576 PB.6272.1 chr11 + 2563 9 full-splice_match EHF ENST00000257831.7 3150 9 -18 605 no_subtype FALSE canonical NA NA 942 None 3 7 0 FALSE 0 0 NA C coding 300 900 140 1039 PB.6272.2 chr11 + 4404 10 novel_not_in_catalog EHF novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1819 None 3 11 0 TRUE 0 0 NA C coding 300 900 140 1039 PB.6272.3 chr11 + 3263 1 genic EHF novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 12 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2667.2 chr3 + 3862 2 novel_not_in_catalog IL1RAP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1549 None 3 14 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.5675.18 chr10 + 1581 1 genic_intron novelGene_87 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 6 0 FALSE 0 0 NA A coding 53 159 189 347 PB.1763.2 chr2 - 2689 2 antisense novelGene_NABP1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 34 None 5 24 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.8007.1 chr15 + 3433 11 full-splice_match DLL4 ENST00000249749.6 3372 11 -53 -8 no_subtype FALSE canonical NA NA 2381 None 11 0 0 FALSE 0 0 NA A coding 685 2055 330 2384 PB.5780.1 chr10 - 3809 1 genic_intron novelGene_508 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1763.1 chr2 - 2643 1 antisense novelGene_NABP1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3421.1 chr5 - 3445 2 novel_not_in_catalog MCC novel NA NA NA NA no_subtype FALSE canonical NA NA 2288 None 7 39 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.311.2 chr1 + 1829 4 novel_not_in_catalog TMEM125 novel NA NA NA NA no_subtype FALSE canonical NA NA 406 None 2 9 0 FALSE 0 0 NA B coding 219 657 552 1208 PB.311.1 chr1 + 1691 3 incomplete-splice_match TMEM125 ENST00000432792.6 1850 4 144 15 internal_fragment FALSE canonical NA NA 281 None 3 9 2 FALSE 0 0 NA B coding 219 657 427 1083 PB.9414.3 chr17 - 3120 6 novel_not_in_catalog CANT1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 24 None 39 16 2 TRUE 0 0 NA B coding 401 1203 86 1288 PB.2511.4 chr3 + 2690 26 incomplete-splice_match U2SURP ENST00000473835.6 7276 28 71 4515 3prime_fragment FALSE canonical NA NA 2674 None 2 1 0 FALSE 0 0 NA B coding 890 2670 20 2689 PB.1340.8 chr2 - 2605 12 novel_not_in_catalog MTIF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 888 None 2 17 2 FALSE 0 0 NA B coding 500 1500 1105 2604 PB.10891.3 chrX - 2670 17 full-splice_match SH3KBP1 ENST00000379698.8 2678 17 -22 30 no_subtype FALSE canonical NA NA 140 None 71 2 0 FALSE 0 0 NA C coding 628 1884 90 1973 PB.10891.2 chrX - 2527 18 full-splice_match SH3KBP1 ENST00000397821.7 4731 18 97 2107 no_subtype FALSE canonical NA NA 198 None 115 0 0 FALSE 0 0 NA C coding 665 1995 195 2189 PB.10891.1 chrX - 2330 13 full-splice_match SH3KBP1 ENST00000379716.5 3819 13 79 1410 no_subtype FALSE canonical NA NA 58 None 4 5 0 FALSE 0 0 NA C coding 427 1281 47 1327 PB.1340.4 chr2 - 2581 17 novel_not_in_catalog MTIF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 144 None 2 4 1 TRUE 0 0 NA B coding 727 2181 374 2554 PB.1340.3 chr2 - 2834 16 novel_in_catalog MTIF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 413 None 4 7 0 FALSE 0 0 NA B coding 727 2181 626 2806 PB.10891.6 chrX + 3173 1 antisense novelGene_SH3KBP1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10891.5 chrX - 1508 11 incomplete-splice_match SH3KBP1 ENST00000397821.7 4731 18 -100 3323 internal_fragment FALSE canonical NA NA 395 None 4 2 0 FALSE 0 0 NA C coding 372 1116 392 1507 PB.3271.1 chr5 - 2446 14 full-splice_match PLK2 ENST00000274289.7 2960 14 419 95 no_subtype FALSE canonical NA NA 152 None 36 7 0 FALSE 0 0 NA A coding 587 1761 177 1937 PB.6490.4 chr11 - 3237 10 novel_in_catalog KMT5B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 163 None 2 7 1 FALSE 0 0 NA C coding 814 2442 217 2658 PB.6490.5 chr11 - 2670 10 full-splice_match KMT5B ENST00000405515.5 2869 10 192 7 no_subtype FALSE canonical NA NA 160 None 4 7 1 FALSE 0 0 NA C coding 393 1179 237 1415 PB.6490.2 chr11 - 3489 11 novel_in_catalog KMT5B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 179 None 25 4 1 FALSE 0 0 NA C coding 885 2655 256 2910 PB.6490.3 chr11 - 3344 11 novel_not_in_catalog KMT5B novel NA NA NA NA no_subtype FALSE canonical NA NA 102 None 2 4 1 TRUE 0 0 NA C coding 862 2586 179 2764 PB.7905.1 chr14 - 2564 1 genic_intron novelGene_900 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5919.1 chr10 - 3266 26 novel_not_in_catalog IDE novel NA NA NA NA no_subtype TRUE canonical NA NA 130 None 9 2 0 TRUE 0 0 NA A coding 1019 3057 33 3089 PB.10434.16 chr20 - 7232 14 full-splice_match ZNFX1 ENST00000396105.5 7371 14 131 8 no_subtype FALSE canonical NA NA 68 None 16 8 0 FALSE 0 0 NA C coding 1918 5754 117 5870 PB.8459.31 chr16 - 3207 2 novel_not_in_catalog MYH11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 753 None 4 20 0 TRUE 0 0 NA C coding 128 384 2399 2782 PB.1965.1 chr2 + 2760 13 novel_not_in_catalog ATG4B novel NA NA NA NA no_subtype FALSE canonical NA NA 1101 None 32 19 0 TRUE 0 0 NA B coding 319 957 216 1172 PB.1965.4 chr2 + 2969 2 novel_not_in_catalog ATG4B novel NA NA NA NA no_subtype FALSE canonical NA NA 1677 None 7 21 1 TRUE 0 0 NA B coding 125 375 1777 2151 PB.1965.5 chr2 + 1538 13 novel_not_in_catalog ATG4B novel NA NA NA NA no_subtype FALSE canonical NA NA 1101 None 2 0 0 TRUE 0 0 NA B coding 319 957 216 1172 PB.5448.1 chr9 + 1672 4 full-splice_match SLC31A2 ENST00000259392.7 1785 4 98 15 no_subtype FALSE canonical NA NA 298 None 31 6 0 FALSE 0 0 NA A coding 143 429 36 464 PB.4754.1 chr7 - 1276 3 full-splice_match TMUB1 ENST00000297533.8 1353 3 68 9 no_subtype FALSE canonical NA NA 45 None 6 1 0 FALSE 0 0 NA A coding 246 738 76 813 PB.11090.1 chrX + 5309 5 novel_not_in_catalog GPRASP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 436 None 3 8 1 FALSE 0 0 NA A coding 1395 4185 771 4955 PB.9987.2 chr19 + 3559 30 novel_in_catalog SUPT5H novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3150 None 30 2 0 FALSE 0 0 NA C coding 1087 3261 31 3291 PB.9987.3 chr19 + 3579 29 full-splice_match SUPT5H ENST00000598725.5 3742 29 155 8 no_subtype FALSE canonical NA NA 3172 None 59 3 0 FALSE 0 0 NA C coding 1087 3261 53 3313 PB.9987.1 chr19 + 3639 30 full-splice_match SUPT5H ENST00000432763.6 3710 30 69 2 no_subtype TRUE canonical NA NA 3230 None 118 1 0 FALSE 0 0 NA C coding 1087 3261 111 3371 PB.1804.1 chr2 + 3265 14 novel_not_in_catalog BMPR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2954 None 12 4 0 TRUE 0 0 NA B coding 1038 3114 89 3202 PB.1690.2 chr2 + 2854 1 genic_intron novelGene_1304 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5329.1 chr9 + 3267 21 full-splice_match PCSK5 ENST00000376752.8 5756 21 6 2483 no_subtype FALSE canonical NA NA 3097 None 4 2 1 FALSE 0 0 NA A coding 913 2739 472 3210 PB.8292.1 chr15 - 1721 1 antisense novelGene_NGRN_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6684.1 chr11 - 3223 8 novel_in_catalog SLC37A4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1530 None 9 12 0 FALSE 0 0 NA B coding 228 684 1987 2670 PB.5340.2 chr9 - 1609 2 genic_intron novelGene_757 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 105 None 3 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8023.2 chr15 - 2897 21 novel_not_in_catalog TMEM87A novel NA NA NA NA no_subtype FALSE canonical NA NA 208 None 63 5 0 TRUE 0 0 NA B coding 555 1665 65 1729 PB.8023.3 chr15 - 2836 20 novel_not_in_catalog TMEM87A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 203 None 2 15 2 TRUE 0 0 NA B coding 491 1473 192 1664 PB.8023.1 chr15 - 2856 21 novel_not_in_catalog TMEM87A novel NA NA NA NA no_subtype FALSE canonical NA NA 161 None 17 5 0 TRUE 0 0 NA B coding 556 1668 18 1685 PB.1829.1 chr2 + 3414 2 genic_intron novelGene_1393 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1642 None 2 15 1 FALSE 0 0 NA A coding 120 360 295 654 PB.8023.4 chr15 - 3165 2 novel_not_in_catalog TMEM87A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 28 None 3 27 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.569.1 chr1 + 2819 11 full-splice_match DDX20 ENST00000369702.4 4212 11 620 773 no_subtype FALSE canonical NA NA 1312 None 26 3 0 FALSE 0 0 NA A coding 824 2472 1 2472 PB.1862.1 chr2 - 1928 2 genic RP11-548H3.1 novel NA NA NA NA no_subtype FALSE canonical NA NA 218 None 2 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9125.2 chr17 + 3222 3 novel_in_catalog CNP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1525 None 3 14 0 FALSE 0 0 NA C coding 401 1203 770 1972 PB.9125.3 chr17 + 1169 1 incomplete-splice_match CNP ENST00000393888.1 2583 4 1410 5 no_subtype FALSE canonical NA NA NA None 3 1 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9125.1 chr17 + 2604 4 full-splice_match CNP ENST00000393892.7 5217 4 54 2559 no_subtype FALSE canonical NA NA 906 None 173 4 0 FALSE 0 0 NA C coding 421 1263 91 1353 PB.7220.1 chr12 - 3012 1 genic_intron novelGene_964 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A coding 102 306 432 737 PB.10703.3 chr22 - 1931 2 full-splice_match DUSP18 ENST00000334679.3 2479 2 30 518 no_subtype FALSE canonical NA NA 399 None 89 11 0 FALSE 0 0 NA C coding 188 564 477 1040 PB.1373.2 chr2 - 3709 7 full-splice_match PELI1 ENST00000358912.4 3750 7 34 7 no_subtype FALSE canonical NA NA 340 None 2 9 0 FALSE 0 0 NA C coding 418 1254 410 1663 PB.10703.7 chr22 - 2981 3 novel_not_in_catalog DUSP18 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 422 None 3 20 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.7608.52 chr14 + 1631 5 novel_not_in_catalog TRDC novel NA NA NA NA no_subtype FALSE canonical NA NA 587 None 4 2 0 FALSE 0 0 NA B coding 173 519 65 583 PB.7608.53 chr14 + 3542 1 full-splice_match TRAJ40,TRAJ39 ENST00000390498.1 63 1 -1931 -1548 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7608.50 chr14 + 1805 5 novel_not_in_catalog TRDC novel NA NA NA NA no_subtype FALSE canonical NA NA 763 None 7 3 0 FALSE 0 0 NA B coding 140 420 340 759 PB.7608.51 chr14 + 1551 5 novel_not_in_catalog TRDC novel NA NA NA NA no_subtype FALSE canonical NA NA 508 None 4 1 0 FALSE 0 0 NA B coding 140 420 85 504 PB.10007.2 chr19 + 2755 15 full-splice_match HNRNPUL1 ENST00000595018.5 2794 15 36 3 no_subtype FALSE canonical NA NA 2187 None 3 1 0 FALSE 0 0 NA C coding 756 2268 34 2301 PB.10007.3 chr19 + 2983 15 full-splice_match HNRNPUL1 ENST00000595196.5 3043 15 26 34 no_subtype FALSE canonical NA NA 2415 None 12 0 0 FALSE 0 0 NA C coding 716 2148 382 2529 PB.7608.54 chr14 + 3081 1 full-splice_match TRAJ32,TRAJ33 ENST00000390505.1 66 1 -1579 -1436 no_subtype FALSE canonical NA NA NA None 10 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10007.1 chr19 + 2819 15 full-splice_match HNRNPUL1 ENST00000352456.7 3426 15 22 585 no_subtype FALSE canonical NA NA 2254 None 2 0 0 FALSE 0 0 NA C coding 766 2298 71 2368 PB.616.1 chr1 - 1807 5 full-splice_match SEC22B ENST00000578049.3 6922 5 -6 5121 no_subtype FALSE canonical NA NA 215 None 26 7 0 FALSE 0 0 NA C coding 215 645 141 785 PB.3734.1 chr6 - 2809 2 antisense novelGene_PAK1IP1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1180 None 4 22 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5674.1 chr10 - 3297 3 novel_not_in_catalog RP11-397O4.1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1581 None 2 9 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.616.2 chr1 - 1496 1 incomplete-splice_match SEC22B ENST00000578049.3 6922 5 1109 4318 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4234.2 chr6 + 1684 6 full-splice_match WTAP ENST00000337387.4 1622 6 -63 1 no_subtype FALSE canonical NA NA 460 None 5 3 0 FALSE 0 0 NA C coding 151 453 188 640 PB.9139.9 chr17 + 3089 9 novel_not_in_catalog COASY novel NA NA NA NA no_subtype FALSE canonical NA NA 2722 None 5 5 0 TRUE 0 0 NA B coding 269 807 1976 2782 PB.10186.1 chr19 + 3013 2 novel_not_in_catalog CTC-444N24.11 novel NA NA NA NA no_subtype FALSE canonical NA NA 2765 None 13 33 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.9139.5 chr17 + 3953 20 novel_not_in_catalog ATP6V0A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2408 None 2 12 0 FALSE 0 0 NA C coding 820 2460 40 2499 PB.10374.2 chr20 + 2946 3 novel_not_in_catalog RALGAPB novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1174 None 2 12 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.10374.1 chr20 + 5575 30 novel_in_catalog RALGAPB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4547 None 2 4 0 FALSE 0 0 NA B coding 1495 4485 254 4738 PB.9139.1 chr17 + 1399 5 full-splice_match ATP6V0A1 ENST00000588629.1 1797 5 76 322 no_subtype FALSE canonical NA NA 371 None 9 2 0 FALSE 0 0 NA C coding 166 498 78 575 PB.8628.11 chr16 + 5578 8 novel_not_in_catalog NLRC5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5309 None 3 16 0 TRUE 0 0 NA B coding 720 2160 129 2288 PB.9139.3 chr17 + 4012 21 novel_not_in_catalog ATP6V0A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2472 None 39 11 1 FALSE 0 0 NA C coding 832 2496 68 2563 PB.9139.2 chr17 + 4059 21 full-splice_match ATP6V0A1 ENST00000264649.10 4110 21 40 11 no_subtype FALSE canonical NA NA 2514 None 16 10 0 FALSE 0 0 NA C coding 838 2514 92 2605 PB.1322.6 chr2 + 5590 2 novel_not_in_catalog TTC7A novel NA NA NA NA no_subtype FALSE canonical NA NA 605 None 7 18 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.1322.5 chr2 + 5771 2 genic_intron novelGene_465 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2954 None 3 29 1 FALSE 0 0 NA A coding 225 675 2736 3410 PB.1322.3 chr2 + 3428 15 incomplete-splice_match TTC7A ENST00000491786.5 3615 16 183 4 internal_fragment FALSE canonical NA NA 1576 None 3 15 0 FALSE 0 0 NA B coding 598 1794 2 1795 PB.1322.2 chr2 + 5679 3 genic_intron novelGene_464 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4614 None 3 49 2 FALSE 0 0 NA A coding 109 327 1894 2220 PB.9109.8 chr17 + 7010 1 novel_in_catalog RARA novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 48 0 FALSE 0 0 NA C coding 103 309 4111 4419 PB.915.1 chr1 + 1902 5 full-splice_match TSEN15 ENST00000361641.5 1960 5 53 5 no_subtype FALSE canonical NA NA 521 None 6 5 0 FALSE 0 0 NA A coding 171 513 27 539 PB.7922.3 chr14 - 1713 11 full-splice_match WARS ENST00000392882.6 2938 11 299 926 no_subtype FALSE canonical NA NA 63 None 266 4 1 FALSE 0 0 NA C coding 471 1413 137 1549 PB.2402.2 chr3 + 2944 3 full-splice_match ADPRH ENST00000471850.1 1499 3 281 -1726 no_subtype FALSE canonical NA NA 468 None 4 13 1 FALSE 0 0 NA C coding 250 750 131 880 PB.7430.1 chr13 + 3356 1 genic PDS5B novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 20 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7922.7 chr14 - 2618 12 novel_not_in_catalog WARS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 40 None 2 11 2 TRUE 0 0 NA C coding 471 1413 120 1532 PB.7922.4 chr14 - 2598 11 novel_not_in_catalog WARS novel NA NA NA NA no_subtype FALSE canonical NA NA 63 None 2 6 0 FALSE 0 0 NA C coding 471 1413 100 1512 PB.2855.3 chr4 + 3790 25 full-splice_match POLR2B ENST00000314595.5 3748 25 -56 14 no_subtype FALSE canonical NA NA 3534 None 71 5 0 FALSE 0 0 NA C coding 1174 3522 100 3621 PB.8381.1 chr16 + 1582 9 full-splice_match MLST8 ENST00000569417.5 1870 9 270 18 no_subtype FALSE canonical NA NA 946 None 9 10 0 FALSE 0 0 NA C coding 326 978 85 1062 PB.2855.1 chr4 + 3203 8 novel_not_in_catalog POLR2B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2944 None 7 19 0 TRUE 0 0 NA C coding 221 663 2369 3031 PB.1781.1 chr2 + 2975 2 genic MARS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2723 None 17 9 0 FALSE 0 0 NA C coding 593 1779 5 1783 PB.2855.6 chr4 + 2894 6 novel_in_catalog POLR2B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2633 None 6 16 0 FALSE 0 0 NA C coding 221 663 2058 2720 PB.2855.5 chr4 + 3452 22 novel_in_catalog POLR2B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3193 None 2 3 0 FALSE 0 0 NA C coding 1067 3201 80 3280 PB.7370.1 chr12 + 2916 5 novel_not_in_catalog PUS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2600 None 6 13 0 TRUE 0 0 NA B coding 374 1122 1524 2645 PB.7370.2 chr12 + 1511 6 novel_not_in_catalog PUS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1199 None 4 1 0 FALSE 0 0 NA B coding 399 1197 48 1244 PB.2511.1 chr3 + 4301 28 novel_in_catalog U2SURP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2968 None 20 10 0 FALSE 0 0 NA B coding 1028 3084 21 3104 PB.9653.2 chr19 - 1213 6 full-splice_match PLEKHJ1 ENST00000326631.6 1206 6 -10 3 no_subtype FALSE canonical NA NA 176 None 9 11 0 FALSE 0 0 NA A coding 149 447 83 529 PB.56.1 chr1 + 3302 3 novel_not_in_catalog UBIAD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2834 None 15 12 1 TRUE 0 0 NA C coding 338 1014 306 1319 PB.56.2 chr1 + 2804 2 full-splice_match UBIAD1 ENST00000376810.5 3646 2 21 821 no_subtype FALSE canonical NA NA 834 None 9 9 0 FALSE 0 0 NA C coding 338 1014 306 1319 PB.56.3 chr1 + 2779 4 novel_not_in_catalog UBIAD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2309 None 3 11 1 TRUE 0 0 NA C coding 139 417 378 794 PB.10462.1 chr20 + 1807 7 full-splice_match RAB22A ENST00000244040.3 8670 7 19 6844 no_subtype FALSE canonical NA NA 749 None 5 2 0 FALSE 0 0 NA A coding 194 582 263 844 PB.3963.1 chr6 - 3113 18 novel_not_in_catalog MCM3 novel NA NA NA NA no_subtype TRUE canonical NA NA 202 None 126 9 0 TRUE 0 0 NA A coding 808 2424 125 2548 PB.5832.3 chr10 - 2741 14 novel_not_in_catalog PSAP novel NA NA NA NA no_subtype FALSE canonical NA NA 70 None 3027 4 0 FALSE 0 0 NA B coding 523 1569 31 1599 PB.902.1 chr1 + 1867 6 full-splice_match MR1 ENST00000367580.5 7704 6 -24 5861 no_subtype FALSE canonical NA NA 1014 None 5 5 0 FALSE 0 0 NA A coding 341 1023 30 1052 PB.5832.7 chr10 - 1146 1 incomplete-splice_match PSAP ENST00000610929.3 1969 9 821 3 no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5832.6 chr10 - 2669 14 novel_not_in_catalog PSAP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 120 None 4 8 2 TRUE 0 0 NA B coding 269 807 81 887 PB.5494.1 chr9 - 3704 1 genic_intron novelGene_1078 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5112.1 chr8 - 1645 1 incomplete-splice_match MTSS1 ENST00000378017.7 4458 14 2813 1 no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2849.4 chr4 + 3494 19 full-splice_match EXOC1 ENST00000381295.6 3551 19 49 8 no_subtype FALSE canonical NA NA 2831 None 2 7 0 FALSE 0 0 NA C coding 894 2682 300 2981 PB.466.3 chr1 + 5472 21 full-splice_match PKN2 ENST00000370513.9 2890 21 -299 -2283 no_subtype FALSE canonical NA NA 2914 None 3 29 0 FALSE 0 0 NA C coding 936 2808 308 3115 PB.466.1 chr1 + 1601 3 novel_in_catalog PKN2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 656 None 5 10 0 FALSE 0 0 NA C coding 186 558 308 865 PB.10523.1 chr21 - 3701 13 novel_not_in_catalog TIAM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 43 None 2 15 0 TRUE 0 0 NA B coding 581 1743 8 1750 PB.8516.1 chr16 - 3139 1 antisense novelGene_IL4R_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 9 0 FALSE 0 0 NA A coding 102 306 2145 2450 PB.2849.2 chr4 + 3264 18 full-splice_match EXOC1 ENST00000349598.6 3248 18 -39 23 no_subtype FALSE canonical NA NA 2595 None 14 7 1 FALSE 0 0 NA C coding 879 2637 109 2745 PB.10523.2 chr21 - 4199 15 novel_in_catalog TIAM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 148 None 2 17 0 FALSE 0 0 NA B coding 682 2046 214 2259 PB.7897.1 chr14 - 3614 6 antisense novelGene_RP11-404P21.8_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 247 None 2 26 1 FALSE 0 0 NA A coding 105 315 2498 2812 PB.8110.1 chr15 - 2689 2 antisense novelGene_CGNL1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2562 None 2 18 1 FALSE 0 0 NA A coding 159 477 1620 2096 PB.7165.1 chr12 - 3000 17 novel_not_in_catalog CEP83 novel NA NA NA NA no_subtype FALSE canonical NA NA 279 None 2 11 1 TRUE 0 0 NA A coding 693 2079 405 2483 PB.1602.1 chr2 + 3372 9 full-splice_match CCNT2 ENST00000264157.9 6917 9 14 3531 no_subtype FALSE canonical NA NA 790 None 4 9 0 FALSE 0 0 NA A coding 730 2190 17 2206 PB.2606.1 chr3 + 1794 14 full-splice_match ACTL6A ENST00000429709.6 1901 14 97 10 no_subtype FALSE canonical NA NA 1325 None 20 3 0 FALSE 0 0 NA A coding 429 1287 117 1403 PB.11094.2 chrX - 1812 4 full-splice_match MORF4L2 ENST00000498064.1 451 4 111 -1472 no_subtype FALSE canonical NA NA 75 None 37 3 0 FALSE 0 0 NA C coding 288 864 292 1155 PB.5649.3 chr10 - 5662 6 novel_not_in_catalog LARP4B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1111 None 2 37 4 TRUE 0 0 NA B coding 104 312 4982 5293 PB.6703.4 chr11 + 6777 52 novel_not_in_catalog SORL1 novel NA NA NA NA no_subtype TRUE canonical NA NA 6588 None 91 0 0 TRUE 0 0 NA B coding 2214 6642 12 6653 PB.5649.1 chr10 - 3047 6 incomplete-splice_match LARP4B ENST00000316157.7 5642 17 1333 1262 5prime_fragment FALSE canonical NA NA 192 None 2 13 0 FALSE 0 0 NA B coding 17 51 872 922 PB.4163.2 chr6 + 1890 9 novel_not_in_catalog VTA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1608 None 3 3 1 TRUE 0 0 NA C coding 307 921 26 946 PB.7666.4 chr14 - 1426 5 novel_in_catalog NFKBIA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 332 None 2 2 0 FALSE 0 0 NA C coding 122 366 106 471 PB.1209.1 chr2 + 2734 1 incomplete-splice_match GDF7 ENST00000272224.4 9749 2 7007 9 no_subtype FALSE canonical NA NA NA None 5 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7666.1 chr14 - 1119 6 full-splice_match NFKBIA ENST00000216797.9 1558 6 -3 442 no_subtype FALSE canonical NA NA 332 None 120 2 0 FALSE 0 0 NA C coding 317 951 106 1056 PB.7666.2 chr14 - 1411 5 novel_in_catalog NFKBIA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 332 None 2 2 0 FALSE 0 0 NA C coding 197 591 106 696 PB.10458.1 chr20 + 1646 14 novel_not_in_catalog RAE1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1204 None 30 2 0 TRUE 0 0 NA A coding 368 1104 185 1288 PB.2757.2 chr4 - 4256 25 novel_in_catalog PROM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 408 None 2 15 1 FALSE 0 0 NA B coding 825 2475 621 3095 PB.2757.3 chr4 - 3904 25 novel_in_catalog PROM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 59 None 12 17 1 FALSE 0 0 NA B coding 825 2475 272 2746 PB.2025.1 chr3 - 812 4 full-splice_match MRPS25 ENST00000253686.6 4586 4 79 3695 no_subtype FALSE canonical NA NA 196 None 3 5 0 FALSE 0 0 NA A coding 173 519 63 581 PB.9611.2 chr18 + 5545 23 incomplete-splice_match ZNF236 ENST00000320610.13 7124 31 1254 325 internal_fragment FALSE canonical NA NA 4166 None 2 17 2 FALSE 0 0 NA B coding 1385 4155 134 4288 PB.2757.4 chr4 - 4104 26 novel_in_catalog PROM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 248 None 15 18 1 FALSE 0 0 NA B coding 833 2499 461 2959 PB.2238.3 chr3 + 5094 22 novel_not_in_catalog NISCH novel NA NA NA NA no_subtype FALSE canonical NA NA 3901 None 3 12 0 TRUE 0 0 NA B coding 1251 3753 757 4509 PB.230.1 chr1 - 1540 2 full-splice_match MARCKSL1 ENST00000329421.7 1699 2 149 10 no_subtype FALSE canonical NA NA 284 None 59 5 0 FALSE 0 0 NA A coding 195 585 198 782 PB.11187.1 chrX + 3108 1 genic_intron novelGene_1242 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A coding 100 300 2095 2394 PB.861.1 chr1 + 3100 10 novel_not_in_catalog FMO3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1458 None 2 18 1 FALSE 0 0 NA C coding 532 1596 203 1798 PB.6000.1 chr10 - 1766 2 antisense novelGene_WBP1L_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 19 None 2 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10876.1 chrX + 2662 15 full-splice_match MOSPD2 ENST00000380492.7 4163 15 42 1459 no_subtype FALSE canonical NA NA 1465 None 29 2 0 FALSE 0 0 NA A coding 518 1554 47 1600 PB.5333.1 chr9 + 2921 1 genic_intron novelGene_723 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.840.1 chr1 - 1660 8 novel_not_in_catalog CD247 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 189 None 89 6 0 FALSE 0 0 NA B coding 165 495 132 626 PB.323.1 chr1 + 3174 20 full-splice_match IPO13 ENST00000372343.7 3894 20 449 271 no_subtype FALSE canonical NA NA 3008 None 21 6 1 FALSE 0 0 NA A coding 963 2889 214 3102 PB.8365.1 chr16 + 3096 21 novel_not_in_catalog TELO2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2478 None 29 13 1 TRUE 0 0 NA A coding 837 2511 72 2582 PB.7358.1 chr12 + 2875 18 full-splice_match TCTN2 ENST00000303372.6 2912 18 16 21 no_subtype FALSE canonical NA NA 2096 None 4 9 1 FALSE 0 0 NA A coding 697 2091 113 2203 PB.2841.1 chr4 - 3462 5 novel_not_in_catalog LRRC66 novel NA NA NA NA no_subtype FALSE canonical NA NA 54 None 2 5 0 TRUE 0 0 NA A coding 880 2640 60 2699 PB.210.3 chr1 - 3617 2 novel_not_in_catalog SRSF4 novel NA NA NA NA no_subtype FALSE canonical NA NA 3184 None 4 23 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.210.2 chr1 - 2185 6 full-splice_match SRSF4 ENST00000373795.6 2387 6 89 113 no_subtype FALSE canonical NA NA 253 None 2 5 0 FALSE 0 0 NA C coding 494 1482 147 1628 PB.746.1 chr1 - 1929 15 novel_not_in_catalog CCT3 novel NA NA NA NA no_subtype FALSE canonical NA NA 94 None 127 1 0 FALSE 0 0 NA B coding 545 1635 64 1698 PB.1314.1 chr2 + 1502 1 genic_intron novelGene_453 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4700.1 chr7 + 2759 3 full-splice_match TMEM213 ENST00000442682.6 4167 3 42 1366 no_subtype FALSE canonical NA NA 265 None 3 12 0 FALSE 0 0 NA A coding 107 321 112 432 PB.5137.9 chr8 - 2628 8 novel_not_in_catalog ST3GAL1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 115 None 2 2 0 FALSE 0 0 NA C coding 340 1020 747 1766 PB.746.4 chr1 - 1906 15 novel_not_in_catalog CCT3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 94 None 2 8 2 TRUE 0 0 NA B coding 466 1398 282 1679 PB.5137.7 chr8 - 2838 10 full-splice_match ST3GAL1 ENST00000522652.5 2580 10 -218 -40 no_subtype FALSE canonical NA NA 375 None 10 3 0 FALSE 0 0 NA C coding 340 1020 957 1976 PB.5220.1 chr9 + 4339 25 novel_not_in_catalog KDM4C novel NA NA NA NA no_subtype TRUE canonical NA NA 3246 None 2 5 0 TRUE 0 0 NA C coding 1056 3168 253 3420 PB.5220.2 chr9 + 3614 8 full-splice_match KDM4C ENST00000489243.5 1439 8 -75 -2100 no_subtype FALSE canonical NA NA 976 None 2 17 0 FALSE 0 0 NA C coding 368 1104 194 1297 PB.5220.3 chr9 + 4364 25 novel_not_in_catalog KDM4C novel NA NA NA NA no_subtype FALSE canonical NA NA 3270 None 2 9 1 TRUE 0 0 NA C coding 1089 3267 178 3444 PB.5220.4 chr9 + 4335 28 novel_not_in_catalog KDM4C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3241 None 2 15 2 TRUE 0 0 NA C coding 1056 3168 248 3415 PB.5220.5 chr9 + 3752 22 novel_not_in_catalog KDM4C novel NA NA NA NA no_subtype FALSE canonical NA NA 2639 None 2 6 0 TRUE 0 0 NA C coding 954 2862 12 2873 PB.5641.1 chr9 - 1671 7 incomplete-splice_match NSMF ENST00000371482.5 2888 9 1209 8 5prime_fragment FALSE canonical NA NA 48 None 2 10 0 FALSE 0 0 NA A coding 124 372 136 507 PB.8579.1 chr16 + 1550 6 novel_in_catalog ITGAD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 485 None 3 7 0 FALSE 0 0 NA C coding 219 657 59 715 PB.8752.2 chr16 + 2113 3 full-splice_match TERF2IP ENST00000300086.4 2118 3 6 -1 no_subtype FALSE canonical NA NA 886 None 11 6 0 FALSE 0 0 NA C coding 395 1185 104 1288 PB.6737.1 chr11 - 6209 10 novel_not_in_catalog ARHGAP32 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 47 None 3 13 0 TRUE 0 0 NA A coding 844 2532 147 2678 PB.5113.1 chr8 + 2854 11 full-splice_match SQLE ENST00000265896.9 2961 11 101 6 no_subtype FALSE canonical NA NA 2329 None 95 10 0 FALSE 0 0 NA C coding 574 1722 798 2519 PB.5113.2 chr8 + 3031 6 novel_in_catalog SQLE novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1831 None 2 18 0 FALSE 0 0 NA C coding 372 1116 896 2011 PB.8178.1 chr15 - 1436 1 genic_intron novelGene_634 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4479.2 chr7 - 3196 2 antisense novelGene_RSBN1L_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 28 None 3 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9834.1 chr19 - 1497 2 novel_not_in_catalog BRD4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 518 None 3 9 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.1368.1 chr2 + 2951 7 novel_not_in_catalog EHBP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1349 None 4 16 2 TRUE 0 0 NA A coding 106 318 317 634 PB.3315.1 chr5 + 1605 1 incomplete-splice_match MAP1B ENST00000296755.11 12036 7 10428 4 no_subtype FALSE canonical NA NA NA None 5 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.761.1 chr1 - 2582 12 full-splice_match FCRL2 ENST00000361516.7 2579 12 -10 7 no_subtype FALSE canonical NA NA 90 None 2 2 0 FALSE 0 0 NA A coding 508 1524 60 1583 PB.3610.1 chr5 + 3193 1 full-splice_match PPP1R2P3 ENST00000522232.2 1991 1 -92 -1110 no_subtype FALSE canonical NA NA NA None 52 30 0 FALSE 0 0 NA A coding 205 615 118 732 PB.10618.4 chr22 + 3047 6 novel_not_in_catalog BCL2L13 novel NA NA NA NA no_subtype FALSE canonical NA NA 2828 None 2 23 2 TRUE 0 0 NA B coding 205 615 804 1418 PB.9286.1 chr17 - 2907 7 novel_not_in_catalog CYB561 novel NA NA NA NA no_subtype FALSE canonical NA NA 61 None 4 18 2 TRUE 0 0 NA A coding 251 753 75 827 PB.7771.3 chr14 + 2845 2 genic_intron novelGene_636 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1374 None 4 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.736.1 chr1 - 4180 22 full-splice_match ARHGEF2 ENST00000361247.8 4149 22 -35 4 no_subtype FALSE canonical NA NA 198 None 43 9 0 FALSE 0 0 NA C coding 986 2958 136 3093 PB.2909.1 chr4 - 1549 8 full-splice_match HNRNPD ENST00000353341.8 1585 8 27 9 no_subtype FALSE canonical NA NA 514 None 9 0 0 FALSE 0 0 NA C coding 306 918 282 1199 PB.10618.1 chr22 + 3040 6 novel_not_in_catalog BCL2L13 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2839 None 2 14 1 TRUE 0 0 NA B coding 323 969 461 1429 PB.10618.2 chr22 + 3112 7 novel_not_in_catalog BCL2L13 novel NA NA NA NA no_subtype FALSE canonical NA NA 2894 None 2 16 1 TRUE 0 0 NA B coding 323 969 516 1484 PB.10618.3 chr22 + 3180 8 novel_not_in_catalog BCL2L13 novel NA NA NA NA no_subtype FALSE canonical NA NA 2990 None 29 14 2 TRUE 0 0 NA B coding 485 1455 126 1580 PB.2667.8 chr3 + 3264 2 incomplete-splice_match IL1RAP ENST00000342550.6 4490 10 1219 7 internal_fragment FALSE canonical NA NA 96 None 2 16 0 FALSE 0 0 NA B coding 81 243 219 461 PB.4022.3 chr6 - 3227 11 full-splice_match SYNCRIP ENST00000616122.4 6764 11 -2 3539 no_subtype FALSE canonical NA NA 128 None 2 1 0 FALSE 0 0 NA C coding 464 1392 275 1666 PB.4708.9 chr7 + 3638 1 genic_intron novelGene_1183 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1275.8 chr2 - 2701 17 novel_not_in_catalog EIF2AK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 90 None 12 15 2 TRUE 0 0 NA B coding 262 786 274 1059 PB.4022.2 chr6 - 1480 1 incomplete-splice_match SYNCRIP ENST00000355238.10 6449 12 1975 2995 no_subtype FALSE canonical NA NA NA None 2 1 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.218.3 chr1 + 2176 12 full-splice_match TINAGL1 ENST00000271064.11 2187 12 5 6 no_subtype FALSE canonical NA NA 1334 None 3 9 0 FALSE 0 0 NA C coding 467 1401 72 1472 PB.1275.7 chr2 - 2718 18 novel_not_in_catalog EIF2AK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 16 None 4 15 1 TRUE 0 0 NA B coding 262 786 291 1076 PB.218.1 chr1 + 1763 10 novel_in_catalog TINAGL1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 923 None 2 5 0 FALSE 0 0 NA C coding 290 870 192 1061 PB.1275.5 chr2 - 4329 17 novel_not_in_catalog EIF2AK2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 23 None 2 20 1 TRUE 0 0 NA B coding 262 786 123 908 PB.8545.3 chr16 + 1861 6 novel_not_in_catalog TMEM219 novel NA NA NA NA no_subtype FALSE canonical NA NA 1768 None 5 1 0 FALSE 0 0 NA B coding 240 720 1013 1732 PB.8545.2 chr16 + 1633 1 novel_in_catalog TMEM219 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 7 4 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8545.1 chr16 + 898 7 novel_not_in_catalog TMEM219 novel NA NA NA NA no_subtype FALSE canonical NA NA 824 None 5 0 0 FALSE 0 0 NA B coding 240 720 69 788 PB.10493.2 chr20 + 3295 6 novel_not_in_catalog PCMTD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1626 None 4 22 1 TRUE 0 0 NA B coding 185 555 320 874 PB.4015.1 chr6 - 2044 13 full-splice_match PGM3 ENST00000513973.5 6107 13 22 4041 no_subtype FALSE canonical NA NA 93 None 3 2 0 FALSE 0 0 NA C coding 542 1626 96 1721 PB.3309.5 chr5 - 2848 1 novel_in_catalog NAIP novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9558.1 chr18 - 1450 3 full-splice_match IER3IP1 ENST00000256433.4 3525 3 24 2051 no_subtype FALSE canonical NA NA 164 None 6 9 0 FALSE 0 0 NA C coding 82 246 74 319 PB.3309.1 chr5 - 5733 15 full-splice_match NAIP ENST00000194097.8 6088 15 191 164 no_subtype FALSE canonical NA NA 61 None 9 8 0 FALSE 0 0 NA C coding 1403 4209 65 4273 PB.3309.2 chr5 - 5640 14 novel_in_catalog NAIP novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 61 None 3 7 0 FALSE 0 0 NA C coding 1015 3045 1147 4191 PB.10804.1 chr22 - 2120 1 genic POLDIP3 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10313.2 chr20 + 2868 19 novel_not_in_catalog TPX2 novel NA NA NA NA no_subtype TRUE canonical NA NA 2346 None 8 8 0 TRUE 0 0 NA B coding 747 2241 214 2454 PB.6949.1 chr12 + 1552 4 full-splice_match TUBA1C ENST00000301072.10 3001 4 175 1274 no_subtype FALSE canonical NA NA 475 None 44 10 0 FALSE 0 0 NA A coding 449 1347 101 1447 PB.10804.2 chr22 - 1495 9 full-splice_match POLDIP3 ENST00000252115.9 3441 9 27 1919 no_subtype FALSE canonical NA NA 137 None 123 1 0 FALSE 0 0 NA C coding 421 1263 79 1341 PB.10313.3 chr20 + 3030 16 novel_in_catalog TPX2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2205 None 2 7 0 FALSE 0 0 NA B coding 747 2241 73 2313 PB.10081.1 chr19 + 2596 7 novel_in_catalog DHX34 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1908 None 2 2 0 FALSE 0 0 NA B coding 596 1788 316 2103 PB.10081.2 chr19 + 3888 18 novel_not_in_catalog DHX34 novel NA NA NA NA no_subtype TRUE canonical NA NA 3593 None 4 5 0 TRUE 0 0 NA B coding 1143 3429 296 3724 PB.4767.2 chr7 + 2883 6 novel_in_catalog INSIG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 896 None 4 11 0 FALSE 0 0 NA C coding 277 831 93 923 PB.8848.2 chr17 - 1611 4 novel_not_in_catalog TAX1BP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 91 None 2 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8848.1 chr17 - 1301 4 full-splice_match TAX1BP3 ENST00000225525.3 1377 4 76 0 no_subtype FALSE canonical NA NA 119 None 10 7 0 FALSE 0 0 NA C coding 124 372 81 452 PB.1336.1 chr2 + 6350 28 novel_not_in_catalog SPTBN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 6324 None 6 15 2 FALSE 0 0 NA A coding 1751 5253 399 5651 PB.5208.2 chr9 + 2781 2 genic PLPP6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1515 None 2 12 0 FALSE 0 0 NA C coding 295 885 66 950 PB.10645.1 chr22 - 2522 8 novel_not_in_catalog KLHL22 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 42 None 6 5 2 TRUE 0 0 NA B coding 634 1902 79 1980 PB.9451.4 chr17 + 5475 7 novel_not_in_catalog SLC16A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5330 None 6 44 2 TRUE 0 0 NA B coding 465 1395 3598 4992 PB.7214.1 chr12 - 1723 1 intergenic novelGene_958 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3417.2 chr5 + 2724 6 novel_not_in_catalog SRP19 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2222 None 2 23 2 TRUE 0 0 NA A coding 111 333 2021 2353 PB.3417.1 chr5 + 1863 6 novel_not_in_catalog CTC-487M23.8 novel NA NA NA NA no_subtype FALSE canonical NA NA 446 None 3 9 1 TRUE 0 0 NA A coding 467 1401 447 1847 PB.5078.1 chr8 + 1617 1 genic_intron novelGene_1039 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4475.2 chr7 - 2984 31 full-splice_match GSAP ENST00000257626.11 3251 31 29 238 no_subtype FALSE canonical NA NA 159 None 14 6 0 FALSE 0 0 NA A coding 854 2562 51 2612 PB.66.1 chr1 - 1681 6 full-splice_match DHRS3 ENST00000616661.4 1722 6 37 4 no_subtype FALSE canonical NA NA 541 None 32 3 0 FALSE 0 0 NA A coding 302 906 347 1252 PB.9451.2 chr17 + 2823 5 novel_not_in_catalog SLC16A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2678 None 2 17 0 TRUE 0 0 NA B coding 488 1464 138 1601 PB.6703.3 chr11 + 7022 51 novel_not_in_catalog SORL1 novel NA NA NA NA no_subtype TRUE canonical NA NA 6592 None 2 2 0 TRUE 0 0 NA B coding 2214 6642 16 6657 PB.9451.3 chr17 + 1964 6 novel_not_in_catalog SLC16A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1800 None 25 4 0 TRUE 0 0 NA B coding 465 1395 68 1462 PB.7177.1 chr12 - 4366 16 full-splice_match CDK17 ENST00000543119.6 2442 16 -59 -1865 no_subtype FALSE canonical NA NA 554 None 3 10 0 FALSE 0 0 NA C coding 523 1569 584 2152 PB.7177.2 chr12 - 2645 17 full-splice_match CDK17 ENST00000261211.7 4157 17 -2 1514 no_subtype FALSE canonical NA NA 577 None 5 3 0 FALSE 0 0 NA C coding 523 1569 607 2175 PB.3301.4 chr5 + 2637 11 incomplete-splice_match PIK3R1 ENST00000521657.5 3891 16 1232 22 internal_fragment FALSE canonical NA NA 1317 None 13 6 0 FALSE 0 0 NA C coding 454 1362 143 1504 PB.5755.10 chr10 - 1962 2 novel_not_in_catalog HNRNPF novel NA NA NA NA no_subtype FALSE canonical NA NA 53 None 8 3 1 FALSE 0 0 NA C coding 414 1242 109 1350 PB.9806.1 chr19 + 1804 9 full-splice_match CALR ENST00000316448.9 1903 9 94 5 no_subtype FALSE canonical NA NA 1032 None 90 6 0 FALSE 0 0 NA A coding 296 888 343 1230 PB.9597.1 chr18 - 3104 12 novel_not_in_catalog VPS4B novel NA NA NA NA no_subtype TRUE canonical NA NA 168 None 201 17 1 TRUE 0 0 NA A coding 444 1332 142 1473 PB.3301.1 chr5 + 3889 16 full-splice_match PIK3R1 ENST00000521657.5 3891 16 -21 23 no_subtype TRUE canonical NA NA 2570 None 4 5 0 FALSE 0 0 NA C coding 724 2172 586 2757 PB.3301.3 chr5 + 3680 1 genic_intron novelGene_643 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7696.2 chr14 - 4414 2 antisense novelGene_RP11-286O18.1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 876 None 2 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4279.1 chr7 + 2067 1 incomplete-splice_match WIPI2 ENST00000288828.8 4476 13 2399 11 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8675.2 chr16 + 4085 23 novel_not_in_catalog FAM65A novel NA NA NA NA no_subtype FALSE canonical NA NA 3666 None 4 7 1 TRUE 0 0 NA B coding 500 1500 2262 3761 PB.11073.1 chrX - 1770 9 novel_not_in_catalog TSPAN6 novel NA NA NA NA no_subtype FALSE canonical NA NA 161 None 2 5 1 TRUE 0 0 NA A coding 245 735 75 809 PB.8840.1 chr17 - 1394 1 incomplete-splice_match METTL16 ENST00000571669.6 5606 9 3198 1015 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9615.3 chr18 - 1621 1 incomplete-splice_match MBP ENST00000397863.5 4800 4 681 2499 no_subtype FALSE canonical NA NA NA None 19 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8860.1 chr17 - 2720 16 novel_not_in_catalog ALOX15 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 37 None 12 6 2 TRUE 0 0 NA C coding 662 1986 59 2044 PB.9105.1 chr17 - 2474 8 full-splice_match NR1D1 ENST00000246672.3 2772 8 286 12 no_subtype FALSE canonical NA NA 376 None 2 1 0 FALSE 0 0 NA A coding 614 1842 346 2187 PB.7127.2 chr12 - 1853 1 novel_in_catalog KRR1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8860.2 chr17 - 2688 14 full-splice_match ALOX15 ENST00000293761.7 2677 14 -13 2 no_subtype FALSE canonical NA NA 162 None 7 3 0 FALSE 0 0 NA C coding 662 1986 28 2013 PB.4427.2 chr7 - 2906 3 novel_in_catalog ZNF680 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 166 None 3 13 0 FALSE 0 0 NA C coding 498 1494 137 1630 PB.4001.4 chr6 - 2894 23 incomplete-splice_match PHIP ENST00000275034.4 10460 40 -56 7622 internal_fragment FALSE canonical NA NA 264 None 103 0 0 FALSE 0 0 NA B coding 890 2670 225 2894 PB.4427.1 chr7 - 3007 4 full-splice_match ZNF680 ENST00000309683.10 3022 4 18 -3 no_subtype FALSE canonical NA NA 164 None 2 14 0 FALSE 0 0 NA C coding 530 1590 135 1724 PB.994.1 chr1 + 2796 4 full-splice_match TMCC2 ENST00000329800.7 2818 4 20 2 no_subtype FALSE canonical NA NA 1267 None 2 6 0 FALSE 0 0 NA A coding 469 1407 170 1576 PB.1720.1 chr2 + 1777 10 full-splice_match RBM45 ENST00000286070.9 1785 10 1 7 no_subtype FALSE canonical NA NA 1524 None 8 2 0 FALSE 0 0 NA A coding 474 1422 92 1513 PB.3890.11 chr6 + 2597 4 novel_in_catalog PI16 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2151 None 10 11 0 FALSE 0 0 NA C coding 170 510 1357 1866 PB.9396.2 chr17 + 2673 17 full-splice_match SEC14L1 ENST00000436233.8 5295 17 44 2578 no_subtype FALSE canonical NA NA 2262 None 5 5 0 FALSE 0 0 NA C coding 715 2145 221 2365 PB.553.1 chr1 - 2634 1 genic_intron novelGene_986 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2416.1 chr3 - 3247 13 novel_not_in_catalog GOLGB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 109 None 6 0 0 FALSE 0 0 NA B coding 1045 3135 112 3246 PB.962.1 chr1 + 3920 1 genic_intron novelGene_1378 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 21 0 FALSE 0 0 NA A coding 169 507 1937 2443 PB.6462.2 chr11 + 2640 18 full-splice_match DPP3 ENST00000532677.5 3078 18 428 10 no_subtype FALSE canonical NA NA 2071 None 54 3 0 FALSE 0 0 NA A coding 737 2211 31 2241 PB.2264.1 chr3 + 5400 23 novel_not_in_catalog SLMAP novel NA NA NA NA no_subtype FALSE canonical NA NA 3532 None 2 11 0 TRUE 0 0 NA C coding 787 2361 1163 3523 PB.2264.3 chr3 + 3091 11 full-splice_match SLMAP ENST00000417128.5 3066 11 14 -39 no_subtype FALSE canonical NA NA 1221 None 54 6 0 FALSE 0 0 NA C coding 359 1077 136 1212 PB.2264.2 chr3 + 2986 10 incomplete-splice_match SLMAP ENST00000295952.7 4420 21 1432 2 internal_fragment FALSE canonical NA NA 1116 None 34 6 0 FALSE 0 0 NA C coding 362 1086 121 1206 PB.8567.3 chr16 + 2103 2 full-splice_match ORAI3 ENST00000318663.4 2206 2 98 5 no_subtype FALSE canonical NA NA 354 None 3 9 0 FALSE 0 0 NA C coding 295 885 127 1011 PB.8567.2 chr16 + 2448 1 novel_in_catalog ORAI3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 13 0 FALSE 0 0 NA C coding 100 300 32 331 PB.7571.1 chr13 + 6265 49 novel_not_in_catalog COL4A2 novel NA NA NA NA no_subtype TRUE canonical NA NA 5169 None 8 13 2 TRUE 0 0 NA A coding 1712 5136 289 5424 PB.2264.6 chr3 + 2985 10 novel_not_in_catalog SLMAP novel NA NA NA NA no_subtype FALSE canonical NA NA 1114 None 6 6 0 FALSE 0 0 NA C coding 362 1086 119 1204 PB.58.4 chr1 - 2695 12 full-splice_match MTHFR ENST00000376590.7 6232 12 113 3424 no_subtype FALSE canonical NA NA 58 None 8 2 0 FALSE 0 0 NA C coding 656 1968 72 2039 PB.58.5 chr1 - 2768 12 full-splice_match MTHFR ENST00000376583.7 7044 12 -23 4299 no_subtype FALSE canonical NA NA 133 None 7 4 0 FALSE 0 0 NA C coding 697 2091 24 2114 PB.58.2 chr1 - 2968 1 incomplete-splice_match MTHFR ENST00000376583.7 7044 12 3752 325 no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA C coding 127 381 784 1164 PB.58.1 chr1 - 6668 13 novel_not_in_catalog MTHFR novel NA NA NA NA no_subtype FALSE non_canonical NA NA 75 None 4 22 1 TRUE 0 0 NA C coding 656 1968 89 2056 PB.468.4 chr1 - 2009 1 incomplete-splice_match RBMXL1 ENST00000321792.5 4799 2 284 2507 no_subtype FALSE canonical NA NA NA None 20 8 0 FALSE 0 0 NA C coding 390 1170 146 1315 PB.468.5 chr1 - 1597 3 full-splice_match RBMXL1 ENST00000413769.1 991 3 133 -739 no_subtype FALSE canonical NA NA 42 None 6 3 0 FALSE 0 0 NA C coding 390 1170 383 1552 PB.468.1 chr1 - 1806 14 full-splice_match KYAT3 ENST00000260508.8 2070 14 295 -31 no_subtype FALSE canonical NA NA 42 None 4 5 0 FALSE 0 0 NA A coding 454 1362 44 1405 PB.6446.1 chr11 + 3084 14 novel_in_catalog MUS81 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2632 None 3 12 1 FALSE 0 0 NA A coding 268 804 1404 2207 PB.468.3 chr1 - 3884 4 novel_not_in_catalog RBMXL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 185 None 2 23 1 TRUE 0 0 NA C coding 390 1170 526 1695 PB.2416.2 chr3 - 3080 12 novel_not_in_catalog GOLGB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 110 None 7 1 0 FALSE 0 0 NA B coding 989 2967 113 3079 PB.2204.1 chr3 + 3786 21 novel_not_in_catalog RBM6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3546 None 7 2 0 FALSE 0 0 NA A coding 1123 3369 301 3669 PB.5864.1 chr10 - 2004 1 genic_intron novelGene_726 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6170.1 chr11 - 3029 3 antisense novelGene_RP11-304C12.3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1648 None 6 11 1 FALSE 0 0 NA A coding 141 423 2311 2733 PB.4529.1 chr7 + 1556 10 full-splice_match ARPC1A ENST00000262942.9 1565 10 12 -3 no_subtype TRUE canonical NA NA 1186 None 68 2 0 FALSE 0 0 NA C coding 370 1110 113 1222 PB.8607.1 chr16 - 2947 1 genic_intron novelGene_522 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5453.1 chr9 + 2651 14 full-splice_match PRPF4 ENST00000374199.8 3212 14 368 193 no_subtype FALSE canonical NA NA 1405 None 32 13 1 FALSE 0 0 NA A coding 521 1563 34 1596 PB.8251.1 chr15 - 1182 3 full-splice_match MESDC2 ENST00000261758.5 4264 3 84 2998 no_subtype FALSE canonical NA NA 216 None 21 2 0 FALSE 0 0 NA A coding 234 702 4 705 PB.4148.6 chr6 - 3547 14 novel_not_in_catalog BCLAF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 98 None 2 8 2 TRUE 0 0 NA C coding 740 2220 213 2432 PB.4148.7 chr6 - 3153 14 novel_in_catalog BCLAF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 74 None 2 4 0 FALSE 0 0 NA C coding 579 1737 189 1925 PB.4148.4 chr6 - 3429 12 novel_not_in_catalog BCLAF1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 134 None 5 6 1 FALSE 0 0 NA C coding 800 2400 249 2648 PB.10630.1 chr22 - 1378 1 full-splice_match CLDN5 ENST00000618236.1 1374 1 -7 3 no_subtype FALSE canonical NA NA NA None 136 9 0 FALSE 0 0 NA A coding 218 654 153 806 PB.8969.1 chr17 - 1784 1 antisense novelGene_TVP23B_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4148.3 chr6 - 3418 12 full-splice_match BCLAF1 ENST00000527536.5 5371 12 -17 1970 no_subtype FALSE canonical NA NA 134 None 19 4 0 FALSE 0 0 NA C coding 871 2613 249 2861 PB.11134.1 chrX + 2850 2 full-splice_match ZBTB33 ENST00000326624.2 5211 2 102 2259 no_subtype FALSE canonical NA NA 124 None 13 3 0 FALSE 0 0 NA C coding 672 2016 127 2142 PB.11087.1 chrX - 2854 6 novel_not_in_catalog ARMCX2 novel NA NA NA NA no_subtype FALSE canonical NA NA 93 None 20 3 1 FALSE 0 0 NA B coding 632 1896 560 2455 PB.7759.1 chr14 + 5781 16 novel_in_catalog PLEKHG3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4419 None 2 4 0 FALSE 0 0 NA B coding 724 2172 2967 5138 PB.9423.1 chr17 - 2601 10 novel_not_in_catalog SGSH novel NA NA NA NA no_subtype TRUE non_canonical NA NA 145 None 40 9 1 TRUE 0 0 NA A coding 502 1506 58 1563 PB.4148.8 chr6 - 3165 13 full-splice_match BCLAF1 ENST00000531224.5 7263 13 53 4045 no_subtype FALSE canonical NA NA 86 None 31 3 0 FALSE 0 0 NA C coding 920 2760 201 2960 PB.4148.9 chr6 - 2997 13 full-splice_match BCLAF1 ENST00000530767.5 4186 13 -13 1202 no_subtype FALSE canonical NA NA 82 None 14 5 0 FALSE 0 0 NA C coding 747 2241 197 2437 PB.7424.1 chr13 + 5722 32 novel_not_in_catalog FRY novel NA NA NA NA no_subtype TRUE canonical NA NA 4856 None 2 4 0 TRUE 0 0 NA B coding 1685 5055 58 5112 PB.592.12 chr1 - 2722 18 full-splice_match CSDE1 ENST00000530886.5 3459 18 44 693 no_subtype FALSE canonical NA NA 59 None 7 7 1 FALSE 0 0 NA C coding 668 2004 545 2548 PB.664.1 chr1 - 2938 8 full-splice_match CTSK ENST00000271651.7 1692 8 -1288 42 no_subtype FALSE canonical NA NA 1398 None 109 5 0 FALSE 0 0 NA C coding 329 987 1400 2386 PB.10097.1 chr19 + 2256 13 full-splice_match NUCB1 ENST00000405315.8 2668 13 305 107 no_subtype FALSE canonical NA NA 1308 None 11 7 0 FALSE 0 0 NA A coding 461 1383 30 1412 PB.7424.5 chr13 + 2964 11 incomplete-splice_match FRY ENST00000380250.7 10688 62 7741 -17 internal_fragment FALSE canonical NA NA 1535 None 13 1 0 FALSE 0 0 NA B coding 568 1704 88 1791 PB.10765.2 chr22 - 1498 4 full-splice_match DNAL4 ENST00000216068.8 1504 4 -7 13 no_subtype FALSE canonical NA NA 113 None 13 5 0 FALSE 0 0 NA A coding 105 315 253 567 PB.2999.3 chr4 - 2028 1 genic_intron novelGene_971 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7877.4 chr14 - 3148 15 novel_not_in_catalog ITPK1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 29 None 2 12 3 TRUE 0 0 NA B coding 406 1218 238 1455 PB.2296.1 chr3 + 2872 2 novel_not_in_catalog ARL6IP5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 932 None 7 12 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.5397.4 chr9 + 2873 1 novel_in_catalog NANS novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9324.1 chr17 + 3165 12 full-splice_match ARSG ENST00000448504.6 4642 12 16 1461 no_subtype FALSE canonical NA NA 2083 None 7 8 0 FALSE 0 0 NA A coding 525 1575 781 2355 PB.8577.1 chr16 + 3944 24 incomplete-splice_match ITGAM ENST00000287497.12 3595 30 757 -1106 internal_fragment FALSE canonical NA NA 2705 None 2 17 0 FALSE 0 0 NA A coding 803 2409 366 2774 PB.2045.2 chr3 + 3268 1 novel_in_catalog RAB5A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 27 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6418.2 chr11 + 2784 13 novel_in_catalog PPP2R5B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2010 None 11 7 0 FALSE 0 0 NA C coding 321 963 596 1558 PB.1577.5 chr2 - 1717 5 incomplete-splice_match IWS1 ENST00000295321.8 2958 14 -13 1254 internal_fragment FALSE canonical NA NA 307 None 3 2 0 FALSE 0 0 NA C coding 481 1443 274 1716 PB.6418.1 chr11 + 2709 14 full-splice_match PPP2R5B ENST00000164133.6 2745 14 33 3 no_subtype FALSE canonical NA NA 1935 None 19 6 0 FALSE 0 0 NA C coding 497 1491 590 2080 PB.8914.1 chr17 - 4629 23 novel_in_catalog PER1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 23 None 2 24 2 FALSE 0 0 NA B coding 1290 3870 163 4032 PB.8914.3 chr17 - 3161 17 novel_in_catalog PER1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 46 None 2 7 0 FALSE 0 0 NA B coding 815 2445 186 2630 PB.2920.1 chr4 - 1506 7 full-splice_match COQ2 ENST00000311469.8 1641 7 124 11 no_subtype FALSE canonical NA NA 279 None 3 5 0 FALSE 0 0 NA A coding 371 1113 27 1139 PB.4132.1 chr6 + 2643 2 genic_intron novelGene_1147 novel NA NA NA NA no_subtype FALSE canonical NA NA 2625 None 2 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8914.4 chr17 - 2841 1 novel_in_catalog PER1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 33 16 0 FALSE 0 0 NA B coding 158 474 1798 2271 PB.10352.6 chr20 - 2842 18 full-splice_match RBM39 ENST00000403542.6 2883 18 38 3 no_subtype FALSE canonical NA NA 296 None 13 17 2 FALSE 0 0 NA C coding 373 1119 854 1972 PB.10352.5 chr20 - 2850 18 full-splice_match RBM39 ENST00000444878.5 2124 18 -12 -714 no_subtype FALSE canonical NA NA 320 None 4 6 0 FALSE 0 0 NA C coding 367 1101 878 1978 PB.10352.4 chr20 - 2903 19 novel_in_catalog RBM39 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 320 None 2 7 1 FALSE 0 0 NA C coding 266 798 878 1675 PB.10352.3 chr20 - 2704 16 full-splice_match RBM39 ENST00000528062.7 2421 16 2 -285 no_subtype FALSE canonical NA NA 296 None 14 6 0 FALSE 0 0 NA C coding 508 1524 310 1833 PB.10352.2 chr20 - 2738 18 novel_not_in_catalog RBM39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 281 None 3 11 2 TRUE 0 0 NA C coding 507 1521 345 1865 PB.10352.1 chr20 - 2078 17 full-splice_match RBM39 ENST00000253363.10 2488 17 -309 719 no_subtype FALSE canonical NA NA 320 None 73 4 0 FALSE 0 0 NA C coding 530 1590 334 1923 PB.9824.28 chr19 + 2981 18 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2357 None 12 11 2 TRUE 0 0 NA C coding 768 2304 81 2384 PB.6478.8 chr11 + 1716 10 novel_not_in_catalog TBC1D10C novel NA NA NA NA no_subtype FALSE canonical NA NA 1036 None 2 1 0 FALSE 0 0 NA C coding 446 1338 44 1381 PB.4393.1 chr7 - 1540 1 novel_in_catalog COA1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7292.1 chr12 - 2625 12 full-splice_match FBXO21 ENST00000622495.4 6040 12 60 3355 no_subtype FALSE canonical NA NA 254 None 66 2 0 FALSE 0 0 NA C coding 621 1863 16 1878 PB.2223.1 chr3 - 1473 2 antisense novelGene_RAD54L2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1427 None 2 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10352.9 chr20 - 2680 16 novel_in_catalog RBM39 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 296 None 14 6 0 FALSE 0 0 NA C coding 502 1506 310 1815 PB.10352.8 chr20 - 2742 17 full-splice_match RBM39 ENST00000361162.10 2831 17 64 25 no_subtype FALSE canonical NA NA 308 None 63 6 0 FALSE 0 0 NA C coding 524 1572 322 1893 PB.1452.1 chr2 + 2175 14 novel_not_in_catalog USP39 novel NA NA NA NA no_subtype TRUE canonical NA NA 1658 None 12 3 0 TRUE 0 0 NA A coding 565 1695 9 1703 PB.2174.2 chr3 - 2733 8 novel_in_catalog UQCRC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 78 None 3 6 0 FALSE 0 0 NA C coding 368 1104 10 1113 PB.9579.2 chr18 + 2969 1 genic_intron novelGene_560 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 19 0 FALSE 0 0 NA A coding 145 435 216 650 PB.1055.1 chr1 + 1717 1 genic_intron novelGene_1401 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.84.1 chr1 - 3938 17 full-splice_match EPHA2 ENST00000358432.7 3964 17 18 8 no_subtype FALSE canonical NA NA 222 None 5 17 0 FALSE 0 0 NA A coding 976 2928 138 3065 PB.8085.3 chr15 + 3227 2 novel_in_catalog TMOD3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 144 None 6 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5421.1 chr9 + 2666 7 novel_not_in_catalog TMEM38B novel NA NA NA NA no_subtype FALSE canonical NA NA 719 None 40 17 0 TRUE 0 0 NA A coding 261 783 150 932 PB.8085.1 chr15 + 1531 10 full-splice_match TMOD3 ENST00000308580.11 8255 10 57 6667 no_subtype FALSE canonical NA NA 1248 None 21 4 1 FALSE 0 0 NA C coding 352 1056 225 1280 PB.8085.6 chr15 + 1613 1 genic_intron novelGene_517 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8085.5 chr15 + 4251 9 novel_in_catalog TMOD3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1100 None 2 28 0 FALSE 0 0 NA C coding 352 1056 77 1132 PB.1690.1 chr2 + 2889 2 genic_intron novelGene_1304 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 27 None 8 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9199.4 chr17 - 3563 2 genic SCRN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1862 None 3 6 0 TRUE 0 0 NA B coding 121 363 3017 3379 PB.9199.3 chr17 - 1520 8 novel_in_catalog SCRN2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 92 None 30 2 0 FALSE 0 0 NA B coding 425 1275 93 1367 PB.9199.2 chr17 - 2768 6 novel_not_in_catalog SCRN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 92 None 4 4 0 TRUE 0 0 NA B coding 202 606 1595 2200 PB.9396.7 chr17 + 1625 1 novel_in_catalog SEC14L1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 7 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4971.1 chr8 - 1230 7 full-splice_match RPL7 ENST00000352983.6 1101 7 266 -395 no_subtype FALSE canonical NA NA 34 None 2 9 1 FALSE 0 0 NA A coding 248 744 21 764 PB.1950.1 chr2 - 3376 3 genic_intron novelGene_1419 novel NA NA NA NA no_subtype TRUE canonical NA NA 1335 None 3 21 1 FALSE 0 0 NA A coding 116 348 2095 2442 PB.11239.2 KI270727.1 - 2563 1 genic AC136352.3 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A coding 249 747 60 806 PB.3236.1 chr5 - 2615 13 novel_not_in_catalog C5orf34 novel NA NA NA NA no_subtype TRUE canonical NA NA 468 None 2 9 0 FALSE 0 0 NA A coding 638 1914 505 2418 PB.7163.10 chr12 + 3761 14 novel_not_in_catalog PLXNC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1306 None 4 17 0 TRUE 0 0 NA B coding 307 921 488 1408 PB.8.1 chr1 + 2065 3 full-splice_match CPTP ENST00000343938.8 2190 3 100 25 no_subtype FALSE canonical NA NA 433 None 7 10 0 FALSE 0 0 NA A coding 214 642 312 953 PB.7163.12 chr12 + 6428 5 novel_in_catalog PLXNC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2760 None 2 44 0 FALSE 0 0 NA B coding 118 354 17 370 PB.8061.1 chr15 + 1548 6 novel_not_in_catalog BLOC1S6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1015 None 5 6 1 TRUE 0 0 NA B coding 172 516 20 535 PB.4197.2 chr6 - 3095 3 novel_not_in_catalog ZBTB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 137 None 2 8 0 FALSE 0 0 NA C coding 514 1542 150 1691 PB.10584.1 chr21 + 1892 2 novel_not_in_catalog PKNOX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1699 None 2 16 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.3395.1 chr5 - 1588 8 incomplete-splice_match CHD1 ENST00000614616.4 8095 36 25 6482 internal_fragment FALSE canonical NA NA 394 None 3 4 0 FALSE 0 0 NA A coding 348 1044 543 1586 PB.9316.1 chr17 - 3632 12 novel_not_in_catalog PSMD12 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 198 None 3 23 1 TRUE 0 0 NA C coding 456 1368 91 1458 PB.9396.4 chr17 + 4351 17 novel_not_in_catalog SEC14L1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3688 None 2 22 3 TRUE 0 0 NA C coding 567 1701 319 2019 PB.6247.1 chr11 + 2816 4 novel_not_in_catalog METTL15 novel NA NA NA NA no_subtype FALSE canonical NA NA 599 None 2 10 0 FALSE 0 0 NA A coding 136 408 330 737 PB.9316.4 chr17 - 1528 11 full-splice_match PSMD12 ENST00000356126.7 4406 11 0 2878 no_subtype FALSE canonical NA NA 216 None 31 1 0 FALSE 0 0 NA C coding 456 1368 109 1476 PB.1567.3 chr2 + 2703 4 incomplete-splice_match RALB ENST00000420510.5 1252 5 178 -1629 internal_fragment FALSE canonical NA NA 549 None 7 9 0 FALSE 0 0 NA C coding 206 618 49 666 PB.5028.2 chr8 + 3076 15 novel_not_in_catalog PTDSS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1214 None 6 9 0 TRUE 0 0 NA B coding 420 1260 62 1321 PB.896.1 chr1 + 3044 4 incomplete-splice_match CEP350 ENST00000496440.1 765 5 255 -2534 internal_fragment FALSE canonical NA NA 475 None 2 10 0 FALSE 0 0 NA A coding 119 357 281 637 PB.4197.1 chr6 - 3109 3 full-splice_match ZBTB2 ENST00000325144.4 3090 3 -22 3 no_subtype FALSE canonical NA NA 151 None 20 7 0 FALSE 0 0 NA C coding 514 1542 164 1705 PB.3618.3 chr5 - 5389 14 novel_not_in_catalog ADAM19 novel NA NA NA NA no_subtype FALSE canonical NA NA 139 None 2 23 1 TRUE 0 0 NA B coding 576 1728 36 1763 PB.6631.2 chr11 - 4278 17 incomplete-splice_match NPAT ENST00000278612.8 6117 18 13 1826 internal_fragment FALSE canonical NA NA 130 None 4 2 0 FALSE 0 0 NA A coding 1395 4185 94 4278 PB.3618.2 chr5 - 6460 25 novel_not_in_catalog ADAM19 novel NA NA NA NA no_subtype TRUE canonical NA NA 173 None 45 24 1 TRUE 0 0 NA B coding 918 2754 80 2833 PB.4227.8 chr6 + 5585 15 novel_not_in_catalog SYTL3 novel NA NA NA NA no_subtype FALSE canonical NA NA 5214 None 2 41 3 TRUE 0 0 NA B coding 384 1152 472 1623 PB.2688.3 chr3 + 2456 3 full-splice_match NRROS ENST00000328557.4 2564 3 104 4 no_subtype FALSE canonical NA NA 207 None 46 9 0 FALSE 0 0 NA C coding 692 2076 100 2175 PB.5028.1 chr8 + 2459 14 novel_not_in_catalog PTDSS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1388 None 2 6 0 TRUE 0 0 NA B coding 450 1350 146 1495 PB.7292.2 chr12 - 2870 12 full-splice_match FBXO21 ENST00000330622.9 2906 12 -11 47 no_subtype FALSE canonical NA NA 250 None 33 5 0 FALSE 0 0 NA C coding 628 1884 12 1895 PB.4555.1 chr7 + 2557 14 novel_not_in_catalog AGFG2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1502 None 4 12 2 TRUE 0 0 NA A coding 492 1476 84 1559 PB.4227.3 chr6 + 5810 17 novel_not_in_catalog SYTL3 novel NA NA NA NA no_subtype FALSE canonical NA NA 5439 None 3 44 1 TRUE 0 0 NA B coding 452 1356 493 1848 PB.4227.4 chr6 + 2689 19 novel_not_in_catalog SYTL3 novel NA NA NA NA no_subtype TRUE canonical NA NA 2318 None 5 7 1 TRUE 0 0 NA B coding 610 1830 596 2425 PB.8646.2 chr16 + 2610 21 novel_not_in_catalog KATNB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2182 None 3 5 0 TRUE 0 0 NA B coding 672 2016 297 2312 PB.8646.1 chr16 + 2593 21 novel_not_in_catalog KATNB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2165 None 14 5 0 TRUE 0 0 NA B coding 655 1965 331 2295 PB.4227.7 chr6 + 2568 18 novel_not_in_catalog SYTL3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2197 None 8 8 1 TRUE 0 0 NA B coding 609 1827 478 2304 PB.3098.6 chr4 + 3119 1 antisense novelGene_RNF175_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 25 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.429.2 chr1 + 935 2 novel_in_catalog SRSF11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 362 None 4 4 0 FALSE 0 0 NA B coding 117 351 160 510 PB.3996.2 chr6 + 3224 1 genic_intron novelGene_703 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1604.2 chr2 + 2982 1 genic_intron novelGene_1162 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.466.6 chr1 - 2824 2 genic_intron novelGene_805 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 193 None 4 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3996.1 chr6 - 3711 7 full-splice_match TMEM30A ENST00000230461.10 4594 7 183 700 no_subtype TRUE canonical NA NA 384 None 3 14 0 FALSE 0 0 NA C coding 361 1083 148 1230 PB.6776.1 chr12 - 5956 34 novel_not_in_catalog VWF novel NA NA NA NA no_subtype TRUE canonical NA NA 66 None 3 3 0 TRUE 0 0 NA A coding 1867 5601 220 5820 PB.2688.6 chr3 + 5775 2 novel_in_catalog NRROS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3530 None 2 40 0 FALSE 0 0 NA C coding 692 2076 3423 5498 PB.3113.1 chr4 + 6191 21 novel_in_catalog RAPGEF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4159 None 2 8 0 FALSE 0 0 NA A coding 1394 4182 1 4182 PB.587.1 chr1 + 1748 3 full-splice_match OLFML3 ENST00000320334.4 1780 3 25 7 no_subtype FALSE canonical NA NA 449 None 10 2 0 FALSE 0 0 NA A coding 406 1218 50 1267 PB.10227.10 chr20 - 3115 1 novel_in_catalog SIRPB2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 7 0 FALSE 0 0 NA C coding 129 387 1301 1687 PB.10227.11 chr20 - 5455 2 full-splice_match SIRPB2 ENST00000609796.1 1111 2 33 -4377 no_subtype FALSE canonical NA NA 146 None 2 14 0 FALSE 0 0 NA C coding 239 717 1547 2263 PB.2345.1 chr3 - 1645 2 antisense novelGene_TRMT10C_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1520 None 6 7 1 FALSE 0 0 NA A coding 160 480 881 1360 PB.5176.2 chr8 - 4401 38 novel_not_in_catalog CPSF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 29 None 2 11 1 TRUE 0 0 NA C coding 1340 4020 44 4063 PB.1604.1 chr2 + 4135 24 full-splice_match RAB3GAP1 ENST00000264158.12 4914 24 32 747 no_subtype FALSE canonical NA NA 2720 None 24 6 0 FALSE 0 0 NA A coding 981 2943 12 2954 PB.3575.1 chr5 + 5272 20 full-splice_match HMGXB3 ENST00000502717.5 4974 20 1 -299 no_subtype TRUE canonical NA NA 3874 None 2 11 1 FALSE 0 0 NA A coding 1292 3876 464 4339 PB.1959.3 chr2 + 3205 27 novel_not_in_catalog ANO7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2599 None 2 7 2 TRUE 0 0 NA B coding 527 1581 1027 2607 PB.966.1 chr1 + 3097 6 novel_in_catalog PPP1R12B novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1124 None 10 12 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.10227.8 chr20 - 1647 5 full-splice_match SIRPB2 ENST00000359801.7 2642 5 -63 1058 no_subtype FALSE canonical NA NA 185 None 10 3 0 FALSE 0 0 NA C coding 342 1026 101 1126 PB.9239.1 chr17 - 2226 2 full-splice_match TOB1 ENST00000499247.2 2229 2 -11 14 no_subtype FALSE canonical NA NA 299 None 8 21 0 FALSE 0 0 NA A coding 345 1035 446 1480 PB.11106.5 chrX + 2559 1 incomplete-splice_match TMEM164 ENST00000372072.7 4975 6 2293 124 no_subtype FALSE canonical NA NA NA None 16 7 0 FALSE 0 0 NA C coding 137 411 1275 1685 PB.10227.7 chr20 - 2943 7 novel_in_catalog NSFL1C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 125 None 8 18 0 FALSE 0 0 NA B coding 262 786 21 806 PB.8975.2 chr17 + 2908 7 novel_not_in_catalog MAPK7 novel NA NA NA NA no_subtype FALSE canonical NA NA 2449 None 12 7 1 FALSE 0 0 NA B coding 816 2448 153 2600 PB.11106.3 chrX + 2725 1 genic_intron novelGene_983 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 14 0 FALSE 0 0 NA A coding 100 300 1816 2115 PB.8975.1 chr17 + 2877 7 novel_in_catalog MAPK7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2425 None 2 5 0 FALSE 0 0 NA B coding 816 2448 129 2576 PB.10664.1 chr22 + 1639 10 novel_not_in_catalog SMARCB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1276 None 76 2 0 TRUE 0 0 NA B coding 376 1128 186 1313 PB.10664.3 chr22 + 1655 10 novel_not_in_catalog SMARCB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1292 None 10 3 0 TRUE 0 0 NA B coding 385 1155 175 1329 PB.10664.2 chr22 + 1666 10 novel_not_in_catalog SMARCB1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1308 None 7 2 0 TRUE 0 0 NA B coding 311 933 413 1345 PB.10664.4 chr22 + 3051 8 novel_not_in_catalog SMARCB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1731 None 2 13 0 TRUE 0 0 NA B coding 287 861 173 1033 PB.3229.2 chr5 + 1478 7 full-splice_match FBXO4 ENST00000281623.7 1682 7 28 176 no_subtype FALSE canonical NA NA 1102 None 9 2 0 FALSE 0 0 NA C coding 387 1161 29 1189 PB.1392.10 chr2 + 1620 2 novel_in_catalog ARHGAP25 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 496 None 2 7 0 FALSE 0 0 NA B coding 121 363 314 676 PB.5708.2 chr10 + 2122 2 genic_intron novelGene_213 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 907 None 2 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5708.1 chr10 + 5775 4 antisense novelGene_PIP4K2A_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5743 None 6 38 3 FALSE 0 0 NA A coding 128 384 1050 1433 PB.1392.13 chr2 + 2632 1 genic_intron novelGene_653 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7027.1 chr12 + 1371 3 novel_not_in_catalog RPS26 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1270 None 3 13 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.5991.2 chr10 - 1339 9 novel_not_in_catalog CUEDC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 73 None 2 2 0 TRUE 0 0 NA B coding 169 507 84 590 PB.1885.4 chr2 + 3146 19 novel_not_in_catalog ACSL3 novel NA NA NA NA no_subtype TRUE canonical NA NA 2425 None 2 10 2 TRUE 0 0 NA C coding 709 2127 454 2580 PB.6968.1 chr12 - 2929 4 antisense novelGene_LARP4_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2650 None 12 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1484.1 chr2 + 2733 18 full-splice_match NCAPH ENST00000240423.8 2763 18 22 8 no_subtype FALSE canonical NA NA 2187 None 12 2 0 FALSE 0 0 NA A coding 741 2223 22 2244 PB.7461.1 chr13 - 2860 19 novel_not_in_catalog ENOX1 novel NA NA NA NA no_subtype TRUE canonical NA NA 225 None 4 1 0 TRUE 0 0 NA A coding 642 1926 510 2435 PB.10450.1 chr20 + 1594 1 genic_intron novelGene_526 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9225.1 chr17 - 1829 1 novel_in_catalog FAM117A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 1 0 FALSE 0 0 NA B coding 110 330 578 907 PB.9225.2 chr17 - 2821 2 novel_in_catalog FAM117A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1156 None 2 12 0 FALSE 0 0 NA B coding 141 423 971 1393 PB.5728.4 chr10 + 2512 8 novel_in_catalog MAP3K8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1389 None 2 10 0 FALSE 0 0 NA C coding 467 1401 117 1517 PB.5728.1 chr10 + 2674 8 full-splice_match MAP3K8 ENST00000542547.5 2782 8 104 4 no_subtype FALSE canonical NA NA 1550 None 7 9 0 FALSE 0 0 NA C coding 438 1314 365 1678 PB.6523.2 chr11 + 2439 15 novel_not_in_catalog PPME1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1231 None 7 3 0 TRUE 0 0 NA C coding 356 1068 180 1247 PB.2325.1 chr3 - 3021 2 novel_not_in_catalog DHFRL1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 187 None 5 26 1 FALSE 0 0 NA A coding 173 519 301 819 PB.987.1 chr1 + 3752 1 genic_intron novelGene_1382 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6752.1 chr11 + 2844 20 novel_not_in_catalog GLB1L2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2688 None 3 10 1 TRUE 0 0 NA B coding 636 1908 35 1942 PB.157.1 chr1 + 3455 2 genic_intron novelGene_248 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 720 None 2 24 1 FALSE 0 0 NA A coding 183 549 579 1127 PB.3899.1 chr6 + 2841 4 novel_not_in_catalog ZFAND3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 459 None 2 10 0 TRUE 0 0 NA B coding 112 336 276 611 PB.3899.2 chr6 + 5908 2 genic_intron novelGene_374 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4114 None 2 47 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3899.4 chr6 + 2690 4 novel_not_in_catalog ZFAND3 novel NA NA NA NA no_subtype TRUE canonical NA NA 307 None 3 13 0 TRUE 0 0 NA B coding 46 138 322 459 PB.8233.2 chr15 + 3744 11 novel_not_in_catalog HMG20A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1117 None 2 40 5 TRUE 0 0 NA C coding 205 615 122 736 PB.8233.1 chr15 + 3784 10 full-splice_match HMG20A ENST00000336216.8 4046 10 251 11 no_subtype FALSE canonical NA NA 1157 None 35 17 0 FALSE 0 0 NA C coding 347 1041 108 1148 PB.5594.1 chr9 + 3345 1 antisense novelGene_TSC1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 23 0 FALSE 0 0 NA A coding 111 333 976 1308 PB.6362.2 chr11 + 3626 17 novel_in_catalog TKFC novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3064 None 2 12 0 FALSE 0 0 NA B coding 575 1725 1490 3214 PB.9753.2 chr19 + 1350 10 novel_not_in_catalog MRPL4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 911 None 2 2 0 FALSE 0 0 NA C coding 311 933 173 1105 PB.9753.1 chr19 + 1435 9 full-splice_match MRPL4 ENST00000253099.10 1455 9 25 -5 no_subtype FALSE canonical NA NA 1001 None 12 3 0 FALSE 0 0 NA C coding 311 933 263 1195 PB.6362.1 chr11 + 2782 19 novel_not_in_catalog TKFC novel NA NA NA NA no_subtype FALSE canonical NA NA 2217 None 2 4 0 FALSE 0 0 NA B coding 575 1725 643 2367 PB.6362.4 chr11 + 3110 18 novel_not_in_catalog TKFC novel NA NA NA NA no_subtype FALSE canonical NA NA 2544 None 2 5 0 FALSE 0 0 NA B coding 575 1725 970 2694 PB.11213.4 chrX + 3705 9 novel_in_catalog IKBKG novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2996 None 7 9 0 FALSE 0 0 NA C coding 216 648 2489 3136 PB.6336.4 chr11 + 2846 1 incomplete-splice_match CTNND1 ENST00000526772.5 4966 14 2115 6 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C coding 125 375 988 1362 PB.8192.5 chr15 - 2300 11 novel_in_catalog PKM novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 74 None 3 4 0 FALSE 0 0 NA C coding 531 1593 88 1680 PB.8192.4 chr15 - 2344 11 full-splice_match PKM ENST00000335181.9 2318 11 -30 4 no_subtype FALSE canonical NA NA 121 None 109 3 0 FALSE 0 0 NA C coding 531 1593 135 1727 PB.6336.1 chr11 + 6127 19 full-splice_match CTNND1 ENST00000358694.10 6135 19 5 3 no_subtype FALSE canonical NA NA 3248 None 2 14 0 FALSE 0 0 NA C coding 933 2799 459 3257 PB.6336.3 chr11 + 3904 14 incomplete-splice_match CTNND1 ENST00000531014.5 5053 15 415 734 internal_fragment FALSE canonical NA NA 1756 None 2 8 0 FALSE 0 0 NA C coding 497 1491 275 1765 PB.10693.2 chr22 - 2763 20 full-splice_match ASCC2 ENST00000307790.7 2793 20 21 9 no_subtype FALSE canonical NA NA 76 None 92 5 2 FALSE 0 0 NA C coding 757 2271 94 2364 PB.4637.1 chr7 - 2725 2 genic_intron novelGene_1077 novel NA NA NA NA no_subtype FALSE canonical NA NA 2174 None 10 9 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9072.1 chr17 + 750 3 full-splice_match CCL4 ENST00000615863.1 904 3 143 11 no_subtype FALSE canonical NA NA 364 None 2 1 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.660.1 chr1 + 1259 1 antisense novelGene_GOLPH3L_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11213.8 chrX + 3268 8 novel_in_catalog IKBKG novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2185 None 9 9 1 FALSE 0 0 NA C coding 269 807 142 948 PB.8620.4 chr16 - 3131 13 novel_in_catalog AMFR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 94 None 4 8 0 FALSE 0 0 NA B coding 548 1644 32 1675 PB.10243.2 chr20 - 5922 18 incomplete-splice_match SIGLEC1 ENST00000344754.5 6720 21 792 6 5prime_fragment FALSE canonical NA NA 181 None 2 9 0 FALSE 0 0 NA B coding 1385 4155 181 4335 PB.10243.3 chr20 - 3607 10 incomplete-splice_match SIGLEC1 ENST00000344754.5 6720 21 3106 7 5prime_fragment FALSE canonical NA NA 150 None 2 10 0 FALSE 0 0 NA B coding 652 1956 66 2021 PB.4905.1 chr8 - 3121 2 antisense novelGene_HOOK3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1634 None 2 21 1 FALSE 0 0 NA A coding 78 234 66 299 PB.1449.1 chr2 - 1496 8 novel_not_in_catalog TMEM150A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 59 None 2 10 1 FALSE 0 0 NA A coding 187 561 406 966 PB.6259.1 chr11 - 2810 21 full-splice_match CSTF3 ENST00000323959.8 2797 21 -20 7 no_subtype FALSE canonical NA NA 187 None 30 1 0 FALSE 0 0 NA A coding 717 2151 161 2311 PB.5413.1 chr9 + 3915 21 novel_not_in_catalog RNF20 novel NA NA NA NA no_subtype FALSE canonical NA NA 2818 None 29 2 0 TRUE 0 0 NA B coding 975 2925 68 2992 PB.5413.2 chr9 + 1804 14 novel_not_in_catalog RNF20 novel NA NA NA NA no_subtype FALSE canonical NA NA 1599 None 4 0 0 TRUE 0 0 NA B coding 578 1734 70 1803 PB.7959.49 chr14 - 1486 7 fusion IGHA1,CH17-212P11.5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 106 None 2 6 2 TRUE 0 0 NA B coding 254 762 678 1439 PB.7959.46 chr14 - 1455 7 fusion IGHV1-12,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 52 None 2 16 3 TRUE 0 0 NA A coding 254 762 644 1405 PB.7959.47 chr14 - 1494 10 fusion IGHV3-62,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 118 None 3 24 3 TRUE 0 0 NA B coding 139 417 973 1389 PB.4818.2 chr8 + 2468 15 novel_not_in_catalog DMTN novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1302 None 4 5 1 FALSE 0 0 NA B coding 346 1038 203 1240 PB.4818.3 chr8 + 2592 15 novel_not_in_catalog DMTN novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1418 None 2 5 1 FALSE 0 0 NA B coding 346 1038 319 1356 PB.7959.42 chr14 - 1468 8 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 85 None 2 12 4 TRUE 0 0 NA B coding 472 1416 3 1418 PB.4818.5 chr8 + 2521 15 novel_not_in_catalog DMTN novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1348 None 2 4 1 FALSE 0 0 NA B coding 346 1038 249 1286 PB.7959.40 chr14 - 1503 7 fusion IGHV3-62,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 124 None 4 16 3 TRUE 0 0 NA B coding 254 762 692 1453 PB.9684.1 chr19 - 1422 13 full-splice_match STAP2 ENST00000594605.5 1426 13 2 2 no_subtype FALSE canonical NA NA 224 None 2 5 0 FALSE 0 0 NA A coding 403 1209 123 1331 PB.6358.1 chr11 + 3072 11 full-splice_match CD5 ENST00000347785.7 3221 11 141 8 no_subtype FALSE canonical NA NA 1515 None 98 10 0 FALSE 0 0 NA A coding 495 1485 26 1510 PB.3885.6 chr6 + 1852 7 full-splice_match SRSF3 ENST00000477442.6 1095 7 -27 -730 no_subtype FALSE canonical NA NA 1043 None 3 16 0 FALSE 0 0 NA C coding 124 372 121 492 PB.3885.5 chr6 + 2696 6 novel_in_catalog SRSF3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1882 None 3 10 0 FALSE 0 0 NA C coding 128 384 123 506 PB.3885.4 chr6 + 3650 6 full-splice_match SRSF3 ENST00000373715.10 4222 6 -3 575 no_subtype FALSE canonical NA NA 586 None 106 41 0 FALSE 0 0 NA C coding 164 492 120 611 PB.3885.3 chr6 + 1735 7 novel_not_in_catalog SRSF3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 921 None 3 33 1 FALSE 0 0 NA C coding 124 372 123 494 PB.3885.2 chr6 + 1622 7 novel_not_in_catalog SRSF3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 666 None 3 20 2 TRUE 0 0 NA C coding 124 372 123 494 PB.3885.1 chr6 + 3083 5 novel_in_catalog SRSF3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2755 None 19 10 0 FALSE 0 0 NA C coding 128 384 121 504 PB.1980.1 chr3 + 3477 11 novel_not_in_catalog THUMPD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1456 None 4 20 0 TRUE 0 0 NA A coding 507 1521 98 1618 PB.1441.3 chr2 - 2042 6 novel_not_in_catalog TGOLN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 73 None 50 9 2 TRUE 0 0 NA B coding 184 552 28 579 PB.3370.13 chr5 - 5921 2 novel_not_in_catalog MEF2C novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3106 None 2 37 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.4602.3 chr7 - 2869 21 full-splice_match SLC26A3 ENST00000340010.9 2863 21 -12 6 no_subtype FALSE canonical NA NA 109 None 1222 9 0 FALSE 0 0 NA C coding 764 2292 198 2489 PB.176.1 chr1 - 1888 6 novel_not_in_catalog GPN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 609 None 3 5 1 TRUE 0 0 NA C coding 310 930 199 1128 PB.4350.1 chr7 + 3909 2 genic AC006978.6 novel NA NA NA NA no_subtype FALSE canonical NA NA 573 None 2 19 0 FALSE 0 0 NA A coding 132 396 2942 3337 PB.1441.2 chr2 - 2864 12 novel_not_in_catalog RETSAT novel NA NA NA NA no_subtype FALSE non_canonical NA NA 223 None 2 5 1 TRUE 0 0 NA A coding 439 1317 52 1368 PB.2710.1 chr4 + 3304 15 novel_in_catalog WHSC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2159 None 2 4 0 FALSE 0 0 NA A coding 791 2373 56 2428 PB.3370.10 chr5 - 3129 7 novel_not_in_catalog MEF2C novel NA NA NA NA no_subtype TRUE non_canonical NA NA 222 None 3 19 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.4602.5 chr7 - 3108 22 novel_not_in_catalog SLC26A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 90 None 41 10 1 TRUE 0 0 NA C coding 764 2292 432 2723 PB.8888.3 chr17 + 3021 16 novel_in_catalog ACADVL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2714 None 2 11 0 FALSE 0 0 NA C coding 275 825 73 897 PB.8888.2 chr17 + 2917 17 novel_in_catalog ACADVL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2615 None 3 18 0 FALSE 0 0 NA C coding 270 810 1944 2753 PB.8888.1 chr17 + 2199 20 full-splice_match ACADVL ENST00000356839.9 2323 20 109 15 no_subtype FALSE canonical NA NA 1897 None 19 3 0 FALSE 0 0 NA C coding 655 1965 71 2035 PB.3370.11 chr5 - 3135 7 novel_not_in_catalog MEF2C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 230 None 3 23 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.1441.4 chr2 - 2825 1 incomplete-splice_match TGOLN2 ENST00000398263.6 6138 5 2134 1180 no_subtype FALSE canonical NA NA NA None 11 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3094.1 chr4 + 2928 9 full-splice_match ARFIP1 ENST00000353617.6 3111 9 178 5 no_subtype TRUE canonical NA NA 1087 None 11 4 0 FALSE 0 0 NA A coding 373 1119 122 1240 PB.535.1 chr1 - 2120 5 novel_not_in_catalog TAF13 novel NA NA NA NA no_subtype FALSE canonical NA NA 65 None 2 20 1 TRUE 0 0 NA A coding 124 372 39 410 PB.6715.1 chr11 - 1811 7 full-splice_match ESAM ENST00000278927.9 1826 7 -6 21 no_subtype FALSE canonical NA NA 206 None 40 2 0 FALSE 0 0 NA A coding 390 1170 137 1306 PB.4629.2 chr7 + 2920 11 novel_in_catalog ING3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1222 None 2 10 0 FALSE 0 0 NA C coding 418 1254 122 1375 PB.4629.3 chr7 + 1702 11 full-splice_match ING3 ENST00000427726.5 1718 11 26 -10 no_subtype FALSE canonical NA NA 1129 None 2 1 0 FALSE 0 0 NA C coding 192 576 668 1243 PB.4629.1 chr7 + 1776 12 full-splice_match ING3 ENST00000315870.9 3777 12 59 1942 no_subtype FALSE canonical NA NA 1229 None 5 0 0 FALSE 0 0 NA C coding 418 1254 90 1343 PB.4370.1 chr7 + 2921 3 novel_not_in_catalog RP11-379H18.1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2185 None 2 23 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.2700.1 chr4 + 2807 4 full-splice_match ZNF141 ENST00000240499.7 2970 4 -56 219 no_subtype FALSE canonical NA NA 431 None 5 12 0 FALSE 0 0 NA A coding 474 1422 206 1627 PB.8616.1 chr16 + 2786 13 full-splice_match MMP2 ENST00000219070.8 3741 13 499 456 no_subtype FALSE canonical NA NA 1889 None 74 4 0 FALSE 0 0 NA C coding 656 1968 23 1990 PB.8616.2 chr16 + 2717 14 novel_not_in_catalog MMP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1818 None 5 3 0 TRUE 0 0 NA C coding 584 1752 168 1919 PB.3094.2 chr4 - 3937 2 genic_intron novelGene_1253 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1484 None 6 36 1 FALSE 0 0 NA A coding 118 354 2259 2612 PB.3589.5 chr5 - 2713 8 novel_not_in_catalog CCDC69 novel NA NA NA NA no_subtype FALSE canonical NA NA 72 None 3 5 1 TRUE 0 0 NA B coding 149 447 195 641 PB.7537.1 chr13 - 3383 2 novel_not_in_catalog SPRY2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1201 None 8 11 1 TRUE 0 0 NA A coding 315 945 1664 2608 PB.10546.1 chr21 - 1310 1 genic_intron novelGene_339 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4253.1 chr6 + 3074 13 full-splice_match SMOC2 ENST00000356284.6 3117 13 34 9 no_subtype FALSE canonical NA NA 1509 None 48 7 0 FALSE 0 0 NA A coding 446 1338 187 1524 PB.2370.1 chr3 + 1540 2 genic_intron novelGene_996 novel NA NA NA NA no_subtype FALSE canonical NA NA 1268 None 2 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.769.6 chr1 + 2657 6 novel_not_in_catalog MNDA novel NA NA NA NA no_subtype FALSE canonical NA NA 2418 None 15 15 1 FALSE 0 0 NA C coding 162 486 1776 2261 PB.5437.4 chr9 - 3046 1 novel_in_catalog KIAA0368 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.182.1 chr1 - 1550 1 full-splice_match CHCHD3P3 ENST00000446783.1 640 1 -126 -784 no_subtype FALSE canonical NA NA NA None 16 5 0 FALSE 0 0 NA A coding 101 303 127 429 PB.5437.1 chr9 - 3271 1 genic KIAA0368 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7294.2 chr12 - 3786 10 novel_not_in_catalog VSIG10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 296 None 2 11 2 TRUE 0 0 NA C coding 540 1620 218 1837 PB.7294.1 chr12 - 4000 9 full-splice_match VSIG10 ENST00000359236.9 4946 9 55 891 no_subtype FALSE canonical NA NA 301 None 2 7 0 FALSE 0 0 NA C coding 540 1620 223 1842 PB.4911.7 chr8 - 6582 35 incomplete-splice_match PRKDC ENST00000338368.7 12784 85 6819 -617 5prime_fragment FALSE canonical NA NA 126 None 2 13 0 FALSE 0 0 NA B coding 1817 5451 74 5524 PB.4810.2 chr8 + 3255 2 genic_intron novelGene_170 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 25 None 5 24 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8004.1 chr15 + 1592 11 full-splice_match ZFYVE19 ENST00000355341.8 2775 11 665 518 no_subtype FALSE canonical NA NA 1173 None 2 4 0 FALSE 0 0 NA A coding 396 1188 62 1249 PB.6554.2 chr11 + 3646 1 antisense novelGene_AP000580.1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 34 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1849.1 chr2 - 3214 1 incomplete-splice_match IGFBP5 ENST00000233813.4 6215 4 2766 236 no_subtype FALSE canonical NA NA NA None 22 15 0 FALSE 0 0 NA C coding 143 429 649 1077 PB.1849.2 chr2 - 1497 4 full-splice_match IGFBP5 ENST00000233813.4 6215 4 199 4519 no_subtype FALSE canonical NA NA 888 None 14 3 0 FALSE 0 0 NA C coding 272 816 552 1367 PB.10724.5 chr22 + 1270 5 novel_in_catalog TOM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 358 None 3 8 1 FALSE 0 0 NA C coding 161 483 28 510 PB.2835.1 chr4 - 1713 15 full-splice_match TXK ENST00000264316.8 2914 15 39 1162 no_subtype FALSE canonical NA NA 63 None 6 0 0 FALSE 0 0 NA C coding 527 1581 48 1628 PB.10724.1 chr22 + 3824 15 novel_not_in_catalog TOM1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2916 None 2 11 0 FALSE 0 0 NA C coding 516 1548 69 1616 PB.10724.2 chr22 + 1618 3 full-splice_match TOM1 ENST00000487670.1 849 3 0 -769 no_subtype FALSE canonical NA NA 195 None 3 6 0 FALSE 0 0 NA C coding 106 318 59 376 PB.10724.3 chr22 + 2268 15 full-splice_match TOM1 ENST00000449058.6 2389 15 99 22 no_subtype FALSE canonical NA NA 1350 None 4 4 0 FALSE 0 0 NA C coding 492 1476 27 1502 PB.6478.12 chr11 + 1916 9 novel_not_in_catalog TBC1D10C novel NA NA NA NA no_subtype FALSE canonical NA NA 1236 None 4 1 0 TRUE 0 0 NA C coding 219 657 110 766 PB.6478.10 chr11 + 1833 10 novel_not_in_catalog TBC1D10C novel NA NA NA NA no_subtype FALSE canonical NA NA 1153 None 8 3 0 FALSE 0 0 NA C coding 446 1338 161 1498 PB.6478.11 chr11 + 2643 7 novel_in_catalog TBC1D10C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1963 None 10 5 1 FALSE 0 0 NA C coding 220 660 1649 2308 PB.6478.14 chr11 + 3282 2 incomplete-splice_match TBC1D10C ENST00000526474.1 4480 3 1196 2 internal_fragment FALSE canonical NA NA 2602 None 2 15 0 FALSE 0 0 NA C coding 118 354 2594 2947 PB.104.1 chr1 + 1548 1 incomplete-splice_match OTUD3 ENST00000375120.3 6397 8 4840 10 no_subtype FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5086.1 chr8 + 6440 48 full-splice_match COL14A1 ENST00000297848.7 6466 48 26 0 no_subtype TRUE canonical NA NA 5555 None 3 12 0 FALSE 0 0 NA A coding 1789 5367 266 5632 PB.8161.12 chr15 - 2158 2 genic_intron novelGene_618 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 494 None 4 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7253.1 chr12 + 1865 15 full-splice_match TCTN1 ENST00000551590.5 2309 15 138 306 no_subtype FALSE non_canonical NA NA 1783 None 2 1 1 FALSE 0 0 NA A coding 587 1761 19 1779 PB.4293.1 chr7 + 3181 3 genic AC005532.5 novel NA NA NA NA no_subtype FALSE canonical NA NA 3109 None 2 37 2 TRUE 0 0 NA A non_coding NA NA NA NA PB.2815.1 chr4 + 1726 3 full-splice_match RHOH ENST00000381799.9 4305 3 122 2457 no_subtype FALSE canonical NA NA 393 None 3 2 0 FALSE 0 0 NA C coding 191 573 603 1175 PB.6826.1 chr12 + 1603 6 full-splice_match KLRD1 ENST00000336164.8 3258 6 52 1603 no_subtype FALSE canonical NA NA 627 None 4 7 0 FALSE 0 0 NA C coding 156 468 278 745 PB.704.1 chr1 + 2904 11 novel_not_in_catalog IL6R novel NA NA NA NA no_subtype FALSE canonical NA NA 1188 None 52 3 0 TRUE 0 0 NA C coding 468 1404 29 1432 PB.6826.2 chr12 + 3096 7 novel_not_in_catalog KLRD1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2710 None 2 24 1 TRUE 0 0 NA C coding 156 468 274 741 PB.4597.4 chr7 - 3108 3 genic_intron novelGene_963 novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 2 23 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4461.1 chr7 + 4257 32 novel_not_in_catalog GTF2I novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4167 None 2 26 3 TRUE 0 0 NA B coding 901 2703 356 3058 PB.6334.2 chr11 + 2720 3 novel_in_catalog TMX2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1847 None 2 23 0 FALSE 0 0 NA C coding 115 345 1876 2220 PB.5374.8 chr9 + 3616 1 genic_intron novelGene_851 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10469.1 chr20 - 2526 6 full-splice_match PRELID3B ENST00000355937.8 2626 6 92 8 no_subtype FALSE canonical NA NA 119 None 15 14 0 FALSE 0 0 NA A coding 194 582 88 669 PB.9318.2 chr17 - 1672 1 antisense novelGene_RP11-360N9.3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9318.3 chr17 - 2588 3 genic_intron novelGene_637 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 220 None 5 9 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.8150.1 chr15 - 1859 5 novel_in_catalog OAZ2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 187 None 23 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10157.1 chr19 - 3803 8 novel_not_in_catalog ZNF160 novel NA NA NA NA no_subtype FALSE canonical NA NA 151 None 2 9 0 TRUE 0 0 NA A coding 818 2454 398 2851 PB.5374.1 chr9 + 3162 18 full-splice_match FGD3 ENST00000416701.6 3432 18 263 7 no_subtype FALSE canonical NA NA 2270 None 52 5 0 FALSE 0 0 NA C coding 724 2172 348 2519 PB.5374.7 chr9 + 5108 15 novel_in_catalog FGD3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4216 None 2 15 0 FALSE 0 0 NA C coding 348 1044 551 1594 PB.5712.1 chr10 - 1925 10 novel_not_in_catalog PRTFDC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 72 None 6 0 0 TRUE 0 0 NA A coding 225 675 28 702 PB.7959.101 chr14 - 1497 11 fusion IGHA1,IGHV3-13 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 126 None 3 16 5 TRUE 0 0 NA A coding 254 762 691 1452 PB.3450.1 chr5 - 1477 5 novel_not_in_catalog C5orf63 novel NA NA NA NA no_subtype FALSE canonical NA NA 39 None 4 6 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2499.1 chr3 + 2614 6 novel_not_in_catalog PXYLP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 562 None 7 4 0 TRUE 0 0 NA B coding 480 1440 55 1494 PB.4597.1 chr7 - 2695 22 full-splice_match COG5 ENST00000297135.7 4060 22 606 759 no_subtype FALSE canonical NA NA 106 None 22 4 0 FALSE 0 0 NA C coding 829 2487 13 2499 PB.7317.1 chr12 + 1874 11 novel_not_in_catalog ACADS novel NA NA NA NA no_subtype TRUE canonical NA NA 1164 None 14 5 0 TRUE 0 0 NA A coding 412 1236 79 1314 PB.6334.1 chr11 + 1571 8 full-splice_match TMX2 ENST00000278422.8 1631 8 53 7 no_subtype FALSE canonical NA NA 703 None 17 7 0 FALSE 0 0 NA C coding 227 681 167 847 PB.1593.1 chr2 + 3383 1 genic_intron novelGene_1146 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5881.4 chr10 + 2889 2 novel_in_catalog GHITM novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2596 None 2 24 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5881.1 chr10 + 1922 9 full-splice_match GHITM ENST00000372134.5 2128 9 132 74 no_subtype FALSE canonical NA NA 1014 None 35 6 0 FALSE 0 0 NA C coding 345 1035 62 1096 PB.6834.1 chr12 - 5575 23 full-splice_match LRP6 ENST00000261349.8 10020 23 -167 4612 no_subtype FALSE canonical NA NA 299 None 2 10 0 FALSE 0 0 NA A coding 1613 4839 245 5083 PB.9674.1 chr19 - 3591 10 full-splice_match CACTIN ENST00000429344.6 3612 10 12 9 no_subtype FALSE canonical NA NA 208 None 3 12 0 FALSE 0 0 NA A coding 758 2274 42 2315 PB.5881.2 chr10 + 1896 10 novel_not_in_catalog GHITM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1559 None 7 6 1 TRUE 0 0 NA C coding 345 1035 62 1096 PB.7959.105 chr14 - 1476 9 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 81 None 2 14 4 TRUE 0 0 NA B coding 251 753 679 1431 PB.31.1 chr1 - 3121 15 novel_in_catalog PLEKHG5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 258 None 6 6 0 FALSE 0 0 NA A coding 846 2538 148 2685 PB.11056.2 chrX - 1576 7 novel_not_in_catalog ITM2A novel NA NA NA NA no_subtype FALSE canonical NA NA 32 None 2 7 0 FALSE 0 0 NA A coding 285 855 18 872 PB.7142.1 chr12 + 2613 2 novel_not_in_catalog TMTC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 636 None 12 28 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.7860.2 chr14 + 2872 1 novel_in_catalog C14orf159 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 18 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10231.1 chr20 + 3356 3 antisense novelGene_SNRPB_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3117 None 2 17 0 FALSE 0 0 NA A coding 118 354 920 1273 PB.5900.1 chr10 - 2769 10 full-splice_match LIPA ENST00000336233.9 2782 10 3 10 no_subtype FALSE canonical NA NA 319 None 126 8 0 FALSE 0 0 NA A coding 399 1197 321 1517 PB.2829.1 chr4 + 6512 24 novel_not_in_catalog ATP10D novel NA NA NA NA no_subtype FALSE canonical NA NA 4170 None 12 15 0 TRUE 0 0 NA A coding 1234 3702 806 4507 PB.9403.6 chr17 - 2885 21 novel_not_in_catalog TMC6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 54 None 5 7 3 TRUE 0 0 NA B coding 805 2415 246 2660 PB.481.1 chr1 - 2917 19 full-splice_match GLMN ENST00000370360.7 1995 19 29 -951 no_subtype FALSE canonical NA NA 23 None 5 14 0 FALSE 0 0 NA A coding 594 1782 54 1835 PB.5629.2 chr9 - 2248 9 full-splice_match FBXW5 ENST00000325285.7 2274 9 22 4 no_subtype FALSE canonical NA NA 35 None 5 5 0 FALSE 0 0 NA C coding 566 1698 59 1756 PB.2809.1 chr4 - 2791 8 full-splice_match RPL9 ENST00000295955.13 750 8 33 -2074 no_subtype FALSE canonical NA NA 25 None 122 28 1 FALSE 0 0 NA C coding 192 576 27 602 PB.1846.1 chr2 - 1638 8 full-splice_match PECR ENST00000265322.7 1853 8 5 210 no_subtype FALSE canonical NA NA 194 None 26 3 0 FALSE 0 0 NA A coding 322 966 14 979 PB.10466.2 chr20 + 1478 14 novel_not_in_catalog GNAS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1057 None 13 0 0 TRUE 0 0 NA C coding 380 1140 62 1201 PB.5284.21 chr9 - 8231 57 novel_not_in_catalog TLN1 novel NA NA NA NA no_subtype TRUE canonical NA NA 122 None 3 9 1 FALSE 0 0 NA C coding 2541 7623 156 7778 PB.5185.1 chr8 - 1915 6 full-splice_match ZNF34 ENST00000343459.8 1901 6 -23 9 no_subtype FALSE canonical NA NA 49 None 4 8 0 FALSE 0 0 NA A coding 560 1680 90 1769 PB.10836.1 chr22 + 1399 2 novel_in_catalog PIM3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 265 None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7898.1 chr14 + 2025 2 novel_in_catalog GSKIP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 262 None 9 3 0 FALSE 0 0 NA A coding 139 417 5 421 PB.10466.5 chr20 + 1550 14 novel_not_in_catalog GNAS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1047 None 6 0 0 TRUE 0 0 NA C coding 379 1137 55 1191 PB.1412.2 chr2 + 6180 54 novel_not_in_catalog DYSF novel NA NA NA NA no_subtype FALSE canonical NA NA 5879 None 2 0 0 TRUE 0 0 NA B coding 1942 5826 90 5915 PB.5910.1 chr10 + 3505 6 novel_in_catalog HECTD2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1180 None 6 10 0 FALSE 0 0 NA A coding 127 381 918 1298 PB.8691.3 chr16 + 1541 1 novel_in_catalog NFATC3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10466.7 chr20 + 1391 13 novel_not_in_catalog GNAS novel NA NA NA NA no_subtype FALSE canonical NA NA 887 None 20 0 0 FALSE 0 0 NA C coding 321 963 69 1031 PB.2778.1 chr4 + 5875 2 genic_intron novelGene_252 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5074 None 3 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2098.4 chr3 - 2635 15 full-splice_match PLCD1 ENST00000334661.4 2769 15 120 14 no_subtype FALSE canonical NA NA 137 None 19 1 0 FALSE 0 0 NA C coding 756 2268 104 2371 PB.2098.5 chr3 - 2690 15 full-splice_match PLCD1 ENST00000463876.5 2963 15 267 6 no_subtype FALSE canonical NA NA 184 None 5 1 0 FALSE 0 0 NA C coding 777 2331 88 2418 PB.2098.2 chr3 - 2725 14 novel_in_catalog PLCD1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 145 None 8 6 0 FALSE 0 0 NA C coding 701 2103 112 2214 PB.2098.3 chr3 - 2688 14 novel_in_catalog PLCD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 116 None 4 3 0 FALSE 0 0 NA C coding 722 2166 20 2185 PB.9876.2 chr19 + 6123 29 novel_not_in_catalog MAST3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3631 None 6 11 1 FALSE 0 0 NA B coding 1243 3729 436 4164 PB.2437.2 chr3 - 3187 18 novel_not_in_catalog MYLK novel NA NA NA NA no_subtype FALSE canonical NA NA 839 None 155 0 0 TRUE 0 0 NA B coding 992 2976 158 3133 PB.7917.1 chr14 + 1464 5 full-splice_match YY1 ENST00000262238.8 6697 5 186 5047 no_subtype FALSE canonical NA NA 1136 None 3 2 0 FALSE 0 0 NA A coding 414 1242 75 1316 PB.6047.5 chr10 - 1465 9 full-splice_match CACUL1 ENST00000369151.7 11311 9 285 9561 no_subtype FALSE canonical NA NA 566 None 4 4 0 FALSE 0 0 NA C coding 369 1107 200 1306 PB.10910.1 chrX + 3745 4 intergenic novelGene_361 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3189 None 2 33 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.980.1 chr1 + 2742 3 full-splice_match PRELP ENST00000343110.2 5747 3 10 2995 no_subtype FALSE canonical NA NA 1090 None 69 9 0 FALSE 0 0 NA A coding 382 1146 118 1263 PB.9654.1 chr19 + 1579 9 full-splice_match SF3A2 ENST00000221494.9 1963 9 358 26 no_subtype FALSE canonical NA NA 692 None 81 2 0 FALSE 0 0 NA A coding 464 1392 78 1469 PB.1966.1 chr2 - 1025 5 full-splice_match DTYMK ENST00000305784.6 1232 5 190 17 no_subtype FALSE canonical NA NA 148 None 4 6 0 FALSE 0 0 NA A coding 212 636 19 654 PB.7373.1 chr12 + 1632 15 full-splice_match NOC4L ENST00000330579.5 1632 15 -17 17 no_subtype TRUE canonical NA NA 1489 None 19 1 0 FALSE 0 0 NA A coding 516 1548 59 1606 PB.6487.1 chr11 - 2249 11 full-splice_match UNC93B1 ENST00000227471.6 2316 11 65 2 no_subtype FALSE canonical NA NA 111 None 3 1 0 FALSE 0 0 NA A coding 597 1791 16 1806 PB.8592.3 chr16 + 4357 32 novel_in_catalog PHKB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3244 None 2 3 0 FALSE 0 0 NA C coding 1086 3258 122 3379 PB.8592.2 chr16 + 4029 33 novel_not_in_catalog PHKB novel NA NA NA NA no_subtype FALSE canonical NA NA 3263 None 3 0 0 TRUE 0 0 NA C coding 1086 3258 141 3398 PB.2064.1 chr3 + 3063 1 incomplete-splice_match RBMS3 ENST00000434693.6 8540 15 5468 10 no_subtype FALSE canonical NA NA NA None 11 26 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3355.4 chr5 - 5495 1 genic_intron novelGene_756 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 32 0 FALSE 0 0 NA A coding 112 336 3144 3479 PB.3355.2 chr5 - 1532 1 genic_intron novelGene_755 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3355.1 chr5 - 3279 18 novel_not_in_catalog SSBP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 159 None 4 13 0 TRUE 0 0 NA A coding 361 1083 98 1180 PB.8592.4 chr16 + 3007 1 novel_in_catalog PHKB novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9737.1 chr19 + 3049 3 novel_not_in_catalog HNRNPM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2710 None 3 29 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.2518.1 chr3 - 1769 10 novel_not_in_catalog PLSCR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 91 None 2 7 1 FALSE 0 0 NA A coding 318 954 196 1149 PB.10135.3 chr19 + 3175 13 novel_not_in_catalog SIGLEC9 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3048 None 3 18 3 TRUE 0 0 NA B coding 461 1383 66 1448 PB.5247.1 chr9 + 3178 1 antisense novelGene_MOB3B_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6704.3 chr11 - 3034 1 antisense novelGene_SORL1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 30 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6704.1 chr11 - 2025 1 antisense novelGene_SORL1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 10 0 FALSE 0 0 NA B coding 85 255 58 312 PB.5356.2 chr9 + 4188 5 full-splice_match SPIN1 ENST00000485565.6 706 5 5 -3487 no_subtype FALSE canonical NA NA 575 None 2 35 0 FALSE 0 0 NA C coding 131 393 380 772 PB.5356.3 chr9 + 2960 1 incomplete-splice_match SPIN1 ENST00000375859.3 4484 6 1520 5 no_subtype FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5356.1 chr9 + 4003 4 novel_in_catalog SPIN1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 389 None 3 26 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3046.2 chr4 + 4050 20 full-splice_match NAA15 ENST00000296543.9 6222 20 103 2069 no_subtype FALSE canonical NA NA 2620 None 3 1 0 FALSE 0 0 NA C coding 866 2598 221 2818 PB.3696.5 chr5 - 3045 9 novel_not_in_catalog TBC1D9B novel NA NA NA NA no_subtype FALSE canonical NA NA 182 None 2 14 1 TRUE 0 0 NA B coding 609 1827 65 1891 PB.8733.1 chr16 + 1514 10 novel_not_in_catalog DHODH novel NA NA NA NA no_subtype TRUE canonical NA NA 1154 None 3 1 0 TRUE 0 0 NA A coding 395 1185 22 1206 PB.3194.1 chr5 - 2699 4 full-splice_match GOLPH3 ENST00000265070.6 2721 4 2 20 no_subtype FALSE canonical NA NA 539 None 18 4 0 FALSE 0 0 NA C coding 298 894 315 1208 PB.3194.3 chr5 - 1642 1 incomplete-splice_match GOLPH3 ENST00000265070.6 2721 4 1056 24 no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA C coding 100 300 279 578 PB.724.1 chr1 + 1363 11 novel_in_catalog FDPS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1108 None 2 0 0 FALSE 0 0 NA B coding 419 1257 50 1306 PB.1855.2 chr2 - 3052 1 antisense novelGene_ARPC2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 16 20 0 FALSE 0 0 NA A coding 134 402 1069 1470 PB.5615.1 chr9 - 1225 10 novel_not_in_catalog FCN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 143 None 35 0 0 TRUE 0 0 NA A coding 326 978 41 1018 PB.6803.1 chr12 + 3960 18 full-splice_match CLSTN3 ENST00000266546.10 4185 18 210 15 no_subtype TRUE canonical NA NA 2970 None 11 6 0 FALSE 0 0 NA A coding 956 2868 241 3108 PB.9378.2 chr17 - 1361 9 full-splice_match MRPL38 ENST00000309352.3 1888 9 521 6 no_subtype FALSE canonical NA NA 84 None 18 1 0 FALSE 0 0 NA C coding 380 1140 18 1157 PB.9378.3 chr17 - 1359 9 novel_not_in_catalog MRPL38 novel NA NA NA NA no_subtype FALSE canonical NA NA 80 None 2 2 0 FALSE 0 0 NA C coding 346 1038 116 1153 PB.4770.2 chr7 - 3932 1 genic_intron novelGene_1261 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 37 0 FALSE 0 0 NA A coding 63 189 153 341 PB.1085.1 chr1 - 1478 7 full-splice_match SDE2 ENST00000272091.7 3975 7 9 2488 no_subtype FALSE canonical NA NA 130 None 12 0 0 FALSE 0 0 NA A coding 451 1353 11 1363 PB.2389.1 chr3 - 1805 1 genic_intron novelGene_1015 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9378.4 chr17 - 1436 10 novel_not_in_catalog RP11-552F3.12 novel NA NA NA NA no_subtype FALSE canonical NA NA 72 None 4 2 0 FALSE 0 0 NA A coding 346 1038 195 1232 PB.5826.5 chr10 - 3233 2 novel_not_in_catalog PRF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 585 None 2 13 0 TRUE 0 0 NA C coding 194 582 1734 2315 PB.1651.1 chr2 - 1810 3 novel_in_catalog NR4A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 205 None 2 1 0 FALSE 0 0 NA A coding 298 894 332 1225 PB.9158.2 chr17 + 2751 8 novel_not_in_catalog CD300LG novel NA NA NA NA no_subtype FALSE canonical NA NA 916 None 3 10 0 FALSE 0 0 NA B coding 321 963 65 1027 PB.9158.3 chr17 + 2784 7 novel_not_in_catalog CD300LG novel NA NA NA NA no_subtype FALSE canonical NA NA 944 None 2 23 1 FALSE 0 0 NA B coding 338 1014 42 1055 PB.233.1 chr1 - 1595 7 full-splice_match ZBTB8OS ENST00000468695.5 1601 7 7 -1 no_subtype FALSE canonical NA NA 145 None 18 12 0 FALSE 0 0 NA A coding 179 537 13 549 PB.1732.8 chr2 + 4182 24 novel_not_in_catalog DNAJC10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2796 None 2 9 0 TRUE 0 0 NA B coding 793 2379 427 2805 PB.3369.1 chr5 + 1637 1 genic_intron novelGene_807 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA A coding 4 12 347 358 PB.2427.4 chr3 + 6184 7 novel_not_in_catalog PARP14 novel NA NA NA NA no_subtype FALSE canonical NA NA 3110 None 5 18 1 FALSE 0 0 NA B coding 1027 3081 438 3518 PB.1732.1 chr2 + 3513 25 novel_not_in_catalog DNAJC10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2892 None 4 5 0 TRUE 0 0 NA B coding 793 2379 523 2901 PB.1732.2 chr2 + 3741 24 novel_not_in_catalog DNAJC10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2844 None 13 7 0 TRUE 0 0 NA B coding 793 2379 475 2853 PB.2427.7 chr3 + 3560 10 novel_not_in_catalog PARP14 novel NA NA NA NA no_subtype FALSE canonical NA NA 3093 None 2 9 0 FALSE 0 0 NA B coding 653 1959 23 1981 PB.1732.4 chr2 + 4285 25 novel_not_in_catalog DNAJC10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2900 None 8 7 0 FALSE 0 0 NA B coding 793 2379 531 2909 PB.2427.1 chr3 + 6678 17 novel_not_in_catalog PARP14 novel NA NA NA NA no_subtype FALSE canonical NA NA 5145 None 24 16 1 FALSE 0 0 NA B coding 1665 4995 438 5432 PB.2427.2 chr3 + 5636 8 novel_not_in_catalog PARP14 novel NA NA NA NA no_subtype FALSE canonical NA NA 3347 None 14 15 1 FALSE 0 0 NA B coding 1048 3144 438 3581 PB.2427.3 chr3 + 4703 14 novel_not_in_catalog PARP14 novel NA NA NA NA no_subtype FALSE canonical NA NA 4236 None 9 4 1 FALSE 0 0 NA B coding 1422 4266 438 4703 PB.3349.1 chr5 + 6057 18 full-splice_match ZFYVE16 ENST00000338008.9 6773 18 16 700 no_subtype FALSE canonical NA NA 4625 None 6 13 1 FALSE 0 0 NA C coding 1539 4617 165 4781 PB.6489.10 chr11 + 2496 21 novel_not_in_catalog TCIRG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2343 None 2 22 5 TRUE 0 0 NA C coding 490 1470 950 2419 PB.10466.6 chr20 + 1550 13 novel_not_in_catalog GNAS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1047 None 2 2 0 TRUE 0 0 NA C coding 379 1137 55 1191 PB.596.1 chr1 - 2588 11 full-splice_match CASQ2 ENST00000261448.5 2674 11 66 20 no_subtype FALSE canonical NA NA 408 None 2 12 0 FALSE 0 0 NA A coding 399 1197 175 1371 PB.2012.4 chr3 - 1463 1 genic_intron novelGene_103 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 17 7 0 FALSE 0 0 NA A coding 122 366 992 1357 PB.4022.7 chr6 - 1374 10 incomplete-splice_match SYNCRIP ENST00000369622.7 3023 11 355 1294 internal_fragment FALSE canonical NA NA 134 None 6 0 0 FALSE 0 0 NA C coding 409 1227 147 1373 PB.4682.1 chr7 - 3862 11 novel_not_in_catalog SLC35B4 novel NA NA NA NA no_subtype FALSE canonical NA NA 300 None 2 22 0 TRUE 0 0 NA A coding 331 993 224 1216 PB.4149.2 chr6 + 3357 2 genic_intron novelGene_1170 novel NA NA NA NA no_subtype FALSE canonical NA NA 1260 None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6077.4 chr10 - 1611 1 genic_intron novelGene_1086 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A coding 100 300 650 949 PB.2012.1 chr3 - 3665 13 novel_not_in_catalog IQSEC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 42 None 19 3 0 FALSE 0 0 NA B coding 814 2442 344 2785 PB.2012.2 chr3 - 3424 12 novel_not_in_catalog IQSEC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 58 None 2 3 0 FALSE 0 0 NA B coding 814 2442 65 2506 PB.10173.1 chr19 + 2573 8 novel_not_in_catalog KMT5C novel NA NA NA NA no_subtype FALSE canonical NA NA 1409 None 2 4 0 FALSE 0 0 NA A coding 347 1041 860 1900 PB.1391.1 chr2 + 1408 9 full-splice_match PLEK ENST00000234313.7 2869 9 148 1313 no_subtype FALSE canonical NA NA 947 None 105 1 0 FALSE 0 0 NA C coding 350 1050 32 1081 PB.3438.1 chr5 + 3363 10 novel_in_catalog SNCAIP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2801 None 2 6 0 FALSE 0 0 NA A coding 919 2757 48 2804 PB.7112.3 chr12 + 2511 10 novel_not_in_catalog CCT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2238 None 2 14 1 TRUE 0 0 NA C coding 292 876 1391 2266 PB.2178.1 chr3 - 2684 11 full-splice_match PRKAR2A ENST00000265563.12 6471 11 -32 3819 no_subtype FALSE canonical NA NA 544 None 25 4 0 FALSE 0 0 NA A coding 404 1212 283 1494 PB.5817.1 chr10 + 1625 8 full-splice_match TSPAN15 ENST00000373290.6 1698 8 69 4 no_subtype FALSE canonical NA NA 788 None 4 6 0 FALSE 0 0 NA C coding 294 882 54 935 PB.11023.7 chrX + 3530 11 novel_not_in_catalog NONO novel NA NA NA NA no_subtype FALSE canonical NA NA 2306 None 2 18 1 TRUE 0 0 NA C coding 343 1029 133 1161 PB.11023.6 chrX + 2617 12 novel_not_in_catalog NONO novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1393 None 3 10 1 TRUE 0 0 NA C coding 471 1413 113 1525 PB.7959.122 chr14 - 1479 8 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 87 None 2 22 3 TRUE 0 0 NA B coding 251 753 682 1434 PB.7112.1 chr12 + 1924 16 full-splice_match CCT2 ENST00000299300.10 2041 16 109 8 no_subtype TRUE canonical NA NA 1656 None 31 2 0 FALSE 0 0 NA C coding 535 1605 80 1684 PB.11023.3 chrX + 2934 1 novel_in_catalog NONO novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 14 26 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.11023.2 chrX + 3128 12 novel_not_in_catalog NONO novel NA NA NA NA no_subtype FALSE canonical NA NA 1908 None 12 13 1 TRUE 0 0 NA C coding 390 1170 109 1278 PB.11023.1 chrX + 2636 12 novel_not_in_catalog NONO novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1414 None 299 10 1 TRUE 0 0 NA C coding 394 1182 135 1316 PB.6344.1 chr11 - 2660 3 novel_not_in_catalog OSBP novel NA NA NA NA no_subtype FALSE canonical NA NA 125 None 2 13 1 FALSE 0 0 NA A coding 115 345 138 482 PB.7959.128 chr14 - 1513 9 fusion IGHV4-34,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 82 None 2 14 3 TRUE 0 0 NA A coding 463 1389 81 1469 PB.6331.2 chr11 - 3301 5 novel_not_in_catalog UBE2L6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 69 None 4 13 1 TRUE 0 0 NA C coding 149 447 55 501 PB.822.1 chr1 - 3592 3 antisense novelGene_HSD17B7_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 835 None 3 20 2 FALSE 0 0 NA A coding 135 405 3186 3590 PB.4395.1 chr7 + 2545 6 novel_in_catalog BLVRA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 622 None 2 17 0 FALSE 0 0 NA A coding 273 819 60 878 PB.8131.3 chr15 + 1937 1 incomplete-splice_match RAB8B ENST00000321437.8 4943 8 2990 17 no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9285.1 chr17 + 5706 30 full-splice_match MRC2 ENST00000303375.9 5988 30 272 10 no_subtype FALSE canonical NA NA 4349 None 15 6 0 FALSE 0 0 NA A coding 1479 4437 131 4567 PB.6331.3 chr11 - 1193 4 full-splice_match UBE2L6 ENST00000287156.8 1354 4 150 11 no_subtype FALSE canonical NA NA 73 None 29 7 0 FALSE 0 0 NA C coding 149 447 59 505 PB.3461.6 chr5 - 2965 1 genic_intron novelGene_1141 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 15 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1788.2 chr2 + 2617 2 full-splice_match C2orf69 ENST00000319974.5 3728 2 143 968 no_subtype FALSE canonical NA NA 373 None 4 7 0 FALSE 0 0 NA A coding 269 807 389 1195 PB.3622.1 chr5 + 3325 1 antisense novelGene_RNF145_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 29 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2406.4 chr3 - 3564 1 genic_intron novelGene_1052 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 54 0 FALSE 0 0 NA A coding 159 477 1715 2191 PB.3593.1 chr5 - 2124 10 full-splice_match SPARC ENST00000231061.8 3701 10 230 1347 no_subtype FALSE canonical NA NA 71 None 2 1 0 FALSE 0 0 NA C coding 303 909 85 993 PB.1103.1 chr1 - 3346 3 novel_not_in_catalog CCSAP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 21 None 2 37 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.9971.1 chr19 + 2997 5 genic_intron novelGene_383 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2688 None 10 25 0 FALSE 0 0 NA B coding 115 345 1505 1849 PB.7331.4 chr12 - 2510 2 novel_in_catalog RHOF novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 164 None 3 6 0 FALSE 0 0 NA B coding 155 465 27 491 PB.5807.3 chr10 + 1385 10 full-splice_match HNRNPH3 ENST00000354695.5 1332 10 -58 5 no_subtype FALSE canonical NA NA 1095 None 2 1 0 FALSE 0 0 NA C coding 331 993 177 1169 PB.4400.1 chr7 + 2075 13 full-splice_match DBNL ENST00000494774.5 2117 13 -18 60 no_subtype FALSE canonical NA NA 1195 None 44 3 0 FALSE 0 0 NA A coding 431 1293 40 1332 PB.5643.1 chr9 - 1793 9 novel_in_catalog DPH7 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 254 None 2 4 0 FALSE 0 0 NA A coding 276 828 633 1460 PB.2912.1 chr4 + 1965 6 full-splice_match ENOPH1 ENST00000273920.7 2025 6 49 11 no_subtype FALSE canonical NA NA 865 None 11 13 0 FALSE 0 0 NA C coding 261 783 220 1002 PB.1432.7 chr2 + 2950 14 novel_not_in_catalog TTC31 novel NA NA NA NA no_subtype FALSE canonical NA NA 1639 None 11 6 0 TRUE 0 0 NA B coding 539 1617 10 1626 PB.6063.2 chr10 + 3042 6 novel_not_in_catalog PLEKHA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 323 None 4 10 0 FALSE 0 0 NA C coding 200 600 36 635 PB.7648.2 chr14 - 5661 31 novel_in_catalog HECTD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 144 None 2 2 0 FALSE 0 0 NA B coding 1832 5496 166 5661 PB.1275.10 chr2 - 2717 16 novel_not_in_catalog EIF2AK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 23 None 2 16 1 TRUE 0 0 NA B coding 262 786 207 992 PB.1275.11 chr2 - 2693 17 novel_not_in_catalog EIF2AK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 90 None 7 15 2 TRUE 0 0 NA B coding 262 786 274 1059 PB.7647.1 chr14 + 2855 11 full-splice_match COCH ENST00000216361.8 2397 11 17 -475 no_subtype FALSE canonical NA NA 1856 None 2 15 0 FALSE 0 0 NA A coding 550 1650 380 2029 PB.10516.1 chr21 - 3623 6 novel_not_in_catalog RWDD2B novel NA NA NA NA no_subtype TRUE canonical NA NA 58 None 2 16 0 TRUE 0 0 NA A coding 313 939 10 948 PB.1275.15 chr2 - 1802 13 novel_not_in_catalog EIF2AK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 17 None 2 12 1 TRUE 0 0 NA B coding 262 786 201 986 PB.5251.1 chr9 + 2001 1 full-splice_match RBMXP2 ENST00000434705.1 1168 1 -155 -678 no_subtype FALSE canonical NA NA NA None 18 8 0 FALSE 0 0 NA A coding 256 768 156 923 PB.851.1 chr1 - 1457 12 full-splice_match NME7 ENST00000367811.7 1642 12 178 7 no_subtype FALSE canonical NA NA 82 None 4 1 0 FALSE 0 0 NA A coding 376 1128 80 1207 PB.1224.1 chr2 + 3094 6 full-splice_match RAB10 ENST00000264710.4 3535 6 396 45 no_subtype FALSE canonical NA NA 622 None 4 3 0 FALSE 0 0 NA C coding 200 600 104 703 PB.4569.1 chr7 + 1217 5 full-splice_match AP1S1 ENST00000337619.9 1306 5 86 3 no_subtype FALSE canonical NA NA 461 None 3 6 0 FALSE 0 0 NA A coding 158 474 33 506 PB.1968.1 chr2 - 2085 5 full-splice_match PDCD1 ENST00000334409.9 2114 5 19 10 no_subtype FALSE canonical NA NA 127 None 3 13 0 FALSE 0 0 NA A coding 288 864 52 915 PB.574.2 chr1 - 1544 1 genic_intron novelGene_1001 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.574.3 chr1 - 1234 1 antisense novelGene_CAPZA1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8344.2 chr16 - 5499 15 novel_not_in_catalog TMEM8A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 891 None 2 32 3 TRUE 0 0 NA B coding 563 1689 2632 4320 PB.8344.3 chr16 - 2981 11 incomplete-splice_match TMEM8A ENST00000431232.6 3691 13 634 76 5prime_fragment FALSE canonical NA NA 34 None 2 13 0 FALSE 0 0 NA B coding 578 1734 107 1840 PB.8632.1 chr16 + 2552 17 novel_not_in_catalog RSPRY1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2404 None 5 3 0 TRUE 0 0 NA B coding 537 1611 888 2498 PB.2293.1 chr3 - 3578 18 novel_not_in_catalog TMF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 347 None 2 3 0 TRUE 0 0 NA B coding 1093 3279 206 3484 PB.8339.1 chr16 + 892 4 novel_not_in_catalog HBA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 654 None 2 3 1 TRUE 0 0 NA A coding 223 669 112 780 PB.4097.2 chr6 - 3957 3 novel_not_in_catalog TSPYL4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2797 None 6 20 1 FALSE 0 0 NA B coding 414 1242 58 1299 PB.4097.1 chr6 - 4010 3 novel_not_in_catalog TSPYL4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2848 None 7 23 2 FALSE 0 0 NA B coding 414 1242 109 1350 PB.6118.1 chr11 + 456 5 full-splice_match RPLP2 ENST00000321153.8 781 5 321 4 no_subtype FALSE canonical NA NA 344 None 2 2 0 FALSE 0 0 NA A coding 115 345 74 418 PB.863.1 chr1 - 2095 3 full-splice_match MYOC ENST00000037502.10 2095 3 -4 4 no_subtype FALSE canonical NA NA 680 None 6 3 0 FALSE 0 0 NA A coding 504 1512 77 1588 PB.2489.1 chr3 - 6054 34 full-splice_match STAG1 ENST00000383202.6 6055 34 -10 11 no_subtype FALSE canonical NA NA 184 None 16 17 0 FALSE 0 0 NA A coding 1258 3774 268 4041 PB.7301.1 chr12 - 2654 1 antisense novelGene_BICDL1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2406.2 chr3 - 1497 11 full-splice_match GSK3B ENST00000264235.12 7711 11 825 5389 no_subtype FALSE canonical NA NA 246 None 2 1 0 FALSE 0 0 NA A coding 420 1260 159 1418 PB.1164.1 chr1 + 3880 12 novel_not_in_catalog NLRP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 3184 None 5 9 0 TRUE 0 0 NA A coding 1034 3102 180 3281 PB.7965.1 chr15 + 1324 10 full-splice_match SNRPN ENST00000390687.8 1528 10 62 142 no_subtype FALSE canonical NA NA 1149 None 50 0 0 FALSE 0 0 NA A coding 240 720 465 1184 PB.2197.2 chr3 + 1992 19 novel_not_in_catalog APEH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1730 None 2 0 0 TRUE 0 0 NA B coding 313 939 895 1833 PB.2445.3 chr3 - 3623 14 novel_not_in_catalog OSBPL11 novel NA NA NA NA no_subtype TRUE canonical NA NA 699 None 5 6 0 TRUE 0 0 NA B coding 747 2241 536 2776 PB.675.1 chr1 - 1362 6 full-splice_match VPS72 ENST00000368892.8 1527 6 6 159 no_subtype FALSE canonical NA NA 203 None 15 1 0 FALSE 0 0 NA A coding 364 1092 87 1178 PB.3267.1 chr5 + 5541 1 genic_intron novelGene_553 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7311.1 chr12 - 1498 7 full-splice_match COQ5 ENST00000288532.10 1535 7 27 10 no_subtype TRUE canonical NA NA 216 None 9 0 0 FALSE 0 0 NA A coding 307 921 75 995 PB.1945.1 chr2 + 1854 1 antisense novelGene_PER2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7090.1 chr12 - 3825 15 novel_not_in_catalog GNS novel NA NA NA NA no_subtype TRUE canonical NA NA 351 None 82 16 0 TRUE 0 0 NA B coding 552 1656 160 1815 PB.7234.1 chr12 + 1686 1 novel_in_catalog ACACB novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9404.4 chr17 + 3145 16 novel_not_in_catalog TMC8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2621 None 2 12 0 TRUE 0 0 NA B coding 450 1350 362 1711 PB.27.2 chr1 - 861 5 novel_not_in_catalog RPL22 novel NA NA NA NA no_subtype FALSE canonical NA NA 35 None 6 6 0 TRUE 0 0 NA B coding 128 384 24 407 PB.27.3 chr1 - 1692 1 incomplete-splice_match RPL22 ENST00000234875.8 2078 4 371 16 no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7067.1 chr12 - 3025 21 novel_not_in_catalog AVIL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 106 None 2 5 0 TRUE 0 0 NA A coding 819 2457 126 2582 PB.1238.1 chr2 - 2230 10 full-splice_match PPM1G ENST00000344034.4 2311 10 67 14 no_subtype FALSE canonical NA NA 318 None 13 5 0 FALSE 0 0 NA A coding 546 1638 199 1836 PB.9120.4 chr17 + 2754 1 novel_in_catalog EIF1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 33 9 0 FALSE 0 0 NA C coding 76 228 154 381 PB.9120.3 chr17 + 2006 3 novel_in_catalog EIF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1158 None 13 6 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.9120.2 chr17 + 2607 2 full-splice_match EIF1 ENST00000586699.1 572 2 -1018 -1017 no_subtype FALSE canonical NA NA 1057 None 6 7 0 FALSE 0 0 NA C coding 76 228 155 382 PB.9120.1 chr17 + 674 4 full-splice_match EIF1 ENST00000469257.1 2330 4 -7 1663 no_subtype FALSE canonical NA NA 450 None 160 2 0 FALSE 0 0 NA C coding 113 339 154 492 PB.6883.1 chr12 + 1821 8 full-splice_match MRPS35 ENST00000081029.7 1888 8 64 3 no_subtype FALSE canonical NA NA 709 None 13 3 0 FALSE 0 0 NA A coding 323 969 8 976 PB.7471.2 chr13 - 3179 16 full-splice_match LCP1 ENST00000323076.6 3787 16 163 445 no_subtype FALSE canonical NA NA 51 None 654 6 0 FALSE 0 0 NA C coding 627 1881 76 1956 PB.3956.2 chr6 - 1586 13 novel_not_in_catalog PLA2G7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 122 None 2 15 1 TRUE 0 0 NA C coding 409 1227 329 1555 PB.86.5 chr1 + 1702 4 novel_not_in_catalog SZRD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 370 None 3 4 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.2111.1 chr3 + 807 6 full-splice_match RPL14 ENST00000338970.10 7072 6 47 6218 no_subtype FALSE canonical NA NA 376 None 13 1 0 FALSE 0 0 NA A coding 215 645 23 667 PB.7471.4 chr13 - 1503 1 incomplete-splice_match LCP1 ENST00000323076.6 3787 16 2282 3 no_subtype FALSE canonical NA NA NA None 12 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7513.1 chr13 + 2578 16 novel_not_in_catalog TDRD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2320 None 25 4 0 TRUE 0 0 NA B coding 744 2232 77 2308 PB.8200.1 chr15 + 2912 9 novel_not_in_catalog PML novel NA NA NA NA no_subtype FALSE canonical NA NA 1764 None 80 3 1 TRUE 0 0 NA C coding 614 1842 23 1864 PB.6489.2 chr11 + 2631 20 full-splice_match TCIRG1 ENST00000265686.7 2677 20 44 2 no_subtype FALSE canonical NA NA 2478 None 183 1 1 FALSE 0 0 NA C coding 830 2490 65 2554 PB.6489.3 chr11 + 3192 18 novel_in_catalog TCIRG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3039 None 6 6 1 FALSE 0 0 NA C coding 531 1593 1042 2634 PB.6489.4 chr11 + 2840 20 novel_not_in_catalog TCIRG1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2688 None 4 11 2 TRUE 0 0 NA C coding 747 2241 111 2351 PB.6489.5 chr11 + 2890 20 novel_not_in_catalog TCIRG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2739 None 2 34 3 TRUE 0 0 NA C coding 614 1842 974 2815 PB.10411.1 chr20 + 1272 13 full-splice_match DNTTIP1 ENST00000372622.7 1290 13 0 18 no_subtype FALSE canonical NA NA 919 None 4 1 0 FALSE 0 0 NA A coding 329 987 69 1055 PB.6489.7 chr11 + 2732 20 novel_not_in_catalog TCIRG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2579 None 2 9 1 TRUE 0 0 NA C coding 755 2265 80 2344 PB.1218.5 chr2 + 3397 12 incomplete-splice_match NCOA1 ENST00000288599.9 6952 22 1368 2187 internal_fragment FALSE canonical NA NA 3102 None 3 2 1 FALSE 0 0 NA B coding 1019 3057 31 3087 PB.707.11 chr1 - 6359 17 novel_not_in_catalog ADAR novel NA NA NA NA no_subtype FALSE canonical NA NA 194 None 3 23 0 TRUE 0 0 NA B coding 1226 3678 180 3857 PB.11016.1 chrX + 3312 3 full-splice_match FOXO4 ENST00000374259.7 3301 3 -21 10 no_subtype FALSE canonical NA NA 1863 None 7 10 0 FALSE 0 0 NA A coding 505 1515 354 1868 PB.3956.1 chr6 - 1632 12 full-splice_match PLA2G7 ENST00000274793.11 1882 12 -81 331 no_subtype FALSE canonical NA NA 244 None 27 1 0 FALSE 0 0 NA C coding 441 1323 279 1601 PB.10282.1 chr20 + 1436 4 full-splice_match DSTN ENST00000246069.11 3617 4 258 1923 no_subtype FALSE canonical NA NA 476 None 279 8 0 FALSE 0 0 NA A coding 165 495 89 583 PB.707.15 chr1 - 5627 4 novel_in_catalog ADAR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2441 None 2 33 0 FALSE 0 0 NA B coding 255 765 2153 2917 PB.707.16 chr1 - 2617 2 novel_in_catalog ADAR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 215 None 9 7 0 FALSE 0 0 NA B coding 534 1602 201 1802 PB.3743.1 chr6 + 5499 6 incomplete-splice_match HIVEP1 ENST00000379388.6 9027 9 3525 3 internal_fragment FALSE canonical NA NA 3785 None 4 4 0 FALSE 0 0 NA A coding 1615 4845 117 4961 PB.241.1 chr1 + 1384 1 incomplete-splice_match ZNF362 ENST00000373428.5 2936 8 1551 2 no_subtype FALSE canonical NA NA NA None 3 3 0 FALSE 0 0 NA A coding 150 450 382 831 PB.847.3 chr1 + 2948 12 full-splice_match DCAF6 ENST00000470721.5 2803 12 23 -168 no_subtype FALSE canonical NA NA 1717 None 2 15 2 FALSE 0 0 NA C coding 472 1416 217 1632 PB.5554.1 chr9 + 4319 5 novel_not_in_catalog LRRC8A novel NA NA NA NA no_subtype TRUE canonical NA NA 2383 None 2 12 0 TRUE 0 0 NA A coding 810 2430 227 2656 PB.793.5 chr1 - 3239 8 novel_not_in_catalog CD84 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 86 None 4 26 3 TRUE 0 0 NA C coding 313 939 58 996 PB.6298.1 chr11 + 2685 12 full-splice_match CREB3L1 ENST00000621158.4 2687 12 -1 3 no_subtype FALSE canonical NA NA 1975 None 7 3 0 FALSE 0 0 NA C coding 519 1557 453 2009 PB.6506.11 chr11 - 7271 26 novel_in_catalog NUMA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 234 None 6 4 0 FALSE 0 0 NA B coding 2115 6345 267 6611 PB.793.6 chr1 - 6558 5 novel_in_catalog CD84 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 77 None 4 25 0 FALSE 0 0 NA C coding 280 840 32 871 PB.7846.1 chr14 + 1856 3 novel_not_in_catalog GPR65 novel NA NA NA NA no_subtype FALSE canonical NA NA 88 None 8 4 0 TRUE 0 0 NA A coding 337 1011 545 1555 PB.5204.1 chr9 - 3078 1 genic_intron novelGene_27 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 30 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10651.1 chr22 - 3252 1 antisense novelGene_CRKL_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6703.47 chr11 - 3031 1 antisense novelGene_SORL1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6703.45 chr11 + 5957 1 novel_in_catalog SORL1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 29 0 FALSE 0 0 NA B coding 129 387 3660 4046 PB.7465.1 chr13 - 839 6 full-splice_match TPT1 ENST00000530705.5 4735 6 187 3709 no_subtype FALSE canonical NA NA 142 None 49 3 0 FALSE 0 0 NA A coding 172 516 115 630 PB.4044.6 chr6 - 2860 4 novel_not_in_catalog PNISR novel NA NA NA NA no_subtype FALSE canonical NA NA 76 None 4 15 0 TRUE 0 0 NA C coding 101 303 1846 2148 PB.4044.5 chr6 - 1609 1 novel_in_catalog PNISR novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2105.2 chr3 - 3131 5 full-splice_match CSRNP1 ENST00000273153.9 3148 5 14 3 no_subtype TRUE canonical NA NA 124 None 48 8 0 FALSE 0 0 NA A coding 589 1767 165 1931 PB.4044.3 chr6 - 3037 12 novel_not_in_catalog PNISR novel NA NA NA NA no_subtype TRUE canonical NA NA 52 None 2 11 1 TRUE 0 0 NA C coding 250 750 2286 3035 PB.4044.2 chr6 - 2929 13 novel_not_in_catalog PNISR novel NA NA NA NA no_subtype FALSE canonical NA NA 61 None 2 1 0 FALSE 0 0 NA C coding 814 2442 173 2614 PB.4044.1 chr6 - 1689 12 full-splice_match PNISR ENST00000369239.9 5112 12 -7 3430 no_subtype FALSE canonical NA NA 101 None 32 0 0 FALSE 0 0 NA C coding 492 1476 213 1688 PB.4521.1 chr7 + 3701 2 antisense novelGene_SLC25A13_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 255 None 3 20 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5688.1 chr10 + 1749 14 full-splice_match HSPA14 ENST00000378372.7 1904 14 152 3 no_subtype TRUE canonical NA NA 1538 None 6 0 0 FALSE 0 0 NA A coding 509 1527 88 1614 PB.3638.1 chr5 - 2952 1 genic_intron novelGene_1303 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.113 chr14 - 1501 8 fusion IGHA1,IGHV1-3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 100 None 2 17 2 TRUE 0 0 NA B coding 254 762 695 1456 PB.374.1 chr1 + 2998 11 full-splice_match PODN ENST00000312553.9 3010 11 1 11 no_subtype FALSE canonical NA NA 2019 None 33 11 0 FALSE 0 0 NA A coding 613 1839 151 1989 PB.10419.1 chr20 - 4436 28 novel_not_in_catalog ZNF335 novel NA NA NA NA no_subtype TRUE canonical NA NA 64 None 4 2 0 FALSE 0 0 NA A coding 1341 4023 115 4137 PB.9156.1 chr17 - 2664 3 full-splice_match MEOX1 ENST00000318579.8 2707 3 32 11 no_subtype FALSE canonical NA NA 857 None 3 6 0 FALSE 0 0 NA A coding 254 762 389 1150 PB.8246.1 chr15 + 1337 3 full-splice_match TMED3 ENST00000299705.9 1475 3 125 13 no_subtype FALSE canonical NA NA 480 None 27 5 0 FALSE 0 0 NA A coding 217 651 64 714 PB.6007.1 chr10 + 3245 11 full-splice_match TAF5 ENST00000369839.3 3268 11 12 11 no_subtype FALSE canonical NA NA 2196 None 7 9 1 FALSE 0 0 NA A coding 800 2400 12 2411 PB.10316.3 chr20 + 3724 18 novel_not_in_catalog TM9SF4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1765 None 6 10 0 TRUE 0 0 NA B coding 625 1875 38 1912 PB.10290.2 chr20 + 3004 4 genic_intron novelGene_185 novel NA NA NA NA no_subtype FALSE canonical NA NA 302 None 3 17 3 FALSE 0 0 NA B coding 153 459 2017 2475 PB.9575.1 chr18 + 7173 28 novel_not_in_catalog WDR7 novel NA NA NA NA no_subtype FALSE canonical NA NA 4390 None 4 9 1 TRUE 0 0 NA A coding 1457 4371 221 4591 PB.6290.5 chr11 + 2771 8 novel_not_in_catalog CD82 novel NA NA NA NA no_subtype FALSE canonical NA NA 480 None 2 17 0 TRUE 0 0 NA B coding 182 546 145 690 PB.6290.6 chr11 + 2761 2 genic CD82 novel NA NA NA NA no_subtype FALSE canonical NA NA 1463 None 2 20 1 TRUE 0 0 NA B coding 147 441 6 446 PB.5513.1 chr9 + 2828 2 full-splice_match ZBTB43 ENST00000450858.1 710 2 0 -2118 no_subtype FALSE canonical NA NA 100 None 7 5 0 FALSE 0 0 NA C coding 467 1401 124 1524 PB.6290.1 chr11 + 1895 12 novel_not_in_catalog CD82 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1344 None 53 9 1 TRUE 0 0 NA B coding 267 801 175 975 PB.6290.2 chr11 + 2011 12 novel_not_in_catalog CD82 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1462 None 3 13 1 TRUE 0 0 NA B coding 267 801 293 1093 PB.6290.3 chr11 + 2014 12 novel_not_in_catalog CD82 novel NA NA NA NA no_subtype FALSE canonical NA NA 1462 None 6 11 1 TRUE 0 0 NA B coding 267 801 304 1104 PB.9509.1 chr18 + 3830 2 genic_intron novelGene_212 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 474 None 2 30 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8145.1 chr15 - 2931 13 full-splice_match CSNK1G1 ENST00000634654.1 2485 13 -92 -354 no_subtype FALSE canonical NA NA 176 None 2 8 0 FALSE 0 0 NA C coding 442 1326 452 1777 PB.2471.2 chr3 - 1635 15 novel_not_in_catalog MRPL3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 231 None 2 8 3 TRUE 0 0 NA B coding 348 1044 140 1183 PB.10976.1 chrX - 2870 1 antisense novelGene_CLCN5_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 79 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.394.1 chr1 + 1572 2 genic GYG1P3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 696 None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8058.1 chr15 + 2783 3 novel_not_in_catalog B2M novel NA NA NA NA no_subtype FALSE canonical NA NA 2454 None 103 16 0 FALSE 0 0 NA C coding 122 366 19 384 PB.8058.2 chr15 + 901 5 novel_not_in_catalog B2M novel NA NA NA NA no_subtype FALSE canonical NA NA 568 None 647 5 0 FALSE 0 0 NA C coding 119 357 10 366 PB.8058.3 chr15 + 1379 2 novel_not_in_catalog B2M novel NA NA NA NA no_subtype FALSE canonical NA NA 1332 None 2 13 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.8058.4 chr15 + 1543 4 novel_not_in_catalog B2M novel NA NA NA NA no_subtype FALSE canonical NA NA 1204 None 9 9 0 FALSE 0 0 NA C coding 122 366 19 384 PB.8058.5 chr15 + 1051 1 full-splice_match B2M ENST00000632133.1 2403 1 -828 2180 no_subtype FALSE canonical NA NA NA None 137 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8058.6 chr15 + 3219 4 novel_not_in_catalog B2M novel NA NA NA NA no_subtype FALSE canonical NA NA 1827 None 12 20 0 FALSE 0 0 NA C coding 119 357 19 375 PB.8058.7 chr15 + 1858 2 novel_not_in_catalog B2M novel NA NA NA NA no_subtype FALSE canonical NA NA 1529 None 5 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3687.1 chr5 + 2887 7 novel_in_catalog ZNF354B novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2374 None 2 13 0 FALSE 0 0 NA A coding 612 1836 189 2024 PB.2642.5 chr3 + 3085 17 novel_not_in_catalog SENP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1782 None 2 8 0 TRUE 0 0 NA C coding 509 1527 316 1842 PB.1222.4 chr2 - 7175 16 novel_not_in_catalog ASXL2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 322 None 5 17 2 TRUE 0 0 NA B coding 1435 4305 266 4570 PB.1222.5 chr2 - 4270 4 genic_intron novelGene_251 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 425 None 2 41 3 FALSE 0 0 NA A coding 67 201 154 354 PB.6902.2 chr12 - 2875 13 full-splice_match PKP2 ENST00000340811.8 4302 13 73 1354 no_subtype FALSE canonical NA NA 259 None 32 0 0 FALSE 0 0 NA A coding 837 2511 37 2547 PB.1222.3 chr2 - 6769 13 novel_not_in_catalog ASXL2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 108 None 2 16 2 TRUE 0 0 NA B coding 1377 4131 31 4161 PB.1590.1 chr2 - 2985 1 full-splice_match WTH3DI ENST00000623617.2 3032 1 -18 65 no_subtype FALSE canonical NA NA NA None 128 20 0 FALSE 0 0 NA A coding 254 762 441 1202 PB.9992.12 chr19 - 4304 12 novel_not_in_catalog FCGBP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 59 None 4 5 0 TRUE 0 0 NA B coding 1147 3441 700 4140 PB.9992.13 chr19 - 3817 10 novel_not_in_catalog FCGBP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 113 None 10 0 0 TRUE 0 0 NA B coding 1093 3279 376 3654 PB.9992.10 chr19 - 4757 13 incomplete-splice_match FCGBP ENST00000616721.4 12787 28 8027 3 5prime_fragment FALSE canonical NA NA 169 None 17 0 0 FALSE 0 0 NA B coding 1474 4422 172 4593 PB.9992.11 chr19 - 4042 11 novel_not_in_catalog FCGBP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 134 None 4 2 0 TRUE 0 0 NA B coding 1186 3558 321 3878 PB.9992.16 chr19 - 4349 12 novel_not_in_catalog FCGBP novel NA NA NA NA no_subtype TRUE canonical NA NA 113 None 36 0 0 TRUE 0 0 NA B coding 1186 3558 638 4195 PB.2642.7 chr3 + 1563 1 genic_intron novelGene_1349 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9992.14 chr19 - 4057 11 novel_not_in_catalog FCGBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 141 None 5 3 1 TRUE 0 0 NA B coding 1189 3567 328 3894 PB.2968.1 chr4 - 1495 9 full-splice_match ADH5 ENST00000296412.12 2615 9 -54 1174 no_subtype FALSE canonical NA NA 117 None 77 4 0 FALSE 0 0 NA A coding 374 1122 106 1227 PB.5239.2 chr9 + 5766 43 novel_not_in_catalog FOCAD novel NA NA NA NA no_subtype FALSE canonical NA NA 5369 None 2 4 1 FALSE 0 0 NA B coding 1380 4140 34 4173 PB.6601.2 chr11 - 3271 15 full-splice_match MTMR2 ENST00000346299.9 4681 15 189 1221 no_subtype FALSE canonical NA NA 232 None 22 8 0 FALSE 0 0 NA C coding 643 1929 153 2081 PB.9937.1 chr19 + 1609 7 novel_in_catalog MAG novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1101 None 5 5 0 FALSE 0 0 NA A coding 338 1014 73 1086 PB.5239.1 chr9 + 5803 45 novel_not_in_catalog FOCAD novel NA NA NA NA no_subtype TRUE canonical NA NA 5421 None 7 1 1 TRUE 0 0 NA B coding 1380 4140 86 4225 PB.879.2 chr1 - 2750 1 antisense novelGene_RABGAP1L_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.879.1 chr1 - 3021 2 antisense novelGene_RABGAP1L_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2494 None 53 20 1 FALSE 0 0 NA B coding 99 297 1636 1932 PB.6123.1 chr11 - 1374 13 full-splice_match CHID1 ENST00000323578.12 3374 13 630 1370 no_subtype FALSE canonical NA NA 57 None 9 0 0 FALSE 0 0 NA A coding 393 1179 101 1279 PB.8403.1 chr16 - 6377 21 novel_not_in_catalog NLRC3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 245 None 2 31 2 TRUE 0 0 NA B coding 1065 3195 414 3608 PB.8403.2 chr16 - 6446 22 novel_not_in_catalog NLRC3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 248 None 3 34 2 TRUE 0 0 NA B coding 1065 3195 483 3677 PB.8403.3 chr16 - 6413 22 novel_not_in_catalog NLRC3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 225 None 2 61 2 TRUE 0 0 NA B coding 1065 3195 456 3650 PB.449.5 chr1 + 2783 1 incomplete-splice_match PRKACB ENST00000394839.6 4200 11 1408 10 no_subtype FALSE canonical NA NA NA None 6 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6601.1 chr11 - 3314 16 full-splice_match MTMR2 ENST00000352297.11 3350 16 1 35 no_subtype FALSE canonical NA NA 225 None 12 15 3 FALSE 0 0 NA C coding 571 1713 433 2145 PB.449.3 chr1 + 4301 9 novel_in_catalog PRKACB novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 986 None 2 13 0 FALSE 0 0 NA C coding 357 1071 39 1109 PB.449.2 chr1 + 4091 10 full-splice_match PRKACB ENST00000370685.7 4481 10 41 349 no_subtype FALSE canonical NA NA 1121 None 46 7 0 FALSE 0 0 NA C coding 398 1194 51 1244 PB.449.1 chr1 + 4510 10 full-splice_match PRKACB ENST00000370689.6 4513 10 -7 10 no_subtype FALSE canonical NA NA 1201 None 2 12 0 FALSE 0 0 NA C coding 351 1053 272 1324 PB.3046.1 chr4 + 1958 15 incomplete-splice_match NAA15 ENST00000398947.1 6072 20 51 4063 3prime_fragment FALSE canonical NA NA 1892 None 7 0 0 FALSE 0 0 NA C coding 606 1818 140 1957 PB.7863.3 chr14 - 2015 12 full-splice_match TC2N ENST00000360594.9 3751 12 -127 1863 no_subtype FALSE canonical NA NA 204 None 2 6 0 FALSE 0 0 NA C coding 490 1470 261 1730 PB.4535.3 chr7 + 3004 3 novel_in_catalog ZNF655 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2164 None 3 4 0 FALSE 0 0 NA C coding 131 393 1966 2358 PB.4535.1 chr7 + 1777 4 full-splice_match ZNF655 ENST00000467680.5 1979 4 199 3 no_subtype FALSE canonical NA NA 937 None 2 2 0 FALSE 0 0 NA C coding 131 393 739 1131 PB.11146.1 chrX - 3732 25 full-splice_match SMARCA1 ENST00000371121.4 3564 25 -85 -83 no_subtype FALSE canonical NA NA 294 None 3 1 0 FALSE 0 0 NA A coding 1070 3210 121 3330 PB.2201.2 chr3 + 999 2 full-splice_match FAM212A ENST00000333323.4 1040 2 35 6 no_subtype FALSE canonical NA NA 155 None 4 1 0 FALSE 0 0 NA A coding 287 861 99 959 PB.2654.7 chr3 + 3568 8 novel_in_catalog EIF4A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 805 None 2 22 0 FALSE 0 0 NA C coding 314 942 35 976 PB.8935.1 chr17 + 2879 7 full-splice_match COX10 ENST00000261643.7 2873 7 -5 -1 no_subtype FALSE canonical NA NA 1010 None 51 12 0 FALSE 0 0 NA A coding 443 1329 83 1411 PB.4993.1 chr8 - 639 4 full-splice_match FABP4 ENST00000256104.4 941 4 30 272 no_subtype FALSE canonical NA NA 139 None 11 1 0 FALSE 0 0 NA A coding 132 396 67 462 PB.10311.1 chr20 + 3835 1 genic_intron novelGene_307 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7531.12 chr13 - 5604 31 novel_not_in_catalog MYCBP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 2 8 0 TRUE 0 0 NA B coding 1713 5139 466 5604 PB.2566.2 chr3 - 1216 8 novel_not_in_catalog PDCD10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 71 None 2 3 0 TRUE 0 0 NA C coding 210 630 187 816 PB.5374.2 chr9 + 5466 16 novel_in_catalog FGD3 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 4558 None 8 17 0 FALSE 0 0 NA C coding 458 1374 563 1936 PB.7206.8 chr12 + 2751 1 genic_intron novelGene_947 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA B coding 135 405 2078 2482 PB.7206.9 chr12 + 3626 2 genic_intron novelGene_948 novel NA NA NA NA no_subtype TRUE canonical NA NA 2193 None 12 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3999.1 chr6 - 3070 1 genic_intron novelGene_709 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 30 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7206.7 chr12 + 6188 2 genic_intron novelGene_947 novel NA NA NA NA no_subtype FALSE canonical NA NA 415 None 2 33 0 FALSE 0 0 NA B coding 135 405 5515 5919 PB.7206.4 chr12 + 3125 1 novel_in_catalog CHST11 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 14 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7206.5 chr12 + 3119 2 novel_not_in_catalog CHST11 novel NA NA NA NA no_subtype FALSE canonical NA NA 2497 None 2 16 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.7206.2 chr12 + 2546 3 genic_intron novelGene_946 novel NA NA NA NA no_subtype FALSE canonical NA NA 1413 None 6 13 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.8623.1 chr16 - 2720 17 full-splice_match BBS2 ENST00000245157.9 2963 17 235 8 no_subtype FALSE canonical NA NA 303 None 17 3 0 FALSE 0 0 NA A coding 721 2163 187 2349 PB.455.2 chr1 - 2665 14 novel_not_in_catalog MCOLN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 263 None 33 8 1 FALSE 0 0 NA B coding 253 759 187 945 PB.7206.1 chr12 + 1612 3 full-splice_match CHST11 ENST00000303694.5 5709 3 189 3908 no_subtype FALSE canonical NA NA 454 None 2 1 0 FALSE 0 0 NA C coding 352 1056 251 1306 PB.11161.1 chrX + 4410 11 full-splice_match PHF6 ENST00000370803.7 4489 11 72 7 no_subtype FALSE canonical NA NA 1287 None 4 7 0 FALSE 0 0 NA C coding 365 1095 190 1284 PB.11161.2 chrX + 2559 11 novel_not_in_catalog PHF6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1273 None 5 3 0 FALSE 0 0 NA C coding 365 1095 176 1270 PB.2560.1 chr3 + 4206 1 antisense novelGene_KPNA4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 42 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3759.2 chr6 - 2869 2 incomplete-splice_match ATXN1 ENST00000436367.5 10587 8 1702 6016 5prime_fragment FALSE canonical NA NA 1137 None 2 13 0 FALSE 0 0 NA B coding 540 1620 46 1665 PB.10194.2 chr19 + 2907 4 novel_not_in_catalog ZNF587 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2436 None 10 19 1 TRUE 0 0 NA A coding 575 1725 127 1851 PB.7190.1 chr12 + 3080 11 novel_in_catalog GAS2L3 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 1092 None 2 7 0 FALSE 0 0 NA A coding 694 2082 337 2418 PB.1780.2 chr2 + 2803 9 novel_not_in_catalog MOB4 novel NA NA NA NA no_subtype FALSE canonical NA NA 681 None 2 13 1 TRUE 0 0 NA C coding 226 678 15 692 PB.6592.4 chr11 - 3903 15 novel_not_in_catalog MRE11A novel NA NA NA NA no_subtype FALSE canonical NA NA 53 None 3 10 0 TRUE 0 0 NA B coding 539 1617 159 1775 PB.2444.1 chr3 - 2514 14 full-splice_match SNX4 ENST00000251775.8 2513 14 -4 3 no_subtype FALSE canonical NA NA 170 None 2 6 0 FALSE 0 0 NA C coding 450 1350 30 1379 PB.6592.1 chr11 - 2613 21 novel_not_in_catalog MRE11A novel NA NA NA NA no_subtype FALSE canonical NA NA 151 None 9 4 0 TRUE 0 0 NA B coding 708 2124 257 2380 PB.10319.1 chr20 + 1587 7 full-splice_match POFUT1 ENST00000375749.7 5235 7 19 3629 no_subtype FALSE canonical NA NA 1021 None 2 1 0 FALSE 0 0 NA C coding 388 1164 44 1207 PB.10319.2 chr20 + 4592 8 novel_not_in_catalog POFUT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3176 None 4 17 1 TRUE 0 0 NA C coding 388 1164 44 1207 PB.8155.1 chr15 - 3914 9 full-splice_match CILP ENST00000261883.5 5695 9 19 1762 no_subtype FALSE canonical NA NA 42 None 38 4 0 FALSE 0 0 NA A coding 1184 3552 149 3700 PB.1889.1 chr2 - 3238 2 full-splice_match FAM124B ENST00000409685.3 2509 2 -16 -713 no_subtype FALSE canonical NA NA 1014 None 2 10 0 FALSE 0 0 NA A coding 455 1365 283 1647 PB.8972.1 chr17 + 2717 3 genic_intron novelGene_177 novel NA NA NA NA no_subtype FALSE canonical NA NA 1625 None 15 15 2 FALSE 0 0 NA A coding 154 462 1610 2071 PB.9927.1 chr19 + 3286 7 novel_not_in_catalog ZNF302 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3007 None 2 29 3 TRUE 0 0 NA A coding 329 987 452 1438 PB.327.1 chr1 + 1459 10 full-splice_match DMAP1 ENST00000372289.6 1730 10 257 14 no_subtype FALSE canonical NA NA 1350 None 27 0 0 FALSE 0 0 NA A coding 467 1401 7 1407 PB.8810.1 chr16 - 2004 1 incomplete-splice_match ANKRD11 ENST00000562275.5 2762 6 756 3 no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10218.1 chr20 - 2523 2 full-splice_match SRXN1 ENST00000381962.3 2698 2 158 17 no_subtype FALSE canonical NA NA 237 None 4 8 0 FALSE 0 0 NA A coding 137 411 28 438 PB.423.4 chr1 - 1385 8 full-splice_match SERBP1 ENST00000370995.6 3482 8 -1 2098 no_subtype FALSE canonical NA NA 400 None 3 1 0 FALSE 0 0 NA C coding 408 1224 88 1311 PB.6435.1 chr11 + 1218 1 full-splice_match MALAT1 ENST00000534336.1 8708 1 3841 3649 no_subtype FALSE canonical NA NA NA None 134 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.946.8 chr1 + 2626 8 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 373 None 4 10 1 TRUE 0 0 NA B coding 112 336 193 528 PB.10129.2 chr19 + 1692 9 full-splice_match NR1H2 ENST00000411902.6 1466 9 14 -240 no_subtype FALSE canonical NA NA 1176 None 2 4 0 FALSE 0 0 NA C coding 363 1089 232 1320 PB.946.5 chr1 + 2967 29 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2922 None 59 5 1 TRUE 0 0 NA B coding 925 2775 193 2967 PB.946.4 chr1 + 2850 26 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2804 None 5 8 3 TRUE 0 0 NA B coding 909 2727 123 2849 PB.1908.3 chr2 + 2959 26 novel_not_in_catalog SP100 novel NA NA NA NA no_subtype FALSE canonical NA NA 2050 None 3 6 0 TRUE 0 0 NA B coding 832 2496 92 2587 PB.7354.1 chr12 + 2074 4 full-splice_match TMED2 ENST00000262225.7 2560 4 43 443 no_subtype FALSE canonical NA NA 544 None 85 6 0 FALSE 0 0 NA A coding 201 603 64 666 PB.946.1 chr1 + 2822 28 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2777 None 10 8 2 TRUE 0 0 NA B coding 877 2631 192 2822 PB.10129.1 chr19 + 1970 10 full-splice_match NR1H2 ENST00000253727.9 1998 10 17 11 no_subtype FALSE canonical NA NA 1454 None 91 4 0 FALSE 0 0 NA C coding 460 1380 219 1598 PB.946.3 chr1 + 4477 33 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3389 None 6 13 0 TRUE 0 0 NA B coding 1192 3576 87 3662 PB.946.2 chr1 + 2605 27 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2566 None 132 5 0 TRUE 0 0 NA B coding 848 2544 62 2605 PB.7352.1 chr12 - 5695 33 novel_not_in_catalog SBNO1 novel NA NA NA NA no_subtype TRUE canonical NA NA 146 None 2 13 0 TRUE 0 0 NA B coding 1393 4179 147 4325 PB.5983.14 chr10 - 1959 8 novel_in_catalog MGEA5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 619 None 2 2 0 FALSE 0 0 NA C coding 334 1002 748 1749 PB.1845.26 chr2 - 5714 31 novel_in_catalog FN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 413 None 19 5 0 FALSE 0 0 NA C coding 1632 4896 266 5161 PB.9139.16 chr17 + 2066 7 novel_in_catalog MLX novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 903 None 2 13 0 FALSE 0 0 NA C coding 192 576 23 598 PB.1845.22 chr2 - 3357 20 novel_not_in_catalog FN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 264 None 2 13 1 TRUE 0 0 NA C coding 566 1698 970 2667 PB.9903.1 chr19 - 1772 3 full-splice_match LPAR2 ENST00000407877.7 1791 3 18 1 no_subtype FALSE canonical NA NA 130 None 5 3 0 FALSE 0 0 NA A coding 351 1053 131 1183 PB.4515.1 chr7 + 3570 31 novel_not_in_catalog VPS50 novel NA NA NA NA no_subtype TRUE canonical NA NA 2867 None 23 3 0 TRUE 0 0 NA A coding 964 2892 93 2984 PB.8582.1 chr16 - 2767 14 novel_not_in_catalog C16orf58 novel NA NA NA NA no_subtype FALSE canonical NA NA 324 None 25 3 0 TRUE 0 0 NA A coding 468 1404 25 1428 PB.7550.2 chr13 + 1983 1 genic_intron novelGene_892 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11095.1 chrX + 2902 7 full-splice_match PLP1 ENST00000619236.1 2896 7 -10 4 no_subtype FALSE canonical NA NA 813 None 9 4 0 FALSE 0 0 NA A coding 242 726 157 882 PB.6941.1 chr12 + 2610 13 full-splice_match CACNB3 ENST00000536187.6 1872 13 -17 -721 no_subtype FALSE canonical NA NA 1254 None 5 2 0 FALSE 0 0 NA C coding 483 1449 118 1566 PB.6305.3 chr11 - 6662 44 novel_in_catalog CKAP5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 70 None 2 6 1 FALSE 0 0 NA C coding 2032 6096 88 6183 PB.4113.4 chr6 + 3024 6 full-splice_match NCOA7 ENST00000438495.6 3133 6 103 6 no_subtype FALSE canonical NA NA 554 None 7 12 0 FALSE 0 0 NA C coding 219 657 31 687 PB.6305.1 chr11 - 6694 44 full-splice_match CKAP5 ENST00000529230.5 7121 44 -63 490 no_subtype TRUE canonical NA NA 73 None 10 3 0 FALSE 0 0 NA C coding 2032 6096 111 6206 PB.2444.3 chr3 - 1495 4 genic_intron novelGene_1090 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 223 None 3 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1179.1 chr2 + 1150 3 full-splice_match ID2 ENST00000396290.1 1362 3 75 137 no_subtype FALSE canonical NA NA 520 None 15 3 0 FALSE 0 0 NA C coding 134 402 109 510 PB.1179.2 chr2 + 1748 1 novel_in_catalog ID2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA C coding 141 423 111 533 PB.5983.12 chr10 - 2833 7 novel_not_in_catalog MGEA5 novel NA NA NA NA no_subtype FALSE canonical NA NA 155 None 3 12 0 TRUE 0 0 NA C coding 498 1494 41 1534 PB.1791.1 chr2 - 2621 7 full-splice_match KCTD18 ENST00000409157.5 2556 7 -72 7 no_subtype FALSE canonical NA NA 130 None 2 6 0 FALSE 0 0 NA A coding 426 1278 206 1483 PB.3120.9 chr4 - 3533 1 genic_intron novelGene_1294 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A coding 99 297 2244 2540 PB.10663.1 chr22 - 673 4 full-splice_match CHCHD10 ENST00000484558.2 1171 4 492 6 no_subtype FALSE canonical NA NA 118 None 3 1 0 FALSE 0 0 NA A coding 142 426 78 503 PB.2990.1 chr4 - 1549 7 full-splice_match INTS12 ENST00000451321.6 1975 7 419 7 no_subtype FALSE canonical NA NA 52 None 5 1 0 FALSE 0 0 NA A coding 462 1386 62 1447 PB.5192.22 chr9 + 6179 9 novel_in_catalog DOCK8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5086 None 2 29 0 FALSE 0 0 NA B coding 310 930 4215 5144 PB.5192.20 chr9 + 2663 4 genic DOCK8 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2583 None 2 22 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.1517.3 chr2 - 1995 7 full-splice_match RNF149 ENST00000295317.3 2458 7 6 457 no_subtype FALSE canonical NA NA 562 None 12 9 0 FALSE 0 0 NA C coding 400 1200 103 1302 PB.9412.1 chr17 - 3345 6 novel_not_in_catalog TIMP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 126 None 2 11 0 TRUE 0 0 NA A coding 143 429 228 656 PB.2544.1 chr3 + 5652 25 novel_not_in_catalog MME novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5139 None 2 16 0 TRUE 0 0 NA B coding 750 2250 174 2423 PB.2544.2 chr3 + 3525 24 novel_not_in_catalog MME novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2294 None 5 2 0 FALSE 0 0 NA B coding 750 2250 142 2391 PB.7013.9 chr12 + 5936 20 novel_not_in_catalog NCKAP1L novel NA NA NA NA no_subtype FALSE canonical NA NA 2173 None 2 12 1 FALSE 0 0 NA B coding 756 2268 14 2281 PB.1487.3 chr2 + 2089 6 novel_in_catalog ARID5A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 567 None 2 4 0 FALSE 0 0 NA C coding 526 1578 202 1779 PB.1487.2 chr2 + 2135 7 full-splice_match ARID5A ENST00000357485.7 2188 7 33 20 no_subtype FALSE canonical NA NA 615 None 6 3 0 FALSE 0 0 NA C coding 594 1782 46 1827 PB.1487.1 chr2 + 2545 6 novel_in_catalog ARID5A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1025 None 2 9 0 FALSE 0 0 NA C coding 430 1290 948 2237 PB.7013.2 chr12 + 3857 32 novel_not_in_catalog NCKAP1L novel NA NA NA NA no_subtype FALSE canonical NA NA 3327 None 2 3 1 TRUE 0 0 NA B coding 782 2346 1090 3435 PB.2444.2 chr3 - 2505 15 novel_not_in_catalog SNX4 novel NA NA NA NA no_subtype TRUE canonical NA NA 171 None 19 4 0 TRUE 0 0 NA C coding 450 1350 31 1380 PB.7013.1 chr12 + 3751 32 novel_not_in_catalog NCKAP1L novel NA NA NA NA no_subtype FALSE canonical NA NA 3229 None 176 1 0 TRUE 0 0 NA B coding 1099 3297 41 3337 PB.2580.1 chr3 - 1751 1 genic_intron novelGene_1307 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8908.1 chr17 - 2542 11 full-splice_match TP53 ENST00000269305.8 2579 11 13 24 no_subtype FALSE canonical NA NA 149 None 7 11 1 FALSE 0 0 NA A coding 393 1179 178 1356 PB.1506.2 chr2 + 3118 21 incomplete-splice_match EIF5B ENST00000289371.10 5777 24 1104 1555 internal_fragment FALSE canonical NA NA 2653 None 2 6 1 FALSE 0 0 NA B coding 877 2631 128 2758 PB.6226.1 chr11 + 4223 1 antisense novelGene_USH1C_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 36 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7702.1 chr14 + 1004 8 full-splice_match C14orf166 ENST00000261700.7 7075 8 71 6000 no_subtype FALSE canonical NA NA 674 None 5 2 0 FALSE 0 0 NA A coding 244 732 95 826 PB.10990.1 chrX - 5848 22 full-splice_match PHF8 ENST00000338154.10 6062 22 205 9 no_subtype FALSE canonical NA NA 208 None 13 9 0 FALSE 0 0 NA C coding 1024 3072 301 3372 PB.4487.1 chr7 + 3039 12 novel_in_catalog DMTF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1331 None 2 16 0 FALSE 0 0 NA B coding 407 1221 283 1503 PB.4487.2 chr7 + 3684 19 novel_not_in_catalog DMTF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2925 None 12 9 1 TRUE 0 0 NA B coding 760 2280 235 2514 PB.4487.3 chr7 + 3852 19 novel_not_in_catalog DMTF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3097 None 2 9 1 TRUE 0 0 NA B coding 494 1482 1205 2686 PB.4487.4 chr7 + 3764 19 novel_not_in_catalog DMTF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3033 None 2 19 2 TRUE 0 0 NA B coding 494 1482 1141 2622 PB.4487.5 chr7 + 2995 1 novel_in_catalog DMTF1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4487.6 chr7 + 5454 2 novel_in_catalog DMTF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 144 None 2 38 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4487.7 chr7 + 2833 7 novel_not_in_catalog DMTF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2078 None 2 17 1 TRUE 0 0 NA B coding 398 1194 474 1667 PB.2063.2 chr3 + 3217 1 genic_intron novelGene_281 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8210.1 chr15 + 1798 1 novel_in_catalog PPCDC novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A coding 164 492 123 614 PB.8989.1 chr17 + 5836 3 genic AC015688.3 novel NA NA NA NA no_subtype FALSE canonical NA NA 4772 None 2 30 2 TRUE 0 0 NA A coding 258 774 4390 5163 PB.3587.5 chr5 - 2862 20 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 167 None 3 14 2 TRUE 0 0 NA B coding 636 1908 191 2098 PB.3587.6 chr5 - 2833 20 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 186 None 6 8 2 TRUE 0 0 NA B coding 624 1872 223 2094 PB.8248.1 chr15 + 1634 6 novel_not_in_catalog ZFAND6 novel NA NA NA NA no_subtype FALSE canonical NA NA 737 None 3 4 0 FALSE 0 0 NA C coding 208 624 260 883 PB.3587.1 chr5 - 2850 19 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 131 None 2 5 1 TRUE 0 0 NA B coding 617 1851 168 2018 PB.5967.6 chr10 - 2918 13 novel_not_in_catalog ERLIN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 171 None 40 11 0 TRUE 0 0 NA B coding 346 1038 189 1226 PB.3587.3 chr5 - 2791 19 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 89 None 219 7 1 TRUE 0 0 NA B coding 636 1908 126 2033 PB.2364.1 chr3 + 4163 1 genic_intron novelGene_989 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 42 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3587.9 chr5 - 2595 18 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 63 None 5 4 0 TRUE 0 0 NA B coding 583 1749 87 1835 PB.4642.1 chr7 + 1026 6 full-splice_match ARF5 ENST00000000233.9 1103 6 68 9 no_subtype FALSE canonical NA NA 542 None 4 3 0 FALSE 0 0 NA A coding 180 540 87 626 PB.6830.1 chr12 + 3655 1 genic_intron novelGene_96 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.340.1 chr1 + 1611 7 novel_not_in_catalog AKR1A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1175 None 3 8 1 TRUE 0 0 NA C coding 119 357 109 465 PB.964.4 chr1 - 2598 10 novel_not_in_catalog PTPN7 novel NA NA NA NA no_subtype FALSE canonical NA NA 46 None 3 5 0 TRUE 0 0 NA B coding 302 906 99 1004 PB.340.3 chr1 + 1187 9 full-splice_match AKR1A1 ENST00000351829.8 1166 9 -24 3 no_subtype FALSE canonical NA NA 1031 None 4 0 0 FALSE 0 0 NA C coding 325 975 120 1094 PB.340.2 chr1 + 1218 10 novel_not_in_catalog AKR1A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1061 None 2 0 0 TRUE 0 0 NA C coding 325 975 150 1124 PB.964.1 chr1 - 2899 11 novel_not_in_catalog PTPN7 novel NA NA NA NA no_subtype FALSE canonical NA NA 58 None 14 11 0 TRUE 0 0 NA B coding 399 1197 128 1324 PB.964.3 chr1 - 2765 11 novel_not_in_catalog PTPN7 novel NA NA NA NA no_subtype FALSE canonical NA NA 58 None 52 5 0 TRUE 0 0 NA B coding 360 1080 111 1190 PB.8397.1 chr16 - 5534 10 novel_not_in_catalog MEFV novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2048 None 4 29 0 TRUE 0 0 NA B coding 481 1443 2742 4184 PB.5410.1 chr9 + 3253 3 genic ZNF189 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3188 None 2 29 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.8397.3 chr16 - 5527 11 novel_not_in_catalog MEFV novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2082 None 2 27 1 TRUE 0 0 NA B coding 481 1443 2776 4218 PB.8397.5 chr16 - 1141 2 novel_in_catalog MEFV novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 337 None 6 6 0 FALSE 0 0 NA B coding 324 972 61 1032 PB.1162.4 chr1 - 3160 6 novel_not_in_catalog ZNF669 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 140 None 2 32 1 TRUE 0 0 NA B coding 341 1023 188 1210 PB.3076.1 chr4 - 1478 1 antisense novelGene_ARHGAP10_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8774.5 chr16 - 4251 23 full-splice_match MBTPS1 ENST00000343411.7 4338 23 78 9 no_subtype FALSE canonical NA NA 94 None 59 6 0 FALSE 0 0 NA C coding 1052 3156 419 3574 PB.8774.6 chr16 - 2889 17 incomplete-splice_match MBTPS1 ENST00000343411.7 4338 23 1438 11 5prime_fragment FALSE canonical NA NA 21 None 2 5 0 FALSE 0 0 NA C coding 721 2163 52 2214 PB.6086.6 chr10 + 2751 1 genic PTPRE novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3595.11 chr5 + 4552 1 incomplete-splice_match G3BP1 ENST00000394123.7 10240 12 4245 1444 no_subtype FALSE canonical NA NA NA None 8 32 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6086.4 chr10 + 3402 20 novel_not_in_catalog PTPRE novel NA NA NA NA no_subtype FALSE canonical NA NA 1999 None 2 8 1 TRUE 0 0 NA B coding 642 1926 37 1962 PB.6086.3 chr10 + 2243 19 novel_not_in_catalog PTPRE novel NA NA NA NA no_subtype FALSE canonical NA NA 1938 None 2 2 0 FALSE 0 0 NA B coding 642 1926 85 2010 PB.6086.2 chr10 + 3534 20 novel_not_in_catalog PTPRE novel NA NA NA NA no_subtype FALSE canonical NA NA 2067 None 19 8 1 TRUE 0 0 NA B coding 642 1926 105 2030 PB.6086.1 chr10 + 3356 21 novel_not_in_catalog PTPRE novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2148 None 2 6 0 TRUE 0 0 NA B coding 700 2100 121 2220 PB.1681.2 chr2 - 2817 14 novel_not_in_catalog FASTKD1 novel NA NA NA NA no_subtype TRUE canonical NA NA 179 None 2 7 1 FALSE 0 0 NA B coding 631 1893 842 2734 PB.9824.32 chr19 + 2894 18 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2268 None 7 14 1 FALSE 0 0 NA C coding 577 1731 565 2295 PB.9824.33 chr19 + 2976 20 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2350 None 3 7 0 TRUE 0 0 NA C coding 560 1680 81 1760 PB.9824.30 chr19 + 2957 19 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2331 None 2 17 1 TRUE 0 0 NA C coding 612 1836 81 1916 PB.9824.31 chr19 + 2981 20 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2353 None 3 13 3 TRUE 0 0 NA C coding 577 1731 650 2380 PB.9824.36 chr19 + 3101 20 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2477 None 20 6 0 TRUE 0 0 NA C coding 808 2424 81 2504 PB.9824.37 chr19 + 2803 18 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2175 None 2 7 0 TRUE 0 0 NA C coding 522 1566 80 1645 PB.9824.34 chr19 + 3037 19 full-splice_match ADGRE5 ENST00000357355.7 3054 19 9 8 no_subtype FALSE canonical NA NA 2411 None 60 6 0 FALSE 0 0 NA C coding 786 2358 81 2438 PB.9824.35 chr19 + 3623 19 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2995 None 15 9 0 FALSE 0 0 NA C coding 578 1734 1289 3022 PB.9589.1 chr18 + 3180 7 novel_not_in_catalog TNFRSF11A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3110 None 4 9 2 TRUE 0 0 NA A coding 154 462 3 464 PB.519.2 chr1 + 5244 10 novel_not_in_catalog VCAM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3560 None 5 30 1 TRUE 0 0 NA C coding 739 2217 111 2327 PB.6542.1 chr11 + 2430 1 full-splice_match RP11-111M22.2 ENST00000530460.1 2462 1 25 7 no_subtype FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA A coding 210 630 489 1118 PB.4192.1 chr6 - 1619 3 genic RP1-12G14.9 novel NA NA NA NA no_subtype FALSE canonical NA NA 1587 None 2 10 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.6562.2 chr11 - 5861 11 novel_not_in_catalog GAB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 165 None 26 32 1 TRUE 0 0 NA C coding 676 2028 91 2118 PB.6562.3 chr11 - 2639 2 full-splice_match GAB2 ENST00000534823.1 568 2 -13 -2058 no_subtype FALSE canonical NA NA 139 None 3 16 0 FALSE 0 0 NA C coding 139 417 65 481 PB.10757.1 chr22 - 3530 1 genic_intron novelGene_378 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 33 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7453.1 chr13 + 1703 1 genic_intron novelGene_413 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11053.2 chrX - 3121 1 novel_in_catalog CYSLTR1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2386.1 chr3 + 2894 5 novel_not_in_catalog TIGIT novel NA NA NA NA no_subtype FALSE canonical NA NA 508 None 8 19 0 TRUE 0 0 NA A coding 244 732 8 739 PB.1070.1 chr1 + 2922 22 novel_not_in_catalog CAPN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1919 None 292 5 0 TRUE 0 0 NA B coding 375 1125 816 1940 PB.8339.18 chr16 + 619 6 novel_not_in_catalog HBA2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 592 None 9 2 1 TRUE 0 0 NA C coding 132 396 35 430 PB.1857.1 chr2 - 3055 9 novel_in_catalog TMBIM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 245 None 7 9 0 FALSE 0 0 NA C coding 137 411 1370 1780 PB.7608.18 chr14 + 1403 7 fusion TRAC,TRAV12-3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 862 None 2 1 0 TRUE 0 0 NA B coding 271 813 46 858 PB.7941.7 chr14 + 2753 5 incomplete-splice_match EIF5 ENST00000558506.1 4384 10 1619 12 internal_fragment FALSE canonical NA NA 499 None 3 24 0 FALSE 0 0 NA C coding 157 471 116 586 PB.8339.13 chr16 + 574 3 fusion HBA1,HBA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 337 None 25 1 0 FALSE 0 0 NA B coding 142 426 38 463 PB.8339.11 chr16 + 742 5 fusion HBA1,HBA2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 700 None 2 5 2 TRUE 0 0 NA B coding 142 426 38 463 PB.8339.16 chr16 + 724 2 fusion HBA1,HBA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 132 None 5 2 0 FALSE 0 0 NA B coding 143 429 38 466 PB.8339.17 chr16 + 523 3 full-splice_match HBA2 ENST00000397806.1 513 3 -14 4 no_subtype FALSE canonical NA NA 288 None 5 0 0 FALSE 0 0 NA C coding 110 330 85 414 PB.8339.14 chr16 + 573 3 fusion HBA1,HBA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 337 None 5 2 1 FALSE 0 0 NA B coding 142 426 38 463 PB.8339.15 chr16 + 575 4 fusion HBA1,HBA2 novel NA NA NA NA no_subtype TRUE canonical NA NA 337 None 2 1 0 TRUE 0 0 NA B coding 142 426 38 463 PB.8502.1 chr16 + 3002 7 novel_not_in_catalog DCTN5 novel NA NA NA NA no_subtype TRUE canonical NA NA 1871 None 34 10 0 TRUE 0 0 NA A coding 182 546 42 587 PB.7941.5 chr14 + 3079 7 novel_not_in_catalog EIF5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 829 None 2 26 0 FALSE 0 0 NA C coding 237 711 206 916 PB.2387.1 chr3 - 2798 2 novel_not_in_catalog ZBTB20 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1842 None 2 17 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.9614.1 chr18 + 1837 2 antisense novelGene_MBP_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1264 None 3 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6409.2 chr11 + 3116 17 full-splice_match RPS6KA4 ENST00000334205.8 3119 17 1 2 no_subtype FALSE canonical NA NA 2185 None 8 5 0 FALSE 0 0 NA A coding 772 2316 65 2380 PB.2461.3 chr3 - 4248 5 novel_not_in_catalog RAB43 novel NA NA NA NA no_subtype TRUE canonical NA NA 333 None 2 28 1 TRUE 0 0 NA C coding 212 636 130 765 PB.5158.2 chr8 - 1830 11 full-splice_match PUF60 ENST00000349157.10 1821 11 -17 8 no_subtype FALSE canonical NA NA 90 None 69 1 0 FALSE 0 0 NA C coding 542 1626 67 1692 PB.9898.1 chr19 - 2063 14 full-splice_match SUGP1 ENST00000247001.9 2423 14 347 13 no_subtype FALSE canonical NA NA 35 None 4 2 0 FALSE 0 0 NA A coding 645 1935 2 1936 PB.5158.1 chr8 - 1697 12 full-splice_match PUF60 ENST00000526683.5 2412 12 545 170 no_subtype FALSE canonical NA NA 35 None 53 7 2 FALSE 0 0 NA C coding 559 1677 12 1688 PB.1744.10 chr2 - 3446 9 novel_not_in_catalog SLC40A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 368 None 10 9 0 FALSE 0 0 NA B coding 531 1593 581 2173 PB.1934.1 chr2 + 2778 2 genic_intron novelGene_1417 novel NA NA NA NA no_subtype TRUE canonical NA NA 1060 None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5008.1 chr8 + 2622 1 novel_in_catalog RIPK2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2297.2 chr3 - 3945 23 novel_in_catalog FRMD4B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 101 None 3 3 0 FALSE 0 0 NA C coding 980 2940 102 3041 PB.9830.1 chr19 + 2953 13 novel_not_in_catalog CLEC17A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 999 None 6 14 2 TRUE 0 0 NA A coding 310 930 200 1129 PB.10893.3 chrX - 2887 22 full-splice_match RPS6KA3 ENST00000379565.7 7918 22 214 4817 no_subtype FALSE canonical NA NA 63 None 2 2 0 FALSE 0 0 NA A coding 728 2184 31 2214 PB.7941.1 chr14 + 3853 12 full-splice_match EIF5 ENST00000216554.7 5945 12 235 1857 no_subtype FALSE canonical NA NA 1647 None 81 39 1 FALSE 0 0 NA C coding 431 1293 442 1734 PB.3615.21 chr5 + 3365 2 novel_not_in_catalog CYFIP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2973 None 2 20 1 FALSE 0 0 NA C coding 127 381 2758 3138 PB.9057.1 chr17 + 2856 1 antisense novelGene_RFFL_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3384.5 chr5 - 1215 3 full-splice_match GLRX ENST00000505427.1 632 3 -2 -581 no_subtype TRUE canonical NA NA 269 None 2 5 1 FALSE 0 0 NA C coding 106 318 63 380 PB.3384.4 chr5 - 2907 2 full-splice_match GLRX ENST00000512469.2 473 2 -14 -2420 no_subtype FALSE canonical NA NA 270 None 6 10 0 FALSE 0 0 NA C coding 106 318 64 381 PB.3384.1 chr5 - 5991 3 novel_not_in_catalog GLRX novel NA NA NA NA no_subtype TRUE non_canonical NA NA 420 None 2 48 2 TRUE 0 0 NA C coding 101 303 4207 4509 PB.7009.2 chr12 - 1608 3 full-splice_match NFE2 ENST00000553198.1 1208 3 -51 -349 no_subtype FALSE canonical NA NA 172 None 2 2 0 FALSE 0 0 NA C coding 373 1119 229 1347 PB.7009.1 chr12 - 1717 3 full-splice_match NFE2 ENST00000435572.6 1762 3 36 9 no_subtype FALSE canonical NA NA 285 None 87 0 0 FALSE 0 0 NA C coding 373 1119 342 1460 PB.6238.1 chr11 + 1930 4 novel_not_in_catalog TMEM86A novel NA NA NA NA no_subtype FALSE canonical NA NA 394 None 4 7 0 TRUE 0 0 NA A coding 240 720 109 828 PB.5360.15 chr9 - 7181 2 novel_not_in_catalog SEMA4D novel NA NA NA NA no_subtype FALSE canonical NA NA 169 None 3 39 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.5360.14 chr9 - 7135 1 novel_in_catalog SEMA4D novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 8 42 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.985.1 chr1 + 3566 2 novel_not_in_catalog ATP2B4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 299 None 5 20 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.5360.13 chr9 - 6493 4 novel_not_in_catalog SEMA4D novel NA NA NA NA no_subtype FALSE canonical NA NA 97 None 2 38 2 TRUE 0 0 NA B coding 105 315 4685 4999 PB.99.2 chr1 - 2658 1 genic_intron novelGene_178 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3919.1 chr6 - 1674 7 full-splice_match MRPS10 ENST00000053468.3 2110 7 -10 446 no_subtype FALSE canonical NA NA 74 None 16 8 0 FALSE 0 0 NA A coding 201 603 27 629 PB.7328.2 chr12 - 2480 17 full-splice_match ANAPC5 ENST00000261819.7 2513 17 29 4 no_subtype FALSE canonical NA NA 300 None 4 1 0 FALSE 0 0 NA C coding 755 2265 94 2358 PB.9087.4 chr17 + 3449 4 incomplete-splice_match LASP1 ENST00000433206.6 4023 6 572 2 internal_fragment FALSE canonical NA NA 286 None 11 14 0 FALSE 0 0 NA C coding 131 393 65 457 PB.3140.1 chr4 + 3774 30 full-splice_match TRAPPC11 ENST00000334690.10 4552 30 37 741 no_subtype TRUE canonical NA NA 3522 None 2 3 0 FALSE 0 0 NA A coding 1133 3399 166 3564 PB.7328.5 chr12 - 3548 16 novel_in_catalog ANAPC5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 284 None 2 5 0 FALSE 0 0 NA C coding 435 1305 78 1382 PB.7521.1 chr13 + 2854 1 genic_intron novelGene_691 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 10 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3253.1 chr5 + 5857 1 genic_intron novelGene_534 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 51 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2994.1 chr4 + 3567 5 full-splice_match CYP2U1 ENST00000332884.10 4944 5 187 1190 no_subtype FALSE canonical NA NA 1544 None 7 4 0 FALSE 0 0 NA C coding 544 1632 89 1720 PB.9047.3 chr17 + 2846 1 novel_in_catalog ZNF207 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 11 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9047.1 chr17 + 2086 11 full-splice_match ZNF207 ENST00000394673.6 2124 11 25 13 no_subtype FALSE canonical NA NA 1354 None 16 1 0 FALSE 0 0 NA C coding 463 1389 124 1512 PB.10559.1 chr21 + 1555 4 antisense novelGene_DSCR3_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1514 None 5 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9047.4 chr17 + 3471 1 incomplete-splice_match ZNF207 ENST00000394670.8 13781 12 6200 4111 no_subtype FALSE canonical NA NA NA None 23 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9408.2 chr17 + 2770 12 novel_not_in_catalog PGS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2403 None 2 14 1 TRUE 0 0 NA C coding 480 1440 19 1458 PB.9408.3 chr17 + 2156 10 full-splice_match PGS1 ENST00000262764.10 2201 10 21 24 no_subtype FALSE canonical NA NA 1686 None 5 2 0 FALSE 0 0 NA C coding 556 1668 6 1673 PB.6242.1 chr11 - 1225 1 full-splice_match FANCF ENST00000327470.4 4269 1 942 2102 no_subtype FALSE canonical NA NA NA None 6 1 0 FALSE 0 0 NA A coding 374 1122 36 1157 PB.1054.1 chr1 - 1720 1 genic_intron novelGene_1400 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1960.3 chr2 + 3211 13 full-splice_match SEPT2 ENST00000391971.6 3315 13 98 6 no_subtype FALSE canonical NA NA 1156 None 350 22 0 FALSE 0 0 NA C coding 361 1083 42 1124 PB.8693.1 chr16 - 3071 15 full-splice_match ESRP2 ENST00000473183.6 3793 15 436 286 no_subtype FALSE canonical NA NA 301 None 20 8 0 FALSE 0 0 NA A coding 717 2151 104 2254 PB.7593.1 chr14 - 1305 11 full-splice_match OSGEP ENST00000206542.8 2002 11 298 399 no_subtype FALSE canonical NA NA 239 None 7 1 0 FALSE 0 0 NA A coding 335 1005 125 1129 PB.4262.1 chr7 + 2049 9 full-splice_match GET4 ENST00000265857.7 2090 9 39 2 no_subtype FALSE canonical NA NA 950 None 10 7 0 FALSE 0 0 NA C coding 321 963 74 1036 PB.6540.1 chr11 + 3449 16 novel_not_in_catalog UVRAG novel NA NA NA NA no_subtype FALSE canonical NA NA 1511 None 3 4 0 TRUE 0 0 NA B coding 699 2097 115 2211 PB.4262.3 chr7 + 2783 11 novel_not_in_catalog GET4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1683 None 4 19 0 TRUE 0 0 NA C coding 274 822 948 1769 PB.3472.2 chr5 - 3353 14 novel_not_in_catalog AFF4 novel NA NA NA NA no_subtype FALSE canonical NA NA 373 None 10 4 0 TRUE 0 0 NA B coding 900 2700 378 3077 PB.11173.1 chrX - 2922 19 novel_not_in_catalog MAP7D3 novel NA NA NA NA no_subtype FALSE canonical NA NA 83 None 5 3 0 FALSE 0 0 NA A coding 875 2625 17 2641 PB.1387.1 chr2 + 2810 13 full-splice_match MEIS1 ENST00000272369.13 4291 13 371 1110 no_subtype FALSE canonical NA NA 1296 None 37 2 0 FALSE 0 0 NA C coding 368 1104 153 1256 PB.1387.3 chr2 + 2712 12 novel_in_catalog MEIS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1201 None 4 3 0 FALSE 0 0 NA C coding 443 1329 154 1482 PB.4510.1 chr7 - 5781 2 full-splice_match SAMD9 ENST00000620985.4 6754 2 56 917 no_subtype FALSE canonical NA NA 105 None 4 11 1 FALSE 0 0 NA C coding 1589 4767 114 4880 PB.6141.1 chr11 + 1533 11 full-splice_match SLC22A18 ENST00000312221.9 1628 11 91 4 no_subtype TRUE canonical NA NA 1300 None 18 1 0 FALSE 0 0 NA C coding 424 1272 214 1485 PB.6141.3 chr11 + 1451 10 novel_in_catalog SLC22A18 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1220 None 2 1 0 FALSE 0 0 NA C coding 424 1272 134 1405 PB.6141.2 chr11 + 1549 11 novel_not_in_catalog SLC22A18 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1317 None 23 1 0 FALSE 0 0 NA C coding 424 1272 231 1502 PB.9866.1 chr19 + 1606 1 full-splice_match PGLS ENST00000596799.1 1601 1 -24 19 no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA A coding 200 600 54 653 PB.4580.1 chr7 + 2678 12 full-splice_match PSMC2 ENST00000292644.4 2637 12 -38 -3 no_subtype FALSE canonical NA NA 1182 None 77 15 0 FALSE 0 0 NA A coding 433 1299 39 1337 PB.268.1 chr1 - 1386 7 full-splice_match MEAF6 ENST00000296214.9 1525 7 -1 140 no_subtype FALSE canonical NA NA 119 None 16 6 0 FALSE 0 0 NA A coding 191 573 30 602 PB.1859.13 chr2 + 2384 8 novel_not_in_catalog SLC11A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1644 None 2 14 0 FALSE 0 0 NA C coding 121 363 1297 1659 PB.358.1 chr1 - 3004 1 genic_intron novelGene_504 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A coding 108 324 2679 3002 PB.2194.1 chr3 - 1336 5 full-splice_match RHOA ENST00000418115.5 2031 5 223 472 no_subtype FALSE canonical NA NA 160 None 505 0 0 FALSE 0 0 NA C coding 193 579 163 741 PB.6252.1 chr11 - 3002 2 genic_intron novelGene_310 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 700 None 11 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9882.1 chr19 - 1377 3 full-splice_match LRRC25 ENST00000595840.1 1924 3 9 538 no_subtype FALSE canonical NA NA 150 None 25 5 0 FALSE 0 0 NA A coding 305 915 160 1074 PB.8601.1 chr16 + 1442 2 antisense novelGene_SNX20_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 850 None 17 4 0 FALSE 0 0 NA A coding 99 297 1057 1353 PB.4934.1 chr8 - 1419 2 genic SNORD54 novel NA NA NA NA no_subtype FALSE canonical NA NA 131 None 3 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8280.16 chr15 + 2865 1 novel_in_catalog ABHD2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1550.1 chr2 + 3198 11 full-splice_match SLC20A1 ENST00000272542.7 3381 11 174 9 no_subtype FALSE canonical NA NA 2243 None 53 8 0 FALSE 0 0 NA C coding 679 2037 366 2402 PB.6455.6 chr11 + 2745 1 genic_intron novelGene_623 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9850.7 chr19 - 2658 22 full-splice_match EPS15L1 ENST00000535753.6 2666 22 23 -15 no_subtype FALSE canonical NA NA 41 None 3 2 0 FALSE 0 0 NA C coding 754 2262 9 2270 PB.9035.1 chr17 + 4475 31 incomplete-splice_match NF1 ENST00000358273.8 12425 58 50 7900 3prime_fragment TRUE canonical NA NA 4443 None 5 0 0 FALSE 0 0 NA B coding 1380 4140 334 4473 PB.8986.1 chr17 + 2151 13 novel_not_in_catalog MAP2K3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1091 None 15 5 0 TRUE 0 0 NA B coding 347 1041 129 1169 PB.3486.1 chr5 + 6351 11 novel_in_catalog JADE2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1619 None 2 18 1 FALSE 0 0 NA C coding 791 2373 68 2440 PB.8986.2 chr17 + 1526 2 novel_in_catalog MAP2K3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 259 None 2 5 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8986.3 chr17 + 6339 2 novel_not_in_catalog MAP2K3 novel NA NA NA NA no_subtype FALSE canonical NA NA 4738 None 12 17 1 TRUE 0 0 NA B coding 166 498 211 708 PB.6628.1 chr11 + 1642 1 novel_in_catalog CUL5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 12 0 FALSE 0 0 NA B coding 110 330 1 330 PB.121.1 chr1 + 5915 18 full-splice_match ZBTB40 ENST00000375647.4 8685 18 -8 2778 no_subtype FALSE canonical NA NA 3740 None 5 9 1 FALSE 0 0 NA C coding 1239 3717 216 3932 PB.121.2 chr1 + 6052 19 novel_not_in_catalog ZBTB40 novel NA NA NA NA no_subtype FALSE canonical NA NA 3838 None 6 8 0 FALSE 0 0 NA C coding 1239 3717 314 4030 PB.121.3 chr1 + 5770 17 novel_in_catalog ZBTB40 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3595 None 2 11 0 FALSE 0 0 NA C coding 1239 3717 71 3787 PB.6804.1 chr12 + 3221 16 novel_in_catalog PEX5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1791 None 4 6 0 FALSE 0 0 NA C coding 639 1917 74 1990 PB.8216.1 chr15 - 2904 3 full-splice_match SIN3A ENST00000567289.5 4078 3 -19 1193 no_subtype FALSE canonical NA NA 261 None 2 6 0 FALSE 0 0 NA C coding 156 468 295 762 PB.6804.3 chr12 + 3010 15 novel_not_in_catalog PEX5 novel NA NA NA NA no_subtype FALSE canonical NA NA 1614 None 2 8 0 TRUE 0 0 NA C coding 581 1743 37 1779 PB.6804.2 chr12 + 3091 15 full-splice_match PEX5 ENST00000266563.9 3252 15 131 30 no_subtype FALSE canonical NA NA 1659 None 2 8 0 FALSE 0 0 NA C coding 602 1806 53 1858 PB.3146.8 chr4 - 3833 21 full-splice_match ACSL1 ENST00000513317.5 2469 21 80 -1444 no_subtype FALSE canonical NA NA 182 None 4 7 1 FALSE 0 0 NA C coding 698 2094 215 2308 PB.9520.1 chr18 - 3287 2 genic CHST9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3010 None 5 15 0 TRUE 0 0 NA A coding 86 258 246 503 PB.9582.1 chr18 - 3215 12 novel_not_in_catalog CCBE1 novel NA NA NA NA no_subtype FALSE canonical NA NA 172 None 5 13 0 TRUE 0 0 NA A coding 406 1218 42 1259 PB.3064.5 chr4 + 2568 11 novel_in_catalog SMARCA5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1324 None 2 2 0 FALSE 0 0 NA C coding 430 1290 98 1387 PB.3146.1 chr4 - 3236 21 full-splice_match ACSL1 ENST00000281455.6 3832 21 70 526 no_subtype FALSE canonical NA NA 109 None 142 6 0 FALSE 0 0 NA C coding 698 2094 142 2235 PB.7003.1 chr12 - 2911 16 novel_not_in_catalog CALCOCO1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 36 None 116 7 2 TRUE 0 0 NA C coding 658 1974 61 2034 PB.3146.5 chr4 - 1544 1 incomplete-splice_match ACSL1 ENST00000503407.5 2409 9 865 1 no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6514.2 chr11 + 1729 4 genic RP11-800A3.4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 275 None 2 8 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.5644.1 chr9 + 1553 8 full-splice_match ARRDC1 ENST00000371421.8 1586 8 32 1 no_subtype FALSE canonical NA NA 1269 None 47 2 0 FALSE 0 0 NA A coding 433 1299 33 1331 PB.1024.1 chr1 - 2126 1 genic_intron novelGene_1392 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2297.1 chr3 - 3253 13 full-splice_match FRMD4B ENST00000478263.5 3761 13 327 181 no_subtype FALSE canonical NA NA 151 None 13 3 0 FALSE 0 0 NA C coding 686 2058 320 2377 PB.3068.1 chr4 + 2517 2 genic RTN3P1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1868 None 37 17 1 FALSE 0 0 NA C coding 236 708 133 840 PB.2731.1 chr4 + 3253 19 full-splice_match MAN2B2 ENST00000285599.7 5143 19 27 1863 no_subtype TRUE canonical NA NA 2941 None 75 5 0 FALSE 0 0 NA A coding 1009 3027 10 3036 PB.5351.1 chr9 - 1466 11 novel_not_in_catalog GOLM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 131 None 34 6 1 TRUE 0 0 NA B coding 401 1203 153 1355 PB.2965.1 chr4 - 3532 1 genic_intron novelGene_893 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3495.7 chr5 - 1361 9 full-splice_match H2AFY ENST00000511689.5 2789 9 393 1035 no_subtype FALSE canonical NA NA 168 None 4 2 0 FALSE 0 0 NA C coding 372 1116 202 1317 PB.5351.2 chr9 - 1478 11 novel_not_in_catalog GOLM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 145 None 33 4 0 TRUE 0 0 NA B coding 391 1173 197 1369 PB.296.1 chr1 + 3251 2 full-splice_match EXO5 ENST00000420209.1 863 2 -10 -2378 no_subtype FALSE canonical NA NA 165 None 2 12 0 FALSE 0 0 NA A coding 373 1119 196 1314 PB.8488.2 chr16 + 3052 3 antisense novelGene_IGSF6_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2912 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8488.1 chr16 + 1548 5 full-splice_match METTL9 ENST00000358154.7 3256 5 169 1539 no_subtype FALSE canonical NA NA 840 None 95 1 0 FALSE 0 0 NA A coding 318 954 90 1043 PB.3064.1 chr4 + 3606 24 full-splice_match SMARCA5 ENST00000283131.3 7923 24 243 4074 no_subtype FALSE canonical NA NA 3312 None 55 2 0 FALSE 0 0 NA C coding 1052 3156 220 3375 PB.9728.1 chr19 + 2684 12 full-splice_match MAP2K7 ENST00000397983.7 3396 12 -8 720 no_subtype FALSE canonical NA NA 1241 None 4 11 0 FALSE 0 0 NA C coding 435 1305 69 1373 PB.10694.1 chr22 + 5889 21 novel_not_in_catalog MTMR3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4147 None 34 13 1 TRUE 0 0 NA B coding 1198 3594 264 3857 PB.10694.2 chr22 + 5825 20 novel_not_in_catalog MTMR3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4083 None 4 17 1 TRUE 0 0 NA B coding 1161 3483 311 3793 PB.10694.3 chr22 + 5880 20 novel_not_in_catalog MTMR3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4132 None 3 14 1 TRUE 0 0 NA B coding 1198 3594 249 3842 PB.10694.4 chr22 + 5972 21 novel_not_in_catalog MTMR3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4249 None 3 16 1 TRUE 0 0 NA B coding 1198 3594 366 3959 PB.8748.1 chr16 - 1277 8 novel_not_in_catalog CFDP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 210 None 4 1 0 TRUE 0 0 NA A coding 299 897 147 1043 PB.10694.6 chr22 + 5779 20 novel_not_in_catalog MTMR3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4022 None 4 13 1 TRUE 0 0 NA B coding 1198 3594 139 3732 PB.9776.1 chr19 - 1506 5 full-splice_match RAB3D ENST00000222120.7 4273 5 21 2746 no_subtype FALSE canonical NA NA 179 None 3 4 0 FALSE 0 0 NA A coding 219 657 241 897 PB.5851.1 chr10 - 3156 3 novel_not_in_catalog ZSWIM8-AS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1290 None 6 10 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.7999.1 chr15 + 2458 18 novel_not_in_catalog IVD novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2364 None 3 15 6 TRUE 0 0 NA B coding 371 1113 161 1273 PB.3979.2 chr6 - 2632 1 antisense novelGene_PTP4A1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 109 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7999.3 chr15 + 1668 1 incomplete-splice_match BAHD1 ENST00000416165.5 4526 7 2845 14 no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7999.2 chr15 + 2642 19 novel_not_in_catalog IVD novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2499 None 4 10 2 TRUE 0 0 NA B coding 371 1113 161 1273 PB.9850.9 chr19 - 3550 16 full-splice_match EPS15L1 ENST00000597937.5 3486 16 -34 -30 no_subtype FALSE canonical NA NA 72 None 47 8 0 FALSE 0 0 NA C coding 601 1803 40 1842 PB.5921.1 chr10 + 1715 4 full-splice_match HHEX ENST00000282728.9 1727 4 4 8 no_subtype FALSE canonical NA NA 623 None 30 7 0 FALSE 0 0 NA C coding 270 810 33 842 PB.3578.2 chr5 + 4394 25 novel_not_in_catalog TCOF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3834 None 9 11 1 TRUE 0 0 NA A coding 1447 4341 54 4394 PB.742.8 chr1 + 2703 13 novel_not_in_catalog SEMA4A novel NA NA NA NA no_subtype FALSE canonical NA NA 1374 None 8 2 0 TRUE 0 0 NA C coding 592 1776 189 1964 PB.1691.1 chr2 - 2888 1 genic_intron novelGene_1305 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 12 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.60 chr14 - 1498 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 13 2 TRUE 0 0 NA B coding 254 762 691 1452 PB.7959.61 chr14 - 1480 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 15 3 TRUE 0 0 NA B coding 260 780 11 790 PB.7959.62 chr14 - 1478 8 fusion IGHV4-34,IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 29 None 2 19 3 TRUE 0 0 NA A coding 381 1143 290 1432 PB.7959.63 chr14 - 1521 7 fusion IGHA1,IGHV3-21 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 121 None 2 23 3 TRUE 0 0 NA A coding 251 753 723 1475 PB.9163.8 chr17 - 3788 29 novel_not_in_catalog HDAC5 novel NA NA NA NA no_subtype FALSE canonical NA NA 154 None 3 1 0 TRUE 0 0 NA B coding 1122 3366 344 3709 PB.7959.65 chr14 - 1452 9 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 83 None 2 16 4 TRUE 0 0 NA B coding 251 753 654 1406 PB.7959.66 chr14 - 1495 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 14 2 TRUE 0 0 NA B coding 265 795 11 805 PB.7959.67 chr14 - 1527 7 fusion IGHA1,CH17-212P11.5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 103 None 5 9 1 TRUE 0 0 NA B coding 254 762 720 1481 PB.7959.68 chr14 - 1532 6 fusion IGHV6-1,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 104 None 3 6 1 TRUE 0 0 NA B coding 254 762 725 1486 PB.9163.5 chr17 - 3729 27 novel_in_catalog HDAC5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 93 None 77 0 0 FALSE 0 0 NA B coding 1122 3366 283 3648 PB.3850.9 chr6 - 2691 18 novel_not_in_catalog RGL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 68 None 2 9 1 FALSE 0 0 NA C coding 337 1011 1240 2250 PB.9163.3 chr17 - 3754 28 novel_not_in_catalog HDAC5 novel NA NA NA NA no_subtype FALSE canonical NA NA 113 None 102 1 1 FALSE 0 0 NA B coding 1091 3273 403 3675 PB.10571.1 chr21 + 2922 1 incomplete-splice_match B3GALT5 ENST00000380620.8 13170 5 10245 4 no_subtype FALSE canonical NA NA NA None 17 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10019.11 chr19 + 3576 31 novel_in_catalog ARHGEF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3237 None 3 1 0 FALSE 0 0 NA C coding 987 2961 257 3217 PB.10019.10 chr19 + 3182 30 novel_not_in_catalog ARHGEF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2841 None 2 3 2 FALSE 0 0 NA C coding 837 2511 75 2585 PB.1550.5 chr2 + 3349 12 novel_in_catalog SLC20A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2393 None 9 11 0 FALSE 0 0 NA C coding 426 1278 1275 2552 PB.9794.1 chr19 - 1676 10 full-splice_match FBXW9 ENST00000393261.7 1738 10 55 7 no_subtype FALSE canonical NA NA 416 None 6 2 0 FALSE 0 0 NA A coding 458 1374 8 1381 PB.1828.1 chr2 - 3507 1 incomplete-splice_match FZD5 ENST00000295417.3 6708 2 3198 4 no_subtype FALSE canonical NA NA NA None 16 15 0 FALSE 0 0 NA A coding 104 312 1772 2083 PB.1469.1 chr2 - 3069 1 novel_in_catalog FABP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 17 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1731.1 chr2 - 4104 15 novel_in_catalog PDE1A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 454 None 2 12 0 FALSE 0 0 NA A coding 529 1587 402 1988 PB.8323.1 chr15 + 1909 10 full-splice_match LRRC28 ENST00000301981.7 5971 10 121 3941 no_subtype FALSE canonical NA NA 1150 None 2 8 1 FALSE 0 0 NA A coding 367 1101 120 1220 PB.5276.4 chr9 - 4260 10 novel_in_catalog PIGO novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 27 None 2 36 1 FALSE 0 0 NA B coding 969 2907 29 2935 PB.6735.4 chr11 + 2902 2 genic_intron novelGene_1111 novel NA NA NA NA no_subtype FALSE canonical NA NA 2854 None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2964.2 chr4 + 2521 15 full-splice_match RAP1GDS1 ENST00000408927.7 3681 15 -39 1199 no_subtype FALSE canonical NA NA 1848 None 13 0 0 FALSE 0 0 NA A coding 607 1821 153 1973 PB.5276.1 chr9 - 3707 11 novel_in_catalog PIGO novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 41 None 27 6 0 FALSE 0 0 NA B coding 1089 3267 43 3309 PB.6735.3 chr11 + 3113 4 novel_in_catalog FLI1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 537 None 6 18 0 FALSE 0 0 NA C coding 250 750 153 902 PB.6735.1 chr11 + 2921 9 full-splice_match FLI1 ENST00000527786.6 4127 9 352 854 no_subtype FALSE canonical NA NA 966 None 121 7 0 FALSE 0 0 NA C coding 452 1356 138 1493 PB.1290.1 chr2 - 2833 1 novel_in_catalog THUMPD2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1784.1 chr2 - 3227 1 genic_intron novelGene_1370 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4325.3 chr7 + 2786 5 full-splice_match KLHL7 ENST00000322275.9 969 5 8 -1825 no_subtype FALSE canonical NA NA 676 None 2 20 0 FALSE 0 0 NA C coding 166 498 235 732 PB.4325.2 chr7 + 2883 10 novel_in_catalog KLHL7 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1481 None 2 7 0 FALSE 0 0 NA C coding 336 1008 246 1253 PB.4325.1 chr7 + 2996 11 full-splice_match KLHL7 ENST00000339077.9 5620 11 10 2614 no_subtype FALSE canonical NA NA 1710 None 30 6 0 FALSE 0 0 NA C coding 586 1758 234 1991 PB.3583.1 chr5 + 1631 3 novel_not_in_catalog SMIM3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 327 None 16 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8760.1 chr16 - 3162 4 intergenic novelGene_740 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1444 None 2 15 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.1421.1 chr2 + 1287 9 full-splice_match ACTG2 ENST00000345517.7 1530 9 29 214 no_subtype FALSE canonical NA NA 1067 None 86 4 0 FALSE 0 0 NA C coding 376 1128 81 1208 PB.4278.1 chr7 + 1640 13 full-splice_match WIPI2 ENST00000404704.7 1663 13 -20 43 no_subtype FALSE canonical NA NA 1413 None 2 4 0 FALSE 0 0 NA C coding 443 1329 195 1523 PB.4278.2 chr7 + 1605 12 full-splice_match WIPI2 ENST00000401525.7 2112 12 46 461 no_subtype FALSE canonical NA NA 1376 None 3 0 0 FALSE 0 0 NA C coding 436 1308 179 1486 PB.3491.1 chr5 + 3597 24 novel_not_in_catalog DDX46 novel NA NA NA NA no_subtype FALSE canonical NA NA 3219 None 2 3 2 TRUE 0 0 NA A coding 883 2649 161 2809 PB.4893.1 chr8 - 6212 42 full-splice_match ANK1 ENST00000347528.8 8237 42 -85 2110 no_subtype TRUE canonical NA NA 196 None 3 4 1 FALSE 0 0 NA A coding 1881 5643 170 5812 PB.4150.7 chr6 - 2477 1 genic_intron novelGene_1168 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6106.1 chr11 + 2809 13 full-splice_match PKP3 ENST00000331563.6 2809 13 -2 2 no_subtype TRUE canonical NA NA 2436 None 27 4 0 FALSE 0 0 NA A coding 797 2391 79 2469 PB.1242.1 chr2 - 2660 5 full-splice_match SUPT7L ENST00000464789.2 2664 5 7 -3 no_subtype FALSE canonical NA NA 118 None 2 5 0 FALSE 0 0 NA A coding 412 1236 1004 2239 PB.3000.1 chr4 + 1655 2 genic RNU6-431P novel NA NA NA NA no_subtype FALSE canonical NA NA 195 None 2 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1534.2 chr2 + 2660 6 incomplete-splice_match GCC2 ENST00000309863.10 7537 23 655 4222 3prime_fragment FALSE canonical NA NA 380 None 7 23 0 FALSE 0 0 NA B coding 867 2601 60 2660 PB.1838.1 chr2 - 1676 2 genic_intron novelGene_1397 novel NA NA NA NA no_subtype FALSE canonical NA NA 1595 None 5 8 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7249.1 chr12 - 1358 8 full-splice_match GPN3 ENST00000228827.7 1468 8 35 75 no_subtype FALSE canonical NA NA 76 None 12 6 0 FALSE 0 0 NA A coding 284 852 29 880 PB.3592.1 chr5 + 5601 12 novel_not_in_catalog SLC36A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 5500 None 2 25 1 TRUE 0 0 NA B coding 476 1428 76 1503 PB.8681.2 chr16 - 1792 13 novel_not_in_catalog CENPT novel NA NA NA NA no_subtype TRUE canonical NA NA 146 None 2 3 0 FALSE 0 0 NA B coding 549 1647 37 1683 PB.1275.12 chr2 - 2721 20 novel_not_in_catalog EIF2AK2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 45 None 4 16 4 TRUE 0 0 NA B coding 262 786 320 1105 PB.6969.1 chr12 + 5881 5 novel_not_in_catalog DIP2B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3497 None 5 39 1 TRUE 0 0 NA A coding 151 453 142 594 PB.3471.1 chr5 - 3681 1 incomplete-splice_match AFF4 ENST00000265343.9 9552 21 5847 25 no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA B coding 108 324 770 1093 PB.2692.1 chr3 + 3527 1 incomplete-splice_match SENP5 ENST00000323460.9 6308 10 2776 6 no_subtype FALSE canonical NA NA NA None 2 35 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4914.1 chr8 - 2001 3 full-splice_match SNAI2 ENST00000020945.2 2099 3 11 87 no_subtype FALSE canonical NA NA 243 None 2 8 0 FALSE 0 0 NA A coding 268 804 165 968 PB.5793.1 chr10 - 3002 1 genic_intron novelGene_572 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3132.1 chr4 - 1663 7 novel_not_in_catalog FBXO8 novel NA NA NA NA no_subtype TRUE canonical NA NA 258 None 7 2 0 TRUE 0 0 NA C coding 319 957 267 1223 PB.1703.2 chr2 + 2080 12 novel_not_in_catalog AC013461.1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1024 None 2 6 0 TRUE 0 0 NA B coding 455 1365 38 1402 PB.8297.2 chr15 + 4433 23 novel_not_in_catalog BLM novel NA NA NA NA no_subtype FALSE canonical NA NA 4175 None 2 1 0 TRUE 0 0 NA B coding 1417 4251 100 4350 PB.1703.4 chr2 + 1457 1 incomplete-splice_match AC013461.1 ENST00000338983.7 7179 12 5718 5 no_subtype FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7928.1 chr14 + 1431 7 incomplete-splice_match DYNC1H1 ENST00000360184.8 14333 78 45 12857 3prime_fragment FALSE canonical NA NA 1352 None 5 1 1 FALSE 0 0 NA B coding 437 1311 120 1430 PB.9266.1 chr17 - 3564 25 full-splice_match TRIM37 ENST00000393066.7 3622 25 56 2 no_subtype TRUE canonical NA NA 425 None 2 9 0 FALSE 0 0 NA A coding 964 2892 405 3296 PB.3163.4 chr5 - 6099 23 novel_in_catalog SLC12A7 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 102 None 2 38 2 FALSE 0 0 NA B coding 1014 3042 183 3224 PB.3163.5 chr5 - 5066 23 novel_in_catalog SLC12A7 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 96 None 2 20 0 FALSE 0 0 NA B coding 1015 3045 82 3126 PB.3163.3 chr5 - 5559 22 novel_in_catalog SLC12A7 novel NA NA NA NA combination_of_known_junctions TRUE non_canonical NA NA 96 None 2 30 0 FALSE 0 0 NA B coding 497 1491 2093 3583 PB.5768.14 chr10 - 3275 9 novel_in_catalog NCOA4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 72 None 12 14 0 FALSE 0 0 NA C coding 448 1344 430 1773 PB.7494.1 chr13 - 2839 17 full-splice_match KPNA3 ENST00000261667.7 4474 17 362 1273 no_subtype TRUE canonical NA NA 122 None 26 5 0 FALSE 0 0 NA A coding 521 1563 54 1616 PB.4531.1 chr7 - 1300 6 full-splice_match PDAP1 ENST00000350498.7 2546 6 220 1026 no_subtype FALSE canonical NA NA 74 None 9 6 0 FALSE 0 0 NA A coding 181 543 62 604 PB.10142.3 chr19 + 2518 2 novel_not_in_catalog FPR3 novel NA NA NA NA no_subtype FALSE canonical NA NA 51 None 2 11 0 FALSE 0 0 NA B coding 353 1059 62 1120 PB.10142.1 chr19 + 2596 4 novel_not_in_catalog FPR3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 150 None 2 10 1 TRUE 0 0 NA B coding 353 1059 161 1219 PB.5757.1 chr10 + 2863 5 full-splice_match TMEM72 ENST00000389583.4 3009 5 150 -4 no_subtype FALSE canonical NA NA 512 None 2 15 0 FALSE 0 0 NA A coding 275 825 164 988 PB.6076.1 chr10 + 1532 8 novel_not_in_catalog LHPP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 900 None 2 9 0 TRUE 0 0 NA B coding 270 810 37 846 PB.4364.2 chr7 + 3555 23 full-splice_match BBS9 ENST00000242067.10 4027 23 33 439 no_subtype TRUE canonical NA NA 3120 None 2 5 0 FALSE 0 0 NA C coding 887 2661 489 3149 PB.266.1 chr1 - 3216 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 62 None 281 5 1 FALSE 0 0 NA C coding 836 2508 447 2954 PB.10011.2 chr19 + 1587 8 novel_not_in_catalog BCKDHA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1018 None 2 2 1 TRUE 0 0 NA C coding 117 351 836 1186 PB.7966.1 chr15 - 3131 11 full-splice_match UBE3A ENST00000232165.7 5051 11 54 1866 no_subtype TRUE canonical NA NA 514 None 2 3 0 FALSE 0 0 NA A coding 852 2556 555 3110 PB.266.8 chr1 - 3046 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 100 None 83 6 1 FALSE 0 0 NA C coding 836 2508 279 2786 PB.266.9 chr1 - 3377 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 68 None 14 5 1 FALSE 0 0 NA C coding 680 2040 449 2488 PB.2498.2 chr3 + 1448 2 genic_intron novelGene_1191 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1326 None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1286.1 chr2 + 2312 7 novel_not_in_catalog GALM novel NA NA NA NA no_subtype FALSE canonical NA NA 1036 None 2 10 0 TRUE 0 0 NA B coding 266 798 261 1058 PB.1286.2 chr2 + 2448 8 novel_not_in_catalog GALM novel NA NA NA NA no_subtype FALSE canonical NA NA 1173 None 4 13 0 TRUE 0 0 NA B coding 342 1026 223 1248 PB.4364.1 chr7 + 3637 2 novel_not_in_catalog BBS9 novel NA NA NA NA no_subtype FALSE canonical NA NA 2369 None 2 25 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.2498.4 chr3 + 2760 1 incomplete-splice_match SLC25A36 ENST00000446041.6 4638 7 1876 3 no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7513.3 chr13 + 2641 17 novel_not_in_catalog TDRD3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2387 None 2 9 3 TRUE 0 0 NA B coding 742 2226 150 2375 PB.7513.2 chr13 + 2641 15 novel_not_in_catalog TDRD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2386 None 8 5 0 TRUE 0 0 NA B coding 744 2232 143 2374 PB.2033.1 chr3 - 1922 17 full-splice_match HACL1 ENST00000321169.9 2266 17 295 49 no_subtype FALSE canonical NA NA 154 None 5 0 0 FALSE 0 0 NA A coding 578 1734 74 1807 PB.4948.1 chr8 - 1236 9 full-splice_match GGH ENST00000260118.6 1607 9 367 4 no_subtype FALSE canonical NA NA 145 None 2 4 0 FALSE 0 0 NA A coding 318 954 37 990 PB.5896.4 chr10 - 1469 4 novel_in_catalog ACTA2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 42 None 2 6 0 FALSE 0 0 NA C coding 154 462 66 527 PB.4292.1 chr7 + 6154 6 novel_not_in_catalog C1GALT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2804 None 2 43 1 TRUE 0 0 NA A coding 363 1089 204 1292 PB.10441.5 chr20 + 2883 1 genic_intron novelGene_501 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.753.1 chr1 - 1510 9 novel_not_in_catalog SH2D2A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 75 None 3 5 2 TRUE 0 0 NA C coding 369 1107 69 1175 PB.10436.3 chr20 + 2449 7 novel_not_in_catalog RNF114 novel NA NA NA NA no_subtype FALSE canonical NA NA 635 None 43 12 0 TRUE 0 0 NA B coding 228 684 15 698 PB.11070.1 chrX + 2871 1 genic_intron novelGene_886 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10436.1 chr20 + 5973 19 novel_not_in_catalog SLC9A8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3248 None 4 30 1 TRUE 0 0 NA A coding 581 1743 15 1757 PB.10436.6 chr20 + 1693 1 incomplete-splice_match RNF114 ENST00000244061.5 2503 6 799 12 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10436.7 chr20 + 1700 3 full-splice_match SNAI1 ENST00000244050.2 1686 3 -19 5 no_subtype FALSE canonical NA NA 690 None 3 7 0 FALSE 0 0 NA A coding 264 792 81 872 PB.10436.5 chr20 + 3319 2 novel_not_in_catalog RNF114 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1532 None 35 11 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.9738.14 chr19 - 3753 28 novel_in_catalog MYO1F novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 139 None 9 4 1 FALSE 0 0 NA C coding 1068 3204 137 3340 PB.5876.1 chr10 + 6270 3 antisense novelGene_ANXA11_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 946 None 3 43 2 FALSE 0 0 NA A coding 125 375 2704 3078 PB.9738.17 chr19 - 1168 1 full-splice_match MYO1F ENST00000595046.1 1001 1 97 -264 no_subtype FALSE canonical NA NA NA None 6 7 0 FALSE 0 0 NA C coding 98 294 111 404 PB.9993.1 chr19 - 3269 6 novel_not_in_catalog FCGBP novel NA NA NA NA no_subtype FALSE canonical NA NA 18 None 2 3 1 TRUE 0 0 NA B coding 952 2856 21 2876 PB.2953.1 chr4 + 3120 2 full-splice_match TIGD2 ENST00000603357.2 3217 2 83 14 no_subtype FALSE canonical NA NA 301 None 7 13 0 FALSE 0 0 NA A coding 525 1575 1210 2784 PB.9621.2 chr19 - 2741 14 novel_in_catalog MIER2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 19 None 2 12 0 FALSE 0 0 NA C coding 538 1614 11 1624 PB.6028.6 chr10 + 3164 1 genic_intron novelGene_1002 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 23 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6028.5 chr10 + 6143 2 genic_intron novelGene_1002 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2593 None 3 34 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.6028.4 chr10 + 3501 2 genic_intron novelGene_998 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 385 None 2 28 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10567.1 chr21 - 1255 6 full-splice_match HMGN1 ENST00000380749.9 1383 6 116 12 no_subtype FALSE canonical NA NA 182 None 37 7 0 FALSE 0 0 NA A coding 100 300 168 467 PB.917.1 chr1 + 3315 6 full-splice_match C1orf21 ENST00000235307.6 10265 6 -42 6992 no_subtype FALSE canonical NA NA 804 None 3 11 0 FALSE 0 0 NA C coding 121 363 478 840 PB.6028.1 chr10 + 3409 9 novel_not_in_catalog VTI1A novel NA NA NA NA no_subtype TRUE canonical NA NA 711 None 10 9 0 TRUE 0 0 NA A coding 217 651 152 802 PB.5955.1 chr10 - 1404 3 full-splice_match AVPI1 ENST00000370626.3 1457 3 51 2 no_subtype FALSE canonical NA NA 507 None 4 8 0 FALSE 0 0 NA A coding 147 441 518 958 PB.5577.2 chr9 + 6228 36 novel_not_in_catalog NUP214 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5983 None 5 0 0 FALSE 0 0 NA B coding 1982 5946 69 6014 PB.5577.1 chr9 + 6593 37 novel_not_in_catalog NUP214 novel NA NA NA NA no_subtype TRUE canonical NA NA 6348 None 4 3 0 TRUE 0 0 NA B coding 2090 6270 110 6379 PB.5150.3 chr8 + 1664 11 novel_in_catalog GSDMD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1276 None 3 3 1 FALSE 0 0 NA B coding 484 1452 65 1516 PB.329.2 chr1 + 2717 1 genic_intron novelGene_441 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A coding 140 420 1116 1535 PB.329.1 chr1 + 1424 6 incomplete-splice_match RNF220 ENST00000484745.5 1951 10 525 2 internal_fragment FALSE canonical NA NA 406 None 2 2 0 FALSE 0 0 NA A coding 110 330 146 475 PB.10912.1 chrX + 2878 13 full-splice_match CYBB ENST00000378588.4 4324 13 60 1386 no_subtype FALSE canonical NA NA 1593 None 33 8 1 FALSE 0 0 NA C coding 570 1710 8 1717 PB.9977.2 chr19 + 1860 5 full-splice_match NFKBIB ENST00000572515.5 1929 5 66 3 no_subtype FALSE canonical NA NA 723 None 2 8 0 FALSE 0 0 NA C coding 338 1014 16 1029 PB.9977.1 chr19 + 1192 6 full-splice_match NFKBIB ENST00000313582.5 1159 6 -28 -5 no_subtype FALSE canonical NA NA 1031 None 2 1 0 FALSE 0 0 NA C coding 356 1068 63 1130 PB.10264.2 chr20 + 2021 4 incomplete-splice_match CHGB ENST00000378961.8 2550 5 80 449 3prime_fragment FALSE canonical NA NA 314 None 2 3 0 FALSE 0 0 NA C coding 632 1896 125 2020 PB.8694.2 chr16 + 2511 8 novel_not_in_catalog PLA2G15 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2151 None 5 8 0 TRUE 0 0 NA B coding 236 708 55 762 PB.10980.2 chrX + 2919 3 novel_not_in_catalog FAM156B novel NA NA NA NA no_subtype FALSE canonical NA NA 1480 None 3 6 0 FALSE 0 0 NA B coding 213 639 1598 2236 PB.9394.1 chr17 - 1295 1 incomplete-splice_match SRSF2 ENST00000392485.2 2885 2 1586 5 no_subtype FALSE canonical NA NA NA None 6 3 0 FALSE 0 0 NA C coding 58 174 132 305 PB.9417.1 chr17 + 2554 15 novel_not_in_catalog ENGASE novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1804 None 2 10 1 TRUE 0 0 NA A coding 613 1839 380 2218 PB.5032.1 chr8 - 5727 1 full-splice_match TSPYL5 ENST00000322128.4 4491 1 3528 -4764 no_subtype FALSE canonical NA NA NA None 2 52 0 FALSE 0 0 NA A coding 140 420 2762 3181 PB.2399.1 chr3 + 5982 15 novel_not_in_catalog ARHGAP31 novel NA NA NA NA no_subtype FALSE canonical NA NA 2122 None 16 5 1 TRUE 0 0 NA A coding 995 2985 1544 4528 PB.9117.1 chr17 - 1514 9 novel_not_in_catalog KRT20 novel NA NA NA NA no_subtype FALSE canonical NA NA 450 None 520 1 0 TRUE 0 0 NA B coding 186 558 775 1332 PB.2654.4 chr3 + 1849 11 novel_in_catalog EIF4A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1084 None 7 5 1 FALSE 0 0 NA C coding 267 801 180 980 PB.2943.1 chr4 + 1553 7 full-splice_match SPP1 ENST00000395080.7 1473 7 32 -112 no_subtype FALSE canonical NA NA 635 None 2 13 1 FALSE 0 0 NA A coding 314 942 96 1037 PB.9117.2 chr17 - 3370 7 novel_not_in_catalog KRT20 novel NA NA NA NA no_subtype FALSE canonical NA NA 445 None 5 10 0 TRUE 0 0 NA B coding 142 426 770 1195 PB.3903.1 chr6 + 6182 26 novel_not_in_catalog DAAM2 novel NA NA NA NA no_subtype TRUE canonical NA NA 3128 None 4 26 0 TRUE 0 0 NA A coding 1068 3204 147 3350 PB.5784.1 chr10 + 3735 1 incomplete-splice_match PRKG1 ENST00000401604.6 5922 15 2186 2 no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2654.5 chr3 + 1742 10 full-splice_match EIF4A2 ENST00000426808.5 1751 10 5 4 no_subtype FALSE canonical NA NA 973 None 5 1 0 FALSE 0 0 NA C coding 312 936 180 1115 PB.10079.1 chr19 + 2313 2 full-splice_match C5AR1 ENST00000355085.3 2311 2 -13 11 no_subtype FALSE canonical NA NA 38 None 9 12 0 FALSE 0 0 NA A coding 350 1050 36 1085 PB.1297.1 chr2 + 2839 1 genic_intron novelGene_421 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8318.1 chr15 + 3277 1 genic_intron novelGene_894 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3502.7 chr5 - 2778 19 novel_in_catalog BRD8 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 36 None 3 4 0 FALSE 0 0 NA C coding 522 1566 905 2470 PB.7845.1 chr14 - 2966 20 novel_not_in_catalog GALC novel NA NA NA NA no_subtype TRUE non_canonical NA NA 213 None 6 9 0 TRUE 0 0 NA A coding 685 2055 19 2073 PB.3502.6 chr5 - 2958 21 full-splice_match BRD8 ENST00000402931.5 2982 21 3 21 no_subtype FALSE canonical NA NA 35 None 6 5 0 FALSE 0 0 NA C coding 878 2634 17 2650 PB.60.1 chr1 + 2962 20 novel_not_in_catalog PLOD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2074 None 56 2 0 TRUE 0 0 NA A coding 727 2181 47 2227 PB.5100.2 chr8 - 2964 8 full-splice_match DERL1 ENST00000405944.7 1994 8 -170 -800 no_subtype FALSE canonical NA NA 323 None 2 13 1 FALSE 0 0 NA C coding 231 693 171 863 PB.2306.1 chr3 - 3499 1 genic_intron novelGene_690 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10955.2 chrX + 2782 5 novel_in_catalog SUV39H1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1214 None 2 9 0 FALSE 0 0 NA C coding 365 1095 24 1118 PB.4920.1 chr8 - 2471 9 full-splice_match LYPLA1 ENST00000316963.7 2585 9 100 14 no_subtype TRUE canonical NA NA 163 None 6 7 0 FALSE 0 0 NA A coding 225 675 110 784 PB.11094.3 chrX - 1835 5 novel_not_in_catalog MORF4L2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 75 None 2 4 2 TRUE 0 0 NA C coding 288 864 313 1176 PB.10955.1 chrX + 2688 6 full-splice_match SUV39H1 ENST00000376687.3 2871 6 181 2 no_subtype FALSE canonical NA NA 1114 None 16 4 0 FALSE 0 0 NA C coding 412 1236 10 1245 PB.11094.5 chrX - 1812 4 novel_in_catalog MORF4L2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 56 None 2 3 0 FALSE 0 0 NA C coding 288 864 293 1156 PB.11094.4 chrX - 1827 4 novel_in_catalog MORF4L2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 69 None 2 7 1 FALSE 0 0 NA C coding 288 864 306 1169 PB.4852.7 chr8 + 5778 1 genic_intron novelGene_270 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 31 0 FALSE 0 0 NA A coding 118 354 3589 3942 PB.10444.1 chr20 - 3582 1 incomplete-splice_match ADNP ENST00000396032.7 4581 4 950 50 no_subtype FALSE canonical NA NA NA None 8 7 0 FALSE 0 0 NA C coding 834 2502 26 2527 PB.10444.2 chr20 - 5588 3 full-splice_match ADNP ENST00000371602.8 6115 3 389 138 no_subtype FALSE canonical NA NA 39 None 2 19 1 FALSE 0 0 NA C coding 874 2622 616 3237 PB.2893.1 chr4 - 1564 8 novel_not_in_catalog CCNI novel NA NA NA NA no_subtype FALSE canonical NA NA 501 None 264 4 0 TRUE 0 0 NA B coding 340 1020 545 1564 PB.2893.3 chr4 - 1654 6 novel_not_in_catalog CCNI novel NA NA NA NA no_subtype FALSE canonical NA NA 505 None 4 8 0 TRUE 0 0 NA B coding 305 915 549 1463 PB.2893.5 chr4 - 1701 7 novel_not_in_catalog CCNI novel NA NA NA NA no_subtype TRUE non_canonical NA NA 520 None 2 9 2 TRUE 0 0 NA B coding 189 567 946 1512 PB.4317.1 chr7 - 1543 2 novel_not_in_catalog MACC1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1170 None 5 6 0 TRUE 0 0 NA A coding 66 198 155 352 PB.2893.6 chr4 - 1653 7 novel_not_in_catalog CCNI novel NA NA NA NA no_subtype FALSE canonical NA NA 521 None 2 7 1 TRUE 0 0 NA B coding 300 900 565 1464 PB.2893.8 chr4 - 1647 7 novel_not_in_catalog CCNI novel NA NA NA NA no_subtype FALSE non_canonical NA NA 521 None 3 7 2 TRUE 0 0 NA B coding 228 684 843 1526 PB.8988.4 chr17 + 1414 6 incomplete-splice_match WSB1 ENST00000467843.6 4187 9 62 2711 3prime_fragment FALSE canonical NA NA 952 None 5 3 0 FALSE 0 0 NA C coding 244 732 242 973 PB.8988.2 chr17 + 1422 2 novel_not_in_catalog WSB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 406 None 5 14 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.8988.3 chr17 + 2978 10 novel_not_in_catalog WSB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1564 None 2 18 1 FALSE 0 0 NA C coding 244 732 283 1014 PB.8988.1 chr17 + 2601 9 full-splice_match WSB1 ENST00000262394.6 5139 9 235 2303 no_subtype FALSE canonical NA NA 1187 None 81 13 0 FALSE 0 0 NA C coding 421 1263 82 1344 PB.10949.1 chrX + 1307 7 novel_not_in_catalog EBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 828 None 5 5 2 TRUE 0 0 NA A coding 230 690 360 1049 PB.9967.1 chr19 + 1472 7 full-splice_match SPINT2 ENST00000301244.11 1802 7 187 143 no_subtype FALSE canonical NA NA 840 None 127 2 0 FALSE 0 0 NA A coding 252 756 249 1004 PB.9615.2 chr18 - 5456 4 novel_not_in_catalog MBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2765 None 2 48 2 TRUE 0 0 NA B coding 124 372 2254 2625 PB.3233.1 chr5 + 1480 2 antisense novelGene_CCL28_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 640 None 2 12 1 FALSE 0 0 NA A coding 140 420 952 1371 PB.9615.4 chr18 - 1476 4 novel_not_in_catalog MBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 204 None 50 13 1 FALSE 0 0 NA B coding 197 591 240 830 PB.9615.5 chr18 - 1464 4 novel_not_in_catalog MBP novel NA NA NA NA no_subtype FALSE canonical NA NA 204 None 42 9 1 FALSE 0 0 NA B coding 197 591 221 811 PB.9615.6 chr18 - 2573 1 antisense novelGene_RP11-4B16.4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 15 0 FALSE 0 0 NA A coding 160 480 1722 2201 PB.335.5 chr1 - 3683 22 novel_not_in_catalog HECTD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 461 None 2 9 0 TRUE 0 0 NA C coding 888 2664 93 2756 PB.3405.2 chr5 + 2762 22 novel_not_in_catalog FER novel NA NA NA NA no_subtype FALSE canonical NA NA 2533 None 2 3 1 TRUE 0 0 NA B coding 822 2466 208 2673 PB.3405.1 chr5 + 3259 6 novel_not_in_catalog FER novel NA NA NA NA no_subtype FALSE canonical NA NA 855 None 4 16 2 TRUE 0 0 NA B coding 165 495 325 819 PB.9086.1 chr17 - 1663 10 full-splice_match PIP4K2B ENST00000619039.4 5734 10 386 3685 no_subtype TRUE canonical NA NA 254 None 8 1 0 FALSE 0 0 NA A coding 416 1248 96 1343 PB.335.1 chr1 - 3623 21 full-splice_match HECTD3 ENST00000372172.4 3610 21 -15 2 no_subtype FALSE canonical NA NA 456 None 7 8 0 FALSE 0 0 NA C coding 861 2583 88 2670 PB.335.3 chr1 - 3573 22 novel_not_in_catalog HECTD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 432 None 43 7 0 TRUE 0 0 NA C coding 861 2583 64 2646 PB.335.2 chr1 - 3806 21 novel_not_in_catalog HECTD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 451 None 11 12 0 TRUE 0 0 NA C coding 380 1140 1740 2879 PB.664.2 chr1 - 1771 8 novel_not_in_catalog CTSK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 209 None 2 5 0 TRUE 0 0 NA C coding 329 987 214 1200 PB.7877.1 chr14 - 3300 14 novel_not_in_catalog ITPK1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 152 None 2 16 3 TRUE 0 0 NA B coding 406 1218 295 1512 PB.3706.1 chr5 - 2840 1 full-splice_match TRIM52 ENST00000612671.1 4753 1 3144 -1231 no_subtype FALSE canonical NA NA NA None 9 20 0 FALSE 0 0 NA C coding 105 315 1783 2097 PB.7877.3 chr14 - 2989 10 novel_not_in_catalog ITPK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 174 None 2 8 0 TRUE 0 0 NA B coding 295 885 412 1296 PB.10350.1 chr20 + 1957 6 antisense novelGene_NFS1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1753 None 2 4 1 FALSE 0 0 NA A coding 124 372 553 924 PB.7877.5 chr14 - 3053 11 novel_not_in_catalog ITPK1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 237 None 2 12 1 TRUE 0 0 NA B coding 295 885 480 1364 PB.7877.6 chr14 - 3756 2 novel_not_in_catalog ITPK1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3272 None 5 20 0 TRUE 0 0 NA B coding 124 372 1821 2192 PB.7877.7 chr14 - 6121 1 genic_intron novelGene_854 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 30 0 FALSE 0 0 NA A coding 120 360 604 963 PB.7414.1 chr13 - 2803 5 full-splice_match UBL3 ENST00000380680.4 4384 5 311 1270 no_subtype FALSE canonical NA NA 862 None 36 16 0 FALSE 0 0 NA A coding 117 351 836 1186 PB.6611.1 chr11 - 1966 10 full-splice_match MMP1 ENST00000315274.6 1970 10 -27 31 no_subtype FALSE canonical NA NA 200 None 10 3 0 FALSE 0 0 NA A coding 469 1407 96 1502 PB.2174.3 chr3 - 1725 7 novel_not_in_catalog UQCRC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 78 None 2 7 2 TRUE 0 0 NA C coding 237 711 10 720 PB.4391.1 chr7 + 3032 2 novel_in_catalog MRPL32 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 140 None 13 16 0 FALSE 0 0 NA A coding 107 321 11 331 PB.3293.1 chr5 - 2817 11 full-splice_match TRIM23 ENST00000231524.13 4186 11 349 1020 no_subtype FALSE canonical NA NA 104 None 15 8 0 FALSE 0 0 NA A coding 574 1722 24 1745 PB.705.1 chr1 - 1373 1 antisense novelGene_IL6R_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 15 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6687.1 chr11 - 1587 1 full-splice_match H2AFX ENST00000530167.1 1614 1 -1 28 no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A coding 143 429 75 503 PB.7959.74 chr14 - 1499 8 fusion IGHA1,CH17-262H11.1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 93 None 2 13 5 TRUE 0 0 NA B coding 254 762 692 1453 PB.801.1 chr1 - 1661 6 full-splice_match DEDD ENST00000368006.7 2345 6 1 683 no_subtype FALSE canonical NA NA 117 None 10 7 0 FALSE 0 0 NA A coding 318 954 215 1168 PB.3098.4 chr4 + 3127 3 genic TLR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 131 None 2 4 0 FALSE 0 0 NA B coding 784 2352 148 2499 PB.876.1 chr1 + 2866 21 full-splice_match RABGAP1L ENST00000251507.8 2899 21 35 -2 no_subtype FALSE canonical NA NA 2572 None 49 3 0 FALSE 0 0 NA C coding 815 2445 140 2584 PB.6692.1 chr11 - 3057 12 full-splice_match USP2 ENST00000525735.1 1704 12 -36 -1317 no_subtype FALSE canonical NA NA 395 None 2 20 0 FALSE 0 0 NA A coding 396 1188 249 1436 PB.3098.1 chr4 + 2648 3 genic TLR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 137 None 59 1 0 FALSE 0 0 NA B coding 784 2352 154 2505 PB.1356.3 chr2 + 1513 1 genic_intron novelGene_578 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A coding 150 450 923 1372 PB.8400.1 chr16 + 2633 1 antisense novelGene_ZNF597_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1356.1 chr2 + 2509 10 full-splice_match REL ENST00000394479.3 2398 10 -54 -57 no_subtype FALSE canonical NA NA 1230 None 13 6 0 FALSE 0 0 NA A coding 587 1761 240 2000 PB.4778.1 chr8 + 1617 11 novel_not_in_catalog FBXO25 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1252 None 2 8 1 TRUE 0 0 NA A coding 358 1074 266 1339 PB.3047.1 chr4 + 3550 2 full-splice_match RAB33B ENST00000305626.5 4562 2 309 703 no_subtype FALSE canonical NA NA 329 None 7 22 0 FALSE 0 0 NA A coding 229 687 81 767 PB.3738.7 chr6 - 1504 1 novel_in_catalog NEDD9 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3738.2 chr6 - 2981 7 full-splice_match NEDD9 ENST00000379446.9 4536 7 14 1541 no_subtype FALSE canonical NA NA 165 None 61 7 0 FALSE 0 0 NA C coding 834 2502 154 2655 PB.3738.3 chr6 - 3177 8 full-splice_match NEDD9 ENST00000504387.5 3211 8 0 34 no_subtype FALSE canonical NA NA 210 None 20 10 0 FALSE 0 0 NA C coding 834 2502 363 2864 PB.4726.1 chr7 - 3291 18 full-splice_match EPHA1 ENST00000275815.3 3363 18 47 25 no_subtype FALSE canonical NA NA 122 None 3 5 1 FALSE 0 0 NA A coding 976 2928 41 2968 PB.7959.70 chr14 - 1447 7 fusion IGHV5-51,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 87 None 4 13 4 TRUE 0 0 NA B coding 275 825 42 866 PB.1785.2 chr2 + 2808 1 novel_in_catalog SATB2-AS1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2471.3 chr3 - 1578 13 novel_not_in_catalog MRPL3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 151 None 2 5 2 TRUE 0 0 NA B coding 348 1044 60 1103 PB.2287.1 chr3 + 3910 2 incomplete-splice_match KBTBD8 ENST00000417314.2 4680 4 762 8 internal_fragment FALSE canonical NA NA 629 None 2 14 0 FALSE 0 0 NA A coding 357 1071 20 1090 PB.4385.1 chr7 + 2874 7 novel_not_in_catalog RALA novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2510 None 2 22 1 TRUE 0 0 NA B coding 206 618 407 1024 PB.1865.2 chr2 + 4191 19 novel_in_catalog TTLL4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3640 None 3 2 0 FALSE 0 0 NA B coding 1199 3597 297 3893 PB.3283.1 chr5 + 2686 2 genic_intron novelGene_584 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 842 None 2 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4385.2 chr7 + 2748 7 novel_not_in_catalog RALA novel NA NA NA NA no_subtype FALSE canonical NA NA 2378 None 47 16 1 TRUE 0 0 NA B coding 206 618 269 886 PB.7867.1 chr14 + 2904 16 novel_not_in_catalog CPSF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2492 None 20 3 1 FALSE 0 0 NA B coding 782 2346 237 2582 PB.3607.2 chr5 - 2972 9 full-splice_match FAXDC2 ENST00000326080.9 3251 9 267 12 no_subtype FALSE canonical NA NA 157 None 47 11 0 FALSE 0 0 NA C coding 333 999 158 1156 PB.613.4 chr1 - 7074 13 incomplete-splice_match NOTCH2 ENST00000256646.6 11389 34 3784 531 5prime_fragment FALSE canonical NA NA 91 None 4 15 0 FALSE 0 0 NA B coding 1230 3690 160 3849 PB.1381.1 chr2 - 1415 6 full-splice_match RAB1A ENST00000409784.7 2447 6 1 1031 no_subtype FALSE canonical NA NA 213 None 21 0 0 FALSE 0 0 NA C coding 205 615 191 805 PB.2017.1 chr3 + 3128 13 novel_not_in_catalog TMEM43 novel NA NA NA NA no_subtype FALSE canonical NA NA 1049 None 116 10 0 TRUE 0 0 NA B coding 400 1200 50 1249 PB.2017.2 chr3 + 3088 12 novel_not_in_catalog TMEM43 novel NA NA NA NA no_subtype FALSE canonical NA NA 1008 None 3 10 0 TRUE 0 0 NA B coding 350 1050 159 1208 PB.3826.2 chr6 - 1823 7 novel_not_in_catalog NEU1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 267 None 15 6 1 TRUE 0 0 NA B coding 415 1245 109 1353 PB.7959.108 chr14 - 1519 9 fusion IGHV5-51,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 103 None 2 16 3 TRUE 0 0 NA B coding 261 783 692 1474 PB.3826.1 chr6 - 1835 8 novel_not_in_catalog NEU1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 267 None 11 7 2 TRUE 0 0 NA B coding 415 1245 109 1353 PB.5117.1 chr8 + 2839 3 full-splice_match TRIB1 ENST00000311922.3 3635 3 788 8 no_subtype FALSE canonical NA NA 447 None 4 11 0 FALSE 0 0 NA A coding 206 618 293 910 PB.3966.1 chr6 + 957 5 full-splice_match TMEM14A ENST00000211314.4 992 5 31 4 no_subtype FALSE canonical NA NA 382 None 2 1 0 FALSE 0 0 NA A coding 99 297 123 419 PB.7959.102 chr14 - 1495 7 fusion IGHA1,IGHV1-3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 94 None 2 17 3 TRUE 0 0 NA B coding 289 867 49 915 PB.7959.103 chr14 - 1519 7 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 2 25 3 TRUE 0 0 NA B coding 466 1398 77 1474 PB.7959.100 chr14 - 1478 7 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 14 2 TRUE 0 0 NA B coding 254 762 672 1433 PB.10467.3 chr20 + 3283 16 novel_not_in_catalog NELFCD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2829 None 2 10 1 TRUE 0 0 NA B coding 442 1326 1536 2861 PB.7959.107 chr14 - 1482 8 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 120 None 2 12 4 TRUE 0 0 NA B coding 251 753 685 1437 PB.7959.104 chr14 - 1457 8 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 22 5 TRUE 0 0 NA B coding 251 753 660 1412 PB.6979.1 chr12 - 2704 12 novel_in_catalog GALNT6 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 36 None 8 6 0 FALSE 0 0 NA B coding 614 1842 255 2096 PB.10466.1 chr20 + 1622 14 novel_not_in_catalog GNAS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1123 None 4 3 0 TRUE 0 0 NA C coding 394 1182 86 1267 PB.10466.3 chr20 + 1604 14 novel_not_in_catalog GNAS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1100 None 3 2 1 TRUE 0 0 NA C coding 394 1182 63 1244 PB.3967.1 chr6 - 6122 14 novel_not_in_catalog ICK novel NA NA NA NA no_subtype FALSE canonical NA NA 206 None 2 22 1 FALSE 0 0 NA A coding 450 1350 379 1728 PB.7652.1 chr14 + 3910 2 incomplete-splice_match ARHGAP5 ENST00000556611.5 4824 7 41 873 3prime_fragment FALSE canonical NA NA 46 None 4 2 0 FALSE 0 0 NA B coding 1231 3693 218 3910 PB.7652.3 chr14 + 3694 1 incomplete-splice_match ARHGAP5 ENST00000556611.5 4824 7 262 869 no_subtype FALSE canonical NA NA NA None 2 0 0 FALSE 0 0 NA B coding 1103 3309 384 3692 PB.7652.2 chr14 + 3999 2 incomplete-splice_match ARHGAP5 ENST00000345122.7 9604 7 17 5588 3prime_fragment FALSE canonical NA NA 130 None 3 0 0 FALSE 0 0 NA B coding 1232 3696 302 3997 PB.769.5 chr1 + 2445 6 novel_in_catalog MNDA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2138 None 69 10 1 FALSE 0 0 NA C coding 173 519 1665 2183 PB.10466.8 chr20 + 1481 13 full-splice_match GNAS ENST00000371085.7 1972 13 485 6 no_subtype FALSE canonical NA NA 977 None 9 3 1 FALSE 0 0 NA C coding 335 1005 117 1121 PB.5498.1 chr9 + 2680 1 genic_intron novelGene_1083 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.612.1 chr1 - 2022 10 full-splice_match HMGCS2 ENST00000369406.7 2428 10 17 389 no_subtype FALSE canonical NA NA 137 None 8 0 0 FALSE 0 0 NA A coding 508 1524 34 1557 PB.3730.1 chr6 + 2921 10 novel_not_in_catalog SNRNP48 novel NA NA NA NA no_subtype FALSE canonical NA NA 1164 None 4 23 1 TRUE 0 0 NA B coding 339 1017 38 1054 PB.3730.2 chr6 + 2869 10 novel_not_in_catalog SNRNP48 novel NA NA NA NA no_subtype TRUE canonical NA NA 2833 None 2 14 1 TRUE 0 0 NA B coding 144 432 44 475 PB.795.13 chr1 - 3544 4 genic_intron novelGene_1279 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 582 None 21 20 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.795.12 chr1 - 3572 5 genic_intron novelGene_1279 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 572 None 17 24 4 FALSE 0 0 NA B non_coding NA NA NA NA PB.795.10 chr1 - 3152 4 novel_not_in_catalog CD48 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 155 None 2 15 1 TRUE 0 0 NA C coding 252 756 74 829 PB.2876.3 chr4 - 689 3 full-splice_match PPBP ENST00000296028.3 715 3 7 19 no_subtype FALSE canonical NA NA 235 None 14 0 0 FALSE 0 0 NA C coding 128 384 88 471 PB.2876.1 chr4 - 2312 4 novel_not_in_catalog PPBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 235 None 15 5 0 TRUE 0 0 NA C coding 128 384 88 471 PB.7161.1 chr12 + 2055 3 full-splice_match SOCS2 ENST00000536696.6 1065 3 5 -995 no_subtype FALSE canonical NA NA 584 None 2 7 0 FALSE 0 0 NA C coding 198 594 446 1039 PB.7161.2 chr12 + 1989 1 incomplete-splice_match SOCS2 ENST00000548537.1 3733 2 1738 7 no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA C coding 146 438 528 965 PB.1409.1 chr2 + 1770 10 incomplete-splice_match MPHOSPH10 ENST00000244230.6 2484 11 315 399 3prime_fragment FALSE canonical NA NA 1702 None 2 1 0 FALSE 0 0 NA A coding 577 1731 38 1768 PB.8783.1 chr16 + 5467 2 novel_not_in_catalog CRISPLD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1506 None 2 28 0 TRUE 0 0 NA B coding 116 348 4637 4984 PB.2593.2 chr3 - 3838 1 novel_in_catalog TNFSF10 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 7 20 0 FALSE 0 0 NA C coding 93 279 50 328 PB.3710.1 chr6 - 1434 7 full-splice_match SERPINB1 ENST00000380739.5 2619 7 7 1178 no_subtype FALSE canonical NA NA 188 None 63 2 0 FALSE 0 0 NA A coding 379 1137 197 1333 PB.4742.2 chr7 + 1897 2 novel_in_catalog GIMAP4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 75 None 10 5 0 FALSE 0 0 NA C coding 329 987 18 1004 PB.9534.1 chr18 - 905 5 full-splice_match INO80C ENST00000334598.11 974 5 62 7 no_subtype FALSE canonical NA NA 211 None 3 3 0 FALSE 0 0 NA A coding 192 576 56 631 PB.4742.1 chr7 + 1940 3 full-splice_match GIMAP4 ENST00000255945.3 2060 3 116 4 no_subtype FALSE canonical NA NA 117 None 64 21 0 FALSE 0 0 NA C coding 329 987 60 1046 PB.1138.3 chr1 + 2879 4 novel_not_in_catalog MTR novel NA NA NA NA no_subtype FALSE canonical NA NA 1826 None 2 14 0 TRUE 0 0 NA B coding 138 414 676 1089 PB.3616.1 chr5 - 2764 2 antisense novelGene_CYFIP2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 158 None 2 15 0 FALSE 0 0 NA B coding 11 33 435 467 PB.10868.2 chrX + 1700 2 full-splice_match TMSB4X ENST00000380636.1 1702 2 0 2 no_subtype FALSE canonical NA NA 1252 None 13 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10868.1 chrX + 624 3 full-splice_match TMSB4X ENST00000451311.6 628 3 2 2 no_subtype FALSE canonical NA NA 175 None 61 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10190.1 chr19 - 3084 4 full-splice_match ZNF416 ENST00000196489.3 2561 4 19 -542 no_subtype FALSE canonical NA NA 237 None 7 8 0 FALSE 0 0 NA A coding 594 1782 205 1986 PB.2471.4 chr3 - 1629 15 novel_not_in_catalog MRPL3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 222 None 6 8 4 TRUE 0 0 NA B coding 348 1044 131 1174 PB.4645.4 chr7 + 1480 1 incomplete-splice_match CALU ENST00000535011.6 3210 6 1725 6 no_subtype FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA C coding 201 603 325 927 PB.778.5 chr1 - 5907 5 novel_not_in_catalog TAGLN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 181 None 2 45 3 TRUE 0 0 NA B coding 179 537 4008 4544 PB.778.6 chr1 - 3698 3 novel_not_in_catalog TAGLN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1869 None 7 27 2 TRUE 0 0 NA B coding 185 555 1565 2119 PB.778.1 chr1 - 1359 5 novel_not_in_catalog TAGLN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 58 None 256 3 0 FALSE 0 0 NA B coding 199 597 77 673 PB.778.2 chr1 - 1381 5 novel_not_in_catalog TAGLN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 69 None 3 2 0 FALSE 0 0 NA B coding 199 597 98 694 PB.778.3 chr1 - 1338 5 novel_not_in_catalog TAGLN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 40 None 7 3 0 TRUE 0 0 NA B coding 199 597 55 651 PB.9282.1 chr17 + 1343 9 full-splice_match METTL2A ENST00000311506.9 2537 9 32 1162 no_subtype TRUE canonical NA NA 986 None 8 3 0 FALSE 0 0 NA A coding 378 1134 5 1138 PB.868.1 chr1 - 2933 1 genic_intron novelGene_1327 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8462.1 chr16 - 1453 3 novel_not_in_catalog XYLT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 236 None 2 9 1 TRUE 0 0 NA B coding 35 105 237 341 PB.7277.1 chr12 - 3051 20 full-splice_match DDX54 ENST00000314045.11 4380 20 5 1324 no_subtype FALSE canonical NA NA 197 None 83 2 0 FALSE 0 0 NA A coding 866 2598 72 2669 PB.5868.1 chr10 + 5764 2 genic_intron novelGene_735 novel NA NA NA NA no_subtype FALSE canonical NA NA 3316 None 3 25 1 FALSE 0 0 NA A coding 203 609 3351 3959 PB.4232.1 chr6 + 1820 1 antisense novelGene_SOD2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1613.1 chr2 + 1620 14 full-splice_match KYNU ENST00000264170.8 15316 14 166 13530 no_subtype FALSE canonical NA NA 1364 None 26 0 0 FALSE 0 0 NA A coding 465 1395 93 1487 PB.6134.1 chr11 - 1476 1 genic AC132217.4 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 10 11 0 FALSE 0 0 NA A coding 113 339 881 1219 PB.1897.1 chr2 - 3926 2 full-splice_match IRS1 ENST00000305123.5 9705 2 1037 4742 no_subtype FALSE canonical NA NA 3734 None 2 3 0 FALSE 0 0 NA A coding 1218 3654 57 3710 PB.6781.2 chr12 + 2086 10 novel_in_catalog LTBR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1181 None 3 4 1 FALSE 0 0 NA C coding 430 1290 167 1456 PB.6781.1 chr12 + 2068 10 full-splice_match LTBR ENST00000228918.8 2260 10 192 0 no_subtype FALSE canonical NA NA 1164 None 21 3 0 FALSE 0 0 NA C coding 435 1305 135 1439 PB.4032.1 chr6 - 1493 1 incomplete-splice_match BACH2 ENST00000537989.5 9108 7 3887 3729 no_subtype FALSE canonical NA NA NA None 4 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4433.1 chr7 + 3170 4 full-splice_match ZNF92 ENST00000328747.11 3210 4 41 -1 no_subtype FALSE canonical NA NA 384 None 14 20 0 FALSE 0 0 NA C coding 586 1758 159 1916 PB.4065.1 chr6 + 2672 1 genic_intron novelGene_979 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 22 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4433.3 chr7 + 3007 3 incomplete-splice_match ZNF92 ENST00000328747.11 3210 4 204 -1 internal_fragment FALSE canonical NA NA 221 None 4 16 0 FALSE 0 0 NA C coding 554 1662 92 1753 PB.4433.2 chr7 + 1743 2 novel_not_in_catalog ZNF92 novel NA NA NA NA no_subtype FALSE canonical NA NA 1422 None 2 9 0 TRUE 0 0 NA C coding 103 309 160 468 PB.1186.1 chr2 + 3997 4 full-splice_match KLF11 ENST00000305883.5 4030 4 25 8 no_subtype TRUE canonical NA NA 1395 None 13 23 0 FALSE 0 0 NA A coding 512 1536 138 1673 PB.4418.17 chr7 + 2683 1 incomplete-splice_match IKZF1 ENST00000346667.8 5376 3 1771 923 no_subtype FALSE canonical NA NA NA None 6 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1162.1 chr1 - 1769 5 novel_not_in_catalog ZNF669 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 108 None 2 26 2 TRUE 0 0 NA B coding 341 1023 156 1178 PB.4848.2 chr8 + 5880 3 novel_not_in_catalog PPP2R2A novel NA NA NA NA no_subtype FALSE canonical NA NA 2046 None 2 44 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.4848.1 chr8 + 3896 10 full-splice_match PPP2R2A ENST00000380737.7 3940 10 38 6 no_subtype FALSE canonical NA NA 1355 None 11 17 0 FALSE 0 0 NA C coding 447 1341 292 1632 PB.7109.1 chr12 + 1181 5 novel_not_in_catalog LYZ novel NA NA NA NA no_subtype FALSE canonical NA NA 742 None 61 3 0 TRUE 0 0 NA A coding 148 444 27 470 PB.4418.14 chr7 + 3068 4 novel_in_catalog IKZF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 430 None 2 5 0 FALSE 0 0 NA B coding 290 870 268 1137 PB.1162.7 chr1 - 1665 3 novel_not_in_catalog ZNF669 novel NA NA NA NA no_subtype FALSE canonical NA NA 140 None 2 15 1 TRUE 0 0 NA B coding 222 666 418 1083 PB.1162.6 chr1 - 1406 4 novel_not_in_catalog ZNF669 novel NA NA NA NA no_subtype FALSE canonical NA NA 107 None 4 6 1 TRUE 0 0 NA B coding 341 1023 155 1177 PB.9109.4 chr17 + 1844 2 genic_intron novelGene_401 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 587 None 3 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9109.6 chr17 + 2831 12 full-splice_match CDC6 ENST00000209728.8 4810 12 238 1741 no_subtype FALSE canonical NA NA 1826 None 5 6 0 FALSE 0 0 NA A coding 560 1680 234 1913 PB.9109.7 chr17 + 3356 9 full-splice_match RARA ENST00000394089.6 2024 9 -23 -1309 no_subtype FALSE canonical NA NA 1724 None 10 13 0 FALSE 0 0 NA C coding 462 1386 554 1939 PB.8864.1 chr17 + 3440 26 novel_not_in_catalog PLD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2650 None 5 6 0 TRUE 0 0 NA A coding 933 2799 74 2872 PB.9109.1 chr17 + 5501 10 novel_not_in_catalog WIPF2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3274 None 3 30 2 TRUE 0 0 NA B coding 440 1320 379 1698 PB.6886.1 chr12 + 3523 13 novel_not_in_catalog FAR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1549 None 20 14 0 TRUE 0 0 NA A coding 515 1545 165 1709 PB.7608.19 chr14 + 1376 8 fusion TRAC,TRAV12-3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 830 None 2 15 3 TRUE 0 0 NA B coding 182 546 281 826 PB.7608.17 chr14 + 1471 7 fusion TRAC,TRAV12-3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 925 None 4 8 2 TRUE 0 0 NA B coding 127 381 112 492 PB.7608.15 chr14 + 1398 7 fusion TRAC,TRAV9-2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 861 None 3 3 1 TRUE 0 0 NA A coding 265 795 63 857 PB.7608.12 chr14 + 1502 7 fusion TRAV8-4,TRAC novel NA NA NA NA no_subtype FALSE canonical NA NA 954 None 2 7 2 TRUE 0 0 NA B coding 144 432 130 561 PB.9109.9 chr17 + 3095 8 full-splice_match RARA ENST00000394081.7 2285 8 36 -846 no_subtype FALSE canonical NA NA 1462 None 11 28 2 FALSE 0 0 NA C coding 457 1371 307 1677 PB.7608.10 chr14 + 1570 8 fusion TRAV8-4,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1024 None 6 10 2 TRUE 0 0 NA B coding 136 408 204 611 PB.7608.11 chr14 + 1521 8 fusion TRAV8-4,TRAC novel NA NA NA NA no_subtype TRUE non_canonical NA NA 978 None 2 6 1 TRUE 0 0 NA B coding 131 393 173 565 PB.2001.1 chr3 + 3756 2 genic_intron novelGene_90 novel NA NA NA NA no_subtype TRUE canonical NA NA 3526 None 3 20 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1520.1 chr2 + 3624 3 novel_not_in_catalog MAP4K4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1773 None 2 25 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.4447.1 chr7 - 1446 1 novel_in_catalog BAZ1B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8549.3 chr16 + 1360 9 full-splice_match ALDOA ENST00000564546.5 2104 9 735 9 no_subtype FALSE canonical NA NA 1065 None 945 1 0 FALSE 0 0 NA C coding 364 1092 67 1158 PB.8549.2 chr16 + 1402 9 full-splice_match ALDOA ENST00000563060.6 1550 9 145 3 no_subtype FALSE canonical NA NA 1107 None 3 0 0 FALSE 0 0 NA C coding 364 1092 109 1200 PB.8549.1 chr16 + 1422 10 incomplete-splice_match ALDOA ENST00000338110.9 2384 14 959 3 internal_fragment FALSE canonical NA NA 1127 None 46 2 0 FALSE 0 0 NA C coding 364 1092 129 1220 PB.6789.4 chr12 + 2637 7 novel_in_catalog CD4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1134 None 2 8 0 FALSE 0 0 NA C coding 185 555 608 1162 PB.6789.3 chr12 + 2916 9 novel_in_catalog CD4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1415 None 2 6 0 FALSE 0 0 NA C coding 458 1374 70 1443 PB.6789.1 chr12 + 2951 10 full-splice_match CD4 ENST00000011653.8 3114 10 151 12 no_subtype FALSE canonical NA NA 1453 None 107 8 0 FALSE 0 0 NA C coding 458 1374 108 1481 PB.8549.4 chr16 + 2730 8 novel_in_catalog ALDOA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2436 None 4 8 0 FALSE 0 0 NA C coding 364 1092 1438 2529 PB.214.7 chr1 - 3928 22 novel_in_catalog PUM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 89 None 8 1 1 FALSE 0 0 NA C coding 1159 3477 101 3577 PB.214.6 chr1 - 3785 21 novel_not_in_catalog PUM1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 80 None 5 3 2 TRUE 0 0 NA C coding 969 2907 528 3434 PB.214.5 chr1 - 3315 19 novel_not_in_catalog PUM1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 79 None 2 0 0 TRUE 0 0 NA C coding 958 2874 91 2964 PB.8454.3 chr16 + 4104 25 novel_not_in_catalog PDXDC1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2435 None 6 20 0 TRUE 0 0 NA C coding 802 2406 287 2692 PB.8986.4 chr17 + 3615 1 novel_in_catalog MAP2K3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA B coding 117 351 181 531 PB.8986.5 chr17 + 3592 2 novel_not_in_catalog MAP2K3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 832 None 5 16 1 TRUE 0 0 NA B coding 108 324 826 1149 PB.9850.1 chr19 - 3214 25 novel_not_in_catalog EPS15L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 59 None 2 7 0 TRUE 0 0 NA C coding 819 2457 27 2483 PB.3336.1 chr5 + 3399 3 novel_not_in_catalog F2R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3123 None 12 11 0 TRUE 0 0 NA A coding 425 1275 165 1439 PB.2533.1 chr3 - 697 3 full-splice_match SERP1 ENST00000239944.6 3171 3 245 2229 no_subtype FALSE canonical NA NA 345 None 60 0 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4011.1 chr6 - 1828 11 novel_not_in_catalog UBE3D novel NA NA NA NA no_subtype TRUE canonical NA NA 108 None 3 2 0 TRUE 0 0 NA A coding 389 1167 32 1198 PB.4177.4 chr6 + 5583 2 novel_not_in_catalog STX11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3571 None 2 21 0 TRUE 0 0 NA C coding 287 861 3850 4710 PB.214.9 chr1 - 4027 22 full-splice_match PUM1 ENST00000426105.6 4043 22 -22 38 no_subtype FALSE canonical NA NA 102 None 52 0 0 FALSE 0 0 NA C coding 1188 3564 114 3677 PB.214.8 chr1 - 3998 22 novel_in_catalog PUM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 79 None 48 0 0 FALSE 0 0 NA C coding 1187 3561 91 3651 PB.6795.1 chr12 - 1360 9 novel_in_catalog PHB2 novel NA NA NA NA no_combination_of_known_junctions FALSE non_canonical NA NA 267 None 33 2 1 FALSE 0 0 NA B coding 317 951 141 1091 PB.6795.2 chr12 - 2854 7 novel_in_catalog PHB2 novel NA NA NA NA no_combination_of_known_junctions FALSE non_canonical NA NA 236 None 2 22 1 FALSE 0 0 NA B coding 217 651 1930 2580 PB.10077.1 chr19 - 2964 1 incomplete-splice_match ZC3H4 ENST00000601973.1 4895 8 1930 2 no_subtype FALSE canonical NA NA NA None 4 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8529.2 chr16 - 1565 10 full-splice_match TUFM ENST00000313511.7 2071 10 116 390 no_subtype FALSE canonical NA NA 75 None 205 1 0 FALSE 0 0 NA A coding 452 1356 33 1388 PB.8394.6 chr16 + 3097 11 novel_not_in_catalog MMP25 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1820 None 2 25 3 TRUE 0 0 NA B coding 478 1434 75 1508 PB.8394.5 chr16 + 3518 11 novel_not_in_catalog MMP25 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2241 None 163 32 2 TRUE 0 0 NA B coding 562 1686 244 1929 PB.8394.4 chr16 + 2601 10 novel_not_in_catalog MMP25 novel NA NA NA NA no_subtype FALSE canonical NA NA 1774 None 3 6 0 FALSE 0 0 NA B coding 540 1620 358 1977 PB.8394.2 chr16 + 4071 10 novel_not_in_catalog MMP25 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2794 None 2 27 1 TRUE 0 0 NA B coding 498 1494 989 2482 PB.8394.1 chr16 + 3512 12 novel_not_in_catalog MMP25 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2235 None 2 19 1 TRUE 0 0 NA B coding 562 1686 238 1923 PB.8041.1 chr15 - 6158 30 novel_not_in_catalog TP53BP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 78 None 13 3 1 TRUE 0 0 NA A coding 1977 5931 72 6002 PB.800.7 chr1 - 3969 12 novel_not_in_catalog ARHGAP30 novel NA NA NA NA no_subtype FALSE canonical NA NA 166 None 4 6 0 FALSE 0 0 NA C coding 1044 3132 70 3201 PB.7040.1 chr12 - 2968 24 novel_not_in_catalog STAT2 novel NA NA NA NA no_subtype TRUE canonical NA NA 56 None 2 11 4 FALSE 0 0 NA A coding 605 1815 64 1878 PB.2647.1 chr3 - 3900 5 antisense novelGene_RP11-443P15.2_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 399 None 3 18 4 FALSE 0 0 NA A coding 112 336 3564 3899 PB.5107.2 chr8 + 3756 24 novel_not_in_catalog FAM91A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2570 None 7 7 1 FALSE 0 0 NA A coding 596 1788 966 2753 PB.10478.2 chr20 - 2753 7 novel_not_in_catalog DIDO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 90 None 66 9 0 TRUE 0 0 NA B coding 562 1686 290 1975 PB.3677.3 chr5 - 1800 7 novel_not_in_catalog DOK3 novel NA NA NA NA no_subtype TRUE canonical NA NA 45 None 33 3 1 TRUE 0 0 NA B coding 440 1320 248 1567 PB.1358.1 chr2 - 3346 18 novel_in_catalog PUS10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 144 None 2 5 0 FALSE 0 0 NA C coding 529 1587 160 1746 PB.1358.2 chr2 - 3227 18 full-splice_match PUS10 ENST00000407787.5 1820 18 13 -1420 no_subtype FALSE canonical NA NA 32 None 2 5 0 FALSE 0 0 NA C coding 529 1587 48 1634 PB.1633.11 chr2 - 2614 1 full-splice_match ZEB2 ENST00000625161.1 3061 1 1673 -1226 no_subtype FALSE canonical NA NA NA None 7 9 0 FALSE 0 0 NA C coding 114 342 1119 1460 PB.10747.1 chr22 + 2595 18 full-splice_match SH3BP1 ENST00000357436.4 2852 18 243 14 no_subtype FALSE canonical NA NA 1763 None 72 5 0 FALSE 0 0 NA A coding 701 2103 71 2173 PB.5699.1 chr10 + 2831 15 novel_not_in_catalog STAM novel NA NA NA NA no_subtype FALSE canonical NA NA 1472 None 30 9 0 TRUE 0 0 NA A coding 540 1620 88 1707 PB.4852.4 chr8 + 3530 23 novel_not_in_catalog PTK2B novel NA NA NA NA no_subtype FALSE canonical NA NA 2690 None 7 5 0 TRUE 0 0 NA B coding 524 1572 1305 2876 PB.4852.5 chr8 - 6630 2 genic_intron novelGene_269 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3822 None 12 23 1 FALSE 0 0 NA A coding 203 609 5502 6110 PB.4852.2 chr8 + 4088 32 novel_not_in_catalog PTK2B novel NA NA NA NA no_subtype FALSE canonical NA NA 2998 None 18 6 0 TRUE 0 0 NA B coding 1009 3027 185 3211 PB.4852.3 chr8 + 2989 2 incomplete-splice_match PTK2B ENST00000522338.5 539 4 201 -2651 internal_fragment FALSE canonical NA NA 96 None 10 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4852.1 chr8 + 3906 31 novel_not_in_catalog PTK2B novel NA NA NA NA no_subtype FALSE canonical NA NA 2815 None 98 7 0 TRUE 0 0 NA B coding 967 2901 128 3028 PB.5191.1 chr8 - 2731 4 novel_not_in_catalog ZNF16 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 171 None 3 5 1 TRUE 0 0 NA A coding 692 2076 304 2379 PB.1633.13 chr2 - 2780 3 full-splice_match ZEB2 ENST00000465070.5 2949 3 158 11 no_subtype FALSE canonical NA NA 236 None 6 5 0 FALSE 0 0 NA C coding 58 174 306 479 PB.2785.1 chr4 - 2543 5 incomplete-splice_match ARAP2 ENST00000303965.8 7514 33 4962 9 5prime_fragment FALSE canonical NA NA 36 None 2 21 0 FALSE 0 0 NA B coding 207 621 20 640 PB.3607.3 chr5 - 2800 6 novel_in_catalog FAXDC2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 224 None 15 11 0 FALSE 0 0 NA C coding 188 564 416 979 PB.9535.1 chr18 + 1875 12 novel_not_in_catalog GALNT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1720 None 2 3 0 FALSE 0 0 NA A coding 559 1677 188 1864 PB.913.1 chr1 - 1633 4 full-splice_match ARPC5 ENST00000359856.10 7209 4 -29 5605 no_subtype FALSE canonical NA NA 239 None 275 4 0 FALSE 0 0 NA A coding 151 453 97 549 PB.725.1 chr1 + 2090 9 novel_not_in_catalog RUSC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1382 None 3 9 0 TRUE 0 0 NA A coding 208 624 925 1548 PB.1259.1 chr2 - 2683 5 novel_not_in_catalog DPY30 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 61 None 3 15 0 TRUE 0 0 NA A coding 113 339 615 953 PB.6979.2 chr12 - 2938 16 novel_not_in_catalog GALNT6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 49 None 2 6 2 TRUE 0 0 NA B coding 614 1842 485 2326 PB.9826.1 chr19 - 1467 11 full-splice_match DDX39A ENST00000242776.8 1471 11 30 -26 no_subtype FALSE canonical NA NA 68 None 58 2 0 FALSE 0 0 NA A coding 427 1281 73 1353 PB.9088.1 chr17 - 1535 2 genic_intron novelGene_387 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 927 None 3 10 1 FALSE 0 0 NA A coding 104 312 184 495 PB.9088.2 chr17 - 3569 6 genic_intron novelGene_388 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 237 None 2 25 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.3786.1 chr6 - 2828 17 novel_not_in_catalog CMAHP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 33 None 2 19 4 TRUE 0 0 NA B coding 486 1458 334 1791 PB.5482.2 chr9 - 2047 7 full-splice_match STOM ENST00000286713.6 3010 7 -37 1000 no_subtype FALSE canonical NA NA 116 None 220 9 0 FALSE 0 0 NA C coding 288 864 56 919 PB.4039.1 chr6 + 3933 7 novel_not_in_catalog FHL5 novel NA NA NA NA no_subtype FALSE canonical NA NA 1407 None 3 17 1 TRUE 0 0 NA A coding 284 852 255 1106 PB.3786.4 chr6 - 2807 15 novel_not_in_catalog CMAHP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 308 None 26 6 0 TRUE 0 0 NA B coding 591 1773 298 2070 PB.4504.2 chr7 + 3076 3 genic_intron novelGene_846 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3002 None 6 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6649.4 chr11 - 5824 24 novel_not_in_catalog USP28 novel NA NA NA NA no_subtype FALSE canonical NA NA 117 None 3 22 0 TRUE 0 0 NA B coding 861 2583 437 3019 PB.4540.1 chr7 - 2758 7 novel_not_in_catalog TRIM4 novel NA NA NA NA no_subtype TRUE canonical NA NA 517 None 74 7 0 FALSE 0 0 NA A coding 474 1422 125 1546 PB.6649.2 chr11 - 2480 8 incomplete-splice_match USP28 ENST00000544967.5 3498 15 1230 -212 5prime_fragment FALSE canonical NA NA 146 None 2 15 0 FALSE 0 0 NA B coding 340 1020 98 1117 PB.1321.1 chr2 - 2740 7 novel_not_in_catalog MCFD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 46 None 40 13 2 TRUE 0 0 NA B coding 144 432 59 490 PB.8235.1 chr15 + 4052 11 full-splice_match IDH3A ENST00000299518.6 4128 11 62 14 no_subtype FALSE canonical NA NA 1038 None 88 16 0 FALSE 0 0 NA C coding 366 1098 22 1119 PB.1937.2 chr2 + 1590 8 full-splice_match COPS8 ENST00000354371.6 4007 8 632 1785 no_subtype FALSE canonical NA NA 571 None 52 4 0 FALSE 0 0 NA C coding 209 627 22 648 PB.4969.2 chr8 - 4195 28 novel_not_in_catalog TRPA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 81 None 2 19 2 TRUE 0 0 NA A coding 1088 3264 60 3323 PB.1633.2 chr2 - 5426 10 full-splice_match ZEB2 ENST00000627532.2 9541 10 172 3943 no_subtype FALSE canonical NA NA 285 None 2 8 0 FALSE 0 0 NA C coding 1209 3627 370 3996 PB.1027.1 chr1 - 4400 9 full-splice_match IRF6 ENST00000367021.7 4306 9 -98 4 no_subtype FALSE canonical NA NA 196 None 18 10 0 FALSE 0 0 NA A coding 467 1401 272 1672 PB.1937.4 chr2 + 2996 9 novel_not_in_catalog COPS8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2681 None 2 11 1 TRUE 0 0 NA C coding 209 627 21 647 PB.9593.1 chr18 - 5767 1 genic_intron novelGene_602 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 46 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1616.1 chr2 + 2731 1 genic_intron novelGene_1204 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4472.1 chr7 - 1305 1 incomplete-splice_match YWHAG ENST00000307630.4 3750 2 2438 8 no_subtype FALSE canonical NA NA NA None 7 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4472.2 chr7 - 3702 3 novel_not_in_catalog YWHAG novel NA NA NA NA no_subtype FALSE canonical NA NA 274 None 38 17 0 TRUE 0 0 NA B coding 247 741 184 924 PB.10473.2 chr20 + 3868 16 novel_not_in_catalog OSBPL2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3080 None 12 16 2 TRUE 0 0 NA C coding 480 1440 162 1601 PB.2779.1 chr4 - 5883 1 genic_intron novelGene_253 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A coding 110 330 2954 3283 PB.3842.1 chr6 - 1171 6 full-splice_match HLA-DRB1 ENST00000360004.5 1229 6 41 17 no_subtype FALSE canonical NA NA 165 None 5 10 0 FALSE 0 0 NA A coding 266 798 66 863 PB.10473.1 chr20 + 2601 14 full-splice_match OSBPL2 ENST00000313733.7 4009 14 79 1329 no_subtype FALSE canonical NA NA 1502 None 3 2 0 FALSE 0 0 NA C coding 480 1440 163 1602 PB.711.1 chr1 + 2645 2 genic RP11-307C12.12 novel NA NA NA NA no_subtype FALSE canonical NA NA 142 None 2 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1633.7 chr2 - 3864 3 full-splice_match ZEB2 ENST00000472146.5 3837 3 -34 7 no_subtype FALSE canonical NA NA 215 None 3 6 0 FALSE 0 0 NA C coding 128 384 285 668 PB.6655.1 chr11 - 1777 14 full-splice_match ZPR1 ENST00000227322.7 6566 14 23 4766 no_subtype TRUE canonical NA NA 208 None 30 4 0 FALSE 0 0 NA A coding 459 1377 38 1414 PB.7131.1 chr12 + 2759 2 novel_not_in_catalog ZDHHC17 novel NA NA NA NA no_subtype TRUE canonical NA NA 1420 None 2 20 1 TRUE 0 0 NA A coding 115 345 21 365 PB.422.2 chr1 - 3201 1 novel_in_catalog SLC35D1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2799.1 chr4 - 2648 2 full-splice_match TLR10 ENST00000361424.6 3484 2 35 801 no_subtype FALSE canonical NA NA 35 None 14 1 0 FALSE 0 0 NA A coding 797 2391 140 2530 PB.2019.10 chr3 + 6584 15 novel_not_in_catalog SLC6A6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2105 None 6 30 0 TRUE 0 0 NA B coding 649 1947 297 2243 PB.2200.3 chr3 - 2932 6 full-splice_match IP6K1 ENST00000321599.8 4456 6 -19 1543 no_subtype FALSE canonical NA NA 193 None 2 4 0 FALSE 0 0 NA A coding 435 1305 340 1644 PB.1775.2 chr2 + 2654 2 genic_intron novelGene_1368 novel NA NA NA NA no_subtype TRUE canonical NA NA 1226 None 3 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2556.1 chr3 + 3563 16 full-splice_match MFSD1 ENST00000622669.4 2361 16 222 -1424 no_subtype FALSE canonical NA NA 1399 None 91 11 0 FALSE 0 0 NA C coding 465 1395 6 1400 PB.8626.1 chr16 + 1679 16 full-splice_match CETP ENST00000200676.7 1791 16 112 0 no_subtype FALSE canonical NA NA 1425 None 5 0 0 FALSE 0 0 NA C coding 493 1479 19 1497 PB.8626.2 chr16 + 1717 3 novel_not_in_catalog CETP novel NA NA NA NA no_subtype FALSE canonical NA NA 1468 None 2 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10332.1 chr20 - 1436 9 full-splice_match EIF2S2 ENST00000374980.2 2656 9 75 1145 no_subtype FALSE canonical NA NA 162 None 53 2 0 FALSE 0 0 NA C coding 333 999 148 1146 PB.3695.2 chr5 + 2927 8 novel_not_in_catalog SQSTM1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1821 None 5 30 0 TRUE 0 0 NA C coding 390 1170 33 1202 PB.2674.4 chr3 + 3285 34 novel_not_in_catalog OPA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3164 None 2 13 5 TRUE 0 0 NA B coding 694 2082 1071 3152 PB.10332.2 chr20 - 2893 1 novel_in_catalog EIF2S2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 30 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7680.1 chr14 + 1436 4 full-splice_match LRR1 ENST00000298288.10 1745 4 303 6 no_subtype FALSE canonical NA NA 1025 None 2 2 0 FALSE 0 0 NA A coding 414 1242 22 1263 PB.10634.6 chr22 + 1498 9 novel_not_in_catalog COMT novel NA NA NA NA no_subtype FALSE canonical NA NA 1024 None 3 5 0 TRUE 0 0 NA B coding 271 813 410 1222 PB.10634.4 chr22 + 1433 7 novel_not_in_catalog COMT novel NA NA NA NA no_subtype FALSE canonical NA NA 955 None 2 10 2 FALSE 0 0 NA B coding 271 813 341 1153 PB.10634.5 chr22 + 1283 6 novel_not_in_catalog COMT novel NA NA NA NA no_subtype FALSE non_canonical NA NA 809 None 2 6 1 FALSE 0 0 NA B coding 221 663 345 1007 PB.10634.2 chr22 + 1387 7 novel_not_in_catalog COMT novel NA NA NA NA no_subtype FALSE canonical NA NA 913 None 12 5 0 FALSE 0 0 NA B coding 271 813 299 1111 PB.10634.3 chr22 + 1181 5 novel_in_catalog COMT novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 707 None 5 5 0 FALSE 0 0 NA B coding 271 813 93 905 PB.8856.1 chr17 - 1362 6 full-splice_match UBE2G1 ENST00000396981.6 3974 6 -161 2773 no_subtype FALSE canonical NA NA 373 None 10 3 0 FALSE 0 0 NA C coding 170 510 328 837 PB.8157.4 chr15 - 3264 21 novel_in_catalog DPP8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 222 None 8 1 1 FALSE 0 0 NA C coding 898 2694 322 3015 PB.10761.3 chr22 - 3551 5 novel_in_catalog JOSD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 31 None 2 23 1 FALSE 0 0 NA C coding 202 606 663 1268 PB.10761.2 chr22 - 2782 4 full-splice_match JOSD1 ENST00000216039.9 3648 4 787 79 no_subtype FALSE canonical NA NA 78 None 24 14 0 FALSE 0 0 NA C coding 135 405 95 499 PB.1907.1 chr2 + 2628 19 novel_not_in_catalog SP140L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1697 None 23 5 1 TRUE 0 0 NA B coding 345 1035 82 1116 PB.10761.4 chr22 - 3428 3 novel_not_in_catalog JOSD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 862 None 2 17 1 FALSE 0 0 NA C coding 157 471 678 1148 PB.1384.8 chr2 + 2638 1 incomplete-splice_match ACTR2 ENST00000260641.9 3861 9 1213 11 no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3649.1 chr5 + 2808 10 full-splice_match ERGIC1 ENST00000393784.7 2881 10 64 9 no_subtype FALSE canonical NA NA 840 None 18 12 0 FALSE 0 0 NA A coding 290 870 76 945 PB.6991.21 chr12 - 3120 15 novel_in_catalog ITGB7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 50 None 2 4 0 FALSE 0 0 NA C coding 359 1077 177 1253 PB.6442.1 chr11 - 2663 4 full-splice_match RNASEH2C ENST00000308418.8 2794 4 127 4 no_subtype FALSE canonical NA NA 234 None 4 20 0 FALSE 0 0 NA A coding 164 492 63 554 PB.10992.1 chrX + 1326 5 full-splice_match TSR2 ENST00000375151.4 1534 5 14 194 no_subtype FALSE canonical NA NA 448 None 37 4 0 FALSE 0 0 NA C coding 191 573 8 580 PB.1384.1 chr2 + 3419 9 full-splice_match ACTR2 ENST00000260641.9 3861 9 87 355 no_subtype FALSE canonical NA NA 1084 None 262 17 0 FALSE 0 0 NA C coding 394 1182 71 1252 PB.10111.2 chr19 + 1273 11 novel_not_in_catalog PRMT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 989 None 15 0 0 TRUE 0 0 NA B coding 353 1059 12 1070 PB.10111.3 chr19 + 3165 13 fusion ADM5,PRMT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2703 None 3 21 1 TRUE 0 0 NA A coding 353 1059 10 1068 PB.10111.1 chr19 + 1440 13 novel_not_in_catalog PRMT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1157 None 6 2 0 TRUE 0 0 NA B coding 342 1026 213 1238 PB.4071.1 chr6 + 3242 1 incomplete-splice_match FOXO3 ENST00000343882.10 7308 4 2973 1094 no_subtype FALSE canonical NA NA NA None 4 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1193.2 chr2 + 2662 1 genic_intron novelGene_95 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A coding 123 369 21 389 PB.3525.1 chr5 - 2248 3 full-splice_match PFDN1 ENST00000507185.1 787 3 2 -1463 no_subtype FALSE canonical NA NA 44 None 2 19 0 FALSE 0 0 NA A coding 101 303 12 314 PB.2208.6 chr3 + 3069 14 novel_in_catalog SEMA3B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2232 None 2 7 0 FALSE 0 0 NA C coding 156 468 43 510 PB.2208.5 chr3 + 2832 16 novel_in_catalog SEMA3B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1994 None 9 4 0 FALSE 0 0 NA C coding 477 1431 41 1471 PB.2208.4 chr3 + 2826 17 novel_not_in_catalog SEMA3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1960 None 6 4 0 TRUE 0 0 NA C coding 774 2322 41 2362 PB.2208.3 chr3 + 3268 17 full-splice_match SEMA3B ENST00000433753.4 2755 17 32 -545 no_subtype FALSE canonical NA NA 1882 None 35 8 0 FALSE 0 0 NA C coding 748 2244 41 2284 PB.2208.1 chr3 + 2906 18 novel_in_catalog SEMA3B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2039 None 2 3 0 FALSE 0 0 NA C coding 748 2244 198 2441 PB.9320.2 chr17 + 2992 7 novel_not_in_catalog BPTF novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2948 None 2 6 0 TRUE 0 0 NA B coding 446 1338 15 1352 PB.7148.12 chr12 - 3663 1 full-splice_match GALNT4 ENST00000529983.2 5399 1 20 1716 no_subtype FALSE canonical NA NA NA None 30 9 0 FALSE 0 0 NA A coding 578 1734 238 1971 PB.2993.1 chr4 - 2519 12 full-splice_match PAPSS1 ENST00000265174.4 2731 12 208 4 no_subtype FALSE canonical NA NA 125 None 12 9 0 FALSE 0 0 NA A coding 624 1872 66 1937 PB.1436.3 chr2 + 2223 4 full-splice_match DOK1 ENST00000464613.1 1807 4 -383 -33 no_subtype FALSE canonical NA NA 984 None 2 8 0 FALSE 0 0 NA C coding 342 1026 763 1788 PB.7195.1 chr12 + 2890 5 novel_in_catalog DRAM1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 495 None 9 20 0 FALSE 0 0 NA C coding 159 477 61 537 PB.3204.1 chr5 + 4500 8 full-splice_match IL7R ENST00000303115.7 4626 8 113 13 no_subtype FALSE canonical NA NA 892 None 34 11 0 FALSE 0 0 NA C coding 459 1377 17 1393 PB.3204.2 chr5 + 3143 1 novel_in_catalog IL7R novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3204.3 chr5 + 1496 4 novel_in_catalog IL7R novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 382 None 2 5 1 FALSE 0 0 NA C coding 188 564 4 567 PB.472.1 chr1 + 2620 10 incomplete-splice_match GBP6 ENST00000370456.4 2987 11 78 289 internal_fragment FALSE canonical NA NA 1677 None 40 6 0 FALSE 0 0 NA A coding 633 1899 16 1914 PB.3204.6 chr5 + 2674 1 incomplete-splice_match IL7R ENST00000303115.7 4626 8 1939 14 no_subtype FALSE canonical NA NA NA None 40 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1769.1 chr2 - 3708 6 novel_in_catalog AC013264.1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1414 None 2 14 0 FALSE 0 0 NA B coding 124 372 1611 1982 PB.9036.1 chr17 - 2768 2 genic_intron novelGene_301 novel NA NA NA NA no_subtype FALSE canonical NA NA 2734 None 4 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1757.11 chr2 - 2596 23 full-splice_match STAT1 ENST00000392322.7 2716 23 10 110 no_subtype FALSE canonical NA NA 141 None 205 3 0 FALSE 0 0 NA C coding 712 2136 297 2432 PB.9200.4 chr17 + 2861 7 novel_in_catalog SP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1781 None 7 6 1 FALSE 0 0 NA C coding 606 1818 62 1879 PB.4949.3 chr8 + 2992 4 novel_not_in_catalog YTHDF3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1251 None 3 21 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.4949.2 chr8 + 2972 4 novel_in_catalog YTHDF3 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1910 None 2 12 1 FALSE 0 0 NA C coding 534 1602 330 1931 PB.4949.1 chr8 + 3011 5 full-splice_match YTHDF3 ENST00000539294.5 5163 5 110 2042 no_subtype FALSE canonical NA NA 1949 None 21 6 0 FALSE 0 0 NA C coding 585 1755 216 1970 PB.9200.5 chr17 + 2867 7 novel_not_in_catalog SP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1785 None 3 9 1 TRUE 0 0 NA C coding 495 1485 399 1883 PB.1243.1 chr2 + 2532 14 full-splice_match SLC4A1AP ENST00000618046.4 2544 14 2 10 no_subtype FALSE canonical NA NA 2203 None 12 3 0 FALSE 0 0 NA A coding 742 2226 25 2250 PB.1535.3 chr2 + 2904 3 genic_intron novelGene_980 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2624 None 2 32 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3798.1 chr6 + 1314 3 full-splice_match ABT1 ENST00000274849.2 2949 3 27 1608 no_subtype FALSE canonical NA NA 442 None 29 6 0 FALSE 0 0 NA A coding 272 816 5 820 PB.9195.1 chr17 + 2840 23 full-splice_match NPEPPS ENST00000322157.8 4353 23 351 1162 no_subtype FALSE canonical NA NA 2493 None 67 2 0 FALSE 0 0 NA A coding 875 2625 19 2643 PB.3695.1 chr5 + 2007 8 full-splice_match SQSTM1 ENST00000389805.8 2986 8 149 830 no_subtype FALSE canonical NA NA 1194 None 168 15 0 FALSE 0 0 NA C coding 440 1320 30 1349 PB.5667.1 chr10 + 1523 2 genic_intron novelGene_54 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 28 None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6600.2 chr11 + 1717 12 novel_not_in_catalog CEP57 novel NA NA NA NA no_subtype FALSE canonical NA NA 1699 None 4 2 0 TRUE 0 0 NA C coding 500 1500 186 1685 PB.3342.2 chr5 + 3659 9 full-splice_match SCAMP1 ENST00000621999.4 4509 9 57 793 no_subtype FALSE canonical NA NA 884 None 9 13 0 FALSE 0 0 NA C coding 338 1014 33 1046 PB.4562.3 chr7 + 2864 20 full-splice_match SRRT ENST00000618411.4 2893 20 28 1 no_subtype TRUE canonical NA NA 2674 None 13 6 1 FALSE 0 0 NA C coding 871 2613 135 2747 PB.7189.1 chr12 + 3926 19 novel_not_in_catalog SCYL2 novel NA NA NA NA no_subtype TRUE canonical NA NA 2321 None 11 10 0 TRUE 0 0 NA B coding 929 2787 177 2963 PB.613.1 chr1 - 2812 1 incomplete-splice_match NOTCH2 ENST00000256646.6 11389 34 7656 922 no_subtype FALSE canonical NA NA NA None 10 13 0 FALSE 0 0 NA B coding 110 330 535 864 PB.5062.1 chr8 + 1052 1 full-splice_match NRBF2P4 ENST00000520874.1 850 1 -142 -60 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A coding 145 435 275 709 PB.1007.7 chr1 + 1497 1 incomplete-splice_match RASSF5 ENST00000579942.2 3279 2 1766 17 no_subtype FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1130.1 chr1 + 1883 18 novel_not_in_catalog TBCE novel NA NA NA NA no_subtype FALSE canonical NA NA 1589 None 5 5 0 TRUE 0 0 NA B coding 527 1581 99 1679 PB.1007.5 chr1 + 2878 4 incomplete-splice_match RASSF5 ENST00000636182.1 3427 6 366 183 internal_fragment FALSE canonical NA NA 438 None 4 6 0 FALSE 0 0 NA C coding 191 573 16 588 PB.1007.4 chr1 + 5700 2 genic RASSF5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5531 None 29 21 0 TRUE 0 0 NA C coding 158 474 359 832 PB.1007.3 chr1 + 3192 5 full-splice_match RASSF5 ENST00000577571.5 3496 5 310 -6 no_subtype FALSE canonical NA NA 744 None 231 7 0 FALSE 0 0 NA C coding 265 795 100 894 PB.9749.1 chr19 - 1100 11 full-splice_match EIF3G ENST00000253108.8 1103 11 3 0 no_subtype FALSE canonical NA NA 60 None 2 1 0 FALSE 0 0 NA A coding 320 960 41 1000 PB.7107.5 chr12 - 3473 10 novel_not_in_catalog CPM novel NA NA NA NA no_subtype FALSE canonical NA NA 144 None 2 16 0 TRUE 0 0 NA B coding 443 1329 148 1476 PB.3232.4 chr5 - 2795 1 novel_in_catalog HMGCS1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3232.3 chr5 - 2781 11 novel_not_in_catalog HMGCS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 57 None 4 4 1 TRUE 0 0 NA C coding 520 1560 91 1650 PB.3232.2 chr5 - 2844 10 full-splice_match HMGCS1 ENST00000433297.2 3466 10 16 606 no_subtype FALSE canonical NA NA 141 None 18 6 0 FALSE 0 0 NA C coding 520 1560 152 1711 PB.3232.1 chr5 - 2817 11 full-splice_match HMGCS1 ENST00000325110.10 3506 11 83 606 no_subtype FALSE canonical NA NA 55 None 49 4 0 FALSE 0 0 NA C coding 520 1560 125 1684 PB.10995.9 chrX - 1814 10 full-splice_match ALAS2 ENST00000335854.8 1795 10 8 -27 no_subtype FALSE canonical NA NA 28 None 138 1 0 FALSE 0 0 NA C coding 550 1650 44 1693 PB.10105.1 chr19 + 1121 8 full-splice_match RPL13A ENST00000391857.8 1181 8 55 5 no_subtype FALSE canonical NA NA 546 None 32 2 0 FALSE 0 0 NA A coding 203 609 22 630 PB.10995.4 chrX - 1741 10 novel_in_catalog ALAS2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 40 None 11 1 0 FALSE 0 0 NA C coding 515 1545 76 1620 PB.9348.1 chr17 - 3502 4 full-splice_match CD300E ENST00000392619.1 3501 4 0 -1 no_subtype FALSE canonical NA NA 157 None 3 10 1 FALSE 0 0 NA A coding 232 696 37 732 PB.10995.1 chrX - 1920 11 novel_not_in_catalog ALAS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 28 None 1111 1 0 FALSE 0 0 NA C coding 562 1686 44 1729 PB.4233.3 chr6 - 981 6 full-splice_match SOD2 ENST00000367055.8 990 6 -49 58 no_subtype FALSE canonical NA NA 139 None 53 1 0 FALSE 0 0 NA C coding 222 666 117 782 PB.507.1 chr1 + 1729 9 full-splice_match SNX7 ENST00000306121.7 1734 9 0 5 no_subtype FALSE canonical NA NA 1287 None 3 2 0 FALSE 0 0 NA A coding 451 1353 10 1362 PB.4545.1 chr7 - 2412 15 full-splice_match MCM7 ENST00000303887.9 2957 15 543 2 no_subtype FALSE canonical NA NA 134 None 3 4 0 FALSE 0 0 NA A coding 719 2157 104 2260 PB.4233.7 chr6 - 3148 6 novel_not_in_catalog SOD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 73 None 4 17 1 TRUE 0 0 NA C coding 222 666 51 716 PB.4233.6 chr6 - 3157 6 novel_not_in_catalog SOD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 93 None 2 17 0 TRUE 0 0 NA C coding 222 666 71 736 PB.4233.5 chr6 - 1792 5 full-splice_match SOD2 ENST00000538183.6 14266 5 33 12441 no_subtype FALSE canonical NA NA 151 None 48 6 0 FALSE 0 0 NA C coding 222 666 129 794 PB.4233.4 chr6 - 3268 7 novel_not_in_catalog SOD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 165 None 2 46 2 TRUE 0 0 NA C coding 222 666 143 808 PB.1571.1 chr2 + 3515 2 genic_intron novelGene_1058 novel NA NA NA NA no_subtype FALSE canonical NA NA 296 None 4 28 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.307.2 chr1 + 1399 8 novel_not_in_catalog YBX1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1037 None 2 1 0 TRUE 0 0 NA C coding 127 381 623 1003 PB.946.48 chr1 + 2989 18 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE canonical NA NA 1901 None 2 12 0 FALSE 0 0 NA B coding 679 2037 138 2174 PB.7856.8 chr14 + 1318 1 genic CALM1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 37 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.416.1 chr1 + 2661 1 novel_in_catalog LEPROT novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 9 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2166.1 chr3 + 623 4 full-splice_match CAMP ENST00000296435.2 745 4 118 4 no_subtype FALSE canonical NA NA 428 None 5 0 0 FALSE 0 0 NA A coding 173 519 39 557 PB.10833.1 chr22 + 2590 1 genic_intron novelGene_463 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.307.1 chr1 + 1514 8 full-splice_match YBX1 ENST00000321358.11 1514 8 0 0 no_subtype FALSE canonical NA NA 1145 None 31 1 0 FALSE 0 0 NA C coding 324 972 140 1111 PB.9775.3 chr19 - 3651 12 novel_in_catalog KANK2 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical NA NA 48 None 2 11 0 FALSE 0 0 NA B coding 851 2553 128 2680 PB.9775.2 chr19 - 3751 14 novel_not_in_catalog KANK2 novel NA NA NA NA no_subtype TRUE canonical NA NA 49 None 109 9 1 TRUE 0 0 NA B coding 851 2553 376 2928 PB.9775.1 chr19 - 3844 14 novel_not_in_catalog KANK2 novel NA NA NA NA no_subtype TRUE canonical NA NA 61 None 28 9 1 TRUE 0 0 NA B coding 851 2553 322 2874 PB.2645.1 chr3 - 2772 5 novel_not_in_catalog TRA2B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 277 None 2 33 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.5445.1 chr9 + 2747 2 intergenic novelGene_1004 novel NA NA NA NA no_subtype FALSE canonical NA NA 1913 None 25 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2480.1 chr3 - 3220 9 novel_in_catalog SLCO2A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 139 None 2 10 0 FALSE 0 0 NA A coding 362 1086 122 1207 PB.5445.2 chr9 + 1685 3 intergenic novelGene_1004 novel NA NA NA NA no_subtype FALSE canonical NA NA 426 None 4 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4559.1 chr7 - 2018 1 incomplete-splice_match GIGYF1 ENST00000275732.5 6530 24 4510 3 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8154.1 chr15 - 2521 14 full-splice_match CLPX ENST00000300107.7 4695 14 -68 2242 no_subtype FALSE canonical NA NA 336 None 5 5 0 FALSE 0 0 NA A coding 633 1899 258 2156 PB.4955.1 chr8 - 1293 8 full-splice_match COPS5 ENST00000357849.8 1480 8 178 9 no_subtype FALSE canonical NA NA 286 None 6 0 0 FALSE 0 0 NA A coding 334 1002 144 1145 PB.2383.1 chr3 + 4539 15 full-splice_match ATP6V1A ENST00000273398.7 4591 15 45 7 no_subtype FALSE canonical NA NA 1824 None 9 16 0 FALSE 0 0 NA C coding 617 1851 64 1914 PB.4790.2 chr8 - 5162 3 novel_not_in_catalog PPP1R3B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 67 None 2 31 0 TRUE 0 0 NA B coding 284 852 96 947 PB.4790.1 chr8 - 2542 1 incomplete-splice_match PPP1R3B ENST00000310455.3 5548 2 2996 11 no_subtype FALSE canonical NA NA NA None 4 18 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3579.8 chr5 - 1664 2 novel_in_catalog CD74 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 132 None 3 5 0 FALSE 0 0 NA C coding 106 318 8 325 PB.6108.1 chr11 - 2808 23 novel_not_in_catalog ANO9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 62 None 11 4 0 FALSE 0 0 NA A coding 782 2346 57 2402 PB.9498.1 chr18 + 3378 9 full-splice_match SEH1L ENST00000262124.15 3494 9 104 12 no_subtype FALSE canonical NA NA 1093 None 52 18 0 FALSE 0 0 NA A coding 360 1080 24 1103 PB.7856.2 chr14 + 3178 5 novel_in_catalog CALM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3082 None 2 25 0 FALSE 0 0 NA C coding 106 318 203 520 PB.4836.4 chr8 - 3111 14 novel_not_in_catalog ENTPD4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 91 None 2 9 1 TRUE 0 0 NA B coding 608 1824 186 2009 PB.3579.2 chr5 - 1205 8 full-splice_match CD74 ENST00000353334.10 1449 8 173 71 no_subtype FALSE canonical NA NA 132 None 927 6 1 FALSE 0 0 NA C coding 232 696 8 703 PB.3579.1 chr5 - 1345 10 novel_not_in_catalog CD74 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 127 None 39 6 1 TRUE 0 0 NA C coding 232 696 3 698 PB.1118.1 chr1 + 2581 6 full-splice_match TSNAX ENST00000366639.8 2650 6 63 6 no_subtype FALSE canonical NA NA 590 None 38 8 0 FALSE 0 0 NA C coding 290 870 96 965 PB.3579.7 chr5 - 3662 6 full-splice_match CD74 ENST00000517752.5 816 6 -5 -2841 no_subtype FALSE canonical NA NA 127 None 4 17 1 FALSE 0 0 NA C coding 279 837 3 839 PB.4836.1 chr8 - 2998 15 novel_not_in_catalog ENTPD4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 85 None 20 8 0 TRUE 0 0 NA B coding 616 1848 183 2030 PB.4836.2 chr8 - 5525 15 novel_not_in_catalog ENTPD4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 139 None 5 31 0 TRUE 0 0 NA B coding 608 1824 237 2060 PB.4836.3 chr8 - 5491 13 novel_not_in_catalog ENTPD4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 186 None 3 30 0 TRUE 0 0 NA B coding 582 1746 281 2026 PB.9824.14 chr19 + 4134 18 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3508 None 2 20 1 TRUE 0 0 NA C coding 500 1500 2036 3535 PB.9824.15 chr19 + 3104 19 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2476 None 2 16 1 TRUE 0 0 NA C coding 577 1731 773 2503 PB.9824.16 chr19 + 2827 18 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2201 None 35 6 0 TRUE 0 0 NA C coding 716 2148 81 2228 PB.9824.17 chr19 + 2668 9 novel_in_catalog ADGRE5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2193 None 2 10 0 FALSE 0 0 NA C coding 219 657 1893 2549 PB.1984.1 chr3 + 2938 8 novel_not_in_catalog OGG1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2220 None 2 22 1 TRUE 0 0 NA C coding 295 885 968 1852 PB.1984.2 chr3 + 1601 7 full-splice_match OGG1 ENST00000344629.11 1744 7 32 111 no_subtype FALSE canonical NA NA 1259 None 2 7 0 FALSE 0 0 NA C coding 345 1035 312 1346 PB.10171.5 chr19 - 3438 25 novel_not_in_catalog PPP6R1 novel NA NA NA NA no_subtype FALSE canonical NA NA 36 None 5 3 0 TRUE 0 0 NA C coding 881 2643 48 2690 PB.10171.7 chr19 - 3432 24 novel_not_in_catalog PPP6R1 novel NA NA NA NA no_subtype FALSE canonical NA NA 36 None 3 6 1 FALSE 0 0 NA C coding 881 2643 43 2685 PB.9824.18 chr19 + 3012 19 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2382 None 2 6 0 FALSE 0 0 NA C coding 776 2328 82 2409 PB.9824.19 chr19 + 1631 11 novel_in_catalog ADGRE5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1155 None 2 5 0 FALSE 0 0 NA C coding 477 1431 81 1511 PB.10171.2 chr19 - 2982 24 full-splice_match PPP6R1 ENST00000412770.6 3961 24 473 506 no_subtype FALSE canonical NA NA 88 None 6 3 0 FALSE 0 0 NA C coding 881 2643 95 2737 PB.4757.1 chr7 + 3152 16 novel_not_in_catalog NUB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1755 None 59 10 1 TRUE 0 0 NA B coding 615 1845 87 1931 PB.4376.18 chr7 - 3540 1 genic_intron novelGene_364 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA A coding 132 396 1543 1938 PB.7959.193 chr14 - 1565 9 fusion IGHV3-62,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 124 None 2 6 4 TRUE 0 0 NA B coding 196 588 843 1430 PB.4221.2 chr6 - 2834 16 novel_in_catalog SERAC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 110 None 4 9 0 FALSE 0 0 NA C coding 584 1752 285 2036 PB.517.3 chr1 + 1671 1 antisense novelGene_Y_RNA_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.517.2 chr1 + 3343 16 novel_not_in_catalog CDC14A novel NA NA NA NA no_subtype FALSE canonical NA NA 2817 None 2 6 1 TRUE 0 0 NA B coding 623 1869 132 2000 PB.517.1 chr1 + 2950 7 novel_in_catalog CDC14A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 909 None 2 16 0 FALSE 0 0 NA B coding 183 549 454 1002 PB.4376.10 chr7 - 3437 1 full-splice_match MIR1200 ENST00000408398.1 76 1 -2936 -425 no_subtype FALSE canonical NA NA NA None 6 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4376.17 chr7 - 1573 15 novel_not_in_catalog ELMO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 190 None 2 1 0 TRUE 0 0 NA B coding 413 1239 264 1502 PB.517.6 chr1 + 4496 2 novel_not_in_catalog CDC14A novel NA NA NA NA no_subtype FALSE canonical NA NA 3970 None 3 16 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.3164.3 chr5 - 3924 14 full-splice_match LPCAT1 ENST00000283415.3 3966 14 25 17 no_subtype FALSE canonical NA NA 243 None 8 14 0 FALSE 0 0 NA C coding 534 1602 109 1710 PB.3164.2 chr5 - 3490 11 novel_not_in_catalog LPCAT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 273 None 4 19 1 FALSE 0 0 NA C coding 331 993 277 1269 PB.10551.1 chr21 - 2952 1 genic_intron novelGene_342 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3045.1 chr4 - 2749 7 full-splice_match ELF2 ENST00000358635.7 3036 7 260 27 no_subtype FALSE canonical NA NA 104 None 6 5 0 FALSE 0 0 NA C coding 533 1599 47 1645 PB.8951.1 chr17 - 1737 2 full-splice_match RASD1 ENST00000225688.3 1746 2 -2 11 no_subtype FALSE canonical NA NA 500 None 4 14 0 FALSE 0 0 NA A coding 276 828 230 1057 PB.11126.1 chrX + 2633 1 genic_intron novelGene_1050 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1736.1 chr2 + 1558 7 incomplete-splice_match ZC3H15 ENST00000337859.10 2138 10 573 7 internal_fragment FALSE canonical NA NA 744 None 2 3 0 FALSE 0 0 NA A coding 277 831 102 932 PB.9490.1 chr18 - 2715 16 novel_not_in_catalog MPPE1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 147 None 2 25 5 TRUE 0 0 NA A coding 397 1191 569 1759 PB.10036.1 chr19 + 2616 3 full-splice_match ZNF576 ENST00000336564.4 2566 3 -22 -28 no_subtype FALSE canonical NA NA 261 None 2 9 0 FALSE 0 0 NA A coding 170 510 177 686 PB.6703.11 chr11 - 6062 1 antisense novelGene_SORL1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 52 0 FALSE 0 0 NA B coding 85 255 58 312 PB.5451.1 chr9 - 2935 4 genic_intron novelGene_1006 novel NA NA NA NA no_subtype TRUE canonical NA NA 828 None 4 11 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.7915.2 chr14 + 2934 14 novel_in_catalog EVL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2402 None 18 11 0 FALSE 0 0 NA C coding 386 1158 89 1246 PB.1623.2 chr2 - 2836 2 genic_intron novelGene_1214 novel NA NA NA NA no_subtype FALSE canonical NA NA 415 None 2 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7022.2 chr12 - 3212 7 full-splice_match DNAJC14 ENST00000317269.7 3330 7 88 30 no_subtype FALSE canonical NA NA 60 None 56 9 0 FALSE 0 0 NA A coding 702 2106 117 2222 PB.6061.1 chr10 + 4524 29 novel_not_in_catalog WDR11 novel NA NA NA NA no_subtype TRUE canonical NA NA 3562 None 7 5 1 TRUE 0 0 NA A coding 1228 3684 32 3715 PB.10540.1 chr21 - 1613 13 full-splice_match CRYZL1 ENST00000381554.7 1617 13 -3 7 no_subtype FALSE canonical NA NA 83 None 5 6 0 FALSE 0 0 NA C coding 349 1047 90 1136 PB.10540.2 chr21 - 3494 1 novel_in_catalog CRYZL1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4639.1 chr7 - 2489 1 novel_in_catalog ZNF800 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B coding 32 96 227 322 PB.2795.1 chr4 - 5883 2 genic_intron novelGene_375 novel NA NA NA NA no_subtype TRUE canonical NA NA 3601 None 2 33 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9994.6 chr19 + 2785 12 novel_not_in_catalog PSMC4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2761 None 5 21 2 TRUE 0 0 NA C coding 418 1254 34 1287 PB.8959.9 chr17 - 2644 19 novel_not_in_catalog FLII novel NA NA NA NA no_subtype FALSE non_canonical NA NA 97 None 2 10 0 TRUE 0 0 NA C coding 771 2313 35 2347 PB.9757.1 chr19 - 1740 7 full-splice_match ICAM3 ENST00000160262.9 1934 7 188 6 no_subtype TRUE canonical NA NA 97 None 185 1 0 FALSE 0 0 NA A coding 547 1641 22 1662 PB.11086.1 chrX + 2009 5 full-splice_match ARMCX3 ENST00000341189.8 3730 5 348 1373 no_subtype FALSE canonical NA NA 372 None 5 9 0 FALSE 0 0 NA C coding 342 1026 630 1655 PB.291.1 chr1 - 2269 9 novel_not_in_catalog PPT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 128 None 9 15 1 FALSE 0 0 NA B coding 305 915 5 919 PB.8959.5 chr17 - 4119 30 full-splice_match FLII ENST00000327031.8 4338 30 211 8 no_subtype TRUE canonical NA NA 78 None 154 4 0 FALSE 0 0 NA C coding 1269 3807 16 3822 PB.9994.4 chr19 + 1432 11 novel_not_in_catalog PSMC4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1189 None 2 2 1 TRUE 0 0 NA C coding 345 1035 39 1073 PB.3505.1 chr5 + 4134 5 full-splice_match FAM53C ENST00000239906.9 4377 5 235 8 no_subtype FALSE canonical NA NA 1114 None 34 5 0 FALSE 0 0 NA A coding 392 1176 194 1369 PB.7601.1 chr14 - 1691 1 full-splice_match LINC00641 ENST00000555379.1 5425 1 3537 197 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10600.2 chr21 - 1511 6 full-splice_match UBE2G2 ENST00000345496.6 3566 6 193 1862 no_subtype FALSE canonical NA NA 121 None 63 11 0 FALSE 0 0 NA C coding 165 495 79 573 PB.10600.1 chr21 - 2603 7 novel_not_in_catalog UBE2G2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 124 None 12 19 0 TRUE 0 0 NA C coding 165 495 82 576 PB.7108.4 chr12 + 2094 10 novel_not_in_catalog CPSF6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1667 None 9 0 0 FALSE 0 0 NA B coding 552 1656 6 1661 PB.6527.1 chr11 + 3427 12 full-splice_match POLD3 ENST00000263681.6 3821 12 68 326 no_subtype FALSE canonical NA NA 1259 None 15 14 0 FALSE 0 0 NA C coding 466 1398 62 1459 PB.7108.3 chr12 + 3712 11 novel_not_in_catalog CPSF6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1706 None 2 12 0 TRUE 0 0 NA B coding 551 1653 48 1700 PB.6527.3 chr11 + 1606 1 novel_in_catalog POLD3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10493.1 chr20 + 3595 7 novel_not_in_catalog PCMTD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1930 None 28 19 1 TRUE 0 0 NA B coding 361 1083 96 1178 PB.7103.2 chr12 + 2676 1 genic_intron novelGene_646 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3930.1 chr6 - 794 4 novel_not_in_catalog MEA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 27 None 2 2 0 FALSE 0 0 NA A coding 162 486 69 554 PB.92.1 chr1 - 2042 1 incomplete-splice_match RCC2 ENST00000375436.8 4087 13 2044 2 no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.92.2 chr1 - 2834 5 incomplete-splice_match RCC2 ENST00000375436.8 4087 13 1249 4 5prime_fragment FALSE canonical NA NA 146 None 4 14 0 FALSE 0 0 NA B coding 152 456 50 505 PB.10093.2 chr19 - 631 7 full-splice_match RPL18 ENST00000549920.5 1004 7 360 13 no_subtype FALSE canonical NA NA 36 None 7 0 0 FALSE 0 0 NA A coding 188 564 34 597 PB.11086.2 chrX + 2546 4 novel_in_catalog ARMCX3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 883 None 3 3 0 FALSE 0 0 NA C coding 342 1026 1141 2166 PB.10915.1 chrX - 3025 19 novel_not_in_catalog RPGR novel NA NA NA NA no_subtype FALSE canonical NA NA 170 None 2 2 0 FALSE 0 0 NA A coding 811 2433 143 2575 PB.5147.1 chr8 + 1123 4 full-splice_match LY6E ENST00000429120.6 1173 4 46 4 no_subtype FALSE canonical NA NA 282 None 42 5 1 FALSE 0 0 NA C coding 131 393 111 503 PB.9201.1 chr17 + 3133 9 novel_not_in_catalog PNPO novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1856 None 48 12 1 TRUE 0 0 NA A coding 230 690 67 756 PB.9994.1 chr19 + 1407 11 full-splice_match PSMC4 ENST00000157812.6 1591 11 177 7 no_subtype FALSE canonical NA NA 1164 None 109 1 1 FALSE 0 0 NA C coding 418 1254 22 1275 PB.10012.1 chr19 - 1536 2 incomplete-splice_match B3GNT8 ENST00000321702.2 1874 3 335 3 5prime_fragment FALSE canonical NA NA 87 None 26 4 0 FALSE 0 0 NA A coding 397 1191 120 1310 PB.10012.3 chr19 - 1711 6 full-splice_match ATP5SL ENST00000221943.13 1692 6 -21 2 no_subtype FALSE canonical NA NA 45 None 31 6 0 FALSE 0 0 NA A coding 257 771 28 798 PB.3262.2 chr5 - 4406 1 incomplete-splice_match IL6ST ENST00000381287.8 8667 14 2732 1530 no_subtype FALSE canonical NA NA NA None 13 45 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8948.1 chr17 + 3747 23 novel_not_in_catalog MPRIP novel NA NA NA NA no_subtype TRUE canonical NA NA 3018 None 2 8 0 TRUE 0 0 NA A coding 926 2778 208 2985 PB.2309.1 chr3 + 1589 1 full-splice_match RP11-550F7.1 ENST00000476047.1 1411 1 539 -717 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A coding 158 474 276 749 PB.10468.1 chr20 - 3162 2 genic ATP5E novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3041 None 5 27 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.400.1 chr1 - 3234 16 novel_not_in_catalog CYP2J2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 237 None 3 9 3 TRUE 0 0 NA A coding 498 1494 40 1533 PB.3010.1 chr4 + 2852 5 incomplete-splice_match ANK2 ENST00000505342.5 5356 10 2501 3 internal_fragment FALSE canonical NA NA 571 None 2 11 0 FALSE 0 0 NA A coding 145 435 149 583 PB.172.1 chr1 + 2704 3 incomplete-splice_match ARID1A ENST00000430799.7 6521 20 3796 21 internal_fragment FALSE canonical NA NA 570 None 13 3 0 FALSE 0 0 NA B coding 754 2262 40 2301 PB.172.2 chr1 + 6218 20 novel_not_in_catalog ARID1A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4082 None 4 6 1 FALSE 0 0 NA B coding 805 2415 3399 5813 PB.172.3 chr1 + 2829 1 genic_intron novelGene_261 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4947.5 chr8 - 2781 14 novel_not_in_catalog ASPH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 243 None 2 10 1 FALSE 0 0 NA B coding 244 732 315 1046 PB.4947.4 chr8 - 2770 14 novel_not_in_catalog ASPH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 243 None 2 18 2 FALSE 0 0 NA B coding 240 720 315 1034 PB.7508.1 chr13 - 1707 14 full-splice_match VPS36 ENST00000378060.8 4417 14 -12 2722 no_subtype FALSE canonical NA NA 136 None 33 4 1 FALSE 0 0 NA A coding 386 1158 41 1198 PB.6168.1 chr11 + 1850 2 genic RP11-304C12.5 novel NA NA NA NA no_subtype FALSE canonical NA NA 567 None 3 10 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.5732.1 chr10 + 1514 3 genic_intron novelGene_315 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 571 None 2 15 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.4947.3 chr8 - 2866 15 novel_not_in_catalog ASPH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 305 None 45 16 1 FALSE 0 0 NA B coding 255 765 377 1141 PB.4947.2 chr8 - 2672 13 novel_not_in_catalog ASPH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 260 None 4 11 1 FALSE 0 0 NA B coding 201 603 332 934 PB.10307.1 chr20 + 3856 21 novel_not_in_catalog PYGB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2655 None 399 9 1 TRUE 0 0 NA B coding 752 2256 165 2420 PB.5807.4 chr10 + 1426 10 full-splice_match HNRNPH3 ENST00000265866.11 2339 10 -7 920 no_subtype FALSE canonical NA NA 1136 None 7 2 0 FALSE 0 0 NA C coding 346 1038 173 1210 PB.5283.1 chr9 - 1535 8 novel_in_catalog TPM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 211 None 2 2 0 FALSE 0 0 NA C coding 303 909 98 1006 PB.5283.2 chr9 - 1014 9 full-splice_match TPM2 ENST00000378292.7 2147 9 1106 27 no_subtype FALSE canonical NA NA 211 None 5 1 0 FALSE 0 0 NA C coding 284 852 98 949 PB.3623.4 chr5 - 3306 11 full-splice_match RNF145 ENST00000519865.5 3478 11 163 9 no_subtype FALSE canonical NA NA 23 None 2 6 0 FALSE 0 0 NA C coding 663 1989 63 2051 PB.9747.1 chr19 + 1870 8 full-splice_match C19orf66 ENST00000253110.15 2117 8 243 4 no_subtype FALSE canonical NA NA 698 None 12 3 0 FALSE 0 0 NA C coding 291 873 56 928 PB.9747.2 chr19 + 2048 7 full-splice_match C19orf66 ENST00000585919.5 2079 7 20 11 no_subtype FALSE canonical NA NA 876 None 4 3 0 FALSE 0 0 NA C coding 163 489 112 600 PB.9747.3 chr19 + 2477 6 novel_in_catalog C19orf66 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 490 None 2 14 0 FALSE 0 0 NA C coding 163 489 107 595 PB.4625.2 chr7 + 2991 4 novel_not_in_catalog CAV1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1647 None 2 11 1 TRUE 0 0 NA B coding 147 441 691 1131 PB.4625.3 chr7 + 2531 3 novel_not_in_catalog CAV1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1187 None 4 9 1 TRUE 0 0 NA B coding 147 441 231 671 PB.3070.1 chr4 + 3012 7 full-splice_match SMAD1 ENST00000515385.1 2085 7 195 -1122 no_subtype FALSE canonical NA NA 1601 None 2 7 0 FALSE 0 0 NA A coding 465 1395 348 1742 PB.4625.1 chr7 + 2436 4 novel_not_in_catalog CAV1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1099 None 8 10 1 TRUE 0 0 NA B coding 178 534 50 583 PB.312.1 chr1 + 3863 23 full-splice_match TIE1 ENST00000372476.7 3882 23 16 3 no_subtype FALSE canonical NA NA 3408 None 29 2 1 FALSE 0 0 NA A coding 1138 3414 64 3477 PB.5433.1 chr9 + 2867 1 genic_intron novelGene_984 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6864.1 chr12 - 3683 1 genic_intron novelGene_226 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9668.4 chr19 + 1479 9 novel_not_in_catalog NFIC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1292 None 2 9 2 TRUE 0 0 NA C coding 429 1287 116 1402 PB.7615.3 chr14 - 2537 16 novel_not_in_catalog RBM23 novel NA NA NA NA no_subtype FALSE canonical NA NA 178 None 10 12 2 TRUE 0 0 NA B coding 439 1317 189 1505 PB.8654.2 chr16 - 3981 13 novel_not_in_catalog SLC38A7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 250 None 2 13 3 TRUE 0 0 NA A coding 462 1386 366 1751 PB.9668.1 chr19 + 1543 10 full-splice_match NFIC ENST00000395111.7 1755 10 5 207 no_subtype FALSE canonical NA NA 1359 None 7 0 0 FALSE 0 0 NA C coding 430 1290 32 1321 PB.7615.4 chr14 - 2474 15 novel_not_in_catalog RBM23 novel NA NA NA NA no_subtype FALSE canonical NA NA 163 None 2 12 2 TRUE 0 0 NA B coding 423 1269 174 1442 PB.9668.3 chr19 + 1596 10 full-splice_match NFIC ENST00000590282.5 1558 10 0 -38 no_subtype FALSE canonical NA NA 1409 None 10 0 0 FALSE 0 0 NA C coding 439 1317 55 1371 PB.9334.1 chr17 + 2743 2 full-splice_match KCNJ2 ENST00000243457.3 5392 2 4 2645 no_subtype FALSE canonical NA NA 163 None 2 3 0 FALSE 0 0 NA A coding 427 1281 380 1660 PB.1541.1 chr2 + 2695 2 novel_not_in_catalog BCL2L11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2306 None 3 19 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.7959.270 chr14 - 1938 7 fusion IGHM,IGHV4-39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 83 None 2 14 1 TRUE 0 0 NA B coding 375 1125 693 1817 PB.6493.1 chr11 + 4360 24 full-splice_match PPP6R3 ENST00000393800.6 5093 24 -2 735 no_subtype FALSE canonical NA NA 2826 None 2 8 1 FALSE 0 0 NA A coding 873 2619 257 2875 PB.2462.3 chr3 - 1511 11 full-splice_match ISY1 ENST00000393295.7 3842 11 187 2144 no_subtype FALSE canonical NA NA 134 None 8 4 0 FALSE 0 0 NA C coding 285 855 132 986 PB.7910.1 chr14 - 3004 1 genic_intron novelGene_905 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 17 0 FALSE 0 0 NA A coding 104 312 570 881 PB.6198.1 chr11 - 2803 5 novel_in_catalog SBF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 859 None 2 12 1 FALSE 0 0 NA A coding 195 585 925 1509 PB.1167.1 chr1 + 3019 4 novel_not_in_catalog ZNF672 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 562 None 14 14 1 TRUE 0 0 NA A coding 452 1356 786 2141 PB.1752.1 chr2 + 4449 8 novel_not_in_catalog MFSD6 novel NA NA NA NA no_subtype TRUE canonical NA NA 2372 None 3 15 0 TRUE 0 0 NA A coding 791 2373 201 2573 PB.1331.1 chr2 + 2150 2 antisense novelGene_NRXN1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1201 None 3 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8312.1 chr15 - 2907 3 full-splice_match RGMA ENST00000542321.6 3038 3 -20 151 no_subtype FALSE canonical NA NA 253 None 30 15 0 FALSE 0 0 NA A coding 432 1296 178 1473 PB.3078.6 chr4 - 1463 1 genic_intron novelGene_1233 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3078.5 chr4 - 2781 3 genic_intron novelGene_1231 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 620 None 6 19 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.11093.1 chrX - 1117 3 full-splice_match TCEAL8 ENST00000372685.7 1222 3 49 56 no_subtype FALSE canonical NA NA 77 None 4 2 0 FALSE 0 0 NA A coding 117 351 189 539 PB.3078.3 chr4 - 3076 1 genic_intron novelGene_1229 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A coding 103 309 728 1036 PB.3078.2 chr4 - 5859 9 full-splice_match NR3C2 ENST00000358102.7 5893 9 29 5 no_subtype FALSE canonical NA NA 332 None 4 21 0 FALSE 0 0 NA A coding 970 2910 377 3286 PB.5137.6 chr8 - 2940 8 novel_not_in_catalog ST3GAL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 190 None 2 9 0 FALSE 0 0 NA C coding 340 1020 1058 2077 PB.716.3 chr1 + 2923 23 novel_not_in_catalog ADAM15 novel NA NA NA NA no_subtype FALSE canonical NA NA 2608 None 11 4 0 FALSE 0 0 NA B coding 542 1626 1023 2648 PB.2462.2 chr3 - 1731 12 novel_not_in_catalog ISY1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 133 None 2 7 0 TRUE 0 0 NA C coding 285 855 131 985 PB.4314.1 chr7 + 3202 5 incomplete-splice_match HDAC9 ENST00000406072.5 4102 10 893 7 internal_fragment FALSE canonical NA NA 578 None 2 3 0 FALSE 0 0 NA A coding 288 864 27 890 PB.2764.1 chr4 - 3037 6 novel_not_in_catalog LCORL novel NA NA NA NA no_subtype TRUE canonical NA NA 143 None 2 21 0 TRUE 0 0 NA A coding 262 786 11 796 PB.3947.1 chr6 - 2002 4 full-splice_match SLC35B2 ENST00000393812.3 2043 4 39 2 no_subtype FALSE canonical NA NA 116 None 9 12 0 FALSE 0 0 NA C coding 432 1296 106 1401 PB.168.1 chr1 + 1868 6 full-splice_match HMGN2 ENST00000361427.5 1191 6 -12 -665 no_subtype FALSE canonical NA NA 343 None 38 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3006.1 chr4 - 1608 2 full-splice_match TIFA ENST00000361717.3 4157 2 -1 2550 no_subtype FALSE canonical NA NA 265 None 11 9 0 FALSE 0 0 NA A coding 184 552 284 835 PB.10307.2 chr20 + 2754 21 novel_not_in_catalog PYGB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2683 None 2 3 0 TRUE 0 0 NA B coding 843 2529 109 2637 PB.168.2 chr1 + 1552 5 full-splice_match HMGN2 ENST00000460563.5 1045 5 29 -536 no_subtype FALSE canonical NA NA 696 None 4 8 0 FALSE 0 0 NA C coding 136 408 359 766 PB.3947.2 chr6 - 1791 3 full-splice_match SLC35B2 ENST00000495706.1 1859 3 54 14 no_subtype FALSE canonical NA NA 101 None 2 11 0 FALSE 0 0 NA C coding 327 981 212 1192 PB.6991.9 chr12 - 2777 16 novel_not_in_catalog ITGB7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 50 None 3 4 1 TRUE 0 0 NA C coding 798 2394 152 2545 PB.6991.6 chr12 - 2786 16 novel_not_in_catalog ITGB7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 50 None 7 5 1 TRUE 0 0 NA C coding 793 2379 175 2553 PB.6991.7 chr12 - 2776 17 novel_not_in_catalog ITGB7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 50 None 36 3 1 TRUE 0 0 NA C coding 798 2394 153 2546 PB.6991.4 chr12 - 2805 16 full-splice_match ITGB7 ENST00000267082.9 2867 16 52 10 no_subtype FALSE canonical NA NA 54 None 48 2 0 FALSE 0 0 NA C coding 798 2394 181 2574 PB.6991.5 chr12 - 3766 2 novel_not_in_catalog ITGB7 novel NA NA NA NA no_subtype FALSE canonical NA NA 524 None 2 23 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.6991.2 chr12 - 2984 14 novel_in_catalog ITGB7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 33 None 2 5 0 FALSE 0 0 NA C coding 359 1077 37 1113 PB.293.1 chr1 + 2917 11 novel_not_in_catalog ZMPSTE24 novel NA NA NA NA no_subtype FALSE canonical NA NA 1193 None 110 11 1 TRUE 0 0 NA B coding 273 819 1 819 PB.293.2 chr1 + 2821 11 novel_not_in_catalog ZMPSTE24 novel NA NA NA NA no_subtype FALSE canonical NA NA 1260 None 2 10 1 TRUE 0 0 NA B coding 263 789 35 823 PB.293.3 chr1 + 1480 1 incomplete-splice_match ZMPSTE24 ENST00000372759.3 3108 10 1621 8 no_subtype FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1082.6 chr1 - 3633 23 novel_in_catalog TMEM63A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 32 None 2 7 0 FALSE 0 0 NA C coding 618 1854 47 1900 PB.4965.6 chr8 - 3859 2 novel_in_catalog NCOA2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 121 None 2 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5974.8 chr10 + 4294 16 novel_in_catalog SEMA4G novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3171 None 4 5 0 FALSE 0 0 NA B coding 838 2514 429 2942 PB.2373.1 chr3 - 1423 12 full-splice_match ATG3 ENST00000283290.9 1570 12 84 63 no_subtype FALSE canonical NA NA 423 None 99 2 0 FALSE 0 0 NA A coding 314 942 352 1293 PB.9126.1 chr17 - 1764 14 full-splice_match DNAJC7 ENST00000457167.8 2022 14 212 46 no_subtype FALSE canonical NA NA 102 None 20 0 0 FALSE 0 0 NA C coding 494 1482 26 1507 PB.7749.4 chr14 + 2533 5 novel_in_catalog HIF1A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1209 None 2 11 0 FALSE 0 0 NA C coding 300 900 459 1358 PB.5974.6 chr10 + 3939 16 novel_in_catalog SEMA4G novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2815 None 4 4 1 FALSE 0 0 NA B coding 838 2514 73 2586 PB.9126.2 chr17 - 3103 8 novel_in_catalog DNAJC7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 86 None 2 14 0 FALSE 0 0 NA C coding 309 927 10 936 PB.7661.3 chr14 + 2498 2 genic_intron novelGene_343 novel NA NA NA NA no_subtype TRUE canonical NA NA 1494 None 2 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7661.2 chr14 + 2916 5 full-splice_match FAM177A1 ENST00000280987.8 2927 5 3 8 no_subtype FALSE canonical NA NA 562 None 13 23 0 FALSE 0 0 NA C coding 236 708 59 766 PB.7661.1 chr14 + 2943 6 full-splice_match FAM177A1 ENST00000382406.7 858 6 -101 -1984 no_subtype FALSE canonical NA NA 593 None 7 27 1 FALSE 0 0 NA C coding 213 639 159 797 PB.5974.3 chr10 + 4312 16 novel_in_catalog SEMA4G novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3186 None 13 4 0 FALSE 0 0 NA B coding 843 2529 429 2957 PB.4102.1 chr6 + 1690 2 full-splice_match PLN ENST00000357525.5 2001 2 0 311 no_subtype FALSE canonical NA NA 95 None 10 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4102.2 chr6 + 1597 1 novel_in_catalog PLN novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3948.2 chr6 - 1801 6 full-splice_match NFKBIE ENST00000619360.4 2327 6 -6 532 no_subtype FALSE canonical NA NA 559 None 8 7 0 FALSE 0 0 NA A coding 361 1083 195 1277 PB.10489.2 chr20 + 2725 7 novel_not_in_catalog TPD52L2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1039 None 2 21 0 FALSE 0 0 NA C coding 349 1047 86 1132 PB.7747.3 chr14 + 3244 1 genic_intron novelGene_585 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 29 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1710.6 chr2 - 4623 9 novel_not_in_catalog WIPF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 116 None 2 23 0 TRUE 0 0 NA C coding 503 1509 155 1663 PB.2811.1 chr4 - 2061 14 novel_not_in_catalog UGDH novel NA NA NA NA no_subtype TRUE canonical NA NA 158 None 83 3 1 TRUE 0 0 NA A coding 494 1482 166 1647 PB.6856.1 chr12 + 2979 5 full-splice_match GOLT1B ENST00000229314.9 3227 5 -3 251 no_subtype FALSE canonical NA NA 490 None 71 24 0 FALSE 0 0 NA A coding 138 414 113 526 PB.8012.2 chr15 + 2858 3 novel_not_in_catalog OIP5-AS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 725 None 10 27 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.8012.3 chr15 + 2803 2 novel_not_in_catalog OIP5-AS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 660 None 127 25 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.1621.1 chr2 + 2659 1 novel_in_catalog ARHGAP15 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 10 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1082.3 chr1 - 2809 24 novel_in_catalog TMEM63A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 69 None 23 6 1 FALSE 0 0 NA C coding 807 2421 84 2504 PB.3867.3 chr6 + 2642 14 full-splice_match ZNF76 ENST00000373953.7 2716 14 71 3 no_subtype FALSE canonical NA NA 1803 None 20 6 0 FALSE 0 0 NA C coding 570 1710 196 1905 PB.4381.14 chr7 - 1360 9 novel_not_in_catalog TRGC1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 74 None 2 18 4 TRUE 0 0 NA A coding 126 378 35 412 PB.4381.17 chr7 - 1550 6 fusion TRGC1,TRGV9 novel NA NA NA NA no_subtype FALSE canonical NA NA 246 None 6 2 1 TRUE 0 0 NA B coding 141 423 200 622 PB.743.1 chr1 + 3434 5 novel_not_in_catalog SLC25A44 novel NA NA NA NA no_subtype FALSE canonical NA NA 2962 None 40 20 1 TRUE 0 0 NA A coding 314 942 141 1082 PB.4381.11 chr7 - 1655 8 fusion TRGC1,TRGC2,TRGV9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 245 None 3 1 0 TRUE 0 0 NA B coding 340 1020 200 1219 PB.4381.10 chr7 - 1607 8 fusion TRGC1,TRGV7,TRGC2,TRGV8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 196 None 22 4 0 TRUE 0 0 NA B coding 143 429 743 1171 PB.3867.4 chr6 + 2967 6 novel_not_in_catalog ZNF76 novel NA NA NA NA no_subtype FALSE canonical NA NA 2791 None 2 7 2 TRUE 0 0 NA C coding 219 657 1566 2222 PB.2569.2 chr3 - 3551 16 novel_not_in_catalog MECOM novel NA NA NA NA no_subtype FALSE canonical NA NA 69 None 2 0 0 FALSE 0 0 NA B coding 1123 3369 43 3411 PB.5487.3 chr9 - 2666 6 novel_not_in_catalog PDCL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 105 None 2 20 1 TRUE 0 0 NA B coding 283 849 111 959 PB.8692.1 chr16 - 1448 2 antisense novelGene_NFATC3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1360 None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4346.1 chr7 - 1681 13 full-splice_match CPVL ENST00000265394.9 2091 13 1 409 no_subtype FALSE canonical NA NA 108 None 27 2 0 FALSE 0 0 NA C coding 472 1416 131 1546 PB.7146.1 chr12 - 2779 1 genic_intron novelGene_797 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.252 chr14 - 2105 10 fusion IGHV4-4,IGHM novel NA NA NA NA no_subtype TRUE non_canonical NA NA 91 None 2 6 1 TRUE 0 0 NA B coding 396 1188 660 1847 PB.2871.1 chr4 - 2666 1 novel_in_catalog COX18 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 10 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1440.1 chr2 + 449 3 full-splice_match TMSB10 ENST00000233143.5 496 3 34 13 no_subtype FALSE canonical NA NA 175 None 2 1 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3268.1 chr5 + 3605 12 incomplete-splice_match MAP3K1 ENST00000399503.3 7011 20 1617 1789 internal_fragment TRUE canonical NA NA 2772 None 6 5 0 FALSE 0 0 NA A coding 947 2841 79 2919 PB.7959.253 chr14 - 2050 11 fusion IGHM,IGHV3-7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 49 None 2 12 2 TRUE 0 0 NA B coding 396 1188 606 1793 PB.3455.16 chr5 + 1536 1 incomplete-splice_match CDC42SE2 ENST00000395246.5 3485 5 1932 18 no_subtype FALSE canonical NA NA NA None 7 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4725.5 chr7 + 2001 9 novel_in_catalog ZYX novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1471 None 2 2 0 FALSE 0 0 NA C coding 415 1245 329 1573 PB.4725.3 chr7 + 2220 10 full-splice_match ZYX ENST00000322764.9 2493 10 268 5 no_subtype FALSE canonical NA NA 1691 None 42 3 1 FALSE 0 0 NA C coding 572 1716 78 1793 PB.3455.13 chr5 + 2805 4 novel_not_in_catalog CDC42SE2 novel NA NA NA NA no_subtype FALSE canonical NA NA 785 None 2 26 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.716.6 chr1 + 2957 23 novel_in_catalog ADAM15 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2643 None 2 7 1 FALSE 0 0 NA B coding 547 1641 1043 2683 PB.6730.1 chr11 - 1484 1 full-splice_match RP11-676M6.1 ENST00000526843.2 742 1 -147 -595 no_subtype FALSE canonical NA NA NA None 48 0 0 FALSE 0 0 NA A coding 189 567 147 713 PB.4050.1 chr6 + 1477 1 novel_in_catalog PRDM1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6838.1 chr12 + 1792 12 full-splice_match DDX47 ENST00000358007.7 1817 12 17 8 no_subtype FALSE canonical NA NA 1241 None 35 2 0 FALSE 0 0 NA C coding 455 1365 6 1370 PB.6838.2 chr12 + 2906 11 novel_not_in_catalog DDX47 novel NA NA NA NA no_subtype FALSE canonical NA NA 2363 None 2 13 0 FALSE 0 0 NA C coding 252 756 15 770 PB.6838.3 chr12 + 2813 10 novel_in_catalog DDX47 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2261 None 3 15 0 FALSE 0 0 NA C coding 222 666 6 671 PB.8289.1 chr15 + 3723 15 full-splice_match SEMA4B ENST00000332496.10 3781 15 19 39 no_subtype FALSE canonical NA NA 1995 None 5 7 0 FALSE 0 0 NA C coding 837 2511 222 2732 PB.8289.2 chr15 + 3748 14 full-splice_match SEMA4B ENST00000411539.6 3807 14 15 44 no_subtype FALSE canonical NA NA 2019 None 3 7 0 FALSE 0 0 NA C coding 832 2496 261 2756 PB.457.1 chr1 - 1388 3 full-splice_match BCL10 ENST00000370580.5 2819 3 501 930 no_subtype FALSE canonical NA NA 294 None 8 9 0 FALSE 0 0 NA A coding 233 699 238 936 PB.6991.18 chr12 - 2659 15 novel_in_catalog ITGB7 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 50 None 2 1 0 FALSE 0 0 NA C coding 766 2298 131 2428 PB.6991.19 chr12 - 2751 17 novel_not_in_catalog ITGB7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 50 None 2 3 2 TRUE 0 0 NA C coding 758 2274 247 2520 PB.10487.1 chr20 + 1840 7 full-splice_match ZGPAT ENST00000355969.10 1871 7 29 2 no_subtype FALSE canonical NA NA 1480 None 41 2 0 FALSE 0 0 NA C coding 511 1533 84 1616 PB.3960.1 chr6 - 2636 13 full-splice_match MUT ENST00000274813.3 3749 13 -72 1185 no_subtype FALSE canonical NA NA 161 None 39 0 0 FALSE 0 0 NA A coding 750 2250 201 2450 PB.8987.1 chr17 - 3623 1 antisense novelGene_MAP2K3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 29 0 FALSE 0 0 NA A coding 119 357 2844 3200 PB.6991.12 chr12 - 2763 16 novel_not_in_catalog ITGB7 novel NA NA NA NA no_subtype FALSE canonical NA NA 83 None 8 3 1 FALSE 0 0 NA C coding 798 2394 139 2532 PB.6991.13 chr12 - 3069 16 novel_not_in_catalog ITGB7 novel NA NA NA NA no_subtype FALSE canonical NA NA 48 None 2 3 0 FALSE 0 0 NA C coding 798 2394 444 2837 PB.2639.1 chr3 - 1285 1 full-splice_match RPL4P4 ENST00000422486.1 1284 1 79 -80 no_subtype FALSE canonical NA NA NA None 2 0 0 FALSE 0 0 NA A coding 230 690 138 827 PB.6991.16 chr12 - 2693 15 novel_in_catalog ITGB7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 65 None 31 1 0 FALSE 0 0 NA C coding 798 2394 69 2462 PB.1325.1 chr2 + 1484 9 full-splice_match EPCAM ENST00000263735.8 1724 9 223 17 no_subtype FALSE canonical NA NA 1038 None 569 2 0 FALSE 0 0 NA C coding 314 942 136 1077 PB.716.7 chr1 + 2919 23 novel_not_in_catalog ADAM15 novel NA NA NA NA no_subtype FALSE canonical NA NA 2605 None 8 3 0 FALSE 0 0 NA B coding 547 1641 1005 2645 PB.2496.3 chr3 - 2784 20 novel_not_in_catalog COPB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 31 None 2 1 1 TRUE 0 0 NA C coding 825 2475 38 2512 PB.10520.2 chr21 + 2898 1 incomplete-splice_match BACH1 ENST00000286800.7 5669 5 2767 5 no_subtype FALSE canonical NA NA NA None 2 31 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10832.3 chr22 - 3741 13 full-splice_match CERK ENST00000216264.12 4450 13 34 675 no_subtype FALSE canonical NA NA 221 None 2 10 0 FALSE 0 0 NA C coding 537 1611 80 1690 PB.10520.1 chr21 + 5635 5 full-splice_match BACH1 ENST00000286800.7 5669 5 26 8 no_subtype FALSE canonical NA NA 1893 None 51 21 0 FALSE 0 0 NA C coding 736 2208 118 2325 PB.55.2 chr1 - 2917 25 novel_not_in_catalog EXOSC10 novel NA NA NA NA no_subtype FALSE canonical NA NA 135 None 5 6 0 TRUE 0 0 NA B coding 691 2073 25 2097 PB.55.1 chr1 - 2770 26 novel_not_in_catalog EXOSC10 novel NA NA NA NA no_subtype FALSE canonical NA NA 136 None 105 4 0 TRUE 0 0 NA B coding 885 2655 26 2680 PB.3424.3 chr5 - 2916 2 genic_intron novelGene_1026 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1640 None 15 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1710.9 chr2 - 3413 8 full-splice_match WIPF1 ENST00000392547.6 4587 8 -26 1200 no_subtype FALSE canonical NA NA 88 None 5 8 0 FALSE 0 0 NA C coding 503 1509 127 1635 PB.6676.3 chr11 + 3488 17 novel_not_in_catalog PHLDB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2145 None 4 4 3 FALSE 0 0 NA B coding 692 2076 2 2077 PB.7353.1 chr12 - 1437 4 full-splice_match RILPL2 ENST00000280571.9 6141 4 -4 4708 no_subtype FALSE canonical NA NA 640 None 3 14 1 FALSE 0 0 NA A coding 211 633 302 934 PB.2595.3 chr3 + 4205 26 novel_not_in_catalog ECT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2886 None 2 11 3 FALSE 0 0 NA C coding 547 1641 1333 2973 PB.9640.4 chr19 + 1379 1 incomplete-splice_match MIDN ENST00000300952.6 3790 8 2061 351 no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3877.1 chr6 + 1843 12 full-splice_match MAPK13 ENST00000211287.8 2052 12 197 12 no_subtype FALSE canonical NA NA 1083 None 18 2 0 FALSE 0 0 NA A coding 365 1095 66 1160 PB.7162.1 chr12 - 1697 1 full-splice_match RP11-887P2.3 ENST00000548270.1 765 1 -17 -915 no_subtype FALSE canonical NA NA NA None 81 7 0 FALSE 0 0 NA A coding 254 762 18 779 PB.9302.9 chr17 - 3606 19 novel_not_in_catalog PECAM1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 154 None 3 5 3 TRUE 0 0 NA B coding 728 2184 340 2523 PB.4717.1 chr7 - 3415 2 novel_not_in_catalog BRAF novel NA NA NA NA no_subtype FALSE canonical NA NA 2585 None 2 23 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.2095.4 chr3 + 2747 6 genic_intron novelGene_366 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1040 None 4 23 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.1649.7 chr2 - 2738 25 novel_not_in_catalog PRPF40A novel NA NA NA NA no_subtype FALSE canonical NA NA 31 None 2 3 0 FALSE 0 0 NA C coding 840 2520 218 2737 PB.2664.3 chr3 + 3119 1 incomplete-splice_match LPP ENST00000617246.4 18220 11 15098 4 no_subtype FALSE canonical NA NA NA None 4 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1649.5 chr2 - 2910 27 novel_not_in_catalog PRPF40A novel NA NA NA NA no_subtype FALSE canonical NA NA 23 None 2 2 0 FALSE 0 0 NA C coding 915 2745 61 2805 PB.1649.4 chr2 - 2929 26 novel_not_in_catalog PRPF40A novel NA NA NA NA no_subtype TRUE canonical NA NA 106 None 5 4 0 FALSE 0 0 NA C coding 919 2757 68 2824 PB.2072.2 chr3 + 1517 1 incomplete-splice_match TGFBR2 ENST00000359013.4 4605 8 3051 38 no_subtype FALSE canonical NA NA NA None 6 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10193.1 chr19 + 3143 4 novel_not_in_catalog ZNF776 novel NA NA NA NA no_subtype FALSE canonical NA NA 377 None 2 12 1 TRUE 0 0 NA A coding 518 1554 218 1771 PB.1649.9 chr2 - 1703 16 incomplete-splice_match PRPF40A ENST00000410080.5 8048 26 520 5825 internal_fragment FALSE canonical NA NA 106 None 2 2 0 FALSE 0 0 NA C coding 545 1635 68 1702 PB.8580.1 chr16 + 2694 6 full-splice_match ARMC5 ENST00000268314.8 3612 6 916 2 no_subtype FALSE canonical NA NA 1610 None 26 2 0 FALSE 0 0 NA A coding 771 2313 106 2418 PB.10352.11 chr20 - 2955 19 novel_in_catalog RBM39 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 296 None 2 9 0 FALSE 0 0 NA C coding 247 741 854 1594 PB.2754.5 chr4 - 3350 10 novel_not_in_catalog FBXL5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 181 None 2 11 0 TRUE 0 0 NA C coding 617 1851 98 1948 PB.6746.1 chr11 + 3514 11 novel_not_in_catalog JAM3 novel NA NA NA NA no_subtype TRUE canonical NA NA 2791 None 29 17 0 TRUE 0 0 NA A coding 310 930 32 961 PB.8202.4 chr15 - 1346 12 novel_not_in_catalog UBL7 novel NA NA NA NA no_subtype FALSE canonical NA NA 29 None 4 1 1 FALSE 0 0 NA C coding 380 1140 105 1244 PB.2754.1 chr4 - 2820 11 full-splice_match FBXL5 ENST00000341285.7 3385 11 81 484 no_subtype FALSE canonical NA NA 128 None 249 1 0 FALSE 0 0 NA C coding 691 2073 45 2117 PB.2532.1 chr3 + 3789 1 incomplete-splice_match TSC22D2 ENST00000361875.7 11154 4 7347 19 no_subtype FALSE canonical NA NA NA None 4 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2754.3 chr4 - 2861 11 novel_in_catalog FBXL5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 161 None 5 4 0 FALSE 0 0 NA C coding 636 1908 243 2150 PB.2492.1 chr3 - 2635 18 full-splice_match CEP70 ENST00000484888.5 1993 18 -1 -641 no_subtype FALSE canonical NA NA 28 None 6 5 0 FALSE 0 0 NA A coding 597 1791 189 1979 PB.7882.1 chr14 - 2779 10 full-splice_match ASB2 ENST00000555019.5 2842 10 61 2 no_subtype TRUE canonical NA NA 297 None 15 6 0 FALSE 0 0 NA A coding 635 1905 371 2275 PB.10347.1 chr20 - 1388 11 novel_not_in_catalog UQCC1 novel NA NA NA NA no_subtype TRUE canonical NA NA 34 None 4 5 1 TRUE 0 0 NA A coding 299 897 11 907 PB.997.2 chr1 + 2954 4 full-splice_match MFSD4A ENST00000465651.1 588 4 0 -2366 no_subtype FALSE canonical NA NA 443 None 5 9 0 FALSE 0 0 NA C coding 97 291 55 345 PB.7429.1 chr13 + 4062 32 novel_in_catalog PDS5B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3718 None 3 5 1 FALSE 0 0 NA B coding 1320 3960 101 4060 PB.3121.5 chr4 - 2014 14 novel_not_in_catalog DDX60L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 98 None 2 8 1 TRUE 0 0 NA B coding 559 1677 337 2013 PB.5671.1 chr10 + 2312 3 incomplete-splice_match TAF3 ENST00000344293.5 4872 7 13 2547 3prime_fragment FALSE canonical NA NA 602 None 4 0 0 FALSE 0 0 NA B coding 706 2118 194 2311 PB.1303.1 chr2 - 1806 1 incomplete-splice_match ZFP36L2 ENST00000282388.3 3696 2 1876 15 no_subtype FALSE canonical NA NA NA None 31 21 0 FALSE 0 0 NA A coding 121 363 349 711 PB.10759.17 chr22 - 2737 2 novel_not_in_catalog DDX17 novel NA NA NA NA no_subtype FALSE canonical NA NA 876 None 2 28 1 TRUE 0 0 NA C coding 129 387 936 1322 PB.7903.1 chr14 - 2097 1 incomplete-splice_match BCL11B ENST00000357195.7 7559 4 5443 20 no_subtype FALSE canonical NA NA NA None 6 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5187.1 chr8 + 3083 2 intergenic novelGene_1224 novel NA NA NA NA no_subtype FALSE canonical NA NA 1584 None 2 21 1 FALSE 0 0 NA A coding 139 417 1097 1513 PB.10732.1 chr22 - 3147 9 full-splice_match FOXRED2 ENST00000216187.10 3933 9 -18 804 no_subtype TRUE canonical NA NA 129 None 2 11 0 FALSE 0 0 NA A coding 684 2052 131 2182 PB.2693.1 chr3 - 641 4 full-splice_match NCBP2 ENST00000321256.9 2169 4 77 1451 no_subtype FALSE canonical NA NA 95 None 2 0 0 FALSE 0 0 NA A coding 156 468 18 485 PB.2846.1 chr4 + 2140 2 novel_not_in_catalog PDGFRA novel NA NA NA NA no_subtype FALSE canonical NA NA 287 None 2 12 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.2048.1 chr3 + 2892 9 incomplete-splice_match KAT2B ENST00000263754.4 4833 18 1927 14 internal_fragment FALSE canonical NA NA 833 None 2 27 1 FALSE 0 0 NA A coding 320 960 65 1024 PB.41.6 chr1 - 6225 13 novel_not_in_catalog RERE novel NA NA NA NA no_subtype FALSE canonical NA NA 51 None 3 13 1 FALSE 0 0 NA B coding 986 2958 589 3546 PB.3331.1 chr5 - 1913 2 novel_not_in_catalog AC113404.1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1238 None 56 3 1 FALSE 0 0 NA A coding 184 552 147 698 PB.213.1 chr1 + 3005 3 antisense novelGene_PUM1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 209 None 2 23 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.213.2 chr1 + 1992 4 antisense novelGene_PUM1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1716 None 2 15 2 FALSE 0 0 NA B coding 176 528 467 994 PB.213.3 chr1 - 2977 1 novel_in_catalog PUM1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.831.2 chr1 - 1469 6 novel_in_catalog TMCO1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 187 None 2 2 0 FALSE 0 0 NA C coding 197 591 118 708 PB.4297.1 chr7 + 3609 2 novel_in_catalog GLCCI1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1526 None 4 17 0 FALSE 0 0 NA A coding 126 378 2788 3165 PB.3521.1 chr5 + 2913 1 genic_intron novelGene_1188 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4424.1 chr7 + 1913 14 full-splice_match CCT6A ENST00000275603.8 2719 14 207 599 no_subtype FALSE canonical NA NA 1535 None 95 3 0 FALSE 0 0 NA C coding 531 1593 13 1605 PB.303.2 chr1 - 3567 3 full-splice_match FOXJ3 ENST00000372571.5 4468 3 881 20 no_subtype FALSE canonical NA NA 192 None 2 18 0 FALSE 0 0 NA C coding 136 408 6 413 PB.5652.1 chr10 + 2590 22 full-splice_match PFKP ENST00000381125.8 2654 22 28 36 no_subtype FALSE canonical NA NA 2273 None 50 6 0 FALSE 0 0 NA A coding 784 2352 49 2400 PB.6043.1 chr10 - 3543 17 full-splice_match SHTN1 ENST00000355371.8 5361 17 392 1426 no_subtype FALSE canonical NA NA 164 None 6 6 0 FALSE 0 0 NA A coding 631 1893 107 1999 PB.4424.5 chr7 + 1775 9 novel_not_in_catalog CCT6A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1744 None 2 13 0 TRUE 0 0 NA C coding 211 633 208 840 PB.10759.10 chr22 - 5837 12 novel_not_in_catalog DDX17 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 87 None 2 30 0 TRUE 0 0 NA C coding 304 912 196 1107 PB.4424.7 chr7 + 1940 9 full-splice_match SUMF2 ENST00000434526.6 2052 9 93 19 no_subtype FALSE canonical NA NA 816 None 7 10 0 FALSE 0 0 NA A coding 272 816 83 898 PB.3677.6 chr5 - 3221 5 novel_not_in_catalog DOK3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 45 None 2 21 3 TRUE 0 0 NA B coding 118 354 248 601 PB.9458.1 chr17 - 1692 6 full-splice_match RAB40B ENST00000571995.5 3859 6 63 2104 no_subtype FALSE canonical NA NA 211 None 2 5 0 FALSE 0 0 NA A coding 278 834 70 903 PB.10759.11 chr22 - 6433 12 novel_in_catalog DDX17 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 361 None 23 28 1 FALSE 0 0 NA C coding 407 1221 312 1532 PB.520.3 chr1 - 2819 5 full-splice_match EXTL2 ENST00000370114.7 3985 5 1160 6 no_subtype FALSE canonical NA NA 206 None 2 13 1 FALSE 0 0 NA C coding 330 990 278 1267 PB.10828.1 chr22 + 2928 12 full-splice_match GTSE1 ENST00000454366.1 3112 12 181 3 no_subtype TRUE canonical NA NA 2167 None 4 9 0 FALSE 0 0 NA A coding 739 2217 32 2248 PB.1340.5 chr2 - 3171 16 novel_not_in_catalog MTIF2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 889 None 2 8 1 TRUE 0 0 NA B coding 727 2181 964 3144 PB.6340.2 chr11 + 1164 1 incomplete-splice_match FAM111A ENST00000361723.7 3592 4 2425 4 no_subtype FALSE canonical NA NA NA None 6 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9273.1 chr17 + 1798 15 novel_not_in_catalog RPS6KB1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1390 None 27 4 1 TRUE 0 0 NA A coding 523 1569 57 1625 PB.8109.1 chr15 + 4023 13 full-splice_match TCF12 ENST00000343827.7 3956 13 -67 0 no_subtype FALSE canonical NA NA 1673 None 3 5 0 FALSE 0 0 NA A coding 512 1536 124 1659 PB.6340.1 chr11 + 1918 2 genic FAM111A novel NA NA NA NA no_subtype TRUE canonical NA NA 1228 None 3 13 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.4206.3 chr6 - 2923 7 full-splice_match MTRF1L ENST00000464135.5 3651 7 7 721 no_subtype FALSE canonical NA NA 252 None 26 12 0 FALSE 0 0 NA C coding 238 714 395 1108 PB.9289.1 chr17 + 1444 5 full-splice_match TACO1 ENST00000258975.6 1469 5 23 2 no_subtype FALSE canonical NA NA 882 None 15 2 0 FALSE 0 0 NA A coding 297 891 190 1080 PB.5679.1 chr10 + 4137 18 novel_not_in_catalog DHTKD1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3094 None 2 12 0 TRUE 0 0 NA A coding 919 2757 82 2838 PB.11030.1 chrX - 1745 11 full-splice_match HDAC8 ENST00000373573.7 2014 11 260 9 no_subtype FALSE canonical NA NA 193 None 9 3 0 FALSE 0 0 NA C coding 377 1131 83 1213 PB.2556.3 chr3 + 3000 9 full-splice_match MFSD1 ENST00000465624.5 1029 9 28 -1999 no_subtype FALSE canonical NA NA 816 None 2 13 0 FALSE 0 0 NA C coding 150 450 368 817 PB.5100.3 chr8 - 2188 8 full-splice_match DERL1 ENST00000259512.8 3340 8 164 988 no_subtype FALSE canonical NA NA 290 None 77 9 0 FALSE 0 0 NA C coding 251 753 138 890 PB.5460.11 chr9 - 5616 24 fusion RP11-9M16.2,AKNA novel NA NA NA NA no_subtype FALSE canonical NA NA 33 None 8 12 2 TRUE 0 0 NA B coding 1439 4317 373 4689 PB.1276.1 chr2 - 3155 16 full-splice_match CEBPZ ENST00000234170.9 3463 16 128 180 no_subtype FALSE canonical NA NA 174 None 34 1 0 FALSE 0 0 NA C coding 1045 3135 19 3153 PB.5837.3 chr10 - 4118 8 full-splice_match DNAJB12 ENST00000338820.7 4360 8 233 9 no_subtype FALSE canonical NA NA 152 None 3 15 0 FALSE 0 0 NA C coding 375 1125 20 1144 PB.1276.3 chr2 - 1433 2 incomplete-splice_match CEBPZ ENST00000234170.9 3463 16 128 1902 internal_fragment FALSE canonical NA NA 174 None 4 0 0 FALSE 0 0 NA C coding 471 1413 19 1431 PB.1276.2 chr2 - 2888 13 novel_in_catalog CEBPZ novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 159 None 2 1 0 FALSE 0 0 NA C coding 961 2883 4 2886 PB.9394.4 chr17 - 2700 3 novel_not_in_catalog SRSF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 534 None 2 5 1 TRUE 0 0 NA C coding 209 627 209 835 PB.5460.12 chr9 - 5498 23 fusion RP11-9M16.2,AKNA novel NA NA NA NA no_subtype FALSE canonical NA NA 33 None 3 9 0 FALSE 0 0 NA B coding 1439 4317 255 4571 PB.1535.4 chr2 + 3383 11 novel_not_in_catalog LIMS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3334 None 2 16 0 TRUE 0 0 NA C coding 362 1086 132 1217 PB.6794.9 chr12 + 2043 16 novel_not_in_catalog PTPN6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1858 None 16 1 0 TRUE 0 0 NA C coding 520 1560 119 1678 PB.11088.1 chrX - 2645 2 genic RP1-232L22__B.1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1677 None 8 4 0 FALSE 0 0 NA A coding 319 957 729 1685 PB.6107.2 chr11 - 1630 10 full-splice_match SIGIRR ENST00000431843.6 1720 10 87 3 no_subtype FALSE canonical NA NA 67 None 25 3 0 FALSE 0 0 NA C coding 410 1230 221 1450 PB.3771.1 chr6 + 3129 1 genic_intron novelGene_169 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.788.1 chr1 + 2819 17 full-splice_match NCSTN ENST00000294785.9 2936 17 112 5 no_subtype FALSE canonical NA NA 2020 None 238 4 0 FALSE 0 0 NA C coding 709 2127 14 2140 PB.1327.1 chr2 + 4254 10 full-splice_match MSH6 ENST00000234420.9 7476 10 66 3156 no_subtype FALSE canonical NA NA 4087 None 12 2 0 FALSE 0 0 NA A coding 1360 4080 87 4166 PB.6215.1 chr11 + 3134 3 antisense novelGene_RRAS2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2932 None 4 34 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.4688.2 chr7 - 5882 4 novel_not_in_catalog C7orf49 novel NA NA NA NA no_subtype FALSE canonical NA NA 277 None 3 27 1 TRUE 0 0 NA A coding 157 471 141 611 PB.2036.2 chr3 - 3058 2 novel_not_in_catalog DPH3 novel NA NA NA NA no_subtype FALSE canonical NA NA 214 None 5 12 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.8340.2 chr16 - 1451 10 full-splice_match LUC7L ENST00000397783.5 1504 10 32 21 no_subtype FALSE canonical NA NA 153 None 2 1 0 FALSE 0 0 NA C coding 325 975 93 1067 PB.88.2 chr1 - 1528 1 full-splice_match EIF1AXP1 ENST00000419267.1 435 1 -166 -927 no_subtype FALSE canonical NA NA NA None 9 12 0 FALSE 0 0 NA C coding 144 432 167 598 PB.8340.4 chr16 - 3375 10 novel_in_catalog LUC7L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2145 None 2 9 0 FALSE 0 0 NA C coding 285 855 2312 3166 PB.5106.1 chr8 - 1575 14 novel_not_in_catalog ANXA13 novel NA NA NA NA no_subtype TRUE canonical NA NA 72 None 4 1 0 TRUE 0 0 NA B coding 357 1071 58 1128 PB.6929.1 chr12 - 3433 28 full-splice_match RAPGEF3 ENST00000449771.6 6061 28 -269 2897 no_subtype FALSE canonical NA NA 364 None 2 2 0 FALSE 0 0 NA A coding 923 2769 359 3127 PB.5460.19 chr9 - 5871 21 novel_not_in_catalog AKNA novel NA NA NA NA no_subtype FALSE canonical NA NA 390 None 3 16 1 FALSE 0 0 NA B coding 972 2916 117 3032 PB.2036.1 chr3 - 3119 3 full-splice_match DPH3 ENST00000488423.1 3131 3 9 3 no_subtype FALSE canonical NA NA 195 None 27 12 0 FALSE 0 0 NA C coding 82 246 88 333 PB.9169.14 chr17 + 1491 7 novel_in_catalog GRN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1049 None 2 0 0 FALSE 0 0 NA C coding 387 1161 24 1184 PB.4609.1 chr7 - 1547 2 genic_intron novelGene_991 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 469 None 3 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8040.3 chr15 + 2748 17 novel_not_in_catalog TUBGCP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1911 None 2 6 0 FALSE 0 0 NA C coding 491 1473 449 1921 PB.10873.1 chrX - 3940 8 novel_not_in_catalog GPM6B novel NA NA NA NA no_subtype FALSE canonical NA NA 136 None 3 28 1 TRUE 0 0 NA A coding 246 738 133 870 PB.11003.1 chrX - 2416 13 full-splice_match LAS1L ENST00000374807.9 2386 13 -32 2 no_subtype FALSE canonical NA NA 307 None 3 5 0 FALSE 0 0 NA A coding 717 2151 72 2222 PB.143.4 chr1 - 3007 6 full-splice_match SRSF10 ENST00000492112.2 1631 6 -105 -1271 no_subtype FALSE canonical NA NA 234 None 109 8 0 FALSE 0 0 NA C coding 262 786 170 955 PB.1883.1 chr2 + 4682 6 novel_not_in_catalog SGPP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 3190 None 5 29 0 TRUE 0 0 NA A coding 399 1197 63 1259 PB.8360.1 chr16 + 3387 23 incomplete-splice_match BAIAP3 ENST00000397488.6 4583 34 1194 2 internal_fragment FALSE canonical NA NA 2329 None 2 7 0 FALSE 0 0 NA A coding 793 2379 52 2430 PB.3869.1 chr6 + 3689 9 novel_not_in_catalog PPARD novel NA NA NA NA no_subtype FALSE canonical NA NA 1346 None 30 11 0 TRUE 0 0 NA B coding 441 1323 269 1591 PB.3869.3 chr6 + 3658 8 novel_not_in_catalog PPARD novel NA NA NA NA no_subtype FALSE canonical NA NA 1307 None 16 13 1 TRUE 0 0 NA B coding 441 1323 230 1552 PB.10914.2 chrX - 1828 10 full-splice_match SRPX ENST00000378533.3 1874 10 39 7 no_subtype FALSE canonical NA NA 165 None 2 6 0 FALSE 0 0 NA C coding 464 1392 69 1460 PB.2916.1 chr4 - 1443 1 incomplete-splice_match LIN54 ENST00000446851.6 4083 13 2632 9 no_subtype FALSE canonical NA NA NA None 6 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10101.1 chr19 + 4043 25 novel_not_in_catalog TRPM4 novel NA NA NA NA no_subtype TRUE canonical NA NA 3716 None 33 5 1 FALSE 0 0 NA A coding 737 2211 73 2283 PB.10914.1 chrX - 1786 9 full-splice_match SRPX ENST00000544439.5 1842 9 46 10 no_subtype FALSE canonical NA NA 183 None 2 7 0 FALSE 0 0 NA C coding 444 1332 87 1418 PB.8115.2 chr15 + 1161 1 full-splice_match RP11-123C21.1 ENST00000331871.3 207 1 10 -964 no_subtype FALSE canonical NA NA NA None 5 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7929.1 chr14 + 7268 45 incomplete-splice_match DYNC1H1 ENST00000360184.8 14333 78 7062 3 internal_fragment FALSE canonical NA NA 6914 None 2 4 1 FALSE 0 0 NA B coding 2305 6915 126 7040 PB.1152.1 chr1 - 2970 1 genic_intron novelGene_1423 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 29 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3057.1 chr4 + 1832 4 full-splice_match SCOC ENST00000394203.7 1999 4 158 9 no_subtype FALSE canonical NA NA 246 None 4 10 0 FALSE 0 0 NA C coding 122 366 21 386 PB.958.1 chr1 - 2738 3 novel_not_in_catalog LMOD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 465 None 96 2 1 FALSE 0 0 NA A coding 674 2022 205 2226 PB.1204.1 chr2 + 2664 4 antisense novelGene_TTC32_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2420 None 2 19 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.23.1 chr1 - 1644 5 novel_not_in_catalog C1orf174 novel NA NA NA NA no_subtype FALSE canonical NA NA 107 None 12 11 0 TRUE 0 0 NA B coding 243 729 93 821 PB.23.2 chr1 - 1641 4 novel_not_in_catalog C1orf174 novel NA NA NA NA no_subtype FALSE canonical NA NA 111 None 2 12 0 FALSE 0 0 NA B coding 65 195 624 818 PB.8831.3 chr17 - 7267 43 full-splice_match PRPF8 ENST00000304992.10 7295 43 20 8 no_subtype FALSE canonical NA NA 83 None 42 2 0 FALSE 0 0 NA C coding 2335 7005 95 7099 PB.11064.1 chrX + 2677 1 novel_in_catalog APOOL novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10355.1 chr20 - 2915 2 novel_not_in_catalog NORAD novel NA NA NA NA no_subtype FALSE canonical NA NA 1469 None 6 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1038.2 chr1 - 3163 20 full-splice_match INTS7 ENST00000366994.7 4417 20 -2 1256 no_subtype FALSE canonical NA NA 201 None 2 2 0 FALSE 0 0 NA C coding 962 2886 108 2993 PB.8831.4 chr17 - 7414 42 full-splice_match PRPF8 ENST00000572621.5 7445 42 23 8 no_subtype FALSE canonical NA NA 343 None 19 4 0 FALSE 0 0 NA C coding 2335 7005 244 7248 PB.2655.3 chr3 + 4295 8 novel_not_in_catalog ST6GAL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3120 None 2 20 1 TRUE 0 0 NA B coding 406 1218 341 1558 PB.7449.1 chr13 - 1312 1 genic_intron novelGene_407 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4281.1 chr7 - 1291 6 full-splice_match ACTB ENST00000331789.9 1917 6 108 518 no_subtype FALSE canonical NA NA 78 None 12223 0 0 FALSE 0 0 NA C coding 375 1125 85 1209 PB.476.2 chr1 + 3302 4 novel_not_in_catalog LRRC8D novel NA NA NA NA no_subtype FALSE canonical NA NA 385 None 2 2 0 FALSE 0 0 NA C coding 858 2574 388 2961 PB.4281.4 chr7 - 510 1 incomplete-splice_match ACTB ENST00000425660.5 1845 7 1334 2 no_subtype FALSE canonical NA NA NA None 5 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4281.5 chr7 - 1746 6 novel_not_in_catalog ACTB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 78 None 2 7 0 TRUE 0 0 NA C coding 359 1077 85 1161 PB.4281.6 chr7 - 1452 5 novel_not_in_catalog ACTB novel NA NA NA NA no_subtype FALSE canonical NA NA 73 None 4 6 0 TRUE 0 0 NA C coding 257 771 89 859 PB.4281.8 chr7 - 1752 7 novel_not_in_catalog ACTB novel NA NA NA NA no_subtype FALSE canonical NA NA 78 None 3 5 1 TRUE 0 0 NA C coding 358 1074 85 1158 PB.4281.9 chr7 - 1623 5 novel_not_in_catalog ACTB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 23 None 2 5 1 TRUE 0 0 NA C coding 332 996 34 1029 PB.8368.1 chr16 + 3004 6 novel_not_in_catalog HN1L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1275 None 66 13 1 TRUE 0 0 NA A coding 190 570 31 600 PB.730.1 chr1 + 1681 15 novel_not_in_catalog DAP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1313 None 13 3 1 TRUE 0 0 NA B coding 398 1194 203 1396 PB.2655.4 chr3 + 3460 1 genic_intron novelGene_1352 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10669.1 chr22 + 3111 16 novel_not_in_catalog SUSD2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2812 None 2 2 0 TRUE 0 0 NA A coding 822 2466 34 2499 PB.10428.6 chr20 - 1803 1 genic_intron novelGene_470 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA A coding 150 450 431 880 PB.7959.2 chr14 - 1474 7 fusion IGHA2,IGHV4-4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 18 2 TRUE 0 0 NA B coding 158 474 11 484 PB.7230.2 chr12 - 2093 11 full-splice_match CORO1C ENST00000261401.7 3892 11 72 1727 no_subtype FALSE canonical NA NA 96 None 70 4 0 FALSE 0 0 NA A coding 474 1422 102 1523 PB.1960.8 chr2 + 2830 8 incomplete-splice_match SEPT2 ENST00000407971.5 3267 12 433 4 internal_fragment FALSE canonical NA NA 773 None 5 21 0 FALSE 0 0 NA C coding 194 582 160 741 PB.2397.1 chr3 + 1844 7 novel_not_in_catalog UPK1B novel NA NA NA NA no_subtype FALSE canonical NA NA 632 None 2 8 0 FALSE 0 0 NA B coding 200 600 81 680 PB.8991.1 chr17 + 3738 2 genic_intron novelGene_273 novel NA NA NA NA no_subtype FALSE canonical NA NA 3356 None 2 30 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.730.2 chr1 + 1573 14 novel_not_in_catalog DAP3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1204 None 8 1 0 TRUE 0 0 NA B coding 398 1194 94 1287 PB.759.3 chr1 - 3557 6 novel_in_catalog FCRL5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1724 None 2 16 0 FALSE 0 0 NA A coding 150 450 2823 3272 PB.1893.1 chr2 - 3026 18 novel_in_catalog DOCK10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 104 None 2 3 0 FALSE 0 0 NA B coding 763 2289 106 2394 PB.1893.2 chr2 - 3167 2 novel_in_catalog DOCK10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1724 None 2 20 0 FALSE 0 0 NA B coding 212 636 1445 2080 PB.1893.3 chr2 - 2992 1 novel_in_catalog DOCK10 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 20 0 FALSE 0 0 NA B coding 102 306 1447 1752 PB.2605.2 chr3 - 3190 10 full-splice_match GNB4 ENST00000232564.7 6434 10 116 3128 no_subtype FALSE canonical NA NA 129 None 7 18 0 FALSE 0 0 NA A coding 340 1020 172 1191 PB.800.2 chr1 - 1805 11 full-splice_match USF1 ENST00000368021.7 1807 11 0 2 no_subtype FALSE canonical NA NA 120 None 2 5 0 FALSE 0 0 NA C coding 310 930 206 1135 PB.7959.168 chr14 - 1558 9 fusion IGHV3-53,IGHV3-52,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 119 None 2 8 4 TRUE 0 0 NA A coding 196 588 836 1423 PB.7959.169 chr14 - 1536 7 fusion IGHG1,IGHV3-7,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 4 7 3 TRUE 0 0 NA B coding 196 588 814 1401 PB.800.3 chr1 - 1968 10 novel_in_catalog USF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 39 None 2 5 0 FALSE 0 0 NA C coding 244 732 125 856 PB.7959.164 chr14 - 1497 10 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 83 None 2 18 5 TRUE 0 0 NA B coding 196 588 775 1362 PB.7959.165 chr14 - 1508 8 fusion IGHV1-24,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 103 None 2 9 4 TRUE 0 0 NA B coding 196 588 786 1373 PB.7959.166 chr14 - 1574 11 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 16 6 TRUE 0 0 NA B coding 196 588 852 1439 PB.6240.4 chr11 + 3300 2 novel_not_in_catalog HTATIP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1372 None 3 20 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.6240.3 chr11 + 1463 6 full-splice_match HTATIP2 ENST00000419348.6 1477 6 5 9 no_subtype FALSE canonical NA NA 669 None 23 4 0 FALSE 0 0 NA C coding 276 828 65 892 PB.6240.2 chr11 + 1809 5 full-splice_match HTATIP2 ENST00000451739.6 1748 5 -72 11 no_subtype FALSE canonical NA NA 1016 None 2 4 0 FALSE 0 0 NA C coding 242 726 514 1239 PB.6240.1 chr11 + 1313 6 novel_not_in_catalog HTATIP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 526 None 2 3 1 TRUE 0 0 NA C coding 242 726 24 749 PB.7959.163 chr14 - 1526 8 fusion IGHV4-4,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 21 3 TRUE 0 0 NA B coding 196 588 804 1391 PB.7226.4 chr12 - 3673 19 novel_not_in_catalog SART3 novel NA NA NA NA no_subtype FALSE canonical NA NA 323 None 10 7 1 FALSE 0 0 NA B coding 702 2106 799 2904 PB.10349.2 chr20 + 2888 4 full-splice_match ERGIC3 ENST00000279052.10 2846 4 -51 9 no_subtype FALSE canonical NA NA 314 None 4 15 0 FALSE 0 0 NA C coding 145 435 68 502 PB.10349.1 chr20 + 1297 13 full-splice_match ERGIC3 ENST00000348547.6 1359 13 60 2 no_subtype FALSE canonical NA NA 1089 None 26 2 0 FALSE 0 0 NA C coding 383 1149 18 1166 PB.1845.24 chr2 - 5353 31 novel_in_catalog FN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 164 None 2 13 1 FALSE 0 0 NA C coding 1341 4023 641 4663 PB.1596.1 chr2 + 6087 2 genic MIR3679 novel NA NA NA NA no_subtype FALSE canonical NA NA 6039 None 4 39 1 FALSE 0 0 NA B coding 104 312 387 698 PB.356.1 chr1 - 1703 13 full-splice_match SPATA6 ENST00000371847.7 4973 13 -9 3279 no_subtype FALSE canonical NA NA 225 None 2 6 0 FALSE 0 0 NA A coding 488 1464 175 1638 PB.10094.3 chr19 + 2597 7 novel_not_in_catalog SPHK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2171 None 2 3 1 TRUE 0 0 NA B coding 618 1854 138 1991 PB.10766.1 chr22 - 2624 1 incomplete-splice_match CBX6 ENST00000216083.6 3191 5 537 31 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C coding 186 558 115 672 PB.2873.7 chr4 - 2770 1 genic_intron novelGene_686 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10094.4 chr19 + 2974 7 novel_not_in_catalog SPHK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2548 None 2 8 1 TRUE 0 0 NA B coding 618 1854 515 2368 PB.7057.1 chr12 - 1831 1 full-splice_match MIR616 ENST00000385293.1 97 1 -1252 -482 no_subtype FALSE canonical NA NA NA None 6 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.658.6 chr1 - 1686 1 novel_in_catalog MCL1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6860.3 chr12 + 3242 8 full-splice_match ETNK1 ENST00000266517.8 7159 8 98 3819 no_subtype TRUE canonical NA NA 1277 None 10 10 0 FALSE 0 0 NA C coding 363 1089 259 1347 PB.5550.4 chr9 - 2037 9 novel_not_in_catalog ZER1 novel NA NA NA NA no_subtype FALSE canonical NA NA 287 None 4 5 0 TRUE 0 0 NA B coding 552 1656 382 2037 PB.9571.1 chr18 + 3802 9 novel_in_catalog POLI novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2725 None 3 11 0 FALSE 0 0 NA A coding 265 795 620 1414 PB.800.4 chr1 - 1485 1 incomplete-splice_match ARHGAP30 ENST00000368015.1 3887 8 2401 2 no_subtype FALSE canonical NA NA NA None 8 4 0 FALSE 0 0 NA C coding 217 651 68 718 PB.1380.2 chr2 + 2755 8 novel_not_in_catalog CEP68 novel NA NA NA NA no_subtype FALSE canonical NA NA 2440 None 8 3 0 TRUE 0 0 NA B coding 757 2271 163 2433 PB.1157.1 chr1 + 3068 2 novel_not_in_catalog DESI2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1886 None 2 28 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.7134.1 chr12 + 2909 1 antisense novelGene_PAWR_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1226.2 chr2 - 3525 19 novel_in_catalog HADHA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 127 None 3 9 0 FALSE 0 0 NA B coding 602 1806 61 1866 PB.6686.9 chr11 + 2819 14 novel_in_catalog C2CD2L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1748 None 2 3 0 FALSE 0 0 NA A coding 557 1671 287 1957 PB.1026.4 chr1 + 1890 15 novel_not_in_catalog TRAF3IP3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1638 None 2 2 1 FALSE 0 0 NA B coding 443 1329 231 1559 PB.1226.1 chr2 - 2689 21 novel_not_in_catalog HADHA novel NA NA NA NA no_subtype TRUE canonical NA NA 90 None 221 5 0 TRUE 0 0 NA B coding 763 2289 24 2312 PB.6906.6 chr12 + 6808 40 novel_not_in_catalog LRRK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 6152 None 2 8 1 TRUE 0 0 NA B coding 2079 6237 35 6271 PB.5437.2 chr9 - 5700 50 novel_not_in_catalog KIAA0368 novel NA NA NA NA no_subtype TRUE canonical NA NA 66 None 18 2 0 TRUE 0 0 NA B coding 1839 5517 45 5561 PB.5963.1 chr10 + 2969 13 full-splice_match ENTPD7 ENST00000370489.4 3550 13 31 550 no_subtype FALSE canonical NA NA 1730 None 2 6 0 FALSE 0 0 NA A coding 604 1812 148 1959 PB.3137.1 chr4 - 1914 6 full-splice_match DCTD ENST00000357067.7 1931 6 5 12 no_subtype FALSE canonical NA NA 87 None 11 7 0 FALSE 0 0 NA C coding 178 534 95 628 PB.9811.2 chr19 - 1291 9 novel_not_in_catalog STX10 novel NA NA NA NA no_subtype FALSE canonical NA NA 233 None 4 3 0 TRUE 0 0 NA A coding 249 747 199 945 PB.1432.14 chr2 + 3050 13 novel_not_in_catalog TTC31 novel NA NA NA NA no_subtype FALSE canonical NA NA 1744 None 2 12 0 TRUE 0 0 NA B coding 430 1290 1 1290 PB.10675.1 chr22 + 3891 4 genic YES1P1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3134 None 12 27 2 TRUE 0 0 NA A coding 243 729 951 1679 PB.9543.1 chr18 - 3170 1 antisense novelGene_ELP2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 20 0 FALSE 0 0 NA A coding 137 411 2012 2422 PB.6978.1 chr12 - 2094 12 novel_not_in_catalog BIN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 104 None 2 2 0 FALSE 0 0 NA B coding 536 1608 24 1631 PB.800.9 chr1 - 4308 13 novel_not_in_catalog ARHGAP30 novel NA NA NA NA no_subtype FALSE canonical NA NA 347 None 2 8 1 TRUE 0 0 NA C coding 947 2841 700 3540 PB.3137.3 chr4 - 3267 5 novel_in_catalog DCTD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 72 None 2 25 0 FALSE 0 0 NA C coding 138 414 80 493 PB.5201.1 chr9 + 3199 18 full-splice_match VLDLR ENST00000382099.2 3240 18 39 2 no_subtype FALSE canonical NA NA 2553 None 6 4 0 FALSE 0 0 NA A coding 845 2535 52 2586 PB.8603.2 chr16 + 3063 6 novel_in_catalog NOD2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2550 None 2 5 0 FALSE 0 0 NA B coding 793 2379 86 2464 PB.8603.3 chr16 + 7417 7 novel_not_in_catalog NOD2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5828 None 2 36 2 TRUE 0 0 NA B coding 793 2379 67 2445 PB.8603.1 chr16 + 4370 12 novel_in_catalog NOD2 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 3045 None 4 5 0 FALSE 0 0 NA B coding 1013 3039 77 3115 PB.2241.2 chr3 - 1858 1 incomplete-splice_match PBRM1 ENST00000356770.8 7523 28 5149 517 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2933.3 chr4 + 3776 1 genic_intron novelGene_777 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8603.4 chr16 + 5690 8 novel_not_in_catalog NOD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5177 None 2 28 2 TRUE 0 0 NA B coding 330 990 316 1305 PB.8603.5 chr16 + 5757 4 novel_not_in_catalog NOD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4563 None 2 24 1 TRUE 0 0 NA B coding 330 990 2 991 PB.5517.1 chr9 - 3568 5 full-splice_match ANGPTL2 ENST00000373425.7 3707 5 118 21 no_subtype FALSE canonical NA NA 451 None 23 7 0 FALSE 0 0 NA C coding 493 1479 501 1979 PB.1023.1 chr1 + 2813 2 genic_intron novelGene_1391 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 25 None 4 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4434.1 chr7 + 1095 3 full-splice_match VKORC1L1 ENST00000360768.3 5899 3 46 4758 no_subtype FALSE canonical NA NA 363 None 2 6 0 FALSE 0 0 NA C coding 176 528 60 587 PB.8107.1 chr15 + 3403 2 genic_intron novelGene_555 novel NA NA NA NA no_subtype FALSE canonical NA NA 2714 None 2 25 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8107.2 chr15 + 3202 1 genic_intron novelGene_555 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2261.1 chr3 - 1731 6 full-splice_match ARF4 ENST00000303436.10 1660 6 -77 6 no_subtype TRUE canonical NA NA 412 None 128 4 0 FALSE 0 0 NA A coding 180 540 346 885 PB.390.1 chr1 - 3152 9 full-splice_match DHCR24 ENST00000371269.7 4250 9 23 1075 no_subtype FALSE canonical NA NA 307 None 37 8 0 FALSE 0 0 NA A coding 516 1548 77 1624 PB.6098.1 chr10 - 1291 8 full-splice_match ECHS1 ENST00000368547.3 1617 8 317 9 no_subtype FALSE canonical NA NA 127 None 32 7 0 FALSE 0 0 NA A coding 290 870 40 909 PB.4112.1 chr6 - 1965 1 genic_intron novelGene_1065 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.197.1 chr1 - 1389 1 full-splice_match SPCS2P4 ENST00000436160.1 681 1 -19 -689 no_subtype FALSE canonical NA NA NA None 105 2 0 FALSE 0 0 NA A coding 226 678 20 697 PB.4735.1 chr7 - 3129 1 intergenic novelGene_1236 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A coding 111 333 1316 1648 PB.1550.2 chr2 + 3330 11 novel_not_in_catalog SLC20A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2375 None 3 15 0 TRUE 0 0 NA C coding 426 1278 1257 2534 PB.4972.2 chr8 - 2834 14 novel_in_catalog STAU2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 58 None 2 4 0 FALSE 0 0 NA B coding 538 1614 220 1833 PB.8086.1 chr15 - 1923 13 novel_not_in_catalog LEO1 novel NA NA NA NA no_subtype TRUE canonical NA NA 71 None 6 0 0 TRUE 0 0 NA B coding 636 1908 14 1921 PB.4972.4 chr8 - 3110 12 novel_not_in_catalog STAU2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 61 None 2 10 0 TRUE 0 0 NA B coding 479 1437 223 1659 PB.8086.2 chr15 - 1605 10 novel_not_in_catalog LEO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 68 None 2 0 0 TRUE 0 0 NA B coding 531 1593 11 1603 PB.9438.1 chr17 - 1200 5 novel_not_in_catalog MCRIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 31 None 3 4 0 FALSE 0 0 NA A coding 97 291 78 368 PB.8274.1 chr15 - 3661 3 novel_not_in_catalog KLHL25 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 181 None 16 12 0 FALSE 0 0 NA A coding 589 1767 193 1959 PB.339.1 chr1 - 3065 11 full-splice_match TESK2 ENST00000372086.3 3074 11 6 3 no_subtype FALSE canonical NA NA 309 None 24 4 0 FALSE 0 0 NA C coding 571 1713 396 2108 PB.562.2 chr1 + 6300 2 novel_not_in_catalog CEPT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 873 None 3 55 1 TRUE 0 0 NA C coding 117 351 5646 5996 PB.562.1 chr1 + 2048 9 full-splice_match CEPT1 ENST00000357172.8 2198 9 29 121 no_subtype FALSE canonical NA NA 1257 None 4 5 0 FALSE 0 0 NA C coding 416 1248 127 1374 PB.4519.1 chr7 - 1594 9 full-splice_match PON2 ENST00000633531.1 1653 9 55 4 no_subtype FALSE canonical NA NA 140 None 42 2 0 FALSE 0 0 NA A coding 375 1125 4 1128 PB.5983.8 chr10 - 3449 8 incomplete-splice_match MGEA5 ENST00000439817.5 5043 15 1583 11 5prime_fragment FALSE canonical NA NA 510 None 2 19 0 FALSE 0 0 NA C coding 479 1437 13 1449 PB.2289.1 chr3 - 2347 11 full-splice_match SUCLG2 ENST00000307227.9 2352 11 -1 6 no_subtype FALSE canonical NA NA 113 None 4 3 0 FALSE 0 0 NA A coding 432 1296 30 1325 PB.7439.4 chr13 - 3513 25 novel_not_in_catalog SUPT20H novel NA NA NA NA no_subtype FALSE canonical NA NA 47 None 2 8 2 TRUE 0 0 NA B coding 534 1602 141 1742 PB.4376.23 chr7 - 2635 1 genic_intron novelGene_367 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6926.1 chr12 + 1731 2 incomplete-splice_match PCED1B ENST00000546455.5 2328 4 563 34 internal_fragment FALSE canonical NA NA 111 None 6 2 0 FALSE 0 0 NA B coding 432 1296 169 1464 PB.5983.2 chr10 - 3762 15 novel_not_in_catalog MGEA5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 625 None 3 16 1 TRUE 0 0 NA C coding 568 1704 754 2457 PB.5983.3 chr10 - 3473 14 novel_not_in_catalog MGEA5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 333 None 2 14 0 TRUE 0 0 NA C coding 677 2031 135 2165 PB.1206.2 chr2 - 2664 11 genic_intron novelGene_196 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 22 None 2 33 6 FALSE 0 0 NA A coding 124 372 1417 1788 PB.1133.1 chr1 - 5877 20 full-splice_match NID1 ENST00000264187.6 5864 20 -37 24 no_subtype FALSE canonical NA NA 345 None 7 8 0 FALSE 0 0 NA A coding 1247 3741 121 3861 PB.7116.1 chr12 + 1818 3 antisense novelGene_AC092881.1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 268 None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7608.32 chr14 + 1343 9 fusion TRAC,TRAV24 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 806 None 2 5 4 TRUE 0 0 NA A coding 266 798 5 802 PB.7608.33 chr14 + 1461 7 fusion TRAC,TRAV25 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 924 None 2 6 0 TRUE 0 0 NA B coding 152 456 4 459 PB.7608.34 chr14 + 1417 6 fusion TRAC,TRAV25 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 871 None 2 7 1 TRUE 0 0 NA B coding 118 354 67 420 PB.7608.35 chr14 + 1385 9 fusion TRAC,TRAV25 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 839 None 2 7 2 TRUE 0 0 NA B coding 130 390 22 411 PB.7608.36 chr14 + 1472 7 fusion TRAV26-1,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 922 None 2 6 2 TRUE 0 0 NA B coding 154 462 457 918 PB.7608.37 chr14 + 1417 8 fusion TRAV26-1,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 876 None 3 8 3 TRUE 0 0 NA B coding 145 435 438 872 PB.7608.38 chr14 + 1448 7 fusion TRAV26-1,TRAC novel NA NA NA NA no_subtype FALSE canonical NA NA 900 None 3 4 1 TRUE 0 0 NA B coding 147 441 456 896 PB.7608.39 chr14 + 1445 7 fusion TRAV26-1,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 903 None 2 4 1 TRUE 0 0 NA B coding 132 396 95 490 PB.6467.6 chr11 + 1618 4 full-splice_match RBM4 ENST00000310092.11 1694 4 72 4 no_subtype TRUE canonical NA NA 1179 None 35 0 0 FALSE 0 0 NA C coding 364 1092 77 1168 PB.6467.7 chr11 + 1742 4 full-splice_match RBM4 ENST00000408993.6 1763 4 34 -13 no_subtype FALSE canonical NA NA 1303 None 2 1 0 FALSE 0 0 NA C coding 364 1092 201 1292 PB.4233.1 chr6 - 3166 6 novel_not_in_catalog SOD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 93 None 2 22 0 FALSE 0 0 NA C coding 222 666 71 736 PB.6467.2 chr11 + 2772 3 full-splice_match RBM14 ENST00000310137.4 2828 3 48 8 no_subtype FALSE canonical NA NA 1893 None 132 0 0 FALSE 0 0 NA C coding 669 2007 92 2098 PB.6467.3 chr11 + 6117 2 novel_in_catalog RBM14 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 420 None 7 21 0 FALSE 0 0 NA C coding 618 1854 84 1937 PB.5215.1 chr9 - 4738 15 full-splice_match ERMP1 ENST00000339450.9 5376 15 16 622 no_subtype TRUE canonical NA NA 412 None 2 29 1 FALSE 0 0 NA A coding 904 2712 75 2786 PB.4127.1 chr6 + 2761 28 novel_not_in_catalog ENPP3 novel NA NA NA NA no_subtype TRUE canonical NA NA 2489 None 4 5 2 TRUE 0 0 NA A coding 875 2625 29 2653 PB.1257.1 chr2 - 4582 36 full-splice_match XDH ENST00000379416.3 5688 36 2 1104 no_subtype FALSE canonical NA NA 89 None 2 5 0 FALSE 0 0 NA A coding 1333 3999 48 4046 PB.8562.2 chr16 + 2074 12 full-splice_match PRR14 ENST00000300835.8 2198 12 94 30 no_subtype FALSE canonical NA NA 1695 None 2 6 0 FALSE 0 0 NA C coding 585 1755 218 1972 PB.2642.10 chr3 + 3499 10 novel_not_in_catalog SENP2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2788 None 2 19 1 TRUE 0 0 NA C coding 117 351 255 605 PB.8562.1 chr16 + 1933 12 novel_in_catalog PRR14 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1554 None 8 6 0 FALSE 0 0 NA C coding 585 1755 77 1831 PB.2321.1 chr3 - 3062 1 genic_intron novelGene_814 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3104.4 chr4 + 2670 10 full-splice_match GUCY1A3 ENST00000296518.11 4400 10 -190 1920 no_subtype FALSE canonical NA NA 2270 None 4 10 0 FALSE 0 0 NA C coding 690 2070 400 2469 PB.3104.3 chr4 + 2567 10 full-splice_match GUCY1A3 ENST00000506455.5 2715 10 132 16 no_subtype FALSE canonical NA NA 2180 None 5 3 0 FALSE 0 0 NA C coding 690 2070 310 2379 PB.8282.1 chr15 - 4458 23 full-splice_match POLG ENST00000268124.9 4500 23 41 1 no_subtype FALSE canonical NA NA 134 None 13 5 0 FALSE 0 0 NA C coding 1239 3717 294 4010 PB.3104.1 chr4 + 4129 4 genic RP11-588K22.2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 255 None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10879.1 chrX - 2865 2 genic_intron novelGene_134 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2118 None 2 20 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4228.8 chr6 - 2911 14 novel_not_in_catalog EZR novel NA NA NA NA no_subtype FALSE canonical NA NA 25 None 2 21 1 TRUE 0 0 NA C coding 358 1074 99 1172 PB.8931.2 chr17 - 2109 1 novel_in_catalog LINC00675 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA C coding 79 237 112 348 PB.451.1 chr1 + 1511 5 novel_in_catalog RPF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 492 None 3 7 0 FALSE 0 0 NA C coding 229 687 31 717 PB.11142.3 chrX - 2778 23 incomplete-splice_match THOC2 ENST00000355725.8 4930 39 13 2139 internal_fragment FALSE canonical NA NA 92 None 28 1 0 FALSE 0 0 NA B coding 919 2757 22 2778 PB.8931.1 chr17 - 1510 2 full-splice_match LINC00675 ENST00000581851.1 1530 2 0 20 no_subtype FALSE canonical NA NA 494 None 11 4 0 FALSE 0 0 NA C coding 79 237 137 373 PB.5055.2 chr8 - 2638 13 full-splice_match AZIN1 ENST00000347770.8 2857 13 29 190 no_subtype FALSE canonical NA NA 358 None 19 3 0 FALSE 0 0 NA C coding 448 1344 738 2081 PB.5055.3 chr8 - 3848 12 novel_not_in_catalog AZIN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 359 None 2 9 0 TRUE 0 0 NA C coding 363 1089 593 1681 PB.4228.1 chr6 - 2749 15 novel_not_in_catalog EZR novel NA NA NA NA no_subtype TRUE non_canonical NA NA 47 None 2 17 1 TRUE 0 0 NA C coding 411 1233 154 1386 PB.5055.1 chr8 - 2839 12 novel_not_in_catalog AZIN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 357 None 104 4 1 FALSE 0 0 NA C coding 448 1344 589 1932 PB.4228.7 chr6 - 2890 13 novel_in_catalog EZR novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 54 None 3 21 0 FALSE 0 0 NA C coding 386 1158 128 1285 PB.4228.6 chr6 - 2047 1 novel_in_catalog EZR novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA C coding 106 318 339 656 PB.4228.5 chr6 - 3864 13 novel_in_catalog EZR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 47 None 2 35 2 FALSE 0 0 NA C coding 422 1266 121 1386 PB.5055.5 chr8 - 2885 13 novel_not_in_catalog AZIN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 357 None 2 9 2 TRUE 0 0 NA C coding 448 1344 636 1979 PB.8911.1 chr17 + 5638 34 incomplete-splice_match CHD3 ENST00000330494.11 7328 40 1131 559 internal_fragment FALSE canonical NA NA 4900 None 2 5 0 FALSE 0 0 NA A coding 1545 4635 385 5019 PB.6477.1 chr11 - 1409 7 full-splice_match PPP1CA ENST00000376745.8 1476 7 75 -8 no_subtype FALSE canonical NA NA 129 None 311 4 0 FALSE 0 0 NA A coding 330 990 75 1064 PB.9907.1 chr19 + 558 1 full-splice_match CTC-260E6.2 ENST00000497576.1 441 1 -55 -62 no_subtype FALSE canonical NA NA NA None 2 0 0 FALSE 0 0 NA A coding 146 438 56 493 PB.9991.1 chr19 - 1123 9 novel_in_catalog FBL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 92 None 5 5 0 FALSE 0 0 NA A coding 235 705 338 1042 PB.658.5 chr1 - 2537 3 full-splice_match MCL1 ENST00000369026.2 3932 3 -20 1415 no_subtype FALSE canonical NA NA 768 None 24 12 0 FALSE 0 0 NA C coding 350 1050 81 1130 PB.3107.1 chr4 - 3023 6 full-splice_match PDGFC ENST00000502773.5 4165 6 -25 1167 no_subtype FALSE canonical NA NA 634 None 2 13 0 FALSE 0 0 NA A coding 345 1035 517 1551 PB.1864.1 chr2 - 1470 10 full-splice_match RNF25 ENST00000295704.6 1914 10 432 12 no_subtype FALSE canonical NA NA 50 None 8 2 0 FALSE 0 0 NA A coding 459 1377 10 1386 PB.11169.1 chrX - 3581 4 full-splice_match MMGT1 ENST00000305963.2 3738 4 148 9 no_subtype FALSE canonical NA NA 319 None 30 17 0 FALSE 0 0 NA A coding 131 393 241 633 PB.8558.1 chr16 - 1861 1 full-splice_match SEPHS2 ENST00000478753.4 2551 1 307 383 no_subtype FALSE canonical NA NA NA None 23 7 0 FALSE 0 0 NA A coding 330 990 502 1491 PB.3620.2 chr5 - 2154 12 full-splice_match CLINT1 ENST00000411809.6 3440 12 49 1237 no_subtype FALSE canonical NA NA 197 None 59 2 0 FALSE 0 0 NA C coding 625 1875 157 2031 PB.6724.1 chr11 - 3147 2 genic RP11-50B3.4 novel NA NA NA NA no_subtype TRUE canonical NA NA 2490 None 4 17 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.1493.1 chr2 - 1224 8 full-splice_match FAHD2B ENST00000272610.3 1305 8 62 19 no_subtype FALSE canonical NA NA 120 None 5 4 0 FALSE 0 0 NA A coding 314 942 127 1068 PB.7045.2 chr12 - 1624 7 full-splice_match PTGES3 ENST00000448157.6 1017 7 -40 -567 no_subtype FALSE canonical NA NA 327 None 2 5 0 FALSE 0 0 NA C coding 139 417 326 742 PB.7045.1 chr12 - 1581 8 full-splice_match PTGES3 ENST00000262033.10 1920 8 76 263 no_subtype FALSE canonical NA NA 227 None 132 6 0 FALSE 0 0 NA C coding 160 480 226 705 PB.9796.1 chr19 + 1470 1 antisense novelGene_C19orf43_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.718.1 chr1 + 1338 6 full-splice_match SLC50A1 ENST00000368404.8 1300 6 -43 5 no_subtype FALSE canonical NA NA 669 None 6 3 0 FALSE 0 0 NA A coding 221 663 106 768 PB.9426.1 chr17 + 6834 36 novel_not_in_catalog RPTOR novel NA NA NA NA no_subtype FALSE canonical NA NA 5957 None 2 27 0 TRUE 0 0 NA A coding 1335 4005 802 4806 PB.3981.1 chr6 + 2953 6 incomplete-splice_match PHF3 ENST00000262043.7 8233 16 -5 5285 3prime_fragment FALSE canonical NA NA 2841 None 2 0 0 FALSE 0 0 NA C coding 869 2607 346 2952 PB.8976.1 chr17 - 1624 6 full-splice_match MFAP4 ENST00000299610.4 1873 6 24 225 no_subtype FALSE canonical NA NA 67 None 106 5 0 FALSE 0 0 NA C coding 255 765 62 826 PB.5166.1 chr8 + 1182 7 full-splice_match CYC1 ENST00000318911.4 1240 7 55 3 no_subtype FALSE canonical NA NA 891 None 24 2 0 FALSE 0 0 NA A coding 325 975 19 993 PB.8976.2 chr17 - 1931 6 full-splice_match MFAP4 ENST00000395592.6 1932 6 2 -1 no_subtype FALSE canonical NA NA 148 None 3 6 0 FALSE 0 0 NA C coding 279 837 71 907 PB.10667.2 chr22 - 1458 4 novel_in_catalog GSTT2B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 178 None 2 4 0 FALSE 0 0 NA C coding 176 528 67 594 PB.10667.3 chr22 - 3152 2 genic GSTT2B novel NA NA NA NA no_subtype FALSE canonical NA NA 1012 None 4 23 1 TRUE 0 0 NA C coding 118 354 73 426 PB.10667.1 chr22 - 1106 5 full-splice_match GSTT2B ENST00000290765.8 1099 5 -11 4 no_subtype FALSE canonical NA NA 178 None 2 2 0 FALSE 0 0 NA C coding 244 732 67 798 PB.8952.3 chr17 - 3980 20 novel_not_in_catalog SREBF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 88 None 5 8 0 TRUE 0 0 NA B coding 1123 3369 70 3438 PB.8952.2 chr17 - 4138 20 novel_not_in_catalog SREBF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 243 None 7 9 1 TRUE 0 0 NA B coding 1147 3441 153 3593 PB.11125.2 chrX + 1582 5 full-splice_match UBE2A ENST00000628549.1 934 5 151 -799 no_subtype FALSE canonical NA NA 288 None 2 7 0 FALSE 0 0 NA C coding 119 357 58 414 PB.11125.3 chrX + 2691 4 novel_not_in_catalog UBE2A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1398 None 6 12 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.1899.5 chr2 + 1729 8 full-splice_match MFF ENST00000349901.11 1716 8 0 -13 no_subtype FALSE canonical NA NA 889 None 2 2 0 FALSE 0 0 NA C coding 238 714 305 1018 PB.4137.1 chr6 - 1814 7 full-splice_match VNN2 ENST00000326499.10 2118 7 298 6 no_subtype TRUE canonical NA NA 40 None 27 5 0 FALSE 0 0 NA A coding 282 846 542 1387 PB.8952.4 chr17 - 4377 21 novel_not_in_catalog SREBF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 260 None 3 14 0 TRUE 0 0 NA B coding 1116 3348 486 3833 PB.7056.8 chr12 + 2646 20 novel_in_catalog MARS novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2429 None 2 3 1 FALSE 0 0 NA C coding 855 2565 9 2573 PB.946.49 chr1 + 2853 16 incomplete-splice_match PTPRC ENST00000348564.10 4626 30 1494 279 internal_fragment FALSE canonical NA NA 1754 None 8 9 0 FALSE 0 0 NA B coding 568 1704 324 2027 PB.1483.1 chr2 + 2813 3 full-splice_match ITPRIPL1 ENST00000439118.2 1946 3 -45 -822 no_subtype FALSE canonical NA NA 306 None 23 5 0 FALSE 0 0 NA A coding 555 1665 297 1961 PB.6126.15 chr11 + 1431 13 incomplete-splice_match MUC2 ENST00000361558.7 12667 49 11224 12 internal_fragment FALSE canonical NA NA 1067 None 17 2 0 FALSE 0 0 NA B coding 378 1134 151 1284 PB.11078.3 chrX - 2690 13 novel_in_catalog TRMT2B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 124 None 4 10 0 FALSE 0 0 NA C coding 385 1155 314 1468 PB.2356.1 chr3 - 2863 2 antisense novelGene_BBX_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1209 None 7 44 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.5410.2 chr9 + 3152 3 full-splice_match ZNF189 ENST00000374861.7 3134 3 -26 8 no_subtype FALSE canonical NA NA 428 None 7 3 0 FALSE 0 0 NA C coding 612 1836 311 2146 PB.6405.1 chr11 + 4186 31 full-splice_match PLCB3 ENST00000279230.10 4197 31 7 4 no_subtype FALSE canonical NA NA 3621 None 27 5 0 FALSE 0 0 NA A coding 1234 3702 121 3822 PB.185.1 chr1 + 1894 16 novel_not_in_catalog SYTL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1683 None 4 1 0 TRUE 0 0 NA A coding 543 1629 188 1816 PB.9697.2 chr19 - 2656 20 novel_in_catalog SAFB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 251 None 2 3 1 FALSE 0 0 NA C coding 499 1497 917 2413 PB.1912.1 chr2 - 1440 6 antisense novelGene_ITM2C_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1237 None 2 12 2 FALSE 0 0 NA A coding 145 435 812 1246 PB.4916.5 chr8 - 3756 3 novel_in_catalog PCMTD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 98 None 2 39 0 FALSE 0 0 NA C coding 137 411 194 604 PB.9697.1 chr19 - 3100 21 full-splice_match SAFB2 ENST00000252542.8 3371 21 204 67 no_subtype FALSE canonical NA NA 247 None 18 2 0 FALSE 0 0 NA C coding 953 2859 62 2920 PB.9697.6 chr19 - 2960 9 novel_in_catalog SAFB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 247 None 4 3 0 FALSE 0 0 NA C coding 222 666 62 727 PB.9697.7 chr19 - 1587 11 incomplete-splice_match SAFB2 ENST00000252542.8 3371 21 177 1607 internal_fragment FALSE canonical NA NA 274 None 3 0 0 FALSE 0 0 NA C coding 499 1497 89 1585 PB.9697.4 chr19 - 1676 12 incomplete-splice_match SAFB2 ENST00000252542.8 3371 21 201 1494 internal_fragment FALSE canonical NA NA 250 None 2 0 0 FALSE 0 0 NA C coding 537 1611 65 1675 PB.9697.5 chr19 - 2529 10 novel_in_catalog SAFB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 247 None 3 5 0 FALSE 0 0 NA C coding 222 666 62 727 PB.7059.1 chr12 - 1689 15 novel_not_in_catalog DCTN2 novel NA NA NA NA no_subtype TRUE canonical NA NA 149 None 123 4 0 TRUE 0 0 NA A coding 401 1203 114 1316 PB.6763.1 chr12 + 1997 4 full-splice_match ITFG2 ENST00000541659.1 587 4 -113 -1297 no_subtype FALSE canonical NA NA 347 None 4 10 0 FALSE 0 0 NA A coding 147 441 114 554 PB.1649.8 chr2 - 2901 23 incomplete-splice_match PRPF40A ENST00000410080.5 8048 26 75 5072 internal_fragment FALSE canonical NA NA 551 None 2 4 0 FALSE 0 0 NA C coding 875 2625 276 2900 PB.2628.5 chr3 + 3126 20 novel_in_catalog PSMD2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2786 None 2 3 0 FALSE 0 0 NA C coding 484 1452 14 1465 PB.2628.4 chr3 + 2978 21 novel_not_in_catalog PSMD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2638 None 2 11 1 FALSE 0 0 NA C coding 569 1707 1112 2818 PB.804.1 chr1 - 1928 8 full-splice_match B4GALT3 ENST00000319769.9 1911 8 -21 4 no_subtype FALSE canonical NA NA 84 None 18 1 0 FALSE 0 0 NA C coding 393 1179 245 1423 PB.2628.1 chr3 + 1876 15 incomplete-splice_match PSMD2 ENST00000310118.8 3449 21 554 1019 3prime_fragment FALSE canonical NA NA 1808 None 12 0 0 FALSE 0 0 NA C coding 624 1872 5 1876 PB.2628.3 chr3 + 2876 21 novel_not_in_catalog PSMD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2536 None 2 9 0 TRUE 0 0 NA C coding 897 2691 26 2716 PB.2628.2 chr3 + 2885 21 full-splice_match PSMD2 ENST00000310118.8 3449 21 557 7 no_subtype FALSE canonical NA NA 2545 None 314 1 0 FALSE 0 0 NA C coding 908 2724 2 2725 PB.6622.1 chr11 + 2984 1 antisense novelGene_CWF19L2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7181.1 chr12 + 837 1 incomplete-splice_match TMPO ENST00000556029.5 4242 9 3371 35 no_subtype FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2368.1 chr3 + 2558 5 full-splice_match ABHD10 ENST00000273359.7 2590 5 25 7 no_subtype FALSE canonical NA NA 578 None 13 11 0 FALSE 0 0 NA A coding 306 918 3 920 PB.1959.2 chr2 + 3393 25 novel_not_in_catalog ANO7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2620 None 2 8 1 TRUE 0 0 NA B coding 862 2586 43 2628 PB.8904.2 chr17 + 1662 11 novel_not_in_catalog EIF4A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1007 None 2 13 2 FALSE 0 0 NA C coding 286 858 292 1149 PB.2645.2 chr3 - 1419 9 full-splice_match TRA2B ENST00000453386.6 2952 9 107 1426 no_subtype FALSE canonical NA NA 205 None 17 2 0 FALSE 0 0 NA C coding 288 864 170 1033 PB.8904.1 chr17 + 1753 11 full-splice_match EIF4A1 ENST00000293831.12 1756 11 2 1 no_subtype FALSE canonical NA NA 1090 None 60 4 0 FALSE 0 0 NA C coding 406 1218 15 1232 PB.9687.1 chr19 - 1434 11 full-splice_match UBXN6 ENST00000301281.10 1943 11 36 473 no_subtype FALSE canonical NA NA 172 None 22 4 0 FALSE 0 0 NA A coding 441 1323 90 1412 PB.11222.1 chrX + 2756 12 novel_not_in_catalog BRCC3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 911 None 41 9 1 TRUE 0 0 NA A coding 111 333 8 340 PB.8181.1 chr15 + 6361 2 genic_intron novelGene_649 novel NA NA NA NA no_subtype TRUE canonical NA NA 1669 None 7 35 0 FALSE 0 0 NA A coding 105 315 4413 4727 PB.4622.1 chr7 + 2668 7 full-splice_match TES ENST00000358204.8 2782 7 110 4 no_subtype FALSE canonical NA NA 1182 None 224 13 0 FALSE 0 0 NA C coding 421 1263 106 1368 PB.3813.9 chr6 - 3564 25 full-splice_match BAG6 ENST00000375976.8 3644 25 39 41 no_subtype FALSE canonical NA NA 108 None 17 23 2 FALSE 0 0 NA C coding 1126 3378 122 3499 PB.9545.1 chr18 - 3933 8 novel_not_in_catalog TPGS2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 148 None 2 14 0 TRUE 0 0 NA C coding 300 900 64 963 PB.4817.3 chr8 + 3865 28 full-splice_match XPO7 ENST00000433566.8 4519 28 0 654 no_subtype FALSE canonical NA NA 3228 None 14 3 0 FALSE 0 0 NA C coding 1088 3264 56 3319 PB.4817.1 chr8 + 3841 28 full-splice_match XPO7 ENST00000252512.13 4861 28 68 952 no_subtype FALSE canonical NA NA 3202 None 44 1 0 FALSE 0 0 NA C coding 1087 3261 33 3293 PB.10589.2 chr21 + 3162 12 novel_in_catalog RRP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2579 None 3 24 0 FALSE 0 0 NA C coding 365 1095 65 1159 PB.4817.5 chr8 + 3828 3 novel_not_in_catalog XPO7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3554 None 2 16 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.5711.1 chr10 + 2921 8 incomplete-splice_match KIAA1217 ENST00000376451.4 7383 15 1931 2531 internal_fragment FALSE canonical NA NA 2589 None 4 6 0 FALSE 0 0 NA A coding 901 2703 22 2724 PB.7800.1 chr14 - 3395 11 novel_not_in_catalog NUMB novel NA NA NA NA no_subtype TRUE non_canonical NA NA 94 None 2 6 1 FALSE 0 0 NA C coding 592 1776 260 2035 PB.9404.2 chr17 + 2763 17 novel_not_in_catalog TMC8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2233 None 87 5 0 TRUE 0 0 NA B coding 726 2178 332 2509 PB.9404.3 chr17 + 2769 17 novel_not_in_catalog TMC8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2244 None 5 6 1 TRUE 0 0 NA B coding 487 1461 378 1838 PB.4248.1 chr6 - 2662 8 novel_not_in_catalog SFT2D1 novel NA NA NA NA no_subtype FALSE canonical NA NA 139 None 3 17 1 TRUE 0 0 NA C coding 137 411 77 487 PB.7825.1 chr14 - 1885 1 antisense novelGene_JDP2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 4 0 FALSE 0 0 NA A coding 101 303 258 560 PB.1705.1 chr2 - 3535 5 full-splice_match SP3 ENST00000418194.6 3937 5 395 7 no_subtype FALSE canonical NA NA 64 None 19 1 0 FALSE 0 0 NA A coding 496 1488 641 2128 PB.2579.1 chr3 - 2574 1 genic_intron novelGene_1306 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A coding 120 360 1263 1622 PB.199.1 chr1 - 1462 1 incomplete-splice_match PTAFR ENST00000539896.1 4191 3 2711 19 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7457.1 chr13 + 3247 2 novel_not_in_catalog AKAP11 novel NA NA NA NA no_subtype FALSE canonical NA NA 300 None 2 37 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.199.5 chr1 - 1545 1 novel_in_catalog PTAFR novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 2 0 FALSE 0 0 NA B coding 342 1026 42 1067 PB.199.4 chr1 - 1762 3 novel_not_in_catalog PTAFR novel NA NA NA NA no_subtype FALSE canonical NA NA 84 None 56 3 1 TRUE 0 0 NA B coding 342 1026 123 1148 PB.536.1 chr1 + 2734 3 full-splice_match TMEM167B ENST00000338272.8 3730 3 987 9 no_subtype FALSE canonical NA NA 225 None 45 13 0 FALSE 0 0 NA C coding 27 81 305 385 PB.536.2 chr1 + 2721 1 novel_in_catalog TMEM167B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1755.1 chr2 + 4182 9 novel_not_in_catalog NAB1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1670 None 2 10 0 TRUE 0 0 NA A coding 487 1461 292 1752 PB.2360.1 chr3 - 1627 11 full-splice_match IFT57 ENST00000264538.3 3203 11 108 1468 no_subtype FALSE canonical NA NA 352 None 36 0 0 FALSE 0 0 NA C coding 429 1287 141 1427 PB.2360.2 chr3 - 2783 7 novel_not_in_catalog IFT57 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 266 None 7 15 1 TRUE 0 0 NA C coding 209 627 55 681 PB.1755.2 chr2 + 3631 2 genic_intron novelGene_1358 novel NA NA NA NA no_subtype FALSE canonical NA NA 573 None 2 23 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2703.1 chr4 - 4246 29 novel_not_in_catalog GAK novel NA NA NA NA no_subtype TRUE canonical NA NA 64 None 43 0 0 TRUE 0 0 NA B coding 1223 3669 184 3852 PB.2703.3 chr4 - 6189 28 novel_not_in_catalog GAK novel NA NA NA NA no_subtype TRUE non_canonical NA NA 254 None 2 16 2 TRUE 0 0 NA B coding 820 2460 3336 5795 PB.2703.2 chr4 - 4311 28 novel_not_in_catalog GAK novel NA NA NA NA no_subtype FALSE canonical NA NA 276 None 3 4 0 TRUE 0 0 NA B coding 1262 3786 132 3917 PB.4155.1 chr6 + 1762 1 genic HEBP2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1074.1 chr1 + 1506 5 full-splice_match CNIH4 ENST00000465271.5 4125 5 48 2571 no_subtype FALSE canonical NA NA 419 None 2 4 0 FALSE 0 0 NA A coding 139 417 28 444 PB.6773.1 chr12 + 2101 9 novel_in_catalog RAD51AP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 911 None 2 8 0 FALSE 0 0 NA A coding 265 795 251 1045 PB.7083.1 chr12 + 1628 1 genic_intron novelGene_610 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 5 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.211.10 chr1 - 2096 7 novel_in_catalog LAPTM5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 116 None 26 4 0 FALSE 0 0 NA C coding 192 576 163 738 PB.211.11 chr1 - 1583 1 genic_intron novelGene_297 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3106.2 chr4 - 3399 5 novel_not_in_catalog CTSO novel NA NA NA NA no_subtype FALSE canonical NA NA 1092 None 2 14 0 FALSE 0 0 NA C coding 139 417 1087 1503 PB.211.13 chr1 - 4649 2 novel_not_in_catalog LAPTM5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 301 None 2 18 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.5434.1 chr9 - 2065 2 full-splice_match C9orf152 ENST00000400613.4 2717 2 642 10 no_subtype FALSE canonical NA NA 161 None 3 15 1 FALSE 0 0 NA A coding 218 654 32 685 PB.5165.2 chr8 + 2033 12 full-splice_match GPAA1 ENST00000355091.8 2078 12 42 3 no_subtype FALSE canonical NA NA 1701 None 24 2 0 FALSE 0 0 NA C coding 621 1863 80 1942 PB.5048.9 chr8 - 2980 7 novel_in_catalog YWHAZ novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 70 None 5 10 0 FALSE 0 0 NA C coding 245 735 279 1013 PB.5913.1 chr10 + 2911 20 incomplete-splice_match BTAF1 ENST00000265990.10 7250 38 44 4295 3prime_fragment FALSE canonical NA NA 2691 None 12 1 0 FALSE 0 0 NA A coding 882 2646 265 2910 PB.3896.1 chr6 + 1758 6 novel_in_catalog RNF8 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1271 None 2 4 0 FALSE 0 0 NA A coding 412 1236 144 1379 PB.1129.1 chr1 + 1465 4 full-splice_match GGPS1 ENST00000282841.9 2895 4 3 1427 no_subtype FALSE canonical NA NA 370 None 11 3 0 FALSE 0 0 NA A coding 300 900 230 1129 PB.5182.2 chr8 - 3789 21 full-splice_match RECQL4 ENST00000617875.4 3809 21 17 3 no_subtype FALSE canonical NA NA 109 None 4 7 0 FALSE 0 0 NA C coding 1208 3624 26 3649 PB.5182.1 chr8 - 3796 21 novel_not_in_catalog RECQL4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 96 None 2 13 1 FALSE 0 0 NA C coding 1155 3465 13 3477 PB.3901.1 chr6 - 1969 6 full-splice_match GLO1 ENST00000373365.4 2012 6 14 29 no_subtype FALSE canonical NA NA 157 None 16 10 0 FALSE 0 0 NA A coding 184 552 74 625 PB.3114.1 chr4 - 2759 3 full-splice_match NPY1R ENST00000296533.2 3029 3 265 5 no_subtype FALSE canonical NA NA 116 None 4 8 0 FALSE 0 0 NA A coding 384 1152 268 1419 PB.9388.1 chr17 - 2937 1 genic ST6GALNAC2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 24 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6262.1 chr11 - 1548 3 full-splice_match CD59 ENST00000415002.6 1878 3 243 87 no_subtype FALSE canonical NA NA 89 None 29 8 0 FALSE 0 0 NA A coding 128 384 23 406 PB.10222.1 chr20 + 3150 7 full-splice_match PSMF1 ENST00000335877.10 4290 7 72 1068 no_subtype FALSE canonical NA NA 868 None 66 5 0 FALSE 0 0 NA A coding 271 813 105 917 PB.4237.2 chr6 - 1872 12 full-splice_match TCP1 ENST00000321394.11 2499 12 157 470 no_subtype FALSE canonical NA NA 188 None 51 0 0 FALSE 0 0 NA C coding 556 1668 125 1792 PB.800.10 chr1 - 4250 11 novel_in_catalog ARHGAP30 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 379 None 2 10 0 FALSE 0 0 NA C coding 953 2859 624 3482 PB.4473.5 chr7 + 2784 7 novel_not_in_catalog DTX2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2555 None 4 16 2 TRUE 0 0 NA B coding 319 957 398 1354 PB.10384.1 chr20 + 1831 1 genic_intron novelGene_410 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4129.1 chr6 + 3141 2 novel_not_in_catalog ENPP1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 21 None 2 30 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.4237.1 chr6 - 2752 2 antisense novelGene_ACAT2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1878 None 2 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2029.1 chr3 + 5588 3 genic_intron novelGene_130 novel NA NA NA NA no_subtype TRUE canonical NA NA 278 None 2 47 1 FALSE 0 0 NA A coding 101 303 4348 4650 PB.1632.1 chr2 - 6519 1 novel_in_catalog ZEB2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 22 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4916.1 chr8 - 3536 2 genic_intron novelGene_515 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3417 None 4 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3568.1 chr5 + 3351 1 full-splice_match CARMN ENST00000614517.1 5524 1 2166 7 no_subtype FALSE canonical NA NA NA None 4 24 0 FALSE 0 0 NA C coding 169 507 1431 1937 PB.5096.1 chr8 + 2703 3 genic_intron novelGene_1070 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1765 None 5 14 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.9077.1 chr17 + 1827 10 novel_not_in_catalog AATF novel NA NA NA NA no_subtype FALSE canonical NA NA 1609 None 2 3 1 FALSE 0 0 NA A coding 389 1167 140 1306 PB.6946.2 chr12 - 1656 12 full-splice_match PRKAG1 ENST00000548065.5 2071 12 408 7 no_subtype FALSE canonical NA NA 58 None 15 3 0 FALSE 0 0 NA C coding 331 993 50 1042 PB.9220.1 chr17 + 1396 4 novel_in_catalog NGFR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 694 None 2 5 0 FALSE 0 0 NA C coding 274 822 127 948 PB.9220.2 chr17 + 3420 6 full-splice_match NGFR ENST00000172229.7 3417 6 5 -8 no_subtype FALSE canonical NA NA 1102 None 58 10 0 FALSE 0 0 NA C coding 427 1281 121 1401 PB.1266.3 chr2 + 3556 19 novel_not_in_catalog TTC27 novel NA NA NA NA no_subtype FALSE canonical NA NA 2481 None 2 9 1 FALSE 0 0 NA B coding 470 1410 1192 2601 PB.10254.1 chr20 - 4197 17 novel_in_catalog SLC23A2 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical NA NA 93 None 2 13 1 FALSE 0 0 NA A coding 649 1947 374 2320 PB.5096.2 chr8 + 2711 3 genic_intron novelGene_1070 novel NA NA NA NA no_subtype FALSE canonical NA NA 1796 None 3 17 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.4410.12 chr7 + 2697 1 novel_in_catalog CCM2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 16 8 0 FALSE 0 0 NA C coding 105 315 200 514 PB.5130.2 chr8 + 1993 14 incomplete-splice_match PHF20L1 ENST00000395386.6 6237 21 -1 4245 3prime_fragment FALSE canonical NA NA 1936 None 2 1 0 FALSE 0 0 NA B coding 564 1692 301 1992 PB.4410.10 chr7 + 1442 2 novel_in_catalog CCM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 89 None 2 9 0 FALSE 0 0 NA C coding 113 339 890 1228 PB.8722.1 chr16 + 1722 7 novel_not_in_catalog IL34 novel NA NA NA NA no_subtype FALSE canonical NA NA 1037 None 4 4 0 FALSE 0 0 NA A coding 242 726 500 1225 PB.1941.2 chr2 - 2966 2 antisense novelGene_LRRFIP1_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 2545 None 7 17 1 FALSE 0 0 NA A coding 115 345 302 646 PB.1824.5 chr2 - 5513 2 genic_intron novelGene_1388 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 162 None 2 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6946.1 chr12 - 1557 11 full-splice_match PRKAG1 ENST00000547306.5 1531 11 -26 0 no_subtype FALSE canonical NA NA 59 None 4 9 2 FALSE 0 0 NA C coding 280 840 94 933 PB.9361.1 chr17 - 3024 17 full-splice_match GGA3 ENST00000537686.5 4069 17 209 836 no_subtype FALSE canonical NA NA 48 None 64 8 1 FALSE 0 0 NA A coding 723 2169 9 2177 PB.4493.6 chr7 - 1528 2 novel_in_catalog SRI novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 72 None 10 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8730.3 chr16 - 2976 1 incomplete-splice_match AP1G1 ENST00000299980.8 6969 23 3988 6 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3862.1 chr6 + 1941 1 genic UHRF1BP1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5355.1 chr9 + 1475 8 novel_in_catalog CTSL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1102 None 80 2 0 FALSE 0 0 NA A coding 333 999 201 1199 PB.8730.4 chr16 - 2948 8 novel_not_in_catalog AP1G1 novel NA NA NA NA no_subtype FALSE canonical NA NA 279 None 3 11 1 TRUE 0 0 NA C coding 247 741 1036 1776 PB.9714.1 chr19 + 1986 14 full-splice_match TRIP10 ENST00000313285.12 2035 14 24 25 no_subtype FALSE canonical NA NA 1547 None 7 4 0 FALSE 0 0 NA C coding 545 1635 59 1693 PB.6616.1 chr11 - 1306 9 full-splice_match CASP4 ENST00000444739.6 2158 9 840 12 no_subtype FALSE canonical NA NA 78 None 4 2 0 FALSE 0 0 NA A coding 377 1131 72 1202 PB.5435.1 chr9 + 2832 1 antisense novelGene_LPAR1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.276 chr14 - 1953 8 fusion IGHM,IGHV3-21 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 119 None 2 14 1 TRUE 0 0 NA A coding 486 1458 376 1833 PB.5045.2 chr8 - 2319 15 full-splice_match PABPC1 ENST00000318607.9 3485 15 780 386 no_subtype FALSE canonical NA NA 542 None 1075 3 0 FALSE 0 0 NA C coding 636 1908 350 2257 PB.9981.1 chr19 + 2813 10 novel_in_catalog PAK4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1837 None 12 11 0 FALSE 0 0 NA A coding 591 1773 218 1990 PB.3579.3 chr5 - 1485 9 full-splice_match CD74 ENST00000009530.11 981 9 0 -504 no_subtype FALSE canonical NA NA 127 None 261 8 1 FALSE 0 0 NA C coding 296 888 3 890 PB.11216.1 chrX - 3058 3 genic_intron novelGene_1257 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 886 None 2 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8665.1 chr16 + 2709 6 novel_not_in_catalog CBFB novel NA NA NA NA no_subtype FALSE canonical NA NA 365 None 2 11 0 TRUE 0 0 NA A coding 87 261 171 431 PB.2002.1 chr3 + 2748 2 genic_intron novelGene_92 novel NA NA NA NA no_subtype TRUE canonical NA NA 1612 None 2 25 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.11023.4 chrX + 2581 11 full-splice_match NONO ENST00000373841.5 2606 11 20 5 no_subtype FALSE canonical NA NA 1359 None 3 8 0 FALSE 0 0 NA C coding 471 1413 79 1491 PB.2641.1 chr3 - 3189 12 novel_not_in_catalog LIPH novel NA NA NA NA no_subtype TRUE canonical NA NA 184 None 5 19 1 TRUE 0 0 NA A coding 323 969 520 1488 PB.6833.2 chr12 + 1540 6 full-splice_match BCL2L14 ENST00000396367.5 1886 6 21 325 no_subtype FALSE canonical NA NA 1119 None 2 1 0 FALSE 0 0 NA C coding 327 981 175 1155 PB.6833.1 chr12 + 1532 6 full-splice_match BCL2L14 ENST00000308721.9 1897 6 39 326 no_subtype FALSE canonical NA NA 1112 None 8 1 0 FALSE 0 0 NA C coding 327 981 168 1148 PB.1118.2 chr1 + 3749 7 novel_not_in_catalog TSNAX novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1499 None 2 25 1 TRUE 0 0 NA C coding 168 504 142 645 PB.3579.6 chr5 - 2854 8 novel_in_catalog CD74 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 126 None 2 15 1 FALSE 0 0 NA C coding 279 837 2 838 PB.5974.5 chr10 + 4441 15 novel_in_catalog SEMA4G novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2133 None 5 6 0 FALSE 0 0 NA B coding 838 2514 444 2957 PB.707.14 chr1 - 6449 15 novel_not_in_catalog ADAR novel NA NA NA NA no_subtype FALSE non_canonical NA NA 92 None 2 23 0 TRUE 0 0 NA B coding 664 1992 1746 3737 PB.9886.1 chr19 + 1323 5 full-splice_match KXD1 ENST00000222307.8 1426 5 91 12 no_subtype FALSE canonical NA NA 358 None 10 8 1 FALSE 0 0 NA A coding 176 528 58 585 PB.3880.2 chr6 - 3723 12 novel_not_in_catalog C6orf222 novel NA NA NA NA no_subtype FALSE canonical NA NA 171 None 2 9 1 FALSE 0 0 NA B coding 651 1953 176 2128 PB.3880.3 chr6 - 3593 13 novel_not_in_catalog C6orf222 novel NA NA NA NA no_subtype FALSE canonical NA NA 38 None 2 10 1 TRUE 0 0 NA B coding 652 1956 43 1998 PB.3880.1 chr6 - 3734 13 novel_not_in_catalog C6orf222 novel NA NA NA NA no_subtype FALSE canonical NA NA 178 None 10 9 1 TRUE 0 0 NA B coding 652 1956 183 2138 PB.959.2 chr1 + 1444 1 novel_in_catalog TIMM17A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4833.4 chr8 + 1523 9 novel_in_catalog CHMP7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1174 None 4 5 0 FALSE 0 0 NA B coding 489 1467 55 1521 PB.4833.1 chr8 + 3370 11 novel_not_in_catalog CHMP7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1916 None 9 14 0 FALSE 0 0 NA B coding 453 1359 617 1975 PB.2285.1 chr3 - 3800 12 incomplete-splice_match LRIG1 ENST00000273261.7 5273 19 1471 2 5prime_fragment FALSE canonical NA NA 133 None 2 19 0 FALSE 0 0 NA A coding 665 1995 339 2333 PB.4833.2 chr8 + 3380 11 novel_not_in_catalog CHMP7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1926 None 2 14 1 TRUE 0 0 NA B coding 453 1359 627 1985 PB.1040.2 chr1 + 1567 4 incomplete-splice_match PPP2R5A ENST00000261461.6 3128 13 1555 6 internal_fragment FALSE canonical NA NA 347 None 2 2 0 FALSE 0 0 NA A coding 159 477 1 477 PB.3532.3 chr5 + 1670 2 novel_in_catalog TMCO6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 144 None 2 10 1 FALSE 0 0 NA C coding 119 357 60 416 PB.10200.2 chr19 + 2827 1 novel_in_catalog ZNF274 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA C coding 268 804 1615 2418 PB.10200.1 chr19 + 2449 8 full-splice_match ZNF274 ENST00000617501.4 2538 8 107 -18 no_subtype FALSE canonical NA NA 1050 None 5 3 0 FALSE 0 0 NA C coding 653 1959 72 2030 PB.2015.5 chr3 + 4214 17 novel_in_catalog FBLN2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3380 None 2 6 0 FALSE 0 0 NA C coding 1231 3693 43 3735 PB.2015.4 chr3 + 4078 16 novel_not_in_catalog FBLN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3288 None 4 12 1 TRUE 0 0 NA C coding 767 2301 43 2343 PB.2015.3 chr3 + 4180 20 novel_not_in_catalog FBLN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3342 None 3 20 4 TRUE 0 0 NA C coding 725 2175 96 2270 PB.2015.2 chr3 + 4131 17 full-splice_match FBLN2 ENST00000295760.11 4127 17 -27 23 no_subtype FALSE canonical NA NA 3293 None 27 6 0 FALSE 0 0 NA C coding 1184 3552 97 3648 PB.2015.1 chr3 + 3906 18 full-splice_match FBLN2 ENST00000404922.7 4318 18 24 388 no_subtype FALSE canonical NA NA 3433 None 31 2 0 FALSE 0 0 NA C coding 1231 3693 96 3788 PB.589.3 chr1 - 1675 1 novel_in_catalog BCAS2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 9 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2729.3 chr4 - 2525 14 novel_not_in_catalog JAKMIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 284 None 3 4 0 TRUE 0 0 NA A coding 626 1878 432 2309 PB.4027.1 chr6 + 2093 1 genic_intron novelGene_806 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3700.4 chr5 - 3119 4 novel_not_in_catalog MGAT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 158 None 25 9 1 TRUE 0 0 NA B coding 445 1335 714 2048 PB.490.1 chr1 + 1418 12 incomplete-splice_match MTF2 ENST00000370298.8 4125 15 45 2662 3prime_fragment FALSE canonical NA NA 1404 None 8 0 0 FALSE 0 0 NA C coding 391 1173 245 1417 PB.9824.10 chr19 + 2824 18 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2198 None 15 6 0 TRUE 0 0 NA C coding 715 2145 81 2225 PB.490.2 chr1 + 3229 15 full-splice_match MTF2 ENST00000370298.8 4125 15 54 842 no_subtype FALSE canonical NA NA 1659 None 6 9 0 FALSE 0 0 NA C coding 593 1779 236 2014 PB.490.4 chr1 + 3246 1 novel_in_catalog MTF2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 27 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6484.1 chr11 - 893 4 full-splice_match CDK2AP2 ENST00000301488.7 1378 4 469 16 no_subtype FALSE canonical NA NA 162 None 17 4 0 FALSE 0 0 NA C coding 126 378 81 458 PB.6484.2 chr11 - 1569 2 full-splice_match CDK2AP2 ENST00000526447.1 772 2 -86 -711 no_subtype FALSE canonical NA NA 571 None 2 4 0 FALSE 0 0 NA C coding 115 345 365 709 PB.1553.1 chr2 + 1621 6 novel_not_in_catalog IL1RN novel NA NA NA NA no_subtype FALSE canonical NA NA 1491 None 8 9 0 TRUE 0 0 NA B coding 143 429 62 490 PB.125.1 chr1 + 1003 3 full-splice_match C1QB ENST00000314933.6 1044 3 33 8 no_subtype FALSE canonical NA NA 286 None 18 1 0 FALSE 0 0 NA A coding 253 759 100 858 PB.1811.1 chr2 + 3477 4 novel_not_in_catalog CTLA4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2898 None 2 11 1 TRUE 0 0 NA A coding 177 531 77 607 PB.4495.1 chr7 - 2631 3 antisense novelGene_STEAP2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 750 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9824.13 chr19 + 2975 19 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2349 None 2 6 0 TRUE 0 0 NA C coding 761 2283 94 2376 PB.5974.7 chr10 + 4064 16 novel_not_in_catalog SEMA4G novel NA NA NA NA no_subtype FALSE canonical NA NA 1757 None 4 4 0 FALSE 0 0 NA B coding 839 2517 65 2581 PB.4256.1 chr6 + 2064 18 full-splice_match ERMARD ENST00000366773.7 2141 18 0 77 no_subtype FALSE canonical NA NA 1886 None 3 0 0 FALSE 0 0 NA A coding 677 2031 34 2064 PB.7078.2 chr12 - 2955 2 genic RP11-196H14.3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 27 None 7 18 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.4375.1 chr7 + 3536 1 genic_intron novelGene_363 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6823.1 chr12 - 1777 6 novel_not_in_catalog CLEC1A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 228 None 3 4 1 TRUE 0 0 NA A coding 271 813 114 926 PB.5365.2 chr9 - 2747 20 novel_in_catalog IARS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 123 None 4 6 0 FALSE 0 0 NA B coding 735 2205 131 2335 PB.3677.7 chr5 - 3171 3 novel_not_in_catalog DOK3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 45 None 2 27 2 TRUE 0 0 NA B coding 175 525 679 1203 PB.7299.2 chr12 + 2383 7 full-splice_match PRKAB1 ENST00000229328.9 2610 7 218 9 no_subtype FALSE canonical NA NA 1009 None 9 7 0 FALSE 0 0 NA C coding 270 810 275 1084 PB.8484.1 chr16 + 1343 4 full-splice_match LYRM1 ENST00000567954.5 460 4 2 -885 no_subtype FALSE canonical NA NA 341 None 3 9 0 FALSE 0 0 NA A coding 122 366 90 455 PB.7299.1 chr12 + 2620 6 novel_in_catalog PRKAB1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 943 None 4 8 0 FALSE 0 0 NA C coding 252 756 278 1033 PB.3031.1 chr4 + 2930 4 novel_not_in_catalog KIAA1109 novel NA NA NA NA no_subtype FALSE canonical NA NA 2824 None 2 26 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.10515.2 chr21 - 3473 19 incomplete-splice_match LTN1 ENST00000361371.9 7685 30 8 4204 internal_fragment FALSE canonical NA NA 114 None 2 4 0 FALSE 0 0 NA C coding 1133 3399 73 3471 PB.10515.3 chr21 - 1662 10 incomplete-splice_match LTN1 ENST00000389195.6 2714 13 72 980 internal_fragment FALSE canonical NA NA 114 None 12 0 0 FALSE 0 0 NA C coding 530 1590 73 1662 PB.6278.1 chr11 - 2997 1 genic_intron novelGene_353 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A coding 100 300 357 656 PB.10515.1 chr21 - 7660 30 full-splice_match LTN1 ENST00000361371.9 7685 30 22 3 no_subtype FALSE canonical NA NA 100 None 3 15 0 FALSE 0 0 NA C coding 1766 5298 59 5356 PB.9699.1 chr19 - 2836 5 novel_not_in_catalog C19orf70 novel NA NA NA NA no_subtype FALSE canonical NA NA 68 None 3 17 0 TRUE 0 0 NA A coding 118 354 40 393 PB.6064.1 chr10 + 1515 8 novel_in_catalog HTRA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 804 None 3 0 0 FALSE 0 0 NA A coding 167 501 470 970 PB.9240.1 chr17 - 3565 23 incomplete-splice_match SPAG9 ENST00000357122.8 4761 29 1178 18 5prime_fragment FALSE canonical NA NA 80 None 3 3 0 FALSE 0 0 NA A coding 969 2907 46 2952 PB.2830.1 chr4 + 701 1 full-splice_match RP11-100N21.1 ENST00000487352.1 616 1 -36 -49 no_subtype FALSE canonical NA NA NA None 7 1 0 FALSE 0 0 NA A coding 122 366 37 402 PB.6800.1 chr12 - 2229 11 full-splice_match C1R ENST00000542285.5 2660 11 145 286 no_subtype FALSE canonical NA NA 76 None 43 0 0 FALSE 0 0 NA A coding 705 2115 75 2189 PB.5925.3 chr10 + 3382 1 novel_in_catalog FFAR4 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 25 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2921.1 chr4 - 1705 12 full-splice_match HPSE ENST00000311412.9 4615 12 46 2864 no_subtype FALSE canonical NA NA 281 None 10 2 0 FALSE 0 0 NA A coding 543 1629 55 1683 PB.9218.1 chr17 - 1861 2 novel_not_in_catalog ZNF652 novel NA NA NA NA no_subtype TRUE canonical NA NA 749 None 6 8 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.143.2 chr1 - 1813 5 full-splice_match SRSF10 ENST00000484146.6 1089 5 -2 -722 no_subtype FALSE canonical NA NA 168 None 7 7 1 FALSE 0 0 NA C coding 165 495 104 598 PB.4493.5 chr7 - 1502 8 novel_not_in_catalog SRI novel NA NA NA NA no_subtype FALSE non_canonical NA NA 69 None 2 3 1 TRUE 0 0 NA C coding 106 318 286 603 PB.10168.3 chr19 + 3480 10 novel_not_in_catalog LILRA2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3302 None 2 16 1 TRUE 0 0 NA A coding 427 1281 38 1318 PB.10168.1 chr19 + 2812 10 novel_not_in_catalog LILRA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1423 None 3 11 2 TRUE 0 0 NA A coding 315 945 78 1022 PB.5612.3 chr9 + 1598 1 incomplete-splice_match RXRA ENST00000356384.4 5770 12 3676 497 no_subtype FALSE canonical NA NA NA None 10 10 0 FALSE 0 0 NA B coding 163 489 146 634 PB.5612.2 chr9 + 5916 3 novel_not_in_catalog RXRA novel NA NA NA NA no_subtype FALSE canonical NA NA 2295 None 2 45 0 TRUE 0 0 NA B coding 134 402 1061 1462 PB.5612.1 chr9 + 8678 3 novel_not_in_catalog RXRA novel NA NA NA NA no_subtype TRUE canonical NA NA 3902 None 2 71 1 TRUE 0 0 NA B coding 134 402 1577 1978 PB.10509.1 chr21 + 3847 10 full-splice_match JAM2 ENST00000480456.5 4337 10 480 10 no_subtype FALSE canonical NA NA 934 None 2 16 0 FALSE 0 0 NA A coding 298 894 71 964 PB.7712.1 chr14 + 3802 2 antisense novelGene_CNIH1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1233 None 2 25 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6942.1 chr12 - 3245 17 full-splice_match DDX23 ENST00000308025.7 3248 17 -2 5 no_subtype FALSE canonical NA NA 82 None 145 1 0 FALSE 0 0 NA C coding 820 2460 83 2542 PB.5818.3 chr10 - 3081 10 novel_not_in_catalog AIFM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 42 None 3 10 0 FALSE 0 0 NA C coding 373 1119 59 1177 PB.5818.2 chr10 - 3502 11 novel_not_in_catalog AIFM2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 402 None 4 12 1 TRUE 0 0 NA C coding 373 1119 480 1598 PB.5818.1 chr10 - 1363 9 full-splice_match AIFM2 ENST00000307864.2 3243 9 160 1720 no_subtype FALSE canonical NA NA 41 None 7 1 0 FALSE 0 0 NA C coding 373 1119 55 1173 PB.2083.2 chr3 + 2467 19 full-splice_match CNOT10 ENST00000328834.9 2815 19 190 158 no_subtype FALSE canonical NA NA 2206 None 12 4 0 FALSE 0 0 NA C coding 744 2232 127 2358 PB.1300.1 chr2 - 1247 10 full-splice_match HAAO ENST00000294973.10 1265 10 9 9 no_subtype FALSE canonical NA NA 127 None 2 2 0 FALSE 0 0 NA A coding 286 858 48 905 PB.2083.1 chr3 + 3010 22 novel_not_in_catalog CNOT10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2741 None 2 6 2 TRUE 0 0 NA C coding 744 2232 276 2507 PB.9167.4 chr17 - 2950 20 novel_not_in_catalog SLC4A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 73 None 2 4 0 TRUE 0 0 NA B coding 906 2718 142 2859 PB.9504.1 chr18 - 3033 11 novel_not_in_catalog ESCO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1005 None 2 3 0 TRUE 0 0 NA A coding 590 1770 226 1995 PB.10912.10 chrX + 1765 1 genic CYBB novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2806.1 chr4 - 1824 8 novel_not_in_catalog TMEM156 novel NA NA NA NA no_subtype FALSE canonical NA NA 184 None 8 6 0 TRUE 0 0 NA B coding 296 888 97 984 PB.10587.2 chr21 + 913 1 incomplete-splice_match RRP1B ENST00000470886.1 4634 5 3719 3 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4159.1 chr6 + 2809 1 genic_intron novelGene_1175 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2420.4 chr3 + 2749 8 novel_not_in_catalog CD86 novel NA NA NA NA no_subtype FALSE canonical NA NA 1049 None 5 13 0 TRUE 0 0 NA B coding 323 969 175 1143 PB.4959.2 chr8 - 3423 1 genic CPA6 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 27 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2420.2 chr3 + 2676 8 novel_not_in_catalog CD86 novel NA NA NA NA no_subtype FALSE canonical NA NA 980 None 3 12 0 TRUE 0 0 NA B coding 323 969 106 1074 PB.7900.1 chr14 + 1421 13 full-splice_match VRK1 ENST00000216639.7 1745 13 88 236 no_subtype FALSE canonical NA NA 1220 None 11 3 0 FALSE 0 0 NA A coding 396 1188 62 1249 PB.6703.26 chr11 + 1454 1 genic_intron novelGene_1061 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4759.2 chr7 - 3319 1 genic_intron novelGene_1244 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5534.2 chr9 + 1598 1 incomplete-splice_match SLC25A25 ENST00000373069.9 3376 11 1774 5 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C coding 103 309 292 600 PB.7312.8 chr12 + 2608 17 novel_not_in_catalog RNF10 novel NA NA NA NA no_subtype FALSE canonical NA NA 2319 None 7 2 0 TRUE 0 0 NA C coding 700 2100 62 2161 PB.7312.9 chr12 + 3133 17 full-splice_match RNF10 ENST00000325954.8 3825 17 5 687 no_subtype FALSE canonical NA NA 2815 None 77 5 0 FALSE 0 0 NA C coding 811 2433 457 2889 PB.7312.4 chr12 + 2814 17 novel_not_in_catalog RNF10 novel NA NA NA NA no_subtype FALSE canonical NA NA 2656 None 12 3 0 TRUE 0 0 NA C coding 786 2358 457 2814 PB.3158.1 chr5 + 2283 15 full-splice_match SDHA ENST00000264932.10 2390 15 83 24 no_subtype FALSE canonical NA NA 1940 None 18 0 0 FALSE 0 0 NA A coding 664 1992 33 2024 PB.7312.7 chr12 + 3040 18 novel_not_in_catalog RNF10 novel NA NA NA NA no_subtype FALSE canonical NA NA 2747 None 7 7 1 TRUE 0 0 NA C coding 711 2133 457 2589 PB.8327.1 chr15 + 2772 6 full-splice_match ASB7 ENST00000332783.11 4985 6 29 2184 no_subtype FALSE canonical NA NA 1573 None 5 14 0 FALSE 0 0 NA A coding 318 954 757 1710 PB.7772.4 chr14 - 1368 5 novel_in_catalog VTI1B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 258 None 2 5 0 FALSE 0 0 NA A coding 201 603 144 746 PB.7312.2 chr12 + 2884 19 novel_not_in_catalog RNF10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2593 None 2 5 0 TRUE 0 0 NA C coding 811 2433 235 2667 PB.5349.1 chr9 - 4573 28 novel_not_in_catalog AGTPBP1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 181 None 2 13 3 TRUE 0 0 NA A coding 1202 3606 215 3820 PB.5234.3 chr9 - 1541 10 novel_not_in_catalog PLIN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 72 None 4 2 1 TRUE 0 0 NA C coding 445 1335 95 1429 PB.5234.2 chr9 - 1601 10 novel_not_in_catalog PLIN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 100 None 2 2 1 TRUE 0 0 NA C coding 445 1335 123 1457 PB.5234.1 chr9 - 1734 11 novel_not_in_catalog PLIN2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 74 None 3 3 1 TRUE 0 0 NA C coding 445 1335 97 1431 PB.8764.1 chr16 + 3354 2 genic RP11-391L3.1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1468 None 7 20 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.3378.1 chr5 - 1292 1 full-splice_match NPM1P27 ENST00000502784.2 830 1 -145 -317 no_subtype FALSE canonical NA NA NA None 8 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5234.4 chr9 - 1950 8 full-splice_match PLIN2 ENST00000276914.6 1972 8 16 6 no_subtype FALSE canonical NA NA 142 None 10 8 0 FALSE 0 0 NA C coding 437 1311 165 1475 PB.10501.1 chr21 + 5481 27 novel_not_in_catalog ABCC13 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3734 None 2 21 0 FALSE 0 0 NA A coding 714 2142 1168 3309 PB.7772.2 chr14 - 1664 9 novel_not_in_catalog RDH11 novel NA NA NA NA no_subtype TRUE canonical NA NA 99 None 2 5 0 TRUE 0 0 NA A coding 318 954 26 979 PB.8132.1 chr15 + 2518 2 novel_in_catalog APH1B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 129 None 2 12 0 FALSE 0 0 NA C coding 146 438 633 1070 PB.4602.6 chr7 - 2795 20 novel_in_catalog SLC26A3 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 110 None 5 8 0 FALSE 0 0 NA C coding 738 2214 199 2412 PB.8132.2 chr15 + 4128 6 full-splice_match APH1B ENST00000261879.9 4189 6 56 5 no_subtype FALSE canonical NA NA 620 None 3 11 0 FALSE 0 0 NA C coding 257 771 15 785 PB.4274.1 chr7 - 3745 4 full-splice_match GNA12 ENST00000275364.7 4378 4 379 254 no_subtype FALSE canonical NA NA 93 None 2 28 0 FALSE 0 0 NA C coding 305 915 13 927 PB.4274.2 chr7 - 2814 1 incomplete-splice_match GNA12 ENST00000491117.5 3375 3 555 7 no_subtype FALSE canonical NA NA NA None 4 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.11024.3 chrX + 5626 34 novel_not_in_catalog TAF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 4750 None 3 4 0 FALSE 0 0 NA C coding 841 2523 2448 4970 PB.1824.2 chr2 - 2994 4 full-splice_match KLF7 ENST00000309446.10 8362 4 401 4967 no_subtype FALSE canonical NA NA 78 None 18 17 1 FALSE 0 0 NA C coding 5 15 868 882 PB.3164.1 chr5 - 5435 3 novel_not_in_catalog LPCAT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 538 None 9 47 0 TRUE 0 0 NA C coding 108 324 2898 3221 PB.5347.1 chr9 + 2650 13 full-splice_match NTRK2 ENST00000395882.5 7111 13 56 4405 no_subtype TRUE canonical NA NA 1890 None 9 7 0 FALSE 0 0 NA C coding 466 1398 528 1925 PB.9995.1 chr19 - 3418 6 novel_not_in_catalog ZNF780A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 63 None 2 7 1 FALSE 0 0 NA A coding 641 1923 178 2100 PB.1824.4 chr2 - 3444 2 novel_not_in_catalog KLF7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2390 None 3 15 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.4223.1 chr6 + 2907 2 novel_not_in_catalog TULP4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 791 None 18 18 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.9732.1 chr19 - 1430 6 novel_not_in_catalog CD320 novel NA NA NA NA no_subtype TRUE canonical NA NA 441 None 5 3 1 TRUE 0 0 NA A coding 353 1059 300 1358 PB.7364.1 chr12 + 3205 20 novel_not_in_catalog AACS novel NA NA NA NA no_subtype TRUE canonical NA NA 1977 None 52 11 1 TRUE 0 0 NA A coding 672 2016 97 2112 PB.4376.15 chr7 - 3538 7 genic_intron novelGene_360 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 534 None 2 22 4 FALSE 0 0 NA A coding 133 399 73 471 PB.6663.2 chr11 - 3956 6 full-splice_match MPZL3 ENST00000278949.8 3968 6 3 9 no_subtype FALSE canonical NA NA 126 None 9 23 0 FALSE 0 0 NA C coding 235 705 54 758 PB.9143.2 chr17 + 4186 19 full-splice_match WNK4 ENST00000246914.9 4001 19 -60 -125 no_subtype FALSE canonical NA NA 3810 None 3 4 0 FALSE 0 0 NA C coding 1243 3729 82 3810 PB.9143.3 chr17 + 3416 11 novel_in_catalog WNK4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2094 None 2 5 0 FALSE 0 0 NA C coding 738 2214 55 2268 PB.3816.1 chr6 + 907 7 full-splice_match CSNK2B ENST00000375882.6 948 7 37 4 no_subtype FALSE canonical NA NA 676 None 3 3 0 FALSE 0 0 NA A coding 215 645 120 764 PB.9143.1 chr17 + 3550 17 novel_not_in_catalog WNK4 novel NA NA NA NA no_subtype FALSE canonical NA NA 3517 None 2 1 0 FALSE 0 0 NA C coding 1153 3459 90 3548 PB.9347.1 chr17 - 5673 5 novel_not_in_catalog CD300C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 152 None 5 38 2 TRUE 0 0 NA B coding 191 573 158 730 PB.7486.1 chr13 + 1949 1 incomplete-splice_match FNDC3A ENST00000398316.7 5714 24 3762 4 no_subtype FALSE canonical NA NA NA None 12 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7954.2 chr14 - 2798 3 full-splice_match GPR132 ENST00000392585.2 2887 3 52 37 no_subtype FALSE canonical NA NA 15 None 22 11 0 FALSE 0 0 NA A coding 371 1113 123 1235 PB.1068.1 chr1 - 3160 6 novel_not_in_catalog TLR5 novel NA NA NA NA no_subtype FALSE canonical NA NA 53 None 2 4 1 TRUE 0 0 NA A coding 858 2574 441 3014 PB.10075.1 chr19 + 6343 6 full-splice_match ARHGAP35 ENST00000404338.7 8889 6 1960 586 no_subtype FALSE canonical NA NA 2182 None 2 34 0 FALSE 0 0 NA A coding 631 1893 645 2537 PB.3370.9 chr5 - 5929 8 novel_not_in_catalog MEF2C novel NA NA NA NA no_subtype TRUE canonical NA NA 443 None 3 22 1 TRUE 0 0 NA B coding 200 600 583 1182 PB.3370.4 chr5 - 2730 10 novel_in_catalog MEF2C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 228 None 25 6 0 FALSE 0 0 NA B coding 465 1395 368 1762 PB.9347.3 chr17 - 1402 4 novel_not_in_catalog CD300C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 380 None 4 2 1 TRUE 0 0 NA B coding 219 657 323 979 PB.252.1 chr1 + 3412 8 full-splice_match NCDN ENST00000356090.8 3433 8 11 10 no_subtype FALSE canonical NA NA 1869 None 23 6 0 FALSE 0 0 NA C coding 712 2136 168 2303 PB.3370.1 chr5 - 3469 10 novel_in_catalog MEF2C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 272 None 16 5 0 FALSE 0 0 NA B coding 433 1299 415 1713 PB.252.3 chr1 + 4149 7 novel_in_catalog NCDN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2605 None 2 12 0 FALSE 0 0 NA C coding 712 2136 904 3039 PB.252.2 chr1 + 3590 8 novel_not_in_catalog NCDN novel NA NA NA NA no_subtype FALSE canonical NA NA 2046 None 2 12 1 FALSE 0 0 NA C coding 712 2136 345 2480 PB.3515.2 chr5 - 2973 8 full-splice_match DNAJC18 ENST00000302060.9 5103 8 25 2105 no_subtype FALSE canonical NA NA 96 None 18 11 0 FALSE 0 0 NA C coding 358 1074 57 1130 PB.8542.2 chr16 + 1730 7 novel_not_in_catalog MVP novel NA NA NA NA no_subtype TRUE canonical NA NA 707 None 3 6 0 TRUE 0 0 NA B coding 320 960 36 995 PB.8542.3 chr16 + 2699 12 novel_not_in_catalog MVP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1909 None 3 6 1 TRUE 0 0 NA B coding 545 1635 36 1670 PB.8343.1 chr16 - 2788 3 genic_intron novelGene_6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1691 None 2 17 1 FALSE 0 0 NA A coding 115 345 648 992 PB.860.1 chr1 - 2826 20 full-splice_match KIFAP3 ENST00000361580.6 2957 20 111 20 no_subtype FALSE canonical NA NA 149 None 21 2 0 FALSE 0 0 NA C coding 792 2376 118 2493 PB.860.2 chr1 - 2970 21 novel_not_in_catalog KIFAP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 215 None 4 7 2 FALSE 0 0 NA C coding 772 2316 184 2499 PB.3183.1 chr5 + 1918 8 full-splice_match FAM105A ENST00000274217.3 3597 8 53 1626 no_subtype FALSE canonical NA NA 964 None 28 6 0 FALSE 0 0 NA A coding 356 1068 68 1135 PB.10682.1 chr22 - 1846 15 novel_not_in_catalog CHEK2 novel NA NA NA NA no_subtype TRUE canonical NA NA 70 None 3 4 0 FALSE 0 0 NA A coding 539 1617 77 1693 PB.4335.1 chr7 - 1676 12 novel_in_catalog HNRNPA2B1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 170 None 6 2 0 FALSE 0 0 NA C coding 341 1023 165 1187 PB.4335.2 chr7 - 1543 11 novel_in_catalog HNRNPA2B1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 175 None 4 2 0 FALSE 0 0 NA C coding 341 1023 170 1192 PB.4335.3 chr7 - 1621 12 novel_not_in_catalog HNRNPA2B1 novel NA NA NA NA no_subtype FALSE canonical NA NA 175 None 2 2 0 FALSE 0 0 NA C coding 341 1023 170 1192 PB.4335.4 chr7 - 2859 11 novel_in_catalog HNRNPA2B1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 172 None 29 5 0 FALSE 0 0 NA C coding 341 1023 167 1189 PB.4335.5 chr7 - 1709 11 full-splice_match HNRNPA2B1 ENST00000356674.7 1711 11 -8 10 no_subtype FALSE canonical NA NA 183 None 215 3 1 FALSE 0 0 NA C coding 341 1023 178 1200 PB.3346.2 chr5 - 2867 2 antisense novelGene_PAPD4_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1630 None 2 39 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.3346.1 chr5 - 2887 3 antisense novelGene_PAPD4_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1605 None 2 32 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.224.1 chr1 - 2677 2 antisense novelGene_KPNA6_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 339 None 7 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7962.2 chr15 + 2528 8 full-splice_match NIPA2 ENST00000337451.7 3233 8 35 670 no_subtype FALSE canonical NA NA 1026 None 10 14 0 FALSE 0 0 NA C coding 360 1080 579 1658 PB.7962.1 chr15 + 2011 7 novel_in_catalog NIPA2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 918 None 2 6 0 FALSE 0 0 NA C coding 360 1080 471 1550 PB.119.1 chr1 + 2083 6 novel_in_catalog CDC42 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 569 None 20 12 0 FALSE 0 0 NA B coding 191 573 84 656 PB.7471.20 chr13 - 1844 3 novel_in_catalog LCP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 98 None 2 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.119.3 chr1 + 2050 5 novel_in_catalog CDC42 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 538 None 15 11 0 FALSE 0 0 NA B coding 191 573 53 625 PB.119.2 chr1 + 2751 2 novel_in_catalog CDC42 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 34 None 2 21 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.119.5 chr1 + 1432 1 incomplete-splice_match CDC42 ENST00000344548.7 2256 7 819 6 no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.119.4 chr1 + 2737 2 novel_not_in_catalog CDC42 novel NA NA NA NA no_subtype FALSE canonical NA NA 440 None 6 14 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.3923.1 chr6 - 1365 2 novel_not_in_catalog TBCC novel NA NA NA NA no_subtype FALSE canonical NA NA 1225 None 28 1 0 FALSE 0 0 NA A coding 346 1038 18 1055 PB.8685.1 chr16 + 3484 3 full-splice_match PSKH1 ENST00000291041.5 3481 3 -9 6 no_subtype FALSE canonical NA NA 1136 None 42 8 0 FALSE 0 0 NA A coding 424 1272 180 1451 PB.7330.1 chr12 - 3537 12 novel_in_catalog KDM2B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 165 None 6 4 0 FALSE 0 0 NA A coding 776 2328 112 2439 PB.6880.1 chr12 + 3928 13 novel_in_catalog STK38L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1281 None 10 9 0 FALSE 0 0 NA B coding 462 1386 21 1406 PB.2957.1 chr4 + 4205 8 novel_not_in_catalog MMRN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3353 None 14 6 1 FALSE 0 0 NA A coding 1047 3141 82 3222 PB.6880.3 chr12 + 4077 16 novel_not_in_catalog STK38L novel NA NA NA NA no_subtype FALSE canonical NA NA 1430 None 3 12 1 TRUE 0 0 NA B coding 462 1386 170 1555 PB.6880.2 chr12 + 4229 15 novel_not_in_catalog STK38L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1472 None 4 9 0 FALSE 0 0 NA B coding 462 1386 212 1597 PB.10563.1 chr21 + 1540 3 novel_not_in_catalog KCNJ15 novel NA NA NA NA no_subtype FALSE canonical NA NA 143 None 3 0 0 FALSE 0 0 NA A coding 375 1125 162 1286 PB.7070.2 chr12 + 3161 21 full-splice_match USP15 ENST00000353364.7 14950 21 56 11733 no_subtype FALSE canonical NA NA 2697 None 27 0 0 FALSE 0 0 NA C coding 952 2856 22 2877 PB.7070.1 chr12 + 3220 22 full-splice_match USP15 ENST00000280377.9 4748 22 52 1476 no_subtype FALSE canonical NA NA 2769 None 53 2 0 FALSE 0 0 NA C coding 981 2943 7 2949 PB.7070.5 chr12 + 3190 23 novel_not_in_catalog USP15 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2725 None 6 3 1 TRUE 0 0 NA C coding 966 2898 8 2905 PB.7070.4 chr12 + 2467 3 full-splice_match USP15 ENST00000551206.5 1022 3 -3 -1442 no_subtype FALSE canonical NA NA 228 None 2 16 0 FALSE 0 0 NA C coding 122 366 12 377 PB.11087.2 chrX - 2785 6 novel_not_in_catalog ARMCX2 novel NA NA NA NA no_subtype FALSE canonical NA NA 20 None 4 3 2 FALSE 0 0 NA B coding 632 1896 487 2382 PB.3740.1 chr6 + 3466 1 incomplete-splice_match TMEM170B ENST00000379426.1 8362 3 4887 10 no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10487.2 chr20 + 2768 7 novel_not_in_catalog ZGPAT novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2409 None 14 12 1 TRUE 0 0 NA C coding 318 954 109 1062 PB.10281.1 chr20 - 1882 2 antisense novelGene_SNRPB2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 37 None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10416.1 chr20 + 1834 15 full-splice_match CTSA ENST00000372484.7 2149 15 311 4 no_subtype FALSE canonical NA NA 1384 None 229 4 0 FALSE 0 0 NA C coding 480 1440 26 1465 PB.10416.3 chr20 + 1858 15 full-splice_match CTSA ENST00000191018.9 1898 15 35 5 no_subtype FALSE canonical NA NA 1409 None 4 3 0 FALSE 0 0 NA C coding 480 1440 51 1490 PB.9972.4 chr19 + 4522 1 genic_intron novelGene_380 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 42 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2198.3 chr3 + 2791 2 antisense novelGene_GMPPB_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 522 None 2 6 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3946.3 chr6 + 1128 7 incomplete-splice_match HSP90AB1 ENST00000371646.9 2572 12 14 1430 3prime_fragment FALSE canonical NA NA 1052 None 4 3 0 FALSE 0 0 NA C coding 344 1032 96 1127 PB.2198.1 chr3 + 4254 40 novel_not_in_catalog RNF123 novel NA NA NA NA no_subtype TRUE canonical NA NA 3914 None 17 6 1 TRUE 0 0 NA A coding 1314 3942 91 4032 PB.1926.4 chr2 + 3499 17 novel_not_in_catalog ATG16L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2091 None 2 10 0 TRUE 0 0 NA B coding 451 1353 146 1498 PB.10300.2 chr20 - 3854 11 novel_not_in_catalog NAPB novel NA NA NA NA no_subtype FALSE canonical NA NA 137 None 2 22 1 FALSE 0 0 NA C coding 185 555 456 1010 PB.6593.1 chr11 + 1822 3 full-splice_match ANKRD49 ENST00000544612.5 2268 3 358 88 no_subtype FALSE canonical NA NA 397 None 3 6 0 FALSE 0 0 NA C coding 239 717 140 856 PB.10652.1 chr22 + 4271 21 full-splice_match LZTR1 ENST00000215739.12 4572 21 291 10 no_subtype FALSE canonical NA NA 2474 None 19 21 0 FALSE 0 0 NA A coding 840 2520 69 2588 PB.5557.1 chr9 - 1914 11 full-splice_match SH3GLB2 ENST00000372564.7 2982 11 63 1005 no_subtype FALSE canonical NA NA 146 None 3 4 0 FALSE 0 0 NA A coding 395 1185 84 1268 PB.593.1 chr1 + 3453 1 antisense novelGene_SIKE1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4757.3 chr7 + 1871 10 novel_not_in_catalog NUB1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1403 None 9 3 0 TRUE 0 0 NA B coding 267 801 90 890 PB.3136.1 chr4 - 1241 9 full-splice_match AGA ENST00000264595.6 2107 9 66 800 no_subtype FALSE canonical NA NA 189 None 3 0 0 FALSE 0 0 NA A coding 346 1038 63 1100 PB.4016.1 chr6 + 2901 10 novel_not_in_catalog CYB5R4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2701 None 3 26 2 TRUE 0 0 NA C coding 234 702 94 795 PB.3946.4 chr6 + 2530 12 novel_not_in_catalog HSP90AB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2138 None 3 7 1 FALSE 0 0 NA C coding 724 2172 74 2245 PB.10965.3 chrX - 3212 10 full-splice_match TFE3 ENST00000493583.5 3279 10 60 7 no_subtype FALSE canonical NA NA 240 None 13 4 0 FALSE 0 0 NA C coding 470 1410 375 1784 PB.10965.2 chrX - 3433 10 full-splice_match TFE3 ENST00000315869.7 3415 10 -23 5 no_subtype FALSE canonical NA NA 399 None 52 7 0 FALSE 0 0 NA C coding 575 1725 284 2008 PB.7205.3 chr12 + 3718 17 novel_not_in_catalog TXNRD1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1790 None 4 22 3 TRUE 0 0 NA C coding 497 1491 360 1850 PB.7205.2 chr12 + 3531 17 novel_not_in_catalog TXNRD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1600 None 3 25 4 TRUE 0 0 NA C coding 497 1491 170 1660 PB.7205.5 chr12 + 3440 14 novel_in_catalog TXNRD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1512 None 7 15 1 FALSE 0 0 NA C coding 497 1491 82 1572 PB.7205.4 chr12 + 3492 15 novel_not_in_catalog TXNRD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1570 None 2 16 1 TRUE 0 0 NA C coding 497 1491 140 1630 PB.7205.7 chr12 + 3484 14 incomplete-splice_match TXNRD1 ENST00000525566.5 3836 17 349 3 internal_fragment FALSE canonical NA NA 1556 None 33 15 0 FALSE 0 0 NA C coding 497 1491 126 1616 PB.270.2 chr1 - 2680 6 novel_not_in_catalog C1orf109 novel NA NA NA NA no_subtype FALSE canonical NA NA 30 None 5 13 1 TRUE 0 0 NA A coding 203 609 524 1132 PB.359.3 chr1 + 1480 1 incomplete-splice_match RNF11 ENST00000242719.3 3084 3 1248 357 no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.359.1 chr1 + 2648 3 full-splice_match RNF11 ENST00000242719.3 3084 3 82 354 no_subtype FALSE canonical NA NA 697 None 36 8 0 FALSE 0 0 NA C coding 154 462 405 866 PB.8624.1 chr16 + 2687 22 full-splice_match NUP93 ENST00000308159.9 2741 22 47 7 no_subtype FALSE canonical NA NA 2423 None 33 2 1 FALSE 0 0 NA A coding 819 2457 75 2531 PB.2059.2 chr3 - 4001 2 genic_intron novelGene_250 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3172 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3946.9 chr6 + 1502 6 novel_in_catalog HSP90AB1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1110 None 2 3 0 FALSE 0 0 NA C coding 362 1086 132 1217 PB.1768.1 chr2 - 3662 1 novel_in_catalog ANKRD44 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 10 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7771.2 chr14 + 2688 3 genic_intron novelGene_636 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1383 None 2 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3808.1 chr6 + 1665 4 full-splice_match TNF ENST00000449264.2 1676 4 1 10 no_subtype FALSE canonical NA NA 454 None 5 4 0 FALSE 0 0 NA A coding 233 699 175 873 PB.7678.1 chr14 + 2823 15 novel_not_in_catalog PRPF39 novel NA NA NA NA no_subtype FALSE canonical NA NA 2088 None 32 7 0 TRUE 0 0 NA B coding 669 2007 136 2142 PB.9973.2 chr19 - 1389 5 full-splice_match LGALS4 ENST00000595278.5 1345 5 -64 20 no_subtype FALSE canonical NA NA 104 None 2 7 0 FALSE 0 0 NA C coding 171 513 60 572 PB.9973.1 chr19 - 1114 10 full-splice_match LGALS4 ENST00000307751.8 1535 10 419 2 no_subtype FALSE canonical NA NA 104 None 7 0 0 FALSE 0 0 NA C coding 323 969 60 1028 PB.7678.2 chr14 + 3078 16 novel_in_catalog PRPF39 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2336 None 3 13 0 FALSE 0 0 NA B coding 548 1644 747 2390 PB.2246.1 chr3 - 2786 15 novel_in_catalog NEK4 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 276 None 2 8 0 FALSE 0 0 NA B coding 795 2385 184 2568 PB.7678.4 chr14 + 3598 14 novel_in_catalog PRPF39 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2858 None 2 21 0 FALSE 0 0 NA B coding 273 819 2094 2912 PB.2246.2 chr3 - 2862 13 novel_in_catalog NEK4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 293 None 2 3 0 FALSE 0 0 NA B coding 745 2235 201 2435 PB.5260.4 chr9 - 4095 7 novel_not_in_catalog B4GALT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 45 None 6 23 0 TRUE 0 0 NA C coding 398 1194 92 1285 PB.5844.2 chr10 - 1347 5 novel_not_in_catalog MRPS16 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 45 None 4 14 1 TRUE 0 0 NA B coding 137 411 129 539 PB.5844.3 chr10 - 1539 5 novel_not_in_catalog MRPS16 novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 3 17 2 TRUE 0 0 NA B coding 137 411 91 501 PB.10448.1 chr20 - 2768 6 full-splice_match ZFP64 ENST00000216923.4 3264 6 209 287 no_subtype FALSE canonical NA NA 187 None 15 10 1 FALSE 0 0 NA A coding 681 2043 142 2184 PB.5260.1 chr9 - 3624 6 full-splice_match B4GALT1 ENST00000379731.4 4201 6 559 18 no_subtype FALSE canonical NA NA 40 None 16 22 0 FALSE 0 0 NA C coding 258 774 49 822 PB.5260.2 chr9 - 2113 1 incomplete-splice_match B4GALT1 ENST00000379731.4 4201 6 2081 8 no_subtype FALSE canonical NA NA NA None 5 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7289.1 chr12 - 3120 2 genic_intron novelGene_1029 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1284 None 4 21 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.7155.3 chr12 - 1664 3 novel_not_in_catalog BTG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 188 None 7 7 0 TRUE 0 0 NA B coding 171 513 198 710 PB.1940.3 chr2 + 4172 7 novel_in_catalog LRRFIP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 809 None 3 19 0 FALSE 0 0 NA C coding 273 819 231 1049 PB.6297.3 chr11 - 2858 19 novel_in_catalog PHF21A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 291 None 6 5 1 FALSE 0 0 NA A coding 681 2043 528 2570 PB.10428.3 chr20 - 3762 22 full-splice_match ZMYND8 ENST00000360911.7 4991 22 -22 1251 no_subtype FALSE canonical NA NA 72 None 8 2 0 FALSE 0 0 NA C coding 1135 3405 59 3463 PB.10428.1 chr20 - 3886 22 novel_in_catalog ZMYND8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 106 None 3 12 1 FALSE 0 0 NA C coding 1187 3561 25 3585 PB.10971.1 chrX - 5608 42 novel_not_in_catalog CACNA1F novel NA NA NA NA no_subtype TRUE non_canonical NA NA 192 None 2 16 2 TRUE 0 0 NA B coding 432 1296 2989 4284 PB.10971.2 chrX - 1411 11 novel_not_in_catalog CACNA1F novel NA NA NA NA no_subtype FALSE canonical NA NA 142 None 2 2 0 TRUE 0 0 NA B coding 326 978 312 1289 PB.10428.4 chr20 - 5715 2 novel_not_in_catalog ZMYND8 novel NA NA NA NA no_subtype FALSE canonical NA NA 1730 None 2 35 1 TRUE 0 0 NA C coding 134 402 4357 4758 PB.10295.1 chr20 + 3381 30 full-splice_match XRN2 ENST00000377191.4 3437 30 54 2 no_subtype FALSE canonical NA NA 2828 None 66 3 0 FALSE 0 0 NA C coding 950 2850 42 2891 PB.10295.3 chr20 + 2995 27 novel_in_catalog XRN2 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical NA NA 2476 None 2 5 0 FALSE 0 0 NA C coding 784 2352 188 2539 PB.3084.1 chr4 + 2964 2 antisense novelGene_LRBA_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1430 None 2 19 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3872.1 chr6 + 686 6 full-splice_match RPL10A ENST00000322203.6 716 6 20 10 no_subtype FALSE canonical NA NA 490 None 3 0 0 FALSE 0 0 NA A coding 217 651 8 658 PB.10295.4 chr20 + 3610 31 novel_not_in_catalog XRN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3064 None 3 5 0 TRUE 0 0 NA C coding 896 2688 440 3127 PB.2874.1 chr4 + 3143 1 novel_in_catalog CXCL8 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6981.1 chr12 + 3136 10 novel_not_in_catalog ACVR1B novel NA NA NA NA no_subtype TRUE canonical NA NA 1433 None 45 7 0 TRUE 0 0 NA A coding 505 1515 42 1556 PB.5777.1 chr10 + 2688 2 genic_intron novelGene_498 novel NA NA NA NA no_subtype FALSE canonical NA NA 1006 None 5 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9538.1 chr18 - 4404 8 novel_not_in_catalog RPRD1A novel NA NA NA NA no_subtype FALSE canonical NA NA 298 None 7 14 0 TRUE 0 0 NA B coding 312 936 148 1083 PB.9538.2 chr18 - 2230 6 novel_in_catalog RPRD1A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 293 None 2 7 0 FALSE 0 0 NA B coding 270 810 143 952 PB.3297.1 chr5 + 1444 9 incomplete-splice_match SREK1 ENST00000334121.10 6781 12 117 5220 3prime_fragment FALSE canonical NA NA 1163 None 15 2 0 FALSE 0 0 NA B coding 467 1401 43 1443 PB.3297.2 chr5 + 1680 10 incomplete-splice_match SREK1 ENST00000334121.10 6781 12 11 5090 3prime_fragment FALSE canonical NA NA 1632 None 6 1 0 FALSE 0 0 NA B coding 510 1530 149 1678 PB.3297.3 chr5 + 2820 8 novel_not_in_catalog SREK1 novel NA NA NA NA no_subtype TRUE canonical NA NA 875 None 2 8 0 TRUE 0 0 NA B coding 71 213 810 1022 PB.10604.5 chr21 - 2732 16 novel_not_in_catalog ITGB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 8 None 2 4 0 FALSE 0 0 NA C coding 769 2307 12 2318 PB.10290.6 chr20 + 2728 1 genic_intron novelGene_189 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8490.1 chr16 + 1587 14 full-splice_match UQCRC2 ENST00000268379.8 2615 14 720 308 no_subtype FALSE canonical NA NA 1322 None 86 2 0 FALSE 0 0 NA C coding 453 1359 45 1403 PB.8490.2 chr16 + 1530 1 novel_in_catalog UQCRC2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8490.3 chr16 + 1514 3 novel_not_in_catalog UQCRC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 697 None 2 7 1 TRUE 0 0 NA C coding 148 444 70 513 PB.7051.6 chr12 - 3385 23 novel_not_in_catalog STAT6 novel NA NA NA NA no_subtype TRUE canonical NA NA 86 None 37 5 0 TRUE 0 0 NA B coding 847 2541 108 2648 PB.3479.1 chr5 + 1514 1 antisense novelGene_SKP1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1873.1 chr2 + 1407 8 full-splice_match STK16 ENST00000409638.7 2868 8 27 1434 no_subtype FALSE canonical NA NA 924 None 10 3 0 FALSE 0 0 NA A coding 305 915 146 1060 PB.626.1 chr1 + 2759 5 antisense novelGene_LIX1L_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1126 None 2 18 4 FALSE 0 0 NA A non_coding NA NA NA NA PB.2708.2 chr4 + 2740 17 novel_not_in_catalog TACC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2523 None 18 10 2 TRUE 0 0 NA C coding 255 765 1822 2586 PB.7748.2 chr14 - 2082 1 genic_intron novelGene_593 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4237.3 chr6 - 2863 10 novel_in_catalog TCP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 195 None 4 13 0 FALSE 0 0 NA C coding 283 849 132 980 PB.5268.1 chr9 - 1433 8 fusion RPP25L,DCTN3 novel NA NA NA NA no_subtype FALSE canonical NA NA 113 None 2 1 0 FALSE 0 0 NA A coding 186 558 18 575 PB.5268.2 chr9 - 3824 5 novel_in_catalog DCTN3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 113 None 2 15 0 FALSE 0 0 NA A coding 172 516 18 533 PB.7783.1 chr14 + 3260 10 novel_not_in_catalog EXD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1790 None 11 5 0 TRUE 0 0 NA B coding 621 1863 142 2004 PB.8331.1 chr15 - 2624 1 incomplete-splice_match CHSY1 ENST00000254190.3 4550 3 1824 103 no_subtype FALSE canonical NA NA NA None 7 12 0 FALSE 0 0 NA A coding 340 1020 40 1059 PB.7241.2 chr12 - 3493 21 novel_not_in_catalog GIT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 129 None 8 4 0 TRUE 0 0 NA C coding 759 2277 78 2354 PB.607.3 chr1 + 2580 1 genic FAM46C novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 21 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7959.179 chr14 - 1465 8 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 56 None 2 11 4 TRUE 0 0 NA B coding 196 588 743 1330 PB.607.1 chr1 + 1985 2 full-splice_match FAM46C ENST00000369448.3 5751 2 115 3651 no_subtype FALSE canonical NA NA 105 None 91 1 0 FALSE 0 0 NA C coding 391 1173 133 1305 PB.4990.1 chr8 - 4385 9 novel_not_in_catalog PAG1 novel NA NA NA NA no_subtype FALSE canonical NA NA 478 None 2 38 2 FALSE 0 0 NA C coding 432 1296 723 2018 PB.2160.5 chr3 - 3782 21 novel_in_catalog SCAP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 64 None 4 1 0 FALSE 0 0 NA B coding 1048 3144 503 3646 PB.5839.3 chr10 + 3224 2 novel_not_in_catalog MCU novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3194 None 2 22 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.7400.3 chr13 - 3261 5 full-splice_match RNF6 ENST00000346166.7 3282 5 0 21 no_subtype FALSE canonical NA NA 61 None 11 7 0 FALSE 0 0 NA C coding 685 2055 163 2217 PB.4990.7 chr8 - 1570 1 genic_intron novelGene_749 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7400.1 chr13 - 3028 5 full-splice_match RNF6 ENST00000381588.8 3706 5 179 499 no_subtype FALSE canonical NA NA 312 None 36 4 1 FALSE 0 0 NA C coding 685 2055 414 2468 PB.834.1 chr1 + 3821 6 full-splice_match POGK ENST00000367876.8 5754 6 52 1881 no_subtype FALSE canonical NA NA 1942 None 18 6 0 FALSE 0 0 NA A coding 609 1827 99 1925 PB.10154.3 chr19 + 3024 4 novel_not_in_catalog ZNF766 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 782 None 2 30 1 TRUE 0 0 NA B coding 137 411 8 418 PB.9928.1 chr19 - 4102 4 full-splice_match ZNF792 ENST00000404801.1 3888 4 -217 3 no_subtype FALSE canonical NA NA 637 None 3 11 0 FALSE 0 0 NA A coding 632 1896 605 2500 PB.11145.1 chrX - 2910 2 genic TENM1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1956 None 9 19 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.5508.1 chr9 + 3290 18 novel_in_catalog GAPVD1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 3278 None 3 0 0 FALSE 0 0 NA B coding 992 2976 314 3289 PB.7241.6 chr12 - 2755 20 full-splice_match GIT2 ENST00000355312.7 5466 20 -116 2827 no_subtype FALSE canonical NA NA 168 None 2 1 0 FALSE 0 0 NA C coding 759 2277 117 2393 PB.8277.3 chr15 + 5980 2 novel_not_in_catalog ISG20 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2775 None 6 28 0 TRUE 0 0 NA C coding 108 324 3795 4118 PB.8277.2 chr15 + 1548 4 full-splice_match ISG20 ENST00000306072.9 1856 4 305 3 no_subtype FALSE canonical NA NA 482 None 25 6 1 FALSE 0 0 NA C coding 181 543 54 596 PB.8277.1 chr15 + 1634 2 novel_in_catalog ISG20 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 31 None 11 12 1 FALSE 0 0 NA C coding 169 507 56 562 PB.10486.1 chr20 + 1858 2 novel_in_catalog TNFRSF6B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 508 None 4 8 0 FALSE 0 0 NA A coding 211 633 85 717 PB.6398.1 chr11 - 1217 1 antisense novelGene_RTN3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1166.3 chr1 - 2758 2 novel_in_catalog SH3BP5L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 70 None 6 33 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7899.5 chr14 + 4373 21 novel_in_catalog PAPOLA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2213 None 2 23 2 FALSE 0 0 NA C coding 495 1485 822 2306 PB.7959.173 chr14 - 1577 11 fusion IGHG1,IGHV3-7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 122 None 2 27 6 TRUE 0 0 NA B coding 196 588 855 1442 PB.10997.1 chrX + 1454 1 full-splice_match MAGEH1 ENST00000342972.2 1462 1 -8 16 no_subtype FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA C coding 219 657 279 935 PB.648.1 chr1 - 3224 1 antisense novelGene_VPS45_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5155.1 chr8 + 2619 2 full-splice_match ZNF623 ENST00000526926.5 2612 2 -6 -1 no_subtype FALSE canonical NA NA 139 None 6 9 0 FALSE 0 0 NA C coding 496 1488 235 1722 PB.379.1 chr1 + 1717 8 full-splice_match LRRC42 ENST00000319223.8 1727 8 6 4 no_subtype FALSE canonical NA NA 1217 None 13 1 0 FALSE 0 0 NA A coding 428 1284 206 1489 PB.4986.1 chr8 - 3277 1 full-splice_match THAP12P7 ENST00000520248.1 2290 1 -84 -903 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C coding 623 1869 285 2153 PB.4986.2 chr8 + 1919 1 antisense novelGene_IL7_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 11 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9510.1 chr18 + 3245 20 novel_not_in_catalog RBBP8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2905 None 2 7 0 TRUE 0 0 NA A coding 897 2691 310 3000 PB.697.1 chr1 - 2010 4 full-splice_match SLC39A1 ENST00000356205.8 2084 4 56 18 no_subtype FALSE canonical NA NA 22 None 55 4 0 FALSE 0 0 NA A coding 324 972 55 1026 PB.7959.170 chr14 - 1553 12 fusion IGHV1-24,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 104 None 2 10 6 TRUE 0 0 NA B coding 196 588 831 1418 PB.3986.1 chr6 + 2761 1 genic OGFRL1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11188.1 chrX - 3512 11 full-splice_match CD99L2 ENST00000370377.7 3604 11 85 7 no_subtype FALSE canonical NA NA 100 None 31 13 0 FALSE 0 0 NA A coding 262 786 34 819 PB.7899.1 chr14 + 4476 22 full-splice_match PAPOLA ENST00000216277.12 4519 22 44 -1 no_subtype FALSE canonical NA NA 2318 None 49 8 0 FALSE 0 0 NA C coding 745 2235 177 2411 PB.3587.11 chr5 - 2806 19 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 119 None 3 10 0 TRUE 0 0 NA B coding 623 1869 156 2024 PB.7899.3 chr14 + 4311 20 novel_in_catalog PAPOLA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2152 None 8 9 0 FALSE 0 0 NA C coding 699 2097 149 2245 PB.7119.1 chr12 - 1064 8 novel_not_in_catalog TSPAN8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 177 None 18 7 1 TRUE 0 0 NA B coding 171 513 315 827 PB.9920.2 chr19 + 3016 20 novel_not_in_catalog GPATCH1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2741 None 2 6 0 FALSE 0 0 NA C coding 622 1866 11 1876 PB.9920.1 chr19 + 3048 20 full-splice_match GPATCH1 ENST00000170564.6 3492 20 306 138 no_subtype FALSE canonical NA NA 2773 None 16 1 0 FALSE 0 0 NA C coding 931 2793 9 2801 PB.7119.2 chr12 - 1442 7 novel_not_in_catalog TSPAN8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 177 None 2 10 1 TRUE 0 0 NA B coding 176 528 315 842 PB.3714.1 chr6 + 3120 12 novel_not_in_catalog RIPK1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2144 None 3 7 1 TRUE 0 0 NA A coding 671 2013 416 2428 PB.1200.5 chr2 - 3240 1 genic_intron novelGene_146 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 11 0 FALSE 0 0 NA A coding 113 339 539 877 PB.10055.2 chr19 - 1536 1 antisense novelGene_BLOC1S3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10727.1 chr22 + 2495 17 full-splice_match MCM5 ENST00000216122.8 3534 17 104 935 no_subtype FALSE canonical NA NA 2153 None 19 3 0 FALSE 0 0 NA A coding 734 2202 51 2252 PB.9900.2 chr19 + 6596 2 genic_intron novelGene_180 novel NA NA NA NA no_subtype FALSE canonical NA NA 713 None 5 33 1 FALSE 0 0 NA A coding 185 555 1847 2401 PB.10481.2 chr20 + 3104 14 novel_not_in_catalog ARFGAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1822 None 2 20 0 TRUE 0 0 NA B coding 343 1029 184 1212 PB.7147.2 chr12 - 2419 3 full-splice_match DUSP6 ENST00000279488.7 4400 3 774 1207 no_subtype TRUE canonical NA NA 858 None 148 9 0 FALSE 0 0 NA C coding 368 1104 498 1601 PB.9298.2 chr17 - 3023 6 novel_not_in_catalog ICAM2 novel NA NA NA NA no_subtype TRUE canonical NA NA 65 None 2 13 1 TRUE 0 0 NA C coding 275 825 110 934 PB.2881.1 chr4 + 3907 25 novel_not_in_catalog USO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2909 None 41 2 0 TRUE 0 0 NA B coding 962 2886 111 2996 PB.2881.2 chr4 + 2010 17 incomplete-splice_match USO1 ENST00000514213.6 4034 24 113 1911 3prime_fragment TRUE canonical NA NA 1978 None 6 1 0 FALSE 0 0 NA B coding 632 1896 115 2010 PB.1644.1 chr2 + 3163 26 novel_not_in_catalog RIF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3086 None 2 8 1 FALSE 0 0 NA A coding 601 1803 128 1930 PB.1946.2 chr2 - 4043 23 novel_not_in_catalog PER2 novel NA NA NA NA no_subtype FALSE canonical NA NA 138 None 5 9 1 FALSE 0 0 NA A coding 1255 3765 158 3922 PB.847.1 chr1 + 3248 20 full-splice_match DCAF6 ENST00000367843.7 3302 20 51 3 no_subtype FALSE canonical NA NA 2778 None 15 3 0 FALSE 0 0 NA C coding 880 2640 201 2840 PB.903.2 chr1 - 1363 7 full-splice_match GLUL ENST00000331872.10 4364 7 416 2585 no_subtype FALSE canonical NA NA 112 None 1388 1 0 FALSE 0 0 NA C coding 373 1119 126 1244 PB.7881.3 chr14 - 2129 1 genic_intron novelGene_855 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.371.1 chr1 + 2434 10 full-splice_match PRPF38A ENST00000257181.9 5274 10 178 2662 no_subtype FALSE canonical NA NA 904 None 16 16 0 FALSE 0 0 NA A coding 312 936 9 944 PB.5676.4 chr10 - 2028 1 genic_intron novelGene_86 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 26 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7273.1 chr12 + 2560 7 novel_in_catalog OAS3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1431 None 21 3 0 FALSE 0 0 NA B coding 596 1788 58 1845 PB.5855.1 chr10 + 5274 22 novel_not_in_catalog VCL novel NA NA NA NA no_subtype FALSE canonical NA NA 3146 None 7 12 0 TRUE 0 0 NA B coding 1066 3198 93 3290 PB.3216.18 chr5 - 3947 3 novel_not_in_catalog FYB novel NA NA NA NA no_subtype TRUE canonical NA NA 698 None 2 23 1 TRUE 0 0 NA B coding 104 312 1468 1779 PB.7273.4 chr12 + 6574 17 novel_not_in_catalog OAS3 novel NA NA NA NA no_subtype FALSE canonical NA NA 3293 None 76 13 0 TRUE 0 0 NA B coding 1087 3261 42 3302 PB.3216.14 chr5 - 2539 7 novel_not_in_catalog FYB novel NA NA NA NA no_subtype FALSE canonical NA NA 121 None 5 4 0 TRUE 0 0 NA B coding 472 1416 149 1564 PB.7959.121 chr14 - 1540 8 fusion IGHA1,IGHV3-43 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 128 None 2 15 4 TRUE 0 0 NA A coding 471 1413 83 1495 PB.5367.2 chr9 - 2685 7 full-splice_match OGN ENST00000375561.9 2743 7 45 13 no_subtype FALSE canonical NA NA 73 None 10 14 0 FALSE 0 0 NA A coding 298 894 149 1042 PB.3216.11 chr5 + 6438 5 antisense novelGene_FYB_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 6318 None 2 46 1 FALSE 0 0 NA B coding 127 381 5939 6319 PB.3216.10 chr5 + 2951 2 antisense novelGene_FYB_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 835 None 3 16 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.3216.12 chr5 - 1542 7 novel_not_in_catalog FYB novel NA NA NA NA no_subtype FALSE canonical NA NA 121 None 56 0 0 TRUE 0 0 NA B coding 464 1392 149 1540 PB.928.3 chr1 - 6734 47 incomplete-splice_match TPR ENST00000367478.8 9708 51 795 2179 5prime_fragment FALSE canonical NA NA 33 None 2 0 0 FALSE 0 0 NA C coding 2124 6372 220 6591 PB.1919.3 chr2 + 3247 1 genic_intron novelGene_1411 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1919.1 chr2 + 3094 24 novel_not_in_catalog DIS3L2 novel NA NA NA NA no_subtype TRUE canonical NA NA 2588 None 17 5 0 TRUE 0 0 NA A coding 885 2655 93 2747 PB.2870.1 chr4 + 2948 1 incomplete-splice_match SLC4A4 ENST00000425175.5 7596 25 4639 10 no_subtype FALSE canonical NA NA NA None 7 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6130.4 chr11 + 5708 13 novel_not_in_catalog LSP1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2942 None 4 24 2 TRUE 0 0 NA C coding 339 1017 51 1067 PB.1534.1 chr2 + 2910 7 incomplete-splice_match GCC2 ENST00000309863.10 7537 23 664 3963 3prime_fragment FALSE canonical NA NA 2837 None 15 3 0 FALSE 0 0 NA B coding 953 2859 51 2909 PB.6130.1 chr11 + 1529 11 full-splice_match LSP1 ENST00000311604.7 1699 11 162 8 no_subtype FALSE canonical NA NA 1046 None 572 5 0 FALSE 0 0 NA C coding 339 1017 14 1030 PB.5141.1 chr8 + 3069 3 genic_intron novelGene_1190 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 317 None 2 24 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6130.3 chr11 + 1427 13 novel_not_in_catalog LSP1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 947 None 2 8 4 TRUE 0 0 NA C coding 123 369 888 1256 PB.6130.2 chr11 + 1363 10 novel_in_catalog LSP1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 881 None 119 4 0 FALSE 0 0 NA C coding 284 852 14 865 PB.365.2 chr1 - 1944 1 full-splice_match KTI12 ENST00000371614.1 1714 1 12 -242 no_subtype FALSE canonical NA NA NA None 10 9 0 FALSE 0 0 NA A coding 354 1062 44 1105 PB.7010.3 chr12 + 2731 4 novel_in_catalog COPZ1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1365 None 2 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.365.1 chr1 - 1405 7 full-splice_match TXNDC12 ENST00000371626.8 2396 7 980 11 no_subtype FALSE canonical NA NA 192 None 30 5 0 FALSE 0 0 NA A coding 172 516 96 611 PB.10988.1 chrX + 1512 1 genic_intron novelGene_528 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3621.6 chr5 - 1459 1 genic_intron novelGene_1272 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3621.4 chr5 - 3583 2 genic_intron novelGene_1269 novel NA NA NA NA no_subtype TRUE canonical NA NA 3489 None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8073.1 chr15 - 3827 13 full-splice_match COPS2 ENST00000299259.10 2036 13 80 -1871 no_subtype FALSE canonical NA NA 57 None 2 22 1 FALSE 0 0 NA C coding 450 1350 4 1353 PB.3621.1 chr5 - 2671 16 full-splice_match EBF1 ENST00000313708.10 5250 16 -188 2767 no_subtype TRUE canonical NA NA 605 None 6 10 0 FALSE 0 0 NA A coding 591 1773 472 2244 PB.8073.2 chr15 - 1955 13 full-splice_match COPS2 ENST00000388901.9 6628 13 59 4614 no_subtype FALSE canonical NA NA 69 None 10 1 0 FALSE 0 0 NA C coding 443 1329 16 1344 PB.973.1 chr1 + 2652 7 novel_in_catalog TMEM183A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1968 None 2 7 0 FALSE 0 0 NA C coding 198 594 164 757 PB.973.2 chr1 + 1540 8 full-splice_match TMEM183A ENST00000367242.3 3019 8 10 1469 no_subtype FALSE canonical NA NA 1015 None 73 1 0 FALSE 0 0 NA C coding 376 1128 71 1198 PB.6412.12 chr11 - 2014 12 novel_in_catalog SF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 169 None 2 2 1 FALSE 0 0 NA C coding 524 1572 408 1979 PB.7799.1 chr14 + 5840 28 novel_not_in_catalog PAPLN novel NA NA NA NA no_subtype FALSE canonical NA NA 3714 None 6 12 0 TRUE 0 0 NA A coding 1271 3813 69 3881 PB.10175.1 chr19 + 1361 6 full-splice_match CCDC106 ENST00000308964.7 1546 6 177 8 no_subtype FALSE canonical NA NA 637 None 4 3 0 FALSE 0 0 NA A coding 280 840 112 951 PB.422.1 chr1 - 5960 12 full-splice_match SLC35D1 ENST00000235345.5 6162 12 149 53 no_subtype FALSE canonical NA NA 140 None 2 30 0 FALSE 0 0 NA C coding 325 975 28 1002 PB.629.8 chr1 - 3004 7 novel_in_catalog TXNIP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 561 None 2 31 3 FALSE 0 0 NA C coding 366 1098 312 1409 PB.10753.1 chr22 - 6033 16 novel_not_in_catalog PLA2G6 novel NA NA NA NA no_subtype FALSE canonical NA NA 81 None 2 32 0 TRUE 0 0 NA A coding 352 1056 4317 5372 PB.5056.1 chr8 + 1822 13 full-splice_match ATP6V1C1 ENST00000518738.1 2130 13 25 283 no_subtype FALSE canonical NA NA 1191 None 12 2 0 FALSE 0 0 NA C coding 382 1146 139 1284 PB.7478.2 chr13 - 2129 11 full-splice_match SUCLA2 ENST00000378654.8 2192 11 61 2 no_subtype FALSE canonical NA NA 114 None 17 4 0 FALSE 0 0 NA C coding 463 1389 25 1413 PB.2118.1 chr3 - 3814 4 antisense novelGene_TRAK1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 26 None 3 11 1 FALSE 0 0 NA A coding 134 402 2109 2510 PB.6785.2 chr12 - 2548 2 novel_not_in_catalog LPAR5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2062 None 4 8 0 TRUE 0 0 NA A coding 372 1116 219 1334 PB.1647.1 chr2 - 1447 6 full-splice_match ARL5A ENST00000295087.12 5326 6 58 3821 no_subtype FALSE canonical NA NA 300 None 63 3 0 FALSE 0 0 NA A coding 179 537 255 791 PB.1911.2 chr2 + 1888 7 novel_not_in_catalog ITM2C novel NA NA NA NA no_subtype TRUE canonical NA NA 651 None 302 6 0 TRUE 0 0 NA B coding 205 615 126 740 PB.1911.1 chr2 + 1879 6 novel_in_catalog ITM2C novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 643 None 2 11 1 FALSE 0 0 NA B coding 203 609 124 732 PB.521.1 chr1 + 1745 11 full-splice_match SLC30A7 ENST00000357650.8 1281 11 -139 -325 no_subtype FALSE canonical NA NA 1231 None 19 3 0 FALSE 0 0 NA C coding 376 1128 149 1276 PB.6350.10 chr11 + 3112 1 novel_in_catalog MS4A1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7737.1 chr14 - 1533 5 full-splice_match L3HYPDH ENST00000247194.8 1527 5 15 -21 no_subtype FALSE canonical NA NA 607 None 2 6 0 FALSE 0 0 NA A coding 354 1062 100 1161 PB.2030.1 chr3 - 1935 9 full-splice_match SH3BP5 ENST00000383791.7 2822 9 67 820 no_subtype FALSE canonical NA NA 292 None 105 1 0 FALSE 0 0 NA C coding 455 1365 155 1519 PB.7026.1 chr12 + 3233 5 novel_in_catalog RAB5B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 627 None 126 9 0 FALSE 0 0 NA A coding 215 645 96 740 PB.3042.1 chr4 - 2711 24 novel_not_in_catalog SCLT1 novel NA NA NA NA no_subtype TRUE canonical NA NA 435 None 6 2 0 TRUE 0 0 NA A coding 688 2064 402 2465 PB.1611.1 chr2 + 3557 6 full-splice_match HNMT ENST00000280097.4 3295 6 170 -432 no_subtype FALSE canonical NA NA 535 None 27 29 0 FALSE 0 0 NA C coding 292 876 13 888 PB.6559.1 chr11 - 1617 13 full-splice_match ALG8 ENST00000299626.9 1675 13 50 8 no_subtype FALSE canonical NA NA 117 None 4 0 0 FALSE 0 0 NA A coding 526 1578 23 1600 PB.1776.7 chr2 - 5647 2 genic ANKRD44-IT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 4991 None 2 31 0 TRUE 0 0 NA A coding 101 303 4166 4468 PB.1963.2 chr2 - 2099 12 full-splice_match STK25 ENST00000403346.7 2210 12 103 8 no_subtype FALSE canonical NA NA 81 None 5 4 0 FALSE 0 0 NA C coding 426 1278 182 1459 PB.963.1 chr1 - 1653 7 full-splice_match ARL8A ENST00000272217.6 1793 7 106 34 no_subtype FALSE canonical NA NA 186 None 12 5 0 FALSE 0 0 NA A coding 186 558 64 621 PB.8398.3 chr16 + 2745 3 novel_not_in_catalog ZNF263 novel NA NA NA NA no_subtype FALSE canonical NA NA 689 None 9 6 0 TRUE 0 0 NA C coding 226 678 300 977 PB.8398.2 chr16 + 3209 6 full-splice_match ZNF263 ENST00000219069.5 3830 6 612 9 no_subtype FALSE canonical NA NA 1150 None 13 5 0 FALSE 0 0 NA C coding 683 2049 265 2313 PB.8398.1 chr16 + 2760 2 full-splice_match ZNF263 ENST00000574253.1 1139 2 -12 -1609 no_subtype FALSE canonical NA NA 708 None 2 13 0 FALSE 0 0 NA C coding 226 678 322 999 PB.8416.2 chr16 - 2066 6 novel_not_in_catalog CDIP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 97 None 12 14 1 TRUE 0 0 NA C coding 208 624 199 822 PB.8398.6 chr16 + 2743 2 novel_not_in_catalog ZNF263 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 649 None 2 10 1 TRUE 0 0 NA C coding 238 714 266 979 PB.8398.5 chr16 + 2951 4 novel_in_catalog ZNF263 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 896 None 5 5 0 FALSE 0 0 NA C coding 598 1794 266 2059 PB.8416.1 chr16 - 2103 6 full-splice_match CDIP1 ENST00000563332.6 2774 6 39 632 no_subtype FALSE canonical NA NA 107 None 32 7 0 FALSE 0 0 NA C coding 208 624 212 835 PB.7959.147 chr14 - 1502 10 fusion IGHV4-61,IGHG1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 11 3 TRUE 0 0 NA A coding 196 588 779 1366 PB.5936.2 chr10 + 3547 6 novel_in_catalog ZNF518A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 650 None 2 12 0 FALSE 0 0 NA B coding 923 2769 777 3545 PB.7959.145 chr14 - 3024 12 fusion IGHV4-59,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 94 None 2 26 5 TRUE 0 0 NA A coding 265 795 816 1610 PB.7959.142 chr14 - 3034 12 fusion IGHV4-31,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 90 None 2 29 4 TRUE 0 0 NA A coding 265 795 826 1620 PB.10100.6 chr19 + 1645 10 novel_not_in_catalog SNRNP70 novel NA NA NA NA no_subtype FALSE canonical NA NA 865 None 3 2 0 FALSE 0 0 NA B coding 428 1284 201 1484 PB.3613.6 chr5 + 7366 4 novel_in_catalog ITK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 439 None 3 36 0 FALSE 0 0 NA C coding 168 504 115 618 PB.7959.141 chr14 - 3075 7 novel_not_in_catalog IGHG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 496 None 11 20 1 TRUE 0 0 NA B coding 265 795 863 1657 PB.1688.2 chr2 + 1491 1 antisense novelGene_TLK1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA B coding 101 303 81 383 PB.9407.1 chr17 - 2723 2 full-splice_match SOCS3 ENST00000330871.3 2734 2 0 11 no_subtype FALSE canonical NA NA 328 None 8 11 0 FALSE 0 0 NA A coding 214 642 450 1091 PB.561.1 chr1 - 2718 9 novel_not_in_catalog DRAM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 198 None 2 14 2 FALSE 0 0 NA B coding 230 690 277 966 PB.1194.2 chr2 + 3033 3 full-splice_match TRIB2 ENST00000155926.8 4391 3 1349 9 no_subtype FALSE canonical NA NA 633 None 25 7 0 FALSE 0 0 NA C coding 343 1029 71 1099 PB.2977.3 chr4 - 6470 13 novel_not_in_catalog PPP3CA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 69 None 2 36 0 TRUE 0 0 NA C coding 465 1395 509 1903 PB.1194.1 chr2 + 4104 4 novel_not_in_catalog TRIB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1700 None 10 12 0 TRUE 0 0 NA C coding 207 621 1546 2166 PB.7450.1 chr13 - 1304 7 novel_not_in_catalog MRPS31 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 196 None 6 2 0 FALSE 0 0 NA B coding 388 1164 72 1235 PB.9854.1 chr19 + 622 1 antisense novelGene_CTC-429P9.3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7450.2 chr13 - 2843 7 novel_not_in_catalog MRPS31 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1738 None 12 15 0 FALSE 0 0 NA B coding 347 1041 1737 2777 PB.7450.4 chr13 - 2723 1 genic MRPS31 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 20 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3588.1 chr5 - 2427 26 full-splice_match ANXA6 ENST00000354546.9 2593 26 158 8 no_subtype FALSE canonical NA NA 45 None 54 4 0 FALSE 0 0 NA A coding 673 2019 71 2089 PB.3785.35 chr6 - 1720 1 genic_intron novelGene_236 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A coding 100 300 1062 1361 PB.5167.4 chr8 - 1329 9 novel_not_in_catalog SHARPIN novel NA NA NA NA no_subtype FALSE canonical NA NA 205 None 3 7 1 FALSE 0 0 NA B coding 264 792 378 1169 PB.9058.5 chr17 - 1523 8 novel_not_in_catalog RFFL novel NA NA NA NA no_subtype FALSE canonical NA NA 140 None 2 3 1 TRUE 0 0 NA B coding 363 1089 149 1237 PB.2037.1 chr3 + 1856 9 full-splice_match OXNAD1 ENST00000285083.9 3929 9 -21 2094 no_subtype FALSE canonical NA NA 1270 None 5 9 0 FALSE 0 0 NA A coding 312 936 487 1422 PB.9058.1 chr17 - 4074 7 novel_not_in_catalog RFFL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 170 None 2 22 1 TRUE 0 0 NA B coding 355 1065 179 1243 PB.5167.3 chr8 - 1531 7 novel_not_in_catalog SHARPIN novel NA NA NA NA no_subtype FALSE non_canonical NA NA 201 None 2 13 2 TRUE 0 0 NA B coding 159 477 1 477 PB.4156.1 chr6 - 1788 1 incomplete-splice_match NHSL1 ENST00000427025.6 7500 7 5704 9 no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2573.3 chr3 + 3491 1 incomplete-splice_match SEC62 ENST00000337002.8 6568 8 1155 1923 no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5056.2 chr8 + 5494 15 novel_not_in_catalog ATP6V1C1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4073 None 5 19 2 TRUE 0 0 NA C coding 382 1146 146 1291 PB.11074.2 chrX - 3735 18 novel_not_in_catalog SYTL4 novel NA NA NA NA no_subtype FALSE canonical NA NA 117 None 2 11 0 TRUE 0 0 NA B coding 671 2013 188 2200 PB.4188.1 chr6 + 3254 5 incomplete-splice_match TAB2 ENST00000538427.5 4240 7 984 2 internal_fragment FALSE canonical NA NA 1221 None 7 12 0 FALSE 0 0 NA A coding 452 1356 6 1361 PB.7644.1 chr14 - 1529 4 novel_in_catalog GZMB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 85 None 7 1 0 FALSE 0 0 NA B coding 219 657 31 687 PB.3603.1 chr5 + 2350 1 genic_intron novelGene_1258 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 16 0 FALSE 0 0 NA B coding 134 402 1149 1550 PB.721.1 chr1 - 1715 11 novel_not_in_catalog GBAP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 141 None 7 9 2 FALSE 0 0 NA A coding 263 789 583 1371 PB.4035.2 chr6 - 2823 17 full-splice_match MAP3K7 ENST00000369329.7 4911 17 -40 2128 no_subtype TRUE canonical NA NA 322 None 4 3 0 FALSE 0 0 NA C coding 606 1818 203 2020 PB.4035.1 chr6 - 2704 16 full-splice_match MAP3K7 ENST00000369332.7 4830 16 -6 2132 no_subtype FALSE canonical NA NA 288 None 20 8 0 FALSE 0 0 NA C coding 579 1737 169 1905 PB.5177.1 chr8 - 1537 9 novel_in_catalog VPS28 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 28 None 2 2 0 FALSE 0 0 NA A coding 115 345 1012 1356 PB.10670.2 chr22 + 6206 18 novel_not_in_catalog SPECC1L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3496 None 2 30 3 TRUE 0 0 NA C coding 1117 3351 233 3583 PB.7727.1 chr14 + 2828 16 full-splice_match TMEM260 ENST00000261556.10 4264 16 1 1435 no_subtype TRUE canonical NA NA 1990 None 3 3 0 FALSE 0 0 NA A coding 707 2121 122 2242 PB.10670.1 chr22 + 6127 16 full-splice_match SPECC1L ENST00000437398.5 6674 16 52 495 no_subtype FALSE canonical NA NA 3416 None 17 15 0 FALSE 0 0 NA C coding 1117 3351 153 3503 PB.4488.1 chr7 - 1220 5 full-splice_match TMEM243 ENST00000433078.5 1273 5 49 4 no_subtype FALSE canonical NA NA 178 None 2 8 0 FALSE 0 0 NA A coding 5 15 346 360 PB.1820.1 chr2 - 2518 19 full-splice_match NDUFS1 ENST00000233190.10 11819 19 159 9142 no_subtype FALSE canonical NA NA 104 None 11 2 0 FALSE 0 0 NA A coding 727 2181 109 2289 PB.7588.1 chr13 + 3754 3 full-splice_match CHAMP1 ENST00000361283.2 3795 3 32 9 no_subtype FALSE canonical NA NA 222 None 26 12 0 FALSE 0 0 NA A coding 812 2436 278 2713 PB.10716.1 chr22 + 2805 17 novel_not_in_catalog SLC5A1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1789 None 4 7 0 TRUE 0 0 NA A coding 664 1992 19 2010 PB.780.1 chr1 - 3369 1 antisense novelGene_LINC01133_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A coding 116 348 2760 3107 PB.8511.2 chr16 + 1574 3 genic_intron novelGene_239 novel NA NA NA NA no_subtype FALSE canonical NA NA 1371 None 2 8 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2781.1 chr4 + 1820 21 full-splice_match TBC1D19 ENST00000264866.8 2263 21 168 275 no_subtype FALSE canonical NA NA 1616 None 2 0 0 FALSE 0 0 NA A coding 526 1578 111 1688 PB.8382.5 chr16 + 2558 13 novel_in_catalog E4F1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1898 None 2 2 0 FALSE 0 0 NA C coding 526 1578 438 2015 PB.8382.2 chr16 + 2880 13 novel_in_catalog E4F1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2355 None 3 8 0 FALSE 0 0 NA C coding 447 1341 1369 2709 PB.9050.1 chr17 + 1803 1 incomplete-splice_match PSMD11 ENST00000261712.7 4098 14 2285 11 no_subtype FALSE canonical NA NA NA None 3 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8382.1 chr16 + 2576 14 full-splice_match E4F1 ENST00000301727.8 2573 14 -5 2 no_subtype FALSE canonical NA NA 2051 None 10 2 0 FALSE 0 0 NA C coding 780 2340 66 2405 PB.5588.1 chr9 - 1384 9 novel_not_in_catalog MED27 novel NA NA NA NA no_subtype FALSE canonical NA NA 226 None 2 2 0 TRUE 0 0 NA C coding 311 933 24 956 PB.2501.1 chr3 + 6465 4 novel_not_in_catalog ZBTB38 novel NA NA NA NA no_subtype FALSE canonical NA NA 4137 None 9 12 0 TRUE 0 0 NA A coding 1195 3585 172 3756 PB.438.1 chr1 - 2447 2 genic_intron novelGene_721 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2170 None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5588.2 chr9 - 1368 8 full-splice_match MED27 ENST00000292035.9 1431 8 53 10 no_subtype FALSE canonical NA NA 214 None 4 4 0 FALSE 0 0 NA C coding 311 933 12 944 PB.5588.5 chr9 - 2973 6 novel_in_catalog MED27 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 225 None 6 11 0 FALSE 0 0 NA C coding 253 759 23 781 PB.4563.1 chr7 - 2920 5 full-splice_match ACHE ENST00000302913.8 2956 5 35 1 no_subtype FALSE canonical NA NA 84 None 2 10 0 FALSE 0 0 NA A coding 617 1851 105 1955 PB.5588.7 chr9 - 1535 2 novel_in_catalog MED27 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 226 None 4 3 0 FALSE 0 0 NA C coding 120 360 24 383 PB.5588.6 chr9 - 2870 3 novel_in_catalog MED27 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 224 None 5 10 0 FALSE 0 0 NA C coding 160 480 22 501 PB.4180.2 chr6 + 2707 1 novel_in_catalog UTRN novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9557.1 chr18 + 3185 2 antisense novelGene_IER3IP1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 137 None 3 33 0 FALSE 0 0 NA A coding 106 318 129 446 PB.8203.2 chr15 + 2863 5 novel_not_in_catalog ARID3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2822 None 2 18 0 TRUE 0 0 NA B coding 243 729 176 904 PB.729.3 chr1 - 2642 12 novel_not_in_catalog YY1AP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 46 None 6 8 3 TRUE 0 0 NA B coding 730 2190 248 2437 PB.8203.1 chr15 + 3144 8 novel_not_in_catalog ARID3B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1653 None 2 19 0 TRUE 0 0 NA B coding 220 660 186 845 PB.4503.1 chr7 - 2779 18 novel_in_catalog KRIT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 75 None 4 4 0 FALSE 0 0 NA B coding 736 2208 209 2416 PB.4673.1 chr7 - 2916 2 genic_intron novelGene_1131 novel NA NA NA NA no_subtype FALSE canonical NA NA 2546 None 14 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9869.2 chr19 + 2881 4 incomplete-splice_match MAP1S ENST00000324096.8 3419 7 532 6 internal_fragment FALSE canonical NA NA 2643 None 4 4 0 FALSE 0 0 NA C coding 672 2016 781 2796 PB.9869.1 chr19 + 3283 7 full-splice_match MAP1S ENST00000324096.8 3419 7 132 4 no_subtype TRUE canonical NA NA 3043 None 62 2 0 FALSE 0 0 NA C coding 1059 3177 20 3196 PB.2610.1 chr3 + 1375 10 full-splice_match TTC14 ENST00000412756.6 4568 10 -16 3209 no_subtype FALSE canonical NA NA 1257 None 7 5 0 FALSE 0 0 NA C coding 430 1290 86 1375 PB.7125.1 chr12 + 1368 6 full-splice_match GLIPR1 ENST00000266659.7 5877 6 132 4377 no_subtype FALSE canonical NA NA 715 None 40 6 0 FALSE 0 0 NA C coding 266 798 70 867 PB.7125.2 chr12 + 4035 4 novel_not_in_catalog GLIPR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3528 None 5 22 1 TRUE 0 0 NA C coding 148 444 61 504 PB.4503.3 chr7 - 2785 2 novel_not_in_catalog KRIT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2519 None 2 24 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.8669.1 chr16 + 2024 10 full-splice_match E2F4 ENST00000379378.7 2096 10 69 3 no_subtype FALSE canonical NA NA 1116 None 23 10 0 FALSE 0 0 NA A coding 153 459 771 1229 PB.3036.1 chr4 + 3253 19 full-splice_match HSPA4L ENST00000296464.8 10790 19 171 7366 no_subtype FALSE canonical NA NA 2568 None 2 7 0 FALSE 0 0 NA A coding 839 2517 241 2757 PB.4503.2 chr7 - 2680 17 novel_in_catalog KRIT1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 106 None 7 8 0 FALSE 0 0 NA B coding 736 2208 109 2316 PB.10109.1 chr19 - 960 6 full-splice_match RRAS ENST00000246792.3 1044 6 81 3 no_subtype FALSE canonical NA NA 175 None 2 0 0 FALSE 0 0 NA A coding 218 654 23 676 PB.5664.2 chr10 + 2564 14 novel_in_catalog PFKFB3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1670 None 3 9 0 FALSE 0 0 NA C coding 521 1563 330 1892 PB.8519.5 chr16 - 5933 30 incomplete-splice_match GTF3C1 ENST00000356183.8 7018 37 1142 -57 5prime_fragment FALSE canonical NA NA 116 None 2 0 0 FALSE 0 0 NA B coding 1708 5124 78 5201 PB.291.2 chr1 - 2277 10 novel_not_in_catalog PPT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 133 None 33 13 0 TRUE 0 0 NA B coding 306 918 10 927 PB.291.3 chr1 - 2902 10 novel_not_in_catalog PPT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 214 None 2 22 2 TRUE 0 0 NA B coding 195 585 968 1552 PB.8519.3 chr16 - 7074 38 novel_not_in_catalog GTF3C1 novel NA NA NA NA no_subtype TRUE canonical NA NA 230 None 7 4 0 TRUE 0 0 NA B coding 2109 6327 10 6336 PB.8862.13 chr17 + 1667 15 novel_not_in_catalog ARRB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1120 None 2 7 2 TRUE 0 0 NA C coding 217 651 561 1211 PB.11192.2 chrX + 1537 9 novel_not_in_catalog NSDHL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 958 None 6 0 0 FALSE 0 0 NA C coding 373 1119 170 1288 PB.8862.11 chr17 + 1727 14 novel_in_catalog ARRB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1181 None 2 8 0 FALSE 0 0 NA C coding 229 687 586 1272 PB.8862.10 chr17 + 1752 15 novel_not_in_catalog ARRB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1202 None 2 11 1 TRUE 0 0 NA C coding 217 651 643 1293 PB.8862.16 chr17 + 1690 14 novel_in_catalog ARRB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1143 None 2 6 0 FALSE 0 0 NA C coding 217 651 584 1234 PB.8862.15 chr17 + 1692 15 novel_not_in_catalog ARRB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1142 None 14 6 1 FALSE 0 0 NA C coding 217 651 583 1233 PB.8862.14 chr17 + 1752 15 novel_not_in_catalog ARRB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1202 None 4 7 1 FALSE 0 0 NA C coding 217 651 643 1293 PB.6703.20 chr11 + 5501 39 novel_not_in_catalog SORL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 5312 None 4 1 0 TRUE 0 0 NA B coding 1525 4575 803 5377 PB.1388.2 chr2 + 2697 5 novel_not_in_catalog ETAA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2634 None 2 15 0 TRUE 0 0 NA B coding 145 435 111 545 PB.7617.10 chr14 - 3409 17 incomplete-splice_match ACIN1 ENST00000605057.5 4474 19 29 1036 internal_fragment FALSE canonical NA NA 150 None 2 2 0 FALSE 0 0 NA C coding 1132 3396 13 3408 PB.4476.1 chr7 + 3148 19 novel_not_in_catalog PTPN12 novel NA NA NA NA no_subtype FALSE canonical NA NA 2315 None 2 4 0 TRUE 0 0 NA B coding 780 2340 35 2374 PB.4476.2 chr7 + 3119 18 novel_not_in_catalog PTPN12 novel NA NA NA NA no_subtype FALSE canonical NA NA 2270 None 2 30 3 FALSE 0 0 NA B coding 661 1983 347 2329 PB.4476.3 chr7 + 3103 19 novel_not_in_catalog PTPN12 novel NA NA NA NA no_subtype FALSE canonical NA NA 2270 None 2 21 3 TRUE 0 0 NA B coding 661 1983 347 2329 PB.4583.1 chr7 + 2716 1 full-splice_match EIF4BP6 ENST00000431936.1 1828 1 -10 -878 no_subtype FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA C coding 331 993 11 1003 PB.1923.1 chr2 - 3193 15 full-splice_match NGEF ENST00000264051.7 3215 15 19 3 no_subtype FALSE canonical NA NA 186 None 7 7 0 FALSE 0 0 NA A coding 710 2130 261 2390 PB.8876.1 chr17 - 1511 12 incomplete-splice_match NUP88 ENST00000573584.5 2916 17 1392 13 5prime_fragment TRUE canonical NA NA 162 None 2 2 0 FALSE 0 0 NA A coding 443 1329 13 1341 PB.1879.2 chr2 + 1491 5 novel_not_in_catalog SPEG novel NA NA NA NA no_subtype FALSE canonical NA NA 688 None 2 1 0 FALSE 0 0 NA C coding 113 339 355 693 PB.5378.1 chr9 + 3652 15 incomplete-splice_match FAM120A ENST00000277165.10 5118 18 1050 416 internal_fragment FALSE canonical NA NA 2189 None 3 0 0 FALSE 0 0 NA A coding 784 2352 147 2498 PB.9861.2 chr19 + 3498 7 novel_not_in_catalog DDA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 488 None 2 15 0 TRUE 0 0 NA B coding 102 306 111 416 PB.9861.1 chr19 + 4019 6 novel_not_in_catalog DDA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 285 None 12 17 0 TRUE 0 0 NA B coding 102 306 88 393 PB.7891.1 chr14 - 2829 1 incomplete-splice_match DICER1 ENST00000393063.5 10220 28 7387 5 no_subtype FALSE canonical NA NA NA None 6 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6848.1 chr12 - 1195 6 full-splice_match ARHGDIB ENST00000228945.8 1256 6 44 17 no_subtype FALSE canonical NA NA 89 None 32 3 0 FALSE 0 0 NA C coding 201 603 102 704 PB.9881.1 chr19 + 1361 7 novel_not_in_catalog PGPEP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 517 None 2 4 0 TRUE 0 0 NA A coding 209 627 81 707 PB.6671.1 chr11 + 1405 4 incomplete-splice_match KMT2A ENST00000531904.6 4320 10 2331 584 internal_fragment FALSE canonical NA NA 1340 None 2 0 0 FALSE 0 0 NA B coding 457 1371 34 1404 PB.5020.1 chr8 - 2677 12 novel_not_in_catalog CCNE2 novel NA NA NA NA no_subtype FALSE canonical NA NA 34 None 5 11 0 TRUE 0 0 NA A coding 404 1212 59 1270 PB.6907.1 chr12 - 3150 1 genic_intron novelGene_403 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 16 0 FALSE 0 0 NA A coding 8 24 361 384 PB.6112.1 chr11 + 5265 20 novel_not_in_catalog PHRF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 5096 None 2 10 2 TRUE 0 0 NA B coding 909 2727 131 2857 PB.1442.2 chr2 + 3040 14 novel_not_in_catalog ELMOD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2054 None 4 10 1 FALSE 0 0 NA B coding 381 1143 1112 2254 PB.9793.1 chr19 - 1337 9 full-splice_match DHPS ENST00000210060.11 1363 9 23 3 no_subtype FALSE canonical NA NA 320 None 9 3 0 FALSE 0 0 NA A coding 369 1107 114 1220 PB.1442.1 chr2 + 1401 2 novel_in_catalog ELMOD3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 79 None 7 5 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10203.1 chr19 + 2957 5 novel_not_in_catalog ERVK3-1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2413 None 5 15 1 TRUE 0 0 NA A coding 150 450 231 680 PB.11054.2 chrX + 1808 1 novel_in_catalog P2RY10 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7191.1 chr12 - 1522 7 novel_not_in_catalog ARL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 116 None 133 11 1 TRUE 0 0 NA A coding 181 543 113 655 PB.9032.6 chr17 - 1470 9 novel_not_in_catalog CRLF3 novel NA NA NA NA no_subtype FALSE canonical NA NA 222 None 5 2 1 TRUE 0 0 NA C coding 438 1314 106 1419 PB.9032.5 chr17 - 2745 8 novel_not_in_catalog CRLF3 novel NA NA NA NA no_subtype FALSE canonical NA NA 53 None 2 16 0 FALSE 0 0 NA C coding 326 978 273 1250 PB.6112.2 chr11 + 5680 20 novel_not_in_catalog PHRF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 5511 None 2 14 4 TRUE 0 0 NA B coding 903 2709 130 2838 PB.9032.3 chr17 - 1491 8 full-splice_match CRLF3 ENST00000324238.6 2957 8 32 1434 no_subtype FALSE canonical NA NA 222 None 162 2 0 FALSE 0 0 NA C coding 438 1314 106 1419 PB.9032.1 chr17 - 2947 9 novel_not_in_catalog CRLF3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 235 None 5 20 0 TRUE 0 0 NA C coding 438 1314 119 1432 PB.7955.1 chr14 - 3380 18 full-splice_match BRF1 ENST00000547530.6 3358 18 -31 9 no_subtype FALSE canonical NA NA 274 None 5 13 0 FALSE 0 0 NA A coding 677 2031 91 2121 PB.10382.1 chr20 - 1382 1 full-splice_match MAFB ENST00000373313.2 3393 1 890 1121 no_subtype FALSE canonical NA NA NA None 8 9 0 FALSE 0 0 NA A coding 105 315 155 469 PB.2513.4 chr3 - 2521 1 genic_intron novelGene_1208 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 15 0 FALSE 0 0 NA A coding 104 312 1402 1713 PB.3246.2 chr5 + 3636 29 novel_not_in_catalog ITGA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3614 None 8 4 2 FALSE 0 0 NA B coding 768 2304 116 2419 PB.3246.3 chr5 + 1584 2 incomplete-splice_match PELO ENST00000274311.2 4349 3 736 2029 internal_fragment FALSE canonical NA NA 975 None 7 1 0 FALSE 0 0 NA A coding 385 1155 250 1404 PB.8718.3 chr16 - 2891 3 novel_not_in_catalog ST3GAL2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 59 None 4 13 0 TRUE 0 0 NA C coding 100 300 2342 2641 PB.3246.1 chr5 + 3800 1 novel_in_catalog ITGA1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4579.1 chr7 + 3216 13 full-splice_match PMPCB ENST00000249269.8 2472 13 31 -775 no_subtype TRUE canonical NA NA 1412 None 62 18 0 FALSE 0 0 NA A coding 489 1467 8 1474 PB.6557.1 chr11 - 1659 2 full-splice_match KCTD14 ENST00000353172.5 1691 2 26 6 no_subtype FALSE canonical NA NA 109 None 32 4 0 FALSE 0 0 NA A coding 255 765 20 784 PB.5381.1 chr9 + 3497 5 novel_not_in_catalog ZNF169 novel NA NA NA NA no_subtype FALSE canonical NA NA 315 None 8 8 0 FALSE 0 0 NA A coding 604 1812 57 1868 PB.7739.1 chr14 + 3518 9 novel_in_catalog PCNX4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2675 None 4 10 0 FALSE 0 0 NA A coding 938 2814 111 2924 PB.509.1 chr1 + 1664 1 novel_in_catalog AGL novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5600.1 chr9 - 3781 4 full-splice_match MED22 ENST00000457204.2 561 4 71 -3291 no_subtype FALSE canonical NA NA 119 None 44 17 0 FALSE 0 0 NA A coding 140 420 158 577 PB.6318.1 chr11 + 884 8 novel_not_in_catalog NDUFS3 novel NA NA NA NA no_subtype FALSE canonical NA NA 637 None 5 0 0 TRUE 0 0 NA A coding 264 792 11 802 PB.4947.7 chr8 - 2701 14 novel_not_in_catalog ASPH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 213 None 2 27 2 TRUE 0 0 NA B coding 281 843 146 988 PB.7584.1 chr13 + 2517 12 novel_not_in_catalog TFDP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1170 None 2 6 0 FALSE 0 0 NA A coding 406 1218 98 1315 PB.10104.1 chr19 + 2515 17 full-splice_match ALDH16A1 ENST00000293350.8 3153 17 141 497 no_subtype FALSE canonical NA NA 2269 None 46 5 0 FALSE 0 0 NA C coding 802 2406 23 2428 PB.4419.1 chr7 + 2957 1 genic_intron novelGene_493 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A coding 171 513 2236 2748 PB.4947.6 chr8 - 2894 16 novel_not_in_catalog ASPH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 293 None 4 13 3 TRUE 0 0 NA B coding 265 795 365 1159 PB.2732.1 chr4 + 1448 3 full-splice_match MRFAP1 ENST00000320912.8 2049 3 603 -2 no_subtype FALSE canonical NA NA 446 None 76 8 0 FALSE 0 0 NA C coding 127 381 51 431 PB.9344.1 chr17 + 3999 5 novel_in_catalog GPRC5C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1680 None 8 15 0 FALSE 0 0 NA A coding 542 1626 85 1710 PB.2732.2 chr4 + 1565 2 full-splice_match MRFAP1 ENST00000382581.4 1584 2 3 16 no_subtype FALSE canonical NA NA 565 None 22 8 0 FALSE 0 0 NA C coding 127 381 170 550 PB.8718.2 chr16 - 3696 7 full-splice_match ST3GAL2 ENST00000342907.2 4450 7 -25 779 no_subtype FALSE canonical NA NA 165 None 21 25 0 FALSE 0 0 NA C coding 350 1050 1169 2218 PB.4419.3 chr7 + 1803 1 genic_intron novelGene_496 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6124.2 chr11 + 3004 21 novel_not_in_catalog AP2A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2623 None 2 6 2 TRUE 0 0 NA B coding 868 2604 95 2698 PB.6124.1 chr11 + 4596 23 novel_not_in_catalog AP2A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2907 None 39 12 2 TRUE 0 0 NA B coding 944 2832 151 2982 PB.1551.1 chr2 - 3216 9 full-splice_match CKAP2L ENST00000302450.10 4533 9 51 1266 no_subtype FALSE canonical NA NA 65 None 3 14 0 FALSE 0 0 NA A coding 745 2235 29 2263 PB.213.4 chr1 + 1529 3 genic_intron novelGene_298 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1228 None 2 14 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.6927.1 chr12 + 1816 2 incomplete-splice_match PCED1B ENST00000546455.5 2328 4 505 7 internal_fragment FALSE canonical NA NA 169 None 2 3 0 FALSE 0 0 NA B coding 432 1296 227 1522 PB.2610.2 chr3 + 2841 12 full-splice_match TTC14 ENST00000296015.8 2881 12 33 7 no_subtype FALSE canonical NA NA 1499 None 6 8 0 FALSE 0 0 NA C coding 770 2310 100 2409 PB.503.2 chr1 + 3055 14 full-splice_match PTBP2 ENST00000609116.5 12014 14 7 8952 no_subtype FALSE canonical NA NA 1541 None 6 5 1 FALSE 0 0 NA A coding 532 1596 76 1671 PB.8586.1 chr16 - 1509 1 intergenic novelGene_312 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9783.1 chr19 - 1006 4 full-splice_match ELOF1 ENST00000252445.7 1019 4 6 7 no_subtype FALSE canonical NA NA 40 None 3 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4802.1 chr8 + 1368 1 full-splice_match C8orf48 ENST00000297324.4 1445 1 60 17 no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA A coding 319 957 90 1046 PB.5080.1 chr8 - 2857 2 genic_intron novelGene_1040 novel NA NA NA NA no_subtype FALSE canonical NA NA 475 None 4 25 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8219.1 chr15 - 1088 1 full-splice_match IMP3 ENST00000403490.2 1237 1 122 27 no_subtype FALSE canonical NA NA NA None 14 1 0 FALSE 0 0 NA A coding 184 552 34 585 PB.9779.3 chr19 + 2602 10 novel_in_catalog PLPPR2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1257 None 4 2 0 FALSE 0 0 NA C coding 318 954 334 1287 PB.9779.2 chr19 + 2692 10 novel_in_catalog PLPPR2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1347 None 9 2 0 FALSE 0 0 NA C coding 452 1356 333 1688 PB.9779.1 chr19 + 2690 10 full-splice_match PLPPR2 ENST00000251473.9 2727 10 30 7 no_subtype FALSE canonical NA NA 1345 None 12 2 0 FALSE 0 0 NA C coding 343 1029 347 1375 PB.7664.1 chr14 + 3338 3 antisense novelGene_RPL7AP3_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 579 None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5922.4 chr10 + 2729 1 genic_intron novelGene_852 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 14 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5574.1 chr9 - 2804 2 genic_intron novelGene_1125 novel NA NA NA NA no_subtype TRUE canonical NA NA 1934 None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7576.1 chr13 + 5662 21 novel_not_in_catalog ARHGEF7 novel NA NA NA NA no_subtype FALSE canonical NA NA 2926 None 2 19 1 TRUE 0 0 NA B coding 387 1161 1886 3046 PB.4566.6 chr7 + 3544 2 novel_not_in_catalog MUC12 novel NA NA NA NA no_subtype FALSE canonical NA NA 1987 None 2 13 1 TRUE 0 0 NA B coding 122 366 59 424 PB.11099.1 chrX + 2790 7 full-splice_match RNF128 ENST00000255499.2 2817 7 18 9 no_subtype FALSE canonical NA NA 1385 None 54 7 0 FALSE 0 0 NA A coding 428 1284 233 1516 PB.9004.2 chr17 + 2873 15 novel_not_in_catalog NEK8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2683 None 2 6 1 TRUE 0 0 NA B coding 250 750 28 777 PB.9004.3 chr17 + 2952 14 novel_not_in_catalog NEK8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2762 None 3 7 2 TRUE 0 0 NA B coding 250 750 25 774 PB.9004.4 chr17 + 3473 12 novel_not_in_catalog NEK8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3284 None 2 14 2 TRUE 0 0 NA B coding 250 750 28 777 PB.9004.5 chr17 + 2991 16 novel_not_in_catalog NEK8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2801 None 2 12 1 TRUE 0 0 NA B coding 431 1293 1206 2498 PB.9004.6 chr17 + 2721 15 novel_not_in_catalog NEK8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2529 None 2 8 1 TRUE 0 0 NA B coding 350 1050 27 1076 PB.9004.7 chr17 + 2633 16 novel_not_in_catalog NEK8 novel NA NA NA NA no_subtype TRUE canonical NA NA 2455 None 2 8 1 TRUE 0 0 NA B coding 460 1380 24 1403 PB.3598.1 chr5 + 4115 2 incomplete-splice_match MFAP3 ENST00000322602.9 2891 3 316 -1540 internal_fragment FALSE canonical NA NA 461 None 2 18 0 FALSE 0 0 NA A coding 362 1086 167 1252 PB.4951.1 chr8 + 2654 8 full-splice_match MTFR1 ENST00000262146.8 2640 8 -11 -3 no_subtype FALSE canonical NA NA 1070 None 7 13 0 FALSE 0 0 NA C coding 314 942 195 1136 PB.4951.2 chr8 + 1838 7 novel_in_catalog MTFR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1015 None 2 4 0 FALSE 0 0 NA C coding 314 942 140 1081 PB.5441.1 chr9 - 2499 1 incomplete-splice_match PTBP3 ENST00000374257.5 7240 14 2195 2547 no_subtype FALSE canonical NA NA NA None 10 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7959.21 chr14 - 1481 10 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 83 None 2 18 6 TRUE 0 0 NA B coding 251 753 678 1430 PB.7853.2 chr14 + 2070 16 full-splice_match TDP1 ENST00000393454.6 2068 16 -10 8 no_subtype FALSE canonical NA NA 1803 None 3 6 0 FALSE 0 0 NA C coding 608 1824 51 1874 PB.5002.2 chr8 - 2615 11 novel_not_in_catalog RMDN1 novel NA NA NA NA no_subtype TRUE canonical NA NA 162 None 4 22 0 TRUE 0 0 NA B coding 314 942 34 975 PB.7815.3 chr14 + 6455 21 full-splice_match YLPM1 ENST00000325680.11 7108 21 560 93 no_subtype FALSE canonical NA NA 6041 None 3 1 0 FALSE 0 0 NA C coding 1989 5967 36 6002 PB.9719.1 chr19 + 2029 14 full-splice_match MCOLN1 ENST00000264079.10 2082 14 51 2 no_subtype FALSE canonical NA NA 1780 None 4 1 0 FALSE 0 0 NA A coding 580 1740 75 1814 PB.7352.4 chr12 - 2508 19 novel_not_in_catalog SBNO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 161 None 14 0 0 TRUE 0 0 NA B coding 782 2346 162 2507 PB.2977.1 chr4 - 1507 1 incomplete-splice_match PPP3CA ENST00000394853.8 3604 13 2092 6 no_subtype FALSE canonical NA NA NA None 7 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6748.1 chr11 - 3482 25 novel_not_in_catalog NCAPD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 23 None 2 8 0 TRUE 0 0 NA B coding 956 2868 125 2992 PB.9164.1 chr17 + 1898 3 full-splice_match TMUB2 ENST00000357984.7 1921 3 17 6 no_subtype FALSE canonical NA NA 674 None 9 5 0 FALSE 0 0 NA A coding 301 903 133 1035 PB.10277.1 chr20 + 2914 1 genic_intron novelGene_106 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 17 0 FALSE 0 0 NA A coding 66 198 192 389 PB.417.1 chr1 + 1365 2 genic LEPROT novel NA NA NA NA no_subtype FALSE canonical NA NA 1018 None 13 7 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.1686.1 chr2 + 2397 10 full-splice_match GORASP2 ENST00000234160.4 3173 10 767 9 no_subtype FALSE canonical NA NA 1066 None 10 9 0 FALSE 0 0 NA A coding 452 1356 49 1404 PB.1837.1 chr2 + 2735 2 genic_intron novelGene_1396 novel NA NA NA NA no_subtype FALSE canonical NA NA 1961 None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6736.1 chr11 - 2685 1 genic_intron novelGene_1116 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1037.1 chr1 - 3599 21 novel_not_in_catalog INTS7 novel NA NA NA NA no_subtype FALSE canonical NA NA 194 None 2 9 0 TRUE 0 0 NA C coding 962 2886 101 2986 PB.2988.1 chr4 + 2637 5 novel_not_in_catalog TET2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1191 None 2 2 1 TRUE 0 0 NA B coding 436 1308 1330 2637 PB.1722.1 chr2 + 2827 1 novel_in_catalog PLEKHA3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5804.5 chr10 - 3231 2 genic_intron novelGene_640 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1921 None 6 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.659.2 chr1 - 1186 4 full-splice_match ENSA ENST00000369014.9 2085 4 1 898 no_subtype FALSE canonical NA NA 182 None 2 2 0 FALSE 0 0 NA C coding 121 363 126 488 PB.4786.1 chr8 + 2920 3 antisense novelGene_RP11-211C9.1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1787 None 2 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2623.1 chr3 - 5829 30 full-splice_match ABCC5 ENST00000334444.10 5921 30 86 6 no_subtype TRUE canonical NA NA 100 None 10 1 0 FALSE 0 0 NA A coding 1437 4311 156 4466 PB.7163.1 chr12 + 6470 33 novel_not_in_catalog PLXNC1 novel NA NA NA NA no_subtype TRUE canonical NA NA 3986 None 10 17 0 TRUE 0 0 NA B coding 1305 3915 174 4088 PB.1869.1 chr2 - 2886 19 full-splice_match ABCB6 ENST00000265316.7 3016 19 120 10 no_subtype TRUE canonical NA NA 746 None 29 3 0 FALSE 0 0 NA A coding 842 2526 198 2723 PB.2171.1 chr3 + 1692 2 full-splice_match TREX1 ENST00000629913.1 1426 2 402 -668 no_subtype FALSE canonical NA NA 53 None 8 11 0 FALSE 0 0 NA A coding 314 942 80 1021 PB.7986.1 chr15 - 1865 14 full-splice_match LPCAT4 ENST00000314891.10 2262 14 82 315 no_subtype FALSE canonical NA NA 210 None 10 5 0 FALSE 0 0 NA A coding 524 1572 97 1668 PB.4277.1 chr7 + 1668 1 incomplete-splice_match FOXK1 ENST00000328914.4 11181 9 9506 8 no_subtype FALSE canonical NA NA NA None 4 14 0 FALSE 0 0 NA A coding 148 444 718 1161 PB.624.1 chr1 - 1566 5 novel_not_in_catalog PEX11B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 70 None 20 4 1 TRUE 0 0 NA A coding 259 777 15 791 PB.2644.1 chr3 - 3513 17 novel_not_in_catalog IGF2BP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 236 None 4 21 0 TRUE 0 0 NA B coding 556 1668 59 1726 PB.3496.1 chr5 - 1676 4 full-splice_match CXCL14 ENST00000512158.5 1760 4 69 15 no_subtype FALSE canonical NA NA 281 None 22 2 0 FALSE 0 0 NA A coding 111 333 182 514 PB.7163.7 chr12 + 2832 1 novel_in_catalog PLXNC1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 26 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7316.2 chr12 + 2789 1 full-splice_match UNC119B ENST00000578311.1 74 1 -2343 -372 no_subtype FALSE canonical NA NA NA None 3 13 0 FALSE 0 0 NA C coding 171 513 658 1170 PB.1704.3 chr2 + 2523 9 full-splice_match CDCA7 ENST00000347703.7 2500 9 62 -85 no_subtype FALSE canonical NA NA 1167 None 2 6 0 FALSE 0 0 NA C coding 371 1113 83 1195 PB.3143.2 chr4 - 1476 4 novel_not_in_catalog IRF2 novel NA NA NA NA no_subtype TRUE canonical NA NA 95 None 2 3 1 TRUE 0 0 NA C coding 134 402 47 448 PB.3143.4 chr4 - 5523 3 genic_intron novelGene_1345 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 154 None 25 32 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1392.8 chr2 + 2604 12 novel_not_in_catalog ARHGAP25 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1775 None 2 9 1 TRUE 0 0 NA B coding 620 1860 121 1980 PB.1392.9 chr2 + 2524 11 novel_not_in_catalog ARHGAP25 novel NA NA NA NA no_subtype FALSE canonical NA NA 1682 None 161 2 0 TRUE 0 0 NA B coding 620 1860 28 1887 PB.1392.6 chr2 + 2660 12 novel_not_in_catalog ARHGAP25 novel NA NA NA NA no_subtype FALSE canonical NA NA 1831 None 2 2 0 TRUE 0 0 NA B coding 620 1860 177 2036 PB.1392.7 chr2 + 2847 1 genic_intron novelGene_648 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1392.4 chr2 + 2532 11 novel_not_in_catalog ARHGAP25 novel NA NA NA NA no_subtype FALSE canonical NA NA 1697 None 3 3 1 TRUE 0 0 NA B coding 607 1821 82 1902 PB.4939.1 chr8 - 2474 1 antisense novelGene_SDCBP_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6872.2 chr12 - 1348 5 novel_in_catalog KRAS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 171 None 5 6 0 FALSE 0 0 NA C coding 188 564 183 746 PB.8890.1 chr17 - 902 4 full-splice_match GABARAP ENST00000302386.9 1634 4 318 414 no_subtype FALSE canonical NA NA 212 None 39 3 0 FALSE 0 0 NA A coding 117 351 123 473 PB.2294.2 chr3 - 2090 17 full-splice_match UBA3 ENST00000349511.8 2112 17 19 3 no_subtype FALSE canonical NA NA 56 None 4 4 0 FALSE 0 0 NA C coding 449 1347 37 1383 PB.6872.1 chr12 - 1364 5 full-splice_match KRAS ENST00000311936.7 5765 5 -5 4406 no_subtype FALSE canonical NA NA 186 None 6 5 0 FALSE 0 0 NA C coding 188 564 198 761 PB.3904.2 chr6 - 1560 6 full-splice_match OARD1 ENST00000479950.5 3330 6 230 1540 no_subtype FALSE canonical NA NA 43 None 2 5 0 FALSE 0 0 NA C coding 152 456 85 540 PB.3904.1 chr6 - 1607 6 full-splice_match OARD1 ENST00000424266.6 1337 6 214 -484 no_subtype FALSE canonical NA NA 89 None 9 6 0 FALSE 0 0 NA C coding 152 456 131 586 PB.7619.1 chr14 - 3703 11 full-splice_match SLC7A8 ENST00000316902.11 4216 11 503 10 no_subtype FALSE canonical NA NA 374 None 3 12 0 FALSE 0 0 NA A coding 535 1605 224 1828 PB.9265.1 chr17 - 1657 13 novel_not_in_catalog SEPT4 novel NA NA NA NA no_subtype FALSE canonical NA NA 112 None 2 0 0 TRUE 0 0 NA A coding 459 1377 110 1486 PB.6441.3 chr11 + 2001 13 full-splice_match KAT5 ENST00000341318.8 2296 13 295 0 no_subtype FALSE canonical NA NA 1445 None 3 6 0 FALSE 0 0 NA C coding 302 906 672 1577 PB.3397.1 chr5 - 5823 2 genic_intron novelGene_919 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3674 None 16 31 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3160.1 chr5 + 2717 13 full-splice_match EXOC3 ENST00000512944.5 2825 13 95 13 no_subtype FALSE canonical NA NA 2160 None 113 1 0 FALSE 0 0 NA C coding 745 2235 95 2329 PB.3160.3 chr5 + 3041 14 novel_not_in_catalog EXOC3 novel NA NA NA NA no_subtype TRUE canonical NA NA 2862 None 2 4 0 TRUE 0 0 NA C coding 745 2235 95 2329 PB.3160.2 chr5 + 2676 13 novel_not_in_catalog EXOC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2112 None 2 5 0 FALSE 0 0 NA C coding 729 2187 95 2281 PB.7994.1 chr15 - 746 5 full-splice_match SRP14 ENST00000267884.10 1077 5 24 307 no_subtype FALSE canonical NA NA 72 None 8 4 0 FALSE 0 0 NA C coding 136 408 49 456 PB.7994.2 chr15 - 2885 3 novel_not_in_catalog SRP14 novel NA NA NA NA no_subtype FALSE canonical NA NA 69 None 4 29 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.386.1 chr1 - 6259 2 genic_intron novelGene_531 novel NA NA NA NA no_subtype FALSE canonical NA NA 2241 None 3 32 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5596.1 chr9 + 1404 1 full-splice_match EEF1A1P5 ENST00000436459.2 1389 1 267 -282 no_subtype FALSE canonical NA NA NA None 2 0 0 FALSE 0 0 NA A coding 361 1083 37 1119 PB.10923.3 chrX + 5503 14 novel_not_in_catalog DDX3X novel NA NA NA NA no_subtype FALSE canonical NA NA 2336 None 4 18 2 TRUE 0 0 NA C coding 404 1212 1112 2323 PB.3180.9 chr5 + 1607 1 incomplete-splice_match MARCH6 ENST00000274140.9 9569 26 4886 3077 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2610.3 chr3 + 2778 12 novel_not_in_catalog TTC14 novel NA NA NA NA no_subtype FALSE canonical NA NA 1430 None 2 20 0 FALSE 0 0 NA C coding 760 2280 61 2340 PB.5331.1 chr9 + 2600 2 genic_intron novelGene_716 novel NA NA NA NA no_subtype FALSE canonical NA NA 1218 None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6989.1 chr12 + 1732 5 novel_not_in_catalog SOAT2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1173 None 5 7 0 TRUE 0 0 NA A coding 104 312 118 429 PB.3180.2 chr5 + 2769 22 novel_in_catalog MARCH6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2322 None 4 5 0 FALSE 0 0 NA B coding 772 2316 175 2490 PB.3180.1 chr5 + 3026 25 novel_in_catalog MARCH6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2625 None 85 1 0 FALSE 0 0 NA B coding 842 2526 188 2713 PB.4203.1 chr6 + 2978 2 full-splice_match MYCT1 ENST00000367245.5 3030 2 50 2 no_subtype FALSE canonical NA NA 154 None 6 18 0 FALSE 0 0 NA A coding 187 561 103 663 PB.7605.1 chr14 - 3175 3 novel_not_in_catalog CHD8 novel NA NA NA NA no_subtype TRUE canonical NA NA 2905 None 2 23 1 TRUE 0 0 NA B coding 63 189 247 435 PB.3180.6 chr5 + 3469 25 novel_in_catalog MARCH6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2625 None 5 3 0 FALSE 0 0 NA B coding 842 2526 188 2713 PB.3180.5 chr5 + 2752 1 genic_intron novelGene_72 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3180.4 chr5 + 6438 27 novel_not_in_catalog MARCH6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4825 None 2 29 1 TRUE 0 0 NA B coding 910 2730 153 2882 PB.6225.4 chr11 + 1827 15 novel_in_catalog NUCB2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1688 None 2 4 0 FALSE 0 0 NA C coding 420 1260 434 1693 PB.6225.1 chr11 + 1031 8 novel_in_catalog NUCB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 929 None 2 2 0 FALSE 0 0 NA C coding 195 585 447 1031 PB.6225.2 chr11 + 1780 15 novel_in_catalog NUCB2 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 1670 None 8 3 0 FALSE 0 0 NA C coding 420 1260 416 1675 PB.6225.3 chr11 + 1600 14 full-splice_match NUCB2 ENST00000529010.5 2274 14 -16 690 no_subtype FALSE canonical NA NA 1490 None 2 1 0 FALSE 0 0 NA C coding 420 1260 236 1495 PB.9364.1 chr17 - 1527 7 full-splice_match SLC25A19 ENST00000442286.6 1496 7 -25 -6 no_subtype FALSE canonical NA NA 62 None 4 4 0 FALSE 0 0 NA A coding 320 960 101 1060 PB.4336.2 chr7 + 2906 5 novel_in_catalog CBX3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1634 None 2 13 0 FALSE 0 0 NA C coding 183 549 1210 1758 PB.4336.1 chr7 + 1804 6 full-splice_match CBX3 ENST00000396386.6 1857 6 56 -3 no_subtype FALSE canonical NA NA 531 None 18 9 0 FALSE 0 0 NA C coding 183 549 107 655 PB.2843.5 chr4 + 1621 16 novel_not_in_catalog FIP1L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1569 None 2 1 0 TRUE 0 0 NA C coding 489 1467 155 1621 PB.6613.1 chr11 - 1811 10 full-splice_match MMP12 ENST00000571244.2 1874 10 51 12 no_subtype FALSE canonical NA NA 148 None 27 1 0 FALSE 0 0 NA A coding 470 1410 47 1456 PB.8564.1 chr16 + 1515 11 novel_not_in_catalog PHKG2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 974 None 4 3 2 TRUE 0 0 NA C coding 406 1218 48 1265 PB.9816.1 chr19 + 3517 29 novel_not_in_catalog CC2D1A novel NA NA NA NA no_subtype TRUE canonical NA NA 3019 None 20 1 0 FALSE 0 0 NA B coding 947 2841 197 3037 PB.7333.1 chr12 - 1757 2 novel_not_in_catalog LINC01089 novel NA NA NA NA no_subtype FALSE canonical NA NA 559 None 11 17 1 TRUE 0 0 NA A coding 173 519 697 1215 PB.5952.3 chr10 - 3475 31 full-splice_match MMS19 ENST00000438925.6 3797 31 317 5 no_subtype FALSE canonical NA NA 131 None 18 3 0 FALSE 0 0 NA A coding 1030 3090 20 3109 PB.9486.1 chr18 + 1736 1 novel_in_catalog APCDD1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5353.13 chr9 - 5755 27 novel_not_in_catalog ZCCHC6 novel NA NA NA NA no_subtype FALSE canonical NA NA 297 None 3 5 0 FALSE 0 0 NA C coding 1495 4485 329 4813 PB.5353.12 chr9 - 5714 28 novel_not_in_catalog ZCCHC6 novel NA NA NA NA no_subtype FALSE canonical NA NA 108 None 11 4 0 FALSE 0 0 NA C coding 784 2352 2436 4787 PB.5353.11 chr9 - 5655 29 novel_not_in_catalog ZCCHC6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 140 None 3 8 3 TRUE 0 0 NA C coding 1475 4425 172 4596 PB.5353.10 chr9 - 6559 1 novel_in_catalog ZCCHC6 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 49 0 FALSE 0 0 NA C coding 113 339 2727 3065 PB.11105.2 chrX - 2741 1 incomplete-splice_match ACSL4 ENST00000348502.10 5032 16 2288 4 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5353.16 chr9 - 2915 1 novel_in_catalog ZCCHC6 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5353.15 chr9 - 5914 29 novel_not_in_catalog ZCCHC6 novel NA NA NA NA no_subtype FALSE canonical NA NA 230 None 2 7 0 FALSE 0 0 NA C coding 767 2301 2558 4858 PB.7092.3 chr12 + 2771 6 novel_not_in_catalog MSRB3 novel NA NA NA NA no_subtype TRUE canonical NA NA 1975 None 3 14 0 TRUE 0 0 NA C coding 106 318 192 509 PB.7092.2 chr12 + 1853 7 full-splice_match MSRB3 ENST00000308259.9 4417 7 84 2480 no_subtype FALSE canonical NA NA 580 None 12 6 0 FALSE 0 0 NA C coding 185 555 191 745 PB.7092.1 chr12 + 1726 6 full-splice_match MSRB3 ENST00000355192.7 4289 6 84 2479 no_subtype FALSE canonical NA NA 453 None 5 7 0 FALSE 0 0 NA C coding 192 576 43 618 PB.10564.1 chr21 - 2843 9 full-splice_match ERG ENST00000398905.5 4806 9 -41 2004 no_subtype FALSE canonical NA NA 121 None 5 2 0 FALSE 0 0 NA A coding 455 1365 104 1468 PB.7092.5 chr12 - 3056 1 genic RP11-230G5.2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A coding 101 303 834 1136 PB.7092.4 chr12 + 1914 2 antisense novelGene_RP11-230G5.2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1525 None 12 8 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5131.1 chr8 - 1596 1 novel_in_catalog SLA novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 10 6 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2027.1 chr3 + 3726 21 full-splice_match CAPN7 ENST00000253693.6 4353 21 6 621 no_subtype TRUE canonical NA NA 2544 None 17 8 0 FALSE 0 0 NA C coding 769 2307 380 2686 PB.10267.1 chr20 - 3415 16 novel_not_in_catalog FERMT1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 262 None 4 7 1 TRUE 0 0 NA A coding 677 2031 284 2314 PB.1267.1 chr2 + 3158 23 novel_not_in_catalog LTBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3014 None 6 4 0 TRUE 0 0 NA B coding 1007 3021 137 3157 PB.7267.1 chr12 + 2861 13 novel_not_in_catalog TRAFD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1997 None 18 1 0 TRUE 0 0 NA B coding 582 1746 306 2051 PB.2690.16 chr3 + 2891 4 novel_not_in_catalog PAK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2642 None 2 32 3 TRUE 0 0 NA B non_coding NA NA NA NA PB.7824.1 chr14 + 2615 1 genic_intron novelGene_706 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9668.2 chr19 + 1481 9 novel_in_catalog NFIC novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1294 None 4 0 0 FALSE 0 0 NA C coding 419 1257 53 1309 PB.2690.10 chr3 + 5786 17 novel_not_in_catalog PAK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5538 None 2 49 2 TRUE 0 0 NA B coding 524 1572 188 1759 PB.1360.1 chr2 + 1463 9 full-splice_match AHSA2 ENST00000489653.5 1197 9 -33 -233 no_subtype FALSE canonical NA NA 933 None 12 11 1 FALSE 0 0 NA A coding 198 594 507 1100 PB.8037.1 chr15 - 2334 14 novel_not_in_catalog EPB42 novel NA NA NA NA no_subtype FALSE canonical NA NA 196 None 6 3 1 TRUE 0 0 NA A coding 691 2073 187 2259 PB.1466.2 chr2 - 1452 7 novel_not_in_catalog CD8B novel NA NA NA NA no_subtype FALSE canonical NA NA 154 None 2 10 0 TRUE 0 0 NA B coding 210 630 112 741 PB.9705.2 chr19 - 3879 8 incomplete-splice_match MLLT1 ENST00000252674.8 4507 12 615 13 5prime_fragment FALSE canonical NA NA 95 None 9 14 0 FALSE 0 0 NA A coding 400 1200 27 1226 PB.3954.1 chr6 + 4435 4 full-splice_match ENPP4 ENST00000321037.4 4651 4 173 43 no_subtype FALSE canonical NA NA 1054 None 4 24 0 FALSE 0 0 NA A coding 453 1359 58 1416 PB.5826.1 chr10 - 1911 3 full-splice_match PRF1 ENST00000373209.2 2492 3 18 563 no_subtype FALSE canonical NA NA 97 None 51 7 0 FALSE 0 0 NA C coding 555 1665 102 1766 PB.4366.1 chr7 - 3005 3 incomplete-splice_match DPY19L1 ENST00000310974.8 4870 22 1851 14 5prime_fragment FALSE canonical NA NA 39 None 2 12 0 FALSE 0 0 NA A coding 85 255 65 319 PB.2263.1 chr3 - 3057 1 genic_intron novelGene_558 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 13 0 FALSE 0 0 NA A coding 114 342 1324 1665 PB.10995.18 chrX - 1618 9 novel_in_catalog ALAS2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 28 None 4 1 0 FALSE 0 0 NA C coding 478 1434 64 1497 PB.8993.1 chr17 + 3560 7 full-splice_match TNFAIP1 ENST00000226225.6 3627 7 64 3 no_subtype FALSE canonical NA NA 917 None 34 17 0 FALSE 0 0 NA A coding 316 948 204 1151 PB.1295.1 chr2 - 2669 1 genic COX7A2L novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA C coding 105 315 202 516 PB.10995.19 chrX - 1847 11 novel_not_in_catalog ALAS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 28 None 2 1 0 FALSE 0 0 NA C coding 561 1683 44 1726 PB.5287.1 chr9 + 920 1 full-splice_match HRCT1 ENST00000354323.2 950 1 26 4 no_subtype FALSE canonical NA NA NA None 5 5 0 FALSE 0 0 NA A coding 76 228 312 539 PB.6603.1 chr11 - 6225 6 novel_not_in_catalog MAML2 novel NA NA NA NA no_subtype FALSE canonical NA NA 288 None 2 10 0 TRUE 0 0 NA A coding 1156 3468 413 3880 PB.6603.3 chr11 + 3161 2 genic_intron novelGene_870 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2912 None 3 18 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.2673.1 chr3 - 3042 2 full-splice_match MB21D2 ENST00000392452.2 3368 2 280 46 no_subtype FALSE canonical NA NA 252 None 9 12 0 FALSE 0 0 NA A coding 489 1467 48 1514 PB.10925.1 chrX - 1932 1 incomplete-splice_match CASK ENST00000421587.6 8204 25 6266 7 no_subtype FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6603.7 chr11 - 2825 2 genic_intron novelGene_872 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1485 None 32 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.152.2 chr1 + 1373 8 novel_not_in_catalog TMEM50A novel NA NA NA NA no_subtype FALSE canonical NA NA 642 None 8 6 0 TRUE 0 0 NA C coding 157 471 131 601 PB.7491.1 chr13 + 1318 10 full-splice_match PHF11 ENST00000378319.7 1359 10 26 15 no_subtype FALSE canonical NA NA 856 None 9 2 0 FALSE 0 0 NA C coding 331 993 16 1008 PB.7491.2 chr13 + 1541 10 novel_in_catalog PHF11 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1079 None 2 7 0 FALSE 0 0 NA C coding 292 876 356 1231 PB.152.1 chr1 + 2611 7 full-splice_match TMEM50A ENST00000374358.4 2683 7 391 -319 no_subtype FALSE canonical NA NA 590 None 2 11 0 FALSE 0 0 NA C coding 157 471 163 633 PB.10008.1 chr19 - 1363 2 genic_intron novelGene_414 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 28 None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6261.1 chr11 + 1528 2 genic_intron novelGene_328 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 25 None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5752.2 chr10 - 3655 5 full-splice_match ZNF33B ENST00000359467.7 5958 5 -56 2359 no_subtype FALSE canonical NA NA 127 None 4 20 0 FALSE 0 0 NA C coding 778 2334 172 2505 PB.6184.1 chr11 + 3786 8 full-splice_match EIF3F ENST00000309828.4 1254 8 17 -2549 no_subtype FALSE canonical NA NA 1012 None 3 20 0 FALSE 0 0 NA A coding 357 1071 17 1087 PB.5752.1 chr10 - 4145 5 novel_not_in_catalog ZNF33B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 82 None 2 33 1 TRUE 0 0 NA C coding 798 2394 68 2461 PB.1996.1 chr3 - 2951 2 antisense novelGene_VHL_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2059 None 2 24 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6445.1 chr11 - 1093 4 full-splice_match CFL1 ENST00000308162.9 1234 4 138 3 no_subtype FALSE canonical NA NA 99 None 75 3 0 FALSE 0 0 NA C coding 166 498 97 594 PB.9988.1 chr19 + 1335 11 full-splice_match TIMM50 ENST00000607714.5 1338 11 17 -14 no_subtype FALSE canonical NA NA 965 None 17 1 0 FALSE 0 0 NA A coding 353 1059 6 1064 PB.2760.1 chr4 - 1236 7 full-splice_match QDPR ENST00000281243.9 1648 7 121 291 no_subtype FALSE canonical NA NA 164 None 33 2 0 FALSE 0 0 NA A coding 244 732 60 791 PB.5263.1 chr9 + 1868 2 novel_not_in_catalog UBE2R2 novel NA NA NA NA no_subtype FALSE canonical NA NA 464 None 3 22 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.2835.4 chr4 - 2866 1 novel_in_catalog TXK novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10189.2 chr19 + 2685 4 full-splice_match ZNF17 ENST00000307658.11 2716 4 9 22 no_subtype FALSE canonical NA NA 402 None 5 5 1 FALSE 0 0 NA C coding 664 1992 255 2246 PB.7288.1 chr12 - 2017 1 genic_intron novelGene_1028 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9403.7 chr17 - 2758 20 novel_not_in_catalog TMC6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 49 None 9 6 2 FALSE 0 0 NA B coding 805 2415 120 2534 PB.600.1 chr1 - 2691 1 genic_intron novelGene_1032 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 18 0 FALSE 0 0 NA A coding 105 315 2080 2394 PB.8459.7 chr16 - 1849 8 incomplete-splice_match MYH11 ENST00000396324.7 6847 42 5026 -28 5prime_fragment FALSE canonical NA NA 36 None 4 7 0 FALSE 0 0 NA C coding 319 957 43 999 PB.5322.1 chr9 - 1808 14 novel_not_in_catalog ALDH1A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 116 None 2 2 0 TRUE 0 0 NA B coding 501 1503 51 1553 PB.5775.3 chr10 + 4609 31 full-splice_match FAM21A ENST00000282633.9 4272 31 17 -354 no_subtype FALSE canonical NA NA 3914 None 5 8 0 FALSE 0 0 NA C coding 1341 4023 29 4051 PB.5775.2 chr10 + 3904 30 incomplete-splice_match FAM21A ENST00000282633.9 4272 31 -35 403 3prime_fragment FALSE canonical NA NA 3788 None 4 3 0 FALSE 0 0 NA C coding 1274 3822 81 3902 PB.5775.1 chr10 + 3668 29 incomplete-splice_match FAM21A ENST00000282633.9 4272 31 17 587 3prime_fragment FALSE canonical NA NA 3115 None 12 3 1 FALSE 0 0 NA C coding 1213 3639 29 3667 PB.10353.2 chr20 - 1669 1 antisense novelGene_RNU4-40P_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 8 0 FALSE 0 0 NA A coding 104 312 833 1144 PB.10353.3 chr20 + 3897 8 incomplete-splice_match PHF20 ENST00000374012.7 5922 18 1690 335 internal_fragment FALSE canonical NA NA 1335 None 2 17 0 FALSE 0 0 NA B coding 424 1272 204 1475 PB.10353.1 chr20 + 1698 11 incomplete-splice_match PHF20 ENST00000374012.7 5922 18 51 4173 3prime_fragment FALSE canonical NA NA 1639 None 30 0 0 FALSE 0 0 NA B coding 540 1620 79 1698 PB.10353.5 chr20 + 2881 4 novel_not_in_catalog PHF20 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2850 None 2 11 0 TRUE 0 0 NA B coding 56 168 327 494 PB.9350.1 chr17 + 1834 7 novel_not_in_catalog SLC9A3R1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1102 None 98 4 0 TRUE 0 0 NA B coding 358 1074 215 1288 PB.9350.2 chr17 + 3158 5 novel_in_catalog SLC9A3R1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2275 None 2 14 0 FALSE 0 0 NA B coding 293 879 218 1096 PB.5496.1 chr9 + 2972 1 genic_intron novelGene_1082 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 32 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6656.3 chr11 + 4405 27 novel_in_catalog SIDT2 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 2969 None 2 12 0 FALSE 0 0 NA C coding 836 2508 522 3029 PB.4077.9 chr6 - 2990 6 novel_not_in_catalog CD164 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 264 None 4 27 2 TRUE 0 0 NA C coding 141 423 90 512 PB.9091.2 chr17 + 5992 14 full-splice_match CDK12 ENST00000447079.4 8336 14 -531 2875 no_subtype FALSE canonical NA NA 4324 None 2 8 1 FALSE 0 0 NA C coding 1490 4470 565 5034 PB.9091.3 chr17 + 6218 16 novel_not_in_catalog CDK12 novel NA NA NA NA no_subtype TRUE canonical NA NA 4971 None 2 39 1 TRUE 0 0 NA C coding 413 1239 337 1575 PB.3294.1 chr5 + 1583 2 full-splice_match CTC-534A2.2 ENST00000510585.2 1766 2 -5 188 no_subtype FALSE canonical NA NA 347 None 2 6 0 FALSE 0 0 NA A coding 250 750 468 1217 PB.9091.1 chr17 + 5984 15 novel_not_in_catalog CDK12 novel NA NA NA NA no_subtype TRUE canonical NA NA 4348 None 2 10 0 TRUE 0 0 NA C coding 1480 4440 587 5026 PB.1355.1 chr2 + 3748 22 full-splice_match PAPOLG ENST00000238714.7 4263 22 12 503 no_subtype TRUE canonical NA NA 2349 None 7 15 0 FALSE 0 0 NA A coding 736 2208 238 2445 PB.5769.5 chr10 + 6634 37 novel_not_in_catalog WDFY4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5704 None 2 8 2 TRUE 0 0 NA B coding 1754 5262 153 5414 PB.1607.3 chr2 + 3009 7 novel_not_in_catalog UBXN4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1636 None 2 19 1 TRUE 0 0 NA B coding 274 822 49 870 PB.5769.7 chr10 + 6972 48 novel_not_in_catalog WDFY4 novel NA NA NA NA no_subtype FALSE canonical NA NA 6526 None 3 4 0 TRUE 0 0 NA B coding 2180 6540 51 6590 PB.5769.1 chr10 + 1442 1 genic WDFY4 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5769.3 chr10 + 7240 38 novel_not_in_catalog WDFY4 novel NA NA NA NA no_subtype TRUE canonical NA NA 6223 None 3 16 2 TRUE 0 0 NA B coding 1388 4164 312 4475 PB.5297.1 chr9 + 3421 1 genic_intron novelGene_359 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.817.2 chr1 - 3317 1 antisense novelGene_UHMK1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5560.3 chr9 - 2840 15 novel_in_catalog CRAT novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 246 None 5 9 0 FALSE 0 0 NA C coding 627 1881 358 2238 PB.4077.5 chr6 - 2860 7 novel_not_in_catalog CD164 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 123 None 2 33 2 TRUE 0 0 NA C coding 151 453 75 527 PB.9824.52 chr19 + 1356 7 incomplete-splice_match ADGRE5 ENST00000357355.7 3054 19 1688 10 internal_fragment FALSE canonical NA NA 732 None 6 4 0 FALSE 0 0 NA C coding 206 618 142 759 PB.8672.1 chr16 - 1965 12 novel_in_catalog ZDHHC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 294 None 5 4 0 FALSE 0 0 NA A coding 479 1437 342 1778 PB.3049.3 chr4 - 3185 1 genic_intron novelGene_1178 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6656.4 chr11 + 4210 26 full-splice_match SIDT2 ENST00000324225.8 4406 26 194 2 no_subtype FALSE canonical NA NA 2773 None 11 12 0 FALSE 0 0 NA C coding 832 2496 338 2833 PB.3049.1 chr4 - 5694 1 incomplete-splice_match SETD7 ENST00000274031.7 7365 8 1668 4 no_subtype FALSE canonical NA NA NA None 2 30 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5560.4 chr9 - 2812 15 novel_not_in_catalog CRAT novel NA NA NA NA no_subtype FALSE canonical NA NA 266 None 3 19 0 TRUE 0 0 NA C coding 627 1881 329 2209 PB.2748.2 chr4 - 1589 2 full-splice_match HS3ST1 ENST00000510712.1 496 2 -157 -936 no_subtype FALSE canonical NA NA 297 None 2 5 0 FALSE 0 0 NA C coding 307 921 406 1326 PB.2748.3 chr4 - 1783 2 novel_not_in_catalog HS3ST1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1168 None 6 15 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.4423.3 chr7 - 1878 1 genic_intron novelGene_540 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2748.1 chr4 - 1482 2 full-splice_match HS3ST1 ENST00000002596.5 8031 2 875 5674 no_subtype FALSE canonical NA NA 192 None 8 2 0 FALSE 0 0 NA C coding 307 921 301 1221 PB.4729.6 chr7 + 2875 21 novel_in_catalog CUL1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2374 None 2 1 0 FALSE 0 0 NA B coding 455 1365 1088 2452 PB.4729.5 chr7 + 2993 10 novel_not_in_catalog CUL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1501 None 2 9 1 TRUE 0 0 NA B coding 413 1239 289 1527 PB.4729.4 chr7 + 1734 2 novel_in_catalog CUL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 133 None 2 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5477.2 chr9 - 4004 9 novel_not_in_catalog TRAF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 300 None 2 13 0 FALSE 0 0 NA B coding 416 1248 666 1913 PB.5477.3 chr9 - 2812 1 novel_in_catalog TRAF1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 11 15 0 FALSE 0 0 NA B coding 162 486 300 785 PB.2538.7 chr3 + 3153 2 novel_not_in_catalog MBNL1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 25 None 32 14 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.4077.6 chr6 - 2982 6 full-splice_match CD164 ENST00000504373.1 1402 6 -36 -1544 no_subtype FALSE canonical NA NA 233 None 3 28 1 FALSE 0 0 NA C coding 155 465 185 649 PB.2538.1 chr3 + 1633 1 genic_intron novelGene_1247 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 14 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1444.6 chr2 - 1411 12 novel_not_in_catalog CAPG novel NA NA NA NA no_subtype FALSE canonical NA NA 61 None 4 3 2 TRUE 0 0 NA C coding 348 1044 230 1273 PB.2538.3 chr3 + 5469 9 full-splice_match MBNL1 ENST00000355460.6 5941 9 446 26 no_subtype FALSE canonical NA NA 2099 None 2 13 0 FALSE 0 0 NA C coding 370 1110 969 2078 PB.2538.2 chr3 + 2714 2 novel_in_catalog MBNL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 202 None 3 25 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.9996.4 chr19 - 3776 13 novel_in_catalog AKT2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 173 None 3 32 0 FALSE 0 0 NA C coding 392 1176 258 1433 PB.3587.12 chr5 - 2533 16 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 137 None 4 6 1 FALSE 0 0 NA B coding 368 1104 667 1770 PB.10604.18 chr21 - 2735 17 novel_not_in_catalog ITGB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 79 None 2 9 1 TRUE 0 0 NA C coding 776 2328 83 2410 PB.10930.1 chrX - 1336 2 antisense novelGene_MAOA_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1144 None 2 8 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9624.1 chr19 + 1542 10 novel_not_in_catalog BSG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1142 None 85 14 3 TRUE 0 0 NA A coding 273 819 20 838 PB.9996.2 chr19 - 3220 14 full-splice_match AKT2 ENST00000392038.6 5300 14 58 2022 no_subtype FALSE canonical NA NA 157 None 54 13 0 FALSE 0 0 NA C coding 481 1443 242 1684 PB.10870.1 chrX + 3050 3 novel_not_in_catalog TCEANC novel NA NA NA NA no_subtype FALSE canonical NA NA 155 None 2 14 0 FALSE 0 0 NA B coding 351 1053 164 1216 PB.7959.289 chr14 - 1955 8 fusion IGHV3-60,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 114 None 2 13 2 TRUE 0 0 NA A coding 488 1464 374 1837 PB.10939.13 chrX + 3504 2 novel_in_catalog UBA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2348 None 4 21 0 FALSE 0 0 NA C coding 160 480 2222 2701 PB.7254.5 chr12 - 1573 6 novel_not_in_catalog HVCN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 180 None 3 9 0 FALSE 0 0 NA B coding 253 759 220 978 PB.8171.1 chr15 + 2666 19 full-splice_match ZWILCH ENST00000307897.9 3960 19 376 918 no_subtype TRUE canonical NA NA 1806 None 10 5 0 FALSE 0 0 NA A coding 591 1773 5 1777 PB.3825.1 chr6 + 2527 1 full-splice_match HSPA1B ENST00000375650.4 2521 1 2 -8 no_subtype FALSE canonical NA NA NA None 17 4 0 FALSE 0 0 NA A coding 641 1923 215 2137 PB.2148.2 chr3 + 2667 2 novel_not_in_catalog CCR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 2 14 0 FALSE 0 0 NA B coding 66 198 147 344 PB.7959.281 chr14 - 1954 8 fusion IGHV1-3,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 101 None 2 12 1 TRUE 0 0 NA A coding 375 1125 710 1834 PB.7959.280 chr14 - 1877 8 fusion IGHV4-34,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 15 2 TRUE 0 0 NA B coding 375 1125 633 1757 PB.7959.283 chr14 - 1925 8 fusion IGHV4-34,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 81 None 2 13 2 TRUE 0 0 NA B coding 597 1791 15 1805 PB.5958.1 chr10 - 1490 3 full-splice_match SFRP5 ENST00000266066.3 1836 3 341 5 no_subtype FALSE canonical NA NA 307 None 2 4 0 FALSE 0 0 NA A coding 179 537 193 729 PB.7959.285 chr14 - 1889 7 fusion IGHV2-5,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 66 None 2 14 2 TRUE 0 0 NA A coding 583 1749 21 1769 PB.7959.284 chr14 - 1947 9 fusion IGHV3-62,IGHM novel NA NA NA NA no_subtype TRUE non_canonical NA NA 124 None 2 9 1 TRUE 0 0 NA A coding 583 1749 79 1827 PB.5761.2 chr10 + 2090 2 full-splice_match ZNF22 ENST00000298299.3 2551 2 457 4 no_subtype FALSE canonical NA NA 47 None 25 10 0 FALSE 0 0 NA C coding 224 672 137 808 PB.5761.3 chr10 + 2065 2 novel_not_in_catalog ZNF22 novel NA NA NA NA no_subtype FALSE canonical NA NA 22 None 6 11 0 FALSE 0 0 NA C coding 224 672 112 783 PB.51.3 chr1 + 2890 14 novel_not_in_catalog PGD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2378 None 2 19 0 TRUE 0 0 NA B coding 370 1110 53 1162 PB.51.2 chr1 + 2225 14 novel_not_in_catalog PGD novel NA NA NA NA no_subtype FALSE canonical NA NA 1362 None 303 7 0 TRUE 0 0 NA B coding 483 1449 31 1479 PB.51.1 chr1 + 5782 42 novel_not_in_catalog KIF1B novel NA NA NA NA no_subtype FALSE canonical NA NA 5693 None 2 16 1 TRUE 0 0 NA A coding 1478 4434 4 4437 PB.3078.4 chr4 - 3012 2 genic_intron novelGene_1230 novel NA NA NA NA no_subtype FALSE canonical NA NA 2312 None 4 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3964.1 chr6 + 3077 3 novel_not_in_catalog PAQR8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2384 None 9 8 1 TRUE 0 0 NA C coding 354 1062 168 1229 PB.51.6 chr1 + 1974 13 novel_not_in_catalog PGD novel NA NA NA NA no_subtype FALSE canonical NA NA 1461 None 7 4 0 TRUE 0 0 NA B coding 470 1410 169 1578 PB.51.5 chr1 + 3149 13 novel_not_in_catalog PGD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2636 None 3 11 0 TRUE 0 0 NA B coding 364 1092 53 1144 PB.10465.1 chr20 + 1720 12 full-splice_match NPEPL1 ENST00000356091.10 2378 12 221 437 no_subtype FALSE canonical NA NA 1480 None 2 1 0 FALSE 0 0 NA A coding 523 1569 68 1636 PB.2875.1 chr4 - 512 3 full-splice_match PF4 ENST00000296029.3 604 3 99 -7 no_subtype FALSE canonical NA NA 163 None 15 3 0 FALSE 0 0 NA A coding 101 303 73 375 PB.3420.1 chr5 + 6166 1 genic DCP2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 67 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3041.2 chr4 + 3288 9 full-splice_match JADE1 ENST00000511647.5 3560 9 106 166 no_subtype FALSE canonical NA NA 1076 None 7 10 0 FALSE 0 0 NA C coding 509 1527 96 1622 PB.3041.1 chr4 + 3616 11 full-splice_match JADE1 ENST00000226319.10 5772 11 187 1969 no_subtype FALSE canonical NA NA 1715 None 14 5 1 FALSE 0 0 NA C coding 842 2526 95 2620 PB.615.1 chr1 + 1393 1 antisense novelGene_SEC22B_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9968.1 chr19 + 1278 7 full-splice_match PSMD8 ENST00000602911.5 1330 7 25 27 no_subtype FALSE canonical NA NA 733 None 13 1 0 FALSE 0 0 NA A coding 287 861 8 868 PB.4706.1 chr7 - 2780 2 novel_not_in_catalog HIPK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1974 None 7 15 1 TRUE 0 0 NA B coding 124 372 1456 1827 PB.9386.2 chr17 - 5300 18 novel_not_in_catalog UBE2O novel NA NA NA NA no_subtype FALSE canonical NA NA 426 None 3 12 1 FALSE 0 0 NA A coding 1005 3015 10 3024 PB.5781.1 chr10 + 4425 1 genic_intron novelGene_509 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3713.1 chr6 + 1306 9 novel_not_in_catalog NQO2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1026 None 2 4 1 TRUE 0 0 NA A coding 231 693 508 1200 PB.9664.1 chr19 - 2609 4 genic AC005262.2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1442 None 2 27 3 TRUE 0 0 NA B coding 236 708 1079 1786 PB.1341.1 chr2 - 2791 15 incomplete-splice_match CCDC88A ENST00000621814.4 3089 16 -256 554 internal_fragment FALSE canonical NA NA 853 None 8 1 0 FALSE 0 0 NA A coding 667 2001 791 2791 PB.6031.1 chr10 - 2839 3 antisense novelGene_RP11-139K1.2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 473 None 6 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10176.1 chr19 + 2112 12 full-splice_match U2AF2 ENST00000450554.6 3022 12 903 7 no_subtype FALSE canonical NA NA 1337 None 14 4 0 FALSE 0 0 NA A coding 471 1413 57 1469 PB.701.1 chr1 - 1669 7 full-splice_match C1orf43 ENST00000368521.9 1708 7 16 23 no_subtype FALSE canonical NA NA 249 None 35 4 0 FALSE 0 0 NA C coding 253 759 184 942 PB.10070.4 chr19 - 3167 19 full-splice_match PRKD2 ENST00000433867.5 3321 19 151 3 no_subtype FALSE canonical NA NA 162 None 7 2 0 FALSE 0 0 NA C coding 878 2634 328 2961 PB.10070.5 chr19 - 3013 18 novel_not_in_catalog PRKD2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 218 None 2 11 0 TRUE 0 0 NA C coding 398 1194 1615 2808 PB.7878.1 chr14 - 2511 2 full-splice_match MOAP1 ENST00000556883.1 2529 2 9 9 no_subtype FALSE canonical NA NA 356 None 3 13 0 FALSE 0 0 NA A coding 351 1053 477 1529 PB.2151.2 chr3 + 1695 2 full-splice_match CCRL2 ENST00000399036.3 1796 2 98 3 no_subtype FALSE canonical NA NA 242 None 7 0 0 FALSE 0 0 NA C coding 344 1032 255 1286 PB.7923.3 chr14 + 2089 7 full-splice_match WDR25 ENST00000335290.10 2123 7 10 24 no_subtype FALSE canonical NA NA 1629 None 2 2 0 FALSE 0 0 NA C coding 536 1608 241 1848 PB.918.2 chr1 - 2616 1 incomplete-splice_match EDEM3 ENST00000367512.7 6678 21 2711 1352 no_subtype FALSE canonical NA NA NA None 4 12 0 FALSE 0 0 NA B coding 81 243 153 395 PB.7431.1 chr13 - 2904 1 antisense novelGene_PDS5B_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5207.1 chr9 - 5378 11 novel_not_in_catalog GLIS3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 147 None 2 18 1 TRUE 0 0 NA A coding 708 2124 218 2341 PB.11224.2 chrX - 1650 6 full-splice_match CLIC2 ENST00000369449.6 2655 6 -32 1037 no_subtype FALSE canonical NA NA 308 None 10 1 0 FALSE 0 0 NA C coding 247 741 252 992 PB.11219.1 chrX + 1477 14 incomplete-splice_match DKC1 ENST00000369550.9 2577 15 128 972 3prime_fragment FALSE canonical NA NA 1420 None 11 0 0 FALSE 0 0 NA C coding 465 1395 83 1477 PB.3935.2 chr6 + 1900 7 novel_not_in_catalog ABCC10 novel NA NA NA NA no_subtype TRUE canonical NA NA 1406 None 5 6 1 TRUE 0 0 NA B coding 303 909 658 1566 PB.7274.8 chr12 + 1308 1 incomplete-splice_match OAS2 ENST00000342315.8 3613 11 2303 3 no_subtype FALSE canonical NA NA NA None 10 3 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8602.2 chr16 - 2805 4 full-splice_match SNX20 ENST00000330943.8 2904 4 47 52 no_subtype FALSE canonical NA NA 116 None 13 6 0 FALSE 0 0 NA C coding 316 948 126 1073 PB.10197.1 chr19 + 1843 3 antisense novelGene_ZSCAN18_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1701 None 3 10 1 FALSE 0 0 NA A coding 134 402 1106 1507 PB.7274.1 chr12 + 4559 10 novel_not_in_catalog OAS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1926 None 16 14 1 FALSE 0 0 NA B coding 401 1203 36 1238 PB.7274.3 chr12 + 3788 8 novel_not_in_catalog OAS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1155 None 4 13 0 TRUE 0 0 NA B coding 422 1266 56 1321 PB.7274.2 chr12 + 4513 11 novel_not_in_catalog OAS2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1878 None 19 24 0 TRUE 0 0 NA B coding 651 1953 92 2044 PB.7274.7 chr12 + 2719 2 incomplete-splice_match OAS2 ENST00000392583.6 4734 10 2016 -1 internal_fragment FALSE canonical NA NA 86 None 7 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4755.1 chr7 - 2466 15 full-splice_match ABCF2 ENST00000287844.6 3546 15 39 1041 no_subtype FALSE canonical NA NA 29 None 16 4 0 FALSE 0 0 NA A coding 623 1869 72 1940 PB.5925.2 chr10 + 3064 1 novel_in_catalog FFAR4 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C coding 221 663 30 692 PB.1004.8 chr1 + 2678 1 incomplete-splice_match SRGAP2 ENST00000573034.7 6301 22 3613 11 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA B coding 101 303 1997 2299 PB.9394.2 chr17 - 1872 3 full-splice_match SRSF2 ENST00000359995.9 1927 3 42 13 no_subtype FALSE canonical NA NA 534 None 24 3 0 FALSE 0 0 NA C coding 209 627 209 835 PB.6948.1 chr12 - 1544 4 full-splice_match TUBA1B ENST00000336023.9 1627 4 0 83 no_subtype FALSE canonical NA NA 98 None 697 0 0 FALSE 0 0 NA A coding 451 1353 96 1448 PB.7357.1 chr12 - 1740 9 novel_not_in_catalog EIF2B1 novel NA NA NA NA no_subtype FALSE canonical NA NA 109 None 38 6 1 FALSE 0 0 NA A coding 162 486 97 582 PB.2355.4 chr3 + 2665 8 incomplete-splice_match BBX ENST00000325805.12 3517 18 1327 -475 internal_fragment FALSE canonical NA NA 1698 None 2 21 0 FALSE 0 0 NA C coding 560 1680 104 1783 PB.6050.1 chr10 - 1576 7 full-splice_match PRDX3 ENST00000298510.3 1591 7 6 9 no_subtype FALSE canonical NA NA 73 None 237 5 0 FALSE 0 0 NA A coding 256 768 38 805 PB.79.1 chr1 + 1620 5 novel_in_catalog TMEM82 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1185 None 2 5 0 FALSE 0 0 NA A coding 110 330 940 1269 PB.8471.1 chr16 + 2827 2 genic_intron novelGene_161 novel NA NA NA NA no_subtype FALSE canonical NA NA 106 None 4 22 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.97.2 chr1 - 4210 25 novel_not_in_catalog EMC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 116 None 22 15 0 TRUE 0 0 NA A coding 993 2979 22 3000 PB.10466.11 chr20 + 3134 1 genic_intron novelGene_566 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10466.10 chr20 + 5723 2 novel_not_in_catalog GNAS novel NA NA NA NA no_subtype FALSE canonical NA NA 1042 None 3 45 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.1756.3 chr2 + 6169 2 genic GLS novel NA NA NA NA no_subtype FALSE canonical NA NA 2066 None 2 44 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.6685.2 chr11 - 4474 26 novel_in_catalog HYOU1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 68 None 11 15 0 FALSE 0 0 NA B coding 999 2997 76 3072 PB.1970.1 chr3 - 2162 13 novel_not_in_catalog CRBN novel NA NA NA NA no_subtype TRUE canonical NA NA 80 None 6 13 1 TRUE 0 0 NA B coding 442 1326 14 1339 PB.1970.2 chr3 - 1372 12 novel_not_in_catalog CRBN novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 9 0 0 TRUE 0 0 NA B coding 442 1326 5 1330 PB.5481.1 chr9 + 1672 1 antisense novelGene_STOM_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9394.3 chr17 - 2867 2 full-splice_match SRSF2 ENST00000392485.2 2885 2 1 17 no_subtype FALSE canonical NA NA 534 None 7 4 0 FALSE 0 0 NA C coding 209 627 209 835 PB.3678.1 chr5 - 2094 17 full-splice_match DDX41 ENST00000507955.5 2607 17 508 5 no_subtype FALSE canonical NA NA 43 None 7 0 0 FALSE 0 0 NA A coding 622 1866 17 1882 PB.6928.1 chr12 - 3625 17 full-splice_match RPAP3 ENST00000005386.7 4370 17 54 691 no_subtype FALSE canonical NA NA 56 None 3 10 0 FALSE 0 0 NA A coding 665 1995 63 2057 PB.7568.1 chr13 + 2975 2 full-splice_match ABHD13 ENST00000375898.3 5338 2 130 2233 no_subtype FALSE canonical NA NA 151 None 17 9 0 FALSE 0 0 NA A coding 337 1011 172 1182 PB.4420.1 chr7 - 3391 4 full-splice_match FIGNL1 ENST00000422854.5 582 4 38 -2847 no_subtype FALSE canonical NA NA 30 None 2 14 1 FALSE 0 0 NA C coding 674 2022 238 2259 PB.4420.2 chr7 - 3309 3 full-splice_match FIGNL1 ENST00000615084.4 3368 3 51 8 no_subtype FALSE canonical NA NA 39 None 2 20 1 FALSE 0 0 NA C coding 674 2022 159 2180 PB.10006.1 chr19 - 1432 1 antisense novelGene_AXL_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 1 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1004.1 chr1 + 6880 23 novel_in_catalog SRGAP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3484 None 5 13 1 FALSE 0 0 NA B coding 1071 3213 653 3865 PB.1193.4 chr2 + 2644 1 incomplete-splice_match LPIN1 ENST00000256720.6 5384 20 2735 6 no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA B coding 152 456 1900 2355 PB.1193.1 chr2 + 5307 22 novel_not_in_catalog LPIN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2553 None 2 14 0 TRUE 0 0 NA B coding 890 2670 41 2710 PB.7886.1 chr14 - 1905 2 antisense novelGene_IFI27_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1849 None 2 11 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7886.2 chr14 + 2765 1 novel_in_catalog IFI27 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 16 11 0 FALSE 0 0 NA C coding 115 345 948 1292 PB.7178.1 chr12 + 3563 15 full-splice_match NEDD1 ENST00000429527.6 3366 15 14 -211 no_subtype FALSE canonical NA NA 1949 None 8 10 0 FALSE 0 0 NA C coding 660 1980 72 2051 PB.5675.6 chr10 + 2011 5 novel_not_in_catalog CELF2 novel NA NA NA NA no_subtype TRUE canonical NA NA 863 None 21 5 1 TRUE 0 0 NA B coding 161 483 22 504 PB.5675.7 chr10 + 3673 6 novel_in_catalog CELF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 625 None 2 17 0 FALSE 0 0 NA B coding 159 477 22 498 PB.10187.1 chr19 - 2997 2 antisense novelGene_CTC-444N24.11_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2203 None 7 29 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5675.5 chr10 + 1703 12 novel_in_catalog CELF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1360 None 4 1 1 FALSE 0 0 NA B coding 488 1464 22 1485 PB.5675.2 chr10 + 1668 12 incomplete-splice_match CELF2 ENST00000636488.1 3908 14 231 2009 internal_fragment FALSE canonical NA NA 1345 None 14 0 0 FALSE 0 0 NA B coding 484 1452 19 1470 PB.4440.1 chr7 + 3206 10 novel_not_in_catalog RABGEF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3155 None 5 11 0 TRUE 0 0 NA A coding 491 1473 78 1550 PB.5675.1 chr10 + 3618 11 novel_in_catalog CELF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1268 None 8 6 0 FALSE 0 0 NA B coding 280 840 554 1393 PB.3335.1 chr5 + 3561 20 incomplete-splice_match IQGAP2 ENST00000379730.7 5442 35 1875 6 internal_fragment FALSE canonical NA NA 2636 None 2 8 0 FALSE 0 0 NA A coding 865 2595 153 2747 PB.217.1 chr1 + 1869 10 full-splice_match SERINC2 ENST00000373709.7 1997 10 120 8 no_subtype FALSE canonical NA NA 1262 None 19 8 0 FALSE 0 0 NA A coding 455 1365 31 1395 PB.741.2 chr1 + 3172 12 full-splice_match LMNA ENST00000368300.8 3190 12 7 11 no_subtype FALSE canonical NA NA 2173 None 69 5 0 FALSE 0 0 NA C coding 664 1992 206 2197 PB.6595.1 chr11 + 3975 1 full-splice_match SRSF8 ENST00000587424.2 4028 1 30 23 no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA C coding 282 846 1 846 PB.741.4 chr1 + 1964 10 incomplete-splice_match LMNA ENST00000368301.6 2461 13 496 1 internal_fragment FALSE canonical NA NA 1753 None 75 1 0 FALSE 0 0 NA C coding 572 1716 146 1861 PB.741.5 chr1 + 4040 10 novel_not_in_catalog LMNA novel NA NA NA NA no_subtype FALSE canonical NA NA 2391 None 4 10 0 TRUE 0 0 NA C coding 341 1023 209 1231 PB.5675.8 chr10 + 3590 8 novel_not_in_catalog CELF2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2742 None 2 9 0 TRUE 0 0 NA B coding 159 477 19 495 PB.5675.9 chr10 + 6292 3 antisense novelGene_RP3-323N1.2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4238 None 2 37 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.1789.1 chr2 + 2816 1 genic_intron novelGene_1375 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1323.1 chr2 + 2834 2 antisense novelGene_AC093732.1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2095 None 2 6 0 FALSE 0 0 NA A coding 164 492 1423 1914 PB.7862.2 chr14 + 1528 1 genic_intron novelGene_838 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.11074.1 chrX - 3821 19 novel_not_in_catalog SYTL4 novel NA NA NA NA no_subtype FALSE canonical NA NA 117 None 8 11 0 TRUE 0 0 NA B coding 671 2013 276 2288 PB.7862.1 chr14 + 1536 2 genic_intron novelGene_838 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 19 None 6 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5925.1 chr10 + 1712 3 full-splice_match FFAR4 ENST00000371481.8 3605 3 19 1874 no_subtype FALSE canonical NA NA 733 None 2 6 0 FALSE 0 0 NA C coding 361 1083 38 1120 PB.516.1 chr1 + 1450 11 full-splice_match RTCA ENST00000370128.8 2535 11 83 1002 no_subtype FALSE canonical NA NA 1085 None 19 2 0 FALSE 0 0 NA A coding 366 1098 87 1184 PB.696.2 chr1 - 2649 14 full-splice_match CRTC2 ENST00000368633.1 2644 14 -4 -1 no_subtype FALSE canonical NA NA 285 None 28 4 0 FALSE 0 0 NA C coding 693 2079 133 2211 PB.670.5 chr1 - 3015 5 novel_not_in_catalog CDC42SE1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 133 None 2 29 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.7043.1 chr12 - 1786 10 full-splice_match ATP5B ENST00000262030.7 1839 10 48 5 no_subtype FALSE canonical NA NA 184 None 392 2 0 FALSE 0 0 NA C coding 529 1587 58 1644 PB.2502.4 chr3 + 2895 1 novel_in_catalog RASA2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.354.1 chr1 + 2794 6 full-splice_match CMPK1 ENST00000371873.9 2930 6 111 25 no_subtype FALSE canonical NA NA 683 None 2 13 0 FALSE 0 0 NA C coding 228 684 39 722 PB.8828.1 chr17 - 2767 13 novel_not_in_catalog INPP5K novel NA NA NA NA no_subtype FALSE canonical NA NA 108 None 129 9 1 TRUE 0 0 NA A coding 448 1344 182 1525 PB.2502.3 chr3 + 1805 2 genic_intron novelGene_1193 novel NA NA NA NA no_subtype FALSE canonical NA NA 1453 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2854.1 chr4 + 3764 1 incomplete-splice_match REST ENST00000619101.4 7114 4 3349 2 no_subtype FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8688.5 chr16 - 2838 2 novel_in_catalog DPEP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2249 None 19 9 0 FALSE 0 0 NA B coding 155 465 1928 2392 PB.8042.1 chr15 + 1689 4 incomplete-splice_match MAP1A ENST00000300231.5 10258 6 15 8554 3prime_fragment FALSE canonical NA NA 285 None 6 0 0 FALSE 0 0 NA A coding 418 1254 436 1689 PB.701.2 chr1 - 1565 6 novel_not_in_catalog C1orf43 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 220 None 2 5 0 TRUE 0 0 NA C coding 226 678 163 840 PB.775.3 chr1 + 1657 11 novel_not_in_catalog FCRL6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1446 None 3 5 1 TRUE 0 0 NA B coding 339 1017 114 1130 PB.9279.3 chr17 + 1699 2 genic_intron novelGene_580 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 66 None 2 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5495.2 chr9 + 6317 2 genic RP11-121A14.3 novel NA NA NA NA no_subtype FALSE canonical NA NA 947 None 2 31 1 TRUE 0 0 NA A coding 121 363 5099 5461 PB.5495.3 chr9 + 2575 10 novel_in_catalog NEK6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 975 None 5 9 0 FALSE 0 0 NA C coding 313 939 145 1083 PB.6111.4 chr11 + 1598 5 novel_in_catalog RASSF7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1137 None 2 5 0 FALSE 0 0 NA C coding 330 990 47 1036 PB.5121.1 chr8 - 2880 2 genic_intron novelGene_1100 novel NA NA NA NA no_subtype TRUE canonical NA NA 509 None 4 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6111.2 chr11 + 1520 6 novel_in_catalog RASSF7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1059 None 4 3 0 FALSE 0 0 NA C coding 366 1098 47 1144 PB.6111.3 chr11 + 1437 5 novel_in_catalog RASSF7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 976 None 2 5 1 FALSE 0 0 NA C coding 313 939 47 985 PB.4448.1 chr7 - 1735 7 incomplete-splice_match BAZ1B ENST00000404251.1 5428 19 263 3430 internal_fragment FALSE canonical NA NA 189 None 2 2 0 FALSE 0 0 NA B coding 551 1653 83 1735 PB.6111.1 chr11 + 1708 4 full-splice_match RASSF7 ENST00000397582.7 1731 4 29 -6 no_subtype FALSE canonical NA NA 878 None 22 3 0 FALSE 0 0 NA C coding 330 990 78 1067 PB.4851.1 chr8 - 4059 7 novel_not_in_catalog TRIM35 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 452 None 9 14 0 TRUE 0 0 NA A coding 493 1479 18 1496 PB.3641.1 chr5 - 3990 7 novel_not_in_catalog KCNMB1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 78 None 2 16 2 TRUE 0 0 NA B coding 191 573 103 675 PB.5833.2 chr10 - 1884 10 novel_not_in_catalog SPOCK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 455 None 43 6 1 FALSE 0 0 NA B coding 315 945 587 1531 PB.5833.1 chr10 - 3516 1 incomplete-splice_match SPOCK2 ENST00000317376.8 5328 12 1810 3 no_subtype FALSE canonical NA NA NA None 9 29 0 FALSE 0 0 NA B coding 102 306 176 481 PB.9809.1 chr19 - 1277 7 novel_in_catalog TRMT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 86 None 2 7 0 FALSE 0 0 NA A coding 335 1005 119 1123 PB.8111.1 chr15 + 4086 5 novel_not_in_catalog POLR2M novel NA NA NA NA no_subtype FALSE canonical NA NA 1075 None 15 28 0 TRUE 0 0 NA A coding 368 1104 110 1213 PB.5696.1 chr10 - 3501 11 full-splice_match TRDMT1 ENST00000377799.7 3527 11 22 4 no_subtype FALSE canonical NA NA 90 None 2 14 0 FALSE 0 0 NA A coding 391 1173 27 1199 PB.1639.1 chr2 - 2658 5 full-splice_match RND3 ENST00000375734.6 2777 5 2 117 no_subtype FALSE canonical NA NA 398 None 65 10 0 FALSE 0 0 NA A coding 244 732 249 980 PB.8688.4 chr16 - 1317 9 novel_not_in_catalog DPEP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 141 None 3 1 0 FALSE 0 0 NA B coding 328 984 226 1209 PB.6991.3 chr12 - 2755 16 novel_not_in_catalog ITGB7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 50 None 104 2 1 TRUE 0 0 NA C coding 798 2394 130 2523 PB.4436.1 chr7 + 1526 17 full-splice_match ASL ENST00000304874.13 2143 17 6 611 no_subtype FALSE canonical NA NA 1346 None 14 0 0 FALSE 0 0 NA A coding 464 1392 97 1488 PB.5648.1 chr10 - 4058 23 novel_in_catalog DIP2C novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 338 None 2 9 0 FALSE 0 0 NA A coding 1000 3000 251 3250 PB.10459.3 chr20 + 1901 8 novel_not_in_catalog PCK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1154 None 2 9 1 TRUE 0 0 NA C coding 374 1122 135 1256 PB.10459.2 chr20 + 1815 1 incomplete-splice_match PCK1 ENST00000467047.1 5074 2 30 3230 no_subtype FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10459.1 chr20 + 1639 2 full-splice_match PCK1 ENST00000475833.1 1037 2 7 -609 no_subtype FALSE canonical NA NA 94 None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6991.1 chr12 - 2756 17 novel_not_in_catalog ITGB7 novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 2 3 0 FALSE 0 0 NA C coding 798 2394 128 2521 PB.10459.5 chr20 + 3098 9 novel_in_catalog PCK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1989 None 7 9 0 FALSE 0 0 NA C coding 329 987 135 1121 PB.10459.4 chr20 + 2655 10 full-splice_match PCK1 ENST00000319441.5 4341 10 30 1656 no_subtype FALSE canonical NA NA 1548 None 24 8 0 FALSE 0 0 NA C coding 622 1866 135 2000 PB.8536.1 chr16 + 1307 2 novel_not_in_catalog SPN novel NA NA NA NA no_subtype FALSE canonical NA NA 361 None 2 5 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.5073.1 chr8 - 2751 7 novel_in_catalog EIF3H novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 155 None 4 8 0 FALSE 0 0 NA C coding 179 537 2041 2577 PB.5345.12 chr9 - 2053 18 novel_not_in_catalog HNRNPK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 36 None 10 4 1 TRUE 0 0 NA C coding 464 1392 167 1558 PB.6586.1 chr11 + 3891 1 incomplete-splice_match FAT3 ENST00000533797.1 7894 8 4001 3 no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.183.1 chr1 + 4289 17 novel_not_in_catalog WDTC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2236 None 2 28 1 TRUE 0 0 NA A coding 677 2031 401 2431 PB.8452.1 chr16 + 2529 8 full-splice_match BFAR ENST00000261658.6 3039 8 105 405 no_subtype FALSE canonical NA NA 1332 None 6 3 0 FALSE 0 0 NA C coding 450 1350 173 1522 PB.922.1 chr1 + 2985 7 full-splice_match RNF2 ENST00000367510.7 3606 7 185 436 no_subtype FALSE canonical NA NA 1012 None 43 10 0 FALSE 0 0 NA A coding 336 1008 104 1111 PB.1694.1 chr2 + 2538 16 full-splice_match DYNC1I2 ENST00000340296.8 2589 16 47 4 no_subtype FALSE canonical NA NA 1906 None 2 3 0 FALSE 0 0 NA A coding 612 1836 182 2017 PB.11186.4 chrX + 3374 15 novel_not_in_catalog MTM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1663 None 2 6 1 FALSE 0 0 NA B coding 377 1131 13 1143 PB.11186.1 chrX + 3420 16 novel_not_in_catalog MTM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1710 None 27 3 1 FALSE 0 0 NA B coding 377 1131 60 1190 PB.4398.1 chr7 + 1385 7 full-splice_match UBE2D4 ENST00000222402.7 3974 7 15 2574 no_subtype FALSE canonical NA NA 472 None 7 3 0 FALSE 0 0 NA A coding 147 441 75 515 PB.5101.1 chr8 - 3914 3 novel_in_catalog ZHX1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 63 None 4 7 0 FALSE 0 0 NA A coding 873 2619 403 3021 PB.10877.1 chrX - 1574 7 full-splice_match ASB9 ENST00000380488.8 1678 7 92 12 no_subtype FALSE canonical NA NA 276 None 2 3 0 FALSE 0 0 NA A coding 294 882 183 1064 PB.2937.2 chr4 - 3464 1 genic_intron novelGene_789 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A coding 100 300 2541 2840 PB.4051.2 chr6 - 1740 8 novel_not_in_catalog ATG5 novel NA NA NA NA no_subtype FALSE canonical NA NA 268 None 22 2 0 FALSE 0 0 NA C coding 275 825 327 1151 PB.8364.2 chr16 - 3683 27 novel_not_in_catalog CLCN7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 221 None 8 16 1 TRUE 0 0 NA B coding 805 2415 81 2495 PB.1628.1 chr2 + 3052 1 genic_intron novelGene_1216 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8364.1 chr16 - 3638 27 novel_not_in_catalog CLCN7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 176 None 2 16 1 TRUE 0 0 NA B coding 747 2241 210 2450 PB.5136.2 chr8 - 2722 7 novel_in_catalog ST3GAL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 264 None 2 4 0 FALSE 0 0 NA C coding 340 1020 841 1860 PB.5136.3 chr8 + 4079 2 antisense novelGene_ST3GAL1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2508 None 2 22 1 FALSE 0 0 NA B coding 139 417 1693 2109 PB.3144.2 chr4 - 2650 8 novel_not_in_catalog CASP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 66 None 24 18 0 FALSE 0 0 NA B coding 277 831 249 1079 PB.5136.1 chr8 - 2821 10 full-splice_match ST3GAL1 ENST00000522652.5 2580 10 -199 -42 no_subtype FALSE canonical NA NA 356 None 5 3 0 FALSE 0 0 NA C coding 340 1020 938 1957 PB.5136.4 chr8 - 1642 1 genic_intron novelGene_1154 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 11 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5974.4 chr10 + 4083 15 novel_in_catalog SEMA4G novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1776 None 3 6 0 FALSE 0 0 NA B coding 838 2514 87 2600 PB.2030.6 chr3 - 1710 4 novel_not_in_catalog SH3BP5 novel NA NA NA NA no_subtype FALSE canonical NA NA 312 None 2 8 1 TRUE 0 0 NA C coding 112 336 175 510 PB.10853.1 chrX - 3689 11 novel_not_in_catalog ARSD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 75 None 3 13 0 TRUE 0 0 NA C coding 593 1779 32 1810 PB.2746.1 chr4 - 6669 1 genic ZNF518B novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 32 0 FALSE 0 0 NA C coding 1074 3222 213 3434 PB.2746.2 chr4 - 2984 2 full-splice_match ZNF518B ENST00000507515.1 527 2 5 -2462 no_subtype FALSE canonical NA NA 84 None 5 7 0 FALSE 0 0 NA C coding 896 2688 296 2983 PB.10853.2 chrX - 4175 10 full-splice_match ARSD ENST00000381154.5 5159 10 15 969 no_subtype FALSE canonical NA NA 105 None 4 15 0 FALSE 0 0 NA C coding 593 1779 62 1840 PB.4845.2 chr8 + 6119 14 novel_in_catalog DOCK5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1617 None 3 35 0 FALSE 0 0 NA B coding 558 1674 46 1719 PB.8179.3 chr15 + 1323 2 novel_in_catalog PIAS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 33 None 7 6 0 FALSE 0 0 NA C coding 161 483 10 492 PB.4845.1 chr8 + 6789 21 incomplete-splice_match DOCK5 ENST00000276440.11 10075 52 3276 10 internal_fragment FALSE canonical NA NA 2276 None 3 35 0 FALSE 0 0 NA B coding 792 2376 3 2378 PB.8179.6 chr15 + 2525 1 novel_in_catalog PIAS1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8179.7 chr15 + 3783 1 incomplete-splice_match PIAS1 ENST00000249636.10 8115 14 1947 2386 no_subtype FALSE canonical NA NA NA None 2 35 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5552.2 chr9 - 1827 12 full-splice_match C9orf114 ENST00000361256.9 4286 12 26 2433 no_subtype FALSE canonical NA NA 51 None 15 6 0 FALSE 0 0 NA A coding 376 1128 16 1143 PB.4845.5 chr8 + 3628 1 incomplete-splice_match DOCK5 ENST00000276440.11 10075 52 6437 11 no_subtype FALSE canonical NA NA NA None 6 31 0 FALSE 0 0 NA B coding 103 309 515 823 PB.3851.4 chr6 + 1563 4 antisense novelGene_TAPBP_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1308 None 98 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3851.6 chr6 + 2236 15 full-splice_match PHF1 ENST00000374516.7 2330 15 76 18 no_subtype FALSE canonical NA NA 1610 None 5 7 1 FALSE 0 0 NA C coding 567 1701 196 1896 PB.3851.7 chr6 + 2751 13 novel_in_catalog PHF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2125 None 6 3 0 FALSE 0 0 NA C coding 276 828 847 1674 PB.3851.1 chr6 + 1579 2 antisense novelGene_TAPBP_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 658 None 16 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7100.1 chr12 + 2956 1 incomplete-splice_match DYRK2 ENST00000344096.3 8912 3 906 5051 no_subtype FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA A coding 408 1224 87 1310 PB.3851.3 chr6 + 1541 6 antisense novelGene_TAPBP_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1447 None 2 14 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.10619.1 chr22 + 3275 8 novel_not_in_catalog BCL2L13 novel NA NA NA NA no_subtype FALSE canonical NA NA 3055 None 6 14 1 TRUE 0 0 NA B coding 485 1455 191 1645 PB.164.1 chr1 + 462 2 full-splice_match CD52 ENST00000374213.2 468 2 1 5 no_subtype FALSE canonical NA NA 114 None 3 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9319.3 chr17 + 2980 16 novel_in_catalog NOL11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2574 None 2 5 0 FALSE 0 0 NA C coding 374 1122 610 1731 PB.9319.2 chr17 + 2522 18 full-splice_match NOL11 ENST00000253247.8 2947 18 79 346 no_subtype FALSE canonical NA NA 2079 None 9 4 0 FALSE 0 0 NA C coding 719 2157 37 2193 PB.3037.1 chr4 + 3700 16 full-splice_match PLK4 ENST00000270861.9 3841 16 52 89 no_subtype FALSE canonical NA NA 3032 None 7 6 0 FALSE 0 0 NA A coding 929 2787 346 3132 PB.3851.9 chr6 + 2234 15 full-splice_match PHF1 ENST00000495509.6 1752 15 -101 -381 no_subtype FALSE canonical NA NA 1611 None 2 4 1 FALSE 0 0 NA C coding 419 1257 208 1464 PB.9291.1 chr17 - 3187 1 antisense novelGene_MAP3K3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 11 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8855.1 chr17 - 1313 1 incomplete-splice_match UBE2G1 ENST00000396981.6 3974 6 2659 3 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10979.1 chrX - 2533 13 full-splice_match MAGED4B ENST00000335504.9 2578 13 42 3 no_subtype FALSE canonical NA NA 77 None 2 0 0 FALSE 0 0 NA A coding 741 2223 109 2331 PB.3221.1 chr5 - 2581 5 full-splice_match TTC33 ENST00000337702.4 2612 5 28 3 no_subtype FALSE canonical NA NA 124 None 12 7 0 FALSE 0 0 NA A coding 262 786 126 911 PB.11048.1 chrX + 2929 5 novel_in_catalog ATP7A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1500 None 2 7 0 FALSE 0 0 NA A coding 550 1650 165 1814 PB.3616.3 chr5 - 5532 1 antisense novelGene_CYFIP2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 44 0 FALSE 0 0 NA B coding 130 390 1774 2163 PB.5974.2 chr10 + 4480 15 novel_in_catalog SEMA4G novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2171 None 3 9 0 FALSE 0 0 NA B coding 843 2529 467 2995 PB.7687.1 chr14 - 2595 2 antisense novelGene_ARF6_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 23 None 42 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10331.1 chr20 + 2575 3 antisense novelGene_EIF2S2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2489 None 2 23 2 FALSE 0 0 NA A coding 112 336 1147 1482 PB.700.1 chr1 - 2166 9 full-splice_match TPM3 ENST00000328159.8 1771 9 -70 -325 no_subtype FALSE canonical NA NA 202 None 4 12 0 FALSE 0 0 NA C coding 248 744 71 814 PB.700.3 chr1 - 2905 7 novel_in_catalog TPM3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 216 None 5 14 0 FALSE 0 0 NA C coding 152 456 85 540 PB.700.2 chr1 - 4214 6 novel_in_catalog TPM3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 202 None 4 24 0 FALSE 0 0 NA C coding 152 456 71 526 PB.1574.6 chr2 - 1677 15 novel_not_in_catalog BIN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 23 None 2 6 2 TRUE 0 0 NA B coding 308 924 12 935 PB.1574.7 chr2 - 1727 15 novel_not_in_catalog BIN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 39 None 2 7 2 TRUE 0 0 NA B coding 323 969 28 996 PB.10762.2 chr22 + 2782 1 incomplete-splice_match GTPBP1 ENST00000216044.9 5126 12 2338 7 no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA C coding 120 360 2260 2619 PB.10762.1 chr22 + 3549 12 full-splice_match GTPBP1 ENST00000216044.9 5126 12 226 1351 no_subtype FALSE canonical NA NA 1924 None 7 17 0 FALSE 0 0 NA C coding 660 1980 35 2014 PB.8875.2 chr17 + 5695 18 novel_not_in_catalog RABEP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2540 None 2 42 0 TRUE 0 0 NA B coding 815 2445 195 2639 PB.8875.1 chr17 + 3631 19 novel_not_in_catalog RABEP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2693 None 2 7 0 TRUE 0 0 NA B coding 862 2586 207 2792 PB.10114.3 chr19 + 2470 17 novel_in_catalog MED25 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2350 None 2 7 0 FALSE 0 0 NA C coding 298 894 1552 2445 PB.4109.2 chr6 + 1221 5 full-splice_match PKIB ENST00000368452.6 1398 5 173 4 no_subtype FALSE canonical NA NA 460 None 7 9 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.9829.1 chr19 - 1225 3 full-splice_match DNAJB1 ENST00000254322.2 2264 3 26 1013 no_subtype FALSE canonical NA NA 256 None 27 2 0 FALSE 0 0 NA A coding 340 1020 46 1065 PB.8849.1 chr17 + 2811 1 full-splice_match GSG2 ENST00000325418.5 2797 1 -20 6 no_subtype FALSE canonical NA NA NA None 6 3 0 FALSE 0 0 NA A coding 798 2394 54 2447 PB.4109.1 chr6 + 3539 2 novel_not_in_catalog PKIB novel NA NA NA NA no_subtype FALSE canonical NA NA 2926 None 9 17 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.7746.1 chr14 - 3465 2 novel_not_in_catalog TMEM30B novel NA NA NA NA no_subtype FALSE canonical NA NA 2482 None 33 19 0 TRUE 0 0 NA A coding 351 1053 326 1378 PB.10290.5 chr20 + 2908 1 genic_intron novelGene_187 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 12 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10080.1 chr19 + 1733 2 novel_not_in_catalog C5AR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 164 None 5 4 1 FALSE 0 0 NA A coding 337 1011 180 1190 PB.935.1 chr1 + 1341 5 full-splice_match RGS2 ENST00000235382.6 1354 5 1 12 no_subtype FALSE canonical NA NA 471 None 18 1 0 FALSE 0 0 NA C coding 211 633 31 663 PB.10489.1 chr20 + 2278 7 full-splice_match TPD52L2 ENST00000346249.8 2297 7 13 6 no_subtype FALSE canonical NA NA 588 None 6 7 0 FALSE 0 0 NA C coding 206 618 64 681 PB.2658.1 chr3 - 5769 5 novel_not_in_catalog BCL6 novel NA NA NA NA no_subtype FALSE canonical NA NA 57 None 2 14 1 TRUE 0 0 NA B coding 321 963 2168 3130 PB.5079.1 chr8 - 1638 1 genic_intron novelGene_1038 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2279.1 chr3 + 1577 2 antisense novelGene_PRICKLE2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 26 None 2 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7169.1 chr12 + 2953 13 full-splice_match VEZT ENST00000547997.5 3002 13 47 2 no_subtype TRUE canonical NA NA 1947 None 4 3 0 FALSE 0 0 NA A coding 731 2193 261 2453 PB.4721.5 chr7 + 1561 1 genic_intron novelGene_1197 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8250.1 chr15 + 7077 29 full-splice_match CEMIP ENST00000220244.7 7226 29 30 119 no_subtype FALSE canonical NA NA 4216 None 2 12 0 FALSE 0 0 NA A coding 1361 4083 259 4341 PB.5184.1 chr8 - 1606 2 full-splice_match ZNF251 ENST00000530353.1 2342 2 948 -212 no_subtype FALSE canonical NA NA 1278 None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.67.1 chr1 + 2697 6 full-splice_match PDPN ENST00000376057.8 2801 6 99 5 no_subtype FALSE canonical NA NA 649 None 8 15 0 FALSE 0 0 NA A coding 160 480 174 653 PB.4831.1 chr8 + 2585 6 novel_not_in_catalog TNFRSF10C novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1675 None 3 21 4 TRUE 0 0 NA A non_coding NA NA NA NA PB.6957.1 chr12 - 4075 25 full-splice_match FMNL3 ENST00000352151.9 4006 25 -53 -16 no_subtype FALSE canonical NA NA 392 None 4 6 0 FALSE 0 0 NA C coding 976 2928 267 3194 PB.10904.1 chrX + 3078 13 novel_not_in_catalog PDK3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1371 None 26 2 0 TRUE 0 0 NA C coding 415 1245 155 1399 PB.1682.2 chr2 + 1604 14 novel_in_catalog PPIG novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1549 None 2 3 0 FALSE 0 0 NA C coding 403 1209 396 1604 PB.4501.1 chr7 - 1696 10 full-splice_match CYP51A1 ENST00000003100.12 3210 10 56 1458 no_subtype FALSE canonical NA NA 302 None 43 3 0 FALSE 0 0 NA A coding 509 1527 111 1637 PB.7050.2 chr12 + 2731 10 novel_in_catalog LRP1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 1899 None 2 7 0 FALSE 0 0 NA B coding 522 1566 483 2048 PB.2219.1 chr3 - 2026 3 full-splice_match CISH ENST00000348721.3 2043 3 47 -30 no_subtype FALSE canonical NA NA 154 None 7 3 0 FALSE 0 0 NA A coding 258 774 135 908 PB.8012.4 chr15 + 2873 1 incomplete-splice_match OIP5-AS1 ENST00000500949.6 8829 4 1414 4543 no_subtype FALSE canonical NA NA NA None 2 33 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3686.1 chr5 - 2409 5 full-splice_match ZNF354A ENST00000335815.6 2484 5 43 32 no_subtype FALSE canonical NA NA 104 None 4 10 1 FALSE 0 0 NA A coding 605 1815 156 1970 PB.6165.3 chr11 + 3820 7 novel_in_catalog TRIM22 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2019 None 6 11 0 FALSE 0 0 NA C coding 309 927 1686 2612 PB.6165.2 chr11 + 2794 8 full-splice_match TRIM22 ENST00000379965.7 2989 8 193 2 no_subtype FALSE canonical NA NA 985 None 563 7 0 FALSE 0 0 NA C coding 498 1494 85 1578 PB.6165.1 chr11 + 2742 11 novel_not_in_catalog TRIM22 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1057 None 2 9 3 TRUE 0 0 NA C coding 498 1494 157 1650 PB.8012.5 chr15 + 1287 1 incomplete-splice_match OIP5-AS1 ENST00000500949.6 8829 4 7533 10 no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6165.6 chr11 + 3121 4 novel_in_catalog TRIM22 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1832 None 2 15 0 FALSE 0 0 NA C coding 179 537 112 648 PB.6165.5 chr11 + 3103 8 novel_not_in_catalog TRIM22 novel NA NA NA NA no_subtype FALSE canonical NA NA 1142 None 2 13 0 TRUE 0 0 NA C coding 318 954 147 1100 PB.6165.4 chr11 + 3371 10 novel_not_in_catalog TRIM22 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1562 None 2 26 3 TRUE 0 0 NA C coding 309 927 1229 2155 PB.11193.2 chrX - 1602 9 novel_in_catalog TREX2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 112 None 2 3 0 FALSE 0 0 NA B coding 389 1167 5 1171 PB.6165.9 chr11 + 3206 9 novel_not_in_catalog TRIM22 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1488 None 2 11 2 TRUE 0 0 NA C coding 357 1071 1011 2081 PB.6165.8 chr11 + 2956 9 novel_not_in_catalog TRIM22 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1155 None 2 7 0 FALSE 0 0 NA C coding 413 1239 510 1748 PB.4976.1 chr8 + 1726 1 antisense novelGene_TCEB1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2796.1 chr4 + 3140 1 genic_intron novelGene_376 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5065.4 chr8 - 1736 1 genic_intron novelGene_973 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4561.1 chr7 + 1687 10 novel_not_in_catalog TRIP6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1410 None 12 1 0 TRUE 0 0 NA A coding 476 1428 112 1539 PB.5065.2 chr8 - 1437 15 novel_not_in_catalog EIF3E novel NA NA NA NA no_subtype TRUE non_canonical NA NA 20 None 2 1 0 TRUE 0 0 NA B coding 464 1392 26 1417 PB.5065.1 chr8 - 1359 13 novel_not_in_catalog EIF3E novel NA NA NA NA no_subtype FALSE non_canonical NA NA 105 None 113 1 1 FALSE 0 0 NA B coding 396 1188 163 1350 PB.816.1 chr1 + 2692 8 full-splice_match UHMK1 ENST00000489294.1 8478 8 227 5559 no_subtype FALSE canonical NA NA 1044 None 528 9 0 FALSE 0 0 NA C coding 288 864 325 1188 PB.2658.3 chr3 - 3245 2 novel_not_in_catalog BCL6 novel NA NA NA NA no_subtype FALSE canonical NA NA 601 None 2 12 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.11139.1 chrX + 2902 1 full-splice_match GLUD2 ENST00000328078.2 2493 1 116 -525 no_subtype FALSE canonical NA NA NA None 55 11 0 FALSE 0 0 NA A coding 490 1470 186 1655 PB.7413.2 chr13 - 3429 6 novel_not_in_catalog SLC46A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 454 None 3 32 1 TRUE 0 0 NA B coding 461 1383 635 2017 PB.4381.15 chr7 - 1414 6 fusion TRGC1,TRGV9 novel NA NA NA NA no_subtype FALSE canonical NA NA 108 None 2 1 1 TRUE 0 0 NA B coding 141 423 63 485 PB.5846.1 chr10 - 1776 13 full-splice_match ANXA7 ENST00000372921.9 2452 13 -9 685 no_subtype FALSE canonical NA NA 65 None 59 2 0 FALSE 0 0 NA C coding 466 1398 67 1464 PB.7413.1 chr13 - 2551 6 novel_not_in_catalog SLC46A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 474 None 4 20 0 FALSE 0 0 NA B coding 126 378 761 1138 PB.7503.2 chr13 + 2664 13 novel_not_in_catalog WDFY2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2271 None 5 11 1 TRUE 0 0 NA B coding 176 528 1771 2298 PB.3867.2 chr6 + 2701 14 novel_in_catalog ZNF76 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1863 None 4 8 0 FALSE 0 0 NA C coding 570 1710 256 1965 PB.6463.1 chr11 + 3368 17 full-splice_match BBS1 ENST00000318312.11 3423 17 38 17 no_subtype FALSE canonical NA NA 1708 None 5 18 0 FALSE 0 0 NA A coding 593 1779 14 1792 PB.7959.129 chr14 - 1485 8 fusion IGHV1-24,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 104 None 2 13 3 TRUE 0 0 NA A coding 461 1383 59 1441 PB.3867.1 chr6 + 2693 14 novel_not_in_catalog ZNF76 novel NA NA NA NA no_subtype FALSE canonical NA NA 1855 None 2 8 0 FALSE 0 0 NA C coding 560 1680 278 1957 PB.9339.1 chr17 + 3009 14 full-splice_match COG1 ENST00000299886.8 3079 14 66 4 no_subtype TRUE canonical NA NA 2819 None 41 2 0 FALSE 0 0 NA A coding 980 2940 15 2954 PB.7570.1 chr13 + 764 6 full-splice_match TNFSF13B ENST00000375887.8 2582 6 342 1476 no_subtype FALSE canonical NA NA 581 None 7 0 0 FALSE 0 0 NA A coding 78 234 458 691 PB.10639.2 chr22 + 4475 14 novel_not_in_catalog DGCR8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2635 None 2 10 2 FALSE 0 0 NA B coding 515 1545 458 2002 PB.10639.1 chr22 + 4125 16 novel_not_in_catalog DGCR8 novel NA NA NA NA no_subtype TRUE canonical NA NA 2632 None 8 9 0 TRUE 0 0 NA B coding 754 2262 449 2710 PB.6696.1 chr11 - 5562 6 full-splice_match NECTIN1 ENST00000264025.7 5840 6 266 12 no_subtype FALSE canonical NA NA 344 None 4 28 0 FALSE 0 0 NA C coding 479 1437 380 1816 PB.415.1 chr1 - 3444 2 genic MIR3671 novel NA NA NA NA no_subtype FALSE canonical NA NA 1532 None 2 26 1 FALSE 0 0 NA A coding 106 318 1687 2004 PB.2265.6 chr3 + 3840 15 novel_not_in_catalog FLNB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2965 None 2 8 1 TRUE 0 0 NA B coding 610 1830 557 2386 PB.7451.12 chr13 - 2872 2 genic_intron novelGene_408 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2674 None 2 34 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2265.1 chr3 + 6803 32 novel_not_in_catalog FLNB novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5930 None 2 10 1 TRUE 0 0 NA B coding 1661 4983 369 5351 PB.7451.10 chr13 - 3546 9 novel_not_in_catalog ELF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 74 None 17 7 1 TRUE 0 0 NA C coding 619 1857 305 2161 PB.7451.11 chr13 - 2736 5 novel_not_in_catalog ELF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 89 None 2 31 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.2310.1 chr3 + 1726 8 novel_in_catalog ROBO2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1064 None 2 6 0 FALSE 0 0 NA A coding 312 936 391 1326 PB.6447.1 chr11 - 1553 11 full-splice_match EFEMP2 ENST00000307998.10 2034 11 100 381 no_subtype FALSE canonical NA NA 124 None 9 2 0 FALSE 0 0 NA A coding 443 1329 132 1460 PB.469.5 chr1 - 1577 10 fusion GBP3,GBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 49 None 12 0 0 FALSE 0 0 NA B coding 503 1509 69 1577 PB.469.7 chr1 - 1503 9 fusion GBP3,GBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 51 None 6 1 0 FALSE 0 0 NA B coding 477 1431 71 1501 PB.469.9 chr1 - 1450 4 incomplete-splice_match GBP1 ENST00000370473.4 3035 11 1575 10 5prime_fragment FALSE canonical NA NA 13 None 3 4 1 FALSE 0 0 NA C coding 122 366 56 421 PB.9445.1 chr17 + 1757 16 novel_not_in_catalog ASPSCR1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1663 None 4 4 0 FALSE 0 0 NA B coding 543 1629 46 1674 PB.6650.1 chr11 + 2516 7 full-splice_match ZBTB16 ENST00000335953.8 2523 7 -42 49 no_subtype TRUE canonical NA NA 2214 None 2 0 0 FALSE 0 0 NA A coding 673 2019 423 2441 PB.2205.6 chr3 + 6146 22 novel_in_catalog RBM5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5521 None 2 18 0 FALSE 0 0 NA C coding 568 1704 3638 5341 PB.2205.7 chr3 + 3030 24 novel_in_catalog RBM5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2406 None 5 3 0 FALSE 0 0 NA C coding 568 1704 826 2529 PB.2205.4 chr3 + 3041 25 novel_not_in_catalog RBM5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2419 None 3 5 1 TRUE 0 0 NA C coding 643 1929 614 2542 PB.2205.5 chr3 + 5826 20 novel_in_catalog RBM5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 5207 None 3 19 0 FALSE 0 0 NA C coding 272 816 4515 5330 PB.2205.2 chr3 + 2649 5 full-splice_match RBM5 ENST00000469838.5 2716 5 51 16 no_subtype FALSE canonical NA NA 452 None 86 9 0 FALSE 0 0 NA C coding 143 429 114 542 PB.2205.3 chr3 + 2921 23 novel_in_catalog RBM5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2297 None 10 3 0 FALSE 0 0 NA C coding 756 2268 153 2420 PB.2205.1 chr3 + 3086 25 full-splice_match RBM5 ENST00000347869.7 3188 25 35 67 no_subtype FALSE canonical NA NA 2462 None 92 3 0 FALSE 0 0 NA C coding 815 2445 141 2585 PB.5005.1 chr8 - 3701 1 incomplete-splice_match MMP16 ENST00000286614.10 11558 10 7849 9 no_subtype FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9445.2 chr17 + 1777 16 novel_not_in_catalog ASPSCR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1684 None 12 5 1 FALSE 0 0 NA B coding 347 1041 18 1058 PB.6171.1 chr11 + 2400 6 full-splice_match SMPD1 ENST00000342245.8 2452 6 51 1 no_subtype TRUE canonical NA NA 1603 None 2 2 0 FALSE 0 0 NA C coding 631 1893 118 2010 PB.6171.2 chr11 + 2823 4 novel_in_catalog SMPD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2028 None 2 10 1 FALSE 0 0 NA C coding 492 1476 112 1587 PB.6171.3 chr11 + 3883 3 novel_in_catalog SMPD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3087 None 2 20 0 FALSE 0 0 NA C coding 396 1188 112 1299 PB.11135.3 chrX - 1788 1 novel_in_catalog LAMP2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8968.1 chr17 + 1777 7 full-splice_match TVP23B ENST00000307767.12 2064 7 279 8 no_subtype FALSE canonical NA NA 611 None 19 7 0 FALSE 0 0 NA C coding 205 615 21 635 PB.8968.2 chr17 + 2761 6 novel_not_in_catalog TVP23B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1589 None 2 28 3 TRUE 0 0 NA C non_coding NA NA NA NA PB.619.1 chr1 + 2803 1 full-splice_match RP11-289I10.2 ENST00000433527.1 519 1 -44 -2240 no_subtype FALSE canonical NA NA NA None 10 16 0 FALSE 0 0 NA A coding 172 516 45 560 PB.10585.1 chr21 - 1676 2 antisense novelGene_PKNOX1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 226 None 2 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8090.1 chr15 - 3411 27 novel_not_in_catalog MYO5C novel NA NA NA NA no_subtype TRUE canonical NA NA 159 None 2 2 0 TRUE 0 0 NA A coding 1093 3279 133 3411 PB.11135.5 chrX - 2650 10 novel_not_in_catalog LAMP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 191 None 8 7 0 TRUE 0 0 NA B coding 410 1230 128 1357 PB.3394.1 chr5 + 3826 1 novel_in_catalog RGMB novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9422.2 chr17 - 1593 13 novel_not_in_catalog EIF4A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 86 None 47 7 1 TRUE 0 0 NA A coding 405 1215 152 1366 PB.1693.1 chr2 + 4172 4 full-splice_match CYBRD1 ENST00000321348.8 4365 4 183 10 no_subtype FALSE canonical NA NA 572 None 53 13 0 FALSE 0 0 NA C coding 286 858 16 873 PB.91.2 chr1 + 2253 16 full-splice_match PADI4 ENST00000375448.4 2267 16 0 14 no_subtype FALSE canonical NA NA 1784 None 2 2 0 FALSE 0 0 NA C coding 663 1989 27 2015 PB.91.1 chr1 + 2834 10 novel_in_catalog PADI4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1075 None 3 3 0 FALSE 0 0 NA C coding 407 1221 29 1249 PB.7758.6 chr14 + 5919 11 novel_not_in_catalog PLEKHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5156 None 2 31 3 TRUE 0 0 NA B coding 213 639 1899 2537 PB.7758.7 chr14 + 5952 16 novel_in_catalog PLEKHG3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4590 None 3 6 0 FALSE 0 0 NA B coding 724 2172 3138 5309 PB.7758.2 chr14 + 5680 20 novel_not_in_catalog PLEKHG3 novel NA NA NA NA no_subtype TRUE canonical NA NA 4319 None 2 11 1 TRUE 0 0 NA B coding 1311 3933 1106 5038 PB.7758.3 chr14 + 2479 1 genic_intron novelGene_613 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7758.1 chr14 + 5850 16 novel_not_in_catalog PLEKHG3 novel NA NA NA NA no_subtype TRUE canonical NA NA 4492 None 3 4 0 FALSE 0 0 NA B coding 724 2172 3040 5211 PB.6339.2 chr11 + 3244 6 novel_not_in_catalog FAM111B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2755 None 2 5 0 TRUE 0 0 NA B coding 734 2202 327 2528 PB.6339.3 chr11 + 3152 6 novel_not_in_catalog FAM111B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3115 None 2 6 0 TRUE 0 0 NA B coding 734 2202 196 2397 PB.7758.8 chr14 + 5827 16 novel_not_in_catalog PLEKHG3 novel NA NA NA NA no_subtype FALSE canonical NA NA 4469 None 2 4 0 FALSE 0 0 NA B coding 724 2172 3017 5188 PB.6339.1 chr11 + 3135 5 novel_not_in_catalog FAM111B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2646 None 2 5 0 TRUE 0 0 NA B coding 734 2202 218 2419 PB.1962.1 chr2 + 2741 14 novel_not_in_catalog FARP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2698 None 7 7 0 TRUE 0 0 NA B coding 795 2385 142 2526 PB.3213.1 chr5 + 3822 24 novel_not_in_catalog EGFLAM novel NA NA NA NA no_subtype TRUE canonical NA NA 3112 None 4 3 0 TRUE 0 0 NA A coding 1009 3027 238 3264 PB.11053.1 chrX - 2568 3 full-splice_match CYSLTR1 ENST00000373304.3 2576 3 -54 62 no_subtype FALSE canonical NA NA 233 None 2 7 0 FALSE 0 0 NA C coding 337 1011 348 1358 PB.4133.1 chr6 - 1446 1 incomplete-splice_match STX7 ENST00000367941.6 15791 10 2588 11758 no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4133.2 chr6 - 3774 11 novel_not_in_catalog STX7 novel NA NA NA NA no_subtype FALSE canonical NA NA 110 None 28 22 0 TRUE 0 0 NA B coding 261 783 169 951 PB.9325.2 chr17 - 2052 5 novel_in_catalog SLC16A6 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 240 None 2 4 0 FALSE 0 0 NA A coding 523 1569 9 1577 PB.10599.1 chr21 + 2517 2 full-splice_match LRRC3 ENST00000291592.5 5869 2 19 3333 no_subtype FALSE canonical NA NA 151 None 2 18 0 FALSE 0 0 NA A coding 257 771 299 1069 PB.10625.1 chr22 - 1699 10 full-splice_match DGCR14 ENST00000252137.10 5392 10 27 3666 no_subtype FALSE canonical NA NA 152 None 9 1 0 FALSE 0 0 NA A coding 476 1428 18 1445 PB.628.1 chr1 + 1177 8 full-splice_match POLR3GL ENST00000369314.1 1165 8 -14 2 no_subtype FALSE canonical NA NA 691 None 3 0 0 FALSE 0 0 NA C coding 218 654 122 775 PB.8956.3 chr17 + 1448 1 incomplete-splice_match ALKBH5 ENST00000490106.1 2146 2 694 5 no_subtype FALSE canonical NA NA NA None 60 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8956.2 chr17 + 3048 4 full-splice_match ALKBH5 ENST00000399138.4 2748 4 -314 14 no_subtype FALSE canonical NA NA 1326 None 15 9 0 FALSE 0 0 NA C coding 394 1182 320 1501 PB.10778.3 chr22 - 1782 4 genic_intron novelGene_400 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 75 None 2 9 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.10778.2 chr22 - 1799 4 genic_intron novelGene_400 novel NA NA NA NA no_subtype TRUE canonical NA NA 75 None 4 11 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.10778.1 chr22 + 6255 25 novel_in_catalog TNRC6B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5324 None 2 8 0 FALSE 0 0 NA C coding 1812 5436 274 5709 PB.6506.17 chr11 - 7235 26 novel_not_in_catalog NUMA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 235 None 5 6 0 TRUE 0 0 NA B coding 2101 6303 273 6575 PB.7722.1 chr14 - 2694 19 full-splice_match DLGAP5 ENST00000247191.6 2973 19 93 186 no_subtype FALSE canonical NA NA 123 None 28 7 0 FALSE 0 0 NA A coding 846 2538 125 2662 PB.798.1 chr1 + 1670 1 full-splice_match RP11-312J18.5 ENST00000425270.1 1097 1 -91 -482 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA C coding 185 555 634 1188 PB.8657.1 chr16 + 4050 12 full-splice_match CDH5 ENST00000341529.7 4120 12 61 9 no_subtype FALSE canonical NA NA 1924 None 3 10 0 FALSE 0 0 NA A coding 784 2352 88 2439 PB.5430.1 chr9 - 2851 17 novel_not_in_catalog EPB41L4B novel NA NA NA NA no_subtype FALSE canonical NA NA 102 None 4 7 1 TRUE 0 0 NA A coding 369 1107 244 1350 PB.1116.2 chr1 - 2701 1 incomplete-splice_match EGLN1 ENST00000366641.3 7097 5 4385 12 no_subtype FALSE canonical NA NA NA None 3 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10492.1 chr20 - 1526 8 novel_not_in_catalog RGS19 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 22 None 3 7 0 TRUE 0 0 NA B coding 217 651 223 873 PB.6062.1 chr10 - 1352 11 full-splice_match NSMCE4A ENST00000369023.7 1394 11 25 17 no_subtype FALSE canonical NA NA 319 None 11 0 0 FALSE 0 0 NA A coding 385 1155 28 1182 PB.3651.2 chr5 + 2665 10 novel_not_in_catalog CREBRF novel NA NA NA NA no_subtype FALSE canonical NA NA 2229 None 2 3 0 TRUE 0 0 NA B coding 639 1917 290 2206 PB.5820.2 chr10 - 2945 7 full-splice_match SAR1A ENST00000373241.8 2996 7 31 20 no_subtype FALSE canonical NA NA 80 None 173 17 0 FALSE 0 0 NA C coding 198 594 97 690 PB.10492.2 chr20 - 1443 7 novel_not_in_catalog RGS19 novel NA NA NA NA no_subtype FALSE canonical NA NA 72 None 7 10 0 TRUE 0 0 NA B coding 217 651 141 791 PB.4051.4 chr6 - 1557 9 novel_not_in_catalog ATG5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 134 None 2 5 1 TRUE 0 0 NA C coding 197 591 352 942 PB.9556.1 chr18 + 5829 5 novel_not_in_catalog C18orf25 novel NA NA NA NA no_subtype FALSE canonical NA NA 5383 None 2 36 1 TRUE 0 0 NA A coding 341 1023 273 1295 PB.1800.1 chr2 - 3814 16 full-splice_match TRAK2 ENST00000332624.7 6510 16 50 2646 no_subtype FALSE canonical NA NA 180 None 85 0 0 FALSE 0 0 NA C coding 914 2742 380 3121 PB.7021.1 chr12 + 982 4 full-splice_match ORMDL2 ENST00000243045.9 2141 4 125 1034 no_subtype FALSE canonical NA NA 396 None 4 3 0 FALSE 0 0 NA A coding 153 459 71 529 PB.85.1 chr1 - 6145 11 novel_not_in_catalog FBXO42 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 204 None 2 32 1 TRUE 0 0 NA C coding 717 2151 222 2372 PB.85.3 chr1 - 2626 10 full-splice_match FBXO42 ENST00000375592.7 6202 10 12 3564 no_subtype FALSE canonical NA NA 188 None 2 4 0 FALSE 0 0 NA C coding 717 2151 206 2356 PB.9198.1 chr17 - 1539 5 full-splice_match MRPL10 ENST00000351111.6 1725 5 -10 196 no_subtype FALSE canonical NA NA 68 None 79 3 0 FALSE 0 0 NA A coding 261 783 17 799 PB.9481.1 chr18 - 3746 21 novel_not_in_catalog PPP4R1 novel NA NA NA NA no_subtype FALSE canonical NA NA 86 None 6 7 0 TRUE 0 0 NA A coding 933 2799 80 2878 PB.6324.1 chr11 - 2635 1 genic_intron novelGene_474 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 14 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9481.2 chr18 - 2828 4 genic_intron novelGene_67 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 667 None 5 19 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.9.1 chr1 - 2172 11 novel_not_in_catalog MXRA8 novel NA NA NA NA no_subtype FALSE canonical NA NA 88 None 3 9 1 TRUE 0 0 NA A coding 442 1326 40 1365 PB.11075.2 chrX + 1979 14 full-splice_match CSTF2 ENST00000372972.6 1958 14 -9 -12 no_subtype FALSE canonical NA NA 1762 None 8 0 0 FALSE 0 0 NA C coding 577 1731 26 1756 PB.3506.2 chr5 + 5628 3 genic_intron novelGene_1172 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4290 None 2 68 0 FALSE 0 0 NA A coding 103 309 2496 2804 PB.3506.7 chr5 - 1592 1 genic_intron novelGene_1173 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3415.1 chr5 + 5670 16 novel_in_catalog APC novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2273 None 2 12 0 FALSE 0 0 NA B coding 1768 5304 367 5670 PB.11129.4 chrX - 1810 9 novel_in_catalog SEPT6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 89 None 3 2 0 FALSE 0 0 NA C coding 427 1281 60 1340 PB.11129.5 chrX - 1515 7 novel_in_catalog SEPT6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 82 None 2 2 0 FALSE 0 0 NA C coding 267 801 53 853 PB.2302.10 chr3 - 2962 1 genic_intron novelGene_671 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 14 0 FALSE 0 0 NA A coding 104 312 1025 1336 PB.947.1 chr1 + 3534 7 full-splice_match NR5A2 ENST00000236914.7 3115 7 80 -499 no_subtype FALSE canonical NA NA 1394 None 4 5 0 FALSE 0 0 NA A coding 495 1485 155 1639 PB.11129.1 chrX - 1750 11 novel_in_catalog SEPT6 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 83 None 12 3 0 FALSE 0 0 NA C coding 427 1281 54 1334 PB.11129.3 chrX - 2110 11 full-splice_match SEPT6 ENST00000394610.5 4694 11 207 2377 no_subtype FALSE canonical NA NA 88 None 22 2 0 FALSE 0 0 NA C coding 427 1281 59 1339 PB.3933.1 chr6 + 4200 22 novel_not_in_catalog PTK7 novel NA NA NA NA no_subtype TRUE canonical NA NA 3209 None 15 6 0 TRUE 0 0 NA A coding 1070 3210 158 3367 PB.8177.5 chr15 - 3052 9 novel_not_in_catalog AAGAB novel NA NA NA NA no_subtype FALSE canonical NA NA 99 None 4 14 1 TRUE 0 0 NA C coding 280 840 27 866 PB.10490.1 chr20 - 1812 15 full-splice_match UCKL1 ENST00000354216.10 1837 15 5 20 no_subtype FALSE canonical NA NA 151 None 5 6 0 FALSE 0 0 NA C coding 548 1644 39 1682 PB.3237.2 chr5 - 1668 11 full-splice_match PAIP1 ENST00000436644.6 1734 11 38 28 no_subtype FALSE canonical NA NA 237 None 10 5 0 FALSE 0 0 NA C coding 400 1200 210 1409 PB.8177.1 chr15 - 3317 11 novel_not_in_catalog AAGAB novel NA NA NA NA no_subtype FALSE canonical NA NA 99 None 8 12 1 TRUE 0 0 NA C coding 315 945 27 971 PB.8177.2 chr15 - 3318 12 novel_not_in_catalog AAGAB novel NA NA NA NA no_subtype TRUE canonical NA NA 99 None 2 15 1 TRUE 0 0 NA C coding 189 567 27 593 PB.3237.1 chr5 - 2872 1 novel_in_catalog PAIP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5560.2 chr9 - 3000 16 novel_in_catalog CRAT novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 308 None 8 10 0 FALSE 0 0 NA C coding 627 1881 519 2399 PB.1845.13 chr2 - 4087 25 incomplete-splice_match FN1 ENST00000421182.5 8103 45 3589 427 5prime_fragment FALSE canonical NA NA 24 None 2 7 0 FALSE 0 0 NA C coding 958 2874 523 3396 PB.2066.1 chr3 + 3097 1 genic_intron novelGene_291 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A coding 112 336 1387 1722 PB.6992.1 chr12 - 2682 8 full-splice_match RARG ENST00000338561.9 1836 8 -87 -759 no_subtype FALSE canonical NA NA 397 None 13 4 0 FALSE 0 0 NA A coding 443 1329 247 1575 PB.6727.11 chr11 + 2697 2 genic_intron novelGene_1095 novel NA NA NA NA no_subtype TRUE canonical NA NA 487 None 15 19 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.10617.1 chr22 - 1287 9 full-splice_match ATP6V1E1 ENST00000253413.9 1402 9 76 39 no_subtype FALSE canonical NA NA 140 None 10 3 0 FALSE 0 0 NA A coding 226 678 108 785 PB.1659.1 chr2 - 3746 6 full-splice_match CD302 ENST00000259053.5 3741 6 -11 6 no_subtype FALSE canonical NA NA 122 None 8 34 0 FALSE 0 0 NA A coding 232 696 56 751 PB.6630.1 chr11 - 2762 1 antisense novelGene_ACAT1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11116.1 chrX + 4079 21 novel_not_in_catalog WDR44 novel NA NA NA NA no_subtype TRUE canonical NA NA 3014 None 6 6 0 TRUE 0 0 NA A coding 913 2739 368 3106 PB.1875.2 chr2 + 1492 1 incomplete-splice_match DNAJB2 ENST00000336576.9 3176 9 1682 3 no_subtype FALSE canonical NA NA NA None 5 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5715.2 chr10 - 5929 3 genic_intron novelGene_259 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5649 None 2 41 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10023.1 chr19 - 1817 14 full-splice_match POU2F2 ENST00000389341.9 6901 14 74 5010 no_subtype FALSE canonical NA NA 21 None 4 4 0 FALSE 0 0 NA C coding 458 1374 9 1382 PB.10023.2 chr19 - 1907 14 full-splice_match POU2F2 ENST00000526816.6 3218 14 -19 1330 no_subtype FALSE canonical NA NA 63 None 6 4 0 FALSE 0 0 NA C coding 479 1437 36 1472 PB.10023.3 chr19 - 3801 3 full-splice_match POU2F2 ENST00000558596.4 191 3 -1754 -1856 no_subtype FALSE canonical NA NA 1820 None 3 14 0 FALSE 0 0 NA C coding 115 345 2149 2493 PB.6668.1 chr11 - 1568 2 antisense novelGene_CD3G_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 647 None 5 12 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.4119.2 chr6 + 2869 4 antisense novelGene_PTPRK_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1986 None 2 18 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.6668.2 chr11 - 1564 3 antisense novelGene_CD3G_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 645 None 2 13 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.11230.1 chrY + 937 1 full-splice_match PSMA6P1 ENST00000400275.2 741 1 -58 -138 no_subtype FALSE canonical NA NA NA None 3 0 0 FALSE 0 0 NA A coding 164 492 305 796 PB.8647.3 chr16 + 1990 8 novel_not_in_catalog USB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1020 None 2 16 0 TRUE 0 0 NA B coding 265 795 46 840 PB.8647.1 chr16 + 1901 8 novel_not_in_catalog USB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 931 None 3 14 0 TRUE 0 0 NA B coding 214 642 106 747 PB.2484.2 chr3 - 1168 3 full-splice_match ANAPC13 ENST00000354910.9 1209 3 34 7 no_subtype FALSE canonical NA NA 41 None 6 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1940.5 chr2 + 5663 5 novel_not_in_catalog LRRFIP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 5551 None 2 47 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.10162.2 chr19 + 2828 18 novel_not_in_catalog CNOT3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2457 None 37 5 0 FALSE 0 0 NA B coding 753 2259 295 2553 PB.10162.3 chr19 + 3085 17 novel_in_catalog CNOT3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2314 None 2 6 0 FALSE 0 0 NA B coding 735 2205 278 2482 PB.1878.1 chr2 + 1639 10 novel_not_in_catalog DES novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1588 None 2 0 0 TRUE 0 0 NA C coding 470 1410 87 1496 PB.532.1 chr1 - 5596 3 genic_intron novelGene_982 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 255 None 2 44 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4626.1 chr7 + 2251 10 full-splice_match CAPZA2 ENST00000361183.7 5182 10 135 2796 no_subtype FALSE canonical NA NA 724 None 119 5 0 FALSE 0 0 NA C coding 286 858 5 862 PB.6777.1 chr12 + 1219 9 novel_not_in_catalog CD9 novel NA NA NA NA no_subtype FALSE canonical NA NA 723 None 28 8 0 TRUE 0 0 NA A coding 228 684 103 786 PB.9561.1 chr18 + 1583 1 genic_intron novelGene_488 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4626.2 chr7 + 2920 13 novel_not_in_catalog CAPZA2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2688 None 4 14 1 TRUE 0 0 NA C coding 286 858 12 869 PB.10011.1 chr19 + 1737 9 full-splice_match BCKDHA ENST00000269980.6 2103 9 360 6 no_subtype FALSE canonical NA NA 1175 None 39 1 0 FALSE 0 0 NA C coding 445 1335 9 1343 PB.2616.2 chr3 + 4301 3 novel_not_in_catalog B3GNT5 novel NA NA NA NA no_subtype FALSE canonical NA NA 410 None 4 24 0 TRUE 0 0 NA B coding 336 1008 838 1845 PB.10040.1 chr19 + 3225 7 novel_not_in_catalog ZNF234 novel NA NA NA NA no_subtype FALSE canonical NA NA 483 None 2 5 0 TRUE 0 0 NA A coding 700 2100 249 2348 PB.2344.1 chr3 + 1635 2 full-splice_match TRMT10C ENST00000309922.6 1819 2 27 157 no_subtype FALSE canonical NA NA 115 None 8 5 0 FALSE 0 0 NA A coding 403 1209 128 1336 PB.10827.2 chr22 + 4327 3 novel_in_catalog TTC38 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 141 None 2 37 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3574.2 chr5 + 953 1 incomplete-splice_match SLC26A2 ENST00000286298.4 8080 3 5914 1214 no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3574.1 chr5 + 2902 2 novel_not_in_catalog SLC26A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1062 None 2 20 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.11232.1 chrY - 2760 1 genic_intron novelGene_109 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7250.1 chr12 - 1187 5 full-splice_match VPS29 ENST00000360579.11 1091 5 -12 -84 no_subtype FALSE canonical NA NA 63 None 3 5 0 FALSE 0 0 NA A coding 186 558 61 618 PB.3112.1 chr4 - 1846 10 full-splice_match PPID ENST00000307720.3 1823 10 -31 8 no_subtype FALSE canonical NA NA 224 None 23 5 0 FALSE 0 0 NA A coding 370 1110 140 1249 PB.10278.1 chr20 - 1951 9 novel_not_in_catalog ESF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 678 None 2 4 0 TRUE 0 0 NA A coding 635 1905 45 1949 PB.2622.1 chr3 - 1419 10 novel_not_in_catalog PARL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 162 None 2 10 2 TRUE 0 0 NA C coding 188 564 649 1212 PB.6327.1 chr11 - 3627 1 full-splice_match APLNR ENST00000606794.1 3609 1 -21 3 no_subtype FALSE canonical NA NA NA None 13 12 0 FALSE 0 0 NA A coding 380 1140 219 1358 PB.2185.2 chr3 - 1589 13 novel_not_in_catalog IMPDH2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 146 None 2 3 1 FALSE 0 0 NA C coding 498 1494 49 1542 PB.1751.1 chr2 + 1583 6 novel_in_catalog INPP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 848 None 2 1 0 FALSE 0 0 NA A coding 399 1197 208 1404 PB.9337.1 chr17 + 3061 2 genic_intron novelGene_683 novel NA NA NA NA no_subtype FALSE canonical NA NA 30 None 2 12 1 FALSE 0 0 NA A coding 141 423 2016 2438 PB.1546.1 chr2 + 2782 20 novel_not_in_catalog TMEM87B novel NA NA NA NA no_subtype FALSE canonical NA NA 1814 None 2 9 0 TRUE 0 0 NA A coding 555 1665 207 1871 PB.7756.1 chr14 + 2616 2 novel_in_catalog ZBTB1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 151 None 7 2 0 FALSE 0 0 NA A coding 713 2139 170 2308 PB.288.1 chr1 - 2106 11 full-splice_match TRIT1 ENST00000316891.9 2112 11 2 4 no_subtype FALSE canonical NA NA 187 None 5 10 1 FALSE 0 0 NA A coding 467 1401 14 1414 PB.4994.1 chr8 - 2502 12 novel_not_in_catalog IMPA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 70 None 3 8 3 TRUE 0 0 NA A coding 277 831 95 925 PB.1878.3 chr2 + 1677 10 novel_not_in_catalog DES novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1627 None 2 3 1 TRUE 0 0 NA C coding 470 1410 81 1490 PB.3562.1 chr5 + 2702 17 incomplete-splice_match RBM27 ENST00000265271.6 6451 21 5 3744 3prime_fragment FALSE canonical NA NA 2687 None 20 0 0 FALSE 0 0 NA B coding 847 2541 162 2702 PB.5709.4 chr10 - 2926 10 full-splice_match PIP4K2A ENST00000376573.8 3802 10 120 756 no_subtype FALSE canonical NA NA 253 None 4 28 0 FALSE 0 0 NA C coding 406 1218 110 1327 PB.5709.3 chr10 - 3094 8 novel_not_in_catalog PIP4K2A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 155 None 3 31 1 TRUE 0 0 NA C coding 252 756 126 881 PB.5709.1 chr10 - 1608 1 incomplete-splice_match PIP4K2A ENST00000376573.8 3802 10 2069 126 no_subtype FALSE canonical NA NA NA None 5 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1995.2 chr3 + 2987 2 novel_not_in_catalog VHL novel NA NA NA NA no_subtype TRUE non_canonical NA NA 19 None 2 18 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.3029.3 chr4 - 1801 9 novel_not_in_catalog CCNA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 165 None 2 2 1 TRUE 0 0 NA B coding 432 1296 237 1532 PB.3029.2 chr4 - 2719 11 novel_not_in_catalog CCNA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 213 None 17 17 3 TRUE 0 0 NA B coding 432 1296 285 1580 PB.9410.4 chr17 - 3418 14 novel_in_catalog CYTH1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 215 None 13 9 0 FALSE 0 0 NA C coding 400 1200 188 1387 PB.5360.6 chr9 - 4418 16 novel_not_in_catalog SEMA4D novel NA NA NA NA no_subtype FALSE canonical NA NA 121 None 2 8 0 TRUE 0 0 NA B coding 851 2553 398 2950 PB.5709.8 chr10 - 5843 3 novel_not_in_catalog PIP4K2A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4781 None 6 34 0 TRUE 0 0 NA C coding 161 483 4449 4931 PB.5709.9 chr10 - 2146 2 genic_intron novelGene_214 novel NA NA NA NA no_subtype FALSE canonical NA NA 1251 None 2 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9399.1 chr17 - 3373 3 antisense novelGene_SEPT9_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2075 None 2 22 1 FALSE 0 0 NA A coding 129 387 117 503 PB.3785.5 chr6 - 3291 22 full-splice_match FAM65B ENST00000538035.5 5389 22 104 1994 no_subtype FALSE canonical NA NA 111 None 131 1 0 FALSE 0 0 NA C coding 1047 3141 51 3191 PB.5729.2 chr10 + 3513 9 full-splice_match ZEB1 ENST00000361642.9 5990 9 44 2433 no_subtype FALSE canonical NA NA 2804 None 26 1 0 FALSE 0 0 NA C coding 1125 3375 20 3394 PB.5729.3 chr10 + 1492 7 incomplete-splice_match ZEB1 ENST00000320985.14 5423 9 91 3840 3prime_fragment FALSE canonical NA NA 809 None 13 0 0 FALSE 0 0 NA C coding 491 1473 20 1492 PB.3785.1 chr6 - 3712 24 novel_not_in_catalog FAM65B novel NA NA NA NA no_subtype FALSE canonical NA NA 110 None 8 2 0 TRUE 0 0 NA C coding 1047 3141 50 3190 PB.5729.6 chr10 + 2683 8 incomplete-splice_match ZEB1 ENST00000361642.9 5990 9 55 3252 3prime_fragment FALSE canonical NA NA 2612 None 2 1 0 FALSE 0 0 NA C coding 891 2673 9 2681 PB.11055.1 chrX + 5423 4 genic GPR174 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 565 None 2 41 0 FALSE 0 0 NA A coding 333 999 1122 2120 PB.5298.1 chr9 + 2551 11 novel_not_in_catalog ZCCHC7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1243 None 10 6 0 TRUE 0 0 NA B coding 542 1626 49 1674 PB.6753.3 chr12 - 3741 22 incomplete-splice_match KDM5A ENST00000399788.6 10763 28 -111 7133 internal_fragment FALSE canonical NA NA 639 None 52 7 0 FALSE 0 0 NA B coding 1089 3267 475 3741 PB.986.3 chr1 + 5464 17 full-splice_match ZC3H11A ENST00000545588.5 7979 17 2518 -3 no_subtype FALSE canonical NA NA 3483 None 12 16 0 FALSE 0 0 NA C coding 810 2430 1310 3739 PB.5298.2 chr9 + 3760 8 novel_not_in_catalog ZCCHC7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1022 None 2 16 0 TRUE 0 0 NA B coding 340 1020 75 1094 PB.5298.4 chr9 + 2568 4 novel_not_in_catalog ZCCHC7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1264 None 2 30 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.2763.1 chr4 + 3188 22 novel_not_in_catalog NCAPG novel NA NA NA NA no_subtype FALSE canonical NA NA 2981 None 24 3 0 TRUE 0 0 NA A coding 1015 3045 58 3102 PB.6753.5 chr12 - 2873 19 incomplete-splice_match KDM5A ENST00000399788.6 10763 28 760 7130 internal_fragment FALSE canonical NA NA 140 None 2 0 0 FALSE 0 0 NA B coding 912 2736 138 2873 PB.8232.2 chr15 - 2961 1 novel_in_catalog PEAK1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9643.3 chr19 + 2010 14 novel_not_in_catalog DAZAP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1073 None 6 11 0 TRUE 0 0 NA B coding 407 1221 23 1243 PB.9643.2 chr19 + 1661 13 novel_not_in_catalog DAZAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1105 None 5 4 0 TRUE 0 0 NA B coding 406 1218 58 1275 PB.9643.5 chr19 + 7454 6 novel_not_in_catalog DAZAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 6515 None 3 38 0 FALSE 0 0 NA B coding 173 519 6167 6685 PB.9643.4 chr19 + 2887 1 novel_in_catalog DAZAP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5458.1 chr9 + 2667 14 full-splice_match ZNF618 ENST00000288466.11 9109 14 27 6415 no_subtype TRUE canonical NA NA 1141 None 2 1 1 FALSE 0 0 NA C coding 861 2583 73 2655 PB.5404.1 chr9 - 1813 2 full-splice_match ALG2 ENST00000476832.1 1880 2 62 5 no_subtype FALSE canonical NA NA 348 None 16 6 0 FALSE 0 0 NA A coding 416 1248 1 1248 PB.9410.3 chr17 - 3170 14 novel_not_in_catalog CYTH1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 66 None 3 8 0 TRUE 0 0 NA C coding 361 1083 45 1127 PB.3870.1 chr6 - 2436 3 genic_intron novelGene_346 novel NA NA NA NA no_subtype FALSE canonical NA NA 1287 None 4 20 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.11212.1 chrX - 1780 9 full-splice_match FAM3A ENST00000447601.6 1800 9 13 7 no_subtype FALSE canonical NA NA 467 None 4 10 0 FALSE 0 0 NA C coding 230 690 455 1144 PB.10461.2 chr20 - 3689 20 novel_not_in_catalog PPP4R1L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 15 None 6 8 1 TRUE 0 0 NA B coding 438 1314 1424 2737 PB.5317.1 chr9 - 1678 8 novel_in_catalog PTAR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 120 None 7 1 0 FALSE 0 0 NA B coding 401 1203 35 1237 PB.8661.1 chr16 + 1515 7 full-splice_match CA7 ENST00000338437.6 1555 7 39 1 no_subtype TRUE canonical NA NA 742 None 68 1 0 FALSE 0 0 NA A coding 264 792 71 862 PB.1457.5 chr2 - 2619 14 novel_in_catalog IMMT novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 113 None 7 4 0 FALSE 0 0 NA B coding 741 2223 69 2291 PB.5317.5 chr9 - 1559 1 novel_in_catalog PTAR1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9752.1 chr19 + 1544 2 antisense novelGene_S1PR2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 890 None 2 13 1 FALSE 0 0 NA A coding 124 372 1158 1529 PB.10242.1 chr20 - 2758 20 novel_not_in_catalog ADAM33 novel NA NA NA NA no_subtype FALSE canonical NA NA 148 None 4 5 1 FALSE 0 0 NA B coding 418 1254 52 1305 PB.2912.2 chr4 + 1954 6 full-splice_match ENOPH1 ENST00000509635.5 1874 6 -55 -25 no_subtype FALSE canonical NA NA 854 None 2 13 0 FALSE 0 0 NA C coding 173 519 473 991 PB.10242.3 chr20 - 2919 21 novel_not_in_catalog ADAM33 novel NA NA NA NA no_subtype TRUE canonical NA NA 145 None 2 8 0 FALSE 0 0 NA B coding 767 2301 49 2349 PB.10242.2 chr20 - 2902 22 novel_not_in_catalog ADAM33 novel NA NA NA NA no_subtype FALSE canonical NA NA 145 None 16 5 0 FALSE 0 0 NA B coding 804 2412 49 2460 PB.5973.2 chr10 + 5471 20 novel_not_in_catalog SLF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3624 None 6 14 0 FALSE 0 0 NA A coding 1172 3516 142 3657 PB.10937.1 chrX - 2917 5 genic_intron novelGene_466 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1527 None 4 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8011.1 chr15 + 3087 7 full-splice_match CHP1 ENST00000334660.9 3329 7 229 13 no_subtype FALSE canonical NA NA 545 None 98 19 0 FALSE 0 0 NA A coding 195 585 12 596 PB.6258.1 chr11 + 3082 12 novel_not_in_catalog TCP11L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2748 None 4 10 1 TRUE 0 0 NA B coding 509 1527 46 1572 PB.6258.2 chr11 + 3248 12 novel_not_in_catalog TCP11L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2914 None 2 17 2 TRUE 0 0 NA B coding 509 1527 212 1738 PB.10461.1 chr20 - 3504 20 novel_not_in_catalog PPP4R1L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 19 None 11 5 0 FALSE 0 0 NA B coding 438 1314 1561 2874 PB.842.5 chr1 + 3974 5 novel_not_in_catalog RCSD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2373 None 2 41 2 TRUE 0 0 NA C coding 77 231 166 396 PB.8286.1 chr15 - 5706 2 antisense novelGene_ZNF710_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 627 None 2 48 1 FALSE 0 0 NA A coding 443 1329 3580 4908 PB.257.1 chr1 + 1634 6 full-splice_match AGO3 ENST00000397828.3 1035 6 157 -756 no_subtype FALSE canonical NA NA 846 None 5 6 0 FALSE 0 0 NA A coding 204 612 264 875 PB.1745.1 chr2 + 2395 6 full-splice_match ASNSD1 ENST00000260952.8 2450 6 53 2 no_subtype FALSE canonical NA NA 2006 None 2 5 0 FALSE 0 0 NA A coding 643 1929 361 2289 PB.4904.2 chr8 + 3025 21 novel_in_catalog HOOK3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2075 None 4 2 0 FALSE 0 0 NA C coding 675 2025 132 2156 PB.6078.1 chr10 + 2956 9 full-splice_match FAM175B ENST00000298492.5 2992 9 28 8 no_subtype FALSE canonical NA NA 795 None 35 6 0 FALSE 0 0 NA A coding 415 1245 18 1262 PB.88.1 chr1 - 2764 2 genic EIF1AXP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2524 None 2 24 1 FALSE 0 0 NA C coding 144 432 176 607 PB.4904.1 chr8 + 2601 22 full-splice_match HOOK3 ENST00000307602.8 14398 22 84 11713 no_subtype FALSE canonical NA NA 2132 None 21 2 0 FALSE 0 0 NA C coding 718 2154 117 2270 PB.3884.2 chr6 - 3490 14 novel_not_in_catalog STK38 novel NA NA NA NA no_subtype FALSE canonical NA NA 205 None 129 6 0 FALSE 0 0 NA B coding 444 1332 271 1602 PB.3556.3 chr5 + 3600 19 novel_in_catalog ARHGAP26 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1809 None 2 5 0 FALSE 0 0 NA C coding 567 1701 195 1895 PB.3556.1 chr5 + 3276 23 full-splice_match ARHGAP26 ENST00000378004.7 9200 23 99 5825 no_subtype FALSE canonical NA NA 2447 None 5 4 0 FALSE 0 0 NA C coding 759 2277 257 2533 PB.3884.6 chr6 - 2005 1 novel_in_catalog STK38 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3884.7 chr6 - 6110 9 novel_in_catalog STK38 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 259 None 2 39 1 FALSE 0 0 NA B coding 264 792 328 1119 PB.3556.5 chr5 + 3329 2 genic_intron novelGene_1198 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 28 None 21 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1878.4 chr2 + 1652 8 novel_in_catalog DES novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 874 None 5 1 0 FALSE 0 0 NA C coding 208 624 290 913 PB.6991.17 chr12 - 3182 14 novel_in_catalog ITGB7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 50 None 2 9 0 FALSE 0 0 NA C coding 586 1758 177 1934 PB.9768.1 chr19 + 1303 10 full-splice_match QTRT1 ENST00000250237.9 1317 10 3 11 no_subtype FALSE canonical NA NA 1066 None 2 2 0 FALSE 0 0 NA A coding 403 1209 8 1216 PB.6359.1 chr11 - 2698 6 novel_not_in_catalog VPS37C novel NA NA NA NA no_subtype FALSE canonical NA NA 68 None 7 7 0 TRUE 0 0 NA B coding 355 1065 75 1139 PB.1439.2 chr2 - 2867 8 novel_in_catalog SUCLG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 67 None 2 22 0 FALSE 0 0 NA C coding 358 1074 10 1083 PB.6359.3 chr11 - 2819 7 novel_not_in_catalog VPS37C novel NA NA NA NA no_subtype TRUE canonical NA NA 67 None 2 8 0 TRUE 0 0 NA B coding 355 1065 193 1257 PB.2711.1 chr4 - 2183 11 full-splice_match NELFA ENST00000411638.6 2199 11 7 9 no_subtype FALSE canonical NA NA 219 None 8 5 0 FALSE 0 0 NA A coding 528 1584 10 1593 PB.9387.2 chr17 - 3497 19 novel_in_catalog RHBDF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 63 None 39 5 0 FALSE 0 0 NA B coding 827 2481 283 2763 PB.10156.3 chr19 - 2498 4 novel_not_in_catalog ZNF611 novel NA NA NA NA no_subtype FALSE canonical NA NA 83 None 2 9 0 TRUE 0 0 NA A coding 705 2115 21 2135 PB.10156.2 chr19 - 2633 6 novel_not_in_catalog ZNF83 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 89 None 2 12 4 TRUE 0 0 NA A coding 318 954 519 1472 PB.9147.2 chr17 + 1757 1 incomplete-splice_match AOC3 ENST00000617500.4 2392 4 626 10 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.177.1 chr1 - 2104 7 full-splice_match GPATCH3 ENST00000361720.9 2123 7 17 2 no_subtype FALSE canonical NA NA 458 None 4 7 0 FALSE 0 0 NA C coding 525 1575 8 1582 PB.3015.1 chr4 + 2647 11 full-splice_match METTL14 ENST00000388822.9 6669 11 35 3987 no_subtype FALSE canonical NA NA 1198 None 32 16 0 FALSE 0 0 NA A coding 456 1368 133 1500 PB.177.2 chr1 - 2726 5 novel_in_catalog GPATCH3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 355 None 2 19 1 FALSE 0 0 NA C coding 292 876 262 1137 PB.8889.2 chr17 - 2964 15 full-splice_match DVL2 ENST00000005340.9 3018 15 52 2 no_subtype FALSE canonical NA NA 425 None 20 4 0 FALSE 0 0 NA C coding 736 2208 232 2439 PB.8889.1 chr17 - 2985 15 novel_in_catalog DVL2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 459 None 9 3 0 FALSE 0 0 NA C coding 732 2196 266 2461 PB.5111.2 chr8 + 1640 1 genic_intron novelGene_1087 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 11 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6837.1 chr12 + 3558 4 full-splice_match CREBL2 ENST00000228865.2 3754 4 189 7 no_subtype FALSE canonical NA NA 450 None 6 17 0 FALSE 0 0 NA A coding 120 360 93 452 PB.4371.4 chr7 + 2275 13 novel_not_in_catalog SEPT7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 989 None 2 12 0 TRUE 0 0 NA C coding 376 1128 49 1176 PB.4371.5 chr7 + 2314 14 novel_not_in_catalog SEPT7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1263 None 4 5 0 FALSE 0 0 NA C coding 384 1152 149 1300 PB.4371.6 chr7 + 3353 12 novel_in_catalog SEPT7 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 1125 None 2 13 0 FALSE 0 0 NA C coding 406 1218 49 1266 PB.6959.11 chr12 + 2740 1 novel_in_catalog TMBIM6 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.11142.2 chrX - 3482 28 incomplete-splice_match THOC2 ENST00000355725.8 4930 39 7 1441 internal_fragment FALSE canonical NA NA 98 None 2 0 0 FALSE 0 0 NA B coding 1151 3453 28 3480 PB.9305.21 chr17 - 3626 12 novel_not_in_catalog DDX5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 214 None 9 15 1 TRUE 0 0 NA C coding 406 1218 171 1388 PB.746.2 chr1 - 2774 14 novel_not_in_catalog CCT3 novel NA NA NA NA no_subtype FALSE canonical NA NA 94 None 2 6 0 FALSE 0 0 NA B coding 396 1188 64 1251 PB.9305.23 chr17 - 2942 10 novel_not_in_catalog DDX5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 20 None 2 12 2 TRUE 0 0 NA C coding 154 462 336 797 PB.4252.3 chr6 + 3153 4 novel_not_in_catalog CCR6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 256 None 2 15 0 TRUE 0 0 NA C coding 374 1122 248 1369 PB.7.3 chr1 - 2548 16 novel_in_catalog CPSF3L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 57 None 2 10 0 FALSE 0 0 NA C coding 518 1554 742 2295 PB.5307.1 chr9 + 2603 3 novel_not_in_catalog ALDH1B1 novel NA NA NA NA no_subtype FALSE canonical NA NA 74 None 7 6 0 TRUE 0 0 NA B coding 517 1551 76 1626 PB.7.1 chr1 - 2096 17 full-splice_match CPSF3L ENST00000435064.5 2148 17 48 4 no_subtype FALSE canonical NA NA 63 None 20 6 0 FALSE 0 0 NA C coding 600 1800 36 1835 PB.167.3 chr1 + 1470 3 novel_in_catalog DHDDS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 223 None 2 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3009.1 chr4 + 3504 3 novel_not_in_catalog ALPK1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1081 None 2 21 1 TRUE 0 0 NA B coding 117 351 1179 1529 PB.167.1 chr1 + 1452 9 novel_in_catalog DHDDS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 940 None 23 2 0 FALSE 0 0 NA B coding 334 1002 176 1177 PB.528.1 chr1 - 3444 10 full-splice_match SLC25A24 ENST00000565488.5 4271 10 34 793 no_subtype FALSE canonical NA NA 369 None 59 6 0 FALSE 0 0 NA C coding 477 1431 187 1617 PB.528.3 chr1 - 3439 12 novel_not_in_catalog SLC25A24 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 388 None 3 8 2 TRUE 0 0 NA C coding 477 1431 206 1636 PB.8005.1 chr15 + 2085 10 incomplete-splice_match SPINT1 ENST00000344051.8 3056 11 191 780 internal_fragment TRUE canonical NA NA 1427 None 5 2 0 FALSE 0 0 NA A coding 523 1569 62 1630 PB.8895.1 chr17 + 1235 6 full-splice_match EIF5A ENST00000336458.12 1511 6 271 5 no_subtype FALSE canonical NA NA 606 None 7 5 0 FALSE 0 0 NA A coding 154 462 131 592 PB.7870.1 chr14 - 2660 2 antisense novelGene_SLC24A4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1329 None 2 9 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3423.1 chr5 + 2918 1 genic_intron novelGene_1025 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 10 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11080.1 chrX - 1434 1 novel_in_catalog TIMM8A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A coding 98 294 61 354 PB.10777.8 chr22 + 2553 13 incomplete-splice_match TNRC6B ENST00000402203.5 3444 24 1315 -424 internal_fragment FALSE canonical NA NA 1622 None 3 6 0 FALSE 0 0 NA C coding 666 1998 10 2007 PB.1848.2 chr2 + 3130 19 novel_not_in_catalog SMARCAL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2820 None 2 5 2 TRUE 0 0 NA B coding 650 1950 1108 3057 PB.10832.1 chr22 - 1765 1 incomplete-splice_match CERK ENST00000216264.12 4450 13 2011 675 no_subtype FALSE canonical NA NA NA None 9 8 0 FALSE 0 0 NA C coding 201 603 251 853 PB.7033.6 chr12 - 3658 28 novel_in_catalog SMARCC2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 130 None 13 1 0 FALSE 0 0 NA C coding 1099 3297 20 3316 PB.2591.7 chr3 + 6185 4 genic_intron novelGene_1320 novel NA NA NA NA no_subtype FALSE canonical NA NA 3600 None 2 55 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.10725.1 chr22 - 5412 3 antisense novelGene_TOM1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2760 None 2 36 2 FALSE 0 0 NA A coding 118 354 4403 4756 PB.2834.1 chr4 - 5914 2 genic_intron novelGene_478 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4423 None 3 25 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7033.7 chr12 - 4394 27 novel_in_catalog SMARCC2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 139 None 2 19 1 FALSE 0 0 NA C coding 872 2616 1435 4050 PB.9568.1 chr18 + 2652 16 full-splice_match ME2 ENST00000321341.9 9100 16 78 6370 no_subtype FALSE canonical NA NA 1781 None 25 3 0 FALSE 0 0 NA A coding 584 1752 195 1946 PB.3424.1 chr5 - 2798 1 incomplete-splice_match PGGT1B ENST00000419445.5 9545 9 1936 4812 no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7153.3 chr12 - 1745 3 genic_intron novelGene_845 novel NA NA NA NA no_subtype FALSE canonical NA NA 1200 None 5 17 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.7153.2 chr12 + 1789 3 genic_intron novelGene_844 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 583 None 6 15 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.1718.1 chr2 - 1648 5 full-splice_match NFE2L2 ENST00000397062.7 2853 5 448 757 no_subtype FALSE canonical NA NA 152 None 14 1 0 FALSE 0 0 NA C coding 513 1539 108 1646 PB.10832.4 chr22 - 2609 4 incomplete-splice_match CERK ENST00000216264.12 4450 13 1165 676 5prime_fragment FALSE canonical NA NA 74 None 2 8 0 FALSE 0 0 NA C coding 142 426 134 559 PB.3348.1 chr5 - 1649 1 novel_in_catalog SERINC5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.494.1 chr1 + 4031 15 full-splice_match FNBP1L ENST00000370253.6 3889 15 -149 7 no_subtype FALSE canonical NA NA 1785 None 2 15 0 FALSE 0 0 NA A coding 547 1641 150 1790 PB.10344.2 chr20 - 1879 11 full-splice_match EDEM2 ENST00000374492.7 1919 11 25 15 no_subtype FALSE canonical NA NA 188 None 15 0 0 FALSE 0 0 NA C coding 578 1734 82 1815 PB.7672.2 chr14 + 2941 25 novel_in_catalog CTAGE5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2349 None 7 3 0 FALSE 0 0 NA C coding 813 2439 75 2513 PB.7672.1 chr14 + 2907 24 full-splice_match CTAGE5 ENST00000280083.7 3860 24 247 706 no_subtype FALSE canonical NA NA 2315 None 34 3 0 FALSE 0 0 NA C coding 804 2412 68 2479 PB.10344.1 chr20 - 1769 10 full-splice_match EDEM2 ENST00000374491.3 1756 10 -21 8 no_subtype FALSE canonical NA NA 189 None 2 2 0 FALSE 0 0 NA C coding 541 1623 83 1705 PB.10827.1 chr22 + 3321 15 novel_not_in_catalog TTC38 novel NA NA NA NA no_subtype FALSE canonical NA NA 2961 None 160 18 1 TRUE 0 0 NA B coding 469 1407 14 1420 PB.2814.4 chr4 + 2741 6 novel_not_in_catalog RHOH novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2534 None 6 4 0 TRUE 0 0 NA C coding 191 573 587 1159 PB.10827.3 chr22 + 3257 14 novel_not_in_catalog TTC38 novel NA NA NA NA no_subtype FALSE canonical NA NA 2892 None 3 21 1 TRUE 0 0 NA B coding 420 1260 19 1278 PB.3569.1 chr5 + 3208 1 novel_in_catalog CARMN novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 14 0 FALSE 0 0 NA C coding 141 423 982 1404 PB.2814.9 chr4 + 1602 2 novel_in_catalog RHOH novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 124 None 2 1 0 FALSE 0 0 NA C coding 191 573 334 906 PB.10731.2 chr22 - 1472 5 novel_not_in_catalog TXN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 54 None 2 9 0 FALSE 0 0 NA B coding 166 498 217 714 PB.1304.5 chr2 - 3948 1 novel_in_catalog THADA novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 34 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10731.1 chr22 - 1667 5 novel_not_in_catalog TXN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 264 None 2 13 0 TRUE 0 0 NA B coding 166 498 412 909 PB.5672.1 chr10 + 2380 6 full-splice_match GATA3 ENST00000346208.3 2654 6 -118 392 no_subtype FALSE canonical NA NA 1620 None 3 3 0 FALSE 0 0 NA A coding 443 1329 574 1902 PB.4111.1 chr6 + 1740 9 novel_not_in_catalog SMPDL3A novel NA NA NA NA no_subtype TRUE canonical NA NA 1115 None 62 3 0 TRUE 0 0 NA A coding 453 1359 72 1430 PB.1304.1 chr2 - 6109 39 novel_in_catalog THADA novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 82 None 8 6 0 FALSE 0 0 NA B coding 1953 5859 154 6012 PB.1861.3 chr2 + 1015 1 incomplete-splice_match CNOT9 ENST00000273064.10 4079 8 2406 659 no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3512.1 chr5 + 3965 15 novel_in_catalog MATR3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2901 None 17 6 1 FALSE 0 0 NA C coding 895 2685 265 2949 PB.7348.1 chr12 - 2952 4 novel_not_in_catalog VPS37B novel NA NA NA NA no_subtype FALSE canonical NA NA 89 None 17 16 0 TRUE 0 0 NA C coding 239 717 452 1168 PB.3451.1 chr5 + 1678 9 full-splice_match PRRC1 ENST00000296666.12 4699 9 62 2959 no_subtype FALSE canonical NA NA 1254 None 11 3 0 FALSE 0 0 NA C coding 445 1335 127 1461 PB.7348.3 chr12 - 2679 4 novel_not_in_catalog VPS37B novel NA NA NA NA no_subtype FALSE canonical NA NA 158 None 98 19 1 FALSE 0 0 NA C coding 105 315 48 362 PB.2128.1 chr3 - 2625 14 novel_not_in_catalog ANO10 novel NA NA NA NA no_subtype FALSE canonical NA NA 89 None 16 5 0 TRUE 0 0 NA B coding 660 1980 101 2080 PB.115.1 chr1 - 2642 1 incomplete-splice_match ECE1 ENST00000415912.6 5099 19 2450 8 no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA C coding 128 384 1800 2183 PB.7348.4 chr12 - 2710 4 novel_not_in_catalog VPS37B novel NA NA NA NA no_subtype FALSE canonical NA NA 183 None 2 20 0 FALSE 0 0 NA C coding 239 717 211 927 PB.115.2 chr1 - 2697 19 full-splice_match ECE1 ENST00000374893.10 2484 19 37 -250 no_subtype FALSE canonical NA NA 89 None 3 3 0 FALSE 0 0 NA C coding 770 2310 39 2348 PB.946.24 chr1 + 4319 32 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3235 None 3 15 0 TRUE 0 0 NA B coding 1145 3435 74 3508 PB.7316.1 chr12 + 4393 5 full-splice_match UNC119B ENST00000344651.4 4404 5 5 6 no_subtype FALSE canonical NA NA 678 None 7 18 0 FALSE 0 0 NA C coding 251 753 36 788 PB.20.1 chr1 + 2794 15 full-splice_match ARHGEF16 ENST00000378378.8 3061 15 261 6 no_subtype FALSE canonical NA NA 2134 None 13 6 0 FALSE 0 0 NA A coding 709 2127 145 2271 PB.3615.20 chr5 + 2615 3 novel_not_in_catalog CYFIP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2223 None 3 11 1 FALSE 0 0 NA C coding 122 366 1560 1925 PB.850.1 chr1 + 2219 6 novel_not_in_catalog ATP1B1 novel NA NA NA NA no_subtype FALSE canonical NA NA 794 None 17 4 1 FALSE 0 0 NA A coding 194 582 143 724 PB.946.21 chr1 + 2491 26 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE canonical NA NA 2453 None 2 2 0 TRUE 0 0 NA B coding 801 2403 87 2489 PB.8071.1 chr15 + 1432 1 antisense novelGene_SECISBP2L_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10777.5 chr22 + 5873 22 novel_in_catalog TNRC6B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5154 None 3 4 0 FALSE 0 0 NA C coding 1776 5328 212 5539 PB.30.1 chr1 - 3060 8 novel_not_in_catalog TNFRSF25 novel NA NA NA NA no_subtype FALSE canonical NA NA 713 None 2 20 1 TRUE 0 0 NA A coding 177 531 2268 2798 PB.9675.1 chr19 - 2798 1 incomplete-splice_match PIP5K1C ENST00000335312.7 5080 18 2282 1 no_subtype FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA A coding 206 618 1223 1840 PB.6040.1 chr10 + 5636 17 full-splice_match FAM160B1 ENST00000369248.8 5810 17 166 8 no_subtype FALSE canonical NA NA 2361 None 14 25 0 FALSE 0 0 NA A coding 765 2295 170 2464 PB.2128.4 chr3 - 3486 12 novel_in_catalog ANO10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 44 None 2 10 0 FALSE 0 0 NA B coding 650 1950 56 2005 PB.10539.4 chr21 + 4114 1 full-splice_match SON ENST00000290239.7 67 1 -148 -3899 no_subtype FALSE canonical NA NA NA None 4 0 0 FALSE 0 0 NA C coding 1338 4014 99 4112 PB.10539.5 chr21 + 7483 10 incomplete-splice_match SON ENST00000356577.8 8813 12 1324 6 internal_fragment FALSE canonical NA NA 6372 None 2 13 0 FALSE 0 0 NA C coding 2137 6411 19 6429 PB.10539.6 chr21 + 3383 10 full-splice_match SON ENST00000436227.5 5269 10 1879 7 no_subtype FALSE canonical NA NA 2326 None 7 6 0 FALSE 0 0 NA C coding 819 2457 26 2482 PB.2853.1 chr4 + 1357 4 full-splice_match REST ENST00000619101.4 7114 4 97 5660 no_subtype TRUE canonical NA NA 1021 None 7 0 0 FALSE 0 0 NA C coding 439 1317 40 1356 PB.10539.1 chr21 + 5695 3 incomplete-splice_match SON ENST00000300278.8 7477 7 41 1741 3prime_fragment FALSE canonical NA NA 232 None 8 0 0 FALSE 0 0 NA C coding 1709 5127 568 5694 PB.10539.2 chr21 + 3423 2 novel_in_catalog SON novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3327 None 2 28 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10539.3 chr21 + 1418 1 novel_in_catalog SON novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.440.2 chr1 - 4299 25 novel_not_in_catalog USP33 novel NA NA NA NA no_subtype FALSE canonical NA NA 188 None 4 8 1 TRUE 0 0 NA B coding 911 2733 240 2972 PB.5901.1 chr10 + 2887 2 full-splice_match IFIT2 ENST00000371826.3 3489 2 94 508 no_subtype FALSE canonical NA NA 80 None 449 13 0 FALSE 0 0 NA C coding 472 1416 76 1491 PB.5901.2 chr10 + 3905 6 fusion IFIT3,IFIT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3525 None 2 5 0 TRUE 0 0 NA A coding 472 1416 77 1492 PB.440.1 chr1 - 4259 25 novel_not_in_catalog USP33 novel NA NA NA NA no_subtype FALSE canonical NA NA 172 None 7 4 0 TRUE 0 0 NA B coding 903 2709 224 2932 PB.6343.1 chr11 - 3960 2 genic MPEG1 novel NA NA NA NA no_subtype FALSE canonical NA NA 120 None 5 19 1 FALSE 0 0 NA C coding 716 2148 181 2328 PB.10904.2 chrX + 1650 12 full-splice_match PDK3 ENST00000441463.2 1921 12 -197 468 no_subtype FALSE canonical NA NA 1414 None 3 0 0 FALSE 0 0 NA C coding 415 1245 198 1442 PB.6343.3 chr11 - 3946 2 genic MPEG1 novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 2 19 1 FALSE 0 0 NA C coding 716 2148 164 2311 PB.6343.2 chr11 - 2476 1 full-splice_match MPEG1 ENST00000361050.3 4442 1 82 1884 no_subtype FALSE canonical NA NA NA None 111 3 0 FALSE 0 0 NA C coding 716 2148 5 2152 PB.8136.5 chr15 - 6089 34 incomplete-splice_match HERC1 ENST00000443617.6 15137 78 9041 7 5prime_fragment FALSE canonical NA NA 217 None 2 0 0 FALSE 0 0 NA B coding 1867 5601 30 5630 PB.8136.4 chr15 - 3613 19 novel_in_catalog HERC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 176 None 2 0 0 FALSE 0 0 NA B coding 1016 3048 105 3152 PB.10421.1 chr20 - 3162 8 full-splice_match NCOA5 ENST00000290231.10 3220 8 39 19 no_subtype FALSE canonical NA NA 97 None 12 8 0 FALSE 0 0 NA C coding 579 1737 127 1863 PB.10904.3 chrX + 2804 12 novel_not_in_catalog PDK3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1229 None 2 7 0 TRUE 0 0 NA C coding 406 1218 153 1370 PB.1652.3 chr2 + 3118 1 novel_in_catalog GPD2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA B coding 18 54 278 331 PB.7143.1 chr12 - 1742 1 antisense novelGene_TMTC3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1652.1 chr2 + 2685 7 novel_not_in_catalog GPD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1967 None 4 8 1 TRUE 0 0 NA B coding 222 666 169 834 PB.9640.3 chr19 + 2724 4 incomplete-splice_match MIDN ENST00000300952.6 3790 8 1056 10 internal_fragment FALSE canonical NA NA 588 None 2 25 0 FALSE 0 0 NA B coding 235 705 159 863 PB.5834.2 chr10 - 1464 10 novel_not_in_catalog ASCC1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 179 None 3 4 1 TRUE 0 0 NA A coding 357 1071 183 1253 PB.1324.1 chr2 - 1078 6 full-splice_match CALM2 ENST00000272298.11 1302 6 90 134 no_subtype FALSE canonical NA NA 71 None 50 1 0 FALSE 0 0 NA A coding 149 447 69 515 PB.2170.1 chr3 - 1524 4 novel_in_catalog CCDC51 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 41 None 2 2 0 FALSE 0 0 NA C coding 411 1233 50 1282 PB.1636.2 chr2 + 3040 2 genic_intron novelGene_1228 novel NA NA NA NA no_subtype FALSE canonical NA NA 2705 None 4 18 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.6653.6 chr11 + 1671 2 full-splice_match REXO2 ENST00000543243.1 552 2 8 -1127 no_subtype FALSE canonical NA NA 173 None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.208.1 chr1 + 5707 18 novel_in_catalog EPB41 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2499 None 16 27 0 FALSE 0 0 NA B coding 601 1803 688 2490 PB.208.2 chr1 + 5779 19 novel_in_catalog EPB41 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2574 None 26 29 0 FALSE 0 0 NA B coding 622 1866 700 2565 PB.208.3 chr1 + 2830 13 novel_not_in_catalog EPB41 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2163 None 2 7 0 TRUE 0 0 NA B coding 426 1278 705 1982 PB.208.4 chr1 + 5633 17 novel_in_catalog EPB41 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2414 None 3 30 0 FALSE 0 0 NA B coding 567 1701 705 2405 PB.208.5 chr1 + 6189 20 novel_not_in_catalog EPB41 novel NA NA NA NA no_subtype FALSE canonical NA NA 2980 None 2 33 2 FALSE 0 0 NA B coding 759 2277 695 2971 PB.208.6 chr1 + 5713 18 novel_in_catalog EPB41 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2498 None 13 27 0 FALSE 0 0 NA B coding 810 2430 60 2489 PB.208.7 chr1 + 5730 17 novel_in_catalog EPB41 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2515 None 5 27 0 FALSE 0 0 NA B coding 767 2301 206 2506 PB.208.8 chr1 + 2950 13 novel_not_in_catalog EPB41 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2293 None 2 10 0 TRUE 0 0 NA B coding 635 1905 208 2112 PB.208.9 chr1 + 5763 17 novel_in_catalog EPB41 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2538 None 2 27 0 FALSE 0 0 NA B coding 776 2328 202 2529 PB.4718.9 chr7 + 3212 2 antisense novelGene_KIAA1147_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3119 None 6 12 0 FALSE 0 0 NA B coding 111 333 1692 2024 PB.2170.2 chr3 - 1638 4 full-splice_match CCDC51 ENST00000395694.6 1560 4 -87 9 no_subtype FALSE canonical NA NA 165 None 5 1 0 FALSE 0 0 NA C coding 411 1233 174 1406 PB.2510.1 chr3 + 3649 17 novel_not_in_catalog PLS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1865 None 34 21 0 FALSE 0 0 NA C coding 629 1887 112 1998 PB.1894.1 chr2 - 2671 2 genic_intron novelGene_1405 novel NA NA NA NA no_subtype FALSE canonical NA NA 274 None 2 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4744.1 chr7 - 2925 4 novel_not_in_catalog GIMAP6 novel NA NA NA NA no_subtype FALSE canonical NA NA 186 None 374 9 1 TRUE 0 0 NA B coding 292 876 187 1062 PB.4729.3 chr7 + 2913 21 novel_in_catalog CUL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2412 None 215 1 0 FALSE 0 0 NA B coding 776 2328 163 2490 PB.5319.1 chr9 + 5906 24 novel_in_catalog SMC5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 3231 None 5 17 0 FALSE 0 0 NA A coding 1086 3258 112 3369 PB.741.6 chr1 + 4043 9 novel_in_catalog LMNA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2401 None 3 21 0 FALSE 0 0 NA C coding 396 1188 206 1393 PB.5319.3 chr9 + 1535 1 genic_intron novelGene_662 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.309.1 chr1 - 2574 10 full-splice_match SLC2A1 ENST00000426263.7 3667 10 305 788 no_subtype FALSE canonical NA NA 235 None 3 2 0 FALSE 0 0 NA A coding 492 1476 218 1693 PB.7916.4 chr14 - 1386 3 full-splice_match DEGS2 ENST00000305631.6 4352 3 500 2466 no_subtype FALSE canonical NA NA 158 None 8 2 0 FALSE 0 0 NA C coding 323 969 77 1045 PB.7916.2 chr14 - 3621 6 novel_not_in_catalog DEGS2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 157 None 13 24 1 TRUE 0 0 NA C coding 323 969 76 1044 PB.7916.3 chr14 - 2862 5 novel_not_in_catalog DEGS2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 158 None 13 22 1 TRUE 0 0 NA C coding 132 396 781 1176 PB.1588.1 chr2 - 2701 1 incomplete-splice_match FAM168B ENST00000409185.5 5285 7 2581 4 no_subtype FALSE canonical NA NA NA None 6 29 0 FALSE 0 0 NA C coding 102 306 272 577 PB.7916.1 chr14 + 3452 1 novel_in_catalog EVL novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA C coding 171 513 2299 2811 PB.5218.1 chr9 + 2676 8 novel_in_catalog IL33 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 667 None 61 14 0 FALSE 0 0 NA B coding 270 810 56 865 PB.8700.1 chr16 + 3066 12 novel_in_catalog CDH1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 1835 None 11 4 0 FALSE 0 0 NA B coding 706 2118 125 2242 PB.5218.3 chr9 + 2584 7 novel_in_catalog IL33 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 575 None 3 14 0 FALSE 0 0 NA B coding 175 525 56 580 PB.5218.2 chr9 + 2654 8 novel_not_in_catalog IL33 novel NA NA NA NA no_subtype FALSE canonical NA NA 647 None 8 22 0 FALSE 0 0 NA B coding 155 465 381 845 PB.9263.1 chr17 + 3213 5 genic_intron novelGene_563 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3037 None 2 12 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.3131.1 chr4 + 2700 1 genic_intron novelGene_1330 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5246.1 chr9 + 4441 23 novel_in_catalog TEK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3438 None 6 9 1 FALSE 0 0 NA A coding 1123 3369 142 3510 PB.2510.4 chr3 + 3580 15 novel_in_catalog PLS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1792 None 12 18 0 FALSE 0 0 NA C coding 629 1887 39 1925 PB.864.1 chr1 + 2591 9 novel_not_in_catalog METTL13 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2133 None 2 3 1 TRUE 0 0 NA A coding 699 2097 309 2405 PB.2065.1 chr3 + 2798 1 incomplete-splice_match RBMS3 ENST00000434693.6 8540 15 5727 16 no_subtype FALSE canonical NA NA NA None 8 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5139.8 chr8 - 3255 16 novel_in_catalog TRAPPC9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 81 None 2 2 0 FALSE 0 0 NA B coding 818 2454 92 2545 PB.1924.10 chr2 + 3832 19 incomplete-splice_match INPP5D ENST00000445964.5 4845 27 1008 5 internal_fragment FALSE canonical NA NA 2640 None 2 3 0 FALSE 0 0 NA B coding 876 2628 13 2640 PB.8363.1 chr16 - 3450 19 novel_not_in_catalog UNKL novel NA NA NA NA no_subtype TRUE canonical NA NA 106 None 2 20 1 TRUE 0 0 NA A coding 733 2199 30 2228 PB.4362.3 chr7 - 1778 10 full-splice_match NT5C3A ENST00000456458.5 1742 10 -40 4 no_subtype FALSE canonical NA NA 269 None 4 6 0 FALSE 0 0 NA C coding 297 891 289 1179 PB.5139.1 chr8 - 4278 23 novel_not_in_catalog TRAPPC9 novel NA NA NA NA no_subtype FALSE canonical NA NA 130 None 6 1 0 TRUE 0 0 NA B coding 1139 3417 141 3557 PB.579.1 chr1 + 1432 2 genic_intron novelGene_1009 novel NA NA NA NA no_subtype FALSE canonical NA NA 1350 None 2 22 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5968.2 chr10 - 1508 5 full-splice_match BLOC1S2 ENST00000614731.4 2634 5 -300 1426 no_subtype FALSE canonical NA NA 378 None 3 6 0 FALSE 0 0 NA C coding 99 297 453 749 PB.5139.5 chr8 - 4268 24 novel_not_in_catalog TRAPPC9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 100 None 12 5 1 TRUE 0 0 NA B coding 990 2970 111 3080 PB.10221.1 chr20 + 1488 1 genic_intron novelGene_13 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9812.1 chr19 + 2896 2 antisense novelGene_CTC-250I14.6_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 677 None 2 17 1 FALSE 0 0 NA A coding 223 669 1182 1850 PB.1225.4 chr2 + 2588 2 incomplete-splice_match GAREM2 ENST00000401533.6 4161 6 1570 3 internal_fragment FALSE canonical NA NA 158 None 2 12 0 FALSE 0 0 NA A coding 11 33 1150 1182 PB.9812.2 chr19 + 1847 1 full-splice_match IER2 ENST00000588173.1 2934 1 1080 7 no_subtype FALSE canonical NA NA NA None 272 12 0 FALSE 0 0 NA A coding 223 669 133 801 PB.1225.1 chr2 + 2373 18 fusion HADHB,GAREM2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1829 None 5 7 2 TRUE 0 0 NA A coding 474 1422 441 1862 PB.7646.1 chr14 + 2122 25 full-splice_match SCFD1 ENST00000458591.6 2359 25 216 21 no_subtype FALSE canonical NA NA 1916 None 5 7 0 FALSE 0 0 NA A coding 642 1926 12 1937 PB.10672.4 chr22 - 3122 7 novel_not_in_catalog GUCD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 159 None 77 17 0 TRUE 0 0 NA B coding 239 717 117 833 PB.1924.14 chr2 + 2732 10 novel_not_in_catalog INPP5D novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1552 None 2 14 2 TRUE 0 0 NA B coding 493 1479 74 1552 PB.10672.1 chr22 - 3285 7 novel_not_in_catalog GUCD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 321 None 36 19 0 TRUE 0 0 NA B coding 295 885 111 995 PB.10672.3 chr22 - 2901 7 novel_not_in_catalog GUCD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 175 None 2 19 1 TRUE 0 0 NA B coding 137 411 133 543 PB.1310.1 chr2 + 3269 4 genic_intron novelGene_439 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3182 None 2 21 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.1084.1 chr1 - 1601 7 full-splice_match PYCR2 ENST00000343818.10 1689 7 85 3 no_subtype FALSE canonical NA NA 131 None 3 6 0 FALSE 0 0 NA A coding 320 960 65 1024 PB.3247.1 chr5 + 2942 2 genic_intron novelGene_530 novel NA NA NA NA no_subtype FALSE canonical NA NA 2866 None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2053.1 chr3 + 778 4 novel_not_in_catalog RPL15 novel NA NA NA NA no_subtype FALSE canonical NA NA 429 None 10 0 0 FALSE 0 0 NA C coding 204 612 121 732 PB.232.1 chr1 + 1912 5 full-splice_match ZBTB8A ENST00000373510.8 7075 5 15 5148 no_subtype FALSE canonical NA NA 1207 None 2 3 0 FALSE 0 0 NA A coding 441 1323 215 1537 PB.10160.8 chr19 - 3431 9 novel_in_catalog NLRP12 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 477 None 5 2 0 FALSE 0 0 NA B coding 1033 3099 189 3287 PB.6935.1 chr12 - 2443 5 novel_not_in_catalog ASB8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 36 None 2 11 1 TRUE 0 0 NA B coding 288 864 70 933 PB.6935.2 chr12 - 1566 5 novel_not_in_catalog ASB8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 46 None 7 2 0 TRUE 0 0 NA B coding 288 864 80 943 PB.2903.1 chr4 + 3263 1 incomplete-splice_match BMP2K ENST00000502613.1 6902 9 3626 14 no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3744.1 chr6 + 1375 5 full-splice_match EDN1 ENST00000379375.5 2033 5 -2 660 no_subtype FALSE canonical NA NA 802 None 4 10 0 FALSE 0 0 NA A coding 212 636 270 905 PB.10285.1 chr20 + 3424 11 novel_not_in_catalog KAT14 novel NA NA NA NA no_subtype FALSE canonical NA NA 2675 None 29 13 0 FALSE 0 0 NA A coding 781 2343 504 2846 PB.4702.2 chr7 - 1469 1 genic_intron novelGene_1174 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9202.1 chr17 - 2772 2 genic PRR15L novel NA NA NA NA no_subtype TRUE canonical NA NA 2688 None 2 13 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.9202.2 chr17 - 1520 2 full-splice_match PRR15L ENST00000300557.2 1519 2 -5 4 no_subtype FALSE canonical NA NA 227 None 16 4 0 FALSE 0 0 NA C coding 103 309 257 565 PB.9202.3 chr17 - 2775 1 genic PRR15L novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 35 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1588.2 chr2 - 5424 7 full-splice_match FAM168B ENST00000389915.3 944 7 8 -4488 no_subtype FALSE canonical NA NA 239 None 6 29 0 FALSE 0 0 NA C coding 195 585 251 835 PB.10172.1 chr19 - 1502 8 full-splice_match HSPBP1 ENST00000433386.6 1572 8 66 4 no_subtype FALSE canonical NA NA 77 None 28 2 0 FALSE 0 0 NA A coding 359 1077 172 1248 PB.5222.1 chr9 + 1747 2 full-splice_match LURAP1L ENST00000319264.3 1753 2 2 4 no_subtype FALSE canonical NA NA 1005 None 4 3 0 FALSE 0 0 NA A coding 228 684 694 1377 PB.11104.2 chrX + 2568 4 full-splice_match NXT2 ENST00000372106.5 2562 4 -13 7 no_subtype FALSE canonical NA NA 391 None 4 10 0 FALSE 0 0 NA C coding 142 426 145 570 PB.5608.1 chr9 + 2131 1 full-splice_match LINC00094 ENST00000599836.1 1689 1 1534 -1976 no_subtype FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3852.9 chr6 - 2647 2 full-splice_match ZBTB22 ENST00000431845.2 2651 2 -2 6 no_subtype FALSE canonical NA NA 85 None 4 6 0 FALSE 0 0 NA A coding 634 1902 155 2056 PB.3439.1 chr5 + 2019 15 full-splice_match SNX2 ENST00000379516.6 2128 15 100 9 no_subtype FALSE canonical NA NA 1517 None 123 3 0 FALSE 0 0 NA A coding 519 1557 9 1565 PB.10820.1 chr22 + 4483 8 full-splice_match NUP50 ENST00000347635.8 5233 8 152 598 no_subtype FALSE canonical NA NA 1518 None 8 38 0 FALSE 0 0 NA A coding 440 1320 399 1718 PB.2978.9 chr4 + 2679 3 genic_intron novelGene_930 novel NA NA NA NA no_subtype FALSE canonical NA NA 1551 None 2 13 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.3554.1 chr5 + 956 8 full-splice_match NDFIP1 ENST00000253814.5 3851 8 319 2576 no_subtype TRUE canonical NA NA 819 None 85 1 0 FALSE 0 0 NA A coding 221 663 152 814 PB.3852.3 chr6 - 3104 9 novel_not_in_catalog TAPBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 57 None 240 19 0 TRUE 0 0 NA C coding 448 1344 21 1364 PB.9306.1 chr17 + 2704 20 full-splice_match CEP95 ENST00000556440.6 3139 20 432 3 no_subtype FALSE canonical NA NA 2367 None 8 5 1 FALSE 0 0 NA A coding 821 2463 79 2541 PB.3852.1 chr6 - 1563 8 novel_not_in_catalog TAPBP novel NA NA NA NA no_subtype FALSE canonical NA NA 58 None 2 1 0 FALSE 0 0 NA C coding 455 1365 22 1386 PB.48.2 chr1 - 1545 1 incomplete-splice_match CLSTN1 ENST00000477264.1 2169 4 625 0 no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3852.7 chr6 - 1433 8 full-splice_match TAPBP ENST00000434618.6 3759 8 324 2002 no_subtype FALSE canonical NA NA 59 None 4 0 0 FALSE 0 0 NA C coding 448 1344 23 1366 PB.3852.6 chr6 + 1874 11 antisense novelGene_TAPBP_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1752 None 2 26 3 FALSE 0 0 NA B non_coding NA NA NA NA PB.3852.5 chr6 - 1846 10 genic TAPBP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 122 None 3 15 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.3852.4 chr6 - 2119 14 genic TAPBP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 252 None 2 21 4 TRUE 0 0 NA C non_coding NA NA NA NA PB.7959.263 chr14 - 1548 5 novel_not_in_catalog IGHM novel NA NA NA NA no_subtype FALSE canonical NA NA 72 None 2 7 0 TRUE 0 0 NA B coding 472 1416 11 1426 PB.8752.1 chr16 + 2830 3 novel_not_in_catalog TERF2IP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1605 None 2 23 0 TRUE 0 0 NA C coding 147 441 1567 2007 PB.8689.1 chr16 - 1930 1 full-splice_match DDX28 ENST00000332395.6 2169 1 212 27 no_subtype FALSE canonical NA NA NA None 10 3 0 FALSE 0 0 NA A coding 540 1620 29 1648 PB.7959.260 chr14 - 1893 10 fusion IGHM,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 9 3 TRUE 0 0 NA B coding 375 1125 647 1771 PB.7959.267 chr14 - 1598 5 novel_not_in_catalog IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 117 None 4 3 0 TRUE 0 0 NA B coding 375 1125 353 1477 PB.7959.266 chr14 - 1921 11 fusion IGHV4-39,IGHM,IGHV3-21 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 57 None 2 8 3 TRUE 0 0 NA A coding 375 1125 676 1800 PB.7959.265 chr14 - 1917 8 fusion IGHV4-34,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 81 None 2 9 1 TRUE 0 0 NA B coding 375 1125 672 1796 PB.7959.264 chr14 - 1952 8 fusion IGHV1-18,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 100 None 2 10 1 TRUE 0 0 NA A coding 375 1125 706 1830 PB.10412.1 chr20 + 3081 3 full-splice_match SNX21 ENST00000344780.4 3106 3 25 0 no_subtype FALSE canonical NA NA 444 None 6 16 0 FALSE 0 0 NA A coding 184 552 565 1116 PB.7959.268 chr14 - 1907 10 fusion IGHM,IGHV4-39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 3 9 4 TRUE 0 0 NA B coding 375 1125 662 1786 PB.1716.1 chr2 + 1482 11 novel_not_in_catalog HNRNPA3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1115 None 34 1 0 FALSE 0 0 NA A coding 311 933 165 1097 PB.10573.10 chr21 + 1499 10 novel_not_in_catalog MX1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1146 None 4 4 1 TRUE 0 0 NA B coding 354 1062 218 1279 PB.10573.11 chr21 + 5610 15 novel_not_in_catalog MX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 4936 None 2 29 0 TRUE 0 0 NA B coding 273 819 4343 5161 PB.10573.12 chr21 + 2718 17 novel_not_in_catalog MX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2040 None 2 6 0 TRUE 0 0 NA B coding 662 1986 280 2265 PB.10573.13 chr21 + 2634 16 novel_not_in_catalog MX1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1956 None 3 8 1 TRUE 0 0 NA B coding 662 1986 196 2181 PB.10573.14 chr21 + 2630 15 novel_not_in_catalog MX1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1952 None 2 10 2 TRUE 0 0 NA B coding 661 1983 195 2177 PB.5361.17 chr9 + 2947 2 novel_in_catalog SYK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 150 None 2 9 0 FALSE 0 0 NA C coding 180 540 192 731 PB.5361.14 chr9 + 4275 16 novel_not_in_catalog SYK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3287 None 5 10 1 TRUE 0 0 NA C coding 635 1905 203 2107 PB.5553.1 chr9 - 1735 12 novel_in_catalog KYAT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 60 None 7 3 0 FALSE 0 0 NA A coding 422 1266 8 1273 PB.1629.1 chr2 + 2818 1 genic_intron novelGene_1217 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 14 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5361.19 chr9 + 6463 1 genic_intron novelGene_834 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 29 0 FALSE 0 0 NA B coding 146 438 4621 5058 PB.11015.1 chrX + 4303 33 novel_not_in_catalog KIF4A novel NA NA NA NA no_subtype TRUE canonical NA NA 3544 None 2 9 0 TRUE 0 0 NA A coding 1232 3696 50 3745 PB.2585.1 chr3 - 2816 1 novel_in_catalog TNIK novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7137.1 chr12 + 4204 17 novel_not_in_catalog ACSS3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2036 None 2 23 0 TRUE 0 0 NA A coding 686 2058 42 2099 PB.2913.2 chr4 - 2547 8 full-splice_match TMEM150C ENST00000449862.6 1990 8 215 -772 no_subtype TRUE canonical NA NA 94 None 15 10 0 FALSE 0 0 NA A coding 249 747 105 851 PB.4718.11 chr7 - 3247 2 novel_not_in_catalog RP5-894A10.2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 133 None 3 9 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.6500.1 chr11 + 4220 6 novel_not_in_catalog CCND1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1783 None 4 10 1 TRUE 0 0 NA B coding 295 885 159 1043 PB.6444.1 chr11 + 2944 4 full-splice_match OVOL1 ENST00000335987.7 3034 4 77 13 no_subtype FALSE canonical NA NA 783 None 30 8 0 FALSE 0 0 NA A coding 267 801 276 1076 PB.6971.2 chr12 + 2539 7 full-splice_match ATF1 ENST00000262053.7 2181 7 -208 -150 no_subtype TRUE canonical NA NA 901 None 2 16 0 FALSE 0 0 NA C coding 271 813 231 1043 PB.1629.2 chr2 + 857 2 genic_intron novelGene_1217 novel NA NA NA NA no_subtype FALSE canonical NA NA 636 None 4 10 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.4401.1 chr7 + 4083 21 full-splice_match AEBP1 ENST00000223357.7 4081 21 -5 3 no_subtype TRUE canonical NA NA 3119 None 8 15 0 FALSE 0 0 NA A coding 1158 3474 311 3784 PB.9904.5 chr19 - 3404 20 full-splice_match GMIP ENST00000587238.5 2987 20 -53 -364 no_subtype FALSE canonical NA NA 104 None 8 2 0 FALSE 0 0 NA C coding 944 2832 86 2917 PB.5671.2 chr10 + 1783 7 novel_not_in_catalog TAF3 novel NA NA NA NA no_subtype TRUE canonical NA NA 613 None 2 3 0 TRUE 0 0 NA B coding 531 1593 191 1783 PB.9904.7 chr19 - 3415 22 novel_not_in_catalog GMIP novel NA NA NA NA no_subtype FALSE canonical NA NA 17 None 36 3 0 TRUE 0 0 NA C coding 944 2832 99 2930 PB.9904.6 chr19 - 3495 23 novel_not_in_catalog GMIP novel NA NA NA NA no_subtype FALSE canonical NA NA 17 None 77 4 0 TRUE 0 0 NA C coding 970 2910 99 3008 PB.9904.1 chr19 - 2882 22 novel_not_in_catalog GMIP novel NA NA NA NA no_subtype TRUE canonical NA NA 90 None 2 3 0 TRUE 0 0 NA C coding 878 2634 72 2705 PB.10059.2 chr19 + 3768 6 novel_not_in_catalog FOSB novel NA NA NA NA no_subtype TRUE canonical NA NA 1145 None 3 10 0 TRUE 0 0 NA C coding 338 1014 588 1601 PB.10059.1 chr19 + 4068 1 full-splice_match FOSB ENST00000586113.1 2182 1 -1890 4 no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA C coding 128 384 2655 3038 PB.575.3 chr1 + 5740 22 novel_in_catalog MOV10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3773 None 2 16 0 FALSE 0 0 NA C coding 947 2841 1022 3862 PB.575.2 chr1 + 3363 21 novel_not_in_catalog MOV10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3045 None 2 5 0 TRUE 0 0 NA C coding 1003 3009 126 3134 PB.575.1 chr1 + 3326 21 full-splice_match MOV10 ENST00000369645.5 3552 21 218 8 no_subtype FALSE canonical NA NA 3010 None 33 0 0 FALSE 0 0 NA C coding 1003 3009 91 3099 PB.7926.8 chr14 + 1315 1 incomplete-splice_match PPP2R5C ENST00000350249.7 3845 13 2317 214 no_subtype FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2930.1 chr4 + 5978 1 genic_intron novelGene_771 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 34 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2206.1 chr3 + 1610 9 full-splice_match GNAI2 ENST00000313601.10 2464 9 385 469 no_subtype FALSE canonical NA NA 1091 None 22 6 0 FALSE 0 0 NA C coding 338 1014 51 1064 PB.782.1 chr1 + 2375 4 full-splice_match PEA15 ENST00000360472.8 2471 4 88 8 no_subtype FALSE canonical NA NA 428 None 30 8 0 FALSE 0 0 NA A coding 130 390 101 490 PB.7429.2 chr13 + 3952 31 novel_in_catalog PDS5B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3645 None 2 0 0 FALSE 0 0 NA B coding 1310 3930 22 3951 PB.5527.1 chr9 - 2890 16 novel_not_in_catalog ENG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 278 None 151 5 0 FALSE 0 0 NA B coding 672 2016 212 2227 PB.8589.1 chr16 + 1588 9 novel_not_in_catalog ORC6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1410 None 3 7 2 TRUE 0 0 NA A coding 252 756 107 862 PB.1969.1 chr3 + 1541 9 incomplete-splice_match TRNT1 ENST00000434583.5 1871 10 -10 340 3prime_fragment FALSE canonical NA NA 1401 None 2 2 0 FALSE 0 0 NA A coding 405 1215 151 1365 PB.7229.6 chr12 - 2173 3 novel_not_in_catalog SELPLG novel NA NA NA NA no_subtype FALSE canonical NA NA 142 None 24 4 0 TRUE 0 0 NA B coding 412 1236 151 1386 PB.7229.4 chr12 - 3030 4 novel_not_in_catalog SELPLG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 150 None 3 9 1 TRUE 0 0 NA B coding 412 1236 159 1394 PB.7229.3 chr12 - 2989 4 novel_not_in_catalog SELPLG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 4 9 0 TRUE 0 0 NA B coding 412 1236 131 1366 PB.7229.2 chr12 - 2998 3 novel_not_in_catalog SELPLG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 2 12 1 TRUE 0 0 NA B coding 412 1236 128 1363 PB.7229.1 chr12 - 3016 4 novel_not_in_catalog SELPLG novel NA NA NA NA no_subtype FALSE canonical NA NA 152 None 2 14 1 TRUE 0 0 NA B coding 412 1236 161 1396 PB.1871.1 chr2 + 2471 14 novel_not_in_catalog ANKZF1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2151 None 3 6 1 FALSE 0 0 NA B coding 726 2178 95 2272 PB.194.1 chr1 - 1567 9 full-splice_match RPA2 ENST00000373912.7 1752 9 167 18 no_subtype FALSE canonical NA NA 143 None 42 2 0 FALSE 0 0 NA A coding 270 810 134 943 PB.2206.2 chr3 + 2823 2 genic XXcos-LUCA16.1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1212 None 2 20 1 FALSE 0 0 NA C coding 131 393 2304 2696 PB.6468.3 chr11 - 1789 4 full-splice_match RBM4B ENST00000310046.8 1840 4 44 7 no_subtype FALSE canonical NA NA 114 None 7 7 1 FALSE 0 0 NA C coding 359 1077 127 1203 PB.6468.1 chr11 - 2847 10 novel_not_in_catalog RBM4B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 107 None 2 18 1 TRUE 0 0 NA C coding 151 453 120 572 PB.4096.1 chr6 + 1490 12 full-splice_match NT5DC1 ENST00000319550.8 6923 12 -1 5434 no_subtype FALSE canonical NA NA 1335 None 41 3 0 FALSE 0 0 NA A coding 455 1365 84 1448 PB.5959.2 chr10 + 2536 1 novel_in_catalog R3HCC1L novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA C coding 107 321 308 628 PB.2206.5 chr3 + 1450 7 full-splice_match GNAI2 ENST00000490122.5 2445 7 988 7 no_subtype FALSE canonical NA NA 931 None 10 3 0 FALSE 0 0 NA C coding 274 822 83 904 PB.1871.3 chr2 + 2746 13 novel_in_catalog ANKZF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2413 None 2 4 0 FALSE 0 0 NA B coding 661 1983 552 2534 PB.2206.4 chr3 + 6202 1 novel_in_catalog GNAI2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 26 0 FALSE 0 0 NA C coding 141 423 3978 4400 PB.7235.1 chr12 - 3485 1 antisense novelGene_ACACB_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.561.2 chr1 - 2831 9 novel_not_in_catalog DRAM2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 211 None 3 14 2 TRUE 0 0 NA B coding 121 363 283 645 PB.561.3 chr1 - 1372 10 novel_not_in_catalog DRAM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 41 None 3 3 1 FALSE 0 0 NA B coding 266 798 316 1113 PB.561.5 chr1 - 1423 11 novel_not_in_catalog DRAM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 41 None 2 4 1 FALSE 0 0 NA B coding 266 798 374 1171 PB.561.6 chr1 - 1375 11 novel_not_in_catalog DRAM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 41 None 2 3 1 FALSE 0 0 NA B coding 266 798 329 1126 PB.2423.1 chr3 - 2402 14 full-splice_match KPNA1 ENST00000344337.10 6830 14 7 4421 no_subtype FALSE canonical NA NA 165 None 76 4 0 FALSE 0 0 NA C coding 538 1614 171 1784 PB.7066.2 chr12 + 1938 7 novel_not_in_catalog TSFM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1829 None 4 4 0 TRUE 0 0 NA C coding 325 975 13 987 PB.1445.1 chr2 + 2619 9 full-splice_match MAT2A ENST00000306434.7 2819 9 200 0 no_subtype FALSE canonical NA NA 1008 None 116 6 0 FALSE 0 0 NA C coding 332 996 113 1108 PB.2206.6 chr3 + 3417 7 novel_in_catalog GNAI2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2030 None 2 10 0 FALSE 0 0 NA C coding 303 909 1310 2218 PB.1975.1 chr3 - 2139 10 novel_not_in_catalog SUMF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 290 None 24 4 0 TRUE 0 0 NA B coding 374 1122 21 1142 PB.8809.1 chr16 - 2780 5 incomplete-splice_match ANKRD11 ENST00000378330.6 9132 14 6340 12 5prime_fragment FALSE canonical NA NA 1419 None 13 4 0 FALSE 0 0 NA B coding 498 1494 445 1938 PB.9121.2 chr17 - 3160 15 full-splice_match JUP ENST00000310706.9 3200 15 24 16 no_subtype FALSE canonical NA NA 87 None 121 2 0 FALSE 0 0 NA C coding 745 2235 96 2330 PB.6448.1 chr11 + 1257 10 full-splice_match CTSW ENST00000307886.7 1300 10 33 10 no_subtype TRUE canonical NA NA 1033 None 10 2 0 FALSE 0 0 NA A coding 376 1128 14 1141 PB.9121.6 chr17 - 3208 15 novel_not_in_catalog JUP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 110 None 4 15 1 TRUE 0 0 NA C coding 745 2235 119 2353 PB.6325.3 chr11 + 2602 1 incomplete-splice_match PTPRJ ENST00000613246.4 7851 25 5236 14 no_subtype FALSE canonical NA NA NA None 19 13 0 FALSE 0 0 NA B coding 105 315 1534 1848 PB.6016.2 chr10 - 2432 21 full-splice_match XPNPEP1 ENST00000502935.5 2539 21 98 9 no_subtype FALSE canonical NA NA 54 None 5 1 0 FALSE 0 0 NA C coding 666 1998 23 2020 PB.9121.5 chr17 - 3516 14 full-splice_match JUP ENST00000393931.7 3497 14 -31 12 no_subtype FALSE canonical NA NA 142 None 12 23 0 FALSE 0 0 NA C coding 745 2235 151 2385 PB.6919.6 chr12 - 5611 1 novel_in_catalog SLC38A1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 11 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10044.1 chr19 - 3057 6 novel_not_in_catalog ZNF180 novel NA NA NA NA no_subtype FALSE canonical NA NA 265 None 3 11 0 TRUE 0 0 NA A coding 665 1995 309 2303 PB.6919.4 chr12 - 5606 17 full-splice_match SLC38A1 ENST00000398637.9 8066 17 20 2440 no_subtype FALSE canonical NA NA 467 None 2 19 0 FALSE 0 0 NA C coding 487 1461 676 2136 PB.6919.5 chr12 - 3586 1 novel_in_catalog SLC38A1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA C coding 114 342 1915 2256 PB.1239.2 chr2 + 3695 17 novel_in_catalog NRBP1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 3149 None 3 8 0 FALSE 0 0 NA C coding 326 978 2274 3251 PB.6919.3 chr12 - 4269 8 incomplete-splice_match SLC38A1 ENST00000549049.5 3196 16 1227 -2300 5prime_fragment FALSE canonical NA NA 41 None 3 13 0 FALSE 0 0 NA C coding 259 777 21 797 PB.1239.1 chr2 + 2124 18 full-splice_match NRBP1 ENST00000379852.7 2163 18 37 2 no_subtype FALSE canonical NA NA 1578 None 29 1 0 FALSE 0 0 NA C coding 535 1605 76 1680 PB.4059.1 chr6 - 3403 22 novel_not_in_catalog SEC63 novel NA NA NA NA no_subtype FALSE canonical NA NA 309 None 26 8 0 TRUE 0 0 NA C coding 760 2280 186 2465 PB.109.2 chr1 - 1628 11 novel_not_in_catalog DDOST novel NA NA NA NA no_subtype FALSE canonical NA NA 207 None 184 8 1 FALSE 0 0 NA B coding 438 1314 54 1367 PB.4059.3 chr6 - 1760 16 incomplete-splice_match SEC63 ENST00000369002.8 6411 21 -12 4663 internal_fragment FALSE canonical NA NA 316 None 14 1 0 FALSE 0 0 NA C coding 522 1566 193 1758 PB.2146.1 chr3 - 1576 3 novel_not_in_catalog CCR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 126 None 3 3 0 TRUE 0 0 NA A coding 355 1065 138 1202 PB.4528.1 chr7 + 1634 1 novel_in_catalog TRRAP novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8561.1 chr16 - 2555 4 novel_not_in_catalog ZNF689 novel NA NA NA NA no_subtype FALSE canonical NA NA 376 None 7 13 0 TRUE 0 0 NA A coding 500 1500 172 1671 PB.1219.1 chr2 + 2834 2 novel_not_in_catalog EFR3B novel NA NA NA NA no_subtype FALSE canonical NA NA 218 None 2 22 1 TRUE 0 0 NA A coding 77 231 66 296 PB.6939.2 chr12 - 1924 2 full-splice_match CCNT1 ENST00000551989.1 726 2 -260 -938 no_subtype FALSE canonical NA NA 479 None 2 3 0 FALSE 0 0 NA C coding 441 1323 558 1880 PB.6939.3 chr12 - 1536 2 novel_in_catalog CCNT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 231 None 2 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6460.2 chr11 - 1976 9 novel_in_catalog BRMS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 130 None 2 6 0 FALSE 0 0 NA C coding 233 699 138 836 PB.6460.1 chr11 - 1352 10 full-splice_match BRMS1 ENST00000359957.7 1445 10 87 6 no_subtype FALSE canonical NA NA 67 None 24 8 1 FALSE 0 0 NA C coding 246 738 75 812 PB.6727.13 chr11 + 1650 10 full-splice_match ST3GAL4 ENST00000526727.5 1967 10 312 5 no_subtype FALSE canonical NA NA 977 None 8 0 0 FALSE 0 0 NA C coding 333 999 63 1061 PB.6231.2 chr11 - 1505 13 novel_not_in_catalog SAAL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 166 None 15 1 0 TRUE 0 0 NA A coding 473 1419 32 1450 PB.9302.3 chr17 - 3530 17 novel_not_in_catalog PECAM1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 138 None 93 5 1 TRUE 0 0 NA B coding 728 2184 264 2447 PB.9302.2 chr17 - 2863 17 novel_not_in_catalog PECAM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 197 None 16 2 0 FALSE 0 0 NA B coding 728 2184 326 2509 PB.9302.4 chr17 - 2758 17 novel_in_catalog PECAM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 92 None 11 8 1 FALSE 0 0 NA B coding 728 2184 221 2404 PB.9429.1 chr17 - 2563 12 novel_not_in_catalog TEPSIN novel NA NA NA NA no_subtype FALSE canonical NA NA 75 None 3 10 1 FALSE 0 0 NA A coding 214 642 28 669 PB.9302.6 chr17 - 3639 17 novel_not_in_catalog PECAM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 243 None 3 4 0 FALSE 0 0 NA B coding 728 2184 372 2555 PB.8420.1 chr16 - 3706 16 full-splice_match GLYR1 ENST00000321919.13 3772 16 57 9 no_subtype FALSE canonical NA NA 58 None 61 11 0 FALSE 0 0 NA C coding 553 1659 21 1679 PB.8420.3 chr16 - 3090 16 novel_in_catalog GLYR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 57 None 4 10 0 FALSE 0 0 NA C coding 472 1416 20 1435 PB.7939.1 chr14 + 2776 6 incomplete-splice_match TNFAIP2 ENST00000333007.5 4175 11 1397 2 internal_fragment TRUE canonical NA NA 557 None 2 8 0 FALSE 0 0 NA B coding 221 663 34 696 PB.8420.5 chr16 - 2583 11 novel_in_catalog GLYR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 55 None 2 7 0 FALSE 0 0 NA C coding 368 1104 18 1121 PB.10378.7 chr20 + 2610 1 incomplete-splice_match PPP1R16B ENST00000373331.2 6106 10 3488 9 no_subtype FALSE canonical NA NA NA None 5 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7959.227 chr14 - 1500 10 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 31 7 4 TRUE 0 0 NA B coding 196 588 781 1368 PB.10378.5 chr20 + 6184 11 novel_not_in_catalog PPP1R16B novel NA NA NA NA no_subtype FALSE canonical NA NA 1324 None 2 11 0 FALSE 0 0 NA C coding 381 1143 689 1831 PB.10378.4 chr20 + 2629 3 novel_in_catalog PPP1R16B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 424 None 2 12 0 FALSE 0 0 NA C coding 185 555 175 729 PB.10378.3 chr20 + 5904 10 novel_in_catalog PPP1R16B novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1040 None 2 13 0 FALSE 0 0 NA C coding 399 1197 351 1547 PB.10378.2 chr20 + 3302 1 novel_in_catalog PPP1R16B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 12 8 0 FALSE 0 0 NA C coding 153 459 452 910 PB.10378.1 chr20 + 6255 11 full-splice_match PPP1R16B ENST00000299824.5 6251 11 -8 4 no_subtype FALSE canonical NA NA 1391 None 15 10 0 FALSE 0 0 NA C coding 567 1701 198 1898 PB.6416.1 chr11 - 1588 1 full-splice_match MIR194-2HG ENST00000384915.3 110 1 89 -1567 no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A coding 154 462 14 475 PB.5823.1 chr10 + 2653 4 novel_not_in_catalog EIF4EBP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 974 None 26 10 1 TRUE 0 0 NA B coding 120 360 227 586 PB.6366.1 chr11 + 5807 20 full-splice_match DAGLA ENST00000257215.9 5757 20 -55 5 no_subtype TRUE canonical NA NA 2342 None 5 14 0 FALSE 0 0 NA C coding 1042 3126 172 3297 PB.6337.1 chr11 - 1866 9 full-splice_match LPXN ENST00000395074.6 1833 9 -40 7 no_subtype FALSE canonical NA NA 142 None 43 3 0 FALSE 0 0 NA A coding 386 1158 130 1287 PB.2816.3 chr4 - 3942 7 full-splice_match RBM47 ENST00000295971.11 4056 7 0 114 no_subtype FALSE canonical NA NA 469 None 5 10 0 FALSE 0 0 NA C coding 593 1779 709 2487 PB.745.1 chr1 - 1603 6 full-splice_match GLMP ENST00000362007.5 1604 6 -6 7 no_subtype FALSE canonical NA NA 153 None 72 3 0 FALSE 0 0 NA C coding 406 1218 34 1251 PB.546.1 chr1 + 1415 8 full-splice_match GSTM4 ENST00000369836.8 1412 8 -9 6 no_subtype FALSE canonical NA NA 885 None 2 2 0 FALSE 0 0 NA A coding 218 654 319 972 PB.433.5 chr1 - 2721 7 novel_in_catalog ZRANB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 90 None 2 14 0 FALSE 0 0 NA C coding 228 684 35 718 PB.10586.1 chr21 - 5784 1 novel_in_catalog U2AF1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 40 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.745.2 chr1 - 1705 5 novel_in_catalog GLMP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 145 None 8 5 0 FALSE 0 0 NA C coding 352 1056 26 1081 PB.9795.1 chr19 - 4330 25 novel_in_catalog TNPO2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 63 None 3 14 1 FALSE 0 0 NA A coding 887 2661 77 2737 PB.8093.1 chr15 - 3325 1 antisense novelGene_RP11-23N2.4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 37 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4520.1 chr7 - 2595 12 novel_not_in_catalog PDK4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 387 None 10 4 0 TRUE 0 0 NA A coding 411 1233 258 1490 PB.3982.1 chr6 + 6822 15 full-splice_match PHF3 ENST00000393387.5 6947 15 65 60 no_subtype FALSE canonical NA NA 3958 None 2 7 0 FALSE 0 0 NA C coding 1992 5976 103 6078 PB.1625.1 chr2 + 1839 1 genic_intron novelGene_1215 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A coding 114 342 1405 1746 PB.4632.1 chr7 - 1351 11 novel_not_in_catalog FAM3C novel NA NA NA NA no_subtype FALSE canonical NA NA 177 None 9 1 0 TRUE 0 0 NA A coding 227 681 219 899 PB.8920.1 chr17 - 2728 3 novel_not_in_catalog KRBA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 810 None 2 9 0 FALSE 0 0 NA A coding 458 1374 873 2246 PB.8436.2 chr16 + 3320 1 novel_in_catalog CLEC16A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5044.1 chr8 - 2689 5 novel_not_in_catalog ANKRD46 novel NA NA NA NA no_subtype FALSE canonical NA NA 94 None 9 10 1 FALSE 0 0 NA B coding 228 684 225 908 PB.8247.4 chr15 + 1619 6 novel_not_in_catalog ZFAND6 novel NA NA NA NA no_subtype FALSE canonical NA NA 727 None 16 3 1 FALSE 0 0 NA C coding 208 624 250 873 PB.8247.5 chr15 + 1782 7 novel_not_in_catalog ZFAND6 novel NA NA NA NA no_subtype FALSE canonical NA NA 884 None 9 2 0 FALSE 0 0 NA C coding 208 624 407 1030 PB.8247.2 chr15 + 1673 7 full-splice_match ZFAND6 ENST00000261749.10 1814 7 119 22 no_subtype FALSE canonical NA NA 781 None 10 1 0 FALSE 0 0 NA C coding 208 624 304 927 PB.8247.3 chr15 + 1639 9 novel_not_in_catalog ZFAND6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 742 None 2 7 2 TRUE 0 0 NA C coding 208 624 265 888 PB.9421.1 chr17 + 3466 20 novel_in_catalog GAA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2858 None 55 8 1 FALSE 0 0 NA A coding 952 2856 60 2915 PB.8247.1 chr15 + 1507 6 full-splice_match ZFAND6 ENST00000558494.5 1472 6 -24 -11 no_subtype FALSE canonical NA NA 615 None 56 3 0 FALSE 0 0 NA C coding 208 624 138 761 PB.395.2 chr1 - 3147 6 full-splice_match PLPP3 ENST00000371250.3 3292 6 120 25 no_subtype FALSE canonical NA NA 571 None 3 7 0 FALSE 0 0 NA C coding 311 933 433 1365 PB.395.1 chr1 - 1600 7 novel_not_in_catalog PLPP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 686 None 29 0 0 TRUE 0 0 NA C coding 311 933 548 1480 PB.950.2 chr1 + 3977 10 full-splice_match C1orf106 ENST00000413687.2 2197 10 225 -2005 no_subtype FALSE canonical NA NA 1780 None 28 13 0 FALSE 0 0 NA C coding 578 1734 137 1870 PB.5145.1 chr8 + 1925 7 novel_not_in_catalog PTP4A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1507 None 2 13 0 TRUE 0 0 NA B coding 173 519 961 1479 PB.11163.1 chrX - 3306 9 novel_in_catalog FAM122B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1016 None 3 17 1 FALSE 0 0 NA A coding 223 669 919 1587 PB.1544.2 chr2 - 6323 48 full-splice_match ANAPC1 ENST00000341068.7 8262 48 509 1430 no_subtype TRUE canonical NA NA 240 None 14 2 0 FALSE 0 0 NA A coding 1934 5802 295 6096 PB.8632.2 chr16 + 2397 16 novel_not_in_catalog RSPRY1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2249 None 2 3 0 TRUE 0 0 NA B coding 537 1611 733 2343 PB.8632.3 chr16 + 2053 16 novel_not_in_catalog RSPRY1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1906 None 2 1 0 TRUE 0 0 NA B coding 537 1611 390 2000 PB.10343.4 chr20 - 2965 18 novel_in_catalog TRPC4AP novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 193 None 4 8 0 FALSE 0 0 NA C coding 735 2205 26 2230 PB.4516.2 chr7 - 5836 5 novel_not_in_catalog BET1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 709 None 2 42 3 TRUE 0 0 NA C non_coding NA NA NA NA PB.4516.1 chr7 - 1334 4 full-splice_match BET1 ENST00000222547.7 1504 4 65 105 no_subtype FALSE canonical NA NA 113 None 17 5 0 FALSE 0 0 NA C coding 118 354 95 448 PB.2047.1 chr3 - 2804 2 genic_intron novelGene_191 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2223 None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7342.2 chr12 - 2848 14 novel_not_in_catalog ZCCHC8 novel NA NA NA NA no_subtype FALSE canonical NA NA 329 None 26 0 0 TRUE 0 0 NA B coding 707 2121 131 2251 PB.10834.1 chr22 - 2754 10 novel_not_in_catalog BRD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 29 None 2 7 0 TRUE 0 0 NA A coding 583 1749 63 1811 PB.7662.1 chr14 - 1529 13 full-splice_match PPP2R3C ENST00000261475.9 1839 13 294 16 no_subtype FALSE canonical NA NA 118 None 8 2 1 FALSE 0 0 NA A coding 453 1359 61 1419 PB.8818.1 chr16 - 1568 11 full-splice_match FANCA ENST00000389302.7 1641 11 56 17 no_subtype FALSE canonical NA NA 65 None 2 7 0 FALSE 0 0 NA A coding 182 546 332 877 PB.4898.4 chr8 + 5887 2 genic_intron novelGene_419 novel NA NA NA NA no_subtype FALSE canonical NA NA 4256 None 3 30 0 FALSE 0 0 NA A coding 225 675 451 1125 PB.4130.1 chr6 - 2330 5 full-splice_match CTGF ENST00000367976.3 2339 5 1 8 no_subtype FALSE canonical NA NA 266 None 3 4 0 FALSE 0 0 NA A coding 349 1047 201 1247 PB.878.3 chr1 + 2665 1 incomplete-splice_match RABGAP1L ENST00000392064.6 6282 8 3521 97 no_subtype FALSE canonical NA NA NA None 39 21 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.878.2 chr1 + 3108 1 novel_in_catalog RABGAP1L novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.878.1 chr1 + 6216 8 novel_not_in_catalog RABGAP1L novel NA NA NA NA no_subtype FALSE canonical NA NA 759 None 28 38 0 TRUE 0 0 NA C coding 245 735 175 909 PB.6583.3 chr11 - 1449 2 full-splice_match CTSC ENST00000534131.1 583 2 -32 -834 no_subtype FALSE canonical NA NA 268 None 2 19 0 FALSE 0 0 NA C coding 127 381 97 477 PB.7959.194 chr14 - 1598 11 fusion CH17-212P11.5,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 103 None 2 11 5 TRUE 0 0 NA B coding 196 588 877 1464 PB.6583.1 chr11 - 1856 7 full-splice_match CTSC ENST00000227266.9 1921 7 51 14 no_subtype FALSE canonical NA NA 236 None 144 1 0 FALSE 0 0 NA C coding 463 1389 65 1453 PB.5165.3 chr8 + 2917 8 novel_in_catalog GPAA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2580 None 2 21 0 FALSE 0 0 NA C coding 284 852 1008 1859 PB.9383.1 chr17 - 2055 16 full-splice_match SRP68 ENST00000307877.6 2649 16 128 466 no_subtype FALSE canonical NA NA 218 None 82 1 0 FALSE 0 0 NA C coding 627 1881 35 1915 PB.10228.9 chr20 - 6896 6 novel_not_in_catalog SIRPB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 108 None 6 39 1 TRUE 0 0 NA B coding 107 321 804 1124 PB.7682.1 chr14 - 1669 4 novel_not_in_catalog DNAAF2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 678 None 2 8 1 TRUE 0 0 NA B coding 328 984 343 1326 PB.682.2 chr1 - 3023 11 full-splice_match RORC ENST00000318247.6 2180 11 39 -882 no_subtype FALSE canonical NA NA 109 None 17 4 0 FALSE 0 0 NA C coding 518 1554 70 1623 PB.8928.1 chr17 + 3180 15 novel_not_in_catalog GLP2R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2519 None 4 9 0 TRUE 0 0 NA A coding 553 1659 137 1795 PB.9679.3 chr19 - 2979 16 novel_not_in_catalog EEF2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 86 None 3 4 1 TRUE 0 0 NA C coding 858 2574 84 2657 PB.6402.2 chr11 + 1620 14 novel_not_in_catalog STIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1551 None 2 1 1 TRUE 0 0 NA C coding 514 1542 54 1595 PB.6402.1 chr11 + 2080 14 full-splice_match STIP1 ENST00000305218.8 2196 14 111 5 no_subtype FALSE canonical NA NA 1595 None 19 3 0 FALSE 0 0 NA C coding 543 1629 37 1665 PB.406.1 chr1 + 1490 6 incomplete-splice_match USP1 ENST00000339950.4 3996 9 164 2342 3prime_fragment FALSE canonical NA NA 1208 None 2 4 1 FALSE 0 0 NA C coding 279 837 652 1488 PB.2295.1 chr3 + 844 3 full-splice_match ARL6IP5 ENST00000273258.3 2101 3 98 1159 no_subtype FALSE canonical NA NA 400 None 111 1 0 FALSE 0 0 NA C coding 188 564 7 570 PB.7959.34 chr14 - 1476 7 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 86 None 2 10 3 TRUE 0 0 NA B coding 462 1386 41 1426 PB.406.2 chr1 + 3555 9 full-splice_match USP1 ENST00000339950.4 3996 9 378 63 no_subtype FALSE canonical NA NA 2059 None 10 10 1 FALSE 0 0 NA C coding 785 2355 438 2792 PB.749.5 chr1 - 2703 4 novel_not_in_catalog ISG20L2 novel NA NA NA NA no_subtype FALSE canonical NA NA 75 None 4 12 0 FALSE 0 0 NA B coding 353 1059 193 1251 PB.10730.12 chr22 - 7072 41 full-splice_match MYH9 ENST00000216181.9 7501 41 61 368 no_subtype FALSE canonical NA NA 151 None 316 7 0 FALSE 0 0 NA C coding 1960 5880 171 6050 PB.2196.2 chr3 + 2545 1 incomplete-splice_match DAG1 ENST00000308775.6 5522 3 2972 6 no_subtype FALSE canonical NA NA NA None 3 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2949.3 chr4 + 2608 1 genic_intron novelGene_801 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 46 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.749.9 chr1 - 2687 4 novel_not_in_catalog ISG20L2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 39 None 2 14 1 TRUE 0 0 NA B coding 353 1059 180 1238 PB.454.1 chr1 - 1332 7 full-splice_match CTBS ENST00000370630.5 6600 7 19 5249 no_subtype FALSE canonical NA NA 207 None 31 4 0 FALSE 0 0 NA C coding 385 1155 31 1185 PB.5979.1 chr10 + 3054 12 novel_not_in_catalog SFXN3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1304 None 5 16 0 TRUE 0 0 NA B coding 321 963 436 1398 PB.6154.1 chr11 + 3034 19 full-splice_match RRM1 ENST00000300738.9 3076 19 34 8 no_subtype FALSE canonical NA NA 2360 None 127 4 0 FALSE 0 0 NA A coding 792 2376 171 2546 PB.8453.1 chr16 + 4242 31 full-splice_match NOMO1 ENST00000287667.11 4355 31 103 10 no_subtype TRUE canonical NA NA 3605 None 14 6 0 FALSE 0 0 NA A coding 1222 3666 69 3734 PB.3562.2 chr5 + 2561 16 incomplete-splice_match RP11-449H3.3 ENST00000506502.2 3311 20 31 719 3prime_fragment TRUE canonical NA NA 2546 None 2 0 0 FALSE 0 0 NA A coding 792 2376 186 2561 PB.10614.8 chr22 + 2515 6 novel_in_catalog IL17RA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 326 None 3 7 0 FALSE 0 0 NA C coding 561 1683 155 1837 PB.5048.4 chr8 - 2768 6 full-splice_match YWHAZ ENST00000395953.6 994 6 83 -1857 no_subtype FALSE canonical NA NA 56 None 42 9 0 FALSE 0 0 NA C coding 245 735 68 802 PB.3758.1 chr6 - 3428 1 incomplete-splice_match ATXN1 ENST00000436367.5 10587 8 7157 3 no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1507.2 chr2 - 3574 21 novel_not_in_catalog REV1 novel NA NA NA NA no_subtype FALSE canonical NA NA 172 None 2 7 0 FALSE 0 0 NA B coding 542 1626 1949 3574 PB.5979.3 chr10 + 2753 10 novel_not_in_catalog SFXN3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1003 None 4 7 0 TRUE 0 0 NA B coding 321 963 135 1097 PB.6227.1 chr11 - 4219 1 novel_in_catalog USH1C novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 21 0 FALSE 0 0 NA B coding 123 369 1050 1418 PB.9366.6 chr17 - 2785 2 full-splice_match GRB2 ENST00000577711.1 555 2 20 -2250 no_subtype FALSE canonical NA NA 173 None 2 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10614.2 chr22 + 5434 14 novel_not_in_catalog IL17RA novel NA NA NA NA no_subtype FALSE canonical NA NA 4560 None 22 33 1 TRUE 0 0 NA C coding 677 2031 498 2528 PB.10614.3 chr22 + 3142 13 full-splice_match IL17RA ENST00000319363.10 8607 13 102 5363 no_subtype FALSE canonical NA NA 1118 None 12 8 0 FALSE 0 0 NA C coding 866 2598 32 2629 PB.11160.1 chrX - 4014 10 novel_not_in_catalog GPC4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 680 None 2 16 1 TRUE 0 0 NA C coding 553 1659 521 2179 PB.9366.2 chr17 - 1280 6 full-splice_match GRB2 ENST00000316804.9 3248 6 26 1942 no_subtype FALSE canonical NA NA 139 None 237 2 0 FALSE 0 0 NA C coding 217 651 277 927 PB.9366.1 chr17 - 2928 1 novel_in_catalog GRB2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 16 0 FALSE 0 0 NA C coding 132 396 2066 2461 PB.11160.2 chrX - 2646 9 full-splice_match GPC4 ENST00000370828.3 4960 9 5 2309 no_subtype FALSE canonical NA NA 680 None 2 5 0 FALSE 0 0 NA C coding 556 1668 521 2188 PB.10318.1 chr20 - 5626 4 novel_not_in_catalog PLAGL2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 110 None 3 20 1 TRUE 0 0 NA B coding 496 1488 225 1712 PB.10035.1 chr19 - 2084 17 full-splice_match XRCC1 ENST00000262887.9 2802 17 443 275 no_subtype FALSE canonical NA NA 156 None 6 2 0 FALSE 0 0 NA A coding 633 1899 106 2004 PB.9403.5 chr17 - 2797 20 novel_not_in_catalog TMC6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 80 None 3 5 1 TRUE 0 0 NA B coding 805 2415 158 2572 PB.10318.2 chr20 - 5615 4 novel_not_in_catalog PLAGL2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 103 None 16 19 1 TRUE 0 0 NA B coding 496 1488 218 1705 PB.7803.1 chr14 - 2589 1 full-splice_match PNMA1 ENST00000316836.4 2590 1 -9 10 no_subtype FALSE canonical NA NA NA None 71 14 0 FALSE 0 0 NA A coding 351 1053 749 1801 PB.9403.2 chr17 - 2848 20 novel_not_in_catalog TMC6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 133 None 25 6 2 TRUE 0 0 NA B coding 805 2415 211 2625 PB.6569.3 chr11 + 5847 16 full-splice_match PCF11 ENST00000298281.8 7677 16 167 1663 no_subtype FALSE canonical NA NA 4737 None 3 11 0 FALSE 0 0 NA C coding 1555 4665 286 4950 PB.8973.1 chr17 + 3027 9 novel_in_catalog EPN2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1810 None 2 10 0 FALSE 0 0 NA C coding 546 1638 469 2106 PB.8973.2 chr17 + 3092 10 full-splice_match EPN2 ENST00000347697.6 4664 10 29 1543 no_subtype FALSE canonical NA NA 1875 None 2 16 0 FALSE 0 0 NA C coding 575 1725 447 2171 PB.11100.5 chrX - 1764 3 full-splice_match TSC22D3 ENST00000372390.8 1812 3 37 11 no_subtype FALSE canonical NA NA 194 None 3 3 0 FALSE 0 0 NA C coding 77 231 244 474 PB.9403.8 chr17 - 2918 19 novel_not_in_catalog TMC6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 51 None 2 11 1 FALSE 0 0 NA B coding 674 2022 122 2143 PB.6434.1 chr11 + 1614 1 full-splice_match NEAT1_3,NEAT1_2,NEAT1 ENST00000613347.1 159 1 -406 -1049 no_subtype FALSE canonical NA NA NA None 14 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6434.3 chr11 + 2125 2 full-splice_match NEAT1 ENST00000499732.2 1811 2 26 -340 no_subtype FALSE canonical NA NA 584 None 3 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7454.1 chr13 - 1559 11 novel_not_in_catalog MTRF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 3 2 0 TRUE 0 0 NA A coding 445 1335 112 1446 PB.1170.1 chr2 + 1460 6 full-splice_match ACP1 ENST00000272065.9 1549 6 80 9 no_subtype FALSE canonical NA NA 412 None 36 14 1 FALSE 0 0 NA C coding 158 474 14 487 PB.1170.2 chr2 + 1463 6 full-splice_match ACP1 ENST00000272067.10 1552 6 84 5 no_subtype FALSE canonical NA NA 411 None 7 12 0 FALSE 0 0 NA C coding 158 474 13 486 PB.2134.2 chr3 - 2700 8 full-splice_match ZDHHC3 ENST00000296127.7 3101 8 67 334 no_subtype FALSE canonical NA NA 183 None 11 8 0 FALSE 0 0 NA C coding 326 978 211 1188 PB.574.1 chr1 + 2975 4 novel_not_in_catalog CAPZA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2538 None 7 16 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.7518.1 chr13 - 3063 21 novel_not_in_catalog DIS3 novel NA NA NA NA no_subtype FALSE canonical NA NA 291 None 27 1 1 FALSE 0 0 NA B coding 621 1863 1079 2941 PB.10219.3 chr20 + 1598 1 novel_in_catalog FAM110A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 11 4 0 FALSE 0 0 NA C coding 295 885 130 1014 PB.10219.2 chr20 + 1713 2 full-splice_match FAM110A ENST00000381941.7 1809 2 92 4 no_subtype FALSE canonical NA NA 145 None 18 4 0 FALSE 0 0 NA C coding 295 885 243 1127 PB.1420.1 chr2 + 1915 12 novel_not_in_catalog STAMBP novel NA NA NA NA no_subtype TRUE canonical NA NA 1560 None 6 5 1 TRUE 0 0 NA A coding 424 1272 51 1322 PB.6509.1 chr11 - 2647 17 novel_not_in_catalog CLPB novel NA NA NA NA no_subtype FALSE canonical NA NA 456 None 8 4 1 TRUE 0 0 NA A coding 677 2031 54 2084 PB.3692.3 chr5 - 6014 5 novel_not_in_catalog HNRNPH1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2411 None 2 45 0 TRUE 0 0 NA C coding 193 579 2186 2764 PB.4152.1 chr6 - 2038 7 full-splice_match IFNGR1 ENST00000367739.8 2139 7 92 9 no_subtype FALSE canonical NA NA 115 None 45 8 0 FALSE 0 0 NA C coding 489 1467 31 1497 PB.2343.1 chr3 - 2806 9 novel_not_in_catalog SENP7 novel NA NA NA NA no_subtype FALSE canonical NA NA 99 None 2 23 1 TRUE 0 0 NA A coding 268 804 60 863 PB.3345.5 chr5 + 2559 1 genic_intron novelGene_741 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4714.2 chr7 - 1824 8 full-splice_match MKRN1 ENST00000255977.6 3151 8 83 1244 no_subtype FALSE canonical NA NA 327 None 157 1 0 FALSE 0 0 NA C coding 482 1446 143 1588 PB.6774.1 chr12 + 1257 11 full-splice_match NDUFA9 ENST00000266544.9 8363 11 18 7088 no_subtype FALSE canonical NA NA 965 None 20 1 0 FALSE 0 0 NA A coding 377 1131 3 1133 PB.3684.2 chr5 - 1817 13 novel_not_in_catalog CLK4 novel NA NA NA NA no_subtype FALSE canonical NA NA 115 None 2 4 0 TRUE 0 0 NA B coding 453 1359 116 1474 PB.1455.2 chr2 + 2745 24 novel_not_in_catalog PTCD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2081 None 2 6 0 TRUE 0 0 NA B coding 495 1485 14 1498 PB.9885.6 chr19 - 1922 9 novel_in_catalog FKBP8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 256 None 6 1 0 FALSE 0 0 NA C coding 413 1239 282 1520 PB.8255.2 chr15 - 5846 5 novel_not_in_catalog STARD5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 440 None 2 30 2 TRUE 0 0 NA C coding 173 519 4150 4668 PB.8255.1 chr15 - 1950 6 full-splice_match STARD5 ENST00000302824.6 4871 6 -18 2939 no_subtype FALSE canonical NA NA 143 None 2 4 0 FALSE 0 0 NA C coding 213 639 45 683 PB.9885.2 chr19 - 1689 9 full-splice_match FKBP8 ENST00000608443.5 1849 9 156 4 no_subtype FALSE canonical NA NA 19 None 281 1 0 FALSE 0 0 NA C coding 413 1239 45 1283 PB.3902.1 chr6 - 3771 5 full-splice_match KCNK5 ENST00000359534.3 3756 5 -23 8 no_subtype FALSE canonical NA NA 548 None 21 22 0 FALSE 0 0 NA A coding 499 1497 363 1859 PB.7518.2 chr13 - 2756 1 novel_in_catalog DIS3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 19 0 FALSE 0 0 NA B coding 111 333 64 396 PB.3270.3 chr5 + 3488 12 novel_not_in_catalog GPBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2502 None 14 14 1 FALSE 0 0 NA C coding 473 1419 1240 2658 PB.3270.2 chr5 + 2852 12 full-splice_match GPBP1 ENST00000506184.6 2857 12 3 2 no_subtype FALSE canonical NA NA 2365 None 100 3 0 FALSE 0 0 NA C coding 473 1419 1103 2521 PB.3270.5 chr5 + 3074 13 novel_not_in_catalog GPBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2589 None 2 8 0 FALSE 0 0 NA C coding 493 1479 1267 2745 PB.3270.4 chr5 + 3426 13 full-splice_match GPBP1 ENST00000424459.7 4683 13 159 1098 no_subtype FALSE canonical NA NA 2438 None 31 4 0 FALSE 0 0 NA C coding 493 1479 1116 2594 PB.5387.1 chr9 - 2703 1 incomplete-splice_match CDC14B ENST00000412285.6 5271 15 2562 7 no_subtype FALSE canonical NA NA NA None 7 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3270.6 chr5 + 2930 13 novel_not_in_catalog GPBP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2446 None 2 6 1 TRUE 0 0 NA C coding 473 1419 1184 2602 PB.4708.3 chr7 + 3004 1 novel_in_catalog TBXAS1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 8 0 FALSE 0 0 NA B coding 73 219 223 441 PB.1455.1 chr2 + 2651 25 novel_not_in_catalog PTCD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1982 None 98 14 3 TRUE 0 0 NA B coding 419 1257 5 1261 PB.1139.1 chr1 - 2652 2 antisense novelGene_MTR_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1945 None 2 22 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.11033.1 chrX - 3467 2 genic_intron novelGene_696 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 880 None 2 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5130.4 chr8 + 2615 1 novel_in_catalog PHF20L1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7959.197 chr14 - 1528 8 fusion IGHG1,IGHV3-7,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 83 None 2 16 4 TRUE 0 0 NA B coding 196 588 807 1394 PB.1102.1 chr1 + 3307 2 genic RP4-803J11.2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1463 None 13 32 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.1178.1 chr2 - 2662 5 full-splice_match CMPK2 ENST00000256722.9 2884 5 212 10 no_subtype FALSE canonical NA NA 463 None 60 8 0 FALSE 0 0 NA A coding 59 177 959 1135 PB.10225.2 chr20 + 2731 10 intergenic novelGene_14 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1627 None 2 20 5 FALSE 0 0 NA B non_coding NA NA NA NA PB.8667.1 chr16 - 2843 2 full-splice_match B3GNT9 ENST00000449549.3 2917 2 46 28 no_subtype FALSE canonical NA NA 304 None 6 12 0 FALSE 0 0 NA A coding 402 1206 491 1696 PB.6097.1 chr10 - 2963 18 novel_not_in_catalog TUBGCP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 51 None 113 4 0 FALSE 0 0 NA B coding 902 2706 127 2832 PB.9413.1 chr17 - 2178 6 full-splice_match LGALS3BP ENST00000262776.7 2405 6 206 21 no_subtype FALSE canonical NA NA 80 None 60 4 1 FALSE 0 0 NA C coding 585 1755 104 1858 PB.6097.5 chr10 - 5530 20 novel_not_in_catalog TUBGCP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1577 None 2 32 2 TRUE 0 0 NA B coding 902 2706 2701 5406 PB.6998.15 chr12 + 1586 14 novel_not_in_catalog PCBP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1370 None 7 3 0 FALSE 0 0 NA C coding 219 657 348 1004 PB.9413.6 chr17 - 3653 5 novel_in_catalog LGALS3BP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 90 None 3 9 1 FALSE 0 0 NA C coding 391 1173 2161 3333 PB.2159.2 chr3 + 6288 23 novel_in_catalog PTPN23 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5555 None 4 13 0 FALSE 0 0 NA C coding 1239 3717 2316 6032 PB.4706.2 chr7 - 4266 1 incomplete-splice_match HIPK2 ENST00000406875.7 15049 15 4943 5841 no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA B coding 137 411 1163 1573 PB.2159.3 chr3 + 5230 25 full-splice_match PTPN23 ENST00000265562.4 5244 25 10 4 no_subtype FALSE canonical NA NA 4498 None 3 7 0 FALSE 0 0 NA C coding 1636 4908 68 4975 PB.6376.1 chr11 - 1400 10 full-splice_match EEF1G ENST00000329251.4 1523 10 111 12 no_subtype FALSE canonical NA NA 32 None 549 0 0 FALSE 0 0 NA C coding 437 1311 21 1331 PB.6376.2 chr11 - 1442 11 novel_not_in_catalog EEF1G novel NA NA NA NA no_subtype FALSE canonical NA NA 63 None 7 0 0 TRUE 0 0 NA C coding 317 951 415 1365 PB.9074.1 chr17 - 3861 26 full-splice_match MYO19 ENST00000614623.4 4054 26 181 12 no_subtype FALSE canonical NA NA 47 None 3 9 0 FALSE 0 0 NA A coding 970 2910 343 3252 PB.7068.1 chr12 - 1561 1 incomplete-splice_match CTDSP2 ENST00000398073.6 4795 8 3217 18 no_subtype FALSE canonical NA NA NA None 15 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7104.1 chr12 + 2913 30 novel_not_in_catalog NUP107 novel NA NA NA NA no_subtype TRUE canonical NA NA 2742 None 62 0 0 TRUE 0 0 NA A coding 925 2775 73 2847 PB.3683.1 chr5 + 1767 8 full-splice_match HNRNPAB ENST00000358344.7 1796 8 26 3 no_subtype FALSE canonical NA NA 1159 None 2 2 0 FALSE 0 0 NA A coding 332 996 232 1227 PB.3284.1 chr5 + 2836 2 genic_intron novelGene_587 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2810 None 2 20 0 FALSE 0 0 NA A coding 122 366 2069 2434 PB.2159.1 chr3 + 5627 24 novel_in_catalog PTPN23 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4895 None 9 8 0 FALSE 0 0 NA C coding 1239 3717 1656 5372 PB.9227.3 chr17 - 1599 1 incomplete-splice_match PPP1R9B ENST00000612501.1 4167 10 2563 6 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C coding 102 306 801 1106 PB.3579.9 chr5 - 2977 1 novel_in_catalog CD74 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 13 0 FALSE 0 0 NA C coding 87 261 76 336 PB.9227.1 chr17 - 2808 10 full-splice_match PPP1R9B ENST00000612501.1 4167 10 1353 6 no_subtype FALSE canonical NA NA 135 None 7 9 0 FALSE 0 0 NA C coding 341 1023 193 1215 PB.3032.1 chr4 + 2818 15 incomplete-splice_match KIAA1109 ENST00000388738.7 15574 84 1465 11291 internal_fragment FALSE canonical NA NA 2413 None 2 0 0 FALSE 0 0 NA B coding 887 2661 156 2816 PB.6956.1 chr12 + 3097 25 novel_in_catalog PRPF40B novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 2534 None 2 21 4 FALSE 0 0 NA A coding 865 2595 30 2624 PB.2736.7 chr4 + 2720 2 antisense novelGene_RP11-367J11.2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 874 None 6 23 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2736.1 chr4 + 5595 14 novel_not_in_catalog TBC1D14 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3749 None 7 29 1 TRUE 0 0 NA B coding 551 1653 153 1805 PB.2736.3 chr4 + 4001 13 novel_not_in_catalog TBC1D14 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2156 None 2 30 1 TRUE 0 0 NA B coding 413 1239 104 1342 PB.2088.2 chr3 + 1522 2 novel_not_in_catalog PDCD6IP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1446 None 4 5 0 TRUE 0 0 NA C coding 121 363 133 495 PB.6615.1