isoform chrom strand length exons structuralCategory associatedGene associatedTranscript refLength refExons diffToTSS diffToTTS subCategory RTS_stage AllCanonical Min_sample_cov MinCov MinCovPos sdCov FL nIndels nIndelsJunc bite isoExp geneExp ratioExp FSM_class coding ORFlength CDSlength CDSstart CDSend PB.8327.3 chr15 + 3822 2 genic_intron novelGene_917 novel NA NA NA NA no_subtype FALSE canonical NA NA 2280 None 3 33 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5395.2 chr9 + 1342 7 full-splice_match ANP32B ENST00000339399.4 1463 7 -9 130 no_subtype FALSE canonical NA NA 892 None 39 4 1 FALSE 0 0 NA A coding 251 753 205 957 PB.10565.1 chr21 + 2717 11 novel_not_in_catalog ETS2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1341 None 8 4 0 TRUE 0 0 NA A coding 469 1407 148 1554 PB.6592.2 chr11 - 2525 21 novel_not_in_catalog MRE11A novel NA NA NA NA no_subtype FALSE canonical NA NA 61 None 2 4 1 TRUE 0 0 NA B coding 708 2124 167 2290 PB.3189.2 chr5 - 2939 23 incomplete-splice_match MYO10 ENST00000513610.5 8038 41 -32 5131 internal_fragment FALSE canonical NA NA 508 None 14 2 0 FALSE 0 0 NA B coding 817 2451 488 2938 PB.7470.2 chr13 - 3707 16 full-splice_match LCP1 ENST00000323076.6 3787 16 78 2 no_subtype FALSE canonical NA NA 136 None 2221 5 0 FALSE 0 0 NA C coding 627 1881 161 2041 PB.2110.1 chr3 + 2751 11 full-splice_match ENTPD3 ENST00000301825.7 2819 11 65 3 no_subtype FALSE canonical NA NA 1406 None 4 8 1 FALSE 0 0 NA A coding 529 1587 54 1640 PB.3742.2 chr6 + 3097 3 genic_intron novelGene_98 novel NA NA NA NA no_subtype FALSE canonical NA NA 2905 None 10 50 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8351.8 chr16 + 3023 17 novel_not_in_catalog RHOT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2378 None 4 15 0 TRUE 0 0 NA B coding 323 969 69 1037 PB.8351.9 chr16 + 2868 19 novel_not_in_catalog RHOT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2218 None 2 13 0 TRUE 0 0 NA B coding 290 870 69 938 PB.6488.1 chr11 + 2013 11 novel_not_in_catalog ALDH3B1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1758 None 2 4 0 TRUE 0 0 NA A coding 387 1161 152 1312 PB.7752.1 chr14 + 3047 23 incomplete-splice_match SYNE2 ENST00000357395.7 21555 116 34 18474 3prime_fragment FALSE canonical NA NA 2959 None 19 2 0 FALSE 0 0 NA B coding 956 2868 179 3046 PB.8351.2 chr16 + 2492 20 novel_not_in_catalog RHOT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1802 None 5 7 1 TRUE 0 0 NA B coding 290 870 69 938 PB.8351.3 chr16 + 2852 19 novel_not_in_catalog RHOT2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2208 None 2 15 1 TRUE 0 0 NA B coding 285 855 91 945 PB.8351.1 chr16 + 2524 19 novel_not_in_catalog RHOT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1874 None 8 10 3 TRUE 0 0 NA B coding 269 807 440 1246 PB.8351.7 chr16 + 2948 18 novel_not_in_catalog RHOT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2305 None 2 17 1 TRUE 0 0 NA B coding 323 969 74 1042 PB.8351.4 chr16 + 3127 16 novel_not_in_catalog RHOT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2483 None 2 20 0 TRUE 0 0 NA B coding 196 588 555 1142 PB.8351.5 chr16 + 2555 20 novel_not_in_catalog RHOT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1916 None 2 15 3 TRUE 0 0 NA B coding 269 807 482 1288 PB.10650.1 chr22 + 5301 3 full-splice_match CRKL ENST00000354336.7 5325 3 20 4 no_subtype FALSE canonical NA NA 1266 None 8 21 0 FALSE 0 0 NA C coding 303 909 490 1398 PB.10650.2 chr22 + 3062 1 novel_in_catalog CRKL novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 9 18 0 FALSE 0 0 NA C coding 132 396 499 894 PB.10650.3 chr22 + 2789 1 incomplete-splice_match CRKL ENST00000354336.7 5325 3 2531 6 no_subtype FALSE canonical NA NA NA None 23 14 0 FALSE 0 0 NA C coding 127 381 1131 1511 PB.240.1 chr1 - 3256 6 novel_in_catalog TRIM62 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 65 None 2 10 0 FALSE 0 0 NA A coding 280 840 640 1479 PB.5555.1 chr9 - 2073 1 full-splice_match DOLK ENST00000372586.3 2090 1 14 3 no_subtype FALSE canonical NA NA NA None 4 1 0 FALSE 0 0 NA A coding 538 1614 303 1916 PB.1280.1 chr2 + 1376 7 full-splice_match QPCT ENST00000338415.7 1739 7 142 221 no_subtype FALSE canonical NA NA 956 None 39 0 0 FALSE 0 0 NA A coding 361 1083 17 1099 PB.4086.1 chr6 - 1744 1 antisense novelGene_RPF2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7836.1 chr14 - 3222 5 antisense novelGene_AHSA1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 103 None 2 26 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.7847.1 chr14 + 3543 17 full-splice_match ZC3H14 ENST00000251038.9 18281 17 119 14619 no_subtype FALSE canonical NA NA 2310 None 12 12 0 FALSE 0 0 NA C coding 736 2208 107 2314 PB.4689.1 chr7 - 2645 15 full-splice_match WDR91 ENST00000354475.4 4588 15 7 1936 no_subtype FALSE canonical NA NA 148 None 21 1 0 FALSE 0 0 NA A coding 747 2241 26 2266 PB.7847.2 chr14 + 3461 16 full-splice_match ZC3H14 ENST00000393514.9 2195 16 -106 -1160 no_subtype FALSE canonical NA NA 2235 None 6 12 0 FALSE 0 0 NA C coding 711 2133 107 2239 PB.2476.2 chr3 + 1430 1 incomplete-splice_match CDV3 ENST00000264993.7 3307 5 1875 3 no_subtype FALSE canonical NA NA NA None 129 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3680.1 chr5 + 1619 6 full-splice_match B4GALT7 ENST00000029410.9 1747 6 117 11 no_subtype FALSE canonical NA NA 822 None 20 7 0 FALSE 0 0 NA A coding 213 639 337 975 PB.2933.1 chr4 + 2796 11 novel_not_in_catalog ARHGAP24 novel NA NA NA NA no_subtype FALSE canonical NA NA 2058 None 2 5 0 TRUE 0 0 NA A coding 748 2244 56 2299 PB.7484.1 chr13 - 1376 1 novel_in_catalog LPAR6 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 10 1 0 FALSE 0 0 NA A coding 202 606 771 1376 PB.578.1 chr1 - 3257 5 full-splice_match SLC16A1 ENST00000369626.7 3910 5 136 517 no_subtype FALSE canonical NA NA 183 None 48 10 0 FALSE 0 0 NA A coding 500 1500 228 1727 PB.3372.2 chr5 + 3235 8 novel_not_in_catalog POLR3G novel NA NA NA NA no_subtype FALSE canonical NA NA 739 None 4 26 1 FALSE 0 0 NA A coding 223 669 155 823 PB.3372.3 chr5 + 1750 1 genic_intron novelGene_828 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2914.13 chr4 - 4137 27 novel_not_in_catalog SEC31A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 60 None 2 8 0 FALSE 0 0 NA C coding 1220 3660 65 3724 PB.5794.1 chr10 - 3698 20 novel_not_in_catalog ANK3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 660 None 2 23 2 TRUE 0 0 NA A coding 827 2481 645 3125 PB.8045.4 chr15 + 1619 1 novel_in_catalog PDIA3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10418.1 chr20 + 2671 17 novel_not_in_catalog PCIF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2179 None 110 3 1 FALSE 0 0 NA B coding 658 1974 293 2266 PB.8045.2 chr15 + 1261 10 incomplete-splice_match PDIA3 ENST00000300289.9 3727 13 46 2420 3prime_fragment FALSE canonical NA NA 1239 None 2 0 0 FALSE 0 0 NA C coding 386 1158 103 1260 PB.8045.3 chr15 - 2007 3 genic CATSPER2P1 novel NA NA NA NA no_subtype FALSE canonical NA NA 162 None 2 7 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.10418.4 chr20 + 3682 18 novel_not_in_catalog PCIF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3189 None 4 14 2 TRUE 0 0 NA B coding 550 1650 1769 3418 PB.8045.1 chr15 + 1819 13 full-splice_match PDIA3 ENST00000300289.9 3727 13 172 1736 no_subtype FALSE canonical NA NA 1380 None 303 2 0 FALSE 0 0 NA C coding 458 1374 118 1491 PB.3706.3 chr5 - 3025 2 full-splice_match TRIM52 ENST00000503005.1 370 2 -802 -1853 no_subtype FALSE canonical NA NA 1126 None 2 19 0 FALSE 0 0 NA C coding 272 816 314 1129 PB.5822.1 chr10 - 3060 7 novel_not_in_catalog LRRC20 novel NA NA NA NA no_subtype FALSE canonical NA NA 78 None 9 14 1 TRUE 0 0 NA A coding 184 552 142 693 PB.10446.1 chr20 - 5649 9 novel_not_in_catalog NFATC2 novel NA NA NA NA no_subtype TRUE canonical NA NA 86 None 2 32 2 TRUE 0 0 NA A coding 343 1029 113 1141 PB.2914.18 chr4 - 3783 25 novel_in_catalog SEC31A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 88 None 2 4 0 FALSE 0 0 NA C coding 1093 3279 93 3371 PB.2975.1 chr4 - 861 5 full-splice_match H2AFZ ENST00000296417.5 979 5 113 5 no_subtype FALSE canonical NA NA 108 None 8 0 0 FALSE 0 0 NA A coding 128 384 106 489 PB.6291.1 chr11 - 3152 10 novel_not_in_catalog TP53I11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 58 None 19 26 1 TRUE 0 0 NA B coding 189 567 167 733 PB.6291.2 chr11 - 3151 9 novel_not_in_catalog TP53I11 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 132 None 2 24 2 TRUE 0 0 NA B coding 189 567 164 730 PB.9157.1 chr17 - 3709 3 full-splice_match DUSP3 ENST00000226004.7 4110 3 41 360 no_subtype FALSE canonical NA NA 148 None 27 13 0 FALSE 0 0 NA A coding 185 555 24 578 PB.7470.1 chr13 - 1753 1 incomplete-splice_match LCP1 ENST00000323076.6 3787 16 2035 0 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5846.4 chr10 - 1704 12 novel_in_catalog ANXA7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 47 None 2 1 0 FALSE 0 0 NA C coding 291 873 519 1391 PB.10739.2 chr22 - 3444 12 novel_not_in_catalog IL2RB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 92 None 19 13 1 TRUE 0 0 NA B coding 551 1653 126 1778 PB.10739.3 chr22 - 3454 12 novel_not_in_catalog IL2RB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 92 None 7 13 1 TRUE 0 0 NA B coding 551 1653 126 1778 PB.1826.1 chr2 - 1660 4 full-splice_match METTL21A ENST00000406927.6 1103 4 64 -621 no_subtype FALSE canonical NA NA 50 None 4 11 0 FALSE 0 0 NA C coding 218 654 80 733 PB.5983.9 chr10 - 3475 16 full-splice_match MGEA5 ENST00000361464.7 5155 16 -24 1704 no_subtype FALSE canonical NA NA 619 None 5 3 0 FALSE 0 0 NA C coding 807 2421 748 3168 PB.5361.1 chr9 + 3694 2 intergenic novelGene_832 novel NA NA NA NA no_subtype TRUE canonical NA NA 2148 None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5569.4 chr9 + 6130 1 novel_in_catalog GPR107 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 39 0 FALSE 0 0 NA C coding 136 408 117 524 PB.678.11 chr1 - 3510 11 novel_in_catalog RFX5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 83 None 16 19 0 FALSE 0 0 NA C coding 616 1848 125 1972 PB.5569.2 chr9 + 1381 2 novel_not_in_catalog GPR107 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1270 None 3 8 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.5569.3 chr9 + 1763 3 novel_not_in_catalog GPR107 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 211 None 3 20 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.3706.2 chr5 - 3155 2 novel_not_in_catalog TRIM52 novel NA NA NA NA no_subtype FALSE canonical NA NA 1083 None 19 18 0 FALSE 0 0 NA C coding 277 831 271 1101 PB.5569.1 chr9 + 6722 18 full-splice_match GPR107 ENST00000347136.10 7209 18 481 6 no_subtype FALSE canonical NA NA 1588 None 4 35 0 FALSE 0 0 NA C coding 552 1656 27 1682 PB.1223.3 chr2 + 2908 5 novel_in_catalog RAB10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 394 None 5 3 0 FALSE 0 0 NA C coding 118 354 122 475 PB.9084.1 chr17 + 619 4 full-splice_match CISD3 ENST00000613478.1 2074 4 122 1333 no_subtype FALSE canonical NA NA 206 None 2 3 1 FALSE 0 0 NA A coding 127 381 3 383 PB.1223.1 chr2 + 3001 6 full-splice_match RAB10 ENST00000264710.4 3535 6 489 45 no_subtype FALSE canonical NA NA 529 None 275 3 0 FALSE 0 0 NA C coding 200 600 11 610 PB.8059.1 chr15 - 2339 9 full-splice_match GATM ENST00000396659.7 2597 9 253 5 no_subtype FALSE canonical NA NA 156 None 2 9 0 FALSE 0 0 NA A coding 423 1269 88 1356 PB.10283.2 chr20 - 3690 23 novel_not_in_catalog RRBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 879 None 2 8 3 FALSE 0 0 NA A coding 748 2244 945 3188 PB.1223.5 chr2 + 2575 2 novel_in_catalog RAB10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 104 None 2 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2969.3 chr4 - 1446 10 fusion ADH1B,ADH1A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 86 None 2 2 0 TRUE 0 0 NA A coding 375 1125 69 1193 PB.2969.2 chr4 - 1443 9 full-splice_match ADH1A ENST00000209668.2 1499 9 52 4 no_subtype FALSE canonical NA NA 80 None 9 9 0 FALSE 0 0 NA A coding 375 1125 63 1187 PB.2969.1 chr4 - 1450 10 fusion ADH1C,ADH1B,ADH1A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 87 None 48 2 0 TRUE 0 0 NA A coding 375 1125 70 1194 PB.7336.1 chr12 + 2490 6 full-splice_match BCL7A ENST00000261822.4 2581 6 67 24 no_subtype FALSE canonical NA NA 700 None 4 7 0 FALSE 0 0 NA A coding 210 630 140 769 PB.690.1 chr1 - 1615 14 full-splice_match ILF2 ENST00000361891.8 1659 14 36 8 no_subtype FALSE canonical NA NA 95 None 112 2 0 FALSE 0 0 NA A coding 390 1170 91 1260 PB.3925.1 chr6 - 2770 3 genic_intron novelGene_428 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1922 None 2 27 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.2969.4 chr4 - 1447 9 full-splice_match ADH1B ENST00000625860.2 4059 9 0 2612 no_subtype FALSE canonical NA NA 86 None 11 4 0 FALSE 0 0 NA A coding 375 1125 69 1193 PB.9051.1 chr17 + 3170 1 genic_intron novelGene_323 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 18 23 0 FALSE 0 0 NA A coding 34 102 313 414 PB.6882.1 chr12 - 1554 1 antisense novelGene_PPFIBP1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4647.1 chr7 + 2119 10 novel_not_in_catalog IRF5 novel NA NA NA NA no_subtype FALSE canonical NA NA 1312 None 2 12 1 FALSE 0 0 NA A coding 255 765 791 1555 PB.8628.1 chr16 + 6696 49 novel_not_in_catalog NLRC5 novel NA NA NA NA no_subtype TRUE canonical NA NA 5606 None 3 6 0 TRUE 0 0 NA B coding 1837 5511 205 5715 PB.7823.2 chr14 + 2856 3 full-splice_match FOS ENST00000555686.1 1496 3 -815 -545 no_subtype FALSE canonical NA NA 1409 None 2 4 0 FALSE 0 0 NA C coding 266 798 1251 2048 PB.7791.1 chr14 - 1326 8 full-splice_match MED6 ENST00000256379.9 1995 8 15 654 no_subtype FALSE canonical NA NA 37 None 3 3 0 FALSE 0 0 NA A coding 246 738 16 753 PB.4957.1 chr8 + 1661 1 genic_intron novelGene_629 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8492.1 chr16 + 2687 22 novel_not_in_catalog POLR3E novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2315 None 19 5 0 FALSE 0 0 NA B coding 708 2124 246 2369 PB.5238.3 chr9 - 2812 2 genic_intron novelGene_199 novel NA NA NA NA no_subtype FALSE canonical NA NA 2363 None 3 19 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5238.2 chr9 - 2766 11 full-splice_match MLLT3 ENST00000380338.8 6772 11 38 3968 no_subtype FALSE canonical NA NA 261 None 4 7 0 FALSE 0 0 NA C coding 568 1704 250 1953 PB.5238.1 chr9 - 1825 7 full-splice_match MLLT3 ENST00000380321.5 708 7 -2 -1115 no_subtype FALSE canonical NA NA 91 None 2 4 0 FALSE 0 0 NA C coding 162 486 185 670 PB.1053.1 chr1 + 2949 5 novel_not_in_catalog LYPLAL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1912 None 4 18 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.609.1 chr1 - 3120 14 full-splice_match GDAP2 ENST00000369443.9 8828 14 55 5653 no_subtype FALSE canonical NA NA 128 None 23 4 0 FALSE 0 0 NA C coding 497 1491 196 1686 PB.6690.1 chr11 - 2713 18 novel_not_in_catalog MCAM novel NA NA NA NA no_subtype FALSE canonical NA NA 99 None 4 13 2 TRUE 0 0 NA C coding 646 1938 33 1970 PB.6690.2 chr11 - 3321 16 full-splice_match MCAM ENST00000264036.5 3313 16 -14 6 no_subtype FALSE canonical NA NA 96 None 4 11 0 FALSE 0 0 NA C coding 646 1938 30 1967 PB.448.1 chr1 - 1549 1 full-splice_match RP11-486G15.2 ENST00000605506.1 1601 1 41 11 no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8402.1 chr16 + 3155 10 novel_not_in_catalog NAA60 novel NA NA NA NA no_subtype TRUE canonical NA NA 3084 None 2 15 1 TRUE 0 0 NA B coding 242 726 150 875 PB.7217.1 chr12 + 1757 4 novel_not_in_catalog TMEM263 novel NA NA NA NA no_subtype TRUE canonical NA NA 213 None 24 6 0 TRUE 0 0 NA A coding 116 348 150 497 PB.8402.2 chr16 + 1653 1 novel_in_catalog NAA60 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.11017.6 chrX - 1396 9 novel_not_in_catalog IL2RG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 155 None 4 0 0 TRUE 0 0 NA B coding 345 1035 41 1075 PB.8333.1 chr15 - 2675 2 genic SNRPA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 130 None 16 15 0 TRUE 0 0 NA C coding 23 69 276 344 PB.10422.1 chr20 + 1370 10 novel_not_in_catalog CD40 novel NA NA NA NA no_subtype FALSE canonical NA NA 741 None 18 3 0 TRUE 0 0 NA A coding 277 831 67 897 PB.4992.1 chr8 + 2422 4 genic_intron novelGene_753 novel NA NA NA NA no_subtype FALSE canonical NA NA 401 None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4534.1 chr7 - 2131 3 full-splice_match ZNF394 ENST00000337673.6 2179 3 11 37 no_subtype FALSE canonical NA NA 649 None 5 7 1 FALSE 0 0 NA A coding 561 1683 194 1876 PB.2567.1 chr3 + 1594 9 full-splice_match SERPINI1 ENST00000446050.6 1890 9 293 3 no_subtype FALSE canonical NA NA 1275 None 9 2 0 FALSE 0 0 NA A coding 410 1230 120 1349 PB.6038.1 chr10 + 1721 3 antisense novelGene_ABLIM1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 42 None 4 5 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6038.2 chr10 + 1032 2 antisense novelGene_ABLIM1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 21 None 3 5 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.8426.3 chr16 + 2243 10 novel_not_in_catalog PMM2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1561 None 2 17 1 TRUE 0 0 NA B coding 219 657 233 889 PB.8934.2 chr17 - 2924 24 novel_not_in_catalog ELAC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 286 None 2 7 1 FALSE 0 0 NA C coding 565 1695 803 2497 PB.8426.1 chr16 + 2162 9 novel_not_in_catalog PMM2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1480 None 6 15 1 TRUE 0 0 NA B coding 246 738 71 808 PB.9961.1 chr19 - 1518 2 genic ZNF585B novel NA NA NA NA no_subtype FALSE canonical NA NA 1241 None 2 15 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.5058.1 chr8 + 1476 11 full-splice_match DCAF13 ENST00000612750.4 1967 11 -5 496 no_subtype FALSE canonical NA NA 1313 None 29 0 0 FALSE 0 0 NA A coding 445 1335 64 1398 PB.4935.1 chr8 + 1490 5 novel_not_in_catalog CHCHD7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1007 None 8 7 1 TRUE 0 0 NA A coding 85 255 62 316 PB.2895.1 chr4 + 2755 2 genic_intron novelGene_725 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2475 None 2 16 0 FALSE 0 0 NA A coding 119 357 1119 1475 PB.11017.3 chrX - 1480 9 novel_not_in_catalog IL2RG novel NA NA NA NA no_subtype FALSE canonical NA NA 28 None 15 1 0 TRUE 0 0 NA B coding 369 1107 48 1154 PB.10967.1 chrX - 1418 11 full-splice_match WDR45 ENST00000376368.7 1381 11 24 -61 no_subtype FALSE canonical NA NA 155 None 24 1 0 FALSE 0 0 NA A coding 361 1083 173 1255 PB.9941.1 chr19 + 2595 22 novel_not_in_catalog HAUS5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2438 None 3 7 1 TRUE 0 0 NA A coding 616 1848 100 1947 PB.9941.2 chr19 + 1586 10 full-splice_match RBM42 ENST00000262633.8 1680 10 91 3 no_subtype FALSE canonical NA NA 1344 None 86 1 1 FALSE 0 0 NA C coding 480 1440 15 1454 PB.9941.3 chr19 + 1567 10 novel_not_in_catalog RBM42 novel NA NA NA NA no_subtype FALSE canonical NA NA 1326 None 76 2 1 FALSE 0 0 NA C coding 451 1353 84 1436 PB.9941.4 chr19 + 1587 9 novel_not_in_catalog RBM42 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1346 None 3 1 0 TRUE 0 0 NA C coding 456 1368 89 1456 PB.7207.5 chr12 - 2753 2 genic_intron novelGene_950 novel NA NA NA NA no_subtype FALSE canonical NA NA 278 None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7847.5 chr14 + 1822 1 genic_intron novelGene_799 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5689.2 chr10 - 2680 15 novel_not_in_catalog DCLRE1C novel NA NA NA NA no_subtype FALSE canonical NA NA 186 None 8 8 1 TRUE 0 0 NA B coding 692 2076 78 2153 PB.5689.1 chr10 - 3185 16 novel_not_in_catalog DCLRE1C novel NA NA NA NA no_subtype FALSE canonical NA NA 192 None 10 4 1 TRUE 0 0 NA B coding 725 2175 84 2258 PB.266.41 chr1 - 3343 19 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 12 5 1 TRUE 0 0 NA C coding 836 2508 570 3077 PB.8756.1 chr16 + 3757 10 novel_not_in_catalog VAT1L novel NA NA NA NA no_subtype FALSE canonical NA NA 1258 None 2 22 0 TRUE 0 0 NA A coding 419 1257 98 1354 PB.7851.2 chr14 - 2997 10 novel_not_in_catalog FOXN3 novel NA NA NA NA no_subtype FALSE canonical NA NA 143 None 15 13 0 FALSE 0 0 NA B coding 487 1461 273 1733 PB.7851.3 chr14 - 2984 9 novel_not_in_catalog FOXN3 novel NA NA NA NA no_subtype FALSE canonical NA NA 133 None 2 17 1 FALSE 0 0 NA B coding 487 1461 263 1723 PB.10336.1 chr20 + 646 4 full-splice_match DYNLRB1 ENST00000357156.6 675 4 15 14 no_subtype FALSE canonical NA NA 282 None 2 5 0 FALSE 0 0 NA C coding 96 288 36 323 PB.10302.1 chr20 + 878 5 novel_not_in_catalog CST7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 592 None 2 2 0 TRUE 0 0 NA A coding 167 501 167 667 PB.7851.8 chr14 - 2939 1 genic_intron novelGene_816 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.663.12 chr1 - 1628 2 novel_not_in_catalog CTSS novel NA NA NA NA no_subtype FALSE canonical NA NA 679 None 2 10 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.9926.1 chr19 + 2604 17 full-splice_match UBA2 ENST00000246548.8 4023 17 56 1363 no_subtype FALSE canonical NA NA 1755 None 66 0 0 FALSE 0 0 NA C coding 640 1920 15 1934 PB.9926.2 chr19 + 2644 1 novel_in_catalog UBA2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA C coding 128 384 40 423 PB.4693.1 chr7 + 1018 3 full-splice_match C7orf73 ENST00000507606.2 2450 3 -7 1439 no_subtype FALSE canonical NA NA 135 None 6 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7550.1 chr13 + 3916 16 novel_not_in_catalog FARP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2501 None 2 12 1 TRUE 0 0 NA A coding 829 2487 100 2586 PB.5870.1 chr10 - 6753 3 genic_intron novelGene_737 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2809 None 3 37 1 FALSE 0 0 NA A coding 135 405 3963 4367 PB.742.4 chr1 + 2929 14 novel_not_in_catalog SEMA4A novel NA NA NA NA no_subtype FALSE canonical NA NA 1600 None 2 8 0 TRUE 0 0 NA C coding 592 1776 415 2190 PB.678.15 chr1 - 6614 19 full-splice_match POGZ ENST00000271715.6 6626 19 4 8 no_subtype FALSE canonical NA NA 310 None 2 17 0 FALSE 0 0 NA C coding 1410 4230 312 4541 PB.8843.1 chr17 - 2670 3 genic_intron novelGene_24 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 144 None 2 14 1 FALSE 0 0 NA A coding 104 312 55 366 PB.2643.1 chr3 - 1288 2 genic_intron novelGene_1348 novel NA NA NA NA no_subtype TRUE canonical NA NA 840 None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.792.1 chr1 + 5826 5 genic_intron novelGene_1278 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5807 None 2 37 3 FALSE 0 0 NA A coding 162 486 3772 4257 PB.6573.2 chr11 - 3832 19 novel_not_in_catalog SYTL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 164 None 4 6 1 FALSE 0 0 NA A coding 573 1719 554 2272 PB.8478.4 chr16 + 1076 3 novel_in_catalog C16orf62 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 331 None 2 7 0 FALSE 0 0 NA C coding 96 288 140 427 PB.3712.1 chr6 - 1360 7 novel_not_in_catalog SERPINB6 novel NA NA NA NA no_subtype FALSE canonical NA NA 97 None 7 4 1 FALSE 0 0 NA A coding 193 579 108 686 PB.8478.1 chr16 + 3108 31 full-splice_match C16orf62 ENST00000417362.6 3115 31 0 7 no_subtype FALSE canonical NA NA 2803 None 25 0 0 FALSE 0 0 NA C coding 963 2889 11 2899 PB.9902.2 chr19 - 2733 1 full-splice_match TSSK6 ENST00000585580.3 1467 1 -444 -822 no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A coding 273 819 703 1521 PB.10053.1 chr19 + 2900 13 full-splice_match PPP1R37 ENST00000221462.8 3163 13 248 15 no_subtype FALSE canonical NA NA 2200 None 20 7 0 FALSE 0 0 NA A coding 691 2073 117 2189 PB.856.7 chr1 - 1181 7 full-splice_match SELL ENST00000463108.5 1346 7 89 76 no_subtype FALSE canonical NA NA 114 None 3 1 0 FALSE 0 0 NA C coding 369 1107 73 1179 PB.8418.1 chr16 + 5659 23 fusion MGRN1,NUDT16L1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5322 None 2 33 3 TRUE 0 0 NA A coding 576 1728 136 1863 PB.8418.2 chr16 + 1303 4 novel_not_in_catalog NUDT16L1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 963 None 4 6 1 TRUE 0 0 NA B coding 211 633 28 660 PB.8418.3 chr16 + 1342 5 novel_not_in_catalog NUDT16L1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 994 None 4 8 2 TRUE 0 0 NA B coding 192 576 10 585 PB.6801.4 chr12 - 3320 2 full-splice_match C1RL ENST00000539927.1 354 2 -110 -2856 no_subtype FALSE canonical NA NA 129 None 2 17 0 FALSE 0 0 NA C coding 138 414 59 472 PB.856.2 chr1 - 3010 9 novel_not_in_catalog SELL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 118 None 2 7 0 TRUE 0 0 NA C coding 332 996 77 1072 PB.856.1 chr1 - 1503 9 full-splice_match SELL ENST00000236147.4 2436 9 84 849 no_subtype FALSE canonical NA NA 119 None 543 1 0 FALSE 0 0 NA C coding 385 1155 78 1232 PB.7847.4 chr14 + 3055 15 full-splice_match ZC3H14 ENST00000556945.5 2075 15 44 -1024 no_subtype FALSE canonical NA NA 1891 None 9 10 0 FALSE 0 0 NA C coding 605 1815 81 1895 PB.8265.2 chr15 - 2851 3 genic RP11-182J1.3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 328 None 2 6 1 FALSE 0 0 NA A coding 149 447 1554 2000 PB.7551.4 chr13 - 1848 1 incomplete-splice_match STK24 ENST00000418038.5 2172 4 322 3 no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8265.1 chr15 + 3445 4 novel_not_in_catalog ZSCAN2 novel NA NA NA NA no_subtype TRUE canonical NA NA 3128 None 7 5 0 TRUE 0 0 NA A coding 613 1839 243 2081 PB.8583.1 chr16 + 2783 5 full-splice_match ZNF720 ENST00000529515.1 518 5 -53 -2212 no_subtype FALSE canonical NA NA 541 None 2 5 0 FALSE 0 0 NA A coding 541 1623 181 1803 PB.788.4 chr1 + 1646 8 novel_in_catalog NCSTN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 845 None 2 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2468.1 chr3 + 3656 29 full-splice_match IFT122 ENST00000347300.6 3841 29 180 5 no_subtype FALSE canonical NA NA 3485 None 18 0 0 FALSE 0 0 NA A coding 1182 3546 27 3572 PB.7008.7 chr12 + 966 2 full-splice_match HNRNPA1 ENST00000551665.1 925 2 -11 -30 no_subtype FALSE canonical NA NA 837 None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1247.9 chr2 + 2573 1 incomplete-splice_match FOSL2 ENST00000379619.5 5829 4 3253 4 no_subtype FALSE canonical NA NA NA None 6 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5171.1 chr8 - 2316 16 full-splice_match BOP1 ENST00000569669.5 2303 16 -16 3 no_subtype FALSE canonical NA NA 115 None 4 1 0 FALSE 0 0 NA A coding 746 2238 17 2254 PB.7008.4 chr12 + 1513 11 full-splice_match HNRNPA1 ENST00000340913.10 1842 11 -7 336 no_subtype FALSE canonical NA NA 1183 None 15 2 0 FALSE 0 0 NA C coding 372 1116 61 1176 PB.4651.2 chr7 + 4463 18 novel_not_in_catalog AHCYL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1791 None 4 18 0 TRUE 0 0 NA B coding 508 1524 272 1795 PB.6211.1 chr11 + 2569 19 novel_in_catalog ARNTL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2018 None 16 5 1 FALSE 0 0 NA A coding 625 1875 302 2176 PB.2694.1 chr3 - 1556 7 full-splice_match BDH1 ENST00000392378.6 3455 7 86 1813 no_subtype FALSE canonical NA NA 182 None 26 1 0 FALSE 0 0 NA A coding 343 1029 226 1254 PB.1247.3 chr2 + 5961 4 novel_not_in_catalog FOSL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 575 None 2 35 0 FALSE 0 0 NA C coding 287 861 231 1091 PB.1247.2 chr2 + 2984 3 novel_in_catalog FOSL2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 599 None 3 7 0 FALSE 0 0 NA C coding 159 477 246 722 PB.1247.5 chr2 + 7090 3 novel_not_in_catalog FOSL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2879 None 2 40 2 TRUE 0 0 NA C coding 108 324 82 405 PB.1247.4 chr2 + 5179 4 full-splice_match FOSL2 ENST00000436647.1 889 4 207 -4497 no_subtype FALSE canonical NA NA 419 None 13 27 0 FALSE 0 0 NA C coding 287 861 75 935 PB.3391.1 chr5 + 4370 18 full-splice_match LNPEP ENST00000231368.9 12752 18 641 7741 no_subtype TRUE canonical NA NA 2997 None 10 4 0 FALSE 0 0 NA A coding 1025 3075 52 3126 PB.483.1 chr1 + 1853 1 genic_intron novelGene_847 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5361.7 chr9 + 1852 9 novel_in_catalog SYK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1124 None 6 5 0 FALSE 0 0 NA C coding 394 1182 122 1303 PB.674.1 chr1 - 1940 3 full-splice_match LYSMD1 ENST00000368908.9 2479 3 535 4 no_subtype FALSE canonical NA NA 306 None 2 6 0 FALSE 0 0 NA A coding 227 681 127 807 PB.5143.1 chr8 - 2902 1 incomplete-splice_match SLC45A4 ENST00000519067.5 7483 7 4566 16 no_subtype FALSE canonical NA NA NA None 3 21 0 FALSE 0 0 NA A coding 120 360 536 895 PB.7012.3 chr12 - 4176 30 full-splice_match ITGA5 ENST00000293379.8 4444 30 240 28 no_subtype FALSE canonical NA NA 240 None 243 3 0 FALSE 0 0 NA C coding 1049 3147 23 3169 PB.3627.5 chr5 - 5569 5 novel_not_in_catalog CCNJL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 124 None 2 37 0 TRUE 0 0 NA B coding 99 297 5018 5314 PB.7012.6 chr12 - 3804 28 incomplete-splice_match ITGA5 ENST00000293379.8 4444 30 619 21 5prime_fragment FALSE canonical NA NA 105 None 8 4 0 FALSE 0 0 NA C coding 728 2184 607 2790 PB.2979.1 chr4 + 3301 19 novel_not_in_catalog BANK1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3057 None 3 6 1 TRUE 0 0 NA B coding 785 2355 225 2579 PB.8909.1 chr17 + 1746 11 full-splice_match WRAP53 ENST00000396463.6 1905 11 156 3 no_subtype FALSE canonical NA NA 1489 None 2 1 0 FALSE 0 0 NA A coding 548 1644 87 1730 PB.9954.1 chr19 - 2622 5 novel_not_in_catalog ZFP82 novel NA NA NA NA no_subtype FALSE canonical NA NA 176 None 7 4 1 FALSE 0 0 NA A coding 532 1596 255 1850 PB.7956.1 chr14 + 3229 24 novel_not_in_catalog PACS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2592 None 2 10 2 FALSE 0 0 NA A coding 324 972 38 1009 PB.654.1 chr1 + 2697 18 full-splice_match TARS2 ENST00000369064.7 2729 18 22 10 no_subtype FALSE canonical NA NA 2020 None 34 4 0 FALSE 0 0 NA A coding 718 2154 13 2166 PB.3776.1 chr6 + 3258 18 novel_not_in_catalog CDKAL1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1711 None 10 13 0 TRUE 0 0 NA A coding 579 1737 164 1900 PB.957.1 chr1 + 3527 24 full-splice_match IPO9 ENST00000361565.8 11435 24 57 7851 no_subtype FALSE canonical NA NA 3027 None 46 0 0 FALSE 0 0 NA A coding 1041 3123 13 3135 PB.1800.2 chr2 - 3750 16 novel_in_catalog TRAK2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 91 None 12 1 0 FALSE 0 0 NA C coding 914 2742 291 3032 PB.10842.3 chr22 - 3165 20 novel_not_in_catalog SBF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 88 None 2 2 1 TRUE 0 0 NA B coding 358 1074 70 1143 PB.10842.1 chr22 - 5438 21 novel_not_in_catalog SBF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 182 None 2 45 3 TRUE 0 0 NA B coding 622 1866 842 2707 PB.1917.2 chr2 + 1641 6 novel_not_in_catalog PTMA novel NA NA NA NA no_subtype FALSE canonical NA NA 910 None 7 16 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.4486.1 chr7 - 3067 18 novel_not_in_catalog SEMA3A novel NA NA NA NA no_subtype FALSE canonical NA NA 342 None 5 2 1 TRUE 0 0 NA A coding 771 2313 231 2543 PB.10842.6 chr22 - 5847 40 novel_not_in_catalog SBF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 139 None 2 6 1 TRUE 0 0 NA B coding 1557 4671 869 5539 PB.10842.5 chr22 - 3386 22 novel_not_in_catalog SBF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 44 None 2 0 0 TRUE 0 0 NA B coding 1014 3042 35 3076 PB.10842.4 chr22 - 5541 23 novel_not_in_catalog SBF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 47 None 2 55 5 TRUE 0 0 NA B coding 552 1656 49 1704 PB.8211.5 chr15 + 2807 2 incomplete-splice_match C15orf39 ENST00000394987.4 4430 3 1619 4 internal_fragment FALSE canonical NA NA 1390 None 14 10 0 FALSE 0 0 NA C coding 548 1644 112 1755 PB.8211.4 chr15 + 4473 3 novel_in_catalog C15orf39 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3056 None 8 17 0 FALSE 0 0 NA C coding 938 2814 229 3042 PB.8211.3 chr15 + 4387 3 full-splice_match C15orf39 ENST00000394987.4 4430 3 38 5 no_subtype FALSE canonical NA NA 2971 None 29 13 0 FALSE 0 0 NA C coding 1047 3141 196 3336 PB.8211.2 chr15 + 3692 2 novel_in_catalog C15orf39 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 171 None 15 8 0 FALSE 0 0 NA C coding 938 2814 222 3035 PB.8211.1 chr15 + 3585 3 novel_not_in_catalog C15orf39 novel NA NA NA NA no_subtype FALSE canonical NA NA 3027 None 2 8 1 FALSE 0 0 NA C coding 953 2859 241 3099 PB.6306.1 chr11 + 1475 4 full-splice_match C11orf49 ENST00000532840.5 719 4 19 -775 no_subtype FALSE canonical NA NA 307 None 2 3 0 FALSE 0 0 NA A coding 148 444 28 471 PB.1465.1 chr2 + 2807 1 incomplete-splice_match RMND5A ENST00000283632.4 6301 9 3492 3 no_subtype FALSE canonical NA NA NA None 4 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5926.1 chr10 - 3474 1 antisense novelGene_FFAR4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 26 0 FALSE 0 0 NA A coding 150 450 2239 2688 PB.2365.1 chr3 + 3842 17 novel_not_in_catalog CD96 novel NA NA NA NA no_subtype FALSE canonical NA NA 3541 None 2 10 0 TRUE 0 0 NA B coding 569 1707 37 1743 PB.2227.1 chr3 - 1680 4 full-splice_match ABHD14B ENST00000361143.9 1636 4 -13 -31 no_subtype FALSE canonical NA NA 115 None 63 12 0 FALSE 0 0 NA A coding 210 630 144 773 PB.2365.3 chr3 + 3241 18 novel_not_in_catalog CD96 novel NA NA NA NA no_subtype FALSE canonical NA NA 2968 None 2 7 0 TRUE 0 0 NA B coding 569 1707 12 1718 PB.7256.2 chr12 - 1519 8 full-splice_match PPP1CC ENST00000340766.9 1472 8 48 -95 no_subtype FALSE canonical NA NA 239 None 4 2 0 FALSE 0 0 NA C coding 337 1011 185 1195 PB.341.1 chr1 + 1554 14 full-splice_match NASP ENST00000351223.7 1538 14 -20 4 no_subtype FALSE canonical NA NA 1371 None 17 1 0 FALSE 0 0 NA C coding 449 1347 103 1449 PB.341.2 chr1 + 2075 13 novel_in_catalog NASP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1242 None 5 7 0 FALSE 0 0 NA C coding 406 1218 103 1320 PB.4455.1 chr7 + 1681 1 full-splice_match CLDN4 ENST00000340958.3 1831 1 135 15 no_subtype FALSE canonical NA NA NA None 260 4 0 FALSE 0 0 NA A coding 206 618 214 831 PB.6104.1 chr11 + 526 2 full-splice_match IFITM1 ENST00000408968.3 855 2 327 2 no_subtype FALSE canonical NA NA 177 None 5 1 0 FALSE 0 0 NA A coding 58 174 193 366 PB.2224.1 chr3 + 1366 7 novel_not_in_catalog TEX264 novel NA NA NA NA no_subtype FALSE canonical NA NA 778 None 11 0 0 TRUE 0 0 NA A coding 313 939 127 1065 PB.3669.2 chr5 - 1533 7 full-splice_match RAB24 ENST00000478234.5 1820 7 25 262 no_subtype FALSE canonical NA NA 537 None 38 5 0 FALSE 0 0 NA C coding 184 552 421 972 PB.2883.2 chr4 - 3081 22 full-splice_match SDAD1 ENST00000395710.5 3080 22 -16 15 no_subtype TRUE canonical NA NA 203 None 8 7 0 FALSE 0 0 NA C coding 590 1770 480 2249 PB.10121.3 chr19 - 2498 2 full-splice_match NUP62 ENST00000422090.2 3479 2 240 741 no_subtype FALSE canonical NA NA 179 None 8 14 0 FALSE 0 0 NA C coding 522 1566 257 1822 PB.2883.1 chr4 - 3004 22 full-splice_match SDAD1 ENST00000356260.9 3017 22 6 7 no_subtype FALSE canonical NA NA 203 None 18 7 0 FALSE 0 0 NA C coding 687 2061 114 2174 PB.2551.6 chr3 - 4013 11 novel_in_catalog CCNL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 352 None 2 14 0 FALSE 0 0 NA C coding 299 897 2674 3570 PB.2551.7 chr3 - 2817 8 novel_in_catalog CCNL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 356 None 7 6 0 FALSE 0 0 NA C coding 172 516 54 569 PB.2551.4 chr3 - 3623 11 novel_in_catalog CCNL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 356 None 3 6 0 FALSE 0 0 NA C coding 299 897 2284 3180 PB.10121.2 chr19 - 3120 4 novel_not_in_catalog NUP62 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 111 None 3 25 2 TRUE 0 0 NA C coding 522 1566 189 1754 PB.3637.2 chr5 - 635 2 genic_intron novelGene_1298 novel NA NA NA NA no_subtype FALSE canonical NA NA 158 None 3 6 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8065.1 chr15 - 2899 16 full-splice_match MYEF2 ENST00000267836.10 2958 16 57 2 no_subtype FALSE canonical NA NA 220 None 2 11 0 FALSE 0 0 NA A coding 576 1728 60 1787 PB.2551.8 chr3 - 2892 8 novel_in_catalog CCNL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 356 None 4 11 1 FALSE 0 0 NA C coding 172 516 54 569 PB.1496.2 chr2 - 2644 11 incomplete-splice_match TMEM131 ENST00000186436.9 6640 41 3994 2 5prime_fragment FALSE canonical NA NA 379 None 3 7 0 FALSE 0 0 NA B coding 530 1590 295 1884 PB.373.3 chr1 + 3016 5 novel_not_in_catalog SCP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2014 None 4 13 0 FALSE 0 0 NA C coding 121 363 85 447 PB.10121.1 chr19 - 3132 3 novel_not_in_catalog NUP62 novel NA NA NA NA no_subtype FALSE canonical NA NA 113 None 48 23 1 TRUE 0 0 NA C coding 522 1566 191 1756 PB.373.1 chr1 + 2622 16 full-splice_match SCP2 ENST00000371514.7 2811 16 103 86 no_subtype FALSE canonical NA NA 1613 None 63 6 0 FALSE 0 0 NA C coding 547 1641 66 1706 PB.6563.1 chr11 - 2456 14 full-splice_match NARS2 ENST00000281038.9 2519 14 48 15 no_subtype FALSE canonical NA NA 469 None 2 19 1 FALSE 0 0 NA A coding 477 1431 329 1759 PB.4023.4 chr6 + 2656 10 novel_not_in_catalog ZNF292 novel NA NA NA NA no_subtype TRUE canonical NA NA 1154 None 2 9 1 TRUE 0 0 NA C coding 344 1032 11 1042 PB.4023.5 chr6 + 3126 1 incomplete-splice_match ZNF292 ENST00000369577.7 10610 8 6769 716 no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA C coding 422 1266 178 1443 PB.4023.2 chr6 + 2773 4 novel_not_in_catalog ZNF292 novel NA NA NA NA no_subtype FALSE canonical NA NA 602 None 9 18 1 TRUE 0 0 NA C coding 154 462 26 487 PB.4023.1 chr6 + 7022 8 full-splice_match ZNF292 ENST00000369577.7 10610 8 18 3570 no_subtype FALSE canonical NA NA 1045 None 5 5 0 FALSE 0 0 NA C coding 2332 6996 26 7021 PB.10745.2 chr22 + 2990 18 novel_not_in_catalog GGA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2029 None 3 7 0 FALSE 0 0 NA C coding 566 1698 440 2137 PB.10745.1 chr22 + 2784 17 full-splice_match GGA1 ENST00000343632.8 3159 17 371 4 no_subtype FALSE canonical NA NA 1824 None 69 5 0 FALSE 0 0 NA C coding 635 1905 28 1932 PB.1899.1 chr2 + 1683 7 full-splice_match MFF ENST00000354503.10 1085 7 18 -616 no_subtype FALSE canonical NA NA 837 None 9 2 0 FALSE 0 0 NA C coding 218 654 313 966 PB.3669.1 chr5 - 1316 8 full-splice_match RAB24 ENST00000303251.10 1311 8 -1 -4 no_subtype FALSE canonical NA NA 538 None 8 3 0 FALSE 0 0 NA C coding 203 609 422 1030 PB.2914.11 chr4 - 3810 27 novel_not_in_catalog SEC31A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 60 None 3 7 1 TRUE 0 0 NA C coding 873 2619 65 2683 PB.2914.10 chr4 - 3973 26 novel_in_catalog SEC31A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 18 None 2 8 2 FALSE 0 0 NA C coding 1151 3453 108 3560 PB.6432.1 chr11 + 2398 11 full-splice_match DPF2 ENST00000528416.5 2799 11 125 276 no_subtype FALSE canonical NA NA 1107 None 17 5 0 FALSE 0 0 NA A coding 391 1173 9 1181 PB.1907.2 chr2 + 2951 21 novel_not_in_catalog SP140L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2022 None 2 9 1 TRUE 0 0 NA B coding 370 1110 78 1187 PB.2914.17 chr4 - 3990 25 novel_in_catalog SEC31A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 36 None 2 9 2 FALSE 0 0 NA C coding 1151 3453 126 3578 PB.7833.1 chr14 + 5902 1 antisense novelGene_TMED8_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 38 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4158.1 chr6 + 730 3 full-splice_match ABRACL ENST00000367660.3 845 3 108 7 no_subtype FALSE canonical NA NA 153 None 2 5 1 FALSE 0 0 NA A coding 81 243 93 335 PB.1907.4 chr2 + 1480 15 fusion SP140L,SP100 novel NA NA NA NA no_subtype FALSE canonical NA NA 1435 None 2 1 0 FALSE 0 0 NA B coding 441 1323 157 1479 PB.1907.5 chr2 + 3552 25 fusion SP140L,SP100 novel NA NA NA NA no_subtype FALSE canonical NA NA 3198 None 2 11 2 TRUE 0 0 NA B coding 789 2367 157 2523 PB.6793.2 chr12 - 1171 3 novel_in_catalog SPSB2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 54 None 2 5 1 FALSE 0 0 NA B coding 263 789 140 928 PB.2914.15 chr4 - 4166 27 novel_in_catalog SEC31A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 137 None 7 5 0 FALSE 0 0 NA C coding 1205 3615 139 3753 PB.6793.1 chr12 - 1432 2 novel_in_catalog SPSB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1062 None 4 10 0 FALSE 0 0 NA B coding 263 789 399 1187 PB.428.1 chr1 - 3293 1 genic_intron novelGene_660 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A coding 76 228 84 311 PB.2559.1 chr3 - 3903 20 full-splice_match IFT80 ENST00000326448.11 4306 20 339 64 no_subtype FALSE canonical NA NA 48 None 2 9 0 FALSE 0 0 NA A coding 777 2331 95 2425 PB.7725.2 chr14 + 805 5 incomplete-splice_match KTN1 ENST00000555573.5 1712 12 905 2 internal_fragment FALSE canonical NA NA 329 None 2 2 1 FALSE 0 0 NA A coding 34 102 230 331 PB.971.2 chr1 - 1931 8 novel_not_in_catalog ADIPOR1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 85 None 2 8 2 TRUE 0 0 NA C coding 228 684 514 1197 PB.971.1 chr1 - 1391 8 full-splice_match ADIPOR1 ENST00000340990.9 2177 8 98 688 no_subtype FALSE canonical NA NA 107 None 85 1 1 FALSE 0 0 NA C coding 375 1125 202 1326 PB.3552.3 chr5 + 2853 8 novel_not_in_catalog RNF14 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1418 None 10 9 1 TRUE 0 0 NA B coding 348 1044 430 1473 PB.8503.1 chr16 + 2117 10 full-splice_match PLK1 ENST00000300093.8 2227 10 106 4 no_subtype TRUE canonical NA NA 1613 None 9 2 0 FALSE 0 0 NA A coding 603 1809 6 1814 PB.971.4 chr1 - 3070 3 novel_not_in_catalog ADIPOR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1913 None 2 12 0 TRUE 0 0 NA C coding 105 315 1968 2282 PB.3243.10 chr5 + 6106 2 novel_not_in_catalog PARP8 novel NA NA NA NA no_subtype FALSE canonical NA NA 1178 None 2 44 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.6408.1 chr11 + 760 6 full-splice_match PRDX5 ENST00000265462.8 893 6 120 13 no_subtype FALSE canonical NA NA 547 None 4 3 0 FALSE 0 0 NA A coding 162 486 165 650 PB.2914.19 chr4 - 4010 25 novel_not_in_catalog SEC31A novel NA NA NA NA no_subtype FALSE canonical NA NA 106 None 2 8 1 TRUE 0 0 NA C coding 1110 3330 269 3598 PB.9056.1 chr17 + 3954 20 full-splice_match LIG3 ENST00000378526.8 8400 20 18 4428 no_subtype FALSE canonical NA NA 2911 None 3 5 0 FALSE 0 0 NA A coding 1009 3027 116 3142 PB.5160.1 chr8 - 4068 1 incomplete-splice_match PLEC ENST00000398774.6 14646 32 10573 6 no_subtype FALSE canonical NA NA NA None 92 6 0 FALSE 0 0 NA B coding 963 2889 159 3047 PB.10989.1 chrX - 1554 1 genic_intron novelGene_527 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5159.1 chr8 - 4268 1 incomplete-splice_match PLEC ENST00000398774.6 14646 32 10377 2 no_subtype FALSE canonical NA NA NA None 5 11 0 FALSE 0 0 NA B coding 1050 3150 94 3243 PB.10782.5 chr22 + 2758 23 novel_not_in_catalog SGSM3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2332 None 6 10 1 TRUE 0 0 NA B coding 741 2223 185 2407 PB.7488.2 chr13 - 1860 3 genic_intron novelGene_489 novel NA NA NA NA no_subtype TRUE canonical NA NA 41 None 2 7 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.1519.1 chr2 + 3470 1 genic_intron novelGene_928 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10892.1 chrX - 2761 8 novel_not_in_catalog EIF1AX novel NA NA NA NA no_subtype FALSE canonical NA NA 197 None 11 23 1 TRUE 0 0 NA C coding 144 432 182 613 PB.10892.2 chrX - 1547 7 full-splice_match EIF1AX ENST00000379607.9 4427 7 13 2867 no_subtype FALSE canonical NA NA 207 None 14 13 0 FALSE 0 0 NA C coding 144 432 192 623 PB.6892.1 chr12 + 3927 28 novel_not_in_catalog DDX11 novel NA NA NA NA no_subtype TRUE canonical NA NA 2947 None 2 8 0 TRUE 0 0 NA A coding 906 2718 257 2974 PB.1372.2 chr2 + 2018 10 full-splice_match UGP2 ENST00000337130.9 2338 10 314 6 no_subtype FALSE canonical NA NA 1581 None 9 5 1 FALSE 0 0 NA C coding 508 1524 163 1686 PB.1865.1 chr2 + 4121 19 novel_not_in_catalog TTLL4 novel NA NA NA NA no_subtype FALSE canonical NA NA 3668 None 2 11 1 FALSE 0 0 NA B coding 494 1482 2257 3738 PB.9415.2 chr17 + 2783 4 full-splice_match C1QTNF1 ENST00000354124.7 2714 4 -73 4 no_subtype FALSE canonical NA NA 537 None 2 11 0 FALSE 0 0 NA C coding 281 843 243 1085 PB.9415.3 chr17 + 2787 4 full-splice_match C1QTNF1 ENST00000579760.5 1672 4 193 -1308 no_subtype FALSE canonical NA NA 541 None 82 11 0 FALSE 0 0 NA C coding 281 843 247 1089 PB.9168.2 chr17 - 1555 12 full-splice_match SLC25A39 ENST00000377095.9 1565 12 14 -4 no_subtype FALSE canonical NA NA 91 None 131 1 1 FALSE 0 0 NA C coding 359 1077 107 1183 PB.10662.17 chr22 + 841 5 fusion IGLV2-8,IGLL5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 390 None 2 15 1 TRUE 0 0 NA A coding 107 321 40 360 PB.10662.16 chr22 + 830 4 novel_not_in_catalog IGLV3-9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 382 None 3 12 1 TRUE 0 0 NA A coding 224 672 28 699 PB.10662.15 chr22 + 863 4 novel_not_in_catalog IGLV3-10 novel NA NA NA NA no_subtype FALSE canonical NA NA 414 None 3 5 1 TRUE 0 0 NA A coding 141 423 38 460 PB.10662.14 chr22 + 848 6 fusion IGLV2-18,IGLL5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 395 None 47 7 1 TRUE 0 0 NA A coding 118 354 39 392 PB.10662.13 chr22 + 898 4 novel_not_in_catalog IGLV1-36 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 441 None 3 2 1 TRUE 0 0 NA A coding 127 381 49 429 PB.10662.12 chr22 + 889 7 fusion IGLV1-40,IGLL5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 441 None 3 17 4 TRUE 0 0 NA A coding 121 363 396 758 PB.10662.11 chr22 + 846 5 novel_not_in_catalog IGLV7-43 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 391 None 10 10 2 TRUE 0 0 NA A coding 225 675 36 710 PB.10662.10 chr22 + 838 6 fusion IGLV5-45,IGLL5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 385 None 3 18 3 TRUE 0 0 NA A coding 133 399 304 702 PB.6518.1 chr11 - 3845 1 incomplete-splice_match FAM168A ENST00000064778.8 7296 9 3130 322 no_subtype FALSE canonical NA NA NA None 2 30 0 FALSE 0 0 NA A coding 119 357 2617 2973 PB.9820.1 chr19 - 1322 1 incomplete-splice_match PRKACA ENST00000308677.8 2677 10 1342 14 no_subtype FALSE canonical NA NA NA None 7 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2739.2 chr4 - 3547 18 novel_not_in_catalog AFAP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 163 None 17 16 0 TRUE 0 0 NA A coding 730 2190 166 2355 PB.979.1 chr1 - 1514 1 genic_intron novelGene_1379 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2544.3 chr3 + 3510 24 novel_not_in_catalog MME novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2284 None 3 2 1 FALSE 0 0 NA B coding 750 2250 132 2381 PB.3252.1 chr5 + 3205 2 full-splice_match SNX18 ENST00000381410.4 5218 2 36 1977 no_subtype FALSE canonical NA NA 1775 None 30 7 0 FALSE 0 0 NA A coding 624 1872 155 2026 PB.7795.1 chr14 + 1624 12 incomplete-splice_match RBM25 ENST00000261973.11 6910 19 96 5190 3prime_fragment FALSE canonical NA NA 1566 None 3 0 0 FALSE 0 0 NA B coding 478 1434 190 1623 PB.9168.6 chr17 - 1900 12 novel_not_in_catalog SLC25A39 novel NA NA NA NA no_subtype FALSE canonical NA NA 433 None 2 8 1 FALSE 0 0 NA C coding 359 1077 449 1525 PB.9840.2 chr19 + 3509 13 novel_not_in_catalog CYP4F3 novel NA NA NA NA no_subtype TRUE canonical NA NA 2610 None 4 6 0 FALSE 0 0 NA B coding 408 1224 1550 2773 PB.9840.3 chr19 + 2495 14 novel_in_catalog CYP4F3 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1592 None 2 6 1 FALSE 0 0 NA B coding 434 1302 454 1755 PB.9168.5 chr17 - 1785 11 novel_in_catalog SLC25A39 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 116 None 2 18 0 FALSE 0 0 NA C coding 175 525 886 1410 PB.1859.4 chr2 + 1985 15 full-splice_match SLC11A1 ENST00000233202.10 3852 15 266 1601 no_subtype FALSE canonical NA NA 1616 None 36 3 0 FALSE 0 0 NA C coding 550 1650 75 1724 PB.1633.10 chr2 + 1519 1 antisense novelGene_ZEB2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 15 3 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10644.1 chr22 + 3113 5 full-splice_match ZNF74 ENST00000400451.6 3159 5 42 4 no_subtype FALSE canonical NA NA 815 None 6 2 0 FALSE 0 0 NA A coding 644 1932 473 2404 PB.9409.1 chr17 - 1579 1 novel_in_catalog CYTH1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10312.6 chr20 - 3817 1 genic_intron novelGene_308 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A coding 103 309 1995 2303 PB.10312.4 chr20 - 2583 3 novel_in_catalog BCL2L1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 284 None 15 8 0 FALSE 0 0 NA C coding 233 699 397 1095 PB.2210.1 chr3 - 2865 1 genic NAT6 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA A coding 286 858 1799 2656 PB.5449.6 chr9 - 2876 26 incomplete-splice_match FKBP15 ENST00000238256.7 4336 28 65 1395 internal_fragment FALSE canonical NA NA 106 None 2 1 0 FALSE 0 0 NA C coding 941 2823 54 2876 PB.3669.5 chr5 - 1453 8 novel_in_catalog RAB24 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 308 None 15 4 0 FALSE 0 0 NA C coding 184 552 341 892 PB.4591.1 chr7 - 2093 5 full-splice_match SYPL1 ENST00000455385.6 2151 5 48 10 no_subtype FALSE canonical NA NA 144 None 2 6 0 FALSE 0 0 NA C coding 241 723 76 798 PB.4943.1 chr8 + 3209 9 novel_not_in_catalog RAB2A novel NA NA NA NA no_subtype TRUE canonical NA NA 789 None 4 13 0 TRUE 0 0 NA B coding 166 498 385 882 PB.5598.3 chr9 - 3477 19 novel_not_in_catalog RALGDS novel NA NA NA NA no_subtype FALSE canonical NA NA 191 None 3 10 1 TRUE 0 0 NA B coding 683 2049 670 2718 PB.4943.2 chr8 + 2835 3 novel_not_in_catalog RAB2A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2619 None 2 26 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.1386.1 chr2 - 4442 6 full-splice_match SPRED2 ENST00000356388.8 4097 6 -348 3 no_subtype FALSE canonical NA NA 564 None 2 13 0 FALSE 0 0 NA A coding 418 1254 539 1792 PB.4943.4 chr8 + 2553 1 genic_intron novelGene_577 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4474.1 chr7 - 1573 2 full-splice_match FGL2 ENST00000248598.5 4261 2 -58 2746 no_subtype FALSE canonical NA NA 704 None 199 0 0 FALSE 0 0 NA C coding 439 1317 92 1408 PB.4581.3 chr7 - 2897 1 novel_in_catalog ORC5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 22 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1921.3 chr2 + 5795 30 novel_not_in_catalog GIGYF2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3986 None 2 9 2 TRUE 0 0 NA B coding 1300 3900 152 4051 PB.9024.8 chr17 - 1393 1 novel_in_catalog SSH2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.592.2 chr1 - 4088 20 full-splice_match CSDE1 ENST00000358528.8 4076 20 -21 9 no_subtype FALSE canonical NA NA 61 None 8 7 0 FALSE 0 0 NA C coding 798 2394 449 2842 PB.1921.4 chr2 + 2813 2 genic_intron novelGene_1413 novel NA NA NA NA no_subtype FALSE canonical NA NA 1893 None 2 21 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6388.1 chr11 + 1566 4 novel_not_in_catalog TTC9C novel NA NA NA NA no_subtype TRUE canonical NA NA 1338 None 2 5 0 TRUE 0 0 NA A coding 171 513 346 858 PB.9024.1 chr17 - 2758 1 incomplete-splice_match SSH2 ENST00000269033.7 9327 15 5300 1270 no_subtype FALSE canonical NA NA NA None 14 22 0 FALSE 0 0 NA B coding 100 300 998 1297 PB.9024.4 chr17 - 5525 14 novel_in_catalog SSH2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 283 None 11 8 0 FALSE 0 0 NA B coding 1430 4290 156 4445 PB.9024.5 chr17 - 5555 15 novel_not_in_catalog SSH2 novel NA NA NA NA no_subtype FALSE canonical NA NA 127 None 2 8 0 TRUE 0 0 NA B coding 1417 4251 106 4356 PB.1814.1 chr2 + 1740 1 genic_intron novelGene_1384 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3619.2 chr5 - 3417 12 full-splice_match CLINT1 ENST00000411809.6 3440 12 17 6 no_subtype FALSE canonical NA NA 229 None 75 8 0 FALSE 0 0 NA C coding 625 1875 189 2063 PB.9883.1 chr19 - 1789 11 full-splice_match ISYNA1 ENST00000338128.12 2420 11 197 434 no_subtype FALSE canonical NA NA 12 None 10 4 1 FALSE 0 0 NA A coding 558 1674 22 1695 PB.3619.1 chr5 - 3360 12 full-splice_match CLINT1 ENST00000523908.5 2346 12 -16 -998 no_subtype FALSE canonical NA NA 230 None 24 9 0 FALSE 0 0 NA C coding 643 1929 190 2118 PB.5026.1 chr8 - 3097 1 incomplete-splice_match UQCRB ENST00000287022.9 5575 4 1719 760 no_subtype FALSE canonical NA NA NA None 6 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5172.1 chr8 + 2127 13 full-splice_match HSF1 ENST00000528838.5 2142 13 7 8 no_subtype FALSE canonical NA NA 1537 None 16 5 0 FALSE 0 0 NA C coding 529 1587 154 1740 PB.10798.1 chr22 - 1455 3 full-splice_match SNU13 ENST00000355257.7 1503 3 25 23 no_subtype FALSE canonical NA NA 91 None 51 7 0 FALSE 0 0 NA C coding 128 384 89 472 PB.3764.1 chr6 - 2723 1 genic_intron novelGene_152 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10798.2 chr22 - 1467 3 full-splice_match SNU13 ENST00000215956.9 1630 3 176 -13 no_subtype FALSE canonical NA NA 91 None 9 8 0 FALSE 0 0 NA C coding 128 384 89 472 PB.8600.5 chr16 + 4145 26 novel_not_in_catalog ADCY7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3431 None 2 12 1 TRUE 0 0 NA C coding 1080 3240 336 3575 PB.8600.4 chr16 + 6186 26 novel_in_catalog ADCY7 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 3415 None 6 31 0 FALSE 0 0 NA C coding 1080 3240 320 3559 PB.1640.1 chr2 - 3237 7 novel_not_in_catalog RBM43 novel NA NA NA NA no_subtype FALSE canonical NA NA 169 None 2 14 2 TRUE 0 0 NA A coding 264 792 431 1222 PB.8600.6 chr16 + 5621 25 full-splice_match ADCY7 ENST00000254235.7 6138 25 -1 518 no_subtype FALSE canonical NA NA 3365 None 10 19 0 FALSE 0 0 NA C coding 1080 3240 270 3509 PB.8600.1 chr16 + 5624 25 full-splice_match ADCY7 ENST00000254235.7 6138 25 -4 518 no_subtype FALSE canonical NA NA 3368 None 2 21 0 FALSE 0 0 NA C coding 1080 3240 273 3512 PB.7592.4 chr14 - 6070 45 novel_not_in_catalog TEP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 15 None 3 4 1 TRUE 0 0 NA B coding 1888 5664 38 5701 PB.8600.3 chr16 + 6208 26 novel_not_in_catalog ADCY7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3443 None 4 28 1 FALSE 0 0 NA C coding 1080 3240 348 3587 PB.8600.2 chr16 + 6789 26 novel_in_catalog ADCY7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3454 None 30 38 0 FALSE 0 0 NA C coding 1080 3240 359 3598 PB.1039.1 chr1 + 4224 16 novel_not_in_catalog DTL novel NA NA NA NA no_subtype FALSE canonical NA NA 2387 None 4 12 1 TRUE 0 0 NA B coding 730 2190 140 2329 PB.1039.2 chr1 + 2784 16 novel_not_in_catalog DTL novel NA NA NA NA no_subtype FALSE canonical NA NA 2343 None 4 5 1 TRUE 0 0 NA B coding 730 2190 121 2310 PB.1039.3 chr1 + 2957 4 novel_not_in_catalog DTL novel NA NA NA NA no_subtype FALSE canonical NA NA 1125 None 2 12 1 TRUE 0 0 NA B coding 232 696 372 1067 PB.287.2 chr1 + 1260 11 novel_not_in_catalog PPIE novel NA NA NA NA no_subtype FALSE canonical NA NA 848 None 2 3 2 TRUE 0 0 NA C coding 301 903 12 914 PB.287.1 chr1 + 1256 10 full-splice_match PPIE ENST00000324379.9 1277 10 9 12 no_subtype FALSE canonical NA NA 847 None 6 1 0 FALSE 0 0 NA C coding 301 903 11 913 PB.2114.1 chr3 - 3598 1 genic_intron novelGene_411 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 35 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4764.6 chr7 - 7415 24 novel_not_in_catalog KMT2C novel NA NA NA NA no_subtype TRUE canonical NA NA 53 None 2 8 0 TRUE 0 0 NA B coding 2464 7392 23 7414 PB.1808.1 chr2 + 600 1 full-splice_match RPL12P16 ENST00000431098.1 498 1 -65 -37 no_subtype FALSE canonical NA NA NA None 5 0 0 FALSE 0 0 NA A coding 165 495 66 560 PB.7582.1 chr13 - 1377 10 novel_not_in_catalog GRTP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 108 None 3 6 2 TRUE 0 0 NA A coding 336 1008 77 1084 PB.2823.2 chr4 + 1804 1 novel_in_catalog SLC30A9 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6555.4 chr11 - 2981 11 incomplete-splice_match RSF1 ENST00000308488.10 11550 16 302 8267 internal_fragment FALSE canonical NA NA 188 None 3 0 0 FALSE 0 0 NA B coding 993 2979 2 2980 PB.6023.1 chr10 + 3457 12 full-splice_match PDCD4 ENST00000280154.11 3602 12 143 2 no_subtype FALSE canonical NA NA 1480 None 63 14 0 FALSE 0 0 NA C coding 469 1407 132 1538 PB.3587.16 chr5 - 5665 4 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2624 None 5 34 3 TRUE 0 0 NA B coding 214 642 4853 5494 PB.6842.6 chr12 + 4037 15 full-splice_match ATF7IP ENST00000544627.5 4847 15 293 517 no_subtype FALSE canonical NA NA 3444 None 3 1 0 FALSE 0 0 NA C coding 1278 3834 28 3861 PB.6842.5 chr12 + 3003 1 genic_intron novelGene_114 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 30 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6842.4 chr12 + 3812 13 full-splice_match ATF7IP ENST00000543189.5 4887 13 -5 1080 no_subtype FALSE canonical NA NA 3241 None 3 2 0 FALSE 0 0 NA C coding 1105 3315 148 3462 PB.6842.2 chr12 + 1403 1 novel_in_catalog ATF7IP novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6842.1 chr12 + 4123 15 full-splice_match ATF7IP ENST00000536444.5 8774 15 -46 4697 no_subtype FALSE canonical NA NA 3542 None 15 1 0 FALSE 0 0 NA C coding 1269 3807 153 3959 PB.2300.1 chr3 - 1990 1 incomplete-splice_match FOXP1 ENST00000475937.5 4967 20 2944 34 no_subtype FALSE canonical NA NA NA None 28 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10107.2 chr19 + 1325 6 full-splice_match FCGRT ENST00000426395.7 1559 6 231 3 no_subtype FALSE canonical NA NA 1004 None 41 0 0 FALSE 0 0 NA C coding 365 1095 17 1111 PB.2730.1 chr4 + 3216 8 full-splice_match WFS1 ENST00000503569.5 3255 8 37 2 no_subtype FALSE canonical NA NA 991 None 45 3 0 FALSE 0 0 NA A coding 890 2670 131 2800 PB.9877.1 chr19 + 931 7 full-splice_match IFI30 ENST00000407280.3 1134 7 147 56 no_subtype FALSE canonical NA NA 718 None 58 2 0 FALSE 0 0 NA A coding 250 750 29 778 PB.592.1 chr1 - 2903 19 full-splice_match CSDE1 ENST00000339438.10 4006 19 2 1101 no_subtype FALSE canonical NA NA 57 None 666 1 0 FALSE 0 0 NA C coding 767 2301 445 2745 PB.10990.2 chrX - 5494 21 novel_in_catalog PHF8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 166 None 2 19 1 FALSE 0 0 NA C coding 923 2769 259 3027 PB.297.1 chr1 + 1405 10 novel_not_in_catalog NFYC novel NA NA NA NA no_subtype FALSE canonical NA NA 1010 None 16 4 0 FALSE 0 0 NA B coding 335 1005 123 1127 PB.297.2 chr1 + 1806 10 novel_not_in_catalog NFYC novel NA NA NA NA no_subtype FALSE canonical NA NA 1088 None 2 2 0 FALSE 0 0 NA B coding 439 1317 201 1517 PB.297.3 chr1 + 1876 13 novel_not_in_catalog NFYC novel NA NA NA NA no_subtype FALSE canonical NA NA 990 None 4 5 0 TRUE 0 0 NA B coding 335 1005 100 1104 PB.3599.2 chr5 + 2783 2 genic RN7SL655P novel NA NA NA NA no_subtype FALSE non_canonical NA NA 556 None 4 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1025.2 chr1 - 3018 5 novel_in_catalog LAMB3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 125 None 3 6 0 FALSE 0 0 NA C coding 104 312 352 663 PB.1025.1 chr1 - 4007 23 full-splice_match LAMB3 ENST00000356082.8 4055 23 -27 75 no_subtype FALSE canonical NA NA 125 None 101 3 0 FALSE 0 0 NA C coding 1172 3516 163 3678 PB.7529.1 chr13 - 4132 11 novel_not_in_catalog TBC1D4 novel NA NA NA NA no_subtype FALSE canonical NA NA 345 None 6 13 0 TRUE 0 0 NA B coding 515 1545 473 2017 PB.1885.2 chr2 + 3145 17 novel_not_in_catalog ACSL3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2426 None 3 12 1 TRUE 0 0 NA C coding 709 2127 455 2581 PB.9552.2 chr18 + 2718 11 novel_not_in_catalog SLC14A1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1156 None 4 14 0 TRUE 0 0 NA B coding 389 1167 161 1327 PB.6903.1 chr12 - 2940 20 full-splice_match CPNE8 ENST00000331366.9 3489 20 40 509 no_subtype FALSE canonical NA NA 155 None 10 4 0 FALSE 0 0 NA A coding 564 1692 58 1749 PB.11144.3 chrX + 4156 33 full-splice_match STAG2 ENST00000371157.7 5991 33 60 1775 no_subtype FALSE canonical NA NA 3848 None 22 1 0 FALSE 0 0 NA C coding 1231 3693 177 3869 PB.9781.1 chr19 - 1500 8 full-splice_match ECSIT ENST00000270517.11 1700 8 31 169 no_subtype FALSE canonical NA NA 82 None 40 2 0 FALSE 0 0 NA A coding 431 1293 106 1398 PB.414.1 chr1 - 1740 1 genic_intron novelGene_614 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4800.2 chr8 - 1961 10 full-splice_match CTSB ENST00000353047.10 3875 10 111 1803 no_subtype FALSE canonical NA NA 118 None 469 17 0 FALSE 0 0 NA C coding 339 1017 144 1160 PB.4800.1 chr8 - 3073 11 novel_not_in_catalog CTSB novel NA NA NA NA no_subtype TRUE non_canonical NA NA 66 None 342 26 1 TRUE 0 0 NA C coding 339 1017 92 1108 PB.3600.1 chr5 - 2784 2 antisense novelGene_RN7SL655P_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2243 None 14 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2529.1 chr3 + 2788 1 novel_in_catalog TSC22D2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 7 0 FALSE 0 0 NA B coding 692 2076 392 2467 PB.7183.1 chr12 - 2885 3 full-splice_match IKBIP ENST00000299157.4 3189 3 297 7 no_subtype FALSE canonical NA NA 256 None 4 20 0 FALSE 0 0 NA A coding 377 1131 78 1208 PB.5920.1 chr10 + 3457 22 full-splice_match KIF11 ENST00000260731.4 4860 22 -137 1540 no_subtype TRUE canonical NA NA 3266 None 4 1 0 FALSE 0 0 NA A coding 1056 3168 228 3395 PB.978.1 chr1 - 2941 3 full-splice_match FMOD ENST00000354955.4 3310 3 365 4 no_subtype FALSE canonical NA NA 92 None 31 6 0 FALSE 0 0 NA A coding 376 1128 100 1227 PB.1223.6 chr2 + 1780 1 incomplete-splice_match RAB10 ENST00000264710.4 3535 6 1710 46 no_subtype FALSE canonical NA NA NA None 3 2 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7529.3 chr13 - 3585 11 novel_in_catalog TBC1D4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 893 None 2 7 0 FALSE 0 0 NA B coding 737 2211 396 2606 PB.10211.1 chr19 - 890 6 full-splice_match CHMP2A ENST00000312547.6 913 6 19 4 no_subtype FALSE canonical NA NA 118 None 3 2 0 FALSE 0 0 NA A coding 222 666 143 808 PB.4788.1 chr8 + 2086 7 full-splice_match ERI1 ENST00000250263.7 4615 7 93 2436 no_subtype TRUE canonical NA NA 974 None 5 3 0 FALSE 0 0 NA A coding 349 1047 168 1214 PB.7717.1 chr14 - 2919 6 full-splice_match GCH1 ENST00000622544.4 2923 6 3 1 no_subtype FALSE canonical NA NA 501 None 3 12 0 FALSE 0 0 NA A coding 250 750 159 908 PB.1592.1 chr2 + 4085 1 genic_intron novelGene_1145 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1615.5 chr2 + 1404 1 genic_intron novelGene_1206 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5598.4 chr9 - 3396 19 novel_not_in_catalog RALGDS novel NA NA NA NA no_subtype FALSE canonical NA NA 210 None 2 16 0 TRUE 0 0 NA B coding 856 2568 79 2646 PB.6051.2 chr10 + 2692 3 novel_not_in_catalog GRK5 novel NA NA NA NA no_subtype FALSE canonical NA NA 804 None 2 8 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.6051.1 chr10 + 2518 16 full-splice_match GRK5 ENST00000392870.2 2654 16 131 5 no_subtype FALSE canonical NA NA 1872 None 2 7 0 FALSE 0 0 NA C coding 590 1770 199 1968 PB.5004.1 chr8 + 1702 1 incomplete-splice_match CPNE3 ENST00000614678.1 4201 7 2462 38 no_subtype FALSE canonical NA NA NA None 9 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4090.1 chr6 + 1967 2 antisense novelGene_FYN_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 59 None 2 8 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.3282.1 chr5 - 1821 2 genic_intron novelGene_583 novel NA NA NA NA no_subtype FALSE canonical NA NA 698 None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5921.3 chr10 + 1539 4 novel_not_in_catalog HHEX novel NA NA NA NA no_subtype FALSE canonical NA NA 444 None 7 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3639.5 chr5 - 3604 3 novel_not_in_catalog LCP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 233 None 2 19 1 TRUE 0 0 NA B coding 51 153 156 308 PB.10392.1 chr20 - 1585 4 full-splice_match OSER1 ENST00000255174.2 1572 4 -20 7 no_subtype FALSE canonical NA NA 116 None 37 3 0 FALSE 0 0 NA A coding 292 876 158 1033 PB.3639.1 chr5 - 2380 22 novel_not_in_catalog LCP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 246 None 23 4 0 TRUE 0 0 NA B coding 533 1599 169 1767 PB.3639.2 chr5 - 1616 8 novel_not_in_catalog LCP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 260 None 6 3 0 TRUE 0 0 NA B coding 214 642 183 824 PB.3639.3 chr5 - 2946 4 novel_not_in_catalog LCP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 254 None 26 13 1 TRUE 0 0 NA B coding 63 189 177 365 PB.10123.1 chr19 - 2583 10 full-splice_match SIGLEC11 ENST00000426971.2 2479 10 -112 8 no_subtype FALSE canonical NA NA 188 None 47 3 1 FALSE 0 0 NA C coding 626 1878 41 1918 PB.10123.3 chr19 - 2567 12 novel_not_in_catalog SIGLEC11 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 22 1 TRUE 0 0 NA C coding 467 1401 2 1402 PB.1159.1 chr1 - 1763 8 full-splice_match TFB2M ENST00000366514.4 1848 8 73 12 no_subtype FALSE canonical NA NA 426 None 9 2 0 FALSE 0 0 NA A coding 396 1188 114 1301 PB.10123.5 chr19 - 3029 11 novel_not_in_catalog SIGLEC11 novel NA NA NA NA no_subtype FALSE canonical NA NA 83 None 2 12 1 TRUE 0 0 NA C coding 470 1410 8 1417 PB.840.3 chr1 - 2430 1 genic_intron novelGene_1290 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2238.2 chr3 + 3155 14 novel_not_in_catalog NISCH novel NA NA NA NA no_subtype FALSE canonical NA NA 1430 None 2 2 0 TRUE 0 0 NA B coding 583 1749 15 1763 PB.9488.1 chr18 + 2906 1 full-splice_match CHMP1B ENST00000526991.2 3054 1 50 98 no_subtype FALSE canonical NA NA NA None 91 16 0 FALSE 0 0 NA A coding 196 588 76 663 PB.4219.1 chr6 + 3620 18 full-splice_match SNX9 ENST00000392185.7 4198 18 29 549 no_subtype FALSE canonical NA NA 1882 None 6 12 0 FALSE 0 0 NA C coding 595 1785 143 1927 PB.2238.1 chr3 + 2576 15 novel_not_in_catalog NISCH novel NA NA NA NA no_subtype TRUE canonical NA NA 1546 None 19 0 0 TRUE 0 0 NA B coding 515 1545 19 1563 PB.2238.4 chr3 + 5507 8 novel_in_catalog NISCH novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4311 None 2 20 0 FALSE 0 0 NA B coding 993 2979 1941 4919 PB.6037.2 chr10 - 3246 20 novel_not_in_catalog AFAP1L2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 63 None 2 6 1 TRUE 0 0 NA B coding 818 2454 48 2501 PB.5082.2 chr8 - 3082 25 full-splice_match ENPP2 ENST00000075322.10 2651 25 0 -431 no_subtype FALSE canonical NA NA 92 None 124 0 0 FALSE 0 0 NA C coding 863 2589 60 2648 PB.5082.3 chr8 - 3119 25 novel_in_catalog ENPP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 125 None 5 0 0 FALSE 0 0 NA C coding 859 2577 105 2681 PB.3121.2 chr4 - 1900 14 novel_in_catalog DDX60L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 101 None 9 2 0 FALSE 0 0 NA B coding 563 1689 212 1900 PB.5082.1 chr8 - 3071 25 novel_in_catalog ENPP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 92 None 39 0 0 FALSE 0 0 NA C coding 859 2577 60 2636 PB.3121.4 chr4 - 2043 15 novel_not_in_catalog DDX60L novel NA NA NA NA no_subtype FALSE canonical NA NA 124 None 2 7 2 FALSE 0 0 NA B coding 563 1689 355 2043 PB.4780.1 chr8 + 3698 8 novel_not_in_catalog MCPH1 novel NA NA NA NA no_subtype FALSE canonical NA NA 692 None 2 20 1 FALSE 0 0 NA A coding 500 1500 353 1852 PB.5082.4 chr8 - 3158 26 full-splice_match ENPP2 ENST00000522826.5 2667 26 -59 -432 no_subtype FALSE canonical NA NA 92 None 11 2 1 FALSE 0 0 NA C coding 888 2664 60 2723 PB.1916.1 chr2 - 2578 14 full-splice_match NCL ENST00000322723.8 4034 14 76 1380 no_subtype FALSE canonical NA NA 183 None 292 4 0 FALSE 0 0 NA A coding 710 2130 166 2295 PB.3490.1 chr5 + 1388 4 full-splice_match CAMLG ENST00000297156.3 2221 4 47 786 no_subtype FALSE canonical NA NA 772 None 31 2 0 FALSE 0 0 NA C coding 296 888 74 961 PB.4876.1 chr8 + 825 4 novel_not_in_catalog EIF4EBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 442 None 2 1 1 TRUE 0 0 NA A coding 118 354 71 424 PB.3490.3 chr5 + 1612 3 novel_in_catalog CAMLG novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 997 None 2 5 0 FALSE 0 0 NA C coding 134 402 785 1186 PB.3490.2 chr5 + 1356 3 novel_in_catalog CAMLG novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 741 None 2 2 0 FALSE 0 0 NA C coding 274 822 109 930 PB.5584.1 chr9 + 2809 6 novel_not_in_catalog RP11-40A7.2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 968 None 4 20 1 TRUE 0 0 NA A coding 226 678 438 1115 PB.2654.14 chr3 + 3201 11 novel_not_in_catalog EIF4A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1110 None 2 23 2 TRUE 0 0 NA C coding 314 942 34 975 PB.1169.1 chr2 - 1739 10 full-splice_match SH3YL1 ENST00000356150.9 1763 10 23 1 no_subtype FALSE canonical NA NA 59 None 4 5 0 FALSE 0 0 NA A coding 342 1026 59 1084 PB.9713.3 chr19 - 2140 17 novel_in_catalog GPR108 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 105 None 2 4 0 FALSE 0 0 NA C coding 301 903 980 1882 PB.9713.1 chr19 - 1919 18 full-splice_match GPR108 ENST00000264080.11 2057 18 -6 144 no_subtype FALSE canonical NA NA 153 None 60 2 0 FALSE 0 0 NA C coding 543 1629 34 1662 PB.2974.2 chr4 - 1681 8 full-splice_match DNAJB14 ENST00000442697.6 6075 8 117 4277 no_subtype TRUE canonical NA NA 171 None 22 1 0 FALSE 0 0 NA C coding 379 1137 39 1175 PB.5469.1 chr9 - 5895 23 novel_not_in_catalog TNC novel NA NA NA NA no_subtype FALSE canonical NA NA 172 None 6 20 0 TRUE 0 0 NA B coding 1655 4965 309 5273 PB.3141.1 chr4 - 1455 8 full-splice_match ENPP6 ENST00000296741.6 3936 8 28 2453 no_subtype FALSE canonical NA NA 355 None 8 0 0 FALSE 0 0 NA A coding 440 1320 115 1434 PB.4764.3 chr7 - 3513 7 incomplete-splice_match KMT2C ENST00000473186.5 12854 46 4993 4348 internal_fragment FALSE canonical NA NA 160 None 5 4 0 FALSE 0 0 NA B coding 1126 3378 135 3512 PB.8770.1 chr16 + 2638 2 genic CDH13 novel NA NA NA NA no_subtype FALSE canonical NA NA 2337 None 3 12 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.6082.2 chr10 + 1780 6 novel_not_in_catalog BCCIP novel NA NA NA NA no_subtype FALSE canonical NA NA 1351 None 2 11 0 TRUE 0 0 NA C coding 200 600 16 615 PB.3470.3 chr5 - 2086 10 full-splice_match SEPT8 ENST00000296873.11 4394 10 165 2143 no_subtype FALSE canonical NA NA 149 None 27 1 0 FALSE 0 0 NA C coding 429 1287 120 1406 PB.7823.3 chr14 + 1128 1 incomplete-splice_match FOS ENST00000303562.8 2158 4 1028 3 no_subtype FALSE canonical NA NA NA None 17 1 0 FALSE 0 0 NA C coding 89 267 55 321 PB.3470.1 chr5 - 1794 11 novel_not_in_catalog SEPT8 novel NA NA NA NA no_subtype FALSE canonical NA NA 132 None 2 0 0 FALSE 0 0 NA C coding 483 1449 103 1551 PB.8892.2 chr17 + 1334 7 novel_in_catalog ELP5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 976 None 2 4 0 FALSE 0 0 NA C coding 207 621 468 1088 PB.8161.10 chr15 - 5564 3 genic RP11-16E23.3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 223 None 2 53 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.8892.1 chr17 + 1173 8 full-splice_match ELP5 ENST00000396628.6 1423 8 238 12 no_subtype FALSE canonical NA NA 815 None 4 2 0 FALSE 0 0 NA C coding 300 900 28 927 PB.8680.1 chr16 - 2889 3 novel_not_in_catalog RANBP10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 107 None 3 11 2 TRUE 0 0 NA A non_coding NA NA NA NA PB.6122.1 chr11 + 1291 8 full-splice_match TSPAN4 ENST00000397411.6 1025 8 23 -289 no_subtype FALSE canonical NA NA 746 None 4 2 0 FALSE 0 0 NA C coding 238 714 99 812 PB.6122.2 chr11 + 1391 9 full-splice_match TSPAN4 ENST00000397397.6 1423 9 27 5 no_subtype FALSE canonical NA NA 846 None 7 3 0 FALSE 0 0 NA C coding 238 714 199 912 PB.6122.3 chr11 + 1352 9 full-splice_match TSPAN4 ENST00000397406.5 1426 9 64 10 no_subtype FALSE canonical NA NA 807 None 19 3 0 FALSE 0 0 NA C coding 238 714 160 873 PB.7002.1 chr12 - 2181 12 full-splice_match ATF7 ENST00000456903.8 5218 12 -4 3041 no_subtype FALSE canonical NA NA 54 None 5 5 0 FALSE 0 0 NA C coding 483 1449 76 1524 PB.7002.2 chr12 - 2209 12 full-splice_match ATF7 ENST00000420353.6 6680 12 46 4425 no_subtype FALSE canonical NA NA 83 None 3 5 0 FALSE 0 0 NA C coding 483 1449 105 1553 PB.9694.1 chr19 + 2884 2 genic_intron novelGene_36 novel NA NA NA NA no_subtype FALSE canonical NA NA 2577 None 5 25 0 FALSE 0 0 NA A coding 177 531 841 1371 PB.6082.6 chr10 + 6229 3 genic_intron novelGene_1092 novel NA NA NA NA no_subtype TRUE canonical NA NA 2284 None 3 38 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3162.3 chr5 - 2751 18 novel_not_in_catalog BRD9 novel NA NA NA NA no_subtype FALSE canonical NA NA 194 None 2 6 2 TRUE 0 0 NA B coding 412 1236 938 2173 PB.3162.2 chr5 - 2511 18 novel_not_in_catalog BRD9 novel NA NA NA NA no_subtype FALSE canonical NA NA 194 None 8 9 2 TRUE 0 0 NA B coding 597 1791 143 1933 PB.3162.1 chr5 - 2509 18 novel_not_in_catalog BRD9 novel NA NA NA NA no_subtype TRUE canonical NA NA 184 None 2 7 2 TRUE 0 0 NA B coding 599 1797 133 1929 PB.1702.1 chr2 - 2982 1 genic_intron novelGene_1325 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3587.2 chr5 - 2724 18 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 177 None 2 6 1 TRUE 0 0 NA B coding 564 1692 201 1892 PB.2022.1 chr3 + 1543 1 genic_intron novelGene_123 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2596.2 chr3 + 1729 1 antisense novelGene_TBL1XR1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7447.1 chr13 - 3056 3 genic_intron novelGene_406 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2809 None 2 24 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2408.1 chr3 - 3685 12 novel_not_in_catalog FSTL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 97 None 169 22 1 TRUE 0 0 NA A coding 308 924 98 1021 PB.1200.6 chr2 - 3147 1 genic_intron novelGene_149 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 8 0 FALSE 0 0 NA A coding 119 357 1312 1668 PB.3149.2 chr4 + 2944 5 novel_not_in_catalog SLC25A4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1323 None 2 14 0 TRUE 0 0 NA C coding 298 894 108 1001 PB.3149.1 chr4 + 1292 4 full-splice_match SLC25A4 ENST00000281456.10 4440 4 34 3114 no_subtype FALSE canonical NA NA 837 None 13 4 0 FALSE 0 0 NA C coding 298 894 99 992 PB.2127.3 chr3 + 2929 6 novel_in_catalog SNRK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1184 None 2 14 0 FALSE 0 0 NA C coding 360 1080 241 1320 PB.4205.2 chr6 - 2194 5 full-splice_match FBXO5 ENST00000367241.3 2221 5 12 15 no_subtype FALSE canonical NA NA 334 None 2 10 0 FALSE 0 0 NA C coding 401 1203 370 1572 PB.678.4 chr1 - 3352 12 full-splice_match PI4KB ENST00000368873.5 3340 12 -16 4 no_subtype FALSE canonical NA NA 157 None 4 6 2 FALSE 0 0 NA C coding 816 2448 186 2633 PB.4330.1 chr7 - 1562 8 full-splice_match TRA2A ENST00000297071.8 1845 8 52 231 no_subtype FALSE canonical NA NA 201 None 19 9 0 FALSE 0 0 NA C coding 282 846 166 1011 PB.2833.3 chr4 + 3053 6 novel_not_in_catalog NIPAL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 687 None 2 13 0 FALSE 0 0 NA C coding 227 681 615 1295 PB.4330.3 chr7 - 1667 9 novel_not_in_catalog TRA2A novel NA NA NA NA no_subtype FALSE canonical NA NA 213 None 2 11 0 TRUE 0 0 NA C coding 239 717 178 894 PB.4330.2 chr7 - 1782 10 novel_not_in_catalog TRA2A novel NA NA NA NA no_subtype TRUE canonical NA NA 196 None 9 12 0 TRUE 0 0 NA C coding 282 846 161 1006 PB.4330.5 chr7 - 1517 1 genic_intron novelGene_220 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8492.4 chr16 + 3639 22 novel_not_in_catalog POLR3E novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3080 None 2 12 0 TRUE 0 0 NA B coding 708 2124 1011 3134 PB.4330.7 chr7 - 2757 3 novel_not_in_catalog TRA2A novel NA NA NA NA no_subtype FALSE canonical NA NA 185 None 4 23 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.4330.6 chr7 - 1750 1 genic_intron novelGene_221 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4330.8 chr7 - 3281 2 novel_not_in_catalog TRA2A novel NA NA NA NA no_subtype FALSE canonical NA NA 1373 None 17 23 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.10010.1 chr19 - 2179 7 full-splice_match TGFB1 ENST00000221930.5 2769 7 -13 603 no_subtype FALSE canonical NA NA 1235 None 17 2 0 FALSE 0 0 NA A coding 390 1170 881 2050 PB.1287.5 chr2 - 1203 3 incomplete-splice_match SRSF7 ENST00000443213.5 1903 7 -7 707 internal_fragment FALSE canonical NA NA 131 None 8 0 0 FALSE 0 0 NA C coding 132 396 104 499 PB.1287.4 chr2 - 1929 7 full-splice_match SRSF7 ENST00000443213.5 1903 7 -8 -18 no_subtype FALSE canonical NA NA 132 None 4 9 0 FALSE 0 0 NA C coding 132 396 105 500 PB.4265.4 chr7 - 6173 43 incomplete-splice_match INTS1 ENST00000404767.7 6959 48 783 3 5prime_fragment FALSE canonical NA NA 147 None 3 4 0 FALSE 0 0 NA C coding 1930 5790 84 5873 PB.4265.5 chr7 - 3567 23 novel_not_in_catalog INTS1 novel NA NA NA NA no_subtype TRUE canonical NA NA 48 None 2 3 0 TRUE 0 0 NA C coding 1006 3018 90 3107 PB.1287.1 chr2 - 2759 8 novel_in_catalog SRSF7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 133 None 2 22 0 FALSE 0 0 NA C coding 137 411 106 516 PB.4265.3 chr7 - 6967 48 full-splice_match INTS1 ENST00000404767.7 6959 48 -11 3 no_subtype FALSE canonical NA NA 56 None 26 4 0 FALSE 0 0 NA C coding 2190 6570 98 6667 PB.1287.3 chr2 - 1052 8 full-splice_match SRSF7 ENST00000313117.10 2489 8 135 1302 no_subtype FALSE canonical NA NA 131 None 18 3 0 FALSE 0 0 NA C coding 238 714 104 817 PB.1287.2 chr2 - 1502 9 full-splice_match SRSF7 ENST00000425778.5 2857 9 56 1299 no_subtype FALSE canonical NA NA 131 None 11 2 0 FALSE 0 0 NA C coding 137 411 104 514 PB.6734.1 chr11 + 2910 3 genic_intron novelGene_1110 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2706 None 2 16 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.6662.3 chr11 - 1518 1 novel_in_catalog JAML novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9296.1 chr17 + 1362 13 novel_in_catalog PSMC5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1259 None 26 0 0 FALSE 0 0 NA A coding 406 1218 93 1310 PB.6754.10 chr12 + 2977 1 novel_in_catalog WNK1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA B coding 102 306 12 317 PB.6047.4 chr10 - 3405 10 novel_not_in_catalog CACUL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 600 None 4 19 1 TRUE 0 0 NA C coding 369 1107 234 1340 PB.609.2 chr1 - 2910 12 novel_in_catalog GDAP2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 162 None 2 7 0 FALSE 0 0 NA C coding 416 1248 230 1477 PB.6047.3 chr10 - 5984 11 novel_not_in_catalog CACUL1 novel NA NA NA NA no_subtype TRUE canonical NA NA 640 None 6 36 1 TRUE 0 0 NA C coding 369 1107 274 1380 PB.10566.1 chr21 - 3905 20 novel_not_in_catalog BRWD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 150 None 2 1 0 TRUE 0 0 NA B coding 1247 3741 163 3903 PB.1016.2 chr1 + 3800 20 full-splice_match CR2 ENST00000367057.7 4240 20 102 338 no_subtype FALSE canonical NA NA 3384 None 83 10 1 FALSE 0 0 NA C coding 1092 3276 88 3363 PB.10566.3 chr21 - 2795 24 novel_not_in_catalog BRWD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 126 None 9 1 0 TRUE 0 0 NA B coding 906 2718 78 2795 PB.9454.3 chr17 - 3044 9 novel_not_in_catalog C17orf62 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 61 None 2 18 3 TRUE 0 0 NA B coding 176 528 1766 2293 PB.9106.2 chr17 + 3293 8 incomplete-splice_match MSL1 ENST00000398532.8 4707 9 1283 131 internal_fragment FALSE canonical NA NA 786 None 2 18 1 FALSE 0 0 NA A coding 184 552 323 874 PB.9454.1 chr17 - 1835 9 novel_not_in_catalog C17orf62 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 73 None 42 5 1 TRUE 0 0 NA B coding 187 561 112 672 PB.3699.2 chr5 + 2924 2 novel_not_in_catalog CNOT6 novel NA NA NA NA no_subtype FALSE canonical NA NA 2027 None 2 19 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.3699.1 chr5 + 2948 2 incomplete-splice_match CNOT6 ENST00000261951.8 6176 12 1695 1533 internal_fragment FALSE canonical NA NA 115 None 2 12 0 FALSE 0 0 NA B coding 81 243 83 325 PB.10913.1 chrX - 2101 5 full-splice_match DYNLT3 ENST00000378578.8 2217 5 112 4 no_subtype FALSE canonical NA NA 45 None 2 11 0 FALSE 0 0 NA A coding 116 348 16 363 PB.5545.3 chr9 + 7795 58 novel_not_in_catalog SPTAN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 7346 None 3 3 1 TRUE 0 0 NA B coding 1575 4725 113 4837 PB.3839.1 chr6 - 2195 7 full-splice_match AGPAT1 ENST00000375107.7 2234 7 36 3 no_subtype FALSE canonical NA NA 273 None 3 7 0 FALSE 0 0 NA A coding 283 849 283 1131 PB.7617.8 chr14 - 4314 18 full-splice_match ACIN1 ENST00000457657.5 4815 18 495 6 no_subtype FALSE canonical NA NA 145 None 6 4 0 FALSE 0 0 NA C coding 1243 3729 8 3736 PB.7617.9 chr14 - 2466 7 novel_not_in_catalog ACIN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1183 None 2 10 0 TRUE 0 0 NA C coding 152 456 1460 1915 PB.5746.1 chr10 - 2656 4 novel_in_catalog ZNF248 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 128 None 3 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3693.4 chr5 + 2075 15 full-splice_match CANX ENST00000247461.8 4260 15 110 2075 no_subtype FALSE canonical NA NA 1815 None 2 2 0 FALSE 0 0 NA C coding 592 1776 91 1866 PB.7617.2 chr14 - 1031 3 full-splice_match PSMB5 ENST00000361611.10 1294 3 252 11 no_subtype FALSE canonical NA NA 210 None 5 1 0 FALSE 0 0 NA A coding 263 789 13 801 PB.5345.9 chr9 - 2015 17 novel_not_in_catalog HNRNPK novel NA NA NA NA no_subtype FALSE canonical NA NA 77 None 5 3 0 FALSE 0 0 NA C coding 463 1389 185 1573 PB.7617.4 chr14 - 4447 19 full-splice_match ACIN1 ENST00000605057.5 4474 19 25 2 no_subtype FALSE canonical NA NA 154 None 5 5 0 FALSE 0 0 NA C coding 1283 3849 17 3865 PB.2491.2 chr3 + 2752 23 full-splice_match ARMC8 ENST00000481646.5 3043 23 279 12 no_subtype FALSE canonical NA NA 2073 None 13 3 0 FALSE 0 0 NA C coding 659 1977 128 2104 PB.7617.6 chr14 - 2520 13 full-splice_match ACIN1 ENST00000357481.6 2563 13 41 2 no_subtype FALSE canonical NA NA 150 None 2 3 0 FALSE 0 0 NA C coding 583 1749 190 1938 PB.7617.7 chr14 - 3257 10 novel_not_in_catalog ACIN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1181 None 2 12 1 FALSE 0 0 NA C coding 189 567 2109 2675 PB.2471.8 chr3 - 3619 3 genic RP11-517B11.7 novel NA NA NA NA no_subtype TRUE canonical NA NA 3074 None 2 27 2 FALSE 0 0 NA A coding 124 372 1507 1878 PB.2455.1 chr3 - 3297 6 novel_in_catalog GATA2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 221 None 2 23 0 FALSE 0 0 NA A coding 480 1440 267 1706 PB.2225.1 chr3 - 1565 15 full-splice_match RRP9 ENST00000232888.6 1578 15 5 8 no_subtype FALSE canonical NA NA 156 None 14 3 0 FALSE 0 0 NA A coding 475 1425 70 1494 PB.7483.1 chr13 + 4738 27 full-splice_match RB1 ENST00000267163.4 4840 27 -5 107 no_subtype FALSE canonical NA NA 2856 None 5 7 0 FALSE 0 0 NA A coding 928 2784 144 2927 PB.9267.1 chr17 - 2703 4 full-splice_match SKA2 ENST00000330137.11 2798 4 87 8 no_subtype FALSE canonical NA NA 52 None 7 10 0 FALSE 0 0 NA A coding 121 363 20 382 PB.7951.2 chr14 - 2610 14 novel_not_in_catalog AKT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 99 None 2 14 0 FALSE 0 0 NA A coding 480 1440 179 1618 PB.2471.5 chr3 - 1541 13 novel_not_in_catalog MRPL3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 123 None 3 6 0 TRUE 0 0 NA B coding 348 1044 32 1075 PB.10078.1 chr19 + 1931 9 novel_not_in_catalog SAE1 novel NA NA NA NA no_subtype FALSE canonical NA NA 906 None 2 5 0 FALSE 0 0 NA C coding 282 846 151 996 PB.10078.2 chr19 + 1991 9 full-splice_match SAE1 ENST00000270225.11 2049 9 56 2 no_subtype FALSE canonical NA NA 960 None 31 4 0 FALSE 0 0 NA C coding 346 1038 13 1050 PB.10078.3 chr19 + 1930 9 novel_not_in_catalog SAE1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 902 None 2 7 2 TRUE 0 0 NA C coding 296 888 13 900 PB.5285.3 chr9 + 1622 8 novel_in_catalog CREB3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 854 None 2 7 0 FALSE 0 0 NA C coding 444 1332 159 1490 PB.5285.2 chr9 + 1354 9 full-splice_match CREB3 ENST00000353704.2 1832 9 331 147 no_subtype FALSE canonical NA NA 888 None 28 2 0 FALSE 0 0 NA C coding 371 1113 108 1220 PB.5285.1 chr9 + 1623 9 novel_not_in_catalog CREB3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1003 None 2 4 0 FALSE 0 0 NA C coding 423 1269 223 1491 PB.6393.1 chr11 - 847 5 full-splice_match PLA2G16 ENST00000415826.1 1099 5 -52 304 no_subtype FALSE canonical NA NA 137 None 2 4 0 FALSE 0 0 NA A coding 162 486 192 677 PB.289.1 chr1 + 2122 14 full-splice_match MFSD2A ENST00000372811.9 2154 14 15 17 no_subtype FALSE canonical NA NA 1677 None 2 4 0 FALSE 0 0 NA C coding 530 1590 149 1738 PB.2671.1 chr3 - 2887 1 intergenic novelGene_1360 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.289.2 chr1 + 2052 14 novel_in_catalog MFSD2A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1671 None 2 2 0 FALSE 0 0 NA C coding 528 1584 149 1732 PB.3410.1 chr5 + 2569 8 full-splice_match SLC25A46 ENST00000355943.7 2385 8 64 -248 no_subtype FALSE canonical NA NA 740 None 19 17 1 FALSE 0 0 NA A coding 418 1254 63 1316 PB.7959.228 chr14 - 1536 10 fusion IGHV4-4,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 19 15 4 TRUE 0 0 NA B coding 196 588 817 1404 PB.5389.1 chr9 - 1336 9 novel_not_in_catalog CTSV novel NA NA NA NA no_subtype FALSE canonical NA NA 45 None 2 0 0 TRUE 0 0 NA A coding 334 1002 56 1057 PB.6186.1 chr11 + 1503 5 full-splice_match RPL27A ENST00000314138.10 4916 5 381 3032 no_subtype FALSE canonical NA NA 340 None 23 10 0 FALSE 0 0 NA A coding 148 444 23 466 PB.4921.1 chr8 + 2753 5 full-splice_match MRPL15 ENST00000260102.8 1147 5 71 -1677 no_subtype FALSE canonical NA NA 556 None 14 15 0 FALSE 0 0 NA A coding 296 888 4 891 PB.5754.1 chr10 - 3832 13 novel_not_in_catalog RASGEF1A novel NA NA NA NA no_subtype FALSE canonical NA NA 672 None 2 20 0 FALSE 0 0 NA A coding 481 1443 679 2121 PB.8314.1 chr15 - 2956 1 genic_intron novelGene_859 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7321.1 chr12 + 3439 10 full-splice_match HNF1A ENST00000257555.10 3442 10 0 3 no_subtype FALSE canonical NA NA 1994 None 8 9 0 FALSE 0 0 NA A coding 631 1893 227 2119 PB.5841.1 chr10 - 2731 16 novel_not_in_catalog P4HA1 novel NA NA NA NA no_subtype TRUE canonical NA NA 97 None 9 7 0 FALSE 0 0 NA C coding 534 1602 130 1731 PB.1576.1 chr2 - 3046 11 incomplete-splice_match MAP3K2 ENST00000344908.9 2135 16 544 -1455 5prime_fragment FALSE canonical NA NA 22 None 4 17 0 FALSE 0 0 NA A coding 423 1269 145 1413 PB.5841.3 chr10 - 2730 15 full-splice_match P4HA1 ENST00000394890.6 2844 15 112 2 no_subtype FALSE canonical NA NA 97 None 10 7 1 FALSE 0 0 NA C coding 534 1602 130 1731 PB.5841.2 chr10 - 2704 16 novel_not_in_catalog P4HA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 7 6 0 FALSE 0 0 NA C coding 534 1602 104 1705 PB.10445.1 chr20 + 3038 1 full-splice_match MOCS3 ENST00000244051.2 5106 1 -8 2076 no_subtype FALSE canonical NA NA NA None 7 17 0 FALSE 0 0 NA A coding 460 1380 26 1405 PB.9761.1 chr19 + 2863 16 novel_not_in_catalog PDE4A novel NA NA NA NA no_subtype TRUE canonical NA NA 1857 None 2 6 0 TRUE 0 0 NA B coding 860 2580 10 2589 PB.9761.2 chr19 - 1881 2 antisense novelGene_PDE4A_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 21 None 3 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2511.2 chr3 + 2675 25 novel_in_catalog U2SURP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2568 None 2 0 0 FALSE 0 0 NA B coding 882 2646 28 2673 PB.5299.1 chr9 + 1266 10 novel_not_in_catalog GRHPR novel NA NA NA NA no_subtype FALSE canonical NA NA 1125 None 5 2 0 TRUE 0 0 NA B coding 328 984 96 1079 PB.5299.2 chr9 + 5704 5 novel_not_in_catalog GRHPR novel NA NA NA NA no_subtype FALSE canonical NA NA 5567 None 2 41 1 TRUE 0 0 NA B coding 252 756 3628 4383 PB.602.1 chr1 + 1783 5 full-splice_match CD2 ENST00000369478.3 1609 5 82 -256 no_subtype FALSE canonical NA NA 762 None 65 1 0 FALSE 0 0 NA A coding 351 1053 27 1079 PB.3992.10 chr6 - 1599 8 novel_not_in_catalog EEF1A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 33 None 4 1 1 TRUE 0 0 NA C coding 416 1248 64 1311 PB.3992.11 chr6 - 1408 7 novel_not_in_catalog EEF1A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 32 None 3 1 1 TRUE 0 0 NA C coding 169 507 614 1120 PB.3992.12 chr6 - 2074 8 novel_in_catalog EEF1A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 370 None 4 3 0 FALSE 0 0 NA C coding 462 1386 401 1786 PB.3992.13 chr6 - 1614 8 novel_not_in_catalog EEF1A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 33 None 3 0 0 TRUE 0 0 NA C coding 421 1263 64 1326 PB.1866.1 chr2 + 1887 9 full-splice_match CYP27A1 ENST00000258415.8 2286 9 391 8 no_subtype FALSE canonical NA NA 1512 None 32 2 0 FALSE 0 0 NA A coding 531 1593 37 1629 PB.334.1 chr1 - 1552 13 novel_not_in_catalog EIF2B3 novel NA NA NA NA no_subtype FALSE canonical NA NA 82 None 11 0 0 TRUE 0 0 NA A coding 452 1356 92 1447 PB.943.2 chr1 - 3474 25 novel_not_in_catalog DENND1B novel NA NA NA NA no_subtype FALSE canonical NA NA 347 None 2 8 0 TRUE 0 0 NA B coding 574 1722 934 2655 PB.9966.1 chr19 + 6488 18 novel_not_in_catalog SIPA1L3 novel NA NA NA NA no_subtype TRUE canonical NA NA 4976 None 2 12 0 TRUE 0 0 NA A coding 1644 4932 381 5312 PB.10948.1 chrX + 1730 13 full-splice_match FTSJ1 ENST00000348411.2 1892 13 156 6 no_subtype FALSE canonical NA NA 1166 None 2 1 0 FALSE 0 0 NA A coding 329 987 168 1154 PB.9087.7 chr17 + 2327 1 incomplete-splice_match LASP1 ENST00000433206.6 4023 6 1693 4 no_subtype FALSE canonical NA NA NA None 12 11 0 FALSE 0 0 NA C coding 64 192 173 364 PB.9087.5 chr17 + 2482 2 genic_intron novelGene_389 novel NA NA NA NA no_subtype TRUE canonical NA NA 2399 None 3 13 0 FALSE 0 0 NA A coding 119 357 880 1236 PB.7633.1 chr14 - 2053 6 full-splice_match TINF2 ENST00000399423.8 2168 6 108 7 no_subtype TRUE canonical NA NA 415 None 6 5 0 FALSE 0 0 NA A coding 354 1062 224 1285 PB.9087.3 chr17 + 1529 3 genic_intron novelGene_386 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 624 None 3 7 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9087.1 chr17 + 3818 7 full-splice_match LASP1 ENST00000318008.10 4109 7 285 6 no_subtype FALSE canonical NA NA 658 None 164 15 0 FALSE 0 0 NA C coding 261 783 47 829 PB.3292.1 chr5 + 4095 12 novel_not_in_catalog PPWD1 novel NA NA NA NA no_subtype TRUE canonical NA NA 3975 None 2 23 1 TRUE 0 0 NA A coding 646 1938 10 1947 PB.9352.1 chr17 + 3391 10 full-splice_match TMEM104 ENST00000335464.9 4745 10 41 1313 no_subtype FALSE canonical NA NA 851 None 4 8 0 FALSE 0 0 NA A coding 496 1488 122 1609 PB.7876.1 chr14 + 6816 3 antisense novelGene_ITPK1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 6614 None 2 44 0 FALSE 0 0 NA A coding 143 429 1321 1749 PB.1778.2 chr2 + 1916 5 full-splice_match COQ10B ENST00000263960.6 2239 5 131 192 no_subtype FALSE canonical NA NA 556 None 7 12 0 FALSE 0 0 NA C coding 238 714 8 721 PB.4390.1 chr7 - 881 8 full-splice_match PSMA2 ENST00000223321.8 1487 8 49 557 no_subtype FALSE canonical NA NA 57 None 22 1 1 FALSE 0 0 NA A coding 234 702 17 718 PB.1778.1 chr2 + 1904 1 novel_in_catalog COQ10B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 10 0 FALSE 0 0 NA C coding 94 282 56 337 PB.990.1 chr1 - 1404 3 antisense novelGene_NFASC_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 371 None 11 6 0 FALSE 0 0 NA A coding 207 621 267 887 PB.811.1 chr1 + 3543 4 genic FCGR2B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3387 None 2 15 0 TRUE 0 0 NA A coding 78 234 62 295 PB.1357.1 chr2 - 2380 2 antisense novelGene_RP11-373L24.1_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 2233 None 2 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6273.2 chr11 + 3099 1 genic_intron novelGene_344 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A coding 102 306 693 998 PB.261.1 chr1 + 3423 5 novel_not_in_catalog THRAP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2604 None 2 20 1 TRUE 0 0 NA A coding 321 963 1170 2132 PB.8334.1 chr15 - 2071 7 full-splice_match SNRPA1 ENST00000558036.5 2108 7 36 1 no_subtype FALSE canonical NA NA 150 None 2 3 0 FALSE 0 0 NA C coding 175 525 69 593 PB.8934.3 chr17 - 2941 24 full-splice_match ELAC2 ENST00000338034.8 3148 24 199 8 no_subtype FALSE canonical NA NA 286 None 19 6 0 FALSE 0 0 NA C coding 811 2433 87 2519 PB.1718.2 chr2 - 2844 5 full-splice_match NFE2L2 ENST00000397063.8 2651 5 -295 102 no_subtype FALSE canonical NA NA 693 None 6 8 0 FALSE 0 0 NA C coding 589 1767 697 2463 PB.8334.2 chr15 - 2736 6 novel_in_catalog SNRPA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 150 None 2 8 0 FALSE 0 0 NA C coding 175 525 69 593 PB.2495.1 chr3 + 2770 9 novel_not_in_catalog MRPS22 novel NA NA NA NA no_subtype FALSE canonical NA NA 2479 None 3 12 1 TRUE 0 0 NA A coding 360 1080 27 1106 PB.5291.1 chr9 + 1033 8 novel_not_in_catalog CLTA novel NA NA NA NA no_subtype TRUE canonical NA NA 593 None 18 2 0 TRUE 0 0 NA B coding 218 654 95 748 PB.5291.2 chr9 + 1956 1 novel_in_catalog CLTA novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6038.5 chr10 - 3838 17 novel_in_catalog ABLIM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 165 None 16 16 1 FALSE 0 0 NA B coding 427 1281 220 1500 PB.11089.3 chrX + 2655 3 novel_not_in_catalog ARMCX5 novel NA NA NA NA no_subtype FALSE canonical NA NA 381 None 2 3 0 FALSE 0 0 NA B coding 558 1674 644 2317 PB.2298.1 chr3 + 2072 10 full-splice_match MITF ENST00000352241.8 4814 10 49 2693 no_subtype FALSE canonical NA NA 1275 None 2 1 0 FALSE 0 0 NA A coding 520 1560 115 1674 PB.11089.1 chrX + 2933 4 novel_in_catalog ARMCX5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 662 None 2 8 0 FALSE 0 0 NA B coding 558 1674 925 2598 PB.3000.2 chr4 + 1023 4 full-splice_match OSTC ENST00000361564.8 1077 4 48 6 no_subtype FALSE canonical NA NA 455 None 5 2 0 FALSE 0 0 NA A coding 149 447 25 471 PB.8934.1 chr17 - 3684 25 novel_not_in_catalog ELAC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 286 None 18 19 1 TRUE 0 0 NA C coding 811 2433 87 2519 PB.10685.3 chr22 - 3098 8 novel_not_in_catalog RHBDD3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 233 None 4 9 0 TRUE 0 0 NA B coding 389 1167 1745 2911 PB.8297.1 chr15 + 1631 8 novel_not_in_catalog BLM novel NA NA NA NA no_subtype TRUE canonical NA NA 1319 None 3 1 0 TRUE 0 0 NA B coding 510 1530 100 1629 PB.2038.6 chr3 - 2817 10 novel_not_in_catalog RFTN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 3 9 0 FALSE 0 0 NA B coding 578 1734 112 1845 PB.2038.7 chr3 - 2785 10 novel_not_in_catalog RFTN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 83 None 2 7 1 TRUE 0 0 NA B coding 302 906 910 1815 PB.2038.1 chr3 - 2781 11 novel_not_in_catalog RFTN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 26 None 3 6 1 TRUE 0 0 NA B coding 578 1734 65 1798 PB.10940.2 chrX + 3077 21 novel_in_catalog USP11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2545 None 3 5 0 FALSE 0 0 NA C coding 690 2070 611 2680 PB.2038.3 chr3 - 2849 10 novel_in_catalog RFTN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 137 None 7 6 0 FALSE 0 0 NA B coding 578 1734 146 1879 PB.142.1 chr1 + 2365 4 novel_not_in_catalog PNRC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1998 None 3 15 0 TRUE 0 0 NA C coding 139 417 403 819 PB.3060.1 chr4 - 2776 22 novel_not_in_catalog INPP4B novel NA NA NA NA no_subtype FALSE canonical NA NA 220 None 12 1 1 TRUE 0 0 NA A coding 739 2217 521 2737 PB.634.3 chr1 + 2882 22 novel_in_catalog CHD1L novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2553 None 4 3 0 FALSE 0 0 NA C coding 470 1410 1220 2629 PB.142.2 chr1 + 2363 3 full-splice_match PNRC2 ENST00000334351.7 2416 3 22 31 no_subtype FALSE canonical NA NA 371 None 2 15 0 FALSE 0 0 NA C coding 139 417 390 806 PB.5271.1 chr9 + 3606 1 novel_in_catalog GALT novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA C coding 179 537 2852 3388 PB.5486.1 chr9 - 4109 3 antisense novelGene_TLK1P1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 119 None 2 27 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.8995.1 chr17 + 1627 6 full-splice_match TMEM199 ENST00000292114.7 3148 6 81 1440 no_subtype FALSE canonical NA NA 540 None 10 5 0 FALSE 0 0 NA C coding 208 624 10 633 PB.8995.2 chr17 + 1519 5 novel_in_catalog TMEM199 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 440 None 2 6 0 FALSE 0 0 NA C coding 222 666 23 688 PB.8995.3 chr17 + 1436 6 novel_not_in_catalog TMEM199 novel NA NA NA NA no_subtype FALSE canonical NA NA 540 None 2 7 0 FALSE 0 0 NA C coding 200 600 10 609 PB.7427.1 chr13 - 1593 3 genic_intron novelGene_319 novel NA NA NA NA no_subtype FALSE canonical NA NA 423 None 3 13 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.3827.2 chr6 - 2575 21 full-splice_match SLC44A4 ENST00000229729.10 2589 21 3 11 no_subtype FALSE non_canonical NA NA 58 None 6 2 0 FALSE 0 0 NA A coding 710 2130 19 2148 PB.3531.1 chr5 - 1348 2 full-splice_match CD14 ENST00000302014.10 1886 2 526 12 no_subtype FALSE canonical NA NA 107 None 107 0 0 FALSE 0 0 NA A coding 375 1125 105 1229 PB.7475.10 chr13 - 2742 15 novel_not_in_catalog KIAA0226L novel NA NA NA NA no_subtype FALSE canonical NA NA 133 None 2 11 0 FALSE 0 0 NA B coding 647 1941 256 2196 PB.7475.11 chr13 - 1713 11 novel_not_in_catalog KIAA0226L novel NA NA NA NA no_subtype FALSE canonical NA NA 135 None 5 4 0 FALSE 0 0 NA B coding 275 825 471 1295 PB.7475.12 chr13 - 2506 9 novel_not_in_catalog KIAA0226L novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 5 6 0 FALSE 0 0 NA B coding 447 1341 226 1566 PB.7475.14 chr13 - 2516 9 novel_not_in_catalog KIAA0226L novel NA NA NA NA no_subtype FALSE canonical NA NA 111 None 2 4 0 FALSE 0 0 NA B coding 447 1341 234 1574 PB.5763.1 chr10 + 2508 14 full-splice_match ALOX5 ENST00000374391.6 2506 14 -5 3 no_subtype FALSE canonical NA NA 1903 None 18 0 0 FALSE 0 0 NA A coding 674 2022 59 2080 PB.10467.4 chr20 + 3038 15 novel_not_in_catalog NELFCD novel NA NA NA NA no_subtype FALSE canonical NA NA 2566 None 4 6 0 TRUE 0 0 NA B coding 500 1500 1099 2598 PB.10467.5 chr20 + 3270 4 full-splice_match TUBB1 ENST00000217133.1 3496 4 170 56 no_subtype FALSE canonical NA NA 376 None 10 6 0 FALSE 0 0 NA A coding 451 1353 100 1452 PB.613.3 chr1 - 5776 8 incomplete-splice_match NOTCH2 ENST00000256646.6 11389 34 5102 511 5prime_fragment FALSE canonical NA NA 120 None 5 15 0 FALSE 0 0 NA B coding 773 2319 213 2531 PB.9529.2 chr18 + 3095 21 novel_not_in_catalog DTNA novel NA NA NA NA no_subtype TRUE canonical NA NA 2327 None 4 1 0 TRUE 0 0 NA B coding 713 2139 327 2465 PB.10467.1 chr20 + 2216 16 novel_not_in_catalog NELFCD novel NA NA NA NA no_subtype FALSE canonical NA NA 1745 None 15 2 0 TRUE 0 0 NA B coding 590 1770 8 1777 PB.7608.40 chr14 + 1452 7 fusion TRAV26-1,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 903 None 2 6 1 TRUE 0 0 NA B coding 110 330 95 424 PB.9529.1 chr18 + 3483 4 novel_not_in_catalog DTNA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1716 None 2 17 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.2877.1 chr4 + 2973 1 incomplete-splice_match PARM1 ENST00000513238.5 4308 3 1331 5 no_subtype FALSE canonical NA NA NA None 5 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.848.1 chr1 + 1506 7 novel_not_in_catalog TIPRL novel NA NA NA NA no_subtype FALSE canonical NA NA 808 None 3 3 1 FALSE 0 0 NA A coding 235 705 133 837 PB.3390.3 chr5 + 3608 18 novel_in_catalog ERAP2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2732 None 3 9 0 FALSE 0 0 NA C coding 674 2022 169 2190 PB.6350.3 chr11 + 2760 7 novel_not_in_catalog MS4A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 956 None 7 10 2 FALSE 0 0 NA B coding 149 447 726 1172 PB.1064.1 chr1 - 2749 10 full-splice_match AIDA ENST00000340020.10 3008 10 86 173 no_subtype FALSE canonical NA NA 231 None 47 4 0 FALSE 0 0 NA A coding 306 918 122 1039 PB.8038.1 chr15 + 2759 2 antisense novelGene_LCMT2_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 264 None 4 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8622.1 chr16 + 1877 13 full-splice_match OGFOD1 ENST00000566157.5 4647 13 95 2675 no_subtype FALSE canonical NA NA 1495 None 4 3 0 FALSE 0 0 NA A coding 542 1626 29 1654 PB.6350.2 chr11 + 2600 7 novel_not_in_catalog MS4A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 795 None 3 12 2 TRUE 0 0 NA B coding 149 447 565 1011 PB.6506.20 chr11 - 5795 20 novel_not_in_catalog NUMA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 151 None 4 5 0 TRUE 0 0 NA B coding 1763 5289 189 5477 PB.3711.1 chr6 - 1627 7 full-splice_match SERPINB9 ENST00000380698.4 4118 7 -29 2520 no_subtype FALSE canonical NA NA 109 None 24 2 1 FALSE 0 0 NA A coding 376 1128 120 1247 PB.7160.1 chr12 + 4600 6 full-splice_match MRPL42 ENST00000549982.5 15582 6 34 10948 no_subtype FALSE canonical NA NA 510 None 40 38 0 FALSE 0 0 NA A coding 142 426 128 553 PB.1347.1 chr2 - 1674 14 full-splice_match FANCL ENST00000233741.8 1683 14 7 2 no_subtype FALSE canonical NA NA 126 None 2 4 0 FALSE 0 0 NA C coding 375 1125 31 1155 PB.1347.2 chr2 - 3148 1 novel_in_catalog FANCL novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10351.9 chr20 - 3570 3 full-splice_match RBM12 ENST00000374114.7 6662 3 -14 3106 no_subtype FALSE canonical NA NA 171 None 18 4 0 FALSE 0 0 NA C coding 932 2796 279 3074 PB.6959.3 chr12 + 2986 11 novel_not_in_catalog TMBIM6 novel NA NA NA NA no_subtype FALSE canonical NA NA 926 None 5 16 0 FALSE 0 0 NA C coding 237 711 237 947 PB.6350.7 chr11 - 2751 3 antisense novelGene_MS4A1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 212 None 3 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.11204.1 chrX + 2585 4 genic_intron novelGene_1256 novel NA NA NA NA no_subtype TRUE canonical NA NA 2468 None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8214.1 chr15 + 1579 1 full-splice_match RP11-817O13.8 ENST00000563278.1 1430 1 1227 -1376 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10351.2 chr20 - 1934 16 novel_in_catalog CPNE1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 133 None 23 2 0 FALSE 0 0 NA B coding 537 1611 134 1744 PB.10351.4 chr20 - 1969 17 novel_not_in_catalog CPNE1 novel NA NA NA NA no_subtype TRUE canonical NA NA 33 None 4 3 1 TRUE 0 0 NA B coding 582 1746 29 1774 PB.4743.1 chr7 + 3053 3 antisense novelGene_GIMAP6_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1771 None 3 10 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.10351.7 chr20 - 2786 3 novel_not_in_catalog CPNE1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 300 None 2 9 0 TRUE 0 0 NA B coding 119 357 1960 2316 PB.10735.8 chr22 + 748 1 incomplete-splice_match CSF2RB ENST00000262825.9 4087 15 3336 4 no_subtype FALSE canonical NA NA NA None 7 3 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10869.1 chrX - 814 1 full-splice_match GPX1P1 ENST00000388829.3 606 1 -13 -195 no_subtype FALSE canonical NA NA NA None 14 2 0 FALSE 0 0 NA A coding 103 309 182 490 PB.8103.1 chr15 - 1670 5 intergenic novelGene_546 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1349 None 8 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7276.1 chr12 + 3595 7 novel_in_catalog DTX1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2286 None 2 17 1 FALSE 0 0 NA A coding 285 855 1654 2508 PB.8103.2 chr15 - 1642 5 intergenic novelGene_546 novel NA NA NA NA no_subtype TRUE canonical NA NA 1347 None 2 10 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.3676.2 chr5 - 1701 13 full-splice_match PDLIM7 ENST00000355841.6 1689 13 -18 6 no_subtype FALSE canonical NA NA 74 None 25 12 1 FALSE 0 0 NA C coding 457 1371 86 1456 PB.3837.1 chr6 - 1372 2 full-splice_match FKBPL ENST00000375156.3 1345 2 -35 8 no_subtype FALSE canonical NA NA 232 None 3 1 0 FALSE 0 0 NA A coding 349 1047 307 1353 PB.9137.1 chr17 + 1815 2 genic_intron novelGene_420 novel NA NA NA NA no_subtype FALSE canonical NA NA 113 None 3 11 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3806.1 chr6 - 5491 2 antisense novelGene_NFKBIL1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 37 None 2 42 0 FALSE 0 0 NA A coding 141 423 4216 4638 PB.3390.1 chr5 + 3166 19 full-splice_match ERAP2 ENST00000437043.7 5705 19 561 1978 no_subtype FALSE canonical NA NA 2889 None 9 5 0 FALSE 0 0 NA C coding 954 2862 169 3030 PB.7355.1 chr12 + 1617 13 incomplete-splice_match DDX55 ENST00000238146.8 2654 14 8 1029 3prime_fragment FALSE canonical NA NA 1375 None 2 0 0 FALSE 0 0 NA A coding 525 1575 43 1617 PB.2697.2 chr3 + 2784 21 novel_not_in_catalog LRCH3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2736 None 2 6 1 TRUE 0 0 NA A coding 735 2205 15 2219 PB.4595.1 chr7 + 2657 10 novel_in_catalog HBP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1543 None 113 5 0 FALSE 0 0 NA C coding 514 1542 17 1558 PB.3958.1 chr6 - 2781 5 incomplete-splice_match TNFRSF21 ENST00000296861.2 3595 6 812 2 5prime_fragment FALSE canonical NA NA 330 None 2 5 0 FALSE 0 0 NA A coding 472 1416 132 1547 PB.1508.1 chr2 - 5522 2 genic_intron novelGene_907 novel NA NA NA NA no_subtype FALSE canonical NA NA 5231 None 2 43 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.43.2 chr1 + 1615 11 novel_not_in_catalog CA6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1139 None 38 5 1 TRUE 0 0 NA B coding 317 951 94 1044 PB.8358.1 chr16 - 1751 10 novel_not_in_catalog LMF1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 193 None 2 4 1 FALSE 0 0 NA A coding 350 1050 652 1701 PB.43.1 chr1 + 1620 11 novel_not_in_catalog CA6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1158 None 31 5 1 TRUE 0 0 NA B coding 317 951 113 1063 PB.3057.2 chr4 + 1811 4 full-splice_match SCOC ENST00000394201.8 1795 4 6 -22 no_subtype FALSE canonical NA NA 225 None 4 7 0 FALSE 0 0 NA C coding 82 246 120 365 PB.3676.1 chr5 - 1605 12 novel_not_in_catalog PDLIM7 novel NA NA NA NA no_subtype FALSE canonical NA NA 74 None 2 6 0 FALSE 0 0 NA C coding 423 1269 86 1354 PB.10814.1 chr22 - 2930 14 full-splice_match TTLL12 ENST00000216129.6 3385 14 42 413 no_subtype FALSE canonical NA NA 199 None 19 4 0 FALSE 0 0 NA A coding 644 1932 23 1954 PB.1972.1 chr3 + 2031 2 novel_in_catalog SETMAR novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 138 None 2 8 0 FALSE 0 0 NA A coding 383 1149 22 1170 PB.5471.5 chr9 + 2628 1 intergenic novelGene_1036 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5471.1 chr9 + 2890 3 full-splice_match TLR4 ENST00000355622.6 4844 3 119 1835 no_subtype FALSE canonical NA NA 242 None 66 2 0 FALSE 0 0 NA C coding 825 2475 25 2499 PB.5471.3 chr9 + 5484 4 full-splice_match TLR4 ENST00000394487.4 3908 4 112 -1688 no_subtype FALSE canonical NA NA 409 None 9 20 1 FALSE 0 0 NA C coding 799 2397 270 2666 PB.3859.4 chr6 - 1547 2 novel_not_in_catalog NUDT3 novel NA NA NA NA no_subtype TRUE canonical NA NA 660 None 7 7 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.3859.5 chr6 - 1454 1 incomplete-splice_match NUDT3 ENST00000607016.1 9905 5 1321 7131 no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA C coding 99 297 494 790 PB.3859.6 chr6 - 1210 5 full-splice_match NUDT3 ENST00000607016.1 9905 5 18 8677 no_subtype FALSE canonical NA NA 393 None 10 3 0 FALSE 0 0 NA C coding 172 516 295 810 PB.9994.5 chr19 + 1553 10 full-splice_match PSMC4 ENST00000593455.5 1532 10 -5 -16 no_subtype FALSE canonical NA NA 1320 None 5 2 0 FALSE 0 0 NA C coding 318 954 39 992 PB.9994.2 chr19 + 1469 11 novel_not_in_catalog PSMC4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1227 None 3 2 1 FALSE 0 0 NA C coding 338 1014 57 1070 PB.9994.3 chr19 + 1502 11 novel_not_in_catalog PSMC4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1262 None 3 8 1 TRUE 0 0 NA C coding 319 957 39 995 PB.3859.2 chr6 - 3154 1 incomplete-splice_match NUDT3 ENST00000607016.1 9905 5 6747 5 no_subtype FALSE canonical NA NA NA None 4 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9626.1 chr19 - 1562 9 full-splice_match RNF126 ENST00000292363.9 1694 9 124 8 no_subtype TRUE canonical NA NA 107 None 8 6 0 FALSE 0 0 NA A coding 311 933 33 965 PB.10004.1 chr19 + 2095 6 full-splice_match EGLN2 ENST00000303961.8 2102 6 5 2 no_subtype FALSE canonical NA NA 1473 None 37 5 0 FALSE 0 0 NA C coding 374 1122 405 1526 PB.4731.1 chr7 - 2525 10 full-splice_match PDIA4 ENST00000286091.8 2903 10 -11 389 no_subtype FALSE canonical NA NA 332 None 302 6 0 FALSE 0 0 NA A coding 645 1935 245 2179 PB.10004.3 chr19 + 4083 7 novel_not_in_catalog EGLN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1847 None 2 14 0 TRUE 0 0 NA C coding 374 1122 374 1495 PB.10004.2 chr19 + 3335 7 novel_not_in_catalog EGLN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1879 None 4 26 0 TRUE 0 0 NA C coding 374 1122 406 1527 PB.10004.4 chr19 + 1525 5 novel_not_in_catalog EGLN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 904 None 2 5 0 FALSE 0 0 NA C coding 125 375 583 957 PB.367.1 chr1 + 3026 1 novel_in_catalog BTF3L4 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2058.2 chr3 + 1892 1 novel_in_catalog OXSM novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA B coding 132 396 1457 1852 PB.2058.1 chr3 + 1932 5 novel_not_in_catalog OXSM novel NA NA NA NA no_subtype TRUE canonical NA NA 1492 None 2 5 1 TRUE 0 0 NA B coding 459 1377 516 1892 PB.7884.1 chr14 - 2931 10 novel_not_in_catalog DDX24 novel NA NA NA NA no_subtype TRUE canonical NA NA 82 None 172 3 0 TRUE 0 0 NA A coding 859 2577 88 2664 PB.10185.1 chr19 + 1565 1 full-splice_match CTC-444N24.11 ENST00000593427.1 4258 1 -388 3081 no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6720.1 chr11 + 2745 18 full-splice_match STT3A ENST00000392708.8 4558 18 70 1743 no_subtype FALSE canonical NA NA 2168 None 55 4 0 FALSE 0 0 NA A coding 705 2115 90 2204 PB.3028.1 chr4 - 1621 13 full-splice_match ANXA5 ENST00000296511.9 1762 13 92 49 no_subtype FALSE canonical NA NA 159 None 266 3 0 FALSE 0 0 NA A coding 320 960 195 1154 PB.2000.1 chr3 - 1353 10 novel_not_in_catalog SEC13 novel NA NA NA NA no_subtype FALSE canonical NA NA 66 None 6 2 0 TRUE 0 0 NA C coding 322 966 60 1025 PB.2000.2 chr3 - 1313 9 full-splice_match SEC13 ENST00000350697.7 1425 9 106 6 no_subtype FALSE canonical NA NA 23 None 6 2 0 FALSE 0 0 NA C coding 322 966 21 986 PB.215.2 chr1 - 5791 7 novel_in_catalog SNRNP40 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 143 None 2 35 1 FALSE 0 0 NA C coding 302 906 3 908 PB.7851.4 chr14 - 2813 1 genic_intron novelGene_810 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 29 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3337.1 chr5 + 2762 2 full-splice_match F2RL1 ENST00000296677.4 2914 2 147 5 no_subtype FALSE canonical NA NA 141 None 51 8 0 FALSE 0 0 NA A coding 397 1191 60 1250 PB.215.1 chr1 - 1467 10 full-splice_match SNRNP40 ENST00000263694.8 1597 10 16 114 no_subtype FALSE canonical NA NA 144 None 47 4 0 FALSE 0 0 NA C coding 357 1071 4 1074 PB.10909.1 chrX - 639 1 genic_intron novelGene_296 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2383.4 chr3 + 2847 14 novel_in_catalog ATP6V1A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1776 None 5 6 0 FALSE 0 0 NA C coding 617 1851 16 1866 PB.10718.9 chr22 + 1515 8 novel_in_catalog FBXO7 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 850 None 2 4 0 FALSE 0 0 NA C coding 366 1098 137 1234 PB.10718.8 chr22 + 1624 10 novel_not_in_catalog FBXO7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 948 None 2 7 1 TRUE 0 0 NA C coding 366 1098 235 1332 PB.1325.2 chr2 + 1495 9 novel_not_in_catalog EPCAM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1050 None 4 3 0 FALSE 0 0 NA C coding 298 894 196 1089 PB.2383.2 chr3 + 3171 2 novel_not_in_catalog ATP6V1A novel NA NA NA NA no_subtype FALSE canonical NA NA 1843 None 2 35 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.10718.5 chr22 + 1847 10 novel_not_in_catalog FBXO7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1163 None 33 3 0 TRUE 0 0 NA C coding 408 1224 324 1547 PB.10718.4 chr22 + 1715 10 novel_not_in_catalog FBXO7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1036 None 4 3 0 TRUE 0 0 NA C coding 443 1329 92 1420 PB.10718.7 chr22 + 1701 10 novel_not_in_catalog FBXO7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1017 None 3 7 1 TRUE 0 0 NA C coding 434 1302 100 1401 PB.10336.2 chr20 + 3138 4 novel_not_in_catalog DYNLRB1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2339 None 4 22 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.10718.1 chr22 + 1769 10 novel_not_in_catalog FBXO7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1089 None 29 3 0 TRUE 0 0 NA C coding 408 1224 250 1473 PB.1457.10 chr2 - 2664 14 novel_in_catalog IMMT novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 125 None 2 4 0 FALSE 0 0 NA B coding 753 2259 81 2339 PB.10718.3 chr22 + 1963 10 novel_not_in_catalog FBXO7 novel NA NA NA NA no_subtype TRUE canonical NA NA 1279 None 8 3 0 TRUE 0 0 NA C coding 366 1098 566 1663 PB.10718.2 chr22 + 2143 9 full-splice_match FBXO7 ENST00000266087.11 2195 9 29 23 no_subtype FALSE canonical NA NA 1480 None 2 3 0 FALSE 0 0 NA C coding 522 1566 299 1864 PB.6794.4 chr12 + 3399 6 incomplete-splice_match ATN1 ENST00000356654.8 4351 10 949 3 internal_fragment FALSE canonical NA NA 2827 None 5 6 0 FALSE 0 0 NA A coding 856 2568 291 2858 PB.6794.7 chr12 + 6009 14 novel_not_in_catalog PTPN6 novel NA NA NA NA no_subtype FALSE canonical NA NA 5821 None 4 30 3 TRUE 0 0 NA C coding 271 813 4981 5793 PB.6794.6 chr12 + 2064 16 full-splice_match PTPN6 ENST00000318974.13 2245 16 182 -1 no_subtype FALSE canonical NA NA 1875 None 64 0 0 FALSE 0 0 NA C coding 595 1785 63 1847 PB.6794.1 chr12 + 2580 11 novel_in_catalog ENO2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1615 None 2 9 0 FALSE 0 0 NA C coding 356 1068 108 1175 PB.10759.13 chr22 - 2643 11 novel_not_in_catalog DDX17 novel NA NA NA NA no_subtype FALSE canonical NA NA 349 None 2 15 0 TRUE 0 0 NA C coding 449 1347 300 1646 PB.6794.3 chr12 + 3785 17 novel_not_in_catalog PTPN6 novel NA NA NA NA no_subtype TRUE canonical NA NA 3595 None 3 8 2 TRUE 0 0 NA C coding 481 1443 2125 3567 PB.6794.2 chr12 + 3440 11 full-splice_match ENO2 ENST00000535366.5 2827 11 -614 1 no_subtype FALSE canonical NA NA 2475 None 2 12 0 FALSE 0 0 NA C coding 434 1302 1241 2542 PB.2884.1 chr4 - 1605 1 incomplete-splice_match CXCL9 ENST00000264888.5 2740 4 939 197 no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2884.3 chr4 - 2563 4 full-splice_match CXCL9 ENST00000264888.5 2740 4 -21 198 no_subtype FALSE canonical NA NA 124 None 13 3 0 FALSE 0 0 NA C coding 125 375 61 435 PB.6107.3 chr11 - 1699 11 novel_not_in_catalog SIGIRR novel NA NA NA NA no_subtype FALSE non_canonical NA NA 178 None 8 14 1 TRUE 0 0 NA C coding 396 1188 332 1519 PB.6794.8 chr12 + 2170 16 novel_not_in_catalog PTPN6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1937 None 4 0 0 FALSE 0 0 NA C coding 595 1785 125 1909 PB.6107.1 chr11 - 1612 10 full-splice_match SIGIRR ENST00000332725.7 1639 10 26 1 no_subtype TRUE canonical NA NA 47 None 7 5 0 FALSE 0 0 NA C coding 410 1230 201 1430 PB.5106.2 chr8 - 1411 13 novel_not_in_catalog ANXA13 novel NA NA NA NA no_subtype FALSE canonical NA NA 85 None 3 1 0 TRUE 0 0 NA B coding 316 948 71 1018 PB.9376.6 chr17 - 4034 33 novel_not_in_catalog UNC13D novel NA NA NA NA no_subtype FALSE canonical NA NA 170 None 8 14 2 TRUE 0 0 NA B coding 1090 3270 54 3323 PB.8040.4 chr15 + 3044 18 full-splice_match TUBGCP4 ENST00000564079.5 6798 18 37 3717 no_subtype TRUE canonical NA NA 2191 None 7 4 0 FALSE 0 0 NA C coding 666 1998 204 2201 PB.308.1 chr1 + 1679 3 full-splice_match ZNF691 ENST00000372507.5 1683 3 -5 9 no_subtype FALSE canonical NA NA 160 None 2 4 0 FALSE 0 0 NA C coding 284 852 170 1021 PB.8040.2 chr15 + 2923 18 novel_not_in_catalog TUBGCP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 2035 None 4 8 0 FALSE 0 0 NA C coding 530 1590 456 2045 PB.308.2 chr1 + 1518 1 novel_in_catalog ZNF691 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA C coding 284 852 12 863 PB.4414.1 chr7 + 3600 2 genic_intron novelGene_469 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3332 None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11062.1 chrX - 2515 2 antisense novelGene_RP11-346E8.1_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 1482 None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5493.1 chr9 - 6932 2 genic STRBP novel NA NA NA NA no_subtype FALSE canonical NA NA 2897 None 3 46 1 TRUE 0 0 NA A coding 133 399 1397 1795 PB.4853.1 chr8 + 4026 32 novel_not_in_catalog PTK2B novel NA NA NA NA no_subtype FALSE canonical NA NA 2978 None 7 8 2 TRUE 0 0 NA B coding 1009 3027 165 3191 PB.1070.2 chr1 + 3475 7 novel_not_in_catalog CAPN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2340 None 2 12 0 TRUE 0 0 NA B coding 250 750 115 864 PB.1359.1 chr2 + 1364 4 full-splice_match PEX13 ENST00000295030.5 4470 4 33 3073 no_subtype FALSE canonical NA NA 918 None 2 2 0 FALSE 0 0 NA A coding 403 1209 6 1214 PB.6048.2 chr10 - 4181 22 full-splice_match EIF3A ENST00000369144.7 6646 22 -21 2486 no_subtype FALSE canonical NA NA 198 None 11 3 0 FALSE 0 0 NA C coding 1344 4032 150 4181 PB.1185.1 chr2 + 1794 12 novel_in_catalog TAF1B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1259 None 2 5 0 FALSE 0 0 NA A coding 444 1332 80 1411 PB.5698.1 chr10 - 1661 2 novel_not_in_catalog VIM-AS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 543 None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10746.1 chr22 - 6914 2 antisense novelGene_SH3BP1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 6802 None 2 34 0 FALSE 0 0 NA A coding 128 384 2463 2846 PB.5698.3 chr10 - 3422 2 genic RP11-124N14.3 novel NA NA NA NA no_subtype FALSE canonical NA NA 527 None 2 24 1 TRUE 0 0 NA A coding 105 315 2417 2731 PB.3604.1 chr5 + 2743 1 incomplete-splice_match LARP1 ENST00000336314.8 6595 19 3845 8 no_subtype FALSE canonical NA NA NA None 8 13 0 FALSE 0 0 NA A coding 153 459 188 646 PB.1258.1 chr2 - 2752 1 novel_in_catalog MEMO1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3725.1 chr6 + 3438 1 genic_intron novelGene_52 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1258.2 chr2 - 1476 10 full-splice_match MEMO1 ENST00000404530.5 1482 10 0 6 no_subtype FALSE canonical NA NA 33 None 2 0 0 FALSE 0 0 NA C coding 297 891 51 941 PB.6978.5 chr12 - 1487 10 novel_not_in_catalog BIN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 133 None 6 0 0 FALSE 0 0 NA B coding 478 1434 53 1486 PB.6978.4 chr12 - 2182 13 novel_not_in_catalog BIN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 115 None 49 1 0 FALSE 0 0 NA B coding 563 1689 35 1723 PB.6978.6 chr12 - 1707 1 novel_in_catalog BIN2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA B coding 102 306 24 329 PB.881.5 chr1 - 4031 3 novel_in_catalog KIAA0040 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 253 None 3 19 0 FALSE 0 0 NA C coding 99 297 563 859 PB.1206.1 chr2 - 6070 20 novel_in_catalog PUM2 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 254 None 4 18 0 FALSE 0 0 NA A coding 985 2955 273 3227 PB.6926.2 chr12 + 2888 2 novel_not_in_catalog PCED1B novel NA NA NA NA no_subtype FALSE canonical NA NA 610 None 2 20 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.1070.6 chr1 + 1784 11 novel_in_catalog CAPN2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 776 None 2 4 0 FALSE 0 0 NA B coding 121 363 435 797 PB.6027.1 chr10 - 1777 11 full-splice_match ZDHHC6 ENST00000369405.7 2170 11 -30 423 no_subtype FALSE canonical NA NA 240 None 15 6 0 FALSE 0 0 NA C coding 413 1239 455 1693 PB.5483.1 chr9 - 2584 6 full-splice_match RBM18 ENST00000417201.3 4974 6 12 2378 no_subtype FALSE canonical NA NA 113 None 9 8 0 FALSE 0 0 NA A coding 190 570 130 699 PB.9827.1 chr19 + 2965 23 novel_not_in_catalog PKN1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2690 None 3 7 1 TRUE 0 0 NA B coding 942 2826 66 2891 PB.9827.3 chr19 + 3173 22 novel_not_in_catalog PKN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2891 None 5 8 0 TRUE 0 0 NA B coding 724 2172 15 2186 PB.9827.2 chr19 + 2936 23 novel_not_in_catalog PKN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2654 None 101 2 0 TRUE 0 0 NA B coding 948 2844 12 2855 PB.976.1 chr1 + 2605 2 full-splice_match BTG2 ENST00000290551.4 2712 2 98 9 no_subtype FALSE canonical NA NA 115 None 255 13 0 FALSE 0 0 NA C coding 85 255 193 447 PB.976.2 chr1 + 1495 1 incomplete-splice_match BTG2 ENST00000290551.4 2712 2 1212 6 no_subtype FALSE canonical NA NA NA None 13 5 0 FALSE 0 0 NA C coding 122 366 792 1157 PB.3540.1 chr5 + 2969 4 full-splice_match PCDHAC2 ENST00000289269.6 5963 4 499 2495 no_subtype FALSE canonical NA NA 2746 None 7 0 0 FALSE 0 0 NA A coding 978 2934 34 2967 PB.5330.1 chr9 - 1504 4 full-splice_match RFK ENST00000376736.5 2684 4 88 1092 no_subtype FALSE canonical NA NA 328 None 33 7 0 FALSE 0 0 NA A coding 155 465 247 711 PB.881.4 chr1 - 3989 4 full-splice_match KIAA0040 ENST00000423313.5 4564 4 17 558 no_subtype FALSE canonical NA NA 137 None 4 17 1 FALSE 0 0 NA C coding 99 297 521 817 PB.2277.2 chr3 + 3292 1 novel_in_catalog ATXN7 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 13 0 FALSE 0 0 NA A coding 102 306 372 677 PB.11009.1 chrX + 4277 22 novel_not_in_catalog HEPH novel NA NA NA NA no_subtype TRUE canonical NA NA 3337 None 8 3 0 FALSE 0 0 NA A coding 1161 3483 82 3564 PB.10875.1 chrX - 3514 9 novel_not_in_catalog FANCB novel NA NA NA NA no_subtype TRUE canonical NA NA 86 None 2 17 2 FALSE 0 0 NA A coding 852 2556 175 2730 PB.3188.1 chr5 + 2790 1 genic_intron novelGene_151 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8036.1 chr15 + 1432 11 full-splice_match CCNDBP1 ENST00000300213.8 3660 11 242 1986 no_subtype FALSE canonical NA NA 968 None 111 2 0 FALSE 0 0 NA A coding 360 1080 1 1080 PB.2678.12 chr3 - 2774 4 novel_not_in_catalog ACAP2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1271 None 2 31 3 TRUE 0 0 NA B non_coding NA NA NA NA PB.320.1 chr1 - 1785 6 novel_in_catalog HYI novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1304 None 2 26 1 FALSE 0 0 NA A coding 210 630 1080 1709 PB.5646.4 chr10 + 3611 14 full-splice_match ZMYND11 ENST00000381607.8 3898 14 17 270 no_subtype FALSE canonical NA NA 1602 None 3 9 0 FALSE 0 0 NA C coding 548 1644 79 1722 PB.5646.5 chr10 + 3756 15 novel_not_in_catalog ZMYND11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1747 None 5 10 1 FALSE 0 0 NA C coding 602 1806 62 1867 PB.5646.7 chr10 + 3980 14 novel_in_catalog ZMYND11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1707 None 2 9 0 FALSE 0 0 NA C coding 602 1806 22 1827 PB.4473.1 chr7 + 2644 12 novel_not_in_catalog DTX2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2025 None 15 2 0 TRUE 0 0 NA B coding 622 1866 385 2250 PB.5130.1 chr8 + 1658 5 novel_in_catalog PHF20L1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 659 None 2 5 0 FALSE 0 0 NA B coding 160 480 320 799 PB.5646.2 chr10 + 6273 12 novel_not_in_catalog ZMYND11 novel NA NA NA NA no_subtype FALSE canonical NA NA 4263 None 2 42 0 TRUE 0 0 NA C coding 360 1080 3304 4383 PB.5646.3 chr10 + 3742 15 novel_in_catalog ZMYND11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1733 None 26 8 0 FALSE 0 0 NA C coding 602 1806 48 1853 PB.1801.1 chr2 + 2233 12 full-splice_match STRADB ENST00000194530.7 2293 12 54 6 no_subtype FALSE canonical NA NA 1424 None 3 5 2 FALSE 0 0 NA C coding 418 1254 312 1565 PB.3843.1 chr6 - 2868 10 novel_not_in_catalog RXRB novel NA NA NA NA no_subtype FALSE canonical NA NA 414 None 9 9 1 FALSE 0 0 NA C coding 403 1209 261 1469 PB.3843.3 chr6 - 2641 9 novel_in_catalog RXRB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 420 None 2 11 1 FALSE 0 0 NA C coding 441 1323 226 1548 PB.3843.2 chr6 - 2889 10 full-splice_match RXRB ENST00000374685.8 2846 10 -48 5 no_subtype FALSE canonical NA NA 421 None 5 7 0 FALSE 0 0 NA C coding 510 1530 268 1797 PB.3672.7 chr5 + 1765 11 novel_not_in_catalog RGS14 novel NA NA NA NA no_subtype FALSE canonical NA NA 1042 None 2 2 0 FALSE 0 0 NA B coding 402 1206 37 1242 PB.3672.4 chr5 + 2663 15 novel_not_in_catalog RGS14 novel NA NA NA NA no_subtype FALSE canonical NA NA 1942 None 9 6 0 FALSE 0 0 NA B coding 337 1011 1132 2142 PB.3672.3 chr5 + 2324 16 novel_not_in_catalog RGS14 novel NA NA NA NA no_subtype FALSE canonical NA NA 1604 None 8 6 0 FALSE 0 0 NA B coding 567 1701 104 1804 PB.710.3 chr1 - 3427 4 novel_not_in_catalog PYGO2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 379 None 2 28 2 TRUE 0 0 NA C coding 369 1107 569 1675 PB.3672.1 chr5 + 2715 1 novel_in_catalog RGS14 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA B coding 132 396 636 1031 PB.9824.3 chr19 + 3174 20 full-splice_match ADGRE5 ENST00000242786.5 3188 20 10 4 no_subtype FALSE canonical NA NA 2548 None 178 6 0 FALSE 0 0 NA C coding 835 2505 71 2575 PB.2365.2 chr3 + 3263 17 novel_not_in_catalog CD96 novel NA NA NA NA no_subtype FALSE canonical NA NA 2987 None 2 13 1 TRUE 0 0 NA B coding 569 1707 31 1737 PB.2798.1 chr4 - 3532 1 genic_intron novelGene_381 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 15 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2798.2 chr4 - 3541 1 antisense novelGene_KLF3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 17 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1262.2 chr2 + 1945 6 full-splice_match YIPF4 ENST00000238831.8 11949 6 0 10004 no_subtype FALSE canonical NA NA 843 None 6 7 0 FALSE 0 0 NA C coding 244 732 247 978 PB.6942.3 chr12 - 3233 18 novel_not_in_catalog DDX23 novel NA NA NA NA no_subtype FALSE canonical NA NA 67 None 2 1 0 TRUE 0 0 NA C coding 820 2460 71 2530 PB.7041.1 chr12 - 2596 18 full-splice_match GLS2 ENST00000311966.8 2623 18 19 8 no_subtype FALSE canonical NA NA 442 None 2 5 0 FALSE 0 0 NA A coding 535 1605 462 2066 PB.1262.1 chr2 + 3738 8 novel_not_in_catalog YIPF4 novel NA NA NA NA no_subtype TRUE canonical NA NA 3187 None 2 34 1 TRUE 0 0 NA C coding 244 732 256 987 PB.8098.2 chr15 - 3302 6 novel_in_catalog RAB27A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 78 None 22 10 0 FALSE 0 0 NA C coding 221 663 101 763 PB.8098.3 chr15 - 2808 7 full-splice_match RAB27A ENST00000336787.5 3446 7 -25 663 no_subtype FALSE canonical NA NA 125 None 14 7 0 FALSE 0 0 NA C coding 221 663 268 930 PB.266.67 chr1 - 5715 20 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 102 None 2 21 5 TRUE 0 0 NA C coding 704 2112 3343 5454 PB.8857.1 chr17 + 1305 8 novel_not_in_catalog SPNS3 novel NA NA NA NA no_subtype FALSE canonical NA NA 895 None 2 3 0 FALSE 0 0 NA A coding 304 912 70 981 PB.4759.1 chr7 - 3499 18 novel_not_in_catalog PRKAG2 novel NA NA NA NA no_subtype FALSE canonical NA NA 833 None 2 9 0 TRUE 0 0 NA B coding 563 1689 735 2423 PB.266.63 chr1 - 2710 16 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 2 3 2 TRUE 0 0 NA C coding 773 2319 131 2449 PB.10333.1 chr20 - 2134 10 full-splice_match AHCY ENST00000217426.6 2143 10 1 8 no_subtype FALSE canonical NA NA 105 None 17 2 0 FALSE 0 0 NA A coding 432 1296 78 1373 PB.266.61 chr1 - 5804 19 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 88 None 2 27 4 TRUE 0 0 NA C coding 704 2112 3431 5542 PB.266.60 chr1 - 3365 17 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 3 4 1 FALSE 0 0 NA C coding 605 1815 484 2298 PB.8542.5 chr16 + 2820 14 novel_not_in_catalog MVP novel NA NA NA NA no_subtype FALSE canonical NA NA 2563 None 4 0 0 TRUE 0 0 NA B coding 479 1437 36 1472 PB.8542.1 chr16 + 2759 15 novel_not_in_catalog MVP novel NA NA NA NA no_subtype FALSE canonical NA NA 2489 None 610 1 0 TRUE 0 0 NA B coding 893 2679 36 2714 PB.266.69 chr1 - 3001 17 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 2 4 2 FALSE 0 0 NA C coding 679 2037 131 2167 PB.266.68 chr1 - 3193 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 95 None 4 3 1 FALSE 0 0 NA C coding 836 2508 426 2933 PB.10760.1 chr22 + 1072 4 full-splice_match TOMM22 ENST00000216034.5 2040 4 25 943 no_subtype FALSE canonical NA NA 360 None 6 6 0 FALSE 0 0 NA A coding 142 426 7 432 PB.10092.2 chr19 + 1549 12 full-splice_match CYTH2 ENST00000452733.6 4780 12 302 2929 no_subtype TRUE canonical NA NA 1286 None 19 1 0 FALSE 0 0 NA A coding 399 1197 175 1371 PB.1926.1 chr2 + 3185 18 novel_not_in_catalog ATG16L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1777 None 21 7 1 TRUE 0 0 NA B coding 588 1764 105 1868 PB.1926.3 chr2 + 3568 18 novel_not_in_catalog ATG16L1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2160 None 3 8 0 TRUE 0 0 NA B coding 470 1410 158 1567 PB.1926.2 chr2 + 3280 19 novel_not_in_catalog ATG16L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1871 None 14 6 0 TRUE 0 0 NA B coding 607 1821 142 1962 PB.4016.2 chr6 + 2200 16 full-splice_match CYB5R4 ENST00000369681.9 9252 16 52 7000 no_subtype FALSE canonical NA NA 1599 None 2 5 1 FALSE 0 0 NA C coding 521 1563 89 1651 PB.4016.3 chr6 + 3949 2 novel_not_in_catalog CYB5R4 novel NA NA NA NA no_subtype FALSE canonical NA NA 3498 None 2 24 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.8478.3 chr16 + 5828 23 novel_not_in_catalog C16orf62 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5324 None 2 28 2 TRUE 0 0 NA C coding 270 810 10 819 PB.6588.1 chr11 - 1923 11 full-splice_match SLC36A4 ENST00000326402.8 6012 11 -57 4146 no_subtype FALSE canonical NA NA 243 None 4 2 0 FALSE 0 0 NA A coding 504 1512 189 1700 PB.7748.1 chr14 - 3225 2 genic_intron novelGene_586 novel NA NA NA NA no_subtype FALSE canonical NA NA 2979 None 17 24 1 FALSE 0 0 NA A coding 38 114 199 312 PB.707.3 chr1 - 5804 15 novel_not_in_catalog ADAR novel NA NA NA NA no_subtype FALSE canonical NA NA 1214 None 20 14 0 TRUE 0 0 NA B coding 931 2793 499 3291 PB.5354.3 chr9 + 5887 25 novel_in_catalog DAPK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3365 None 9 7 0 FALSE 0 0 NA C coding 1430 4290 306 4595 PB.8534.3 chr16 + 2045 10 novel_in_catalog LAT novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1451 None 2 18 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.8534.1 chr16 + 1664 12 novel_not_in_catalog LAT novel NA NA NA NA no_subtype FALSE canonical NA NA 1079 None 143 11 2 FALSE 0 0 NA B coding 133 399 671 1069 PB.5156.1 chr8 + 2896 9 novel_not_in_catalog ZNF707 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2710 None 2 24 2 TRUE 0 0 NA A coding 369 1107 247 1353 PB.9878.1 chr19 + 1354 5 full-splice_match MPV17L2 ENST00000599612.2 1408 5 36 18 no_subtype FALSE canonical NA NA 628 None 3 1 0 FALSE 0 0 NA A coding 206 618 65 682 PB.1457.3 chr2 - 2681 15 novel_not_in_catalog IMMT novel NA NA NA NA no_subtype FALSE non_canonical NA NA 125 None 31 5 1 TRUE 0 0 NA B coding 757 2271 81 2351 PB.6648.1 chr11 - 2857 16 full-splice_match ZW10 ENST00000200135.7 2992 16 119 16 no_subtype FALSE canonical NA NA 131 None 29 3 0 FALSE 0 0 NA A coding 779 2337 27 2363 PB.181.1 chr1 + 2705 4 genic_intron novelGene_268 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2471 None 2 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3565.1 chr5 + 2008 1 full-splice_match ADRB2 ENST00000305988.5 3443 1 1367 68 no_subtype FALSE canonical NA NA NA None 9 5 0 FALSE 0 0 NA A coding 413 1239 221 1459 PB.7174.2 chr12 - 1974 19 full-splice_match LTA4H ENST00000228740.6 2139 19 84 81 no_subtype TRUE canonical NA NA 217 None 26 0 0 FALSE 0 0 NA A coding 611 1833 59 1891 PB.3205.1 chr5 - 3039 1 antisense novelGene_IL7R_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 14 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3799.3 chr6 - 2929 5 novel_in_catalog ZNF322 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 295 None 4 7 2 FALSE 0 0 NA C coding 402 1206 669 1874 PB.3799.2 chr6 - 2930 6 novel_not_in_catalog ZNF322 novel NA NA NA NA no_subtype FALSE canonical NA NA 295 None 3 8 2 TRUE 0 0 NA C coding 402 1206 669 1874 PB.3799.1 chr6 - 2884 4 full-splice_match ZNF322 ENST00000415922.6 4817 4 16 1917 no_subtype FALSE canonical NA NA 296 None 14 7 1 FALSE 0 0 NA C coding 402 1206 631 1836 PB.282.1 chr1 - 1552 1 genic_intron novelGene_392 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10323.1 chr20 - 3749 1 incomplete-splice_match NOL4L ENST00000359676.9 5991 8 2232 11 no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A coding 141 423 1451 1873 PB.6552.1 chr11 - 1384 7 full-splice_match CLNS1A ENST00000525428.5 2993 7 -18 1627 no_subtype FALSE canonical NA NA 234 None 36 2 0 FALSE 0 0 NA A coding 237 711 110 820 PB.8847.1 chr17 + 5745 11 novel_not_in_catalog CTNS novel NA NA NA NA no_subtype FALSE canonical NA NA 4441 None 2 42 1 TRUE 0 0 NA B coding 248 744 581 1324 PB.8847.2 chr17 + 2509 12 novel_not_in_catalog CTNS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1206 None 2 14 2 TRUE 0 0 NA B coding 348 1044 294 1337 PB.9748.3 chr19 + 3761 13 novel_not_in_catalog PPAN-P2RY11 novel NA NA NA NA no_subtype FALSE canonical NA NA 2029 None 2 22 1 FALSE 0 0 NA A coding 473 1419 33 1451 PB.9748.1 chr19 + 1586 12 novel_not_in_catalog PPAN novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1241 None 29 3 1 TRUE 0 0 NA A coding 356 1068 46 1113 PB.1011.3 chr1 - 1899 8 full-splice_match FCMR ENST00000367091.7 1950 8 57 -6 no_subtype FALSE canonical NA NA 124 None 30 5 0 FALSE 0 0 NA C coding 390 1170 88 1257 PB.7188.1 chr12 + 1729 11 full-splice_match ACTR6 ENST00000188312.6 2464 11 730 5 no_subtype FALSE canonical NA NA 1096 None 8 5 0 FALSE 0 0 NA A coding 396 1188 36 1223 PB.5536.1 chr9 - 1593 7 novel_not_in_catalog PTGES2 novel NA NA NA NA no_subtype FALSE canonical NA NA 287 None 14 5 1 FALSE 0 0 NA A coding 309 927 9 935 PB.5981.1 chr10 - 5665 2 genic FBXW4 novel NA NA NA NA no_subtype FALSE canonical NA NA 3766 None 4 31 1 TRUE 0 0 NA A coding 120 360 1536 1895 PB.1131.6 chr1 - 2608 1 novel_in_catalog LYST novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1131.1 chr1 - 6357 30 incomplete-splice_match LYST ENST00000389793.6 13480 53 7122 1 5prime_fragment FALSE canonical NA NA 112 None 2 10 0 FALSE 0 0 NA B coding 1475 4425 32 4456 PB.11157.1 chrX + 3246 12 full-splice_match STK26 ENST00000394334.6 3288 12 40 2 no_subtype TRUE canonical NA NA 1439 None 9 11 0 FALSE 0 0 NA A coding 416 1248 214 1461 PB.1734.3 chr2 - 4441 31 full-splice_match NCKAP1 ENST00000361354.8 20347 31 127 15779 no_subtype FALSE canonical NA NA 354 None 2 2 0 FALSE 0 0 NA C coding 1128 3384 247 3630 PB.5508.2 chr9 + 3125 16 incomplete-splice_match GAPVD1 ENST00000470056.5 8923 25 0 5798 3prime_fragment FALSE canonical NA NA 3037 None 2 4 0 FALSE 0 0 NA B coding 988 2964 161 3124 PB.856.4 chr1 - 5592 8 novel_not_in_catalog SELL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 115 None 2 13 0 TRUE 0 0 NA C coding 245 735 74 808 PB.11054.1 chrX + 2893 2 full-splice_match P2RY10 ENST00000544091.1 1597 2 71 -1367 no_subtype FALSE canonical NA NA 93 None 29 11 0 FALSE 0 0 NA C coding 339 1017 107 1123 PB.8863.1 chr17 + 806 6 full-splice_match PSMB6 ENST00000270586.7 852 6 42 4 no_subtype FALSE canonical NA NA 586 None 3 4 0 FALSE 0 0 NA A coding 239 717 10 726 PB.1790.1 chr2 - 2821 1 genic_intron novelGene_1376 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9837.2 chr19 - 3274 15 novel_in_catalog AKAP8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 93 None 4 12 1 FALSE 0 0 NA C coding 364 1092 75 1166 PB.9837.3 chr19 - 3252 14 novel_in_catalog AKAP8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 229 None 2 20 1 FALSE 0 0 NA C coding 618 1854 433 2286 PB.10104.2 chr19 + 3086 18 novel_not_in_catalog ALDH16A1 novel NA NA NA NA no_subtype TRUE canonical NA NA 3012 None 2 12 0 TRUE 0 0 NA C coding 802 2406 32 2437 PB.9837.1 chr19 - 3058 14 full-splice_match AKAP8 ENST00000269701.6 3670 14 45 567 no_subtype FALSE canonical NA NA 35 None 15 11 1 FALSE 0 0 NA C coding 692 2076 17 2092 PB.2056.4 chr3 - 3136 20 incomplete-splice_match TOP2B ENST00000264331.8 5358 36 2133 89 5prime_fragment FALSE canonical NA NA 51 None 2 3 0 FALSE 0 0 NA B coding 937 2811 10 2820 PB.2056.5 chr3 - 3914 26 incomplete-splice_match TOP2B ENST00000264331.8 5358 36 1343 101 5prime_fragment FALSE canonical NA NA 137 None 2 5 0 FALSE 0 0 NA B coding 1104 3312 299 3610 PB.3544.2 chr5 + 1551 1 incomplete-splice_match PCDHGA1 ENST00000517417.2 4604 4 3010 44 no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8560.1 chr16 + 1375 1 incomplete-splice_match ITGAL ENST00000356798.10 5213 31 3836 3 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7576.2 chr13 + 3840 12 incomplete-splice_match ARHGEF7 ENST00000426073.6 4921 20 1072 9 internal_fragment FALSE canonical NA NA 1102 None 2 17 0 FALSE 0 0 NA B coding 401 1203 20 1222 PB.4827.1 chr8 + 2931 21 full-splice_match SORBS3 ENST00000240123.11 3459 21 232 296 no_subtype FALSE canonical NA NA 2105 None 3 8 0 FALSE 0 0 NA C coding 671 2013 152 2164 PB.3106.1 chr4 - 2899 8 full-splice_match CTSO ENST00000433477.3 2954 8 35 20 no_subtype FALSE canonical NA NA 170 None 119 8 0 FALSE 0 0 NA C coding 321 963 36 998 PB.4827.4 chr8 + 1957 10 full-splice_match SORBS3 ENST00000523965.5 2028 10 68 3 no_subtype FALSE canonical NA NA 1131 None 4 8 0 FALSE 0 0 NA C coding 329 987 204 1190 PB.2267.1 chr3 - 1073 8 full-splice_match DNASE1L3 ENST00000394549.6 1294 8 218 3 no_subtype FALSE canonical NA NA 240 None 6 0 0 FALSE 0 0 NA A coding 305 915 100 1014 PB.6441.4 chr11 + 1845 12 full-splice_match KAT5 ENST00000530446.5 1697 12 90 -238 no_subtype FALSE canonical NA NA 1289 None 8 10 0 FALSE 0 0 NA C coding 302 906 516 1421 PB.8161.4 chr15 - 5631 31 incomplete-splice_match DENND4A ENST00000443035.7 8665 33 419 2615 5prime_fragment FALSE canonical NA NA 108 None 2 7 0 FALSE 0 0 NA B coding 1756 5268 248 5515 PB.2312.1 chr3 - 2937 16 full-splice_match GBE1 ENST00000429644.6 3461 16 514 10 no_subtype FALSE canonical NA NA 273 None 37 6 0 FALSE 0 0 NA C coding 702 2106 131 2236 PB.8161.6 chr15 - 1798 6 novel_not_in_catalog DENND4A novel NA NA NA NA no_subtype FALSE canonical NA NA 231 None 3 5 0 TRUE 0 0 NA B coding 270 810 917 1726 PB.6441.1 chr11 + 1823 13 full-splice_match KAT5 ENST00000352980.8 2059 13 234 2 no_subtype FALSE canonical NA NA 1267 None 9 5 0 FALSE 0 0 NA C coding 461 1383 17 1399 PB.8161.3 chr15 - 5639 30 novel_in_catalog DENND4A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 244 None 2 3 0 FALSE 0 0 NA B coding 1713 5139 384 5522 PB.8161.2 chr15 - 5793 30 incomplete-splice_match DENND4A ENST00000431932.6 5875 32 493 -411 5prime_fragment FALSE canonical NA NA 27 None 2 4 0 FALSE 0 0 NA B coding 1713 5139 167 5305 PB.9001.1 chr17 - 3773 24 full-splice_match SPAG5 ENST00000321765.9 4040 24 264 3 no_subtype FALSE canonical NA NA 120 None 27 4 0 FALSE 0 0 NA C coding 1193 3579 70 3648 PB.9001.2 chr17 - 3192 24 novel_in_catalog SPAG5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 120 None 2 0 0 FALSE 0 0 NA C coding 919 2757 303 3059 PB.8161.9 chr15 - 2643 7 novel_not_in_catalog DENND4A novel NA NA NA NA no_subtype FALSE canonical NA NA 117 None 2 8 0 TRUE 0 0 NA B coding 271 813 222 1034 PB.8161.8 chr15 - 1526 1 genic_intron novelGene_617 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7180.1 chr12 + 3617 4 full-splice_match TMPO ENST00000266732.8 3615 4 -10 8 no_subtype FALSE canonical NA NA 813 None 5 11 0 FALSE 0 0 NA C coding 694 2082 249 2330 PB.6652.1 chr11 + 1827 5 full-splice_match RBM7 ENST00000375490.9 2064 5 218 19 no_subtype FALSE canonical NA NA 366 None 53 4 0 FALSE 0 0 NA A coding 201 603 124 726 PB.10995.15 chrX - 1799 11 novel_not_in_catalog ALAS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 28 None 11 1 0 FALSE 0 0 NA C coding 545 1635 44 1678 PB.10995.16 chrX - 1837 10 novel_not_in_catalog ALAS2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 28 None 3 7 1 TRUE 0 0 NA C coding 434 1302 415 1716 PB.10995.12 chrX - 1924 12 novel_not_in_catalog ALAS2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 40 None 3 18 4 TRUE 0 0 NA C coding 386 1158 646 1803 PB.10995.13 chrX - 1921 11 full-splice_match ALAS2 ENST00000396198.7 1936 11 8 7 no_subtype FALSE canonical NA NA 28 None 4 2 0 FALSE 0 0 NA C coding 550 1650 151 1800 PB.9180.1 chr17 - 1848 2 full-splice_match AC002117.1 ENST00000589950.1 570 2 0 -1278 no_subtype FALSE canonical NA NA 50 None 2 8 0 FALSE 0 0 NA C coding 196 588 631 1218 PB.2071.1 chr3 + 6431 2 genic_intron novelGene_295 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1333 None 2 59 1 FALSE 0 0 NA A coding 100 300 4582 4881 PB.6173.4 chr11 - 3912 11 novel_in_catalog TRIM3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 129 None 7 11 0 FALSE 0 0 NA C coding 728 2184 167 2350 PB.9180.2 chr17 - 2581 1 genic AC002117.1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6173.2 chr11 - 2795 12 full-splice_match TRIM3 ENST00000345851.7 2879 12 79 5 no_subtype FALSE canonical NA NA 115 None 8 3 0 FALSE 0 0 NA C coding 744 2232 153 2384 PB.6173.3 chr11 - 3963 11 novel_not_in_catalog TRIM3 novel NA NA NA NA no_subtype FALSE canonical NA NA 177 None 3 12 2 FALSE 0 0 NA C coding 728 2184 215 2398 PB.548.1 chr1 - 2170 19 novel_not_in_catalog EPS8L3 novel NA NA NA NA no_subtype FALSE canonical NA NA 96 None 2 3 0 FALSE 0 0 NA B coding 579 1737 121 1857 PB.6173.1 chr11 - 2821 12 novel_not_in_catalog TRIM3 novel NA NA NA NA no_subtype TRUE canonical NA NA 138 None 7 4 1 FALSE 0 0 NA C coding 744 2232 176 2407 PB.4837.1 chr8 + 3000 2 full-splice_match SLC25A37 ENST00000520654.1 3018 2 0 18 no_subtype FALSE canonical NA NA 160 None 30 17 0 FALSE 0 0 NA C coding 107 321 95 415 PB.4573.1 chr7 - 1733 1 genic_intron novelGene_929 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4837.3 chr8 + 6611 3 full-splice_match SLC25A37 ENST00000518881.5 3404 3 31 -3238 no_subtype FALSE canonical NA NA 2486 None 21 34 0 FALSE 0 0 NA C coding 187 561 2444 3004 PB.4837.2 chr8 + 2623 1 novel_in_catalog SLC25A37 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 26 13 0 FALSE 0 0 NA C coding 25 75 594 668 PB.4837.4 chr8 + 2779 1 novel_in_catalog SLC25A37 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.61.2 chr1 + 4087 19 full-splice_match MFN2 ENST00000235329.9 4539 19 138 314 no_subtype FALSE canonical NA NA 2388 None 37 7 0 FALSE 0 0 NA C coding 737 2211 245 2455 PB.4837.8 chr8 + 1561 1 incomplete-splice_match SLC25A37 ENST00000519973.5 4823 4 3258 5 no_subtype FALSE canonical NA NA NA None 16 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.61.1 chr1 + 4439 20 novel_in_catalog MFN2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2433 None 7 12 0 FALSE 0 0 NA C coding 737 2211 290 2500 PB.7959.110 chr14 - 1507 6 fusion IGHA1,IGHV1-2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 107 None 4 12 2 TRUE 0 0 NA B coding 467 1401 62 1462 PB.961.4 chr1 + 1829 9 novel_not_in_catalog ELF3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1035 None 5 6 1 FALSE 0 0 NA C coding 280 840 91 930 PB.3384.3 chr5 - 1355 3 novel_not_in_catalog GLRX novel NA NA NA NA no_subtype FALSE canonical NA NA 271 None 41 4 1 FALSE 0 0 NA C coding 106 318 65 382 PB.4026.1 chr6 - 1835 5 full-splice_match AKIRIN2 ENST00000257787.5 1662 5 -31 -142 no_subtype FALSE canonical NA NA 791 None 23 4 0 FALSE 0 0 NA A coding 203 609 557 1165 PB.961.5 chr1 + 2671 6 novel_in_catalog ELF3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1877 None 6 9 0 FALSE 0 0 NA C coding 144 432 509 940 PB.6769.1 chr12 + 1350 6 novel_not_in_catalog CCND2 novel NA NA NA NA no_subtype FALSE canonical NA NA 999 None 6 2 0 TRUE 0 0 NA C coding 289 867 280 1146 PB.5980.2 chr10 + 1782 1 genic_intron novelGene_925 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6769.2 chr12 + 6454 5 full-splice_match CCND2 ENST00000261254.7 6480 5 25 1 no_subtype FALSE canonical NA NA 964 None 8 32 0 FALSE 0 0 NA C coding 289 867 245 1111 PB.6769.5 chr12 + 2780 1 incomplete-splice_match CCND2 ENST00000261254.7 6480 5 3699 2 no_subtype FALSE canonical NA NA NA None 139 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6434.4 chr11 + 3711 2 genic NEAT1_1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2368 None 6 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4550.1 chr7 + 1257 7 full-splice_match PILRA ENST00000198536.6 1316 7 99 -40 no_subtype FALSE canonical NA NA 902 None 15 5 0 FALSE 0 0 NA A coding 303 909 114 1022 PB.9196.1 chr17 + 3051 22 full-splice_match KPNB1 ENST00000290158.8 6139 22 231 2857 no_subtype FALSE canonical NA NA 2806 None 147 0 0 FALSE 0 0 NA A coding 876 2628 177 2804 PB.5384.2 chr9 + 4056 3 novel_not_in_catalog C9orf3 novel NA NA NA NA no_subtype TRUE canonical NA NA 3342 None 6 29 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.9327.6 chr17 + 4278 2 novel_not_in_catalog PRKAR1A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1102 None 2 37 1 TRUE 0 0 NA C coding 114 342 199 540 PB.6657.3 chr11 - 2568 1 antisense novelGene_PAFAH1B2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9327.4 chr17 + 3499 11 full-splice_match PRKAR1A ENST00000589228.5 4256 11 85 672 no_subtype FALSE canonical NA NA 1016 None 372 11 0 FALSE 0 0 NA C coding 381 1143 44 1186 PB.9327.5 chr17 + 2119 2 full-splice_match PRKAR1A ENST00000592194.1 556 2 6 -1569 no_subtype FALSE canonical NA NA 128 None 2 12 0 FALSE 0 0 NA C coding 66 198 135 332 PB.9327.2 chr17 + 3594 12 novel_not_in_catalog PRKAR1A novel NA NA NA NA no_subtype FALSE canonical NA NA 1113 None 2 17 2 TRUE 0 0 NA C coding 381 1143 141 1283 PB.9327.3 chr17 + 3527 11 full-splice_match PRKAR1A ENST00000589228.5 4256 11 56 673 no_subtype FALSE canonical NA NA 1045 None 5 11 0 FALSE 0 0 NA C coding 381 1143 73 1215 PB.1004.6 chr1 + 3559 15 incomplete-splice_match SRGAP2 ENST00000605610.5 3212 20 1100 -1447 internal_fragment FALSE canonical NA NA 1555 None 2 1 0 FALSE 0 0 NA B coding 461 1383 183 1565 PB.9327.1 chr17 + 3633 11 full-splice_match PRKAR1A ENST00000358598.6 3576 11 -62 5 no_subtype FALSE canonical NA NA 1152 None 4 12 0 FALSE 0 0 NA C coding 381 1143 180 1322 PB.8917.1 chr17 - 1238 9 full-splice_match AURKB ENST00000585124.5 1227 9 23 -34 no_subtype FALSE canonical NA NA 46 None 2 1 0 FALSE 0 0 NA A coding 344 1032 72 1103 PB.2469.1 chr3 + 3626 27 full-splice_match ATP2C1 ENST00000505330.5 4888 27 102 1160 no_subtype FALSE canonical NA NA 2855 None 2 2 0 FALSE 0 0 NA C coding 903 2709 275 2983 PB.6434.5 chr11 + 2699 4 genic NEAT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2543 None 2 17 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.5768.21 chr10 - 3386 10 novel_not_in_catalog NCOA4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 88 None 3 26 1 TRUE 0 0 NA C coding 573 1719 169 1887 PB.7959.118 chr14 - 1474 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 98 None 2 12 3 TRUE 0 0 NA B coding 466 1398 32 1429 PB.1247.1 chr2 + 1593 4 full-splice_match FOSL2 ENST00000264716.8 6708 4 771 4344 no_subtype FALSE canonical NA NA 554 None 42 2 0 FALSE 0 0 NA C coding 326 978 93 1070 PB.4034.6 chr6 - 2399 2 genic_intron novelGene_825 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 249 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2175.1 chr3 - 2620 21 full-splice_match SLC26A6 ENST00000395550.6 2589 21 -33 2 no_subtype FALSE canonical NA NA 104 None 6 5 1 FALSE 0 0 NA A coding 759 2277 82 2358 PB.6657.2 chr11 - 3674 20 novel_not_in_catalog PCSK7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 32 None 3 8 1 TRUE 0 0 NA B coding 785 2355 165 2519 PB.4966.1 chr8 + 3719 1 genic_intron novelGene_663 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6967.3 chr12 + 2943 2 novel_not_in_catalog LARP4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 302 None 12 17 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.5450.1 chr9 + 1770 5 full-splice_match SLC31A1 ENST00000374212.4 4744 5 27 2947 no_subtype FALSE canonical NA NA 496 None 28 6 0 FALSE 0 0 NA A coding 190 570 126 695 PB.6089.1 chr10 + 3024 1 antisense novelGene_LINC00959_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A coding 111 333 662 994 PB.7328.3 chr12 - 2420 17 full-splice_match ANAPC5 ENST00000541887.5 2400 17 -22 2 no_subtype TRUE canonical NA NA 277 None 2 1 0 FALSE 0 0 NA C coding 742 2226 71 2296 PB.83.1 chr1 - 2136 3 full-splice_match HSPB7 ENST00000311890.13 2892 3 750 6 no_subtype FALSE canonical NA NA 276 None 2 13 1 FALSE 0 0 NA A coding 170 510 78 587 PB.7957.1 chr14 + 1172 8 full-splice_match CRIP2 ENST00000329146.8 1857 8 671 14 no_subtype FALSE canonical NA NA 601 None 4 1 0 FALSE 0 0 NA A coding 208 624 43 666 PB.7023.1 chr12 - 1220 3 novel_not_in_catalog PYM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 188 None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1930.1 chr2 - 2850 10 novel_not_in_catalog HJURP novel NA NA NA NA no_subtype FALSE canonical NA NA 151 None 8 31 4 TRUE 0 0 NA A coding 717 2151 56 2206 PB.4513.10 chr7 - 5747 5 novel_not_in_catalog SAMD9L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 187 None 6 8 0 TRUE 0 0 NA B coding 1584 4752 684 5435 PB.3219.1 chr5 + 2749 4 novel_not_in_catalog PTGER4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1478 None 78 4 0 TRUE 0 0 NA A coding 488 1464 605 2068 PB.8958.1 chr17 + 3883 24 novel_not_in_catalog LLGL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3563 None 4 8 1 TRUE 0 0 NA A coding 1064 3192 44 3235 PB.3504.2 chr5 - 2700 15 novel_in_catalog CDC23 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 172 None 2 7 0 FALSE 0 0 NA C coding 506 1518 12 1529 PB.3504.1 chr5 - 2615 16 full-splice_match CDC23 ENST00000394886.6 3155 16 20 520 no_subtype FALSE canonical NA NA 172 None 14 7 0 FALSE 0 0 NA C coding 597 1791 12 1802 PB.642.1 chr1 + 2774 18 novel_not_in_catalog PDE4DIP novel NA NA NA NA no_subtype FALSE canonical NA NA 2269 None 2 6 0 TRUE 0 0 NA B coding 740 2220 222 2441 PB.1693.2 chr2 + 2106 1 incomplete-splice_match CYBRD1 ENST00000321348.8 4365 4 2250 10 no_subtype FALSE canonical NA NA NA None 10 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8649.1 chr16 + 3376 1 antisense novelGene_CSNK2A2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 15 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.590.1 chr1 + 1516 1 antisense novelGene_NRAS_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 34 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3239.1 chr5 + 4430 23 novel_not_in_catalog NNT novel NA NA NA NA no_subtype TRUE canonical NA NA 3195 None 12 9 1 TRUE 0 0 NA B coding 1086 3258 85 3342 PB.3239.2 chr5 + 4344 23 novel_not_in_catalog NNT novel NA NA NA NA no_subtype FALSE canonical NA NA 3369 None 2 7 0 TRUE 0 0 NA B coding 1086 3258 259 3516 PB.3239.3 chr5 + 4233 23 novel_not_in_catalog NNT novel NA NA NA NA no_subtype FALSE canonical NA NA 3256 None 35 8 0 TRUE 0 0 NA B coding 1086 3258 146 3403 PB.3239.4 chr5 + 3973 23 novel_not_in_catalog NNT novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3208 None 4 5 1 TRUE 0 0 NA B coding 1086 3258 98 3355 PB.3239.5 chr5 + 3372 1 genic_intron novelGene_433 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.91 chr14 - 1521 10 fusion IGHV3-62,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 125 None 2 9 4 TRUE 0 0 NA B coding 364 1092 385 1476 PB.3931.2 chr6 + 1964 10 novel_in_catalog KLHDC3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1344 None 3 8 0 FALSE 0 0 NA C coding 262 786 187 972 PB.3931.1 chr6 + 1857 11 full-splice_match KLHDC3 ENST00000326974.8 1909 11 40 12 no_subtype FALSE canonical NA NA 1237 None 44 12 0 FALSE 0 0 NA C coding 382 1146 156 1301 PB.1730.1 chr2 + 3012 8 incomplete-splice_match SSFA2 ENST00000409136.5 3610 10 593 5 internal_fragment FALSE canonical NA NA 1839 None 4 7 0 FALSE 0 0 NA A coding 584 1752 72 1823 PB.10492.4 chr20 - 1497 6 novel_not_in_catalog RGS19 novel NA NA NA NA no_subtype FALSE canonical NA NA 224 None 18 7 0 TRUE 0 0 NA B coding 195 585 261 845 PB.10492.5 chr20 - 1405 8 novel_not_in_catalog RGS19 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 27 None 11 10 2 TRUE 0 0 NA B coding 217 651 103 753 PB.10601.1 chr21 - 1488 4 full-splice_match SUMO3 ENST00000332859.10 1807 4 76 243 no_subtype FALSE canonical NA NA 106 None 79 4 0 FALSE 0 0 NA A coding 103 309 86 394 PB.10570.1 chr21 + 2982 1 genic_intron novelGene_395 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4119.1 chr6 + 3066 3 genic_intron novelGene_1104 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1672 None 2 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.11091.1 chrX + 3561 5 novel_not_in_catalog GPRASP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 375 None 6 6 1 FALSE 0 0 NA B coding 838 2514 709 3222 PB.11137.1 chrX + 767 6 full-splice_match MCTS1 ENST00000371317.9 1018 6 154 97 no_subtype FALSE canonical NA NA 567 None 2 0 0 FALSE 0 0 NA A coding 181 543 104 646 PB.2392.1 chr3 - 2741 1 genic_intron novelGene_1020 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4602.18 chr7 - 1756 14 incomplete-splice_match SLC26A3 ENST00000340010.9 2863 21 -13 1120 internal_fragment FALSE canonical NA NA 110 None 2 6 0 FALSE 0 0 NA C coding 519 1557 199 1755 PB.93.5 chr1 + 5923 2 genic_intron novelGene_165 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2530 None 2 35 0 FALSE 0 0 NA A coding 201 603 3460 4062 PB.93.4 chr1 + 3492 21 novel_not_in_catalog ARHGEF10L novel NA NA NA NA no_subtype FALSE canonical NA NA 2475 None 2 5 0 TRUE 0 0 NA B coding 590 1770 50 1819 PB.93.1 chr1 + 4370 32 novel_not_in_catalog ARHGEF10L novel NA NA NA NA no_subtype FALSE canonical NA NA 3359 None 7 8 0 TRUE 0 0 NA B coding 1240 3720 170 3889 PB.93.3 chr1 + 3553 23 novel_not_in_catalog ARHGEF10L novel NA NA NA NA no_subtype FALSE canonical NA NA 2535 None 15 3 0 TRUE 0 0 NA B coding 989 2967 99 3065 PB.10633.2 chr22 - 1561 9 novel_not_in_catalog GNB1L novel NA NA NA NA no_subtype TRUE canonical NA NA 190 None 3 2 0 TRUE 0 0 NA B coding 327 981 308 1288 PB.3916.2 chr6 - 2599 1 novel_in_catalog CCND3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 17 0 FALSE 0 0 NA C coding 255 765 504 1268 PB.906.1 chr1 - 2881 1 antisense novelGene_NPL_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11091.2 chrX + 3501 5 novel_not_in_catalog GPRASP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 309 None 2 7 1 FALSE 0 0 NA B coding 838 2514 643 3156 PB.11236.1 GL000219.1 - 1013 9 novel_not_in_catalog AL592183.1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 227 None 4 3 3 TRUE 0 0 NA A coding 104 312 607 918 PB.530.4 chr1 + 1927 1 incomplete-splice_match PRPF38B ENST00000370025.8 3693 6 1144 623 no_subtype FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3916.1 chr6 - 2626 1 novel_in_catalog CCND3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.530.2 chr1 + 1610 5 novel_not_in_catalog PRPF38B novel NA NA NA NA no_subtype FALSE canonical NA NA 813 None 2 7 0 FALSE 0 0 NA C coding 93 279 254 532 PB.7033.5 chr12 - 4036 28 full-splice_match SMARCC2 ENST00000267064.8 4076 28 33 7 no_subtype FALSE canonical NA NA 165 None 77 1 0 FALSE 0 0 NA C coding 1214 3642 55 3696 PB.6169.1 chr11 - 3034 2 genic PRKCDBP novel NA NA NA NA no_subtype FALSE canonical NA NA 1756 None 6 10 1 TRUE 0 0 NA A coding 191 573 26 598 PB.5198.1 chr9 + 1805 8 novel_in_catalog SMARCA2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 937 None 2 5 0 FALSE 0 0 NA B coding 276 828 143 970 PB.7033.8 chr12 - 4112 29 full-splice_match SMARCC2 ENST00000550164.5 4114 29 -18 20 no_subtype FALSE canonical NA NA 144 None 10 0 0 FALSE 0 0 NA C coding 1245 3735 34 3768 PB.9493.1 chr18 - 3170 18 novel_not_in_catalog AFG3L2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 280 None 15 4 0 TRUE 0 0 NA A coding 799 2397 167 2563 PB.4624.1 chr7 + 2947 3 full-splice_match CAV2 ENST00000222693.4 3301 3 353 1 no_subtype FALSE canonical NA NA 377 None 9 18 0 FALSE 0 0 NA A coding 162 486 40 525 PB.4602.11 chr7 - 3103 22 novel_not_in_catalog SLC26A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 96 None 7 11 1 TRUE 0 0 NA C coding 764 2292 431 2722 PB.2974.4 chr4 - 1629 9 novel_not_in_catalog DNAJB14 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 146 None 2 16 3 TRUE 0 0 NA C coding 370 1110 14 1123 PB.7959.182 chr14 - 1559 11 fusion IGHV1-2,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 106 None 2 17 6 TRUE 0 0 NA B coding 196 588 837 1424 PB.7959.183 chr14 - 1567 10 fusion IGHV4-4,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 18 4 TRUE 0 0 NA B coding 196 588 845 1432 PB.7959.180 chr14 - 1572 9 fusion IGHV3-23,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 124 None 2 8 4 TRUE 0 0 NA B coding 196 588 850 1437 PB.7959.181 chr14 - 1577 8 fusion IGHG1,IGHV3-7,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 3 8 3 TRUE 0 0 NA B coding 196 588 855 1442 PB.9746.1 chr19 - 2835 24 incomplete-splice_match COL5A3 ENST00000264828.3 6174 67 3338 1 5prime_fragment FALSE canonical NA NA 36 None 2 6 0 FALSE 0 0 NA A coding 578 1734 250 1983 PB.10153.2 chr19 + 2847 14 novel_not_in_catalog PPP2R1A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2720 None 3 9 0 TRUE 0 0 NA C coding 554 1662 63 1724 PB.7959.184 chr14 - 1509 8 fusion IGHG1,IGHV3-7,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 118 None 2 10 4 TRUE 0 0 NA B coding 196 588 787 1374 PB.7959.185 chr14 - 1513 12 fusion IGHV2-26,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 60 None 3 10 7 TRUE 0 0 NA B coding 196 588 791 1378 PB.8962.2 chr17 + 6249 4 novel_not_in_catalog SMCR8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5417 None 2 19 2 TRUE 0 0 NA C coding 937 2811 489 3299 PB.7959.188 chr14 - 1507 8 fusion IGHG1,IGHV3-13,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 103 None 3 6 3 TRUE 0 0 NA A coding 196 588 785 1372 PB.8962.1 chr17 + 6042 2 full-splice_match SMCR8 ENST00000406438.4 8279 2 -8 2245 no_subtype FALSE canonical NA NA 2848 None 2 14 0 FALSE 0 0 NA C coding 937 2811 489 3299 PB.11148.2 chrX + 2807 8 novel_not_in_catalog SASH3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1251 None 4 8 0 TRUE 0 0 NA B coding 268 804 148 951 PB.3572.1 chr5 + 3218 12 full-splice_match PPARGC1B ENST00000309241.9 10568 12 28 7322 no_subtype FALSE canonical NA NA 2975 None 12 8 0 FALSE 0 0 NA A coding 1023 3069 5 3073 PB.954.3 chr1 - 1762 5 novel_in_catalog CSRP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 116 None 2 8 0 FALSE 0 0 NA C coding 193 579 5 583 PB.9669.1 chr19 + 3747 1 incomplete-splice_match NFIC ENST00000589123.5 8068 11 4200 122 no_subtype FALSE canonical NA NA NA None 2 32 0 FALSE 0 0 NA C coding 117 351 2805 3155 PB.8655.1 chr16 - 2425 10 full-splice_match GOT2 ENST00000245206.9 2462 10 34 3 no_subtype FALSE canonical NA NA 184 None 15 5 0 FALSE 0 0 NA A coding 430 1290 96 1385 PB.6604.8 chr11 - 2554 10 novel_not_in_catalog CCDC82 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 23 None 2 11 1 TRUE 0 0 NA B coding 521 1563 120 1682 PB.953.1 chr1 - 2240 10 full-splice_match LAD1 ENST00000391967.6 2906 10 284 382 no_subtype FALSE canonical NA NA 56 None 3 5 0 FALSE 0 0 NA A coding 517 1551 19 1569 PB.5432.1 chr9 + 3812 5 novel_not_in_catalog AKAP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 2733 None 2 7 1 TRUE 0 0 NA A coding 859 2577 253 2829 PB.6510.1 chr11 - 4077 31 full-splice_match PDE2A ENST00000444035.6 4193 31 110 6 no_subtype FALSE canonical NA NA 97 None 2 5 0 FALSE 0 0 NA A coding 920 2760 79 2838 PB.7614.6 chr14 + 2399 7 novel_not_in_catalog LRP10 novel NA NA NA NA no_subtype FALSE canonical NA NA 1248 None 2 15 1 TRUE 0 0 NA C coding 231 693 1141 1833 PB.7614.5 chr14 + 2868 9 novel_not_in_catalog LRP10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1728 None 4 9 2 TRUE 0 0 NA C coding 718 2154 160 2313 PB.7614.2 chr14 + 3537 7 novel_not_in_catalog LRP10 novel NA NA NA NA no_subtype FALSE canonical NA NA 2402 None 2 11 1 TRUE 0 0 NA C coding 485 1455 556 2010 PB.7614.1 chr14 + 2825 7 full-splice_match LRP10 ENST00000359591.8 6886 7 559 3502 no_subtype FALSE canonical NA NA 1686 None 304 3 0 FALSE 0 0 NA C coding 713 2139 133 2271 PB.1073.3 chr1 - 1954 1 full-splice_match MIR320B2 ENST00000408479.1 138 1 -1863 47 no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3627.1 chr5 - 3037 6 novel_not_in_catalog CCNJL novel NA NA NA NA no_subtype FALSE canonical NA NA 112 None 4 9 0 FALSE 0 0 NA B coding 386 1158 165 1322 PB.1753.1 chr2 - 2959 9 full-splice_match NEMP2 ENST00000409150.7 6168 9 16 3193 no_subtype FALSE canonical NA NA 148 None 7 12 0 FALSE 0 0 NA A coding 417 1251 52 1302 PB.1938.2 chr2 - 4151 31 novel_not_in_catalog COL6A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 50 None 2 18 2 TRUE 0 0 NA B coding 993 2979 416 3394 PB.9335.1 chr17 - 2874 1 genic_intron novelGene_681 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A coding 103 309 689 997 PB.5707.1 chr10 + 2979 10 full-splice_match BMI1 ENST00000376663.7 3428 10 260 189 no_subtype FALSE canonical NA NA 896 None 15 3 0 FALSE 0 0 NA C coding 326 978 246 1223 PB.5707.2 chr10 + 3007 10 novel_in_catalog BMI1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 738 None 4 3 0 FALSE 0 0 NA C coding 326 978 88 1065 PB.4588.1 chr7 - 3345 16 novel_not_in_catalog PUS7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 196 None 2 19 2 TRUE 0 0 NA A coding 392 1176 932 2107 PB.8322.1 chr15 - 3153 14 novel_not_in_catalog TTC23 novel NA NA NA NA no_subtype TRUE canonical NA NA 113 None 6 11 1 TRUE 0 0 NA A coding 447 1341 134 1474 PB.1011.1 chr1 - 2376 10 novel_not_in_catalog FCMR novel NA NA NA NA no_subtype FALSE canonical NA NA 124 None 111 9 1 TRUE 0 0 NA C coding 390 1170 88 1257 PB.6181.1 chr11 + 2700 3 full-splice_match OLFML1 ENST00000329293.3 2792 3 45 47 no_subtype FALSE canonical NA NA 767 None 15 6 0 FALSE 0 0 NA A coding 402 1206 350 1555 PB.109.1 chr1 - 1627 12 novel_not_in_catalog DDOST novel NA NA NA NA no_subtype FALSE canonical NA NA 203 None 134 7 0 TRUE 0 0 NA B coding 439 1317 50 1366 PB.10031.1 chr19 - 3455 9 full-splice_match CEACAM1 ENST00000161559.10 3519 9 61 3 no_subtype FALSE canonical NA NA 138 None 5 8 0 FALSE 0 0 NA C coding 526 1578 75 1652 PB.2618.1 chr3 - 2555 7 full-splice_match KLHL6 ENST00000341319.7 6298 7 -17 3760 no_subtype FALSE canonical NA NA 346 None 50 5 0 FALSE 0 0 NA A coding 610 1830 87 1916 PB.10031.3 chr19 - 3145 7 full-splice_match CEACAM1 ENST00000403461.5 1263 7 -101 -1781 no_subtype FALSE canonical NA NA 171 None 7 9 0 FALSE 0 0 NA C coding 368 1104 108 1211 PB.10031.2 chr19 - 1628 8 full-splice_match CEACAM1 ENST00000403444.7 3427 8 2 1797 no_subtype FALSE canonical NA NA 166 None 45 5 0 FALSE 0 0 NA C coding 464 1392 103 1494 PB.6520.2 chr11 - 3139 8 full-splice_match RAB6A ENST00000310653.10 3389 8 -9 259 no_subtype FALSE canonical NA NA 581 None 79 11 0 FALSE 0 0 NA C coding 208 624 512 1135 PB.10884.1 chrX - 3756 19 novel_not_in_catalog CTPS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 142 None 6 8 0 FALSE 0 0 NA A coding 586 1758 182 1939 PB.10549.1 chr21 - 2364 3 genic_intron novelGene_340 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 738 None 3 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6520.4 chr11 - 2927 8 full-splice_match RAB6A ENST00000336083.7 3085 8 149 9 no_subtype FALSE canonical NA NA 377 None 14 13 0 FALSE 0 0 NA C coding 208 624 308 931 PB.1562.1 chr2 + 1690 17 full-splice_match MARCO ENST00000327097.4 1838 17 150 -2 no_subtype TRUE canonical NA NA 1414 None 46 1 0 FALSE 0 0 NA A coding 495 1485 61 1545 PB.6755.1 chr12 - 3705 1 antisense novelGene_WNK1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA B coding 128 384 452 835 PB.6755.2 chr12 - 2595 2 antisense novelGene_WNK1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2281 None 2 26 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.4168.1 chr6 - 1646 8 novel_not_in_catalog FUCA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 249 None 62 2 0 TRUE 0 0 NA B coding 467 1401 26 1426 PB.6990.1 chr12 + 1645 2 novel_not_in_catalog ZNF740 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 249 None 2 9 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.5568.8 chr9 - 1912 14 novel_in_catalog FNBP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 267 None 25 0 0 FALSE 0 0 NA B coding 555 1665 244 1908 PB.3007.1 chr4 + 2696 6 novel_not_in_catalog ALPK1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2449 None 2 10 0 TRUE 0 0 NA B coding 230 690 330 1019 PB.4619.1 chr7 + 4240 16 novel_not_in_catalog FOXP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2095 None 2 9 1 TRUE 0 0 NA A coding 621 1863 375 2237 PB.2326.1 chr3 + 2813 1 full-splice_match HNRNPKP4 ENST00000485383.1 1386 1 -109 -1318 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A coding 223 669 834 1502 PB.5379.1 chr9 + 2071 2 genic RP11-2B6.2 novel NA NA NA NA no_subtype FALSE canonical NA NA 788 None 2 32 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1073.1 chr1 - 2857 24 novel_not_in_catalog NVL novel NA NA NA NA no_subtype FALSE canonical NA NA 88 None 31 7 0 TRUE 0 0 NA A coding 856 2568 32 2599 PB.6636.1 chr11 + 2150 1 antisense novelGene_RDX_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6998.13 chr12 + 1426 13 full-splice_match PCBP2 ENST00000437231.5 3026 13 3 1597 no_subtype FALSE canonical NA NA 1267 None 4 5 0 FALSE 0 0 NA C coding 318 954 348 1301 PB.6998.12 chr12 + 1486 13 novel_in_catalog PCBP2 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 1279 None 7 4 1 FALSE 0 0 NA C coding 322 966 348 1313 PB.6998.11 chr12 + 1799 15 full-splice_match PCBP2 ENST00000552296.6 1342 15 -263 -194 no_subtype FALSE canonical NA NA 1396 None 28 3 0 FALSE 0 0 NA C coding 361 1083 348 1430 PB.6335.1 chr11 + 1650 8 full-splice_match TMX2 ENST00000278422.8 1631 8 -23 4 no_subtype FALSE canonical NA NA 779 None 12 7 0 FALSE 0 0 NA C coding 296 888 36 923 PB.6998.17 chr12 + 1583 15 novel_not_in_catalog PCBP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1375 None 2 7 1 FALSE 0 0 NA C coding 354 1062 348 1409 PB.4829.1 chr8 + 3663 21 novel_not_in_catalog CCAR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2840 None 32 5 1 FALSE 0 0 NA B coding 365 1095 1788 2882 PB.4829.2 chr8 + 3725 21 novel_not_in_catalog CCAR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2900 None 61 7 2 FALSE 0 0 NA B coding 365 1095 1848 2942 PB.3927.1 chr6 + 1476 9 novel_not_in_catalog RPL7L1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1092 None 29 8 2 TRUE 0 0 NA A coding 246 738 13 750 PB.2962.4 chr4 + 1427 1 genic_intron novelGene_863 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6998.19 chr12 + 1567 14 novel_in_catalog PCBP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1360 None 8 5 1 FALSE 0 0 NA C coding 349 1047 348 1394 PB.6998.18 chr12 + 1523 14 full-splice_match PCBP2 ENST00000359282.9 1730 14 3 204 no_subtype FALSE canonical NA NA 1306 None 9 5 2 FALSE 0 0 NA C coding 331 993 348 1340 PB.10244.1 chr20 + 3151 13 full-splice_match HSPA12B ENST00000254963.6 3151 13 -10 10 no_subtype FALSE canonical NA NA 1560 None 10 10 0 FALSE 0 0 NA A coding 686 2058 156 2213 PB.8013.1 chr15 - 1494 5 full-splice_match NDUFAF1 ENST00000260361.8 1461 5 -44 11 no_subtype FALSE canonical NA NA 345 None 8 3 0 FALSE 0 0 NA A coding 327 981 427 1407 PB.4103.1 chr6 - 2852 13 full-splice_match CEP85L ENST00000368491.7 7673 13 362 4459 no_subtype FALSE canonical NA NA 333 None 7 4 0 FALSE 0 0 NA C coding 805 2415 261 2675 PB.4103.3 chr6 - 1394 1 genic_intron novelGene_1043 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4103.2 chr6 - 1972 8 incomplete-splice_match CEP85L ENST00000368491.7 7673 13 354 5347 internal_fragment FALSE canonical NA NA 341 None 2 1 0 FALSE 0 0 NA C coding 568 1704 269 1972 PB.4590.1 chr7 - 2602 5 novel_not_in_catalog ATXN7L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 110 None 2 14 1 TRUE 0 0 NA A coding 118 354 14 367 PB.2247.1 chr3 + 2795 22 full-splice_match ITIH3 ENST00000449956.2 3007 22 -4 216 no_subtype TRUE canonical NA NA 2553 None 9 2 0 FALSE 0 0 NA A coding 890 2670 11 2680 PB.6528.1 chr11 - 1602 1 antisense novelGene_POLD3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5764.1 chr10 - 3191 2 novel_not_in_catalog MARCH8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2806 None 8 15 1 TRUE 0 0 NA A coding 92 276 19 294 PB.1743.1 chr2 + 2677 1 antisense novelGene_SLC40A1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5969.1 chr10 + 4028 1 incomplete-splice_match SCD ENST00000370355.2 5362 6 1324 11 no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A coding 119 357 1797 2153 PB.3882.1 chr6 + 2856 8 full-splice_match KCTD20 ENST00000373731.6 5619 8 271 2492 no_subtype TRUE canonical NA NA 1087 None 26 9 0 FALSE 0 0 NA C coding 419 1257 121 1377 PB.3093.8 chr4 - 1463 1 genic_intron novelGene_1251 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3882.3 chr6 + 4275 9 novel_not_in_catalog KCTD20 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4147 None 2 29 1 TRUE 0 0 NA C coding 419 1257 113 1369 PB.2189.1 chr3 - 5601 34 novel_not_in_catalog LAMB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 38 None 2 2 0 TRUE 0 0 NA A coding 1798 5394 95 5488 PB.3643.2 chr5 + 1297 11 full-splice_match NPM1 ENST00000296930.9 1758 11 206 255 no_subtype FALSE canonical NA NA 941 None 126 3 0 FALSE 0 0 NA C coding 288 864 114 977 PB.6317.1 chr11 - 2354 4 full-splice_match KBTBD4 ENST00000430070.6 2372 4 46 -28 no_subtype FALSE canonical NA NA 37 None 2 1 0 FALSE 0 0 NA A coding 534 1602 19 1620 PB.4347.3 chr7 - 1677 13 novel_not_in_catalog CPVL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 108 None 4 1 0 TRUE 0 0 NA C coding 446 1338 131 1468 PB.4347.2 chr7 - 1601 13 novel_not_in_catalog CPVL novel NA NA NA NA no_subtype FALSE canonical NA NA 122 None 13 1 1 FALSE 0 0 NA C coding 472 1416 145 1560 PB.4347.1 chr7 - 1673 13 full-splice_match CPVL ENST00000265394.9 2091 13 2 416 no_subtype FALSE canonical NA NA 107 None 50 2 0 FALSE 0 0 NA C coding 472 1416 130 1545 PB.5495.4 chr9 + 2559 10 full-splice_match NEK6 ENST00000546191.5 2580 10 19 2 no_subtype FALSE canonical NA NA 959 None 2 9 1 FALSE 0 0 NA C coding 313 939 129 1067 PB.1983.5 chr3 + 2705 1 novel_in_catalog MTMR14 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 25 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1983.2 chr3 + 2416 19 full-splice_match MTMR14 ENST00000296003.8 2494 19 45 33 no_subtype FALSE canonical NA NA 1846 None 7 3 0 FALSE 0 0 NA C coding 650 1950 78 2027 PB.7879.1 chr14 + 864 2 full-splice_match TMEM251 ENST00000283534.4 909 2 41 4 no_subtype FALSE canonical NA NA 41 None 2 2 0 FALSE 0 0 NA A coding 131 393 58 450 PB.3387.1 chr5 + 1710 2 genic_intron novelGene_880 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 37 None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1983.1 chr3 + 2806 20 novel_not_in_catalog MTMR14 novel NA NA NA NA no_subtype TRUE canonical NA NA 2211 None 2 12 0 TRUE 0 0 NA C coding 590 1770 117 1886 PB.2771.2 chr4 - 2676 14 full-splice_match DHX15 ENST00000336812.4 2994 14 41 277 no_subtype FALSE canonical NA NA 187 None 182 0 0 FALSE 0 0 NA C coding 795 2385 117 2501 PB.2771.1 chr4 - 3634 16 novel_not_in_catalog DHX15 novel NA NA NA NA no_subtype TRUE canonical NA NA 200 None 3 11 1 TRUE 0 0 NA C coding 795 2385 130 2514 PB.10549.2 chr21 - 1596 2 genic_intron novelGene_340 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1366 None 2 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8288.1 chr15 + 3749 15 full-splice_match SEMA4B ENST00000332496.10 3781 15 -7 39 no_subtype TRUE canonical NA NA 2021 None 5 8 0 FALSE 0 0 NA C coding 837 2511 248 2758 PB.3083.1 chr4 + 2874 1 genic_intron novelGene_1239 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8288.3 chr15 + 2160 1 full-splice_match RPS12P26 ENST00000492017.3 396 1 -483 -1281 no_subtype FALSE canonical NA NA NA None 4 13 0 FALSE 0 0 NA A coding 11 33 343 375 PB.8288.2 chr15 + 3514 14 full-splice_match SEMA4B ENST00000411539.6 3807 14 249 44 no_subtype FALSE canonical NA NA 1785 None 17 8 0 FALSE 0 0 NA C coding 832 2496 27 2522 PB.8288.4 chr15 + 3371 13 novel_in_catalog SEMA4B novel NA NA NA NA no_combination_of_known_junctions TRUE canonical NA NA 1643 None 2 29 0 FALSE 0 0 NA C coding 535 1605 52 1656 PB.8288.7 chr15 + 3494 2 genic SEMA4B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 320 None 2 16 0 TRUE 0 0 NA C coding 252 756 1388 2143 PB.3804.2 chr6 - 1641 11 full-splice_match DDX39B ENST00000396172.5 2133 11 448 44 no_subtype FALSE canonical NA NA 51 None 53 0 0 FALSE 0 0 NA C coding 428 1284 184 1467 PB.3804.3 chr6 - 3968 10 full-splice_match DDX39B ENST00000462256.5 4027 10 25 34 no_subtype FALSE canonical NA NA 43 None 2 10 0 FALSE 0 0 NA C coding 290 870 46 915 PB.3804.1 chr6 - 4156 10 novel_in_catalog DDX39B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 102 None 25 11 0 FALSE 0 0 NA C coding 290 870 235 1104 PB.6839.1 chr12 + 1791 2 full-splice_match GPRC5A ENST00000537783.1 1740 2 6 -57 no_subtype FALSE canonical NA NA 100 None 2 3 0 FALSE 0 0 NA C coding 343 1029 108 1136 PB.3804.7 chr6 - 2882 1 novel_in_catalog DDX39B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6839.2 chr12 + 1807 3 novel_not_in_catalog GPRC5A novel NA NA NA NA no_subtype FALSE canonical NA NA 603 None 2 9 0 FALSE 0 0 NA C coding 199 597 91 687 PB.7922.1 chr14 - 1935 11 full-splice_match WARS ENST00000355338.6 3092 11 495 662 no_subtype FALSE canonical NA NA 51 None 94 5 1 FALSE 0 0 NA C coding 471 1413 125 1537 PB.10236.6 chr20 + 2896 22 novel_not_in_catalog VPS16 novel NA NA NA NA no_subtype FALSE canonical NA NA 2596 None 4 6 1 FALSE 0 0 NA C coding 585 1755 47 1801 PB.3558.4 chr5 - 1607 4 incomplete-splice_match NR3C1 ENST00000503201.1 2594 9 43 944 internal_fragment FALSE canonical NA NA 126 None 17 1 0 FALSE 0 0 NA C coding 489 1467 140 1606 PB.3558.6 chr5 - 1510 4 incomplete-splice_match NR3C1 ENST00000415690.6 3789 9 90 2189 internal_fragment FALSE canonical NA NA 29 None 2 0 0 FALSE 0 0 NA C coding 489 1467 43 1509 PB.5961.1 chr10 - 3777 1 novel_in_catalog GOT1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5.1 chr1 - 1267 7 full-splice_match UBE2J2 ENST00000349431.10 1733 7 32 434 no_subtype FALSE canonical NA NA 188 None 3 3 0 FALSE 0 0 NA A coding 259 777 189 965 PB.1533.1 chr2 + 1371 7 novel_not_in_catalog CD8BP novel NA NA NA NA no_subtype FALSE canonical NA NA 641 None 40 1 0 TRUE 0 0 NA B coding 210 630 22 651 PB.3558.2 chr5 - 6137 9 full-splice_match NR3C1 ENST00000503201.1 2594 9 78 -3621 no_subtype FALSE canonical NA NA 91 None 2 21 0 FALSE 0 0 NA C coding 777 2331 105 2435 PB.5305.1 chr9 - 2926 1 novel_in_catalog SLC25A51 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3425.1 chr5 - 3754 3 full-splice_match FEM1C ENST00000274457.4 5816 3 222 1840 no_subtype FALSE canonical NA NA 150 None 4 7 0 FALSE 0 0 NA A coding 617 1851 341 2191 PB.8728.1 chr16 + 1919 1 antisense novelGene_PHLPP2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2463.2 chr3 - 2908 7 novel_not_in_catalog CNBP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 111 None 17 13 1 TRUE 0 0 NA B coding 177 531 126 656 PB.981.2 chr1 + 1064 1 genic_intron novelGene_1381 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 1 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8003.1 chr15 + 3133 3 novel_not_in_catalog GCHFR novel NA NA NA NA no_subtype FALSE non_canonical NA NA 272 None 3 17 0 TRUE 0 0 NA A coding 175 525 1187 1711 PB.11214.6 chrX - 3496 11 novel_not_in_catalog G6PD novel NA NA NA NA no_subtype FALSE canonical NA NA 55 None 3 11 2 TRUE 0 0 NA B coding 162 486 64 549 PB.9641.3 chr19 + 3120 8 novel_not_in_catalog CIRBP novel NA NA NA NA no_subtype FALSE canonical NA NA 2964 None 2 26 1 FALSE 0 0 NA C coding 293 879 86 964 PB.9641.2 chr19 + 3133 8 novel_not_in_catalog CIRBP novel NA NA NA NA no_subtype FALSE canonical NA NA 2977 None 97 16 0 FALSE 0 0 NA C coding 143 429 83 511 PB.9641.1 chr19 + 1323 8 novel_in_catalog CIRBP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 584 None 11 6 0 FALSE 0 0 NA C coding 172 516 83 598 PB.3876.2 chr6 + 3419 14 novel_not_in_catalog MAPK14 novel NA NA NA NA no_subtype FALSE canonical NA NA 1047 None 3 15 0 TRUE 0 0 NA B coding 283 849 264 1112 PB.9641.7 chr19 + 2537 8 novel_in_catalog CIRBP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2382 None 2 9 0 FALSE 0 0 NA C coding 297 891 83 973 PB.9641.6 chr19 + 1702 6 full-splice_match CIRBP ENST00000587896.5 1081 6 -2 -619 no_subtype FALSE canonical NA NA 513 None 2 8 0 FALSE 0 0 NA C coding 297 891 83 973 PB.9641.5 chr19 + 2541 9 novel_in_catalog CIRBP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2385 None 2 9 0 FALSE 0 0 NA C coding 297 891 86 976 PB.9641.4 chr19 + 2165 10 novel_in_catalog CIRBP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2010 None 3 8 0 FALSE 0 0 NA C coding 172 516 86 601 PB.3058.1 chr4 - 3990 15 incomplete-splice_match TBC1D9 ENST00000442267.2 5306 21 1294 22 5prime_fragment TRUE canonical NA NA 47 None 2 7 0 FALSE 0 0 NA A coding 803 2409 171 2579 PB.9641.9 chr19 + 3148 8 novel_not_in_catalog CIRBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2992 None 3 20 1 TRUE 0 0 NA C coding 148 444 83 526 PB.9641.8 chr19 + 3321 8 novel_not_in_catalog CIRBP novel NA NA NA NA no_subtype FALSE canonical NA NA 3129 None 3 36 1 TRUE 0 0 NA C coding 297 891 83 973 PB.6728.2 chr11 + 1723 11 full-splice_match ST3GAL4 ENST00000444328.6 1812 11 84 5 no_subtype FALSE canonical NA NA 1050 None 2 1 0 FALSE 0 0 NA C coding 333 999 136 1134 PB.1917.1 chr2 + 1197 5 full-splice_match PTMA ENST00000409115.7 1221 5 17 7 no_subtype FALSE canonical NA NA 466 None 159 4 0 FALSE 0 0 NA C coding 110 330 182 511 PB.2458.2 chr3 + 2739 5 novel_in_catalog RAB7A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1682 None 6 9 0 FALSE 0 0 NA C coding 220 660 203 862 PB.2458.3 chr3 + 3088 3 genic_intron novelGene_1114 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 547 None 2 32 0 FALSE 0 0 NA A coding 105 315 194 508 PB.7978.1 chr15 + 4718 13 novel_not_in_catalog ARHGAP11A novel NA NA NA NA no_subtype FALSE canonical NA NA 4053 None 2 21 2 TRUE 0 0 NA A coding 1023 3069 737 3805 PB.2534.1 chr3 + 2856 3 full-splice_match EIF2A ENST00000463863.5 565 3 101 -2392 no_subtype FALSE canonical NA NA 122 None 4 23 0 FALSE 0 0 NA C coding 95 285 25 309 PB.2463.8 chr3 - 1540 5 novel_in_catalog CNBP novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 135 None 125 4 0 FALSE 0 0 NA B coding 172 516 150 665 PB.7553.3 chr13 + 3351 2 antisense novelGene_GPR18_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 2582 None 4 23 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2073.2 chr3 + 2702 16 full-splice_match STT3B ENST00000295770.3 4248 16 157 1389 no_subtype FALSE canonical NA NA 2452 None 7 3 0 FALSE 0 0 NA C coding 826 2478 53 2530 PB.8581.1 chr16 + 1779 11 full-splice_match TGFB1I1 ENST00000394863.7 1898 11 116 3 no_subtype FALSE canonical NA NA 1133 None 27 4 1 FALSE 0 0 NA A coding 461 1383 15 1397 PB.5610.2 chr9 - 3112 13 novel_not_in_catalog BRD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 112 None 33 4 0 TRUE 0 0 NA B coding 726 2178 226 2403 PB.9605.1 chr18 + 5716 10 novel_not_in_catalog ZNF407 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5574 None 2 8 1 TRUE 0 0 NA A coding 1500 4500 79 4578 PB.8720.2 chr16 - 2795 19 full-splice_match COG4 ENST00000323786.9 2833 19 26 12 no_subtype FALSE canonical NA NA 167 None 36 2 0 FALSE 0 0 NA C coding 785 2355 9 2363 PB.8720.1 chr16 - 2886 20 novel_not_in_catalog COG4 novel NA NA NA NA no_subtype FALSE canonical NA NA 167 None 2 3 0 TRUE 0 0 NA C coding 813 2439 9 2447 PB.9904.11 chr19 - 2579 18 incomplete-splice_match ATP13A1 ENST00000291503.9 3483 26 899 5 5prime_fragment FALSE canonical NA NA 16 None 4 1 0 FALSE 0 0 NA B coding 692 2076 284 2359 PB.9904.10 chr19 - 2810 21 novel_in_catalog ATP13A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 24 None 2 20 5 FALSE 0 0 NA B coding 572 1716 875 2590 PB.2962.1 chr4 + 2688 13 full-splice_match PDLIM5 ENST00000317968.8 6083 13 35 3360 no_subtype FALSE canonical NA NA 1802 None 27 5 0 FALSE 0 0 NA C coding 596 1788 102 1889 PB.10733.1 chr22 - 1871 15 full-splice_match EIF3D ENST00000216190.12 2155 15 273 11 no_subtype TRUE canonical NA NA 88 None 73 1 0 FALSE 0 0 NA C coding 548 1644 99 1742 PB.10045.2 chr19 + 2701 10 fusion PVR,CEACAM19 novel NA NA NA NA no_subtype FALSE canonical NA NA 2115 None 4 31 1 TRUE 0 0 NA A coding 405 1215 184 1398 PB.10733.3 chr22 - 1946 16 novel_in_catalog EIF3D novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 88 None 2 1 0 FALSE 0 0 NA C coding 548 1644 185 1828 PB.5670.2 chr10 + 3425 12 novel_not_in_catalog ATP5C1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2196 None 2 28 5 TRUE 0 0 NA C coding 297 891 29 919 PB.5670.1 chr10 + 1093 10 full-splice_match ATP5C1 ENST00000356708.11 1163 10 46 24 no_subtype TRUE canonical NA NA 960 None 13 1 0 FALSE 0 0 NA C coding 298 894 34 927 PB.6825.1 chr12 + 1836 4 full-splice_match GABARAPL1 ENST00000266458.9 1957 4 112 9 no_subtype FALSE canonical NA NA 501 None 8 5 0 FALSE 0 0 NA A coding 117 351 214 564 PB.10158.1 chr19 - 3410 5 full-splice_match ZNF347 ENST00000334197.11 7960 5 -22 4572 no_subtype FALSE canonical NA NA 45 None 4 5 1 FALSE 0 0 NA A coding 839 2517 92 2608 PB.6973.1 chr12 - 1431 1 antisense novelGene_METTL7A_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7902.1 chr14 + 2138 2 antisense novelGene_BCL11B_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 20 None 2 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7902.2 chr14 + 1441 1 antisense novelGene_BCL11B_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.40.1 chr1 - 2987 4 full-splice_match ERRFI1 ENST00000377482.9 3104 4 105 12 no_subtype FALSE canonical NA NA 46 None 31 4 0 FALSE 0 0 NA A coding 462 1386 120 1505 PB.2713.3 chr4 + 3394 1 novel_in_catalog RNF4 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 21 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2713.1 chr4 + 2653 8 full-splice_match RNF4 ENST00000502316.5 855 8 37 -1835 no_subtype FALSE canonical NA NA 676 None 292 10 0 FALSE 0 0 NA C coding 190 570 254 823 PB.2713.4 chr4 + 2763 7 novel_in_catalog RNF4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 583 None 2 12 0 FALSE 0 0 NA C coding 190 570 161 730 PB.2713.5 chr4 + 5610 8 novel_not_in_catalog RNF4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3430 None 3 29 3 TRUE 0 0 NA C coding 116 348 3753 4100 PB.3431.2 chr5 - 3560 3 genic_intron novelGene_1031 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 252 None 2 39 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.8887.1 chr17 - 1400 9 novel_not_in_catalog CLEC10A novel NA NA NA NA no_subtype FALSE canonical NA NA 242 None 39 6 2 FALSE 0 0 NA A coding 289 867 276 1142 PB.3431.1 chr5 - 4212 20 novel_not_in_catalog SEMA6A novel NA NA NA NA no_subtype FALSE canonical NA NA 586 None 3 13 0 TRUE 0 0 NA A coding 1030 3090 625 3714 PB.175.1 chr1 + 1306 1 full-splice_match SFN ENST00000339276.5 1320 1 11 3 no_subtype FALSE canonical NA NA NA None 4 4 0 FALSE 0 0 NA A coding 248 744 65 808 PB.3017.1 chr4 + 2702 3 novel_not_in_catalog SYNPO2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1716 None 2 18 1 TRUE 0 0 NA B coding 135 405 567 971 PB.5882.2 chr10 + 2443 8 incomplete-splice_match CCSER2 ENST00000372088.6 7657 10 1 5213 3prime_fragment FALSE canonical NA NA 2406 None 3 0 0 FALSE 0 0 NA B coding 728 2184 259 2442 PB.10829.1 chr22 + 1637 11 full-splice_match TRMU ENST00000290846.8 1940 11 296 7 no_subtype FALSE canonical NA NA 1145 None 2 4 0 FALSE 0 0 NA A coding 421 1263 45 1307 PB.9673.1 chr19 - 2366 3 full-splice_match TBXA2R ENST00000375190.8 2608 3 -28 270 no_subtype FALSE canonical NA NA 339 None 3 8 0 FALSE 0 0 NA A coding 343 1029 423 1451 PB.6042.1 chr10 - 2987 4 antisense novelGene_TRUB1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2708 None 16 22 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5858.2 chr10 + 3699 6 novel_in_catalog SAMD8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1081 None 5 29 0 FALSE 0 0 NA C coding 415 1245 139 1383 PB.10503.2 chr21 - 1877 9 novel_not_in_catalog SAMSN1 novel NA NA NA NA no_subtype TRUE canonical NA NA 131 None 13 5 0 TRUE 0 0 NA A coding 373 1119 75 1193 PB.5541.2 chr9 + 2941 14 novel_not_in_catalog SLC27A4 novel NA NA NA NA no_subtype FALSE canonical NA NA 2053 None 15 5 1 FALSE 0 0 NA B coding 643 1929 280 2208 PB.5812.1 chr10 + 3503 7 genic VPS26A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2919 None 4 30 5 TRUE 0 0 NA B non_coding NA NA NA NA PB.5812.3 chr10 + 2412 1 genic_intron novelGene_657 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5812.2 chr10 + 1208 3 full-splice_match SRGN ENST00000242465.3 1208 3 -6 6 no_subtype FALSE canonical NA NA 273 None 33 8 1 FALSE 0 0 NA A coding 157 471 50 520 PB.1654.1 chr2 - 1467 8 full-splice_match CYTIP ENST00000264192.7 2260 8 84 709 no_subtype FALSE canonical NA NA 212 None 28 3 0 FALSE 0 0 NA C coding 359 1077 39 1115 PB.3276.1 chr5 - 2618 1 incomplete-splice_match ELOVL7 ENST00000425382.5 3827 8 1203 7 no_subtype FALSE canonical NA NA NA None 4 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5903.1 chr10 + 1732 2 full-splice_match IFIT1 ENST00000371804.3 1880 2 140 8 no_subtype FALSE canonical NA NA 32 None 77 3 0 FALSE 0 0 NA A coding 478 1434 28 1461 PB.9272.1 chr17 + 3236 1 novel_in_catalog VMP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 25 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1421.2 chr2 + 3144 2 novel_not_in_catalog ACTG2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1718 None 21 12 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.9272.3 chr17 + 2227 1 full-splice_match VMP1 ENST00000592790.1 4325 1 71 2027 no_subtype FALSE canonical NA NA NA None 4 14 0 FALSE 0 0 NA C coding 124 372 934 1305 PB.9272.2 chr17 + 1983 12 full-splice_match VMP1 ENST00000262291.8 2712 12 225 504 no_subtype FALSE canonical NA NA 1162 None 30 1 0 FALSE 0 0 NA C coding 406 1218 86 1303 PB.2962.3 chr4 + 2791 1 genic_intron novelGene_862 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10182.1 chr19 + 3020 4 full-splice_match ZNF805 ENST00000414468.2 1884 4 -206 -930 no_subtype FALSE canonical NA NA 459 None 6 16 0 FALSE 0 0 NA A coding 625 1875 213 2087 PB.5678.1 chr10 - 3437 4 novel_not_in_catalog UPF2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 204 None 3 19 3 TRUE 0 0 NA A coding 113 339 1213 1551 PB.7141.1 chr12 + 3267 15 novel_not_in_catalog TMTC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2138 None 2 3 0 TRUE 0 0 NA B coding 914 2742 206 2947 PB.10527.1 chr21 - 4015 20 full-splice_match SCAF4 ENST00000399804.5 4127 20 -43 155 no_subtype FALSE canonical NA NA 456 None 2 13 0 FALSE 0 0 NA C coding 1125 3375 427 3801 PB.2570.1 chr3 - 1626 2 genic_intron novelGene_1297 novel NA NA NA NA no_subtype FALSE canonical NA NA 457 None 2 5 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7307.12 chr12 - 3761 12 full-splice_match PXN ENST00000228307.11 3785 12 16 8 no_subtype FALSE canonical NA NA 139 None 29 10 0 FALSE 0 0 NA C coding 591 1773 127 1899 PB.10527.2 chr21 - 3891 20 full-splice_match SCAF4 ENST00000286835.11 4193 20 94 208 no_subtype FALSE canonical NA NA 319 None 2 8 0 FALSE 0 0 NA C coding 1147 3441 290 3730 PB.5836.3 chr10 + 1792 3 novel_not_in_catalog DDIT4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 460 None 2 15 1 TRUE 0 0 NA C coding 232 696 256 951 PB.5836.2 chr10 + 1664 3 full-splice_match DDIT4 ENST00000307365.3 1748 3 75 9 no_subtype FALSE canonical NA NA 331 None 31 6 0 FALSE 0 0 NA C coding 232 696 127 822 PB.5836.1 chr10 + 1791 2 full-splice_match DDIT4 ENST00000473155.1 753 2 40 -1078 no_subtype FALSE canonical NA NA 457 None 22 7 0 FALSE 0 0 NA C coding 232 696 253 948 PB.9395.2 chr17 + 2557 14 novel_not_in_catalog MFSD11 novel NA NA NA NA no_subtype TRUE canonical NA NA 1491 None 3 9 1 TRUE 0 0 NA C coding 449 1347 307 1653 PB.9141.2 chr17 - 4601 20 novel_in_catalog EZH1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 92 None 2 14 1 FALSE 0 0 NA A coding 747 2241 104 2344 PB.10370.3 chr20 - 2896 2 novel_in_catalog TTI1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2345 None 4 2 0 FALSE 0 0 NA C coding 841 2523 44 2566 PB.10370.1 chr20 - 3793 8 full-splice_match TTI1 ENST00000373447.7 3825 8 8 24 no_subtype FALSE canonical NA NA 57 None 63 11 0 FALSE 0 0 NA C coding 1089 3267 99 3365 PB.5606.2 chr9 - 3052 9 novel_in_catalog SLC2A6 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 841 None 5 6 1 FALSE 0 0 NA B coding 301 903 1209 2111 PB.5606.3 chr9 - 2839 10 novel_not_in_catalog SLC2A6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 127 None 19 6 0 FALSE 0 0 NA B coding 301 903 1000 1902 PB.5606.4 chr9 - 3114 9 novel_not_in_catalog SLC2A6 novel NA NA NA NA no_subtype FALSE canonical NA NA 127 None 2 10 0 FALSE 0 0 NA B coding 226 678 1499 2176 PB.5606.5 chr9 - 2769 10 novel_not_in_catalog SLC2A6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 129 None 2 14 1 FALSE 0 0 NA B coding 223 669 38 706 PB.4064.1 chr6 - 1467 2 genic_intron novelGene_976 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1445 None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7339.1 chr12 - 2568 15 novel_not_in_catalog VPS33A novel NA NA NA NA no_subtype TRUE canonical NA NA 199 None 5 3 0 TRUE 0 0 NA B coding 596 1788 98 1885 PB.10723.1 chr22 + 1407 6 incomplete-splice_match HMGXB4 ENST00000418170.5 4216 12 5 2804 3prime_fragment FALSE canonical NA NA 508 None 2 0 0 FALSE 0 0 NA A coding 277 831 577 1407 PB.2414.1 chr3 - 2032 14 full-splice_match HCLS1 ENST00000314583.7 2000 14 -36 4 no_subtype FALSE canonical NA NA 128 None 143 4 1 FALSE 0 0 NA A coding 486 1458 129 1586 PB.8341.9 chr16 + 3034 14 novel_not_in_catalog FAM234A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1726 None 3 20 3 TRUE 0 0 NA C coding 472 1416 520 1935 PB.8341.8 chr16 + 3240 12 novel_not_in_catalog FAM234A novel NA NA NA NA no_subtype FALSE canonical NA NA 1968 None 3 19 1 TRUE 0 0 NA C coding 221 663 1515 2177 PB.8341.5 chr16 + 3367 13 novel_not_in_catalog FAM234A novel NA NA NA NA no_subtype FALSE canonical NA NA 2059 None 2 22 1 TRUE 0 0 NA C coding 221 663 1606 2268 PB.8341.4 chr16 + 3137 17 novel_not_in_catalog FAM234A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1864 None 2 15 3 TRUE 0 0 NA C coding 472 1416 658 2073 PB.8341.7 chr16 + 1839 13 novel_not_in_catalog FAM234A novel NA NA NA NA no_subtype FALSE canonical NA NA 1686 None 2 1 0 FALSE 0 0 NA C coding 471 1413 382 1794 PB.7829.2 chr14 + 1583 11 novel_not_in_catalog GPATCH2L novel NA NA NA NA no_subtype FALSE canonical NA NA 1346 None 2 1 0 TRUE 0 0 NA B coding 472 1416 59 1474 PB.8341.1 chr16 + 2950 13 full-splice_match FAM234A ENST00000399932.7 3213 13 256 7 no_subtype FALSE canonical NA NA 1642 None 11 11 0 FALSE 0 0 NA C coding 472 1416 436 1851 PB.7374.1 chr12 + 2759 1 incomplete-splice_match FBRSL1 ENST00000542061.2 3175 4 409 8 no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA A coding 115 345 913 1257 PB.8341.3 chr16 + 3026 16 novel_not_in_catalog FAM234A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1753 None 2 13 3 TRUE 0 0 NA C coding 472 1416 547 1962 PB.8341.2 chr16 + 2975 14 novel_not_in_catalog FAM234A novel NA NA NA NA no_subtype FALSE canonical NA NA 1704 None 40 9 0 FALSE 0 0 NA C coding 472 1416 498 1913 PB.6074.1 chr10 - 2105 12 novel_not_in_catalog OAT novel NA NA NA NA no_subtype FALSE canonical NA NA 49 None 32 7 1 TRUE 0 0 NA A coding 439 1317 166 1482 PB.583.2 chr1 - 3523 22 novel_not_in_catalog PTPN22 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 165 None 2 11 2 TRUE 0 0 NA B coding 413 1239 1203 2441 PB.4908.1 chr8 + 4173 21 novel_not_in_catalog HGSNAT novel NA NA NA NA no_subtype TRUE canonical NA NA 2929 None 7 17 1 TRUE 0 0 NA A coding 635 1905 24 1928 PB.7597.1 chr14 + 1400 2 full-splice_match RNASE4 ENST00000555835.2 2520 2 491 629 no_subtype FALSE canonical NA NA 168 None 85 5 0 FALSE 0 0 NA A coding 147 441 186 626 PB.9657.1 chr19 - 1644 3 full-splice_match TIMM13 ENST00000215570.7 1973 3 303 26 no_subtype FALSE canonical NA NA 178 None 6 11 0 FALSE 0 0 NA A coding 64 192 412 603 PB.2845.1 chr4 - 2209 6 full-splice_match CHIC2 ENST00000263921.7 1194 6 61 -1076 no_subtype FALSE canonical NA NA 448 None 9 8 0 FALSE 0 0 NA C coding 165 495 330 824 PB.2845.2 chr4 - 2546 5 novel_in_catalog CHIC2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 513 None 2 10 0 FALSE 0 0 NA C coding 151 453 395 847 PB.4417.4 chr7 + 6145 8 novel_not_in_catalog UPP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 5947 None 2 37 1 TRUE 0 0 NA C coding 103 309 5776 6084 PB.4417.3 chr7 + 3644 11 novel_not_in_catalog UPP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3447 None 2 21 2 TRUE 0 0 NA C coding 103 309 3276 3584 PB.4417.2 chr7 + 2701 8 novel_in_catalog UPP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2497 None 6 18 0 FALSE 0 0 NA C coding 211 633 2002 2634 PB.4417.1 chr7 + 1700 9 full-splice_match UPP1 ENST00000395564.8 1375 9 -10 -315 no_subtype FALSE canonical NA NA 1183 None 34 4 0 FALSE 0 0 NA C coding 310 930 391 1320 PB.10872.1 chrX + 3501 23 full-splice_match OFD1 ENST00000340096.10 3611 23 -22 132 no_subtype FALSE canonical NA NA 3345 None 2 1 0 FALSE 0 0 NA A coding 1011 3033 353 3385 PB.8114.1 chr15 - 2999 1 antisense novelGene_AQP9_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6355.1 chr11 + 2075 4 full-splice_match TMEM109 ENST00000227525.7 2413 4 303 35 no_subtype FALSE canonical NA NA 440 None 37 4 0 FALSE 0 0 NA C coding 243 729 101 829 PB.6355.2 chr11 + 1603 1 incomplete-splice_match TMEM109 ENST00000227525.7 2413 4 807 4 no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA C coding 68 204 122 325 PB.9734.2 chr19 + 1408 4 novel_in_catalog RAB11B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 384 None 5 9 0 FALSE 0 0 NA C coding 99 297 231 527 PB.11002.1 chrX - 2745 3 full-splice_match LINC01278 ENST00000609143.5 2768 3 18 5 no_subtype FALSE canonical NA NA 200 None 2 12 0 FALSE 0 0 NA A coding 118 354 2392 2745 PB.8361.1 chr16 - 1234 6 full-splice_match TSR3 ENST00000007390.2 1243 6 5 4 no_subtype FALSE canonical NA NA 214 None 2 1 0 FALSE 0 0 NA A coding 312 936 103 1038 PB.9734.1 chr19 + 1540 5 full-splice_match RAB11B ENST00000328024.10 1751 5 204 7 no_subtype FALSE canonical NA NA 525 None 119 9 0 FALSE 0 0 NA C coding 218 654 15 668 PB.6810.2 chr12 + 2853 7 novel_in_catalog NECAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 691 None 2 5 0 FALSE 0 0 NA C coding 260 780 16 795 PB.6810.3 chr12 + 2944 6 novel_in_catalog NECAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 775 None 3 5 0 FALSE 0 0 NA C coding 192 576 13 588 PB.6810.1 chr12 + 2515 8 full-splice_match NECAP1 ENST00000339754.9 2587 8 73 -1 no_subtype FALSE canonical NA NA 784 None 17 4 0 FALSE 0 0 NA C coding 275 825 6 830 PB.6810.4 chr12 + 2695 7 novel_not_in_catalog NECAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 969 None 2 13 1 FALSE 0 0 NA C coding 192 576 6 581 PB.8077.1 chr15 + 2995 1 novel_in_catalog DTWD1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5808.1 chr10 + 2481 18 incomplete-splice_match CCAR1 ENST00000265872.10 4683 25 29 2173 3prime_fragment FALSE canonical NA NA 2388 None 11 1 0 FALSE 0 0 NA B coding 797 2391 91 2481 PB.1845.12 chr2 - 5915 34 incomplete-splice_match FN1 ENST00000336916.8 8435 46 2107 413 5prime_fragment FALSE canonical NA NA 100 None 2 8 0 FALSE 0 0 NA C coding 1430 4290 935 5224 PB.5808.3 chr10 + 2881 3 novel_not_in_catalog CCAR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1974 None 6 23 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.5825.1 chr10 + 4121 21 novel_not_in_catalog PALD1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2704 None 2 12 0 TRUE 0 0 NA A coding 856 2568 287 2854 PB.10929.2 chrX + 1917 15 full-splice_match MAOA ENST00000338702.3 4015 15 83 2015 no_subtype FALSE canonical NA NA 1477 None 68 1 0 FALSE 0 0 NA C coding 527 1581 41 1621 PB.22.1 chr1 + 1530 3 genic DFFB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1507 None 2 11 1 TRUE 0 0 NA A coding 135 405 544 948 PB.3943.1 chr6 - 2913 1 novel_in_catalog MRPS18A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9169.4 chr17 + 2598 12 novel_in_catalog GRN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2157 None 9 2 0 FALSE 0 0 NA C coding 496 1488 805 2292 PB.9129.1 chr17 - 1633 6 full-splice_match RAB5C ENST00000346213.8 1671 6 27 11 no_subtype FALSE canonical NA NA 98 None 71 4 0 FALSE 0 0 NA A coding 216 648 187 834 PB.7080.1 chr12 - 1747 1 full-splice_match RP11-114F3.4 ENST00000610945.1 1311 1 823 -1259 no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1205.1 chr2 - 1410 7 full-splice_match LAPTM4A ENST00000175091.4 1765 7 350 5 no_subtype FALSE canonical NA NA 269 None 68 6 0 FALSE 0 0 NA A coding 233 699 159 857 PB.2180.1 chr3 + 2104 16 full-splice_match ARIH2 ENST00000356401.8 4933 16 51 2778 no_subtype FALSE canonical NA NA 1698 None 11 0 0 FALSE 0 0 NA C coding 493 1479 289 1767 PB.2180.2 chr3 + 2137 17 novel_in_catalog ARIH2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1731 None 4 1 0 FALSE 0 0 NA C coding 351 1053 748 1800 PB.2180.3 chr3 + 1693 14 novel_in_catalog ARIH2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1289 None 2 1 0 FALSE 0 0 NA C coding 351 1053 306 1358 PB.8778.1 chr16 - 2929 10 novel_not_in_catalog TLDC1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 20 2 TRUE 0 0 NA A coding 190 570 103 672 PB.234.1 chr1 + 2227 12 full-splice_match RBBP4 ENST00000373493.9 7943 12 152 5564 no_subtype FALSE canonical NA NA 1219 None 7 5 0 FALSE 0 0 NA C coding 425 1275 8 1282 PB.234.2 chr1 + 2239 14 novel_not_in_catalog RBBP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1818 None 5 6 1 TRUE 0 0 NA C coding 425 1275 28 1302 PB.6991.11 chr12 - 2980 14 novel_in_catalog ITGB7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 32 None 3 4 0 FALSE 0 0 NA C coding 359 1077 36 1112 PB.4280.1 chr7 - 3473 5 full-splice_match FBXL18 ENST00000382368.7 3498 5 -4 29 no_subtype FALSE canonical NA NA 146 None 10 6 0 FALSE 0 0 NA A coding 718 2154 129 2282 PB.7339.2 chr12 - 1522 1 novel_in_catalog VPS33A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4934.2 chr8 - 512 4 full-splice_match RPS20 ENST00000009589.7 626 4 0 114 no_subtype FALSE canonical NA NA 126 None 7 2 0 FALSE 0 0 NA A coding 119 357 124 480 PB.10581.2 chr21 + 3494 1 genic_intron novelGene_425 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 19 0 FALSE 0 0 NA A coding 115 345 432 776 PB.4196.3 chr6 + 5485 19 novel_not_in_catalog PLEKHG1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5397 None 2 4 1 TRUE 0 0 NA B coding 1385 4155 415 4569 PB.11144.1 chrX + 5836 33 novel_in_catalog STAG2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3911 None 14 9 0 FALSE 0 0 NA C coding 1231 3693 240 3932 PB.937.4 chr1 - 1963 11 novel_in_catalog UCHL5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 467 None 4 9 1 FALSE 0 0 NA C coding 204 612 764 1375 PB.937.6 chr1 - 2979 1 full-splice_match SCARNA18B ENST00000458806.1 135 1 -1917 -927 no_subtype FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA A coding 147 441 73 513 PB.1851.1 chr2 - 2432 3 novel_not_in_catalog CXCR2P1 novel NA NA NA NA no_subtype FALSE canonical NA NA 191 None 3 12 1 TRUE 0 0 NA A coding 134 402 885 1286 PB.591.1 chr1 - 1530 1 incomplete-splice_match NRAS ENST00000369535.4 4449 7 2905 15 no_subtype FALSE canonical NA NA NA None 77 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2460.1 chr3 + 3170 18 full-splice_match ACAD9 ENST00000308982.11 2454 18 19 -735 no_subtype FALSE canonical NA NA 1827 None 10 14 0 FALSE 0 0 NA C coding 621 1863 63 1925 PB.4652.2 chr7 + 3102 5 genic_intron novelGene_1117 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1461 None 3 27 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.5224.1 chr9 - 1642 1 incomplete-splice_match NFIB ENST00000543693.5 7622 11 5970 11 no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2400.1 chr3 + 3337 11 full-splice_match POGLUT1 ENST00000295588.8 3533 11 50 146 no_subtype FALSE canonical NA NA 1056 None 4 20 0 FALSE 0 0 NA C coding 392 1176 35 1210 PB.8375.1 chr16 - 939 7 full-splice_match RPS2 ENST00000343262.8 985 7 34 12 no_subtype FALSE canonical NA NA 20 None 46 1 0 FALSE 0 0 NA A coding 293 879 24 902 PB.758.1 chr1 - 2809 1 incomplete-splice_match ETV3 ENST00000368192.8 5254 5 2439 7 no_subtype FALSE canonical NA NA NA None 4 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10808.1 chr22 - 2610 16 full-splice_match ARFGAP3 ENST00000263245.9 2857 16 126 121 no_subtype FALSE canonical NA NA 163 None 75 7 0 FALSE 0 0 NA A coding 516 1548 95 1642 PB.3063.1 chr4 - 3348 1 genic_intron novelGene_1211 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A coding 229 687 548 1234 PB.758.4 chr1 - 1817 4 full-splice_match ETV3 ENST00000326786.4 1539 4 98 -376 no_subtype FALSE canonical NA NA 61 None 6 3 0 FALSE 0 0 NA C coding 143 429 75 503 PB.758.5 chr1 - 3049 4 novel_not_in_catalog ETV3 novel NA NA NA NA no_subtype FALSE canonical NA NA 64 None 7 7 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.6596.1 chr11 + 4620 2 full-splice_match ENDOD1 ENST00000278505.4 4687 2 60 7 no_subtype FALSE canonical NA NA 358 None 4 17 0 FALSE 0 0 NA A coding 500 1500 59 1558 PB.8990.4 chr17 + 1692 11 full-splice_match LGALS9 ENST00000395473.6 3114 11 1417 5 no_subtype FALSE canonical NA NA 972 None 6 11 2 FALSE 0 0 NA C coding 355 1065 52 1116 PB.8990.7 chr17 + 2611 5 novel_in_catalog LGALS9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1909 None 2 22 1 FALSE 0 0 NA C coding 131 393 1661 2053 PB.8990.6 chr17 + 5857 2 novel_in_catalog LGALS9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5137 None 2 33 0 FALSE 0 0 NA C coding 141 423 5408 5830 PB.8990.1 chr17 + 1527 10 full-splice_match LGALS9 ENST00000302228.9 3018 10 1453 38 no_subtype FALSE canonical NA NA 840 None 124 6 1 FALSE 0 0 NA C coding 323 969 16 984 PB.8990.2 chr17 + 1627 11 novel_not_in_catalog LGALS9 novel NA NA NA NA no_subtype FALSE canonical NA NA 905 None 3 8 2 FALSE 0 0 NA C coding 332 996 54 1049 PB.1237.1 chr2 + 1888 15 full-splice_match SNX17 ENST00000233575.6 2044 15 153 3 no_subtype TRUE canonical NA NA 1368 None 66 3 0 FALSE 0 0 NA A coding 470 1410 70 1479 PB.1589.2 chr2 + 3543 10 novel_not_in_catalog PLEKHB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1531 None 299 19 1 TRUE 0 0 NA B coding 222 666 108 773 PB.6917.3 chr12 - 5669 15 full-splice_match SCAF11 ENST00000369367.7 7543 15 -6 1880 no_subtype FALSE canonical NA NA 219 None 2 15 1 FALSE 0 0 NA C coding 1463 4389 241 4629 PB.1589.4 chr2 + 3442 8 novel_not_in_catalog PLEKHB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1434 None 31 19 1 TRUE 0 0 NA B coding 222 666 11 676 PB.6917.5 chr12 - 2778 11 incomplete-splice_match SCAF11 ENST00000369367.7 7543 15 6 4759 internal_fragment FALSE canonical NA NA 207 None 4 2 0 FALSE 0 0 NA C coding 850 2550 229 2778 PB.3677.8 chr5 - 1453 2 incomplete-splice_match DOK3 ENST00000510898.5 467 3 166 -1152 5prime_fragment FALSE canonical NA NA 112 None 2 5 0 FALSE 0 0 NA B coding 206 618 47 664 PB.6917.7 chr12 - 1311 4 full-splice_match SCAF11 ENST00000395453.2 1336 4 21 4 no_subtype FALSE canonical NA NA 207 None 2 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10646.1 chr22 + 3189 18 novel_not_in_catalog MED15 novel NA NA NA NA no_subtype FALSE canonical NA NA 2144 None 34 8 0 TRUE 0 0 NA C coding 748 2244 35 2278 PB.2971.1 chr4 + 2856 9 full-splice_match DAPP1 ENST00000512369.1 1440 9 9 -1425 no_subtype FALSE canonical NA NA 833 None 47 15 0 FALSE 0 0 NA C coding 280 840 60 899 PB.10646.3 chr22 + 2899 19 novel_not_in_catalog MED15 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1848 None 2 10 1 TRUE 0 0 NA C coding 630 1890 93 1982 PB.10646.2 chr22 + 2692 3 novel_in_catalog MED15 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 258 None 5 9 0 FALSE 0 0 NA C coding 71 213 103 315 PB.10646.5 chr22 + 3452 2 novel_not_in_catalog MED15 novel NA NA NA NA no_subtype FALSE canonical NA NA 801 None 5 21 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.10646.4 chr22 + 3337 18 full-splice_match MED15 ENST00000263205.11 3351 18 2 12 no_subtype FALSE canonical NA NA 2297 None 8 12 0 FALSE 0 0 NA C coding 788 2364 68 2431 PB.10646.6 chr22 + 3144 19 novel_not_in_catalog MED15 novel NA NA NA NA no_subtype FALSE canonical NA NA 2098 None 2 15 0 TRUE 0 0 NA C coding 717 2151 82 2232 PB.7056.3 chr12 + 2797 22 novel_in_catalog MARS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2584 None 5 1 1 FALSE 0 0 NA C coding 826 2478 9 2486 PB.7056.2 chr12 + 2700 21 full-splice_match MARS ENST00000262027.9 2905 21 205 0 no_subtype FALSE canonical NA NA 2485 None 110 1 1 FALSE 0 0 NA C coding 666 1998 632 2629 PB.11013.1 chrX + 3296 5 full-splice_match EFNB1 ENST00000204961.4 3314 5 24 -6 no_subtype FALSE canonical NA NA 1384 None 18 6 0 FALSE 0 0 NA A coding 346 1038 757 1794 PB.7056.7 chr12 + 3201 21 novel_in_catalog MARS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2988 None 2 4 2 FALSE 0 0 NA C coding 596 1788 16 1803 PB.7056.6 chr12 + 2804 21 novel_not_in_catalog MARS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2587 None 5 1 0 TRUE 0 0 NA C coding 849 2547 25 2571 PB.7056.5 chr12 + 3478 14 novel_in_catalog MARS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1660 None 2 7 0 FALSE 0 0 NA C coding 596 1788 26 1813 PB.10348.1 chr20 + 5517 15 novel_not_in_catalog CEP250 novel NA NA NA NA no_subtype FALSE canonical NA NA 4471 None 2 7 1 TRUE 0 0 NA A coding 1524 4572 161 4732 PB.3305.1 chr5 + 1356 12 full-splice_match CDK7 ENST00000256443.7 1439 12 -17 100 no_subtype FALSE canonical NA NA 1132 None 3 2 0 FALSE 0 0 NA A coding 346 1038 121 1158 PB.5551.1 chr9 + 3742 14 novel_not_in_catalog TBC1D13 novel NA NA NA NA no_subtype FALSE canonical NA NA 2880 None 28 15 2 TRUE 0 0 NA B coding 400 1200 42 1241 PB.10981.2 chrX + 2957 6 novel_in_catalog TSPYL2 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 2195 None 4 7 0 FALSE 0 0 NA C coding 390 1170 1187 2356 PB.599.1 chr1 - 2889 1 antisense novelGene_ATP1A1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A coding 62 186 294 479 PB.9612.1 chr18 + 2834 3 novel_not_in_catalog RP11-862L9.3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1068 None 16 21 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.2911.2 chr4 - 1286 8 full-splice_match HNRNPDL ENST00000602300.5 1291 8 3 2 no_subtype FALSE canonical NA NA 191 None 12 0 0 FALSE 0 0 NA C coding 301 903 106 1008 PB.2911.3 chr4 - 2435 7 full-splice_match HNRNPDL ENST00000507721.5 2404 7 -43 12 no_subtype FALSE canonical NA NA 193 None 7 8 0 FALSE 0 0 NA C coding 301 903 108 1010 PB.2911.1 chr4 - 2680 9 novel_not_in_catalog HNRNPDL novel NA NA NA NA no_subtype TRUE canonical NA NA 191 None 20 25 1 TRUE 0 0 NA C coding 301 903 106 1008 PB.2911.4 chr4 - 1359 9 full-splice_match HNRNPDL ENST00000349655.8 1402 9 39 4 no_subtype FALSE canonical NA NA 161 None 3 2 0 FALSE 0 0 NA C coding 301 903 76 978 PB.2883.3 chr4 - 2844 21 novel_in_catalog SDAD1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 146 None 2 14 1 FALSE 0 0 NA C coding 258 774 1240 2013 PB.7648.1 chr14 - 3359 15 incomplete-splice_match HECTD1 ENST00000554882.5 3748 18 381 8 5prime_fragment FALSE canonical NA NA 111 None 3 3 0 FALSE 0 0 NA B coding 736 2208 339 2546 PB.10297.1 chr20 - 3665 1 full-splice_match THBD ENST00000377103.2 4109 1 74 370 no_subtype FALSE canonical NA NA NA None 35 13 0 FALSE 0 0 NA A coding 575 1725 164 1888 PB.7648.3 chr14 - 1780 10 incomplete-splice_match HECTD1 ENST00000553700.5 9080 43 135 7165 internal_fragment FALSE canonical NA NA 279 None 3 1 0 FALSE 0 0 NA B coding 471 1413 367 1779 PB.2494.2 chr3 - 4080 24 novel_in_catalog PIK3CB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 226 None 2 14 0 FALSE 0 0 NA B coding 1064 3192 366 3557 PB.10423.1 chr20 - 2060 10 novel_not_in_catalog SLC35C2 novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 17 8 0 FALSE 0 0 NA A coding 365 1095 311 1405 PB.9542.2 chr18 + 5778 23 novel_not_in_catalog ELP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2669 None 3 23 1 TRUE 0 0 NA C coding 826 2478 36 2513 PB.9542.1 chr18 + 2530 22 full-splice_match ELP2 ENST00000358232.10 8459 22 21 5908 no_subtype FALSE canonical NA NA 2366 None 3 2 0 FALSE 0 0 NA C coding 826 2478 43 2520 PB.2551.1 chr3 - 2834 11 full-splice_match CCNL1 ENST00000295926.7 2388 11 66 -512 no_subtype FALSE canonical NA NA 356 None 2 8 0 FALSE 0 0 NA C coding 526 1578 54 1631 PB.9542.7 chr18 + 3182 1 incomplete-splice_match ELP2 ENST00000358232.10 8459 22 2641 2637 no_subtype FALSE canonical NA NA NA None 12 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9542.6 chr18 + 3175 3 novel_not_in_catalog ELP2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 69 None 21 24 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.1595.1 chr2 + 3519 2 genic MIR3679 novel NA NA NA NA no_subtype FALSE canonical NA NA 3490 None 6 27 1 FALSE 0 0 NA B coding 125 375 2684 3058 PB.9542.4 chr18 + 3209 2 novel_not_in_catalog ELP2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 27 None 8 22 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.2302.12 chr3 - 2723 2 genic_intron novelGene_672 novel NA NA NA NA no_subtype TRUE canonical NA NA 31 None 3 17 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.7959.153 chr14 - 1557 9 fusion IGHG1,IGHV3-7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 122 None 2 18 4 TRUE 0 0 NA B coding 196 588 834 1421 PB.2384.1 chr3 + 4577 15 full-splice_match ATP6V1A ENST00000273398.7 4591 15 11 3 no_subtype FALSE canonical NA NA 1858 None 2 21 1 FALSE 0 0 NA C coding 617 1851 98 1948 PB.784.5 chr1 - 3096 15 novel_not_in_catalog DCAF8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 354 None 10 12 1 TRUE 0 0 NA B coding 597 1791 451 2241 PB.2240.2 chr3 + 1599 2 full-splice_match SMIM4 ENST00000307106.3 274 2 36 -1361 no_subtype FALSE canonical NA NA 136 None 3 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2240.1 chr3 + 1732 2 full-splice_match SMIM4 ENST00000477703.5 1770 2 33 5 no_subtype FALSE canonical NA NA 269 None 2 13 0 FALSE 0 0 NA C coding 70 210 119 328 PB.6054.1 chr10 + 2748 2 antisense novelGene_TIAL1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 2 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.784.1 chr1 - 2792 14 novel_not_in_catalog DCAF8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 115 None 24 7 1 TRUE 0 0 NA B coding 597 1791 147 1937 PB.2374.3 chr3 + 2713 3 novel_not_in_catalog SLC35A5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2397 None 6 23 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.784.3 chr1 - 3802 15 novel_not_in_catalog DCAF8 novel NA NA NA NA no_subtype FALSE canonical NA NA 38 None 2 16 2 TRUE 0 0 NA B coding 597 1791 139 1929 PB.6039.4 chr10 - 2953 1 novel_in_catalog ABLIM1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1845.15 chr2 - 7751 45 full-splice_match FN1 ENST00000443816.5 7762 45 6 5 no_subtype FALSE canonical NA NA 413 None 6 7 0 FALSE 0 0 NA C coding 2265 6795 266 7060 PB.7213.1 chr12 + 7698 6 novel_not_in_catalog TCP11L2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 7501 None 2 56 1 TRUE 0 0 NA A coding 147 441 6375 6815 PB.3300.1 chr5 + 2890 1 genic_intron novelGene_632 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3582.2 chr5 - 3811 14 novel_not_in_catalog DCTN4 novel NA NA NA NA no_subtype FALSE canonical NA NA 166 None 61 15 0 TRUE 0 0 NA A coding 460 1380 32 1411 PB.8602.3 chr16 - 1747 3 novel_in_catalog SNX20 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 119 None 2 9 0 FALSE 0 0 NA C coding 114 342 129 470 PB.5756.4 chr10 - 1625 4 full-splice_match CXCL12 ENST00000374426.6 470 4 -54 -1101 no_subtype FALSE canonical NA NA 153 None 3 6 0 FALSE 0 0 NA C coding 119 357 93 449 PB.8602.1 chr16 - 1546 1 incomplete-splice_match SNX20 ENST00000330943.8 2904 4 1350 9 no_subtype FALSE canonical NA NA NA None 3 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.196.2 chr1 - 6074 19 novel_not_in_catalog EYA3 novel NA NA NA NA no_subtype FALSE canonical NA NA 165 None 2 21 0 TRUE 0 0 NA B coding 573 1719 234 1952 PB.196.3 chr1 - 5935 18 novel_not_in_catalog EYA3 novel NA NA NA NA no_subtype FALSE canonical NA NA 165 None 5 24 0 TRUE 0 0 NA B coding 527 1581 234 1814 PB.10956.1 chrX + 1461 6 full-splice_match GATA1 ENST00000376670.7 1497 6 35 1 no_subtype FALSE canonical NA NA 946 None 2 0 0 FALSE 0 0 NA A coding 413 1239 77 1315 PB.5756.5 chr10 - 1851 3 full-splice_match CXCL12 ENST00000343575.10 1857 3 -5 11 no_subtype FALSE canonical NA NA 153 None 298 3 0 FALSE 0 0 NA C coding 89 267 93 359 PB.196.4 chr1 - 1281 1 incomplete-splice_match EYA3 ENST00000540618.5 5885 17 4603 2 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.196.5 chr1 - 5900 18 novel_not_in_catalog EYA3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 102 None 2 33 2 TRUE 0 0 NA B coding 329 987 794 1780 PB.7692.1 chr14 + 3321 1 antisense novelGene_NIN_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7780.5 chr14 - 4302 21 novel_not_in_catalog ACTN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 351 None 4 4 0 TRUE 0 0 NA B coding 784 2352 247 2598 PB.4538.1 chr7 - 2068 13 full-splice_match CYP3A7-CYP3A51P ENST00000620220.4 1704 13 -94 -270 no_subtype FALSE canonical NA NA 174 None 3 4 0 FALSE 0 0 NA A coding 503 1509 104 1612 PB.2919.1 chr4 - 2793 3 novel_not_in_catalog PLAC8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2735 None 2 26 2 TRUE 0 0 NA B coding 89 267 31 297 PB.2260.1 chr3 + 2831 3 full-splice_match PDE12 ENST00000311180.8 8773 3 32 5910 no_subtype FALSE canonical NA NA 1458 None 18 7 0 FALSE 0 0 NA A coding 609 1827 72 1898 PB.5756.3 chr10 - 2761 1 incomplete-splice_match CXCL12 ENST00000374429.6 3532 4 763 9 no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.11100.1 chrX - 1862 3 full-splice_match TSC22D3 ENST00000372397.6 2027 3 147 18 no_subtype FALSE canonical NA NA 299 None 492 6 0 FALSE 0 0 NA C coding 134 402 178 579 PB.7237.1 chr12 + 5685 30 novel_not_in_catalog UBE3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3577 None 9 17 2 TRUE 0 0 NA B coding 1068 3204 563 3766 PB.6039.3 chr10 - 1599 17 novel_not_in_catalog ABLIM1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 167 None 3 15 2 TRUE 0 0 NA B coding 197 591 891 1481 PB.7237.4 chr12 + 3612 2 novel_in_catalog UBE3B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1498 None 2 15 0 FALSE 0 0 NA B coding 148 444 1224 1667 PB.6039.2 chr10 - 6024 17 novel_in_catalog ABLIM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 144 None 10 21 0 FALSE 0 0 NA B coding 427 1281 199 1479 PB.8275.1 chr15 + 1595 6 novel_in_catalog MRPS11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 484 None 2 10 0 FALSE 0 0 NA A coding 193 579 11 589 PB.7060.1 chr12 + 3099 10 full-splice_match PIP4K2C ENST00000354947.9 2924 10 -9 -166 no_subtype FALSE canonical NA NA 1210 None 94 11 0 FALSE 0 0 NA C coding 421 1263 26 1288 PB.7060.2 chr12 + 2800 1 novel_in_catalog PIP4K2C novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1496.4 chr2 - 3761 17 novel_in_catalog TMEM131 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 69 None 3 6 0 FALSE 0 0 NA B coding 967 2901 100 3000 PB.10402.1 chr20 - 1763 1 antisense novelGene_YWHAB_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4518.1 chr7 - 2841 2 genic_intron novelGene_864 novel NA NA NA NA no_subtype FALSE canonical NA NA 32 None 2 23 1 FALSE 0 0 NA A coding 87 261 47 307 PB.4518.3 chr7 - 1658 10 full-splice_match SGCE ENST00000447873.5 1597 10 -40 -21 no_subtype FALSE canonical NA NA 217 None 2 6 0 FALSE 0 0 NA C coding 428 1284 109 1392 PB.4518.2 chr7 - 1633 11 full-splice_match SGCE ENST00000265735.11 1694 11 63 -2 no_subtype FALSE canonical NA NA 157 None 5 3 0 FALSE 0 0 NA C coding 437 1311 49 1359 PB.3750.2 chr6 + 1864 4 novel_in_catalog CD83 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 300 None 2 3 0 FALSE 0 0 NA C coding 26 78 349 426 PB.3750.3 chr6 + 3741 2 novel_in_catalog CD83 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 77 None 5 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3750.1 chr6 + 2094 5 full-splice_match CD83 ENST00000379153.3 2471 5 131 246 no_subtype FALSE canonical NA NA 529 None 11 2 0 FALSE 0 0 NA C coding 205 615 41 655 PB.7121.1 chr12 + 2643 6 full-splice_match TMEM19 ENST00000266673.9 5656 6 10 3003 no_subtype FALSE canonical NA NA 1431 None 11 12 0 FALSE 0 0 NA A coding 300 900 693 1592 PB.3677.4 chr5 - 3575 6 novel_in_catalog DOK3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 60 None 3 22 0 FALSE 0 0 NA B coding 440 1320 178 1497 PB.2551.11 chr3 - 2741 7 novel_in_catalog CCNL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 356 None 2 8 0 FALSE 0 0 NA C coding 225 675 54 728 PB.9512.4 chr18 - 4409 25 full-splice_match NPC1 ENST00000269228.9 5157 25 457 291 no_subtype FALSE canonical NA NA 155 None 6 6 0 FALSE 0 0 NA C coding 1278 3834 99 3932 PB.9512.5 chr18 - 2877 10 novel_in_catalog NPC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 155 None 4 11 1 FALSE 0 0 NA C coding 553 1659 99 1757 PB.9938.3 chr19 + 3269 14 novel_not_in_catalog CD22 novel NA NA NA NA no_subtype FALSE canonical NA NA 2481 None 2 8 1 FALSE 0 0 NA C coding 775 2325 67 2391 PB.9938.4 chr19 + 3204 13 novel_in_catalog CD22 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2415 None 2 8 0 FALSE 0 0 NA C coding 727 2181 364 2544 PB.9938.5 chr19 + 3264 15 novel_not_in_catalog CD22 novel NA NA NA NA no_subtype FALSE canonical NA NA 2467 None 2 8 0 TRUE 0 0 NA C coding 847 2541 56 2596 PB.8563.3 chr16 + 1303 3 full-splice_match TMEM265 ENST00000615541.2 995 3 -313 5 no_subtype FALSE canonical NA NA 808 None 2 6 0 FALSE 0 0 NA A coding 108 324 644 967 PB.8563.2 chr16 + 2769 1 incomplete-splice_match SRCAP ENST00000262518.8 11754 34 7699 1287 no_subtype FALSE canonical NA NA NA None 8 5 0 FALSE 0 0 NA B coding 435 1305 1072 2376 PB.2055.1 chr3 + 2738 8 full-splice_match RARB ENST00000330688.8 3084 8 341 5 no_subtype FALSE canonical NA NA 1230 None 2 14 0 FALSE 0 0 NA A coding 448 1344 81 1424 PB.4178.1 chr6 + 5770 39 novel_in_catalog UTRN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5702 None 3 10 1 FALSE 0 0 NA B coding 1823 5469 300 5768 PB.4764.8 chr7 - 4029 28 novel_not_in_catalog KMT2C novel NA NA NA NA no_subtype FALSE canonical NA NA 14 None 2 5 1 TRUE 0 0 NA B coding 1338 4014 16 4029 PB.7575.4 chr13 - 3412 3 novel_not_in_catalog ANKRD10 novel NA NA NA NA no_subtype FALSE canonical NA NA 1371 None 2 37 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.7549.2 chr13 + 5653 28 novel_not_in_catalog IPO5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3423 None 2 17 0 TRUE 0 0 NA B coding 1097 3291 7 3297 PB.9300.2 chr17 - 5975 10 novel_not_in_catalog ERN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 185 None 2 43 1 TRUE 0 0 NA B coding 280 840 324 1163 PB.9300.1 chr17 - 2697 1 incomplete-splice_match ERN1 ENST00000433197.3 7876 22 5178 2 no_subtype FALSE canonical NA NA NA None 3 20 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7549.1 chr13 + 3969 27 novel_not_in_catalog IPO5 novel NA NA NA NA no_subtype FALSE canonical NA NA 3226 None 80 3 0 TRUE 0 0 NA B coding 1097 3291 20 3310 PB.2302.11 chr3 - 2700 1 genic_intron novelGene_672 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1615.1 chr2 + 5733 8 full-splice_match ARHGAP15 ENST00000552641.5 1086 8 0 -4647 no_subtype FALSE canonical NA NA 641 None 2 41 0 FALSE 0 0 NA C coding 239 717 69 785 PB.693.1 chr1 - 3100 1 incomplete-splice_match GATAD2B ENST00000368655.4 7478 11 2473 1906 no_subtype FALSE canonical NA NA NA None 16 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11143.1 chrX + 3355 7 full-splice_match XIAP ENST00000371199.7 8591 7 -21 5257 no_subtype FALSE canonical NA NA 1620 None 4 16 0 FALSE 0 0 NA C coding 497 1491 321 1811 PB.8422.1 chr16 + 1928 13 full-splice_match ALG1 ENST00000262374.9 2132 13 6 198 no_subtype TRUE canonical NA NA 1288 None 2 6 0 FALSE 0 0 NA A coding 464 1392 26 1417 PB.11143.3 chrX + 5673 8 novel_not_in_catalog XIAP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5094 None 2 25 0 TRUE 0 0 NA C coding 497 1491 211 1701 PB.7769.2 chr14 + 1470 8 full-splice_match EIF2S1 ENST00000256383.8 4485 8 356 2659 no_subtype FALSE canonical NA NA 927 None 71 0 0 FALSE 0 0 NA A coding 315 945 106 1050 PB.7769.3 chr14 - 1488 9 full-splice_match PLEK2 ENST00000216446.8 1549 9 54 7 no_subtype FALSE canonical NA NA 129 None 5 5 0 FALSE 0 0 NA C coding 353 1059 88 1146 PB.9586.1 chr18 - 1807 3 novel_not_in_catalog RNF152 novel NA NA NA NA no_subtype FALSE canonical NA NA 197 None 2 7 0 TRUE 0 0 NA B coding 203 609 435 1043 PB.7769.1 chr14 - 2659 2 genic ATP6V1D novel NA NA NA NA no_subtype FALSE non_canonical NA NA 280 None 7 27 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.7403.1 chr13 - 4007 1 genic_intron novelGene_267 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 36 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6628.2 chr11 + 4997 19 novel_not_in_catalog CUL5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2541 None 6 18 1 FALSE 0 0 NA B coding 550 1650 1084 2733 PB.4043.1 chr6 - 2656 10 full-splice_match FBXL4 ENST00000369244.6 8035 10 -19 5398 no_subtype TRUE canonical NA NA 140 None 7 4 0 FALSE 0 0 NA A coding 547 1641 671 2311 PB.121.4 chr1 + 2969 1 genic_intron novelGene_208 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2106.4 chr3 - 3892 4 novel_not_in_catalog CX3CR1 novel NA NA NA NA no_subtype TRUE canonical NA NA 268 None 3 14 2 TRUE 0 0 NA C coding 365 1095 883 1977 PB.2106.2 chr3 + 3091 3 antisense novelGene_CX3CR1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3012 None 71 11 1 FALSE 0 0 NA B coding 138 414 2565 2978 PB.2106.3 chr3 + 1815 2 antisense novelGene_CX3CR1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1716 None 2 11 1 FALSE 0 0 NA B coding 102 306 503 808 PB.5054.1 chr8 - 2804 5 novel_not_in_catalog KLF10 novel NA NA NA NA no_subtype FALSE canonical NA NA 158 None 189 6 0 TRUE 0 0 NA A coding 480 1440 123 1562 PB.2106.1 chr3 - 2712 2 full-splice_match CX3CR1 ENST00000399220.2 3106 2 -1 395 no_subtype FALSE canonical NA NA 82 None 37 16 0 FALSE 0 0 NA C coding 355 1065 92 1156 PB.852.1 chr1 + 2502 7 full-splice_match BLZF1 ENST00000367808.7 2749 7 244 3 no_subtype FALSE canonical NA NA 1196 None 5 10 0 FALSE 0 0 NA A coding 400 1200 180 1379 PB.1712.1 chr2 - 686 5 full-splice_match ATP5G3 ENST00000284727.8 5484 5 2907 1891 no_subtype FALSE canonical NA NA 45 None 10 1 0 FALSE 0 0 NA C coding 142 426 119 544 PB.8910.1 chr17 + 5525 23 novel_not_in_catalog KDM6B novel NA NA NA NA no_subtype TRUE canonical NA NA 5316 None 2 7 0 FALSE 0 0 NA C coding 1643 4929 409 5337 PB.121.6 chr1 + 5808 14 novel_not_in_catalog ZBTB40 novel NA NA NA NA no_subtype FALSE canonical NA NA 3589 None 2 14 0 FALSE 0 0 NA C coding 829 2487 1295 3781 PB.665.4 chr1 - 4316 22 full-splice_match ARNT ENST00000358595.9 4887 22 170 401 no_subtype FALSE canonical NA NA 56 None 4 11 0 FALSE 0 0 NA C coding 789 2367 32 2398 PB.8910.2 chr17 + 6205 23 full-splice_match KDM6B ENST00000448097.6 5422 23 -58 -725 no_subtype FALSE canonical NA NA 5297 None 5 8 0 FALSE 0 0 NA C coding 1643 4929 390 5318 PB.573.5 chr1 + 1806 2 antisense novelGene_MRPL53P1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 166 None 2 5 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.573.4 chr1 + 3074 9 novel_in_catalog CAPZA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1536 None 4 24 0 FALSE 0 0 NA B coding 218 654 1021 1674 PB.573.6 chr1 + 1550 1 genic_intron novelGene_1000 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 11 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.573.1 chr1 + 2988 11 novel_not_in_catalog CAPZA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1368 None 17 13 0 TRUE 0 0 NA B coding 286 858 649 1506 PB.2132.1 chr3 + 3214 11 novel_not_in_catalog TCAIM novel NA NA NA NA no_subtype FALSE canonical NA NA 1225 None 9 16 0 TRUE 0 0 NA A coding 273 819 401 1219 PB.573.3 chr1 + 2974 4 novel_not_in_catalog CAPZA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2537 None 50 20 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.3980.3 chr6 - 1702 2 antisense novelGene_PTP4A1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 25 None 2 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3980.2 chr6 - 3045 2 antisense novelGene_PTP4A1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 396 None 2 25 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.3980.1 chr6 - 2005 1 full-splice_match RP5-1148A21.3 ENST00000584934.1 1404 1 -774 173 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1492.1 chr2 - 3647 15 novel_not_in_catalog SEMA4C novel NA NA NA NA no_subtype TRUE canonical NA NA 234 None 2 13 0 FALSE 0 0 NA A coding 833 2499 272 2770 PB.8069.1 chr15 + 1491 1 full-splice_match EID1 ENST00000530028.2 2298 1 259 548 no_subtype FALSE canonical NA NA NA None 97 7 0 FALSE 0 0 NA A coding 187 561 33 593 PB.10923.12 chrX + 1493 1 incomplete-splice_match DDX3X ENST00000629496.2 5023 18 3457 74 no_subtype FALSE canonical NA NA NA None 4 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9588.1 chr18 - 3004 5 genic_intron novelGene_597 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1471 None 7 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5012.1 chr8 + 4186 2 full-splice_match PDP1 ENST00000297598.4 4272 2 81 5 no_subtype FALSE canonical NA NA 144 None 2 21 0 FALSE 0 0 NA A coding 537 1611 189 1799 PB.2447.1 chr3 - 2485 1 novel_in_catalog ZXDC novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9252.1 chr17 - 5657 1 antisense novelGene_MSI2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 35 0 FALSE 0 0 NA A coding 175 525 344 868 PB.2868.1 chr4 + 4073 1 genic_intron novelGene_673 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6912.1 chr12 + 2788 10 novel_not_in_catalog TMEM117 novel NA NA NA NA no_subtype FALSE canonical NA NA 1057 None 2 7 0 TRUE 0 0 NA A coding 514 1542 160 1701 PB.393.1 chr1 + 2554 2 antisense novelGene_USP24_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2265 None 4 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9576.1 chr18 - 1616 11 full-splice_match FECH ENST00000262093.9 3853 11 75 2162 no_subtype FALSE canonical NA NA 144 None 61 4 0 FALSE 0 0 NA A coding 423 1269 78 1346 PB.6414.2 chr11 - 2724 10 novel_in_catalog MEN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 62 None 31 2 0 FALSE 0 0 NA C coding 610 1830 86 1915 PB.6414.3 chr11 - 2952 10 full-splice_match MEN1 ENST00000315422.8 3148 10 184 12 no_subtype FALSE canonical NA NA 290 None 5 6 0 FALSE 0 0 NA C coding 610 1830 314 2143 PB.4199.2 chr6 - 2621 1 novel_in_catalog SYNE1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6414.4 chr11 - 2707 10 novel_not_in_catalog MEN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 44 None 17 3 1 FALSE 0 0 NA C coding 610 1830 68 1897 PB.1150.1 chr1 - 6375 1 novel_in_catalog AKT3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 42 0 FALSE 0 0 NA A coding 112 336 5637 5972 PB.4136.1 chr6 - 1608 7 full-splice_match VNN1 ENST00000367928.4 3106 7 -1 1499 no_subtype FALSE canonical NA NA 225 None 881 0 0 FALSE 0 0 NA C coding 513 1539 16 1554 PB.4136.3 chr6 - 2785 8 novel_not_in_catalog VNN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 225 None 29 9 0 TRUE 0 0 NA C coding 513 1539 16 1554 PB.6912.2 chr12 + 2877 3 genic_intron novelGene_435 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2280 None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4136.5 chr6 - 1521 1 genic VNN1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4136.6 chr6 - 3568 8 novel_not_in_catalog VNN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 225 None 2 19 1 TRUE 0 0 NA C coding 513 1539 16 1554 PB.4896.2 chr8 + 3447 8 incomplete-splice_match AP3M2 ENST00000174653.3 3661 9 209 5 internal_fragment FALSE canonical NA NA 1229 None 10 11 0 FALSE 0 0 NA B coding 418 1254 74 1327 PB.3623.6 chr5 - 2297 1 genic_intron novelGene_1273 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1108.1 chr1 + 4201 17 novel_not_in_catalog GALNT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1540 None 2 22 1 TRUE 0 0 NA B coding 517 1551 44 1594 PB.3623.3 chr5 - 3586 11 full-splice_match RNF145 ENST00000424310.6 3613 11 19 8 no_subtype TRUE canonical NA NA 302 None 3 8 0 FALSE 0 0 NA C coding 663 1989 342 2330 PB.9127.5 chr17 - 2596 11 novel_not_in_catalog DHX58 novel NA NA NA NA no_subtype FALSE canonical NA NA 49 None 4 3 0 FALSE 0 0 NA B coding 585 1755 51 1805 PB.650.1 chr1 - 1446 7 full-splice_match ANP32E ENST00000583931.5 3451 7 43 1962 no_subtype FALSE canonical NA NA 381 None 6 7 0 FALSE 0 0 NA A coding 268 804 328 1131 PB.3772.1 chr6 + 4477 23 novel_not_in_catalog KDM1B novel NA NA NA NA no_subtype FALSE canonical NA NA 2537 None 5 20 0 TRUE 0 0 NA A coding 822 2466 153 2618 PB.9127.1 chr17 - 2419 13 novel_not_in_catalog DHX58 novel NA NA NA NA no_subtype FALSE canonical NA NA 49 None 26 1 0 FALSE 0 0 NA B coding 678 2034 51 2084 PB.9127.2 chr17 - 3839 12 novel_in_catalog DHX58 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 88 None 3 7 0 FALSE 0 0 NA B coding 585 1755 90 1844 PB.10701.1 chr22 + 1854 9 full-splice_match TCN2 ENST00000215838.7 2535 9 455 226 no_subtype TRUE canonical NA NA 1261 None 12 6 0 FALSE 0 0 NA A coding 427 1281 40 1320 PB.8300.4 chr15 + 2831 19 novel_in_catalog FES novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2472 None 17 9 0 FALSE 0 0 NA C coding 822 2466 147 2612 PB.4944.2 chr8 + 5823 1 novel_in_catalog RAB2A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 44 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6120.2 chr11 + 1610 11 novel_not_in_catalog CRACR2B novel NA NA NA NA no_subtype FALSE canonical NA NA 1510 None 2 13 1 TRUE 0 0 NA B coding 302 906 446 1351 PB.6120.1 chr11 + 1546 11 novel_not_in_catalog CRACR2B novel NA NA NA NA no_subtype TRUE canonical NA NA 1441 None 9 12 2 TRUE 0 0 NA B coding 399 1197 86 1282 PB.4806.1 chr8 + 2054 13 novel_not_in_catalog VPS37A novel NA NA NA NA no_subtype FALSE canonical NA NA 1433 None 12 1 0 TRUE 0 0 NA A coding 397 1191 240 1430 PB.7000.1 chr12 + 1484 9 full-splice_match TARBP2 ENST00000266987.6 1867 9 379 4 no_subtype FALSE canonical NA NA 1047 None 4 3 0 FALSE 0 0 NA C coding 366 1098 105 1202 PB.1913.1 chr2 - 3767 1 novel_in_catalog GPR55 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A coding 319 957 137 1093 PB.9696.1 chr19 + 2678 2 antisense novelGene_PTPRS_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2417 None 2 23 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.665.1 chr1 - 3177 12 novel_not_in_catalog ARNT novel NA NA NA NA no_subtype FALSE non_canonical NA NA 30 None 2 11 0 FALSE 0 0 NA C coding 364 1092 168 1259 PB.7058.1 chr12 + 4164 13 full-splice_match MBD6 ENST00000355673.7 4282 13 109 9 no_subtype FALSE canonical NA NA 3184 None 10 9 0 FALSE 0 0 NA A coding 1003 3009 248 3256 PB.5897.1 chr10 + 2463 2 genic_intron novelGene_809 novel NA NA NA NA no_subtype FALSE canonical NA NA 1005 None 3 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8081.1 chr15 + 1658 12 novel_not_in_catalog USP8 novel NA NA NA NA no_subtype FALSE canonical NA NA 1375 None 22 1 1 TRUE 0 0 NA A coding 500 1500 158 1657 PB.6544.1 chr11 - 4198 3 full-splice_match LRRC32 ENST00000260061.9 4207 3 1 8 no_subtype FALSE canonical NA NA 133 None 14 12 0 FALSE 0 0 NA A coding 662 1986 138 2123 PB.9437.1 chr17 + 1841 11 full-splice_match SLC25A10 ENST00000350690.9 1885 11 40 4 no_subtype FALSE canonical NA NA 808 None 12 12 0 FALSE 0 0 NA A coding 287 861 47 907 PB.4740.1 chr7 - 2732 2 antisense novelGene_GIMAP8_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2230 None 11 5 1 FALSE 0 0 NA A coding 157 471 1775 2245 PB.10980.1 chrX + 3657 2 novel_not_in_catalog FAM156B novel NA NA NA NA no_subtype FALSE canonical NA NA 2211 None 15 16 0 FALSE 0 0 NA B coding 213 639 2329 2967 PB.2629.3 chr3 + 5377 32 novel_in_catalog EIF4G1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4762 None 2 3 1 FALSE 0 0 NA B coding 1559 4677 265 4941 PB.658.2 chr1 - 3081 3 novel_not_in_catalog MCL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 166 None 3 24 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.3404.1 chr5 - 1582 2 genic_intron novelGene_974 novel NA NA NA NA no_subtype TRUE canonical NA NA 918 None 2 7 0 FALSE 0 0 NA A coding 86 258 44 301 PB.11110.1 chrX - 3558 13 full-splice_match CAPN6 ENST00000324068.1 3568 13 9 1 no_subtype FALSE canonical NA NA 144 None 4 6 0 FALSE 0 0 NA A coding 641 1923 160 2082 PB.8905.1 chr17 + 1647 6 full-splice_match CD68 ENST00000250092.10 1878 6 224 7 no_subtype FALSE canonical NA NA 918 None 150 6 0 FALSE 0 0 NA A coding 174 522 528 1049 PB.658.4 chr1 - 3459 4 novel_not_in_catalog MCL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 294 None 27 24 1 TRUE 0 0 NA C coding 152 456 201 656 PB.8128.1 chr15 - 3280 2 genic_intron novelGene_579 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 263 None 4 12 1 FALSE 0 0 NA A coding 110 330 762 1091 PB.4064.2 chr6 + 1482 1 genic_intron novelGene_977 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9797.1 chr19 - 1748 1 novel_in_catalog C19orf43 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A coding 158 474 14 487 PB.3399.4 chr5 + 3628 25 novel_not_in_catalog PAM novel NA NA NA NA no_subtype FALSE canonical NA NA 2803 None 2 15 2 FALSE 0 0 NA B coding 792 2376 378 2753 PB.3399.3 chr5 + 3575 24 novel_not_in_catalog PAM novel NA NA NA NA no_subtype FALSE canonical NA NA 2749 None 2 6 1 FALSE 0 0 NA B coding 800 2400 378 2777 PB.10588.1 chr21 + 5995 12 novel_not_in_catalog PDXK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2055 None 5 28 0 TRUE 0 0 NA A coding 312 936 164 1099 PB.3399.1 chr5 + 3658 26 novel_not_in_catalog PAM novel NA NA NA NA no_subtype TRUE canonical NA NA 2839 None 3 9 2 FALSE 0 0 NA B coding 866 2598 418 3015 PB.4522.1 chr7 - 2934 18 full-splice_match SLC25A13 ENST00000265631.9 3136 18 -1 203 no_subtype FALSE canonical NA NA 153 None 2 6 0 FALSE 0 0 NA A coding 675 2025 139 2163 PB.7801.7 chr14 - 3699 13 novel_not_in_catalog NUMB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 177 None 3 18 3 TRUE 0 0 NA C coding 640 1920 420 2339 PB.7801.6 chr14 - 3475 12 novel_not_in_catalog NUMB novel NA NA NA NA no_subtype FALSE canonical NA NA 150 None 2 6 0 TRUE 0 0 NA C coding 592 1776 340 2115 PB.10648.5 chr22 - 5966 51 novel_not_in_catalog PI4KA novel NA NA NA NA no_subtype FALSE canonical NA NA 112 None 4 4 0 TRUE 0 0 NA B coding 1833 5499 131 5629 PB.7106.2 chr12 + 3073 13 novel_not_in_catalog MDM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2660 None 10 14 1 TRUE 0 0 NA B coding 486 1458 319 1776 PB.7801.3 chr14 - 3458 11 full-splice_match NUMB ENST00000554546.5 3607 11 36 113 no_subtype FALSE canonical NA NA 89 None 3 7 1 FALSE 0 0 NA C coding 592 1776 322 2097 PB.10648.2 chr22 - 5660 49 novel_not_in_catalog PI4KA novel NA NA NA NA no_subtype FALSE canonical NA NA 13 None 2 4 0 TRUE 0 0 NA B coding 1747 5241 74 5314 PB.7801.1 chr14 - 3660 13 novel_not_in_catalog NUMB novel NA NA NA NA no_subtype TRUE canonical NA NA 177 None 2 13 1 TRUE 0 0 NA C coding 640 1920 367 2286 PB.8743.2 chr16 - 2851 1 novel_in_catalog FA2H novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA C coding 250 750 66 815 PB.8300.8 chr15 + 3038 18 novel_in_catalog FES novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2685 None 2 1 0 FALSE 0 0 NA C coding 542 1626 51 1676 PB.6567.1 chr11 - 3538 1 incomplete-splice_match RAB30 ENST00000612684.4 9783 5 4412 1834 no_subtype FALSE canonical NA NA NA None 11 26 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8215.1 chr15 - 1599 1 incomplete-splice_match SIN3A ENST00000394947.7 6737 21 5135 4 no_subtype FALSE canonical NA NA NA None 8 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7801.9 chr14 - 3734 13 novel_not_in_catalog NUMB novel NA NA NA NA no_subtype FALSE canonical NA NA 137 None 3 7 0 FALSE 0 0 NA C coding 640 1920 459 2378 PB.7801.8 chr14 - 3537 12 novel_not_in_catalog NUMB novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 3 7 0 FALSE 0 0 NA C coding 592 1776 406 2181 PB.2361.1 chr3 + 3038 10 novel_not_in_catalog HHLA2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2001 None 4 23 0 TRUE 0 0 NA A coding 397 1191 228 1418 PB.1773.1 chr2 - 1170 1 genic_intron novelGene_1363 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA A coding 109 327 42 368 PB.6436.1 chr11 - 1803 1 full-splice_match AP000769.1 ENST00000625158.1 1589 1 794 -1008 no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2136.2 chr3 - 3723 5 novel_not_in_catalog CDCP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 162 None 2 17 1 TRUE 0 0 NA C coding 343 1029 81 1109 PB.198.2 chr1 + 2459 4 antisense novelGene_PTAFR_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2409 None 38 9 3 FALSE 0 0 NA A coding 108 324 1554 1877 PB.5642.1 chr9 - 1418 10 novel_not_in_catalog PNPLA7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 236 None 2 12 0 TRUE 0 0 NA A coding 369 1107 207 1313 PB.4944.1 chr8 - 2674 3 genic_intron novelGene_575 novel NA NA NA NA no_subtype FALSE canonical NA NA 108 None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6772.1 chr12 - 3789 14 full-splice_match C12orf4 ENST00000261250.7 3826 14 2 35 no_subtype FALSE canonical NA NA 61 None 8 9 0 FALSE 0 0 NA A coding 552 1656 87 1742 PB.795.6 chr1 - 3709 3 novel_not_in_catalog CD48 novel NA NA NA NA no_subtype FALSE canonical NA NA 353 None 2 27 1 TRUE 0 0 NA C coding 130 390 3020 3409 PB.2613.1 chr3 + 1405 2 novel_not_in_catalog ATP11B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 43 None 2 5 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.2572.1 chr3 - 3078 10 novel_not_in_catalog LRRC31 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 339 None 11 12 0 TRUE 0 0 NA A coding 552 1656 165 1820 PB.4077.3 chr6 - 2988 6 full-splice_match CD164 ENST00000310786.8 2993 6 -24 29 no_subtype FALSE canonical NA NA 265 None 29 23 0 FALSE 0 0 NA C coding 197 591 91 681 PB.3936.2 chr6 + 2607 10 novel_in_catalog TJAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 815 None 8 10 2 FALSE 0 0 NA B coding 547 1641 267 1907 PB.684.2 chr1 - 3275 3 novel_not_in_catalog S100A10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 35 None 3 20 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.684.3 chr1 - 2791 2 novel_in_catalog S100A10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 35 None 9 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8168.1 chr15 + 4027 1 antisense novelGene_SNAPC5_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 38 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7383.3 chr13 - 2821 9 novel_not_in_catalog ZMYM5 novel NA NA NA NA no_subtype FALSE canonical NA NA 52 None 2 9 0 TRUE 0 0 NA A coding 669 2007 194 2200 PB.662.1 chr1 + 1859 1 genic_intron novelGene_1240 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10223.2 chr20 + 2809 3 novel_not_in_catalog SDCBP2-AS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 282 None 3 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1128.5 chr1 - 2107 17 incomplete-splice_match ARID4B ENST00000491632.5 3823 20 -3 1719 internal_fragment FALSE canonical NA NA 403 None 2 0 0 FALSE 0 0 NA C coding 551 1653 453 2105 PB.10223.1 chr20 + 2733 7 novel_not_in_catalog SDCBP2-AS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 770 None 2 23 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.795.1 chr1 - 1132 4 novel_not_in_catalog CD48 novel NA NA NA NA no_subtype FALSE canonical NA NA 179 None 2 4 0 FALSE 0 0 NA C coding 211 633 194 826 PB.9052.5 chr17 - 3180 1 genic_intron novelGene_324 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 30 24 0 FALSE 0 0 NA A coding 102 306 1560 1865 PB.9052.4 chr17 - 1862 1 genic_intron novelGene_322 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6388.2 chr11 + 2571 2 genic TMEM179B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1007 None 2 12 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.4077.2 chr6 - 3001 5 novel_not_in_catalog CD164 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 297 None 67 25 1 TRUE 0 0 NA C coding 182 546 123 668 PB.9052.3 chr17 - 4028 14 incomplete-splice_match MYO1D ENST00000394649.8 5451 24 1419 4 5prime_fragment FALSE canonical NA NA 42 None 2 25 1 FALSE 0 0 NA B coding 546 1638 242 1879 PB.9052.2 chr17 - 4279 15 incomplete-splice_match MYO1D ENST00000394649.8 5451 24 1168 4 5prime_fragment FALSE canonical NA NA 147 None 4 18 0 FALSE 0 0 NA B coding 697 2091 40 2130 PB.9411.2 chr17 - 5945 21 novel_not_in_catalog USP36 novel NA NA NA NA no_subtype FALSE canonical NA NA 152 None 2 26 2 FALSE 0 0 NA C coding 1124 3372 326 3697 PB.7767.1 chr14 + 3093 11 novel_not_in_catalog FUT8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2419 None 4 8 1 TRUE 0 0 NA B coding 575 1725 659 2383 PB.7815.2 chr14 + 6169 17 incomplete-splice_match YLPM1 ENST00000325680.11 7108 21 14 925 3prime_fragment FALSE canonical NA NA 6140 None 2 3 0 FALSE 0 0 NA C coding 2019 6057 111 6167 PB.9728.2 chr19 + 3339 11 full-splice_match MAP2K7 ENST00000397979.3 3361 11 19 3 no_subtype FALSE canonical NA NA 1160 None 14 16 0 FALSE 0 0 NA C coding 419 1257 36 1292 PB.10660.1 chr22 - 5135 9 novel_not_in_catalog PPM1F novel NA NA NA NA no_subtype TRUE canonical NA NA 46 None 9 20 0 TRUE 0 0 NA B coding 454 1362 107 1468 PB.10660.2 chr22 - 5925 4 novel_not_in_catalog PPM1F novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1184 None 2 36 0 TRUE 0 0 NA B coding 142 426 3425 3850 PB.1924.7 chr2 + 1505 1 genic_intron novelGene_1414 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7498.1 chr13 - 1543 1 genic_intron novelGene_492 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5513.4 chr9 + 1618 1 novel_in_catalog ZBTB43 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9411.9 chr17 - 3357 17 novel_not_in_catalog USP36 novel NA NA NA NA no_subtype FALSE canonical NA NA 92 None 2 2 0 FALSE 0 0 NA C coding 652 1956 1401 3356 PB.6503.3 chr11 + 3420 19 novel_not_in_catalog CTTN novel NA NA NA NA no_subtype FALSE canonical NA NA 1873 None 2 15 0 FALSE 0 0 NA C coding 550 1650 358 2007 PB.6503.2 chr11 + 3221 18 full-splice_match CTTN ENST00000301843.12 3272 18 48 3 no_subtype FALSE canonical NA NA 1674 None 73 16 0 FALSE 0 0 NA C coding 550 1650 159 1808 PB.5704.1 chr10 + 3705 14 novel_not_in_catalog MLLT10 novel NA NA NA NA no_subtype FALSE canonical NA NA 2017 None 2 14 0 FALSE 0 0 NA A coding 481 1443 430 1872 PB.10694.5 chr22 + 3110 5 genic_intron novelGene_285 novel NA NA NA NA no_subtype FALSE canonical NA NA 1918 None 2 25 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7468.1 chr13 - 2543 6 novel_in_catalog ZC3H13 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 652 None 3 8 0 FALSE 0 0 NA B coding 486 1458 406 1863 PB.6374.1 chr11 - 6007 1 incomplete-splice_match AHNAK ENST00000378024.8 18787 5 12766 15 no_subtype FALSE canonical NA NA NA None 91 7 0 FALSE 0 0 NA C coding 1703 5109 72 5180 PB.7749.1 chr14 + 3877 15 full-splice_match HIF1A ENST00000337138.8 3919 15 34 8 no_subtype FALSE canonical NA NA 2560 None 90 9 0 FALSE 0 0 NA C coding 826 2478 232 2709 PB.5591.1 chr9 - 3124 11 full-splice_match TTF1 ENST00000334270.2 3052 11 -6 -66 no_subtype FALSE canonical NA NA 39 None 3 5 0 FALSE 0 0 NA A coding 905 2715 47 2761 PB.9076.1 chr17 + 2667 5 full-splice_match MRM1 ENST00000614766.4 1857 5 58 -868 no_subtype FALSE canonical NA NA 1070 None 2 10 0 FALSE 0 0 NA A coding 353 1059 182 1240 PB.8507.1 chr16 - 2613 2 genic_intron novelGene_225 novel NA NA NA NA no_subtype FALSE canonical NA NA 38 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2375.3 chr3 - 3223 8 full-splice_match CCDC80 ENST00000439685.6 3557 8 167 167 no_subtype FALSE canonical NA NA 210 None 2 1 0 FALSE 0 0 NA C coding 946 2838 234 3071 PB.1748.1 chr2 + 3831 2 novel_not_in_catalog C2orf88 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 56 None 16 32 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.2375.1 chr3 - 3727 8 full-splice_match CCDC80 ENST00000206423.7 12430 8 229 8474 no_subtype TRUE canonical NA NA 714 None 43 2 0 FALSE 0 0 NA C coding 946 2838 738 3575 PB.8507.5 chr16 - 1483 1 antisense novelGene_PRKCB_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2375.4 chr3 - 1681 1 novel_in_catalog CCDC80 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 7 1 0 FALSE 0 0 NA C coding 535 1605 76 1680 PB.2375.5 chr3 - 2102 2 incomplete-splice_match CCDC80 ENST00000206423.7 12430 8 488 9840 internal_fragment FALSE canonical NA NA 455 None 2 1 0 FALSE 0 0 NA C coding 535 1605 497 2101 PB.9360.1 chr17 + 2066 19 full-splice_match NUP85 ENST00000245544.8 2121 19 52 3 no_subtype FALSE canonical NA NA 1888 None 23 2 0 FALSE 0 0 NA C coding 656 1968 20 1987 PB.3590.1 chr5 + 2376 5 novel_not_in_catalog GM2A novel NA NA NA NA no_subtype FALSE canonical NA NA 2146 None 14 10 1 TRUE 0 0 NA B coding 190 570 32 601 PB.10781.1 chr22 + 1698 13 full-splice_match ADSL ENST00000623063.3 4359 13 40 2621 no_subtype FALSE canonical NA NA 1387 None 48 4 0 FALSE 0 0 NA A coding 484 1452 20 1471 PB.9360.2 chr17 + 2786 17 novel_in_catalog NUP85 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1667 None 2 8 0 FALSE 0 0 NA C coding 630 1890 53 1942 PB.11177.1 chrX - 2789 6 novel_in_catalog ARHGEF6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 179 None 2 9 0 FALSE 0 0 NA B coding 271 813 15 827 PB.6380.2 chr11 - 1417 5 novel_not_in_catalog B3GAT3 novel NA NA NA NA no_subtype FALSE canonical NA NA 90 None 2 2 0 FALSE 0 0 NA C coding 129 387 627 1013 PB.8668.1 chr16 - 1461 6 novel_not_in_catalog TRADD novel NA NA NA NA no_subtype TRUE canonical NA NA 73 None 39 9 0 TRUE 0 0 NA A coding 312 936 82 1017 PB.7709.1 chr14 - 2971 8 novel_not_in_catalog GNPNAT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 180 None 3 26 1 TRUE 0 0 NA B coding 184 552 195 746 PB.7709.2 chr14 - 1638 7 novel_not_in_catalog GNPNAT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 8 15 0 TRUE 0 0 NA B coding 184 552 86 637 PB.7709.3 chr14 - 3111 1 novel_in_catalog GNPNAT1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 7 25 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2595.2 chr3 + 4112 25 novel_not_in_catalog ECT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2793 None 6 16 1 FALSE 0 0 NA C coding 547 1641 1240 2880 PB.7749.2 chr14 + 3830 14 novel_in_catalog HIF1A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2511 None 3 7 0 FALSE 0 0 NA C coding 785 2355 306 2660 PB.5832.8 chr10 - 2953 15 novel_not_in_catalog PSAP novel NA NA NA NA no_subtype FALSE canonical NA NA 68 None 2 4 0 FALSE 0 0 NA B coding 449 1347 465 1811 PB.2595.1 chr3 + 4044 24 full-splice_match ECT2 ENST00000232458.9 4087 24 34 9 no_subtype FALSE canonical NA NA 2726 None 3 10 1 FALSE 0 0 NA C coding 883 2649 165 2813 PB.758.3 chr1 - 5257 5 novel_not_in_catalog ETV3 novel NA NA NA NA no_subtype FALSE canonical NA NA 64 None 5 31 0 FALSE 0 0 NA C coding 512 1536 75 1610 PB.432.1 chr1 + 1965 13 novel_not_in_catalog CTH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1939 None 4 7 0 TRUE 0 0 NA A coding 405 1215 203 1417 PB.3979.3 chr6 + 2773 2 novel_not_in_catalog PTP4A1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2649 None 7 22 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.8664.1 chr16 + 2623 13 novel_not_in_catalog CES2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2162 None 4 9 2 TRUE 0 0 NA B coding 448 1344 1003 2346 PB.6380.1 chr11 - 1441 5 full-splice_match B3GAT3 ENST00000265471.9 1641 5 191 9 no_subtype FALSE canonical NA NA 119 None 7 4 0 FALSE 0 0 NA C coding 335 1005 38 1042 PB.7741.1 chr14 - 2588 2 genic_intron novelGene_573 novel NA NA NA NA no_subtype TRUE canonical NA NA 955 None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4645.1 chr7 + 3293 7 full-splice_match CALU ENST00000249364.8 3357 7 62 2 no_subtype FALSE canonical NA NA 883 None 51 14 0 FALSE 0 0 NA C coding 315 945 41 985 PB.4645.2 chr7 + 3293 7 full-splice_match CALU ENST00000449187.6 2438 7 41 -896 no_subtype FALSE canonical NA NA 883 None 9 14 0 FALSE 0 0 NA C coding 315 945 41 985 PB.9600.1 chr18 - 2687 1 novel_in_catalog RTTN novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA A coding 181 543 31 573 PB.9612.2 chr18 + 2839 3 novel_not_in_catalog RP11-862L9.3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1050 None 2 20 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.3979.1 chr6 + 4314 6 full-splice_match PTP4A1 ENST00000370651.5 5088 6 557 217 no_subtype FALSE canonical NA NA 1000 None 9 26 0 FALSE 0 0 NA C coding 173 519 597 1115 PB.1104.3 chr1 - 2774 18 novel_in_catalog NUP133 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 291 None 3 0 0 FALSE 0 0 NA C coding 871 2613 110 2722 PB.3646.23 chr5 - 1867 1 genic UBTD2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3646.22 chr5 - 2527 2 genic_intron novelGene_1317 novel NA NA NA NA no_subtype FALSE canonical NA NA 2478 None 5 25 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4981.1 chr8 + 3876 6 full-splice_match PI15 ENST00000260113.6 6732 6 -3 2859 no_subtype FALSE canonical NA NA 823 None 2 13 0 FALSE 0 0 NA A coding 258 774 183 956 PB.9028.1 chr17 + 1426 4 novel_not_in_catalog CPD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1192 None 2 5 0 TRUE 0 0 NA B coding 363 1089 9 1097 PB.5022.1 chr8 - 3158 1 incomplete-splice_match TP53INP1 ENST00000448464.6 5631 5 2471 3 no_subtype FALSE canonical NA NA NA None 10 27 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3881.1 chr6 - 1672 8 full-splice_match ETV7 ENST00000340181.8 1719 8 43 4 no_subtype FALSE canonical NA NA 205 None 6 6 0 FALSE 0 0 NA A coding 325 975 248 1222 PB.5022.3 chr8 - 5626 5 full-splice_match TP53INP1 ENST00000448464.6 5631 5 2 3 no_subtype FALSE canonical NA NA 211 None 13 44 1 FALSE 0 0 NA C coding 164 492 362 853 PB.5022.4 chr8 - 5755 5 novel_not_in_catalog TP53INP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 212 None 6 45 0 FALSE 0 0 NA C coding 240 720 529 1248 PB.5022.5 chr8 - 5589 4 full-splice_match TP53INP1 ENST00000342697.4 5638 4 47 2 no_subtype FALSE canonical NA NA 211 None 2 43 0 FALSE 0 0 NA C coding 240 720 362 1081 PB.8777.1 chr16 + 3188 27 full-splice_match ATP2C2 ENST00000262429.8 3376 27 6 182 no_subtype FALSE canonical NA NA 2805 None 43 5 1 FALSE 0 0 NA A coding 946 2838 84 2921 PB.9048.1 chr17 - 3510 3 antisense novelGene_ZNF207_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3468 None 13 27 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.9048.2 chr17 - 3255 1 antisense novelGene_ZNF207_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 12 29 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9887.1 chr19 + 531 5 full-splice_match UBA52 ENST00000442744.6 2845 5 -1 2315 no_subtype FALSE canonical NA NA 352 None 4 1 1 FALSE 0 0 NA A coding 128 384 60 443 PB.6302.4 chr11 + 1390 1 incomplete-splice_match ATG13 ENST00000524625.5 4014 17 2619 6 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3900.2 chr6 - 5492 12 novel_not_in_catalog BTBD9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 72 None 2 37 1 TRUE 0 0 NA A coding 612 1836 100 1935 PB.9235.1 chr17 + 3323 19 incomplete-splice_match ABCC3 ENST00000285238.12 5716 31 1835 558 internal_fragment FALSE canonical NA NA 2720 None 2 10 2 FALSE 0 0 NA A coding 850 2550 277 2826 PB.6302.1 chr11 + 4005 17 full-splice_match ATG13 ENST00000524625.5 4014 17 5 4 no_subtype TRUE canonical NA NA 1743 None 28 13 0 FALSE 0 0 NA C coding 480 1440 379 1818 PB.1462.3 chr2 - 3030 6 full-splice_match CHMP3 ENST00000409810.6 559 6 21 -2492 no_subtype FALSE canonical NA NA 39 None 3 18 0 FALSE 0 0 NA C coding 208 624 37 660 PB.3760.2 chr6 - 3489 1 genic_intron novelGene_140 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1041.1 chr1 + 1934 6 novel_not_in_catalog ATF3 novel NA NA NA NA no_subtype FALSE canonical NA NA 525 None 13 4 0 TRUE 0 0 NA B coding 181 543 175 717 PB.11206.28 chrX - 7006 40 novel_not_in_catalog FLNA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 41 None 2 5 1 TRUE 0 0 NA C coding 2190 6570 117 6686 PB.4063.1 chr6 + 1675 2 genic_intron novelGene_975 novel NA NA NA NA no_subtype FALSE canonical NA NA 1623 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1041.2 chr1 + 1505 1 novel_in_catalog ATF3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 2 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2677.1 chr3 + 5719 1 antisense novelGene_ACAP2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 58 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1845.16 chr2 - 7947 46 full-splice_match FN1 ENST00000446046.5 7952 46 0 5 no_subtype FALSE canonical NA NA 414 None 2 7 0 FALSE 0 0 NA C coding 2330 6990 267 7256 PB.2677.4 chr3 + 2765 2 antisense novelGene_ACAP2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1828 None 5 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6716.1 chr11 - 3744 18 full-splice_match ROBO4 ENST00000306534.7 4710 18 435 531 no_subtype FALSE canonical NA NA 121 None 10 2 0 FALSE 0 0 NA A coding 1007 3021 52 3072 PB.1108.3 chr1 + 3560 2 genic_intron novelGene_1409 novel NA NA NA NA no_subtype FALSE canonical NA NA 2272 None 2 19 1 FALSE 0 0 NA A coding 106 318 1048 1365 PB.8716.1 chr16 - 3287 21 full-splice_match AARS ENST00000261772.12 3477 21 64 126 no_subtype FALSE canonical NA NA 59 None 136 2 0 FALSE 0 0 NA A coding 968 2904 81 2984 PB.2.1 chr1 + 626 2 full-splice_match ISG15 ENST00000379389.4 711 2 80 5 no_subtype FALSE canonical NA NA 74 None 2 2 0 FALSE 0 0 NA A coding 165 495 72 566 PB.1810.1 chr2 + 1616 2 novel_not_in_catalog CD28 novel NA NA NA NA no_subtype FALSE canonical NA NA 252 None 9 14 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.10687.11 chr22 - 1936 13 novel_not_in_catalog AP1B1 novel NA NA NA NA no_subtype FALSE canonical NA NA 142 None 2 3 0 TRUE 0 0 NA B coding 484 1452 170 1621 PB.491.1 chr1 - 3253 1 antisense novelGene_MTF2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 32 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4498.2 chr7 - 1578 3 full-splice_match MTERF1 ENST00000351870.7 1997 3 6 413 no_subtype FALSE canonical NA NA 58 None 5 2 0 FALSE 0 0 NA C coding 399 1197 89 1285 PB.4498.3 chr7 - 1582 3 novel_not_in_catalog MTERF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 63 None 3 0 0 FALSE 0 0 NA C coding 399 1197 94 1290 PB.4257.1 chr6 + 3075 13 novel_not_in_catalog FAM120B novel NA NA NA NA no_subtype FALSE canonical NA NA 2762 None 56 3 0 TRUE 0 0 NA B coding 886 2658 91 2748 PB.4257.3 chr6 + 3073 13 novel_not_in_catalog FAM120B novel NA NA NA NA no_subtype TRUE canonical NA NA 2758 None 2 10 1 TRUE 0 0 NA B coding 874 2622 123 2744 PB.4257.2 chr6 + 2868 12 novel_not_in_catalog FAM120B novel NA NA NA NA no_subtype FALSE canonical NA NA 2555 None 22 3 0 TRUE 0 0 NA B coding 817 2451 91 2541 PB.4257.4 chr6 + 3162 11 novel_not_in_catalog FAM120B novel NA NA NA NA no_subtype TRUE canonical NA NA 2640 None 2 14 0 TRUE 0 0 NA B coding 855 2565 110 2674 PB.4257.7 chr6 + 3120 15 novel_not_in_catalog FAM120B novel NA NA NA NA no_subtype TRUE canonical NA NA 2806 None 2 5 0 TRUE 0 0 NA B coding 886 2658 135 2792 PB.4257.6 chr6 + 3236 12 novel_not_in_catalog FAM120B novel NA NA NA NA no_subtype FALSE canonical NA NA 2714 None 2 8 0 TRUE 0 0 NA B coding 886 2658 91 2748 PB.10794.1 chr22 - 980 5 novel_not_in_catalog PHF5A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 75 None 7 8 1 TRUE 0 0 NA A coding 110 330 24 353 PB.1399.2 chr2 + 1532 3 novel_in_catalog MXD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 390 None 15 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3228.1 chr5 + 5226 7 novel_not_in_catalog C5orf51 novel NA NA NA NA no_subtype FALSE canonical NA NA 4348 None 3 27 1 TRUE 0 0 NA A coding 294 882 23 904 PB.1108.2 chr1 + 4415 17 novel_not_in_catalog GALNT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1599 None 10 12 0 TRUE 0 0 NA B coding 571 1713 40 1752 PB.6617.9 chr11 - 1367 12 novel_not_in_catalog CASP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 49 None 2 2 0 TRUE 0 0 NA C coding 404 1212 43 1254 PB.10228.12 chr20 - 1418 8 novel_not_in_catalog SIRPB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 133 None 7 9 3 TRUE 0 0 NA B coding 268 804 347 1150 PB.6822.1 chr12 + 1424 7 novel_not_in_catalog CLEC12A novel NA NA NA NA no_subtype FALSE canonical NA NA 701 None 3 4 0 FALSE 0 0 NA A coding 191 573 283 855 PB.2734.2 chr4 + 1927 2 genic_intron novelGene_46 novel NA NA NA NA no_subtype TRUE canonical NA NA 1865 None 2 9 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7512.1 chr13 - 4122 26 novel_not_in_catalog DIAPH3 novel NA NA NA NA no_subtype TRUE canonical NA NA 43 None 2 19 1 TRUE 0 0 NA A coding 1009 3027 101 3127 PB.2472.1 chr3 - 6854 1 genic_intron novelGene_1136 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 66 0 FALSE 0 0 NA A coding 100 300 5471 5770 PB.6617.3 chr11 - 1517 12 novel_not_in_catalog CASP1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 33 None 3 1 0 TRUE 0 0 NA C coding 404 1212 27 1238 PB.8419.1 chr16 - 1473 11 novel_not_in_catalog ROGDI novel NA NA NA NA no_subtype FALSE canonical NA NA 163 None 21 6 1 FALSE 0 0 NA B coding 286 858 119 976 PB.6617.1 chr11 - 1348 11 fusion CARD16,CASP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 35 None 10 2 0 TRUE 0 0 NA B coding 404 1212 29 1240 PB.5598.1 chr9 - 3503 19 novel_not_in_catalog RALGDS novel NA NA NA NA no_subtype FALSE canonical NA NA 191 None 16 8 0 TRUE 0 0 NA B coding 897 2691 60 2750 PB.6617.7 chr11 - 1369 10 full-splice_match CASP1 ENST00000436863.7 1477 10 93 15 no_subtype FALSE canonical NA NA 51 None 9 3 0 FALSE 0 0 NA C coding 404 1212 45 1256 PB.6617.5 chr11 - 3077 9 novel_not_in_catalog CASP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 33 None 2 10 1 TRUE 0 0 NA C coding 194 582 1748 2329 PB.6617.4 chr11 - 1486 11 fusion CARD16,CASP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 45 None 4 4 0 TRUE 0 0 NA B coding 404 1212 39 1250 PB.2831.1 chr4 - 3704 24 novel_not_in_catalog NFXL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 52 None 2 13 0 TRUE 0 0 NA A coding 911 2733 55 2787 PB.3387.3 chr5 + 2903 32 novel_not_in_catalog CAST novel NA NA NA NA no_subtype FALSE canonical NA NA 2488 None 4 5 0 TRUE 0 0 NA B coding 769 2307 156 2462 PB.8533.3 chr16 + 1949 13 full-splice_match SPNS1 ENST00000565975.5 1979 13 21 9 no_subtype FALSE canonical NA NA 1614 None 2 0 0 FALSE 0 0 NA C coding 528 1584 123 1706 PB.3387.6 chr5 + 2676 3 genic_intron novelGene_881 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2017 None 2 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3387.4 chr5 + 2964 32 novel_not_in_catalog CAST novel NA NA NA NA no_subtype FALSE canonical NA NA 2374 None 32 4 0 TRUE 0 0 NA B coding 754 2262 87 2348 PB.8533.4 chr16 + 2183 12 full-splice_match SPNS1 ENST00000311008.15 2208 12 18 7 no_subtype FALSE canonical NA NA 1851 None 2 5 0 FALSE 0 0 NA C coding 528 1584 360 1943 PB.5257.1 chr9 + 1721 9 full-splice_match DNAJA1 ENST00000330899.4 2381 9 65 595 no_subtype FALSE canonical NA NA 1093 None 142 2 0 FALSE 0 0 NA A coding 397 1191 119 1309 PB.9241.1 chr17 + 690 5 full-splice_match NME2 ENST00000512737.5 826 5 128 8 no_subtype FALSE canonical NA NA 437 None 3 0 0 FALSE 0 0 NA A coding 152 456 97 552 PB.11180.1 chrX - 2783 2 genic ATP11C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2661 None 3 17 1 TRUE 0 0 NA B coding 106 318 1093 1410 PB.7959.64 chr14 - 1492 8 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 83 None 2 12 4 TRUE 0 0 NA B coding 149 447 17 463 PB.2012.6 chr3 - 6991 3 genic_intron novelGene_104 novel NA NA NA NA no_subtype FALSE canonical NA NA 2123 None 2 40 2 FALSE 0 0 NA A coding 111 333 4228 4560 PB.6350.8 chr11 + 2546 7 novel_not_in_catalog MS4A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 742 None 2 10 2 FALSE 0 0 NA B coding 149 447 512 958 PB.3499.1 chr5 - 2739 17 novel_not_in_catalog KLHL3 novel NA NA NA NA no_subtype TRUE canonical NA NA 174 None 7 6 1 TRUE 0 0 NA A coding 587 1761 161 1921 PB.8613.2 chr16 + 2530 1 genic_intron novelGene_529 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6571.1 chr11 - 1583 10 novel_not_in_catalog CCDC90B novel NA NA NA NA no_subtype FALSE canonical NA NA 489 None 3 4 0 TRUE 0 0 NA A coding 254 762 390 1151 PB.2155.1 chr3 - 1442 1 genic_intron novelGene_467 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9166.9 chr17 - 3036 20 novel_not_in_catalog UBTF novel NA NA NA NA no_subtype FALSE canonical NA NA 141 None 2 9 0 FALSE 0 0 NA C coding 727 2181 209 2389 PB.10508.1 chr21 - 1661 1 genic_intron novelGene_245 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2510.3 chr3 + 3693 16 full-splice_match PLS1 ENST00000337777.7 3755 16 62 0 no_subtype FALSE canonical NA NA 1905 None 6 18 0 FALSE 0 0 NA C coding 629 1887 152 2038 PB.7713.2 chr14 - 1380 5 full-splice_match CNIH1 ENST00000216416.8 4793 5 40 3373 no_subtype FALSE canonical NA NA 145 None 19 5 0 FALSE 0 0 NA C coding 144 432 65 496 PB.9166.5 chr17 - 3037 20 full-splice_match UBTF ENST00000343638.9 4684 20 84 1563 no_subtype FALSE canonical NA NA 140 None 19 9 1 FALSE 0 0 NA C coding 727 2181 208 2388 PB.9166.4 chr17 - 3333 20 novel_in_catalog UBTF novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 436 None 4 5 0 FALSE 0 0 NA C coding 727 2181 504 2684 PB.9166.7 chr17 - 2949 20 full-splice_match UBTF ENST00000393606.7 2683 20 252 -518 no_subtype FALSE canonical NA NA 54 None 14 14 2 FALSE 0 0 NA C coding 727 2181 122 2302 PB.9166.6 chr17 - 2939 22 novel_not_in_catalog UBTF novel NA NA NA NA no_subtype FALSE non_canonical NA NA 33 None 3 7 2 TRUE 0 0 NA C coding 727 2181 110 2290 PB.10888.1 chrX + 1473 11 full-splice_match PDHA1 ENST00000422285.6 3310 11 -3 1840 no_subtype FALSE canonical NA NA 1116 None 47 5 0 FALSE 0 0 NA A coding 390 1170 109 1278 PB.9166.3 chr17 - 3121 21 novel_in_catalog UBTF novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 115 None 7 7 0 FALSE 0 0 NA C coding 764 2292 183 2474 PB.9166.2 chr17 - 2943 20 novel_not_in_catalog UBTF novel NA NA NA NA no_subtype TRUE non_canonical NA NA 42 None 5 7 1 TRUE 0 0 NA C coding 727 2181 112 2292 PB.7920.1 chr14 - 4417 2 genic AL157871.2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1693 None 2 31 0 TRUE 0 0 NA A coding 121 363 1174 1536 PB.1379.1 chr2 - 5924 2 antisense novelGene_AC007386.4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 4337 None 2 40 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.69 chr14 - 1487 8 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 85 None 2 14 4 TRUE 0 0 NA B coding 289 867 40 906 PB.4247.1 chr6 - 1036 8 full-splice_match SFT2D1 ENST00000361731.3 1079 8 29 14 no_subtype FALSE canonical NA NA 144 None 4 4 0 FALSE 0 0 NA C coding 159 477 82 558 PB.8794.1 chr16 - 2886 1 genic_intron novelGene_779 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1531.1 chr2 - 1854 16 novel_not_in_catalog UXS1 novel NA NA NA NA no_subtype TRUE canonical NA NA 156 None 2 4 0 TRUE 0 0 NA B coding 235 705 437 1141 PB.9844.1 chr19 + 1834 3 genic_intron novelGene_139 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 303 None 2 9 1 FALSE 0 0 NA A coding 109 327 1191 1517 PB.6142.2 chr11 + 2701 3 antisense novelGene_NAP1L4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2398 None 3 17 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.5348.1 chr9 + 3643 1 incomplete-splice_match NTRK2 ENST00000359847.3 6646 12 3000 4 no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6142.1 chr11 - 2463 16 full-splice_match NAP1L4 ENST00000380542.8 2511 16 51 -3 no_subtype FALSE canonical NA NA 73 None 3 9 0 FALSE 0 0 NA C coding 375 1125 91 1215 PB.5473.2 chr9 - 5795 38 novel_not_in_catalog CDK5RAP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 235 None 2 3 0 FALSE 0 0 NA B coding 1860 5580 180 5759 PB.5473.3 chr9 + 2663 3 antisense novelGene_MEGF9_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 173 None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5473.1 chr9 - 5877 39 novel_not_in_catalog CDK5RAP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 220 None 8 0 0 FALSE 0 0 NA B coding 1892 5676 165 5840 PB.3821.1 chr6 - 974 6 full-splice_match CLIC1 ENST00000375784.7 1254 6 252 28 no_subtype FALSE canonical NA NA 54 None 31 0 0 FALSE 0 0 NA A coding 241 723 16 738 PB.4784.1 chr8 - 5519 10 novel_not_in_catalog SGK223 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 119 None 2 14 2 TRUE 0 0 NA B coding 1383 4149 954 5102 PB.9670.1 chr19 - 1634 6 novel_not_in_catalog DOHH novel NA NA NA NA no_subtype TRUE non_canonical NA NA 128 None 30 4 0 TRUE 0 0 NA A coding 302 906 201 1106 PB.4784.3 chr8 - 3096 5 novel_not_in_catalog SGK223 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 119 None 3 32 1 TRUE 0 0 NA B coding 721 2163 207 2369 PB.3159.1 chr5 + 1106 6 full-splice_match PDCD6 ENST00000264933.8 1135 6 25 4 no_subtype FALSE canonical NA NA 552 None 5 2 0 FALSE 0 0 NA C coding 191 573 76 648 PB.4686.5 chr7 + 1423 1 incomplete-splice_match CALD1 ENST00000361901.6 4114 14 2685 7 no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3159.2 chr5 + 1100 6 full-splice_match PDCD6 ENST00000507528.5 1088 6 -11 -1 no_subtype FALSE canonical NA NA 546 None 2 2 0 FALSE 0 0 NA C coding 189 567 76 642 PB.7097.1 chr12 + 3811 13 full-splice_match HELB ENST00000247815.8 12866 13 44 9011 no_subtype FALSE canonical NA NA 3177 None 2 5 0 FALSE 0 0 NA A coding 1087 3261 16 3276 PB.5368.1 chr9 - 1703 3 novel_not_in_catalog OMD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 141 None 2 9 1 FALSE 0 0 NA A coding 421 1263 157 1419 PB.4686.2 chr7 + 1443 5 incomplete-splice_match CALD1 ENST00000361675.6 3612 15 -13 2182 3prime_fragment FALSE canonical NA NA 460 None 2 3 0 FALSE 0 0 NA C coding 400 1200 243 1442 PB.10479.2 chr20 + 1494 5 full-splice_match GID8 ENST00000266069.4 4397 5 65 2838 no_subtype FALSE canonical NA NA 595 None 14 6 0 FALSE 0 0 NA C coding 228 684 83 766 PB.10019.12 chr19 + 3255 29 novel_not_in_catalog ARHGEF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2915 None 2 4 1 FALSE 0 0 NA C coding 824 2472 114 2585 PB.1825.7 chr2 + 5687 2 novel_not_in_catalog CREB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4132 None 2 36 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.4878.2 chr8 + 4184 6 novel_not_in_catalog BAG4 novel NA NA NA NA no_subtype FALSE canonical NA NA 900 None 5 13 1 TRUE 0 0 NA B coding 456 1368 16 1383 PB.7170.1 chr12 + 3399 13 novel_not_in_catalog METAP2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3055 None 2 13 1 TRUE 0 0 NA C coding 478 1434 80 1513 PB.1825.3 chr2 + 2742 8 full-splice_match CREB1 ENST00000353267.7 7588 8 98 4748 no_subtype FALSE canonical NA NA 972 None 12 11 0 FALSE 0 0 NA C coding 325 975 140 1114 PB.1825.2 chr2 + 2635 9 full-splice_match CREB1 ENST00000432329.6 7650 9 65 4950 no_subtype FALSE canonical NA NA 1067 None 7 12 2 FALSE 0 0 NA C coding 339 1017 193 1209 PB.6963.1 chr12 + 2879 8 full-splice_match GPD1 ENST00000301149.7 3082 8 191 12 no_subtype TRUE canonical NA NA 994 None 8 6 0 FALSE 0 0 NA A coding 349 1047 42 1088 PB.6035.1 chr10 + 1551 1 incomplete-splice_match NHLRC2 ENST00000369301.3 11051 11 9495 6 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10984.4 chrX - 2625 16 incomplete-splice_match SMC1A ENST00000322213.8 9784 25 27 7132 internal_fragment FALSE canonical NA NA 210 None 12 1 0 FALSE 0 0 NA C coding 841 2523 102 2624 PB.9733.1 chr19 + 1864 7 full-splice_match ANGPTL4 ENST00000301455.6 1879 7 11 4 no_subtype FALSE canonical NA NA 1199 None 9 4 0 FALSE 0 0 NA A coding 406 1218 161 1378 PB.3474.2 chr5 + 2589 6 novel_in_catalog HSPA4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 753 None 2 13 0 FALSE 0 0 NA C coding 235 705 225 929 PB.3474.1 chr5 + 4374 19 full-splice_match HSPA4 ENST00000304858.6 4825 19 88 363 no_subtype FALSE canonical NA NA 2520 None 125 6 0 FALSE 0 0 NA C coding 840 2520 202 2721 PB.1669.1 chr2 - 3585 16 full-splice_match IFIH1 ENST00000263642.2 3595 16 5 5 no_subtype FALSE canonical NA NA 844 None 85 2 0 FALSE 0 0 NA C coding 1025 3075 392 3466 PB.1531.3 chr2 - 1691 18 novel_not_in_catalog UXS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 152 None 2 6 0 TRUE 0 0 NA B coding 420 1260 59 1318 PB.4878.1 chr8 + 1846 7 novel_not_in_catalog BAG4 novel NA NA NA NA no_subtype FALSE canonical NA NA 891 None 3 1 0 TRUE 0 0 NA B coding 457 1371 4 1374 PB.4085.1 chr6 + 788 6 full-splice_match GTF3C6 ENST00000329970.7 952 6 143 21 no_subtype FALSE canonical NA NA 428 None 2 2 0 FALSE 0 0 NA A coding 213 639 68 706 PB.9142.1 chr17 - 2731 5 novel_not_in_catalog RAMP2-AS1 novel NA NA NA NA no_subtype TRUE canonical NA NA 145 None 2 13 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.253.1 chr1 - 827 6 full-splice_match PSMB2 ENST00000373237.3 2701 6 318 1556 no_subtype FALSE canonical NA NA 185 None 2 2 0 FALSE 0 0 NA A coding 201 603 95 697 PB.7487.1 chr13 - 1940 1 antisense novelGene_FNDC3A_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7639.2 chr14 - 2858 7 novel_not_in_catalog RIPK3 novel NA NA NA NA no_subtype FALSE canonical NA NA 522 None 2 12 1 TRUE 0 0 NA C coding 118 354 551 904 PB.2695.1 chr3 + 3376 9 full-splice_match FYTTD1 ENST00000241502.8 6866 9 205 3285 no_subtype FALSE canonical NA NA 875 None 89 15 0 FALSE 0 0 NA A coding 318 954 18 971 PB.1527.1 chr2 - 2992 8 novel_not_in_catalog MFSD9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 223 None 2 21 1 TRUE 0 0 NA A coding 474 1422 59 1480 PB.10984.1 chrX - 5400 25 full-splice_match SMC1A ENST00000322213.8 9784 25 75 4309 no_subtype TRUE canonical NA NA 162 None 50 4 0 FALSE 0 0 NA C coding 1233 3699 54 3752 PB.122.3 chr1 - 2784 1 genic_intron novelGene_211 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8459.14 chr16 - 1561 5 incomplete-splice_match MYH11 ENST00000396324.7 6847 42 5314 -28 5prime_fragment FALSE canonical NA NA 90 None 3 7 0 FALSE 0 0 NA C coding 221 663 49 711 PB.8459.17 chr16 - 3972 21 novel_not_in_catalog MYH11 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 66 None 2 10 2 TRUE 0 0 NA C coding 1062 3186 49 3234 PB.3545.13 chr5 - 1570 1 antisense novelGene_CTD-2024I7.13_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8459.19 chr16 - 6909 42 full-splice_match MYH11 ENST00000576790.6 6272 42 6 -643 no_subtype FALSE canonical NA NA 87 None 2 12 1 FALSE 0 0 NA C coding 1938 5814 105 5918 PB.3461.3 chr5 - 2625 13 incomplete-splice_match FNIP1 ENST00000307968.11 6388 17 -87 3850 internal_fragment FALSE canonical NA NA 179 None 2 2 0 FALSE 0 0 NA B coding 846 2538 88 2625 PB.5243.1 chr9 - 2840 3 novel_not_in_catalog CDKN2B novel NA NA NA NA no_subtype FALSE canonical NA NA 508 None 43 15 0 TRUE 0 0 NA A coding 131 393 374 766 PB.8779.1 chr16 - 1809 4 full-splice_match COTL1 ENST00000262428.4 1843 4 17 17 no_subtype FALSE canonical NA NA 223 None 302 2 0 FALSE 0 0 NA C coding 142 426 147 572 PB.8779.6 chr16 - 2082 3 novel_in_catalog COTL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 578 None 5 5 0 FALSE 0 0 NA C coding 73 219 626 844 PB.8779.7 chr16 - 1580 3 novel_not_in_catalog COTL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 77 None 2 2 0 FALSE 0 0 NA C coding 98 294 50 343 PB.8684.1 chr16 + 4756 29 full-splice_match EDC4 ENST00000358933.9 4800 29 40 4 no_subtype FALSE canonical NA NA 4212 None 3 5 0 FALSE 0 0 NA A coding 1401 4203 200 4402 PB.4334.1 chr7 - 1464 3 full-splice_match CYCS ENST00000409409.5 974 3 -11 -479 no_subtype FALSE canonical NA NA 265 None 4 6 0 FALSE 0 0 NA C coding 105 315 274 588 PB.10683.1 chr22 + 3904 5 full-splice_match CCDC117 ENST00000249064.8 3985 5 78 3 no_subtype FALSE canonical NA NA 700 None 18 24 0 FALSE 0 0 NA A coding 279 837 99 935 PB.5219.3 chr9 + 3030 2 genic_intron novelGene_41 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 173 None 2 23 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4334.2 chr7 - 1329 3 full-splice_match CYCS ENST00000305786.6 4098 3 25 2744 no_subtype FALSE canonical NA NA 137 None 11 6 0 FALSE 0 0 NA C coding 105 315 146 460 PB.4261.2 chr7 + 4334 22 novel_in_catalog SUN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2658 None 30 11 0 FALSE 0 0 NA C coding 916 2748 25 2772 PB.4261.3 chr7 + 4303 22 novel_not_in_catalog SUN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2625 None 2 16 1 FALSE 0 0 NA C coding 905 2715 25 2739 PB.4261.1 chr7 + 4246 21 novel_in_catalog SUN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2559 None 4 13 0 FALSE 0 0 NA C coding 866 2598 76 2673 PB.4261.6 chr7 + 4230 21 novel_in_catalog SUN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2544 None 2 18 0 FALSE 0 0 NA C coding 878 2634 25 2658 PB.4261.4 chr7 + 4407 22 novel_not_in_catalog SUN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2721 None 2 20 0 FALSE 0 0 NA C coding 937 2811 25 2835 PB.4261.5 chr7 + 4062 20 full-splice_match SUN1 ENST00000405266.5 4062 20 0 0 no_subtype FALSE canonical NA NA 2376 None 3 12 0 FALSE 0 0 NA C coding 822 2466 25 2490 PB.3454.1 chr5 - 617 3 full-splice_match HINT1 ENST00000304043.9 1081 3 193 271 no_subtype FALSE canonical NA NA 198 None 4 0 0 FALSE 0 0 NA A coding 126 378 88 465 PB.4261.8 chr7 + 2680 4 novel_not_in_catalog SUN1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 994 None 2 19 0 TRUE 0 0 NA C coding 101 303 806 1108 PB.4261.9 chr7 + 1501 1 incomplete-splice_match SUN1 ENST00000497943.1 2824 3 1321 3 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6633.1 chr11 + 3489 23 novel_in_catalog ATM novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2989 None 2 3 0 FALSE 0 0 NA B coding 1031 3093 78 3170 PB.8308.1 chr15 + 3004 1 genic_intron novelGene_842 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.118.2 chr1 - 3891 22 novel_in_catalog HSPG2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 99 None 2 4 0 FALSE 0 0 NA A coding 812 2436 384 2819 PB.6858.1 chr12 + 1694 8 full-splice_match CMAS ENST00000229329.6 1787 8 99 -6 no_subtype FALSE canonical NA NA 1145 None 55 3 0 FALSE 0 0 NA A coding 434 1302 32 1333 PB.774.4 chr1 - 5911 6 novel_not_in_catalog AIM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 134 None 4 38 1 TRUE 0 0 NA C coding 238 714 4989 5702 PB.1637.1 chr2 + 1375 2 incomplete-splice_match EPC2 ENST00000258484.10 3649 14 2266 8 internal_fragment FALSE canonical NA NA 119 None 2 2 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4494.10 chr7 - 1570 3 novel_in_catalog STEAP4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 112 None 11 1 0 FALSE 0 0 NA C coding 339 1017 115 1131 PB.8293.19 chr15 + 1313 1 incomplete-splice_match IQGAP1 ENST00000268182.9 7233 38 5920 1 no_subtype FALSE canonical NA NA NA None 10 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5142.5 chr8 + 5498 24 novel_not_in_catalog DENND3 novel NA NA NA NA no_subtype FALSE canonical NA NA 4780 None 3 16 2 TRUE 0 0 NA B coding 1099 3297 69 3365 PB.3922.1 chr6 - 1712 2 genic PRPH2 novel NA NA NA NA no_subtype TRUE canonical NA NA 25 None 7 7 0 TRUE 0 0 NA A coding 99 297 485 781 PB.8293.15 chr15 + 2855 12 incomplete-splice_match IQGAP1 ENST00000560738.1 3602 25 1759 -1012 internal_fragment FALSE canonical NA NA 1466 None 4 8 0 FALSE 0 0 NA C coding 520 1560 18 1577 PB.1953.2 chr2 - 3257 2 full-splice_match COPS9 ENST00000403160.4 609 2 502 -3150 no_subtype FALSE canonical NA NA 84 None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5116.1 chr8 + 1459 8 novel_not_in_catalog NSMCE2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 716 None 2 3 2 TRUE 0 0 NA B coding 179 537 99 635 PB.2236.1 chr3 + 3778 5 full-splice_match GLYCTK ENST00000436784.6 1982 5 -9 -1787 no_subtype TRUE canonical NA NA 774 None 8 12 1 FALSE 0 0 NA C coding 523 1569 70 1638 PB.6735.5 chr11 + 2488 1 genic_intron novelGene_1112 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1531.4 chr2 - 3809 1 genic_intron novelGene_957 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A coding 98 294 25 318 PB.10562.2 chr21 + 6145 1 antisense novelGene_SPATA20P1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.229 chr14 - 1550 11 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 88 None 2 12 5 TRUE 0 0 NA B coding 196 588 831 1418 PB.6735.2 chr11 + 2797 8 novel_in_catalog FLI1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 840 None 4 6 0 FALSE 0 0 NA C coding 432 1296 72 1367 PB.1940.4 chr2 + 3001 6 novel_not_in_catalog LRRFIP1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 64 None 3 22 5 TRUE 0 0 NA C coding 119 357 1083 1439 PB.4120.5 chr6 - 3276 1 genic_intron novelGene_1107 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3286.1 chr5 - 1707 2 genic_intron novelGene_591 novel NA NA NA NA no_subtype FALSE canonical NA NA 464 None 2 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7827.1 chr14 + 3613 11 novel_not_in_catalog FLVCR2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1845 None 2 12 1 TRUE 0 0 NA A coding 509 1527 388 1914 PB.4269.2 chr7 + 2016 1 novel_in_catalog CHST12 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 12 7 0 FALSE 0 0 NA B coding 414 1242 80 1321 PB.376.2 chr1 - 2979 5 novel_in_catalog C1orf123 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 29 None 3 13 0 FALSE 0 0 NA B coding 119 357 2065 2421 PB.1283.2 chr2 - 2799 3 full-splice_match CYP1B1 ENST00000610745.4 5250 3 25 2426 no_subtype FALSE canonical NA NA 377 None 12 6 0 FALSE 0 0 NA C coding 543 1629 379 2007 PB.592.7 chr1 - 3512 18 novel_in_catalog CSDE1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 59 None 3 7 0 FALSE 0 0 NA C coding 731 2193 447 2639 PB.592.5 chr1 - 3427 19 novel_not_in_catalog CSDE1 novel NA NA NA NA no_subtype FALSE canonical NA NA 59 None 4 12 1 FALSE 0 0 NA C coding 668 2004 549 2552 PB.6350.1 chr11 + 2590 7 novel_not_in_catalog MS4A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 772 None 390 11 2 FALSE 0 0 NA B coding 149 447 542 988 PB.4708.5 chr7 + 6071 4 genic_intron novelGene_1180 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4460 None 3 27 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.3178.1 chr5 + 1890 11 full-splice_match CCT5 ENST00000280326.8 3675 11 378 1407 no_subtype FALSE canonical NA NA 1540 None 109 2 0 FALSE 0 0 NA A coding 541 1623 43 1665 PB.10074.1 chr19 - 783 5 full-splice_match AP2S1 ENST00000263270.10 935 5 147 5 no_subtype FALSE canonical NA NA 82 None 6 1 0 FALSE 0 0 NA A coding 142 426 80 505 PB.1574.1 chr2 - 1700 13 novel_not_in_catalog BIN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 65 None 8 3 0 FALSE 0 0 NA B coding 385 1155 54 1208 PB.5562.1 chr9 + 1590 2 genic NTMT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 464 None 4 11 1 TRUE 0 0 NA A coding 120 360 473 832 PB.4120.6 chr6 - 1484 1 genic_intron novelGene_1108 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5631.1 chr9 - 2015 2 full-splice_match FUT7 ENST00000314412.6 2584 2 556 13 no_subtype FALSE canonical NA NA 476 None 15 5 0 FALSE 0 0 NA A coding 342 1026 464 1489 PB.10964.1 chrX - 1873 1 novel_in_catalog TFE3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA C coding 50 150 294 443 PB.8046.1 chr15 - 1745 11 full-splice_match ELL3 ENST00000319359.7 2352 11 575 32 no_subtype FALSE canonical NA NA 199 None 22 3 0 FALSE 0 0 NA C coding 397 1191 68 1258 PB.4894.5 chr8 - 2501 9 novel_not_in_catalog KAT6A novel NA NA NA NA no_subtype FALSE canonical NA NA 87 None 3 6 0 TRUE 0 0 NA C coding 520 1560 413 1972 PB.3809.1 chr6 - 960 4 full-splice_match LTB ENST00000429299.2 897 4 -72 9 no_subtype FALSE canonical NA NA 242 None 14 0 0 FALSE 0 0 NA A coding 244 732 81 812 PB.8046.2 chr15 - 1720 11 novel_not_in_catalog ELL3 novel NA NA NA NA no_subtype FALSE canonical NA NA 199 None 2 3 0 FALSE 0 0 NA C coding 389 1167 68 1234 PB.4894.1 chr8 - 6737 17 full-splice_match KAT6A ENST00000265713.6 9153 17 0 2416 no_subtype FALSE canonical NA NA 87 None 2 9 0 FALSE 0 0 NA C coding 2004 6012 413 6424 PB.4894.2 chr8 - 3411 12 novel_not_in_catalog KAT6A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 87 None 2 11 1 TRUE 0 0 NA C coding 582 1746 413 2158 PB.4894.3 chr8 - 3413 13 novel_not_in_catalog KAT6A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 89 None 3 10 0 TRUE 0 0 NA C coding 582 1746 415 2160 PB.7325.2 chr12 + 1597 11 full-splice_match P2RX4 ENST00000543984.5 1612 11 10 5 no_subtype FALSE canonical NA NA 1018 None 8 2 0 FALSE 0 0 NA C coding 287 861 182 1042 PB.3914.1 chr6 - 3680 1 novel_in_catalog MED20 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 12 24 0 FALSE 0 0 NA C coding 115 345 1867 2211 PB.3914.2 chr6 - 2456 4 full-splice_match MED20 ENST00000265350.8 2438 4 -20 2 no_subtype FALSE canonical NA NA 115 None 18 7 0 FALSE 0 0 NA C coding 212 636 102 737 PB.3914.3 chr6 - 2940 5 novel_not_in_catalog MED20 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 415 None 2 13 0 TRUE 0 0 NA C coding 204 612 593 1204 PB.3262.6 chr5 - 3283 17 full-splice_match IL6ST ENST00000381298.6 9057 17 42 5732 no_subtype FALSE canonical NA NA 168 None 46 0 0 FALSE 0 0 NA C coding 918 2754 272 3025 PB.3657.1 chr5 - 2782 9 novel_not_in_catalog KIAA1191 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 158 None 48 10 0 FALSE 0 0 NA A coding 286 858 388 1245 PB.10449.1 chr20 + 2935 2 genic_intron novelGene_525 novel NA NA NA NA no_subtype FALSE canonical NA NA 1941 None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2972.3 chr4 - 1997 2 novel_not_in_catalog LAMTOR3 novel NA NA NA NA no_subtype FALSE canonical NA NA 650 None 2 19 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.10312.1 chr20 - 2703 3 full-splice_match BCL2L1 ENST00000307677.4 2610 3 -107 14 no_subtype FALSE canonical NA NA 388 None 23 5 0 FALSE 0 0 NA C coding 233 699 519 1217 PB.2972.1 chr4 - 5415 3 genic LAMTOR3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 622 None 2 46 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.10886.3 chrX - 1999 12 full-splice_match RBBP7 ENST00000380084.8 2036 12 30 7 no_subtype FALSE canonical NA NA 363 None 3 2 0 FALSE 0 0 NA C coding 469 1407 216 1622 PB.10554.1 chr21 + 1524 1 full-splice_match MEMO1P1 ENST00000452572.1 888 1 -104 -532 no_subtype FALSE canonical NA NA NA None 14 3 0 FALSE 0 0 NA A coding 295 885 105 989 PB.10047.2 chr19 + 1972 6 full-splice_match NECTIN2 ENST00000252485.8 2112 6 125 15 no_subtype FALSE canonical NA NA 1268 None 7 4 0 FALSE 0 0 NA C coding 479 1437 227 1663 PB.5845.1 chr10 - 3644 29 novel_not_in_catalog CFAP70 novel NA NA NA NA no_subtype TRUE canonical NA NA 32 None 2 9 3 FALSE 0 0 NA A coding 1121 3363 72 3434 PB.7218.2 chr12 - 1611 2 full-splice_match MTERF2 ENST00000548101.1 715 2 -61 -835 no_subtype FALSE canonical NA NA 183 None 2 4 0 FALSE 0 0 NA C coding 385 1155 241 1395 PB.7218.1 chr12 - 3243 2 full-splice_match MTERF2 ENST00000552029.1 3235 2 -25 17 no_subtype FALSE canonical NA NA 2037 None 30 20 0 FALSE 0 0 NA C coding 383 1149 2095 3243 PB.10886.4 chrX - 1845 13 novel_not_in_catalog RBBP7 novel NA NA NA NA no_subtype FALSE canonical NA NA 27 None 3 2 0 TRUE 0 0 NA C coding 425 1275 194 1468 PB.2046.1 chr3 + 2786 2 genic_intron novelGene_192 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 584 None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7136.11 chr12 - 2070 14 novel_in_catalog PPP1R12A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 493 None 4 1 0 FALSE 0 0 NA C coding 602 1806 263 2068 PB.8753.1 chr16 - 2212 16 novel_not_in_catalog KARS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 85 None 2 5 0 TRUE 0 0 NA C coding 625 1875 120 1994 PB.10429.7 chr20 + 2642 2 antisense novelGene_SULF2_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 22 None 4 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10429.4 chr20 + 2616 2 genic_intron novelGene_471 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 21 None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10429.3 chr20 + 5343 23 full-splice_match NCOA3 ENST00000372004.7 7939 23 34 2562 no_subtype FALSE canonical NA NA 4433 None 12 13 0 FALSE 0 0 NA C coding 1420 4260 183 4442 PB.10429.1 chr20 + 1730 3 novel_in_catalog NCOA3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 179 None 9 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1400.1 chr2 + 1425 1 full-splice_match PCBP1 ENST00000303577.6 1750 1 270 55 no_subtype FALSE canonical NA NA NA None 31 0 0 FALSE 0 0 NA A coding 356 1068 21 1088 PB.1903.1 chr2 - 2552 3 full-splice_match PID1 ENST00000392055.7 2533 3 0 -19 no_subtype FALSE canonical NA NA 272 None 2 11 0 FALSE 0 0 NA A coding 217 651 243 893 PB.7807.1 chr14 + 1536 12 full-splice_match COQ6 ENST00000334571.6 2118 12 17 565 no_subtype FALSE canonical NA NA 1400 None 28 3 0 FALSE 0 0 NA A coding 468 1404 24 1427 PB.10294.1 chr20 + 6184 1 antisense novelGene_RNA5SP477_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 43 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10429.8 chr20 + 2626 1 incomplete-splice_match NCOA3 ENST00000372004.7 7939 23 5302 12 no_subtype FALSE canonical NA NA NA None 22 25 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10885.1 chrX + 2608 9 full-splice_match SYAP1 ENST00000380155.3 6129 9 9 3512 no_subtype FALSE canonical NA NA 1015 None 2 7 0 FALSE 0 0 NA A coding 352 1056 85 1140 PB.10141.1 chr19 + 1913 3 novel_not_in_catalog FPR2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1810 None 5 7 2 TRUE 0 0 NA A coding 351 1053 68 1120 PB.4300.1 chr7 + 1781 9 novel_not_in_catalog TMEM106B novel NA NA NA NA no_subtype TRUE canonical NA NA 847 None 4 3 0 TRUE 0 0 NA A coding 274 822 162 983 PB.4300.2 chr7 - 3051 2 antisense novelGene_TMEM106B_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2816 None 5 28 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.655.1 chr1 + 1845 10 full-splice_match ECM1 ENST00000369047.8 2070 10 -5 230 no_subtype FALSE canonical NA NA 1522 None 15 0 0 FALSE 0 0 NA A coding 540 1620 131 1750 PB.2469.6 chr3 + 3622 5 novel_not_in_catalog ATP2C1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2583 None 2 25 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.5758.1 chr10 + 2440 11 novel_not_in_catalog RASSF4 novel NA NA NA NA no_subtype FALSE canonical NA NA 998 None 10 10 0 FALSE 0 0 NA B coding 321 963 94 1056 PB.5758.2 chr10 + 2957 11 novel_not_in_catalog RASSF4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1514 None 2 9 0 FALSE 0 0 NA B coding 302 906 113 1018 PB.2469.5 chr3 + 3384 28 novel_in_catalog ATP2C1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2855 None 5 3 0 FALSE 0 0 NA C coding 933 2799 150 2948 PB.3296.1 chr5 + 6296 25 full-splice_match ERBIN ENST00000380943.6 6410 25 106 8 no_subtype FALSE canonical NA NA 4210 None 6 13 0 FALSE 0 0 NA A coding 1371 4113 203 4315 PB.2469.3 chr3 + 3693 29 novel_in_catalog ATP2C1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3168 None 2 5 0 FALSE 0 0 NA C coding 939 2817 445 3261 PB.787.4 chr1 - 4135 33 full-splice_match COPA ENST00000241704.7 4789 33 135 519 no_subtype FALSE canonical NA NA 135 None 104 4 0 FALSE 0 0 NA C coding 1224 3672 96 3767 PB.7497.1 chr13 + 1938 2 full-splice_match TRIM13 ENST00000378182.3 7249 2 27 5284 no_subtype FALSE canonical NA NA 705 None 2 8 0 FALSE 0 0 NA C coding 407 1221 712 1932 PB.8491.5 chr16 + 2640 2 novel_not_in_catalog EEF2K novel NA NA NA NA no_subtype FALSE canonical NA NA 313 None 2 21 1 TRUE 0 0 NA B coding 137 411 270 680 PB.7782.2 chr14 - 2690 9 novel_not_in_catalog DCAF5 novel NA NA NA NA no_subtype FALSE canonical NA NA 60 None 8 1 1 FALSE 0 0 NA B coding 616 1848 829 2676 PB.5269.3 chr9 - 2600 3 novel_not_in_catalog SIGMAR1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 232 None 2 5 0 TRUE 0 0 NA C coding 120 360 81 440 PB.8491.6 chr16 + 2077 1 incomplete-splice_match EEF2K ENST00000263026.9 7388 18 3207 2105 no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8491.1 chr16 + 2659 19 novel_not_in_catalog EEF2K novel NA NA NA NA no_subtype FALSE canonical NA NA 2497 None 28 6 0 TRUE 0 0 NA B coding 725 2175 430 2604 PB.2892.2 chr4 + 3249 9 full-splice_match SEPT11 ENST00000502584.5 2615 9 5 -639 no_subtype FALSE canonical NA NA 1234 None 5 17 0 FALSE 0 0 NA C coding 425 1275 149 1423 PB.5578.2 chr9 - 1721 2 full-splice_match FAM78A ENST00000372271.3 3966 2 38 2207 no_subtype FALSE canonical NA NA 653 None 7 4 0 FALSE 0 0 NA C coding 283 849 331 1179 PB.8491.2 chr16 + 3253 13 novel_in_catalog EEF2K novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1851 None 2 9 0 FALSE 0 0 NA B coding 518 1554 475 2028 PB.7969.1 chr15 - 1649 1 full-splice_match NSMCE3 ENST00000332303.5 4838 1 20 3169 no_subtype FALSE canonical NA NA NA None 12 12 0 FALSE 0 0 NA A coding 304 912 105 1016 PB.7210.5 chr12 + 3205 28 novel_in_catalog KIAA1033 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 3174 None 2 4 2 FALSE 0 0 NA C coding 513 1539 1427 2965 PB.7210.4 chr12 + 3456 32 incomplete-splice_match KIAA1033 ENST00000332180.9 5812 33 63 2293 3prime_fragment FALSE canonical NA NA 3378 None 11 2 0 FALSE 0 0 NA C coding 1144 3432 25 3456 PB.7210.3 chr12 + 3105 29 novel_not_in_catalog KIAA1033 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3073 None 2 5 1 TRUE 0 0 NA C coding 922 2766 73 2838 PB.7210.2 chr12 + 5739 33 full-splice_match KIAA1033 ENST00000332180.9 5812 33 63 10 no_subtype FALSE canonical NA NA 3478 None 14 19 0 FALSE 0 0 NA C coding 1173 3519 25 3543 PB.7210.1 chr12 + 3123 30 incomplete-splice_match KIAA1033 ENST00000332180.9 5812 33 57 2632 3prime_fragment FALSE canonical NA NA 3090 None 29 0 0 FALSE 0 0 NA C coding 1031 3093 31 3123 PB.7401.2 chr13 + 3001 12 full-splice_match CDK8 ENST00000536792.5 3032 12 26 5 no_subtype FALSE canonical NA NA 1723 None 2 4 0 FALSE 0 0 NA C coding 206 618 1229 1846 PB.7401.1 chr13 + 3051 13 full-splice_match CDK8 ENST00000381527.7 3055 13 -9 13 no_subtype FALSE canonical NA NA 1781 None 7 2 0 FALSE 0 0 NA C coding 464 1392 513 1904 PB.7350.1 chr12 - 2725 1 incomplete-splice_match PITPNM2 ENST00000542749.5 6660 24 3935 1 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A coding 107 321 406 726 PB.8330.1 chr15 - 5586 3 genic RP11-505E24.3 novel NA NA NA NA no_subtype TRUE canonical NA NA 2377 None 7 23 0 TRUE 0 0 NA A coding 172 516 2546 3061 PB.1714.1 chr2 + 1636 3 fusion HOXD10,HOXD11 novel NA NA NA NA no_subtype FALSE canonical NA NA 658 None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1714.2 chr2 + 3050 2 full-splice_match HOXD11 ENST00000498438.1 1259 2 293 -2084 no_subtype FALSE canonical NA NA 118 None 5 18 0 FALSE 0 0 NA A coding 37 111 241 351 PB.1714.3 chr2 + 1560 2 full-splice_match HOXD10 ENST00000490088.2 1010 2 -13 -537 no_subtype FALSE canonical NA NA 582 None 2 5 0 FALSE 0 0 NA A coding 37 111 253 363 PB.9610.1 chr18 - 1439 3 novel_not_in_catalog RP11-162A12.2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1236 None 2 9 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.724.2 chr1 + 1345 10 novel_in_catalog FDPS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1099 None 2 1 0 FALSE 0 0 NA B coding 419 1257 41 1297 PB.5275.2 chr9 - 2518 13 novel_in_catalog FANCG novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 590 None 2 3 0 FALSE 0 0 NA C coding 551 1653 507 2159 PB.5275.3 chr9 - 2638 14 full-splice_match FANCG ENST00000378643.7 2631 14 -16 9 no_subtype FALSE canonical NA NA 592 None 8 3 0 FALSE 0 0 NA C coding 622 1866 509 2374 PB.5275.1 chr9 - 3113 10 novel_not_in_catalog FANCG novel NA NA NA NA no_subtype FALSE canonical NA NA 572 None 2 15 1 TRUE 0 0 NA C coding 230 690 489 1178 PB.4249.1 chr6 - 5462 23 novel_not_in_catalog RPS6KA2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 110 None 3 16 0 TRUE 0 0 NA B coding 731 2193 69 2261 PB.4249.2 chr6 - 3791 22 novel_not_in_catalog RPS6KA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 111 None 3 8 0 FALSE 0 0 NA B coding 727 2181 82 2262 PB.835.1 chr1 - 2083 8 full-splice_match TADA1 ENST00000367874.4 2159 8 68 8 no_subtype FALSE canonical NA NA 100 None 2 5 0 FALSE 0 0 NA A coding 335 1005 27 1031 PB.10974.1 chrX - 1744 1 full-splice_match VDAC1P2 ENST00000423609.1 850 1 -33 -861 no_subtype FALSE canonical NA NA NA None 10 3 0 FALSE 0 0 NA A coding 129 387 494 880 PB.1787.1 chr2 - 2967 2 antisense novelGene_SEPHS1P6_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1667 None 15 22 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8320.2 chr15 + 4134 1 incomplete-splice_match SYNM ENST00000336292.10 7394 4 3247 14 no_subtype FALSE canonical NA NA NA None 5 22 0 FALSE 0 0 NA B coding 426 1278 336 1613 PB.893.2 chr1 - 3353 4 novel_not_in_catalog TOR1AIP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 111 None 17 14 0 TRUE 0 0 NA B coding 131 393 925 1317 PB.8320.1 chr15 + 3066 2 incomplete-splice_match SYNM ENST00000560674.5 5908 5 2172 670 internal_fragment FALSE canonical NA NA 892 None 2 13 0 FALSE 0 0 NA B coding 317 951 248 1198 PB.3709.1 chr6 - 790 5 novel_not_in_catalog GMDS novel NA NA NA NA no_subtype FALSE canonical NA NA 81 None 2 5 0 FALSE 0 0 NA B coding 114 342 85 426 PB.3709.2 chr6 - 1505 14 novel_not_in_catalog GMDS novel NA NA NA NA no_subtype TRUE canonical NA NA 130 None 13 6 0 TRUE 0 0 NA B coding 372 1116 29 1144 PB.2539.3 chr3 - 2977 2 antisense novelGene_MBNL1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 20 None 61 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9511.3 chr18 + 2156 20 full-splice_match C18orf8 ENST00000269221.7 2162 20 7 -1 no_subtype FALSE non_canonical NA NA 1997 None 7 1 0 FALSE 0 0 NA A coding 657 1971 104 2074 PB.436.1 chr1 - 1894 9 novel_not_in_catalog CRYZ novel NA NA NA NA no_subtype FALSE canonical NA NA 98 None 11 7 0 FALSE 0 0 NA A coding 329 987 105 1091 PB.9511.1 chr18 + 3375 14 novel_not_in_catalog RIOK3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2656 None 122 8 1 TRUE 0 0 NA A coding 519 1557 141 1697 PB.1792.1 chr2 + 2878 12 full-splice_match BZW1 ENST00000409600.5 6875 12 390 3607 no_subtype FALSE canonical NA NA 1293 None 580 5 0 FALSE 0 0 NA A coding 419 1257 66 1322 PB.2654.16 chr3 + 1942 1 incomplete-splice_match EIF4A2 ENST00000485101.5 5327 4 3383 3 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5570.1 chr9 + 1569 16 novel_not_in_catalog ASS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1292 None 25 2 0 FALSE 0 0 NA C coding 412 1236 100 1335 PB.5570.2 chr9 + 1492 15 full-splice_match ASS1 ENST00000352480.9 1564 15 32 40 no_subtype FALSE canonical NA NA 1233 None 2 2 0 FALSE 0 0 NA C coding 412 1236 41 1276 PB.9606.1 chr18 - 3356 2 full-splice_match ZADH2 ENST00000322342.3 7732 2 169 4207 no_subtype FALSE canonical NA NA 330 None 53 11 0 FALSE 0 0 NA C coding 377 1131 122 1252 PB.9606.2 chr18 - 3128 2 full-splice_match ZADH2 ENST00000582437.1 671 2 -51 -2406 no_subtype FALSE canonical NA NA 98 None 3 10 0 FALSE 0 0 NA C coding 254 762 259 1020 PB.9970.3 chr19 - 3121 17 novel_not_in_catalog RASGRP4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 146 None 14 11 1 FALSE 0 0 NA A coding 538 1614 527 2140 PB.8598.1 chr16 - 5724 4 genic_intron novelGene_480 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 124 None 2 47 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6294.1 chr11 + 2769 4 novel_not_in_catalog SLC35C1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1151 None 20 5 1 TRUE 0 0 NA B coding 351 1053 58 1110 PB.6294.2 chr11 + 3383 3 novel_not_in_catalog SLC35C1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1765 None 5 11 1 TRUE 0 0 NA B coding 364 1092 633 1724 PB.1386.2 chr2 - 3596 2 genic_intron novelGene_616 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3429 None 6 19 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1343.8 chr2 - 3865 18 novel_not_in_catalog PPP4R3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 35 None 2 4 0 TRUE 0 0 NA B coding 849 2547 142 2688 PB.1343.9 chr2 - 3777 17 novel_not_in_catalog PPP4R3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 53 None 6 4 0 TRUE 0 0 NA B coding 817 2451 155 2605 PB.1794.7 chr2 - 3184 12 novel_not_in_catalog CLK1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 22 None 4 9 0 TRUE 0 0 NA C coding 333 999 1970 2968 PB.5345.10 chr9 - 2603 16 novel_in_catalog HNRNPK novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 121 None 4 8 0 FALSE 0 0 NA C coding 439 1317 229 1545 PB.5783.1 chr10 + 3776 2 genic_intron novelGene_511 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1165 None 2 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4411.17 chr7 - 5665 11 novel_not_in_catalog MYO1G novel NA NA NA NA no_subtype FALSE canonical NA NA 25 None 2 23 1 TRUE 0 0 NA C coding 416 1248 3696 4943 PB.4411.16 chr7 - 5763 10 full-splice_match MYO1G ENST00000480503.5 5672 10 -93 2 no_subtype FALSE canonical NA NA 227 None 7 24 0 FALSE 0 0 NA C coding 416 1248 3795 5042 PB.4411.19 chr7 + 1815 10 full-splice_match CCM2 ENST00000258781.10 1894 10 75 4 no_subtype FALSE canonical NA NA 1128 None 2 3 0 FALSE 0 0 NA C coding 444 1332 75 1406 PB.4411.18 chr7 - 2724 12 novel_not_in_catalog MYO1G novel NA NA NA NA no_subtype FALSE canonical NA NA 34 None 5 11 1 TRUE 0 0 NA C coding 654 1962 43 2004 PB.1343.2 chr2 - 4215 18 novel_not_in_catalog PPP4R3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 34 None 2 8 0 TRUE 0 0 NA B coding 849 2547 135 2681 PB.1343.4 chr2 - 4127 17 novel_not_in_catalog PPP4R3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 37 None 2 18 1 TRUE 0 0 NA B coding 817 2451 143 2593 PB.4581.1 chr7 - 1907 14 full-splice_match ORC5 ENST00000297431.8 1958 14 40 11 no_subtype FALSE canonical NA NA 175 None 8 3 0 FALSE 0 0 NA C coding 435 1305 104 1408 PB.1615.6 chr2 + 1621 1 genic_intron novelGene_1207 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9114.1 chr17 + 3125 2 antisense novelGene_RP5-1028K7.3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 929 None 4 14 1 FALSE 0 0 NA A coding 174 522 291 812 PB.5546.1 chr9 - 1629 9 full-splice_match WDR34 ENST00000372715.6 1755 9 102 24 no_subtype FALSE canonical NA NA 145 None 5 2 0 FALSE 0 0 NA A coding 419 1257 311 1567 PB.1921.1 chr2 + 3446 26 novel_not_in_catalog GIGYF2 novel NA NA NA NA no_subtype TRUE canonical NA NA 3274 None 2 3 0 TRUE 0 0 NA B coding 1090 3270 176 3445 PB.3715.2 chr6 + 1501 7 full-splice_match BPHL ENST00000380379.9 1928 7 36 391 no_subtype FALSE canonical NA NA 801 None 12 5 0 FALSE 0 0 NA C coding 291 873 14 886 PB.3715.1 chr6 + 1372 6 novel_in_catalog BPHL novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 671 None 2 6 0 FALSE 0 0 NA C coding 247 741 16 756 PB.7630.4 chr14 + 1809 13 novel_not_in_catalog IRF9 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1751 None 10 4 1 TRUE 0 0 NA C coding 393 1179 43 1221 PB.7260.1 chr12 - 5618 2 novel_not_in_catalog ATXN2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1146 None 2 39 0 TRUE 0 0 NA A coding 140 420 1465 1884 PB.7630.7 chr14 + 2720 12 novel_not_in_catalog IRF9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2636 None 2 10 1 TRUE 0 0 NA C coding 422 1266 37 1302 PB.10726.1 chr22 + 1558 5 full-splice_match HMOX1 ENST00000216117.8 1822 5 257 7 no_subtype FALSE canonical NA NA 818 None 59 3 0 FALSE 0 0 NA A coding 288 864 83 946 PB.5525.1 chr9 + 2917 1 antisense novelGene_SH2D3C_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A coding 143 429 194 622 PB.370.1 chr1 - 3091 18 novel_not_in_catalog ORC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 161 None 12 7 0 FALSE 0 0 NA A coding 859 2577 167 2743 PB.2880.7 chr4 - 1969 4 novel_in_catalog G3BP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 207 None 3 10 0 FALSE 0 0 NA C coding 156 468 232 699 PB.2880.6 chr4 - 4158 11 novel_in_catalog G3BP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 146 None 3 5 0 FALSE 0 0 NA C coding 449 1347 171 1517 PB.2880.1 chr4 - 2758 1 incomplete-splice_match G3BP2 ENST00000395719.7 4217 12 1454 6 no_subtype FALSE canonical NA NA NA None 6 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2880.3 chr4 - 2521 11 full-splice_match G3BP2 ENST00000357854.7 2609 11 -12 100 no_subtype FALSE canonical NA NA 206 None 96 2 0 FALSE 0 0 NA C coding 449 1347 231 1577 PB.2880.2 chr4 - 2723 12 full-splice_match G3BP2 ENST00000359707.8 4883 12 556 1604 no_subtype FALSE canonical NA NA 206 None 9 3 0 FALSE 0 0 NA C coding 482 1446 231 1676 PB.63.1 chr1 + 3666 10 full-splice_match TNFRSF1B ENST00000376259.6 3683 10 11 6 no_subtype FALSE canonical NA NA 1183 None 69 23 0 FALSE 0 0 NA C coding 461 1383 79 1461 PB.63.2 chr1 + 1843 7 incomplete-splice_match TNFRSF1B ENST00000492361.1 3583 9 411 1329 internal_fragment FALSE canonical NA NA 683 None 3 7 0 FALSE 0 0 NA C coding 266 798 164 961 PB.63.4 chr1 + 1162 2 incomplete-splice_match TNFRSF1B ENST00000492361.1 3583 9 937 1484 internal_fragment FALSE canonical NA NA 157 None 5 20 0 FALSE 0 0 NA C coding 57 171 265 435 PB.9978.1 chr19 - 1872 16 full-splice_match SARS2 ENST00000221431.10 2057 16 134 51 no_subtype FALSE canonical NA NA 293 None 9 1 0 FALSE 0 0 NA A coding 518 1554 27 1580 PB.7272.3 chr12 + 3388 1 novel_in_catalog OAS1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7272.2 chr12 + 1547 2 full-splice_match OAS1 ENST00000553185.1 664 2 -65 -818 no_subtype FALSE canonical NA NA 247 None 2 3 0 FALSE 0 0 NA C coding 177 531 68 598 PB.7272.1 chr12 + 1611 6 full-splice_match OAS1 ENST00000202917.9 1816 6 203 2 no_subtype FALSE canonical NA NA 1098 None 135 1 0 FALSE 0 0 NA C coding 400 1200 61 1260 PB.2890.9 chr4 - 2602 6 novel_not_in_catalog SCARB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 436 None 2 16 0 TRUE 0 0 NA C coding 175 525 320 844 PB.2890.6 chr4 - 3352 12 full-splice_match SCARB2 ENST00000264896.6 4763 12 108 1303 no_subtype FALSE canonical NA NA 359 None 3 15 1 FALSE 0 0 NA C coding 478 1434 243 1676 PB.2890.7 chr4 - 1959 13 novel_not_in_catalog SCARB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 390 None 3 5 1 TRUE 0 0 NA C coding 320 960 743 1702 PB.2890.4 chr4 - 2996 13 novel_not_in_catalog SCARB2 novel NA NA NA NA no_subtype TRUE canonical NA NA 160 None 4 7 0 TRUE 0 0 NA C coding 320 960 360 1319 PB.2890.5 chr4 - 1973 14 novel_not_in_catalog SCARB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 399 None 46 4 0 TRUE 0 0 NA C coding 478 1434 283 1716 PB.2890.2 chr4 - 1831 2 novel_not_in_catalog SCARB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 275 None 2 15 1 TRUE 0 0 NA C coding 108 324 841 1164 PB.2890.1 chr4 + 1801 2 antisense novelGene_SCARB2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1564 None 2 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5140.1 chr8 + 1874 3 full-splice_match CHRAC1 ENST00000220913.9 2488 3 168 446 no_subtype FALSE canonical NA NA 308 None 5 13 0 FALSE 0 0 NA A coding 131 393 35 427 PB.696.3 chr1 - 2663 14 novel_not_in_catalog CRTC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 290 None 4 6 1 TRUE 0 0 NA C coding 425 1275 949 2223 PB.4997.1 chr8 - 3107 3 novel_not_in_catalog C8orf59 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1115 None 3 21 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.4424.3 chr7 + 3031 12 novel_in_catalog CCT6A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1383 None 2 22 0 FALSE 0 0 NA C coding 490 1470 37 1506 PB.10455.1 chr20 + 1690 6 full-splice_match CSTF1 ENST00000217109.8 4290 6 272 2328 no_subtype FALSE canonical NA NA 1116 None 7 4 0 FALSE 0 0 NA A coding 431 1293 81 1373 PB.10843.1 chr22 - 2572 14 full-splice_match LMF2 ENST00000474879.6 2582 14 1 9 no_subtype FALSE canonical NA NA 109 None 38 13 0 FALSE 0 0 NA C coding 707 2121 16 2136 PB.673.2 chr1 + 3589 1 genic TNFAIP8L2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 8 0 FALSE 0 0 NA C coding 228 684 1918 2601 PB.673.1 chr1 + 1643 2 full-splice_match TNFAIP8L2 ENST00000368910.3 1178 2 20 -485 no_subtype FALSE canonical NA NA 74 None 6 1 0 FALSE 0 0 NA C coding 184 552 107 658 PB.10852.4 chrX + 1842 10 novel_not_in_catalog CD99 novel NA NA NA NA no_subtype FALSE canonical NA NA 1544 None 2 13 1 TRUE 0 0 NA C coding 160 480 75 554 PB.3775.1 chr6 + 4326 7 novel_in_catalog E2F3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 786 None 4 16 0 FALSE 0 0 NA A coding 340 1020 27 1046 PB.5879.1 chr10 + 2482 8 novel_in_catalog TSPAN14 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 763 None 108 12 0 FALSE 0 0 NA B coding 270 810 23 832 PB.3775.3 chr6 + 6052 5 genic E2F3-IT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5513 None 2 38 3 TRUE 0 0 NA A non_coding NA NA NA NA PB.5879.3 chr10 + 2639 8 novel_not_in_catalog TSPAN14 novel NA NA NA NA no_subtype FALSE canonical NA NA 918 None 2 14 0 FALSE 0 0 NA B coding 215 645 343 987 PB.10435.1 chr20 - 3354 1 incomplete-splice_match B4GALT5 ENST00000371711.4 4722 9 1362 7 no_subtype FALSE canonical NA NA NA None 5 21 0 FALSE 0 0 NA A coding 128 384 792 1175 PB.5879.5 chr10 + 1442 1 incomplete-splice_match TSPAN14 ENST00000616406.1 2436 7 991 4 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5345.13 chr9 - 2007 17 full-splice_match HNRNPK ENST00000360384.9 2038 17 29 2 no_subtype FALSE canonical NA NA 69 None 6 4 0 FALSE 0 0 NA C coding 463 1389 177 1565 PB.2177.4 chr3 - 1694 2 full-splice_match IP6K2 ENST00000417896.1 1124 2 -2 -568 no_subtype FALSE canonical NA NA 52 None 2 7 0 FALSE 0 0 NA C coding 130 390 180 569 PB.2177.5 chr3 - 1481 1 novel_in_catalog IP6K2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7417.2 chr13 + 3003 9 novel_not_in_catalog USPL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1608 None 2 4 0 TRUE 0 0 NA C coding 349 1047 582 1628 PB.7417.3 chr13 + 3646 9 full-splice_match USPL1 ENST00000255304.8 3814 9 168 0 no_subtype FALSE canonical NA NA 1570 None 2 4 0 FALSE 0 0 NA C coding 1091 3273 178 3450 PB.9158.1 chr17 + 2912 8 novel_not_in_catalog CD300LG novel NA NA NA NA no_subtype FALSE canonical NA NA 1079 None 2 14 0 FALSE 0 0 NA B coding 372 1116 75 1190 PB.7417.1 chr13 + 3500 8 novel_in_catalog USPL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1426 None 12 3 0 FALSE 0 0 NA C coding 911 2733 574 3306 PB.5485.1 chr9 + 2711 10 novel_in_catalog PTGS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1599 None 7 1 0 FALSE 0 0 NA C coding 490 1470 483 1952 PB.1396.2 chr2 + 2860 2 genic_intron novelGene_658 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2755 None 2 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8407.1 chr16 - 2104 7 full-splice_match TFAP4 ENST00000204517.10 2215 7 108 3 no_subtype FALSE canonical NA NA 310 None 5 7 0 FALSE 0 0 NA A coding 338 1014 222 1235 PB.4999.1 chr8 + 1549 7 full-splice_match CA2 ENST00000285379.9 1717 7 157 11 no_subtype FALSE canonical NA NA 736 None 293 2 0 FALSE 0 0 NA C coding 260 780 74 853 PB.10852.5 chrX + 2709 10 novel_not_in_catalog CD99 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 484 None 2 37 3 TRUE 0 0 NA C coding 179 537 18 554 PB.2735.1 chr4 + 3246 2 genic_intron novelGene_48 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 35 None 2 37 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4999.2 chr8 + 1551 7 novel_not_in_catalog CA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 719 None 2 2 1 FALSE 0 0 NA C coding 21 63 774 836 PB.9923.1 chr19 + 3394 10 full-splice_match LSM14A ENST00000544216.7 3596 10 -41 243 no_subtype FALSE canonical NA NA 1486 None 63 7 0 FALSE 0 0 NA C coding 463 1389 119 1507 PB.9923.2 chr19 + 3466 11 full-splice_match LSM14A ENST00000433627.9 3424 11 -52 10 no_subtype FALSE canonical NA NA 1552 None 14 9 0 FALSE 0 0 NA C coding 463 1389 128 1516 PB.9923.3 chr19 + 3253 9 novel_in_catalog LSM14A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1339 None 2 10 1 FALSE 0 0 NA C coding 404 1212 149 1360 PB.8076.1 chr15 + 3403 2 novel_not_in_catalog FGF7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2756 None 4 15 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.2070.1 chr3 - 2960 1 genic_intron novelGene_294 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6564.1 chr11 - 2840 2 genic_intron novelGene_748 novel NA NA NA NA no_subtype FALSE canonical NA NA 442 None 4 9 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7244.1 chr12 + 3999 20 novel_not_in_catalog ATP2A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2885 None 2 16 1 FALSE 0 0 NA B coding 507 1521 1632 3152 PB.6558.1 chr11 - 1557 5 novel_not_in_catalog NDUFC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 299 None 3 8 2 TRUE 0 0 NA A coding 119 357 134 490 PB.7860.1 chr14 + 2634 16 novel_not_in_catalog C14orf159 novel NA NA NA NA no_subtype FALSE canonical NA NA 1971 None 4 4 0 TRUE 0 0 NA B coding 590 1770 345 2114 PB.10802.10 chr22 - 1203 7 full-splice_match RRP7A ENST00000323013.6 3801 7 6 2592 no_subtype FALSE canonical NA NA 83 None 2 5 0 FALSE 0 0 NA C coding 280 840 11 850 PB.7860.3 chr14 + 2712 16 novel_not_in_catalog C14orf159 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2056 None 2 4 1 TRUE 0 0 NA B coding 545 1635 344 1978 PB.3558.7 chr5 - 5911 1 novel_in_catalog NR3C1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 34 0 FALSE 0 0 NA C coding 395 1185 2253 3437 PB.8301.1 chr15 + 3247 21 novel_not_in_catalog UNC45A novel NA NA NA NA no_subtype FALSE canonical NA NA 2614 None 43 2 0 TRUE 0 0 NA B coding 944 2832 38 2869 PB.4386.1 chr7 - 3573 3 antisense novelGene_RALA_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1210 None 2 20 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.665.3 chr1 - 4310 22 novel_not_in_catalog ARNT novel NA NA NA NA no_subtype FALSE canonical NA NA 91 None 4 11 1 TRUE 0 0 NA C coding 436 1308 1085 2392 PB.8417.2 chr16 - 1366 3 full-splice_match UBALD1 ENST00000283474.11 1413 3 38 9 no_subtype FALSE canonical NA NA 211 None 9 4 0 FALSE 0 0 NA A coding 177 531 92 622 PB.1529.1 chr2 + 4127 4 full-splice_match C2orf49 ENST00000258457.6 4768 4 195 446 no_subtype FALSE canonical NA NA 676 None 4 22 0 FALSE 0 0 NA A coding 232 696 35 730 PB.7246.1 chr12 + 3539 2 novel_not_in_catalog ATP2A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1163 None 2 23 1 TRUE 0 0 NA B coding 112 336 1762 2097 PB.6223.1 chr11 + 1833 1 genic_intron novelGene_154 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5684.1 chr10 - 1579 9 full-splice_match PHYH ENST00000263038.8 1577 9 -6 4 no_subtype FALSE canonical NA NA 140 None 11 8 0 FALSE 0 0 NA A coding 353 1059 21 1079 PB.2461.4 chr3 - 1321 3 full-splice_match RAB43 ENST00000315150.9 4467 3 223 2923 no_subtype FALSE canonical NA NA 282 None 3 2 0 FALSE 0 0 NA C coding 212 636 79 714 PB.7651.2 chr14 + 2979 13 novel_not_in_catalog NUBPL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1686 None 3 10 1 TRUE 0 0 NA B coding 319 957 4 960 PB.7651.1 chr14 + 3005 13 novel_not_in_catalog NUBPL novel NA NA NA NA no_subtype TRUE canonical NA NA 1706 None 7 9 1 TRUE 0 0 NA B coding 319 957 28 984 PB.3612.1 chr5 - 2642 3 novel_not_in_catalog MED7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 63 None 7 15 1 TRUE 0 0 NA A coding 233 699 81 779 PB.734.1 chr1 - 2851 14 novel_in_catalog KIAA0907 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 70 None 2 4 0 FALSE 0 0 NA C coding 384 1152 33 1184 PB.734.2 chr1 - 2950 14 full-splice_match KIAA0907 ENST00000368321.7 2947 14 -9 6 no_subtype FALSE canonical NA NA 71 None 48 3 0 FALSE 0 0 NA C coding 614 1842 34 1875 PB.734.3 chr1 - 2922 14 novel_in_catalog KIAA0907 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 71 None 6 23 1 FALSE 0 0 NA C coding 510 1530 34 1563 PB.7754.2 chr14 + 2932 27 novel_in_catalog MTHFD1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2697 None 2 4 0 FALSE 0 0 NA C coding 877 2631 60 2690 PB.5497.1 chr9 + 6444 4 genic NEK6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4990 None 3 56 3 TRUE 0 0 NA C coding 183 549 2038 2586 PB.1907.16 chr2 + 5305 28 novel_not_in_catalog SP100 novel NA NA NA NA no_subtype FALSE canonical NA NA 2541 None 2 22 0 FALSE 0 0 NA B coding 858 2574 76 2649 PB.7754.1 chr14 + 3107 28 full-splice_match MTHFD1 ENST00000216605.12 3136 28 19 10 no_subtype TRUE canonical NA NA 2871 None 80 3 0 FALSE 0 0 NA C coding 935 2805 60 2864 PB.1907.10 chr2 + 1637 14 novel_not_in_catalog SP100 novel NA NA NA NA no_subtype FALSE canonical NA NA 1282 None 90 3 0 FALSE 0 0 NA B coding 453 1359 19 1377 PB.1907.11 chr2 + 1540 16 novel_not_in_catalog SP100 novel NA NA NA NA no_subtype FALSE canonical NA NA 1496 None 65 1 0 FALSE 0 0 NA B coding 483 1449 92 1540 PB.1689.1 chr2 - 1522 1 incomplete-splice_match TLK1 ENST00000359766.7 4321 23 2785 15 no_subtype FALSE canonical NA NA NA None 4 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10060.3 chr19 + 2662 12 novel_not_in_catalog VASP novel NA NA NA NA no_subtype TRUE canonical NA NA 1817 None 2 11 0 FALSE 0 0 NA C coding 318 954 289 1242 PB.10060.2 chr19 + 1664 10 novel_in_catalog VASP novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 818 None 2 6 0 FALSE 0 0 NA C coding 165 495 359 853 PB.10060.1 chr19 + 2217 13 full-splice_match VASP ENST00000245932.10 2305 13 82 6 no_subtype FALSE canonical NA NA 1379 None 36 20 1 FALSE 0 0 NA C coding 380 1140 275 1414 PB.2502.2 chr3 + 3024 24 novel_in_catalog RASA2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2532 None 37 1 0 FALSE 0 0 NA B coding 850 2550 11 2560 PB.4140.2 chr6 - 2430 12 full-splice_match SGK1 ENST00000528577.5 1850 12 44 -624 no_subtype FALSE canonical NA NA 199 None 3 4 0 FALSE 0 0 NA C coding 459 1377 40 1416 PB.10060.4 chr19 + 2068 14 novel_not_in_catalog VASP novel NA NA NA NA no_subtype FALSE canonical NA NA 1223 None 2 7 1 FALSE 0 0 NA C coding 328 984 275 1258 PB.6431.1 chr11 + 1608 2 full-splice_match CDC42EP2 ENST00000279249.2 2023 2 76 339 no_subtype FALSE canonical NA NA 61 None 16 6 0 FALSE 0 0 NA A coding 210 630 417 1046 PB.8784.1 chr16 + 4351 14 incomplete-splice_match CRISPLD2 ENST00000262424.9 4586 15 234 1 internal_fragment FALSE canonical NA NA 1429 None 2 21 0 FALSE 0 0 NA B coding 437 1311 171 1481 PB.2670.1 chr3 + 2856 1 intergenic novelGene_1359 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 20 0 FALSE 0 0 NA A coding 103 309 357 665 PB.2905.12 chr4 - 5686 1 novel_in_catalog ANTXR2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 28 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1189.1 chr2 - 2594 21 full-splice_match NOL10 ENST00000381685.9 2589 21 -9 4 no_subtype FALSE canonical NA NA 181 None 6 8 0 FALSE 0 0 NA A coding 688 2064 116 2179 PB.6790.1 chr12 + 3064 20 full-splice_match USP5 ENST00000389231.9 3083 20 24 -5 no_subtype FALSE canonical NA NA 2422 None 143 5 0 FALSE 0 0 NA C coding 835 2505 9 2513 PB.6790.3 chr12 + 3143 20 full-splice_match USP5 ENST00000229268.12 3181 20 34 4 no_subtype FALSE canonical NA NA 2501 None 6 5 0 FALSE 0 0 NA C coding 858 2574 19 2592 PB.6790.4 chr12 + 3114 20 novel_not_in_catalog USP5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2472 None 2 7 0 FALSE 0 0 NA C coding 594 1782 22 1803 PB.11154.1 chrX - 3568 15 full-splice_match ENOX2 ENST00000394363.5 4174 15 87 519 no_subtype FALSE canonical NA NA 182 None 8 1 0 FALSE 0 0 NA C coding 577 1731 425 2155 PB.7726.1 chr14 + 5875 9 novel_not_in_catalog PELI2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5166 None 3 35 3 TRUE 0 0 NA A coding 420 1260 312 1571 PB.7726.2 chr14 + 1487 1 genic_intron novelGene_549 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2554.1 chr3 - 1046 6 full-splice_match LXN ENST00000264265.3 1116 6 60 10 no_subtype FALSE canonical NA NA 284 None 4 5 0 FALSE 0 0 NA A coding 222 666 156 821 PB.2461.2 chr3 - 4263 4 novel_not_in_catalog RAB43 novel NA NA NA NA no_subtype FALSE canonical NA NA 333 None 11 27 0 TRUE 0 0 NA C coding 212 636 130 765 PB.2578.1 chr3 - 1476 5 full-splice_match EIF5A2 ENST00000295822.6 5593 5 74 4043 no_subtype FALSE canonical NA NA 77 None 2 4 0 FALSE 0 0 NA A coding 153 459 113 571 PB.3366.1 chr5 - 3445 1 genic_intron novelGene_791 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11184.5 chrX - 1906 6 novel_in_catalog IDS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 270 None 2 10 0 FALSE 0 0 NA C coding 297 891 168 1058 PB.6633.2 chr11 + 2947 1 incomplete-splice_match ATM ENST00000452508.6 12954 64 10003 5 no_subtype FALSE canonical NA NA NA None 3 30 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.11184.3 chrX - 2373 9 full-splice_match IDS ENST00000340855.10 7619 9 7 5239 no_subtype TRUE canonical NA NA 306 None 58 7 0 FALSE 0 0 NA C coding 550 1650 204 1853 PB.8465.1 chr16 - 3277 4 novel_not_in_catalog XYLT1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 61 None 3 16 1 TRUE 0 0 NA B coding 122 366 2353 2718 PB.8465.2 chr16 - 1539 2 genic_intron novelGene_157 novel NA NA NA NA no_subtype FALSE canonical NA NA 535 None 2 9 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3813.15 chr6 - 3809 26 novel_in_catalog BAG6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 261 None 5 5 0 FALSE 0 0 NA C coding 1162 3486 275 3760 PB.7025.1 chr12 + 1399 7 full-splice_match CDK2 ENST00000266970.8 2296 7 3 894 no_subtype FALSE canonical NA NA 1029 None 3 0 0 FALSE 0 0 NA A coding 298 894 238 1131 PB.2528.2 chr3 - 2697 2 novel_not_in_catalog PFN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1405 None 2 18 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.3813.16 chr6 - 3569 24 full-splice_match BAG6 ENST00000362049.10 3626 24 40 17 no_subtype FALSE canonical NA NA 237 None 20 2 0 FALSE 0 0 NA C coding 1077 3231 251 3481 PB.2490.1 chr3 + 1720 4 full-splice_match NCK1 ENST00000481752.5 1971 4 46 205 no_subtype FALSE canonical NA NA 1057 None 7 4 0 FALSE 0 0 NA C coding 377 1131 119 1249 PB.6786.4 chr12 - 2648 9 novel_in_catalog ZNF384 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 111 None 2 9 0 FALSE 0 0 NA B coding 500 1500 177 1676 PB.6786.5 chr12 - 2804 9 novel_in_catalog ZNF384 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 267 None 2 12 0 FALSE 0 0 NA B coding 500 1500 333 1832 PB.8383.1 chr16 - 1746 7 full-splice_match RNPS1 ENST00000566458.5 2037 7 283 8 no_subtype FALSE canonical NA NA 60 None 38 5 0 FALSE 0 0 NA C coding 282 846 59 904 PB.10980.3 chrX + 3057 3 novel_not_in_catalog FAM156B novel NA NA NA NA no_subtype FALSE canonical NA NA 1610 None 3 8 0 FALSE 0 0 NA B coding 213 639 1728 2366 PB.6786.1 chr12 - 2815 11 novel_not_in_catalog ZNF384 novel NA NA NA NA no_subtype FALSE canonical NA NA 219 None 4 8 0 TRUE 0 0 NA B coding 516 1548 285 1832 PB.8383.4 chr16 - 2796 7 novel_in_catalog RNPS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 40 None 2 7 0 FALSE 0 0 NA C coding 128 384 1577 1960 PB.9416.1 chr17 + 2788 4 full-splice_match C1QTNF1 ENST00000579760.5 1672 4 192 -1308 no_subtype FALSE canonical NA NA 542 None 17 10 0 FALSE 0 0 NA C coding 281 843 248 1090 PB.3813.10 chr6 - 3606 25 novel_not_in_catalog BAG6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 256 None 3 12 3 TRUE 0 0 NA C coding 1112 3336 270 3605 PB.4585.5 chr7 + 1898 13 novel_in_catalog KMT2E novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1791 None 57 1 0 FALSE 0 0 NA B coding 470 1410 488 1897 PB.8202.2 chr15 - 1470 11 novel_not_in_catalog UBL7 novel NA NA NA NA no_subtype FALSE canonical NA NA 22 None 2 4 1 FALSE 0 0 NA C coding 248 744 619 1362 PB.8202.1 chr15 - 1343 11 full-splice_match UBL7 ENST00000361351.8 1360 11 3 14 no_subtype FALSE canonical NA NA 72 None 17 0 0 FALSE 0 0 NA C coding 380 1140 102 1241 PB.4585.4 chr7 + 1982 14 incomplete-splice_match KMT2E ENST00000476671.5 2523 15 -13 554 3prime_fragment FALSE canonical NA NA 1877 None 10 8 2 FALSE 0 0 NA B coding 469 1407 574 1980 PB.439.2 chr1 - 4288 14 novel_in_catalog ZZZ3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 109 None 2 7 1 FALSE 0 0 NA A coding 902 2706 449 3154 PB.439.3 chr1 - 2695 1 genic_intron novelGene_728 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10851.1 chrX - 1425 3 intergenic novelGene_23 novel NA NA NA NA no_subtype FALSE canonical NA NA 69 None 2 5 2 FALSE 0 0 NA A coding 110 330 382 711 PB.3275.1 chr5 + 2642 3 antisense novelGene_ELOVL7_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 46 None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9823.1 chr19 - 5707 23 full-splice_match ADGRL1 ENST00000361434.7 5610 23 -110 13 no_subtype FALSE canonical NA NA 295 None 2 22 0 FALSE 0 0 NA A coding 1469 4407 391 4797 PB.4847.1 chr8 - 3027 12 full-splice_match KCTD9 ENST00000221200.8 3401 12 186 188 no_subtype TRUE canonical NA NA 83 None 9 11 0 FALSE 0 0 NA A coding 389 1167 36 1202 PB.3275.2 chr5 + 2588 1 antisense novelGene_ELOVL7_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4181.1 chr6 - 2785 1 genic_intron novelGene_1223 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5114.2 chr8 - 3810 29 full-splice_match KIAA0196 ENST00000318410.11 4187 29 73 304 no_subtype FALSE canonical NA NA 153 None 37 4 1 FALSE 0 0 NA A coding 1159 3477 278 3754 PB.1340.2 chr2 - 2673 16 novel_not_in_catalog MTIF2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 398 None 16 4 1 TRUE 0 0 NA B coding 727 2181 473 2653 PB.1161.2 chr1 + 1560 13 novel_not_in_catalog SCCPDH novel NA NA NA NA no_subtype FALSE canonical NA NA 1284 None 2 9 0 TRUE 0 0 NA C coding 421 1263 33 1295 PB.4585.1 chr7 + 2112 15 novel_in_catalog KMT2E novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2003 None 2 4 0 FALSE 0 0 NA B coding 306 918 1195 2112 PB.661.2 chr1 - 3122 5 full-splice_match GOLPH3L ENST00000271732.7 2999 5 -130 7 no_subtype FALSE canonical NA NA 163 None 43 7 0 FALSE 0 0 NA C coding 285 855 176 1030 PB.4161.1 chr6 + 2609 1 incomplete-splice_match HECA ENST00000367658.2 5614 4 3002 4 no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7971.1 chr15 - 3035 1 genic_intron novelGene_284 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4661.1 chr7 - 2524 11 full-splice_match CEP41 ENST00000223208.9 6513 11 221 3768 no_subtype FALSE canonical NA NA 83 None 2 9 0 FALSE 0 0 NA A coding 373 1119 51 1169 PB.7124.1 chr12 + 3555 1 full-splice_match ATXN7L3B ENST00000519948.3 7604 1 60 3989 no_subtype FALSE canonical NA NA NA None 93 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1876.1 chr2 - 3012 1 novel_in_catalog DNPEP novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA C coding 100 300 1499 1798 PB.8518.1 chr16 + 2865 9 full-splice_match IL21R ENST00000337929.7 4849 9 13 1971 no_subtype FALSE canonical NA NA 1327 None 2 5 0 FALSE 0 0 NA C coding 538 1614 461 2074 PB.5489.2 chr9 - 1461 2 genic_intron novelGene_1068 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1012 None 2 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4761.2 chr7 + 2578 14 novel_not_in_catalog GALNT11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2145 None 2 12 1 TRUE 0 0 NA B coding 379 1137 801 1937 PB.665.2 chr1 - 4321 23 novel_not_in_catalog ARNT novel NA NA NA NA no_subtype FALSE canonical NA NA 57 None 4 10 1 TRUE 0 0 NA C coding 436 1308 1096 2403 PB.2624.1 chr3 + 2538 16 full-splice_match EIF2B5 ENST00000273783.7 2655 16 115 2 no_subtype FALSE canonical NA NA 2113 None 17 1 0 FALSE 0 0 NA C coding 721 2163 8 2170 PB.8546.1 chr16 + 4651 19 full-splice_match TAOK2 ENST00000279394.7 4246 19 -409 4 no_subtype FALSE canonical NA NA 3440 None 3 9 0 FALSE 0 0 NA A coding 1049 3147 813 3959 PB.7959.230 chr14 - 1566 11 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 81 None 2 15 5 TRUE 0 0 NA B coding 196 588 848 1435 PB.4641.1 chr7 - 4118 2 full-splice_match GCC1 ENST00000321407.2 4149 2 14 17 no_subtype FALSE canonical NA NA 1443 None 26 7 0 FALSE 0 0 NA A coding 775 2325 412 2736 PB.4113.3 chr6 + 3046 7 novel_not_in_catalog NCOA7 novel NA NA NA NA no_subtype FALSE canonical NA NA 577 None 46 14 1 TRUE 0 0 NA C coding 219 657 54 710 PB.3813.19 chr6 - 3607 24 novel_in_catalog BAG6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 261 None 14 14 1 FALSE 0 0 NA C coding 1077 3231 275 3505 PB.4477.1 chr7 + 761 3 incomplete-splice_match RSBN1L ENST00000334955.12 6422 8 19 5642 3prime_fragment FALSE canonical NA NA 711 None 3 2 0 FALSE 0 0 NA B coding 251 753 9 761 PB.7501.1 chr13 - 3523 18 full-splice_match INTS6 ENST00000311234.8 3662 18 -38 177 no_subtype FALSE canonical NA NA 622 None 6 4 0 FALSE 0 0 NA A coding 887 2661 512 3172 PB.9585.1 chr18 - 1596 1 incomplete-splice_match RNF152 ENST00000312828.3 9501 2 7882 24 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8639.1 chr16 + 1619 9 full-splice_match COQ9 ENST00000262507.10 1677 9 45 13 no_subtype FALSE canonical NA NA 945 None 40 4 0 FALSE 0 0 NA C coding 318 954 25 978 PB.8639.3 chr16 + 2865 6 novel_in_catalog COQ9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1948 None 2 18 0 FALSE 0 0 NA C coding 262 786 8 793 PB.431.3 chr1 - 2966 10 novel_not_in_catalog ANKRD13C novel NA NA NA NA no_subtype FALSE canonical NA NA 739 None 4 10 0 FALSE 0 0 NA C coding 352 1056 310 1365 PB.431.1 chr1 - 4067 13 full-splice_match ANKRD13C ENST00000370944.8 4069 13 -5 7 no_subtype FALSE canonical NA NA 749 None 8 10 0 FALSE 0 0 NA C coding 541 1623 320 1942 PB.2746.3 chr4 - 3404 3 novel_in_catalog ZNF518B novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 109 None 3 5 0 FALSE 0 0 NA C coding 896 2688 716 3403 PB.2947.4 chr4 + 5998 12 novel_not_in_catalog HERC5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4340 None 2 47 1 TRUE 0 0 NA B coding 349 1047 3417 4463 PB.7575.1 chr13 - 2448 6 full-splice_match ANKRD10 ENST00000267339.6 2495 6 42 5 no_subtype FALSE canonical NA NA 303 None 8 9 0 FALSE 0 0 NA C coding 420 1260 94 1353 PB.4493.3 chr7 - 1541 7 novel_in_catalog SRI novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 60 None 2 11 0 FALSE 0 0 NA C coding 109 327 1028 1354 PB.4493.2 chr7 - 1864 8 novel_not_in_catalog SRI novel NA NA NA NA no_subtype TRUE canonical NA NA 69 None 5 14 2 FALSE 0 0 NA C coding 109 327 286 612 PB.4493.1 chr7 - 834 8 full-splice_match SRI ENST00000265729.6 2010 8 -5 1181 no_subtype FALSE canonical NA NA 109 None 19 5 0 FALSE 0 0 NA C coding 198 594 59 652 PB.8393.1 chr16 - 1934 10 novel_not_in_catalog BICDL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 40 None 3 1 0 FALSE 0 0 NA B coding 508 1524 55 1578 PB.8393.2 chr16 - 1683 1 novel_in_catalog BICDL2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA B coding 124 372 1266 1637 PB.4493.4 chr7 - 1547 7 novel_not_in_catalog SRI novel NA NA NA NA no_subtype FALSE canonical NA NA 69 None 3 12 1 FALSE 0 0 NA C coding 109 327 1037 1363 PB.7415.1 chr13 + 1521 2 genic_intron novelGene_286 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 302 None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4863.1 chr8 - 2984 1 incomplete-splice_match KIF13B ENST00000524189.5 8745 40 5756 6 no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.576.1 chr1 - 1730 7 novel_not_in_catalog RHOC novel NA NA NA NA no_subtype FALSE canonical NA NA 27 None 2 7 1 TRUE 0 0 NA B coding 193 579 35 613 PB.5021.1 chr8 - 3393 1 incomplete-splice_match TP53INP1 ENST00000448464.6 5631 5 2235 4 no_subtype FALSE canonical NA NA NA None 7 28 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2550.1 chr3 + 3856 6 full-splice_match TIPARP ENST00000295924.11 4109 6 248 5 no_subtype FALSE canonical NA NA 1774 None 8 6 0 FALSE 0 0 NA A coding 657 1971 249 2219 PB.3270.1 chr5 + 2851 12 novel_not_in_catalog GPBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2365 None 3 5 1 FALSE 0 0 NA C coding 473 1419 1103 2521 PB.706.1 chr1 + 2615 2 antisense novelGene_ADAR_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1044 None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4775.1 chr7 - 3900 28 full-splice_match NCAPG2 ENST00000356309.7 3930 28 26 4 no_subtype FALSE canonical NA NA 80 None 20 2 0 FALSE 0 0 NA C coding 1143 3429 120 3548 PB.4775.2 chr7 - 3946 29 novel_in_catalog NCAPG2 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical NA NA 25 None 6 4 1 FALSE 0 0 NA C coding 1143 3429 166 3594 PB.2307.2 chr3 - 2754 1 genic_intron novelGene_689 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6055.1 chr10 - 1494 12 full-splice_match TIAL1 ENST00000369093.6 5072 12 -206 3784 no_subtype FALSE canonical NA NA 268 None 10 0 0 FALSE 0 0 NA C coding 392 1176 237 1412 PB.7536.1 chr13 + 2712 8 full-splice_match NDFIP2 ENST00000620924.1 2324 8 -196 -192 no_subtype FALSE canonical NA NA 939 None 2 9 0 FALSE 0 0 NA A coding 242 726 209 934 PB.4080.3 chr6 + 2806 3 novel_not_in_catalog FIG4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1064 None 6 13 1 TRUE 0 0 NA C coding 106 318 132 449 PB.9873.1 chr19 + 971 5 full-splice_match CCDC124 ENST00000445755.6 938 5 1 -34 no_subtype FALSE canonical NA NA 507 None 3 3 1 FALSE 0 0 NA A coding 223 669 44 712 PB.1522.1 chr2 + 2766 1 incomplete-splice_match MAP4K4 ENST00000302217.9 6624 26 3857 2 no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA B coding 173 519 899 1417 PB.8522.7 chr16 - 3986 23 novel_in_catalog XPO6 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 148 None 8 3 0 FALSE 0 0 NA B coding 1111 3333 97 3429 PB.8522.5 chr16 - 3680 20 novel_not_in_catalog XPO6 novel NA NA NA NA no_subtype FALSE canonical NA NA 312 None 5 3 0 FALSE 0 0 NA B coding 992 2976 147 3122 PB.3694.2 chr5 - 2037 3 antisense novelGene_CANX_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 20 None 2 10 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.3694.1 chr5 - 1530 1 antisense novelGene_CANX_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 20 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6556.1 chr11 - 3152 25 novel_not_in_catalog INTS4 novel NA NA NA NA no_subtype FALSE canonical NA NA 95 None 43 2 1 TRUE 0 0 NA A coding 963 2889 42 2930 PB.1856.1 chr2 - 1786 11 full-splice_match AAMP ENST00000248450.8 1886 11 89 11 no_subtype FALSE canonical NA NA 203 None 84 0 0 FALSE 0 0 NA C coding 434 1302 83 1384 PB.3789.1 chr6 + 1458 5 novel_not_in_catalog LRRC16A novel NA NA NA NA no_subtype TRUE canonical NA NA 1064 None 2 6 0 TRUE 0 0 NA A coding 114 342 8 349 PB.4467.1 chr7 + 2419 15 incomplete-splice_match POR ENST00000461988.5 2522 16 101 2 internal_fragment FALSE canonical NA NA 1902 None 3 6 0 FALSE 0 0 NA B coding 680 2040 5 2044 PB.729.1 chr1 - 2659 11 novel_in_catalog YY1AP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 42 None 2 6 2 FALSE 0 0 NA B coding 750 2250 194 2443 PB.3636.2 chr5 + 6075 53 novel_not_in_catalog DOCK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5492 None 2 15 2 TRUE 0 0 NA B coding 1824 5472 81 5552 PB.8867.2 chr17 + 1697 10 full-splice_match RNF167 ENST00000262482.10 1915 10 210 8 no_subtype FALSE canonical NA NA 1197 None 34 2 0 FALSE 0 0 NA C coding 350 1050 447 1496 PB.8867.3 chr17 + 1548 9 full-splice_match RNF167 ENST00000575111.5 1757 9 227 -18 no_subtype FALSE canonical NA NA 1053 None 9 2 0 FALSE 0 0 NA C coding 350 1050 303 1352 PB.8867.1 chr17 + 1800 10 novel_in_catalog RNF167 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 1305 None 6 3 0 FALSE 0 0 NA C coding 350 1050 555 1604 PB.6881.1 chr12 + 1570 1 incomplete-splice_match PPFIBP1 ENST00000537927.5 5719 27 4136 14 no_subtype FALSE canonical NA NA NA None 14 10 0 FALSE 0 0 NA A coding 110 330 53 382 PB.8867.4 chr17 + 1221 8 novel_in_catalog RNF167 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 726 None 2 1 0 FALSE 0 0 NA C coding 315 945 81 1025 PB.2113.1 chr3 + 3624 15 full-splice_match CTNNB1 ENST00000349496.9 3737 15 101 12 no_subtype FALSE canonical NA NA 2316 None 75 6 0 FALSE 0 0 NA C coding 781 2343 180 2522 PB.2113.2 chr3 + 3195 16 full-splice_match CTNNB1 ENST00000396183.7 3268 16 71 2 no_subtype FALSE canonical NA NA 2572 None 58 5 0 FALSE 0 0 NA C coding 781 2343 215 2557 PB.2113.3 chr3 + 3261 16 full-splice_match CTNNB1 ENST00000396185.7 3356 16 93 2 no_subtype FALSE canonical NA NA 2479 None 41 7 0 FALSE 0 0 NA C coding 781 2343 122 2464 PB.10754.1 chr22 - 3543 10 novel_not_in_catalog TMEM184B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 129 None 11 21 1 TRUE 0 0 NA C coding 407 1221 188 1408 PB.2113.5 chr3 + 3004 16 novel_not_in_catalog CTNNB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2630 None 3 17 1 TRUE 0 0 NA C coding 781 2343 215 2557 PB.2113.6 chr3 + 2690 1 genic_intron novelGene_412 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1398.1 chr2 + 1405 6 full-splice_match SNRNP27 ENST00000244227.7 1802 6 400 -3 no_subtype FALSE canonical NA NA 438 None 6 8 0 FALSE 0 0 NA A coding 155 465 26 490 PB.10484.2 chr20 - 1941 4 novel_not_in_catalog HELZ2 novel NA NA NA NA no_subtype FALSE canonical NA NA 44 None 2 4 0 FALSE 0 0 NA B coding 171 513 930 1442 PB.5013.2 chr8 + 3231 3 antisense novelGene_CDH17_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3160 None 2 20 1 FALSE 0 0 NA A coding 122 366 729 1094 PB.10924.1 chrX + 1909 1 antisense novelGene_CASK_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6125.1 chr11 + 4131 30 novel_not_in_catalog MUC2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3910 None 6 6 1 TRUE 0 0 NA B coding 1368 4104 28 4131 PB.8236.1 chr15 + 3160 8 full-splice_match DNAJA4 ENST00000394855.7 3245 8 77 8 no_subtype FALSE canonical NA NA 1216 None 4 13 0 FALSE 0 0 NA A coding 426 1278 152 1429 PB.5013.8 chr8 - 3685 1 novel_in_catalog CDH17 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5013.9 chr8 - 3539 8 novel_in_catalog CDH17 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 73 None 3 18 0 FALSE 0 0 NA C coding 356 1068 94 1161 PB.9250.3 chr17 + 2659 12 novel_not_in_catalog SCPEP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2080 None 2 35 1 FALSE 0 0 NA C coding 293 879 30 908 PB.6974.1 chr12 - 3752 17 full-splice_match SLC11A2 ENST00000547198.5 2486 17 -53 -1213 no_subtype FALSE canonical NA NA 77 None 5 8 0 FALSE 0 0 NA C coding 568 1704 116 1819 PB.873.1 chr1 + 1529 1 antisense novelGene_RC3H1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 10 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3608.1 chr5 + 2688 9 novel_not_in_catalog CNOT8 novel NA NA NA NA no_subtype FALSE canonical NA NA 1198 None 2 13 1 TRUE 0 0 NA B coding 292 876 470 1345 PB.4331.1 chr7 + 6254 2 genic_intron novelGene_229 novel NA NA NA NA no_subtype FALSE canonical NA NA 1988 None 2 31 0 FALSE 0 0 NA A coding 156 468 2805 3272 PB.7110.1 chr12 + 1460 7 full-splice_match YEATS4 ENST00000247843.6 1434 7 60 -86 no_subtype FALSE canonical NA NA 724 None 2 4 0 FALSE 0 0 NA A coding 227 681 211 891 PB.906.2 chr1 + 3000 1 novel_in_catalog NPL novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 16 21 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9782.1 chr19 + 1496 8 novel_not_in_catalog CNN1 novel NA NA NA NA no_subtype TRUE canonical NA NA 723 None 584 4 0 TRUE 0 0 NA A coding 297 891 76 966 PB.9862.1 chr19 + 1853 9 full-splice_match GTPBP3 ENST00000324894.12 2579 9 3 723 no_subtype FALSE canonical NA NA 1318 None 4 0 0 FALSE 0 0 NA A coding 492 1476 66 1541 PB.4567.1 chr7 - 2060 1 genic_intron novelGene_921 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10212.1 chr19 + 2556 1 antisense novelGene_MZF1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 7 0 FALSE 0 0 NA A coding 136 408 1219 1626 PB.5388.3 chr9 - 2980 2 genic_intron novelGene_882 novel NA NA NA NA no_subtype FALSE canonical NA NA 2518 None 4 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5388.2 chr9 - 3010 6 full-splice_match ZNF510 ENST00000223428.8 5154 6 -18 2162 no_subtype FALSE canonical NA NA 31 None 6 8 1 FALSE 0 0 NA C coding 512 1536 721 2256 PB.5388.1 chr9 - 6427 8 novel_not_in_catalog ZNF510 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 31 None 2 42 2 TRUE 0 0 NA C coding 512 1536 721 2256 PB.2132.2 chr3 + 2873 2 genic_intron novelGene_437 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 56 None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9005.1 chr17 + 4081 6 novel_in_catalog TRAF4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2951 None 2 19 0 FALSE 0 0 NA A coding 352 1056 2526 3581 PB.2207.1 chr3 + 1637 9 full-splice_match GNAI2 ENST00000313601.10 2464 9 359 468 no_subtype FALSE canonical NA NA 1117 None 2 3 0 FALSE 0 0 NA C coding 355 1065 26 1090 PB.4595.9 chr7 + 1564 9 full-splice_match HBP1 ENST00000463202.5 2646 9 0 1082 no_subtype FALSE canonical NA NA 1401 None 4 0 0 FALSE 0 0 NA C coding 514 1542 17 1558 PB.3257.5 chr5 - 1542 6 full-splice_match PLPP1 ENST00000307259.8 1597 6 88 -33 no_subtype FALSE canonical NA NA 391 None 3 4 0 FALSE 0 0 NA C coding 284 852 334 1185 PB.8175.1 chr15 + 1232 1 incomplete-splice_match SMAD3 ENST00000327367.8 6247 9 5013 3 no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A coding 16 48 301 348 PB.4950.1 chr8 - 1940 7 full-splice_match ARMC1 ENST00000276569.7 3032 7 18 1074 no_subtype FALSE canonical NA NA 192 None 46 7 0 FALSE 0 0 NA A coding 275 825 249 1073 PB.3257.1 chr5 + 3839 27 full-splice_match SKIV2L2 ENST00000230640.9 4192 27 231 122 no_subtype FALSE canonical NA NA 3099 None 32 6 0 FALSE 0 0 NA C coding 1042 3126 24 3149 PB.3257.2 chr5 + 3957 28 novel_not_in_catalog SKIV2L2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3100 None 2 9 0 TRUE 0 0 NA C coding 1042 3126 25 3150 PB.7959.24 chr14 - 1504 9 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 17 5 TRUE 0 0 NA B coding 98 294 11 304 PB.7959.25 chr14 - 1512 8 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 83 None 2 13 2 TRUE 0 0 NA B coding 261 783 680 1462 PB.7959.26 chr14 - 1504 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 16 2 TRUE 0 0 NA B coding 261 783 672 1454 PB.7959.27 chr14 - 1429 8 fusion IGHA1,IGHV1-3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 50 None 2 16 4 TRUE 0 0 NA B coding 254 762 618 1379 PB.7959.20 chr14 - 1520 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 116 None 2 17 2 TRUE 0 0 NA B coding 246 738 50 787 PB.5003.2 chr8 + 2668 7 novel_in_catalog CPNE3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 603 None 2 22 0 FALSE 0 0 NA C coding 184 552 145 696 PB.5003.1 chr8 + 2863 17 full-splice_match CPNE3 ENST00000517490.5 4865 17 11 1991 no_subtype FALSE canonical NA NA 1643 None 5 7 0 FALSE 0 0 NA C coding 537 1611 153 1763 PB.7959.23 chr14 - 1454 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 15 3 TRUE 0 0 NA B coding 251 753 651 1403 PB.1443.1 chr2 - 1303 10 full-splice_match CAPG ENST00000409724.5 1151 10 -14 -138 no_subtype FALSE canonical NA NA 105 None 3 0 0 FALSE 0 0 NA C coding 348 1044 119 1162 PB.7959.28 chr14 - 1543 7 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 118 None 2 18 2 TRUE 0 0 NA B coding 254 762 732 1493 PB.8272.25 chr15 + 6294 10 novel_in_catalog AKAP13 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1571 None 2 50 0 FALSE 0 0 NA B coding 511 1533 86 1618 PB.3566.2 chr5 + 3879 4 novel_not_in_catalog GRPEL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2224 None 3 28 1 TRUE 0 0 NA B coding 122 366 20 385 PB.8272.26 chr15 + 5743 8 novel_not_in_catalog AKAP13 novel NA NA NA NA no_subtype FALSE canonical NA NA 1016 None 3 39 0 TRUE 0 0 NA B coding 306 918 146 1063 PB.1713.1 chr2 - 3367 13 full-splice_match KIAA1715 ENST00000272748.8 7610 13 73 4170 no_subtype FALSE canonical NA NA 113 None 11 6 0 FALSE 0 0 NA A coding 428 1284 176 1459 PB.8272.23 chr15 + 6298 12 novel_not_in_catalog AKAP13 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2648 None 2 44 0 TRUE 0 0 NA B coding 511 1533 159 1691 PB.8272.22 chr15 + 6502 12 incomplete-splice_match AKAP13 ENST00000394510.6 9128 29 2618 8 internal_fragment FALSE canonical NA NA 1779 None 5 41 0 FALSE 0 0 NA B coding 600 1800 27 1826 PB.1432.3 chr2 + 3349 12 novel_not_in_catalog TTC31 novel NA NA NA NA no_subtype FALSE canonical NA NA 2051 None 2 8 0 TRUE 0 0 NA B coding 248 744 22 765 PB.8272.29 chr15 + 2418 1 incomplete-splice_match AKAP13 ENST00000394510.6 9128 29 6678 33 no_subtype FALSE canonical NA NA NA None 19 23 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1383.1 chr2 + 1304 1 full-splice_match AC007318.5 ENST00000467568.2 881 1 -133 -290 no_subtype FALSE canonical NA NA NA None 3 2 0 FALSE 0 0 NA A coding 282 846 168 1013 PB.11195.2 chrX - 1315 8 full-splice_match BCAP31 ENST00000345046.10 1589 8 270 4 no_subtype FALSE canonical NA NA 94 None 29 3 0 FALSE 0 0 NA A coding 246 738 139 876 PB.2989.1 chr4 - 1175 12 full-splice_match PPA2 ENST00000341695.9 1684 12 8 501 no_subtype FALSE canonical NA NA 181 None 3 1 0 FALSE 0 0 NA C coding 334 1002 24 1025 PB.2989.3 chr4 - 1602 1 genic PPA2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3969.5 chr6 - 2983 3 novel_not_in_catalog ELOVL5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2877 None 2 23 2 TRUE 0 0 NA C coding 108 324 2568 2891 PB.7587.1 chr13 + 2036 21 novel_not_in_catalog CDC16 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1923 None 2 2 1 TRUE 0 0 NA A coding 620 1860 33 1892 PB.8786.1 chr16 + 2923 13 novel_not_in_catalog KIAA0513 novel NA NA NA NA no_subtype FALSE canonical NA NA 2842 None 8 17 1 TRUE 0 0 NA B coding 401 1203 243 1445 PB.10112.1 chr19 + 3345 23 full-splice_match AP2A1 ENST00000354293.9 3388 23 46 -3 no_subtype TRUE canonical NA NA 2910 None 84 3 0 FALSE 0 0 NA A coding 955 2865 121 2985 PB.2745.1 chr4 - 2137 15 full-splice_match WDR1 ENST00000499869.6 3054 15 97 820 no_subtype FALSE canonical NA NA 113 None 429 0 0 FALSE 0 0 NA A coding 606 1818 98 1915 PB.4787.1 chr8 - 3756 3 full-splice_match MFHAS1 ENST00000276282.6 6414 3 606 2052 no_subtype FALSE canonical NA NA 2979 None 4 3 0 FALSE 0 0 NA A coding 797 2391 747 3137 PB.1008.4 chr1 - 1649 13 novel_in_catalog EIF2D novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 182 None 4 1 0 FALSE 0 0 NA C coding 507 1521 127 1647 PB.403.3 chr1 - 3001 3 antisense novelGene_NFIA_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 24 None 8 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.403.2 chr1 - 2977 2 antisense novelGene_NFIA_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 23 None 6 11 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.2873.8 chr4 - 3208 2 genic_intron novelGene_686 novel NA NA NA NA no_subtype FALSE canonical NA NA 226 None 2 21 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.1008.2 chr1 - 1993 15 full-splice_match EIF2D ENST00000271764.6 2005 15 4 8 no_subtype FALSE canonical NA NA 169 None 15 0 0 FALSE 0 0 NA C coding 584 1752 114 1865 PB.1008.3 chr1 - 1468 1 novel_in_catalog EIF2D novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA C coding 40 120 192 311 PB.9716.2 chr19 + 3140 22 novel_not_in_catalog ADGRE1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3120 None 5 6 0 TRUE 0 0 NA B coding 797 2391 27 2417 PB.2636.2 chr3 - 1437 1 genic_intron novelGene_1347 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2998.2 chr4 + 2003 1 genic_intron novelGene_970 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.247 chr14 - 1722 7 novel_not_in_catalog IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 41 None 5 2 0 TRUE 0 0 NA B coding 396 1188 277 1464 PB.4022.6 chr6 - 2537 11 full-splice_match SYNCRIP ENST00000369622.7 3023 11 370 116 no_subtype FALSE canonical NA NA 119 None 5 1 0 FALSE 0 0 NA C coding 623 1869 132 2000 PB.8891.1 chr17 - 1381 8 full-splice_match CTDNEP1 ENST00000574322.5 1708 8 319 8 no_subtype FALSE canonical NA NA 162 None 2 4 0 FALSE 0 0 NA A coding 244 732 61 792 PB.6873.1 chr12 + 1501 3 full-splice_match SSPN ENST00000538142.5 553 3 38 -986 no_subtype FALSE canonical NA NA 211 None 2 9 0 FALSE 0 0 NA C coding 140 420 155 574 PB.11005.12 chrX + 1236 1 incomplete-splice_match MSN ENST00000360270.6 3944 13 2706 3 no_subtype FALSE canonical NA NA NA None 15 3 0 FALSE 0 0 NA B coding 99 297 310 606 PB.8160.2 chr15 + 2124 2 genic_intron novelGene_619 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1654 None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3969.2 chr6 - 1465 8 full-splice_match ELOVL5 ENST00000304434.10 2827 8 70 1292 no_subtype FALSE canonical NA NA 121 None 401 2 0 FALSE 0 0 NA C coding 299 897 130 1026 PB.3142.2 chr4 + 5512 3 genic_intron novelGene_1344 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5398 None 7 29 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6962.1 chr12 + 3205 13 full-splice_match SMARCD1 ENST00000394963.8 3658 13 380 73 no_subtype FALSE canonical NA NA 1512 None 10 11 0 FALSE 0 0 NA C coding 515 1545 19 1563 PB.1938.1 chr2 - 4138 29 novel_not_in_catalog COL6A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 150 None 2 15 1 TRUE 0 0 NA B coding 993 2979 403 3381 PB.4938.5 chr8 + 3205 4 novel_in_catalog SDCBP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2056 None 3 24 0 FALSE 0 0 NA C coding 111 333 1776 2108 PB.9716.1 chr19 + 3100 20 novel_not_in_catalog ADGRE1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2800 None 21 6 0 TRUE 0 0 NA B coding 797 2391 9 2399 PB.4938.3 chr8 + 2016 8 novel_in_catalog SDCBP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 860 None 9 7 0 FALSE 0 0 NA C coding 298 894 19 912 PB.10107.1 chr19 + 1352 7 full-splice_match FCGRT ENST00000221466.9 1798 7 442 4 no_subtype FALSE canonical NA NA 1032 None 180 0 0 FALSE 0 0 NA C coding 365 1095 45 1139 PB.11166.2 chrX + 3764 5 full-splice_match ZNF449 ENST00000339249.4 3773 5 0 9 no_subtype FALSE canonical NA NA 813 None 3 16 0 FALSE 0 0 NA A coding 518 1554 141 1694 PB.7959.240 chr14 - 1576 13 fusion IGHV5-51,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 103 None 2 16 6 TRUE 0 0 NA B coding 196 588 863 1450 PB.6216.2 chr11 - 3359 24 novel_not_in_catalog COPB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 40 None 2 11 1 TRUE 0 0 NA B coding 953 2859 188 3046 PB.6216.3 chr11 - 3294 23 novel_not_in_catalog COPB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 106 None 6 7 0 TRUE 0 0 NA B coding 953 2859 164 3022 PB.7834.1 chr14 - 2477 20 full-splice_match VIPAS39 ENST00000557658.5 2562 20 84 1 no_subtype FALSE canonical NA NA 62 None 5 1 0 FALSE 0 0 NA A coding 493 1479 63 1541 PB.6216.1 chr11 - 3299 23 novel_not_in_catalog COPB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 79 None 128 4 0 TRUE 0 0 NA B coding 953 2859 137 2995 PB.1240.6 chr2 + 3313 13 full-splice_match ZNF512 ENST00000556601.5 3543 13 104 126 no_subtype FALSE canonical NA NA 1376 None 4 5 1 FALSE 0 0 NA C coding 488 1464 219 1682 PB.87.3 chr1 + 1855 8 novel_not_in_catalog NECAP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 620 None 2 6 1 TRUE 0 0 NA B coding 167 501 18 518 PB.6216.4 chr11 - 1678 14 novel_not_in_catalog COPB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 151 None 2 2 0 TRUE 0 0 NA B coding 490 1470 209 1678 PB.87.1 chr1 + 2029 8 novel_not_in_catalog NECAP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 796 None 58 5 1 FALSE 0 0 NA B coding 223 669 50 718 PB.10029.1 chr19 - 2693 10 novel_in_catalog LIPE novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 49 None 10 6 0 FALSE 0 0 NA A coding 786 2358 37 2394 PB.10389.1 chr20 + 1628 14 full-splice_match IFT52 ENST00000373030.7 1757 14 46 83 no_subtype FALSE canonical NA NA 1350 None 11 2 1 FALSE 0 0 NA A coding 437 1311 85 1395 PB.1697.1 chr2 - 2770 4 genic_intron novelGene_1316 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 63 None 2 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4728.1 chr7 - 2399 10 novel_not_in_catalog TPK1 novel NA NA NA NA no_subtype TRUE canonical NA NA 86 None 2 14 2 TRUE 0 0 NA A coding 243 729 103 831 PB.1000.1 chr1 - 3384 5 full-splice_match SLC45A3 ENST00000367145.3 3341 5 -47 4 no_subtype FALSE canonical NA NA 113 None 26 13 0 FALSE 0 0 NA C coding 553 1659 344 2002 PB.1000.2 chr1 - 3354 5 novel_not_in_catalog SLC45A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 84 None 9 16 0 FALSE 0 0 NA C coding 553 1659 315 1973 PB.1000.3 chr1 - 4019 4 novel_in_catalog SLC45A3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 43 None 20 17 0 FALSE 0 0 NA C coding 397 1191 274 1464 PB.3235.1 chr5 + 2764 1 novel_in_catalog RP11-159F24.3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1142.1 chr1 - 1596 10 full-splice_match FH ENST00000366560.3 1797 10 7 194 no_subtype FALSE canonical NA NA 164 None 30 0 0 FALSE 0 0 NA A coding 510 1530 33 1562 PB.6747.1 chr11 - 1580 1 genic_intron novelGene_1156 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4202.1 chr6 - 2762 23 novel_not_in_catalog SYNE1 novel NA NA NA NA no_subtype TRUE canonical NA NA 257 None 4 1 0 TRUE 0 0 NA B coding 760 2280 481 2760 PB.1906.2 chr2 - 1892 15 novel_not_in_catalog SP110 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 86 None 4 5 1 TRUE 0 0 NA B coding 517 1551 88 1638 PB.6323.1 chr11 + 1966 1 genic_intron novelGene_475 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 25 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.266.22 chr1 - 3171 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 5 5 1 FALSE 0 0 NA C coding 825 2475 431 2905 PB.266.20 chr1 - 3143 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 62 None 2 22 2 TRUE 0 0 NA C coding 836 2508 323 2830 PB.266.25 chr1 - 2986 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 55 None 2 9 1 TRUE 0 0 NA C coding 836 2508 200 2707 PB.1020.1 chr1 - 5596 1 full-splice_match C1orf132 ENST00000385231.3 88 1 -5244 -264 no_subtype FALSE canonical NA NA NA None 2 32 0 FALSE 0 0 NA C coding 100 300 4960 5259 PB.4266.1 chr7 + 1575 1 genic MAFK novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.959.1 chr1 + 1641 6 full-splice_match TIMM17A ENST00000367287.4 1659 6 19 -1 no_subtype FALSE canonical NA NA 447 None 24 3 0 FALSE 0 0 NA C coding 171 513 18 530 PB.266.28 chr1 - 3212 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 65 None 2 10 2 TRUE 0 0 NA C coding 836 2508 428 2935 PB.5179.4 chr8 + 2884 12 novel_in_catalog PPP1R16A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2291 None 3 6 0 FALSE 0 0 NA B coding 528 1584 1089 2672 PB.9487.1 chr18 + 1586 13 novel_not_in_catalog NAPG novel NA NA NA NA no_subtype FALSE canonical NA NA 861 None 2 14 0 TRUE 0 0 NA A coding 312 936 67 1002 PB.9455.1 chr17 + 1537 11 full-splice_match NARF ENST00000309794.15 3949 11 135 2277 no_subtype FALSE canonical NA NA 1192 None 27 1 0 FALSE 0 0 NA A coding 456 1368 64 1431 PB.7906.1 chr14 + 2968 2 genic_intron novelGene_901 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1780 None 4 23 0 FALSE 0 0 NA A coding 134 402 67 468 PB.10480.1 chr20 - 3176 2 novel_not_in_catalog YTHDF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1306 None 4 28 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.9621.1 chr19 - 2765 14 full-splice_match MIER2 ENST00000264819.6 6884 14 -14 4133 no_subtype FALSE canonical NA NA 23 None 59 13 0 FALSE 0 0 NA C coding 545 1635 15 1649 PB.8645.2 chr16 + 2605 12 full-splice_match ADGRG3 ENST00000333493.8 2728 12 119 4 no_subtype TRUE canonical NA NA 1582 None 10 7 0 FALSE 0 0 NA A coding 549 1647 43 1689 PB.10480.2 chr20 - 2927 4 novel_in_catalog YTHDF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 27 None 2 19 0 FALSE 0 0 NA B coding 509 1527 126 1652 PB.9772.1 chr19 - 2084 10 full-splice_match YIPF2 ENST00000586748.5 1550 10 30 -564 no_subtype FALSE canonical NA NA 113 None 7 9 0 FALSE 0 0 NA A coding 316 948 144 1091 PB.2494.3 chr3 - 2694 10 novel_not_in_catalog PIK3CB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 179 None 2 22 1 TRUE 0 0 NA B coding 452 1356 319 1674 PB.6251.3 chr11 + 2821 2 genic_intron novelGene_306 novel NA NA NA NA no_subtype FALSE canonical NA NA 1771 None 3 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2950.1 chr4 - 2862 1 genic_intron novelGene_800 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3243.5 chr5 + 1622 1 genic_intron novelGene_505 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9579.3 chr18 + 2789 2 genic_intron novelGene_562 novel NA NA NA NA no_subtype FALSE canonical NA NA 375 None 3 8 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9738.13 chr19 - 3709 28 novel_in_catalog MYO1F novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 140 None 7 4 1 FALSE 0 0 NA C coding 1053 3159 138 3296 PB.3495.4 chr5 - 1908 10 novel_not_in_catalog H2AFY novel NA NA NA NA no_subtype FALSE canonical NA NA 168 None 79 5 0 TRUE 0 0 NA C coding 371 1113 202 1314 PB.3495.5 chr5 - 1874 10 novel_not_in_catalog H2AFY novel NA NA NA NA no_subtype FALSE non_canonical NA NA 169 None 3 13 2 TRUE 0 0 NA C coding 199 597 203 799 PB.6579.2 chr11 + 1552 12 novel_not_in_catalog EED novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1216 None 12 1 1 TRUE 0 0 NA C coding 324 972 17 988 PB.5446.1 chr9 - 3048 5 novel_not_in_catalog ZFP37 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 248 None 2 10 1 TRUE 0 0 NA A coding 630 1890 117 2006 PB.7981.2 chr15 - 2675 11 novel_not_in_catalog KATNBL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 85 None 19 7 0 TRUE 0 0 NA C coding 304 912 100 1011 PB.7981.3 chr15 - 1592 10 full-splice_match KATNBL1 ENST00000256544.7 2723 10 -8 1139 no_subtype FALSE canonical NA NA 137 None 2 3 0 FALSE 0 0 NA C coding 304 912 152 1063 PB.7981.6 chr15 - 2858 1 novel_in_catalog KATNBL1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7981.7 chr15 - 3362 5 full-splice_match KATNBL1 ENST00000560671.5 924 5 -17 -2421 no_subtype FALSE canonical NA NA 128 None 2 15 0 FALSE 0 0 NA C coding 186 558 143 700 PB.6610.1 chr11 - 2521 1 incomplete-splice_match TMEM123 ENST00000361236.7 3321 4 795 6 no_subtype FALSE canonical NA NA NA None 8 24 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3576.3 chr5 - 3871 21 novel_in_catalog CSF1R novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 236 None 297 19 0 FALSE 0 0 NA B coding 972 2916 188 3103 PB.3576.4 chr5 - 3378 19 incomplete-splice_match CSF1R ENST00000286301.7 3989 22 601 10 5prime_fragment FALSE canonical NA NA 283 None 5 9 0 FALSE 0 0 NA B coding 824 2472 136 2607 PB.6610.2 chr11 - 1580 5 full-splice_match TMEM123 ENST00000398136.6 3579 5 30 1969 no_subtype FALSE canonical NA NA 491 None 320 12 1 FALSE 0 0 NA C coding 208 624 392 1015 PB.7747.7 chr14 + 2782 1 genic_intron novelGene_590 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9704.2 chr19 - 3221 1 genic_intron novelGene_40 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A coding 36 108 234 341 PB.2378.2 chr3 - 1843 1 genic_intron novelGene_1007 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6307.5 chr11 - 2800 18 novel_not_in_catalog ARFGAP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 98 None 17 14 1 TRUE 0 0 NA B coding 535 1605 27 1631 PB.9039.1 chr17 + 5447 23 novel_not_in_catalog NF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 3639 None 2 11 0 FALSE 0 0 NA B coding 1027 3081 699 3779 PB.7618.1 chr14 + 1551 2 full-splice_match C14orf119 ENST00000319074.5 3660 2 765 1344 no_subtype FALSE canonical NA NA 90 None 11 7 0 FALSE 0 0 NA A coding 140 420 92 511 PB.3697.3 chr5 - 1673 2 novel_in_catalog RNF130 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 285 None 2 8 0 FALSE 0 0 NA C coding 151 453 39 491 PB.1467.1 chr2 - 1626 2 genic_intron novelGene_793 novel NA NA NA NA no_subtype FALSE canonical NA NA 1397 None 3 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2378.1 chr3 - 3335 18 novel_not_in_catalog SPICE1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 97 None 2 7 1 TRUE 0 0 NA A coding 855 2565 100 2664 PB.6307.2 chr11 - 2666 16 novel_not_in_catalog ARFGAP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 138 None 2 13 1 TRUE 0 0 NA B coding 476 1428 67 1494 PB.1294.1 chr2 + 3577 25 novel_not_in_catalog EML4 novel NA NA NA NA no_subtype TRUE canonical NA NA 2685 None 34 5 0 TRUE 0 0 NA C coding 981 2943 214 3156 PB.7347.1 chr12 - 2637 4 full-splice_match VPS37B ENST00000267202.6 3028 4 373 18 no_subtype FALSE canonical NA NA 120 None 2 12 0 FALSE 0 0 NA C coding 285 855 10 864 PB.2482.1 chr3 - 4146 10 full-splice_match AMOTL2 ENST00000249883.9 4488 10 60 282 no_subtype FALSE canonical NA NA 193 None 5 9 0 FALSE 0 0 NA A coding 780 2340 255 2594 PB.1294.2 chr2 + 5494 23 full-splice_match EML4 ENST00000318522.9 5549 23 49 6 no_subtype FALSE canonical NA NA 2685 None 2 23 2 FALSE 0 0 NA C coding 981 2943 214 3156 PB.4022.5 chr6 - 2555 11 novel_in_catalog SYNCRIP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 122 None 2 3 0 FALSE 0 0 NA C coding 623 1869 135 2003 PB.11206.40 chrX - 8098 46 novel_not_in_catalog FLNA novel NA NA NA NA no_subtype FALSE canonical NA NA 485 None 16 2 0 FALSE 0 0 NA C coding 2557 7671 113 7783 PB.8169.1 chr15 - 1109 3 full-splice_match SNAPC5 ENST00000565465.1 1069 3 -17 -23 no_subtype FALSE canonical NA NA 287 None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8992.1 chr17 + 2458 3 full-splice_match TMEM97 ENST00000226230.7 2568 3 107 3 no_subtype FALSE canonical NA NA 309 None 5 25 1 FALSE 0 0 NA A coding 176 528 39 566 PB.2558.2 chr3 + 1453 10 incomplete-splice_match SMC4 ENST00000357388.7 5471 24 346 3672 3prime_fragment FALSE canonical NA NA 1377 None 9 1 0 FALSE 0 0 NA B coding 449 1347 106 1452 PB.10009.1 chr19 + 1452 5 novel_not_in_catalog CCDC97 novel NA NA NA NA no_subtype FALSE canonical NA NA 799 None 5 3 0 TRUE 0 0 NA B coding 374 1122 19 1140 PB.10009.2 chr19 + 2535 6 novel_not_in_catalog CCDC97 novel NA NA NA NA no_subtype TRUE canonical NA NA 934 None 2 7 0 TRUE 0 0 NA B coding 343 1029 24 1052 PB.6602.1 chr11 + 3213 5 genic_intron novelGene_870 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2993 None 2 20 3 FALSE 0 0 NA B non_coding NA NA NA NA PB.6602.3 chr11 + 2521 1 genic_intron novelGene_875 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6602.2 chr11 + 2149 1 genic_intron novelGene_873 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7322.1 chr12 - 1401 6 full-splice_match C12orf43 ENST00000288757.7 4469 6 -4 3072 no_subtype FALSE canonical NA NA 162 None 2 6 0 FALSE 0 0 NA A coding 262 786 18 803 PB.7989.1 chr15 + 2854 11 full-splice_match C15orf41 ENST00000566621.5 2866 11 34 -22 no_subtype FALSE canonical NA NA 932 None 2 13 0 FALSE 0 0 NA A coding 281 843 217 1059 PB.7490.1 chr13 + 2809 16 novel_not_in_catalog SETDB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2695 None 30 6 1 TRUE 0 0 NA C coding 718 2154 654 2807 PB.9497.1 chr18 - 1619 10 full-splice_match PTPN2 ENST00000327283.7 1706 10 77 10 no_subtype FALSE canonical NA NA 189 None 46 1 0 FALSE 0 0 NA C coding 387 1161 121 1281 PB.9497.2 chr18 - 1674 11 novel_in_catalog PTPN2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 145 None 3 2 1 FALSE 0 0 NA C coding 397 1191 77 1267 PB.7490.2 chr13 + 2852 17 novel_not_in_catalog SETDB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2739 None 2 7 2 TRUE 0 0 NA C coding 718 2154 698 2851 PB.10188.1 chr19 + 2738 4 full-splice_match ZNF547 ENST00000282282.3 2739 4 -9 10 no_subtype FALSE canonical NA NA 310 None 2 12 0 FALSE 0 0 NA A coding 402 1206 160 1365 PB.4244.1 chr6 + 2672 5 genic_intron novelGene_1285 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2559 None 2 18 4 FALSE 0 0 NA A non_coding NA NA NA NA PB.6185.1 chr11 - 3308 6 full-splice_match RIC3 ENST00000343202.8 2929 6 28 -407 no_subtype FALSE canonical NA NA 162 None 2 15 0 FALSE 0 0 NA A coding 368 1104 39 1142 PB.5753.2 chr10 + 4184 22 novel_in_catalog BMS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3652 None 7 2 0 FALSE 0 0 NA C coding 1282 3846 35 3880 PB.5753.1 chr10 + 4228 23 full-splice_match BMS1 ENST00000374518.5 7753 23 -15 3540 no_subtype FALSE canonical NA NA 3696 None 3 2 0 FALSE 0 0 NA C coding 1282 3846 79 3924 PB.733.1 chr1 - 2196 6 novel_not_in_catalog RIT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 119 None 16 11 0 FALSE 0 0 NA A coding 219 657 163 819 PB.6751.1 chr11 + 2909 20 novel_not_in_catalog GLB1L2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2752 None 6 9 1 TRUE 0 0 NA B coding 636 1908 99 2006 PB.6751.2 chr11 + 2885 20 novel_not_in_catalog GLB1L2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2731 None 3 16 1 TRUE 0 0 NA B coding 636 1908 69 1976 PB.2761.1 chr4 + 1611 13 full-splice_match LAP3 ENST00000606142.5 1876 13 3 262 no_subtype FALSE canonical NA NA 1338 None 71 1 0 FALSE 0 0 NA A coding 488 1464 62 1525 PB.2867.1 chr4 - 2700 2 genic_intron novelGene_668 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2462 None 3 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9637.20 chr19 + 2204 9 incomplete-splice_match ARHGAP45 ENST00000587602.5 3875 21 1669 2 internal_fragment FALSE canonical NA NA 1237 None 2 17 0 FALSE 0 0 NA C coding 485 1455 127 1581 PB.11083.1 chrX + 2284 2 full-splice_match HNRNPH2 ENST00000316594.5 2223 2 -69 8 no_subtype FALSE canonical NA NA 94 None 5 2 0 FALSE 0 0 NA A coding 449 1347 148 1494 PB.2322.1 chr3 - 3234 15 full-splice_match PROS1 ENST00000394236.7 3560 15 227 99 no_subtype FALSE canonical NA NA 166 None 41 10 0 FALSE 0 0 NA A coding 676 2028 91 2118 PB.7265.1 chr12 + 1160 3 full-splice_match ERP29 ENST00000261735.3 1735 3 116 459 no_subtype FALSE canonical NA NA 317 None 16 2 0 FALSE 0 0 NA A coding 261 783 35 817 PB.130.3 chr1 - 2510 10 novel_in_catalog HNRNPR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 111 None 12 1 0 FALSE 0 0 NA C coding 532 1596 258 1853 PB.7531.13 chr13 - 6570 38 novel_not_in_catalog MYCBP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 15 None 2 0 0 TRUE 0 0 NA B coding 2165 6495 76 6570 PB.8744.1 chr16 - 3673 28 novel_not_in_catalog WDR59 novel NA NA NA NA no_subtype TRUE canonical NA NA 205 None 5 4 0 TRUE 0 0 NA A coding 974 2922 152 3073 PB.8212.2 chr15 + 1532 11 novel_not_in_catalog NEIL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1252 None 6 4 0 TRUE 0 0 NA B coding 390 1170 151 1320 PB.7531.10 chr13 - 2661 1 novel_in_catalog MYCBP2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA B coding 495 1485 1177 2661 PB.3512.6 chr5 + 2705 14 novel_in_catalog MATR3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1641 None 26 3 0 FALSE 0 0 NA C coding 509 1527 163 1689 PB.3512.4 chr5 + 3780 15 full-splice_match MATR3 ENST00000394805.7 4843 15 102 961 no_subtype FALSE canonical NA NA 2726 None 233 5 0 FALSE 0 0 NA C coding 847 2541 234 2774 PB.9232.1 chr17 + 1885 17 novel_not_in_catalog ACSF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1828 None 5 2 0 TRUE 0 0 NA B coding 615 1845 32 1876 PB.2292.1 chr3 - 1922 1 full-splice_match EOGT ENST00000615922.1 1931 1 -4 13 no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A coding 135 405 46 450 PB.4708.12 chr7 + 3564 1 genic_intron novelGene_1186 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A coding 101 303 228 530 PB.9750.1 chr19 + 1866 1 antisense novelGene_DNMT1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A coding 149 447 742 1188 PB.4708.10 chr7 + 3469 2 genic_intron novelGene_1184 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2749 None 2 20 0 FALSE 0 0 NA A coding 9 27 387 413 PB.10240.2 chr20 - 1124 9 full-splice_match DDRGK1 ENST00000354488.7 1306 9 8 174 no_subtype FALSE canonical NA NA 141 None 2 15 0 FALSE 0 0 NA C coding 314 942 51 992 PB.10240.1 chr20 - 1110 10 novel_not_in_catalog DDRGK1 novel NA NA NA NA no_subtype TRUE canonical NA NA 128 None 9 2 0 TRUE 0 0 NA C coding 314 942 38 979 PB.5971.1 chr10 - 3094 4 novel_not_in_catalog NDUFB8 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 112 None 5 27 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.1390.1 chr2 - 3443 1 genic_intron novelGene_642 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3651.1 chr5 + 3002 8 novel_in_catalog CREBRF novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1896 None 2 6 0 FALSE 0 0 NA B coding 631 1893 117 2009 PB.9090.1 chr17 - 2785 1 incomplete-splice_match MED1 ENST00000577831.5 4584 16 1790 10 no_subtype FALSE canonical NA NA NA None 4 1 0 FALSE 0 0 NA A coding 922 2766 20 2785 PB.6870.2 chr12 + 2474 22 novel_in_catalog LRMP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1959 None 9 4 2 FALSE 0 0 NA B coding 499 1497 704 2200 PB.9351.3 chr17 - 1948 8 novel_not_in_catalog NAT9 novel NA NA NA NA no_subtype FALSE canonical NA NA 101 None 5 7 2 FALSE 0 0 NA B coding 206 618 162 779 PB.9351.2 chr17 - 3116 5 novel_not_in_catalog NAT9 novel NA NA NA NA no_subtype FALSE canonical NA NA 532 None 2 22 1 FALSE 0 0 NA B coding 149 447 542 988 PB.7602.7 chr14 - 2943 9 novel_not_in_catalog HNRNPC novel NA NA NA NA no_subtype FALSE canonical NA NA 128 None 6 5 3 FALSE 0 0 NA C coding 171 513 1764 2276 PB.7602.4 chr14 - 2883 8 novel_in_catalog HNRNPC novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 128 None 2 16 1 FALSE 0 0 NA C coding 293 879 165 1043 PB.6986.1 chr12 + 3217 12 incomplete-splice_match TNS2 ENST00000379902.7 4737 29 1520 0 internal_fragment FALSE canonical NA NA 2591 None 4 6 0 FALSE 0 0 NA A coding 904 2712 16 2727 PB.7602.2 chr14 - 1395 9 full-splice_match HNRNPC ENST00000554455.5 1784 9 0 389 no_subtype FALSE canonical NA NA 128 None 36 1 1 FALSE 0 0 NA C coding 306 918 191 1108 PB.1252.1 chr2 - 2216 1 antisense novelGene_LBH_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A coding 109 327 546 872 PB.7602.1 chr14 - 1738 9 novel_not_in_catalog HNRNPC novel NA NA NA NA no_subtype FALSE canonical NA NA 127 None 224 2 1 FALSE 0 0 NA C coding 171 513 560 1072 PB.10916.1 chrX + 1738 8 full-splice_match TSPAN7 ENST00000378482.6 1909 8 174 -3 no_subtype FALSE canonical NA NA 760 None 59 2 0 FALSE 0 0 NA A coding 244 732 19 750 PB.4613.1 chr7 + 2544 14 novel_not_in_catalog ZNF277 novel NA NA NA NA no_subtype TRUE canonical NA NA 1511 None 11 7 0 TRUE 0 0 NA A coding 450 1350 17 1366 PB.6524.2 chr11 - 3382 15 novel_not_in_catalog PGM2L1 novel NA NA NA NA no_subtype TRUE canonical NA NA 417 None 2 10 1 TRUE 0 0 NA C coding 622 1866 307 2172 PB.9601.1 chr18 + 1398 6 full-splice_match TIMM21 ENST00000169551.10 3095 6 24 1673 no_subtype TRUE canonical NA NA 916 None 2 5 0 FALSE 0 0 NA A coding 248 744 275 1018 PB.5951.1 chr10 + 1748 11 full-splice_match ZDHHC16 ENST00000370854.7 1798 11 51 -1 no_subtype FALSE canonical NA NA 1157 None 2 2 0 FALSE 0 0 NA C coding 377 1131 139 1269 PB.3003.1 chr4 - 1368 7 full-splice_match CASP6 ENST00000265164.6 1548 7 36 144 no_subtype FALSE canonical NA NA 82 None 8 5 0 FALSE 0 0 NA A coding 293 879 43 921 PB.3551.1 chr5 - 4317 4 full-splice_match PCDH12 ENST00000231484.3 6562 4 862 1383 no_subtype FALSE canonical NA NA 3229 None 4 5 0 FALSE 0 0 NA A coding 1183 3549 353 3901 PB.1717.1 chr2 + 3086 1 genic_intron novelGene_1335 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10015.1 chr19 + 3776 3 novel_not_in_catalog CEACAM5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2401 None 17 14 1 TRUE 0 0 NA A coding 143 429 108 536 PB.5743.1 chr10 - 2871 21 full-splice_match CUL2 ENST00000374749.7 4208 21 1 1336 no_subtype FALSE canonical NA NA 187 None 14 8 1 FALSE 0 0 NA C coding 745 2235 210 2444 PB.5743.2 chr10 - 2835 21 full-splice_match CUL2 ENST00000374751.7 4233 21 63 1335 no_subtype FALSE canonical NA NA 150 None 14 2 0 FALSE 0 0 NA C coding 745 2235 173 2407 PB.8694.3 chr16 + 2631 8 novel_not_in_catalog PLA2G15 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2275 None 52 10 0 TRUE 0 0 NA B coding 412 1236 54 1289 PB.5272.1 chr9 - 675 4 full-splice_match CCL19 ENST00000311925.6 687 4 1 11 no_subtype FALSE canonical NA NA 186 None 3 2 0 FALSE 0 0 NA A coding 98 294 138 431 PB.6739.3 chr11 + 2841 18 novel_not_in_catalog APLP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2428 None 2 11 1 TRUE 0 0 NA C coding 751 2253 102 2354 PB.486.1 chr1 + 2834 1 genic_intron novelGene_849 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6739.1 chr11 + 3522 16 full-splice_match APLP2 ENST00000528499.5 2530 16 4 -996 no_subtype FALSE canonical NA NA 2066 None 163 11 0 FALSE 0 0 NA C coding 695 2085 81 2165 PB.6739.6 chr11 + 3568 17 novel_in_catalog APLP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2106 None 3 12 0 FALSE 0 0 NA C coding 707 2121 85 2205 PB.6739.7 chr11 + 3534 17 novel_not_in_catalog APLP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2076 None 3 12 1 FALSE 0 0 NA C coding 697 2091 85 2175 PB.2749.1 chr4 - 1680 7 full-splice_match RAB28 ENST00000330852.9 1715 7 29 6 no_subtype FALSE canonical NA NA 261 None 22 4 0 FALSE 0 0 NA A coding 221 663 187 849 PB.9625.1 chr19 - 3735 22 novel_not_in_catalog POLRMT novel NA NA NA NA no_subtype TRUE non_canonical NA NA 103 None 16 5 1 TRUE 0 0 NA A coding 970 2910 777 3686 PB.10931.1 chrX - 2567 15 full-splice_match MAOB ENST00000378069.4 2566 15 -3 2 no_subtype FALSE canonical NA NA 197 None 2 3 0 FALSE 0 0 NA A coding 520 1560 152 1711 PB.9109.2 chr17 + 6378 8 novel_not_in_catalog WIPF2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4153 None 3 26 0 TRUE 0 0 NA B coding 437 1311 258 1568 PB.9997.2 chr19 + 1947 13 novel_in_catalog PLD3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1452 None 3 3 1 FALSE 0 0 NA B coding 490 1470 168 1637 PB.9997.5 chr19 + 2368 14 novel_not_in_catalog PLD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1873 None 2 5 1 FALSE 0 0 NA B coding 490 1470 589 2058 PB.5476.2 chr9 - 4338 15 novel_not_in_catalog PHF19 novel NA NA NA NA no_subtype FALSE canonical NA NA 336 None 2 22 0 FALSE 0 0 NA C coding 580 1740 352 2091 PB.9997.7 chr19 + 1954 12 incomplete-splice_match PLD3 ENST00000409587.5 2180 13 224 2 internal_fragment FALSE canonical NA NA 1458 None 2 2 0 FALSE 0 0 NA B coding 490 1470 174 1643 PB.7159.1 chr12 - 1216 4 full-splice_match UBE2N ENST00000318066.6 5186 4 295 3675 no_subtype FALSE canonical NA NA 113 None 19 4 0 FALSE 0 0 NA C coding 152 456 84 539 PB.9997.8 chr19 + 1928 12 novel_not_in_catalog PLD3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1434 None 2 5 1 TRUE 0 0 NA B coding 490 1470 150 1619 PB.4252.1 chr6 + 3220 3 full-splice_match CCR6 ENST00000400926.5 3216 3 -9 5 no_subtype FALSE canonical NA NA 323 None 29 13 0 FALSE 0 0 NA C coding 374 1122 315 1436 PB.5760.1 chr10 - 3047 2 full-splice_match C10orf25 ENST00000625168.1 3078 2 29 2 no_subtype FALSE canonical NA NA 330 None 6 10 0 FALSE 0 0 NA A coding 109 327 637 963 PB.4607.1 chr7 + 1928 3 full-splice_match DNAJB9 ENST00000249356.3 2715 3 332 455 no_subtype FALSE canonical NA NA 431 None 5 12 0 FALSE 0 0 NA A coding 223 669 215 883 PB.6311.2 chr11 - 1348 5 full-splice_match SPI1 ENST00000227163.8 1168 5 -129 -51 no_subtype FALSE canonical NA NA 212 None 38 1 1 FALSE 0 0 NA A coding 271 813 168 980 PB.151.6 chr1 - 1954 3 full-splice_match RSRP1 ENST00000431849.3 1954 3 -8 8 no_subtype FALSE canonical NA NA 146 None 4 12 0 FALSE 0 0 NA C coding 242 726 213 938 PB.151.1 chr1 - 1414 5 full-splice_match RSRP1 ENST00000243189.11 1502 5 65 23 no_subtype FALSE canonical NA NA 146 None 86 3 0 FALSE 0 0 NA C coding 290 870 213 1082 PB.6311.5 chr11 - 3275 1 novel_in_catalog RP11-750H9.5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 15 0 FALSE 0 0 NA A coding 179 537 734 1270 PB.151.3 chr1 - 2806 5 novel_in_catalog RSRP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 146 None 7 21 0 FALSE 0 0 NA C coding 242 726 213 938 PB.151.2 chr1 - 2967 4 full-splice_match RSRP1 ENST00000498238.1 2941 4 -36 10 no_subtype FALSE canonical NA NA 182 None 148 21 0 FALSE 0 0 NA C coding 242 726 249 974 PB.10268.1 chr20 - 6025 8 full-splice_match TMX4 ENST00000246024.6 6169 8 113 31 no_subtype FALSE canonical NA NA 279 None 2 34 0 FALSE 0 0 NA A coding 349 1047 104 1150 PB.3098.2 chr4 + 1462 4 genic TLR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 425 None 2 4 0 FALSE 0 0 NA B coding 210 630 205 834 PB.7525.1 chr13 - 2787 2 genic_intron novelGene_694 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 19 None 3 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9258.2 chr17 - 1595 1 incomplete-splice_match SRSF1 ENST00000582730.6 3117 3 1381 142 no_subtype FALSE canonical NA NA NA None 4 2 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5959.3 chr10 + 3191 7 full-splice_match R3HCC1L ENST00000314594.6 3198 7 5 2 no_subtype FALSE canonical NA NA 2389 None 10 1 0 FALSE 0 0 NA C coding 778 2334 121 2454 PB.9613.1 chr18 - 2857 1 antisense novelGene_RP11-862L9.3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 20 0 FALSE 0 0 NA A coding 115 345 2513 2857 PB.5959.1 chr10 + 3238 8 novel_in_catalog R3HCC1L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2436 None 7 1 0 FALSE 0 0 NA C coding 778 2334 168 2501 PB.10951.1 chrX + 1384 7 full-splice_match RBM3 ENST00000376759.7 2162 7 -7 785 no_subtype FALSE canonical NA NA 567 None 33 8 1 FALSE 0 0 NA A coding 157 471 71 541 PB.9109.3 chr17 + 5952 9 novel_not_in_catalog WIPF2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3152 None 2 27 0 TRUE 0 0 NA B coding 440 1320 257 1576 PB.6272.1 chr11 + 2563 9 full-splice_match EHF ENST00000257831.7 3150 9 -18 605 no_subtype FALSE canonical NA NA 942 None 3 7 0 FALSE 0 0 NA C coding 300 900 140 1039 PB.6272.2 chr11 + 4404 10 novel_not_in_catalog EHF novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1819 None 3 11 0 TRUE 0 0 NA C coding 300 900 140 1039 PB.6272.3 chr11 + 3263 1 genic EHF novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 12 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2667.2 chr3 + 3862 2 novel_not_in_catalog IL1RAP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1549 None 3 14 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.5675.18 chr10 + 1581 1 genic_intron novelGene_87 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 6 0 FALSE 0 0 NA A coding 53 159 189 347 PB.1763.2 chr2 - 2689 2 antisense novelGene_NABP1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 34 None 5 24 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.8007.1 chr15 + 3433 11 full-splice_match DLL4 ENST00000249749.6 3372 11 -53 -8 no_subtype FALSE canonical NA NA 2381 None 11 0 0 FALSE 0 0 NA A coding 685 2055 330 2384 PB.5780.1 chr10 - 3809 1 genic_intron novelGene_508 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1763.1 chr2 - 2643 1 antisense novelGene_NABP1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3421.1 chr5 - 3445 2 novel_not_in_catalog MCC novel NA NA NA NA no_subtype FALSE canonical NA NA 2288 None 7 39 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.311.2 chr1 + 1829 4 novel_not_in_catalog TMEM125 novel NA NA NA NA no_subtype FALSE canonical NA NA 406 None 2 9 0 FALSE 0 0 NA B coding 219 657 552 1208 PB.311.1 chr1 + 1691 3 incomplete-splice_match TMEM125 ENST00000432792.6 1850 4 144 15 internal_fragment FALSE canonical NA NA 281 None 3 9 2 FALSE 0 0 NA B coding 219 657 427 1083 PB.9414.3 chr17 - 3120 6 novel_not_in_catalog CANT1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 24 None 39 16 2 TRUE 0 0 NA B coding 401 1203 86 1288 PB.2511.4 chr3 + 2690 26 incomplete-splice_match U2SURP ENST00000473835.6 7276 28 71 4515 3prime_fragment FALSE canonical NA NA 2674 None 2 1 0 FALSE 0 0 NA B coding 890 2670 20 2689 PB.1340.8 chr2 - 2605 12 novel_not_in_catalog MTIF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 888 None 2 17 2 FALSE 0 0 NA B coding 500 1500 1105 2604 PB.10891.3 chrX - 2670 17 full-splice_match SH3KBP1 ENST00000379698.8 2678 17 -22 30 no_subtype FALSE canonical NA NA 140 None 71 2 0 FALSE 0 0 NA C coding 628 1884 90 1973 PB.10891.2 chrX - 2527 18 full-splice_match SH3KBP1 ENST00000397821.7 4731 18 97 2107 no_subtype FALSE canonical NA NA 198 None 115 0 0 FALSE 0 0 NA C coding 665 1995 195 2189 PB.10891.1 chrX - 2330 13 full-splice_match SH3KBP1 ENST00000379716.5 3819 13 79 1410 no_subtype FALSE canonical NA NA 58 None 4 5 0 FALSE 0 0 NA C coding 427 1281 47 1327 PB.1340.4 chr2 - 2581 17 novel_not_in_catalog MTIF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 144 None 2 4 1 TRUE 0 0 NA B coding 727 2181 374 2554 PB.1340.3 chr2 - 2834 16 novel_in_catalog MTIF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 413 None 4 7 0 FALSE 0 0 NA B coding 727 2181 626 2806 PB.10891.6 chrX + 3173 1 antisense novelGene_SH3KBP1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10891.5 chrX - 1508 11 incomplete-splice_match SH3KBP1 ENST00000397821.7 4731 18 -100 3323 internal_fragment FALSE canonical NA NA 395 None 4 2 0 FALSE 0 0 NA C coding 372 1116 392 1507 PB.3271.1 chr5 - 2446 14 full-splice_match PLK2 ENST00000274289.7 2960 14 419 95 no_subtype FALSE canonical NA NA 152 None 36 7 0 FALSE 0 0 NA A coding 587 1761 177 1937 PB.6490.4 chr11 - 3237 10 novel_in_catalog KMT5B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 163 None 2 7 1 FALSE 0 0 NA C coding 814 2442 217 2658 PB.6490.5 chr11 - 2670 10 full-splice_match KMT5B ENST00000405515.5 2869 10 192 7 no_subtype FALSE canonical NA NA 160 None 4 7 1 FALSE 0 0 NA C coding 393 1179 237 1415 PB.6490.2 chr11 - 3489 11 novel_in_catalog KMT5B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 179 None 25 4 1 FALSE 0 0 NA C coding 885 2655 256 2910 PB.6490.3 chr11 - 3344 11 novel_not_in_catalog KMT5B novel NA NA NA NA no_subtype FALSE canonical NA NA 102 None 2 4 1 TRUE 0 0 NA C coding 862 2586 179 2764 PB.7905.1 chr14 - 2564 1 genic_intron novelGene_900 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5919.1 chr10 - 3266 26 novel_not_in_catalog IDE novel NA NA NA NA no_subtype TRUE canonical NA NA 130 None 9 2 0 TRUE 0 0 NA A coding 1019 3057 33 3089 PB.10434.16 chr20 - 7232 14 full-splice_match ZNFX1 ENST00000396105.5 7371 14 131 8 no_subtype FALSE canonical NA NA 68 None 16 8 0 FALSE 0 0 NA C coding 1918 5754 117 5870 PB.8459.31 chr16 - 3207 2 novel_not_in_catalog MYH11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 753 None 4 20 0 TRUE 0 0 NA C coding 128 384 2399 2782 PB.1965.1 chr2 + 2760 13 novel_not_in_catalog ATG4B novel NA NA NA NA no_subtype FALSE canonical NA NA 1101 None 32 19 0 TRUE 0 0 NA B coding 319 957 216 1172 PB.1965.4 chr2 + 2969 2 novel_not_in_catalog ATG4B novel NA NA NA NA no_subtype FALSE canonical NA NA 1677 None 7 21 1 TRUE 0 0 NA B coding 125 375 1777 2151 PB.1965.5 chr2 + 1538 13 novel_not_in_catalog ATG4B novel NA NA NA NA no_subtype FALSE canonical NA NA 1101 None 2 0 0 TRUE 0 0 NA B coding 319 957 216 1172 PB.5448.1 chr9 + 1672 4 full-splice_match SLC31A2 ENST00000259392.7 1785 4 98 15 no_subtype FALSE canonical NA NA 298 None 31 6 0 FALSE 0 0 NA A coding 143 429 36 464 PB.4754.1 chr7 - 1276 3 full-splice_match TMUB1 ENST00000297533.8 1353 3 68 9 no_subtype FALSE canonical NA NA 45 None 6 1 0 FALSE 0 0 NA A coding 246 738 76 813 PB.11090.1 chrX + 5309 5 novel_not_in_catalog GPRASP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 436 None 3 8 1 FALSE 0 0 NA A coding 1395 4185 771 4955 PB.9987.2 chr19 + 3559 30 novel_in_catalog SUPT5H novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3150 None 30 2 0 FALSE 0 0 NA C coding 1087 3261 31 3291 PB.9987.3 chr19 + 3579 29 full-splice_match SUPT5H ENST00000598725.5 3742 29 155 8 no_subtype FALSE canonical NA NA 3172 None 59 3 0 FALSE 0 0 NA C coding 1087 3261 53 3313 PB.9987.1 chr19 + 3639 30 full-splice_match SUPT5H ENST00000432763.6 3710 30 69 2 no_subtype TRUE canonical NA NA 3230 None 118 1 0 FALSE 0 0 NA C coding 1087 3261 111 3371 PB.1804.1 chr2 + 3265 14 novel_not_in_catalog BMPR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2954 None 12 4 0 TRUE 0 0 NA B coding 1038 3114 89 3202 PB.1690.2 chr2 + 2854 1 genic_intron novelGene_1304 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5329.1 chr9 + 3267 21 full-splice_match PCSK5 ENST00000376752.8 5756 21 6 2483 no_subtype FALSE canonical NA NA 3097 None 4 2 1 FALSE 0 0 NA A coding 913 2739 472 3210 PB.8292.1 chr15 - 1721 1 antisense novelGene_NGRN_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6684.1 chr11 - 3223 8 novel_in_catalog SLC37A4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1530 None 9 12 0 FALSE 0 0 NA B coding 228 684 1987 2670 PB.5340.2 chr9 - 1609 2 genic_intron novelGene_757 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 105 None 3 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8023.2 chr15 - 2897 21 novel_not_in_catalog TMEM87A novel NA NA NA NA no_subtype FALSE canonical NA NA 208 None 63 5 0 TRUE 0 0 NA B coding 555 1665 65 1729 PB.8023.3 chr15 - 2836 20 novel_not_in_catalog TMEM87A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 203 None 2 15 2 TRUE 0 0 NA B coding 491 1473 192 1664 PB.8023.1 chr15 - 2856 21 novel_not_in_catalog TMEM87A novel NA NA NA NA no_subtype FALSE canonical NA NA 161 None 17 5 0 TRUE 0 0 NA B coding 556 1668 18 1685 PB.1829.1 chr2 + 3414 2 genic_intron novelGene_1393 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1642 None 2 15 1 FALSE 0 0 NA A coding 120 360 295 654 PB.8023.4 chr15 - 3165 2 novel_not_in_catalog TMEM87A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 28 None 3 27 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.569.1 chr1 + 2819 11 full-splice_match DDX20 ENST00000369702.4 4212 11 620 773 no_subtype FALSE canonical NA NA 1312 None 26 3 0 FALSE 0 0 NA A coding 824 2472 1 2472 PB.1862.1 chr2 - 1928 2 genic RP11-548H3.1 novel NA NA NA NA no_subtype FALSE canonical NA NA 218 None 2 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9125.2 chr17 + 3222 3 novel_in_catalog CNP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1525 None 3 14 0 FALSE 0 0 NA C coding 401 1203 770 1972 PB.9125.3 chr17 + 1169 1 incomplete-splice_match CNP ENST00000393888.1 2583 4 1410 5 no_subtype FALSE canonical NA NA NA None 3 1 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9125.1 chr17 + 2604 4 full-splice_match CNP ENST00000393892.7 5217 4 54 2559 no_subtype FALSE canonical NA NA 906 None 173 4 0 FALSE 0 0 NA C coding 421 1263 91 1353 PB.7220.1 chr12 - 3012 1 genic_intron novelGene_964 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A coding 102 306 432 737 PB.10703.3 chr22 - 1931 2 full-splice_match DUSP18 ENST00000334679.3 2479 2 30 518 no_subtype FALSE canonical NA NA 399 None 89 11 0 FALSE 0 0 NA C coding 188 564 477 1040 PB.1373.2 chr2 - 3709 7 full-splice_match PELI1 ENST00000358912.4 3750 7 34 7 no_subtype FALSE canonical NA NA 340 None 2 9 0 FALSE 0 0 NA C coding 418 1254 410 1663 PB.10703.7 chr22 - 2981 3 novel_not_in_catalog DUSP18 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 422 None 3 20 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.7608.52 chr14 + 1631 5 novel_not_in_catalog TRDC novel NA NA NA NA no_subtype FALSE canonical NA NA 587 None 4 2 0 FALSE 0 0 NA B coding 173 519 65 583 PB.7608.53 chr14 + 3542 1 full-splice_match TRAJ40,TRAJ39 ENST00000390498.1 63 1 -1931 -1548 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7608.50 chr14 + 1805 5 novel_not_in_catalog TRDC novel NA NA NA NA no_subtype FALSE canonical NA NA 763 None 7 3 0 FALSE 0 0 NA B coding 140 420 340 759 PB.7608.51 chr14 + 1551 5 novel_not_in_catalog TRDC novel NA NA NA NA no_subtype FALSE canonical NA NA 508 None 4 1 0 FALSE 0 0 NA B coding 140 420 85 504 PB.10007.2 chr19 + 2755 15 full-splice_match HNRNPUL1 ENST00000595018.5 2794 15 36 3 no_subtype FALSE canonical NA NA 2187 None 3 1 0 FALSE 0 0 NA C coding 756 2268 34 2301 PB.10007.3 chr19 + 2983 15 full-splice_match HNRNPUL1 ENST00000595196.5 3043 15 26 34 no_subtype FALSE canonical NA NA 2415 None 12 0 0 FALSE 0 0 NA C coding 716 2148 382 2529 PB.7608.54 chr14 + 3081 1 full-splice_match TRAJ32,TRAJ33 ENST00000390505.1 66 1 -1579 -1436 no_subtype FALSE canonical NA NA NA None 10 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10007.1 chr19 + 2819 15 full-splice_match HNRNPUL1 ENST00000352456.7 3426 15 22 585 no_subtype FALSE canonical NA NA 2254 None 2 0 0 FALSE 0 0 NA C coding 766 2298 71 2368 PB.616.1 chr1 - 1807 5 full-splice_match SEC22B ENST00000578049.3 6922 5 -6 5121 no_subtype FALSE canonical NA NA 215 None 26 7 0 FALSE 0 0 NA C coding 215 645 141 785 PB.3734.1 chr6 - 2809 2 antisense novelGene_PAK1IP1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1180 None 4 22 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5674.1 chr10 - 3297 3 novel_not_in_catalog RP11-397O4.1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1581 None 2 9 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.616.2 chr1 - 1496 1 incomplete-splice_match SEC22B ENST00000578049.3 6922 5 1109 4318 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4234.2 chr6 + 1684 6 full-splice_match WTAP ENST00000337387.4 1622 6 -63 1 no_subtype FALSE canonical NA NA 460 None 5 3 0 FALSE 0 0 NA C coding 151 453 188 640 PB.9139.9 chr17 + 3089 9 novel_not_in_catalog COASY novel NA NA NA NA no_subtype FALSE canonical NA NA 2722 None 5 5 0 TRUE 0 0 NA B coding 269 807 1976 2782 PB.10186.1 chr19 + 3013 2 novel_not_in_catalog CTC-444N24.11 novel NA NA NA NA no_subtype FALSE canonical NA NA 2765 None 13 33 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.9139.5 chr17 + 3953 20 novel_not_in_catalog ATP6V0A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2408 None 2 12 0 FALSE 0 0 NA C coding 820 2460 40 2499 PB.10374.2 chr20 + 2946 3 novel_not_in_catalog RALGAPB novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1174 None 2 12 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.10374.1 chr20 + 5575 30 novel_in_catalog RALGAPB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4547 None 2 4 0 FALSE 0 0 NA B coding 1495 4485 254 4738 PB.9139.1 chr17 + 1399 5 full-splice_match ATP6V0A1 ENST00000588629.1 1797 5 76 322 no_subtype FALSE canonical NA NA 371 None 9 2 0 FALSE 0 0 NA C coding 166 498 78 575 PB.8628.11 chr16 + 5578 8 novel_not_in_catalog NLRC5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5309 None 3 16 0 TRUE 0 0 NA B coding 720 2160 129 2288 PB.9139.3 chr17 + 4012 21 novel_not_in_catalog ATP6V0A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2472 None 39 11 1 FALSE 0 0 NA C coding 832 2496 68 2563 PB.9139.2 chr17 + 4059 21 full-splice_match ATP6V0A1 ENST00000264649.10 4110 21 40 11 no_subtype FALSE canonical NA NA 2514 None 16 10 0 FALSE 0 0 NA C coding 838 2514 92 2605 PB.1322.6 chr2 + 5590 2 novel_not_in_catalog TTC7A novel NA NA NA NA no_subtype FALSE canonical NA NA 605 None 7 18 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.1322.5 chr2 + 5771 2 genic_intron novelGene_465 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2954 None 3 29 1 FALSE 0 0 NA A coding 225 675 2736 3410 PB.1322.3 chr2 + 3428 15 incomplete-splice_match TTC7A ENST00000491786.5 3615 16 183 4 internal_fragment FALSE canonical NA NA 1576 None 3 15 0 FALSE 0 0 NA B coding 598 1794 2 1795 PB.1322.2 chr2 + 5679 3 genic_intron novelGene_464 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4614 None 3 49 2 FALSE 0 0 NA A coding 109 327 1894 2220 PB.9109.8 chr17 + 7010 1 novel_in_catalog RARA novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 48 0 FALSE 0 0 NA C coding 103 309 4111 4419 PB.915.1 chr1 + 1902 5 full-splice_match TSEN15 ENST00000361641.5 1960 5 53 5 no_subtype FALSE canonical NA NA 521 None 6 5 0 FALSE 0 0 NA A coding 171 513 27 539 PB.7922.3 chr14 - 1713 11 full-splice_match WARS ENST00000392882.6 2938 11 299 926 no_subtype FALSE canonical NA NA 63 None 266 4 1 FALSE 0 0 NA C coding 471 1413 137 1549 PB.2402.2 chr3 + 2944 3 full-splice_match ADPRH ENST00000471850.1 1499 3 281 -1726 no_subtype FALSE canonical NA NA 468 None 4 13 1 FALSE 0 0 NA C coding 250 750 131 880 PB.7430.1 chr13 + 3356 1 genic PDS5B novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 20 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7922.7 chr14 - 2618 12 novel_not_in_catalog WARS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 40 None 2 11 2 TRUE 0 0 NA C coding 471 1413 120 1532 PB.7922.4 chr14 - 2598 11 novel_not_in_catalog WARS novel NA NA NA NA no_subtype FALSE canonical NA NA 63 None 2 6 0 FALSE 0 0 NA C coding 471 1413 100 1512 PB.2855.3 chr4 + 3790 25 full-splice_match POLR2B ENST00000314595.5 3748 25 -56 14 no_subtype FALSE canonical NA NA 3534 None 71 5 0 FALSE 0 0 NA C coding 1174 3522 100 3621 PB.8381.1 chr16 + 1582 9 full-splice_match MLST8 ENST00000569417.5 1870 9 270 18 no_subtype FALSE canonical NA NA 946 None 9 10 0 FALSE 0 0 NA C coding 326 978 85 1062 PB.2855.1 chr4 + 3203 8 novel_not_in_catalog POLR2B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2944 None 7 19 0 TRUE 0 0 NA C coding 221 663 2369 3031 PB.1781.1 chr2 + 2975 2 genic MARS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2723 None 17 9 0 FALSE 0 0 NA C coding 593 1779 5 1783 PB.2855.6 chr4 + 2894 6 novel_in_catalog POLR2B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2633 None 6 16 0 FALSE 0 0 NA C coding 221 663 2058 2720 PB.2855.5 chr4 + 3452 22 novel_in_catalog POLR2B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3193 None 2 3 0 FALSE 0 0 NA C coding 1067 3201 80 3280 PB.7370.1 chr12 + 2916 5 novel_not_in_catalog PUS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2600 None 6 13 0 TRUE 0 0 NA B coding 374 1122 1524 2645 PB.7370.2 chr12 + 1511 6 novel_not_in_catalog PUS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1199 None 4 1 0 FALSE 0 0 NA B coding 399 1197 48 1244 PB.2511.1 chr3 + 4301 28 novel_in_catalog U2SURP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2968 None 20 10 0 FALSE 0 0 NA B coding 1028 3084 21 3104 PB.9653.2 chr19 - 1213 6 full-splice_match PLEKHJ1 ENST00000326631.6 1206 6 -10 3 no_subtype FALSE canonical NA NA 176 None 9 11 0 FALSE 0 0 NA A coding 149 447 83 529 PB.56.1 chr1 + 3302 3 novel_not_in_catalog UBIAD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2834 None 15 12 1 TRUE 0 0 NA C coding 338 1014 306 1319 PB.56.2 chr1 + 2804 2 full-splice_match UBIAD1 ENST00000376810.5 3646 2 21 821 no_subtype FALSE canonical NA NA 834 None 9 9 0 FALSE 0 0 NA C coding 338 1014 306 1319 PB.56.3 chr1 + 2779 4 novel_not_in_catalog UBIAD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2309 None 3 11 1 TRUE 0 0 NA C coding 139 417 378 794 PB.10462.1 chr20 + 1807 7 full-splice_match RAB22A ENST00000244040.3 8670 7 19 6844 no_subtype FALSE canonical NA NA 749 None 5 2 0 FALSE 0 0 NA A coding 194 582 263 844 PB.3963.1 chr6 - 3113 18 novel_not_in_catalog MCM3 novel NA NA NA NA no_subtype TRUE canonical NA NA 202 None 126 9 0 TRUE 0 0 NA A coding 808 2424 125 2548 PB.5832.3 chr10 - 2741 14 novel_not_in_catalog PSAP novel NA NA NA NA no_subtype FALSE canonical NA NA 70 None 3027 4 0 FALSE 0 0 NA B coding 523 1569 31 1599 PB.902.1 chr1 + 1867 6 full-splice_match MR1 ENST00000367580.5 7704 6 -24 5861 no_subtype FALSE canonical NA NA 1014 None 5 5 0 FALSE 0 0 NA A coding 341 1023 30 1052 PB.5832.7 chr10 - 1146 1 incomplete-splice_match PSAP ENST00000610929.3 1969 9 821 3 no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5832.6 chr10 - 2669 14 novel_not_in_catalog PSAP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 120 None 4 8 2 TRUE 0 0 NA B coding 269 807 81 887 PB.5494.1 chr9 - 3704 1 genic_intron novelGene_1078 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5112.1 chr8 - 1645 1 incomplete-splice_match MTSS1 ENST00000378017.7 4458 14 2813 1 no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2849.4 chr4 + 3494 19 full-splice_match EXOC1 ENST00000381295.6 3551 19 49 8 no_subtype FALSE canonical NA NA 2831 None 2 7 0 FALSE 0 0 NA C coding 894 2682 300 2981 PB.466.3 chr1 + 5472 21 full-splice_match PKN2 ENST00000370513.9 2890 21 -299 -2283 no_subtype FALSE canonical NA NA 2914 None 3 29 0 FALSE 0 0 NA C coding 936 2808 308 3115 PB.466.1 chr1 + 1601 3 novel_in_catalog PKN2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 656 None 5 10 0 FALSE 0 0 NA C coding 186 558 308 865 PB.10523.1 chr21 - 3701 13 novel_not_in_catalog TIAM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 43 None 2 15 0 TRUE 0 0 NA B coding 581 1743 8 1750 PB.8516.1 chr16 - 3139 1 antisense novelGene_IL4R_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 9 0 FALSE 0 0 NA A coding 102 306 2145 2450 PB.2849.2 chr4 + 3264 18 full-splice_match EXOC1 ENST00000349598.6 3248 18 -39 23 no_subtype FALSE canonical NA NA 2595 None 14 7 1 FALSE 0 0 NA C coding 879 2637 109 2745 PB.10523.2 chr21 - 4199 15 novel_in_catalog TIAM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 148 None 2 17 0 FALSE 0 0 NA B coding 682 2046 214 2259 PB.7897.1 chr14 - 3614 6 antisense novelGene_RP11-404P21.8_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 247 None 2 26 1 FALSE 0 0 NA A coding 105 315 2498 2812 PB.8110.1 chr15 - 2689 2 antisense novelGene_CGNL1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2562 None 2 18 1 FALSE 0 0 NA A coding 159 477 1620 2096 PB.7165.1 chr12 - 3000 17 novel_not_in_catalog CEP83 novel NA NA NA NA no_subtype FALSE canonical NA NA 279 None 2 11 1 TRUE 0 0 NA A coding 693 2079 405 2483 PB.1602.1 chr2 + 3372 9 full-splice_match CCNT2 ENST00000264157.9 6917 9 14 3531 no_subtype FALSE canonical NA NA 790 None 4 9 0 FALSE 0 0 NA A coding 730 2190 17 2206 PB.2606.1 chr3 + 1794 14 full-splice_match ACTL6A ENST00000429709.6 1901 14 97 10 no_subtype FALSE canonical NA NA 1325 None 20 3 0 FALSE 0 0 NA A coding 429 1287 117 1403 PB.11094.2 chrX - 1812 4 full-splice_match MORF4L2 ENST00000498064.1 451 4 111 -1472 no_subtype FALSE canonical NA NA 75 None 37 3 0 FALSE 0 0 NA C coding 288 864 292 1155 PB.5649.3 chr10 - 5662 6 novel_not_in_catalog LARP4B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1111 None 2 37 4 TRUE 0 0 NA B coding 104 312 4982 5293 PB.6703.4 chr11 + 6777 52 novel_not_in_catalog SORL1 novel NA NA NA NA no_subtype TRUE canonical NA NA 6588 None 91 0 0 TRUE 0 0 NA B coding 2214 6642 12 6653 PB.5649.1 chr10 - 3047 6 incomplete-splice_match LARP4B ENST00000316157.7 5642 17 1333 1262 5prime_fragment FALSE canonical NA NA 192 None 2 13 0 FALSE 0 0 NA B coding 17 51 872 922 PB.4163.2 chr6 + 1890 9 novel_not_in_catalog VTA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1608 None 3 3 1 TRUE 0 0 NA C coding 307 921 26 946 PB.7666.4 chr14 - 1426 5 novel_in_catalog NFKBIA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 332 None 2 2 0 FALSE 0 0 NA C coding 122 366 106 471 PB.1209.1 chr2 + 2734 1 incomplete-splice_match GDF7 ENST00000272224.4 9749 2 7007 9 no_subtype FALSE canonical NA NA NA None 5 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7666.1 chr14 - 1119 6 full-splice_match NFKBIA ENST00000216797.9 1558 6 -3 442 no_subtype FALSE canonical NA NA 332 None 120 2 0 FALSE 0 0 NA C coding 317 951 106 1056 PB.7666.2 chr14 - 1411 5 novel_in_catalog NFKBIA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 332 None 2 2 0 FALSE 0 0 NA C coding 197 591 106 696 PB.10458.1 chr20 + 1646 14 novel_not_in_catalog RAE1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1204 None 30 2 0 TRUE 0 0 NA A coding 368 1104 185 1288 PB.2757.2 chr4 - 4256 25 novel_in_catalog PROM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 408 None 2 15 1 FALSE 0 0 NA B coding 825 2475 621 3095 PB.2757.3 chr4 - 3904 25 novel_in_catalog PROM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 59 None 12 17 1 FALSE 0 0 NA B coding 825 2475 272 2746 PB.2025.1 chr3 - 812 4 full-splice_match MRPS25 ENST00000253686.6 4586 4 79 3695 no_subtype FALSE canonical NA NA 196 None 3 5 0 FALSE 0 0 NA A coding 173 519 63 581 PB.9611.2 chr18 + 5545 23 incomplete-splice_match ZNF236 ENST00000320610.13 7124 31 1254 325 internal_fragment FALSE canonical NA NA 4166 None 2 17 2 FALSE 0 0 NA B coding 1385 4155 134 4288 PB.2757.4 chr4 - 4104 26 novel_in_catalog PROM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 248 None 15 18 1 FALSE 0 0 NA B coding 833 2499 461 2959 PB.2238.3 chr3 + 5094 22 novel_not_in_catalog NISCH novel NA NA NA NA no_subtype FALSE canonical NA NA 3901 None 3 12 0 TRUE 0 0 NA B coding 1251 3753 757 4509 PB.230.1 chr1 - 1540 2 full-splice_match MARCKSL1 ENST00000329421.7 1699 2 149 10 no_subtype FALSE canonical NA NA 284 None 59 5 0 FALSE 0 0 NA A coding 195 585 198 782 PB.11187.1 chrX + 3108 1 genic_intron novelGene_1242 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A coding 100 300 2095 2394 PB.861.1 chr1 + 3100 10 novel_not_in_catalog FMO3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1458 None 2 18 1 FALSE 0 0 NA C coding 532 1596 203 1798 PB.6000.1 chr10 - 1766 2 antisense novelGene_WBP1L_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 19 None 2 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10876.1 chrX + 2662 15 full-splice_match MOSPD2 ENST00000380492.7 4163 15 42 1459 no_subtype FALSE canonical NA NA 1465 None 29 2 0 FALSE 0 0 NA A coding 518 1554 47 1600 PB.5333.1 chr9 + 2921 1 genic_intron novelGene_723 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.840.1 chr1 - 1660 8 novel_not_in_catalog CD247 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 189 None 89 6 0 FALSE 0 0 NA B coding 165 495 132 626 PB.323.1 chr1 + 3174 20 full-splice_match IPO13 ENST00000372343.7 3894 20 449 271 no_subtype FALSE canonical NA NA 3008 None 21 6 1 FALSE 0 0 NA A coding 963 2889 214 3102 PB.8365.1 chr16 + 3096 21 novel_not_in_catalog TELO2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2478 None 29 13 1 TRUE 0 0 NA A coding 837 2511 72 2582 PB.7358.1 chr12 + 2875 18 full-splice_match TCTN2 ENST00000303372.6 2912 18 16 21 no_subtype FALSE canonical NA NA 2096 None 4 9 1 FALSE 0 0 NA A coding 697 2091 113 2203 PB.2841.1 chr4 - 3462 5 novel_not_in_catalog LRRC66 novel NA NA NA NA no_subtype FALSE canonical NA NA 54 None 2 5 0 TRUE 0 0 NA A coding 880 2640 60 2699 PB.210.3 chr1 - 3617 2 novel_not_in_catalog SRSF4 novel NA NA NA NA no_subtype FALSE canonical NA NA 3184 None 4 23 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.210.2 chr1 - 2185 6 full-splice_match SRSF4 ENST00000373795.6 2387 6 89 113 no_subtype FALSE canonical NA NA 253 None 2 5 0 FALSE 0 0 NA C coding 494 1482 147 1628 PB.746.1 chr1 - 1929 15 novel_not_in_catalog CCT3 novel NA NA NA NA no_subtype FALSE canonical NA NA 94 None 127 1 0 FALSE 0 0 NA B coding 545 1635 64 1698 PB.1314.1 chr2 + 1502 1 genic_intron novelGene_453 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4700.1 chr7 + 2759 3 full-splice_match TMEM213 ENST00000442682.6 4167 3 42 1366 no_subtype FALSE canonical NA NA 265 None 3 12 0 FALSE 0 0 NA A coding 107 321 112 432 PB.5137.9 chr8 - 2628 8 novel_not_in_catalog ST3GAL1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 115 None 2 2 0 FALSE 0 0 NA C coding 340 1020 747 1766 PB.746.4 chr1 - 1906 15 novel_not_in_catalog CCT3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 94 None 2 8 2 TRUE 0 0 NA B coding 466 1398 282 1679 PB.5137.7 chr8 - 2838 10 full-splice_match ST3GAL1 ENST00000522652.5 2580 10 -218 -40 no_subtype FALSE canonical NA NA 375 None 10 3 0 FALSE 0 0 NA C coding 340 1020 957 1976 PB.5220.1 chr9 + 4339 25 novel_not_in_catalog KDM4C novel NA NA NA NA no_subtype TRUE canonical NA NA 3246 None 2 5 0 TRUE 0 0 NA C coding 1056 3168 253 3420 PB.5220.2 chr9 + 3614 8 full-splice_match KDM4C ENST00000489243.5 1439 8 -75 -2100 no_subtype FALSE canonical NA NA 976 None 2 17 0 FALSE 0 0 NA C coding 368 1104 194 1297 PB.5220.3 chr9 + 4364 25 novel_not_in_catalog KDM4C novel NA NA NA NA no_subtype FALSE canonical NA NA 3270 None 2 9 1 TRUE 0 0 NA C coding 1089 3267 178 3444 PB.5220.4 chr9 + 4335 28 novel_not_in_catalog KDM4C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3241 None 2 15 2 TRUE 0 0 NA C coding 1056 3168 248 3415 PB.5220.5 chr9 + 3752 22 novel_not_in_catalog KDM4C novel NA NA NA NA no_subtype FALSE canonical NA NA 2639 None 2 6 0 TRUE 0 0 NA C coding 954 2862 12 2873 PB.5641.1 chr9 - 1671 7 incomplete-splice_match NSMF ENST00000371482.5 2888 9 1209 8 5prime_fragment FALSE canonical NA NA 48 None 2 10 0 FALSE 0 0 NA A coding 124 372 136 507 PB.8579.1 chr16 + 1550 6 novel_in_catalog ITGAD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 485 None 3 7 0 FALSE 0 0 NA C coding 219 657 59 715 PB.8752.2 chr16 + 2113 3 full-splice_match TERF2IP ENST00000300086.4 2118 3 6 -1 no_subtype FALSE canonical NA NA 886 None 11 6 0 FALSE 0 0 NA C coding 395 1185 104 1288 PB.6737.1 chr11 - 6209 10 novel_not_in_catalog ARHGAP32 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 47 None 3 13 0 TRUE 0 0 NA A coding 844 2532 147 2678 PB.5113.1 chr8 + 2854 11 full-splice_match SQLE ENST00000265896.9 2961 11 101 6 no_subtype FALSE canonical NA NA 2329 None 95 10 0 FALSE 0 0 NA C coding 574 1722 798 2519 PB.5113.2 chr8 + 3031 6 novel_in_catalog SQLE novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1831 None 2 18 0 FALSE 0 0 NA C coding 372 1116 896 2011 PB.8178.1 chr15 - 1436 1 genic_intron novelGene_634 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4479.2 chr7 - 3196 2 antisense novelGene_RSBN1L_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 28 None 3 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9834.1 chr19 - 1497 2 novel_not_in_catalog BRD4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 518 None 3 9 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.1368.1 chr2 + 2951 7 novel_not_in_catalog EHBP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1349 None 4 16 2 TRUE 0 0 NA A coding 106 318 317 634 PB.3315.1 chr5 + 1605 1 incomplete-splice_match MAP1B ENST00000296755.11 12036 7 10428 4 no_subtype FALSE canonical NA NA NA None 5 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.761.1 chr1 - 2582 12 full-splice_match FCRL2 ENST00000361516.7 2579 12 -10 7 no_subtype FALSE canonical NA NA 90 None 2 2 0 FALSE 0 0 NA A coding 508 1524 60 1583 PB.3610.1 chr5 + 3193 1 full-splice_match PPP1R2P3 ENST00000522232.2 1991 1 -92 -1110 no_subtype FALSE canonical NA NA NA None 52 30 0 FALSE 0 0 NA A coding 205 615 118 732 PB.10618.4 chr22 + 3047 6 novel_not_in_catalog BCL2L13 novel NA NA NA NA no_subtype FALSE canonical NA NA 2828 None 2 23 2 TRUE 0 0 NA B coding 205 615 804 1418 PB.9286.1 chr17 - 2907 7 novel_not_in_catalog CYB561 novel NA NA NA NA no_subtype FALSE canonical NA NA 61 None 4 18 2 TRUE 0 0 NA A coding 251 753 75 827 PB.7771.3 chr14 + 2845 2 genic_intron novelGene_636 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1374 None 4 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.736.1 chr1 - 4180 22 full-splice_match ARHGEF2 ENST00000361247.8 4149 22 -35 4 no_subtype FALSE canonical NA NA 198 None 43 9 0 FALSE 0 0 NA C coding 986 2958 136 3093 PB.2909.1 chr4 - 1549 8 full-splice_match HNRNPD ENST00000353341.8 1585 8 27 9 no_subtype FALSE canonical NA NA 514 None 9 0 0 FALSE 0 0 NA C coding 306 918 282 1199 PB.10618.1 chr22 + 3040 6 novel_not_in_catalog BCL2L13 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2839 None 2 14 1 TRUE 0 0 NA B coding 323 969 461 1429 PB.10618.2 chr22 + 3112 7 novel_not_in_catalog BCL2L13 novel NA NA NA NA no_subtype FALSE canonical NA NA 2894 None 2 16 1 TRUE 0 0 NA B coding 323 969 516 1484 PB.10618.3 chr22 + 3180 8 novel_not_in_catalog BCL2L13 novel NA NA NA NA no_subtype FALSE canonical NA NA 2990 None 29 14 2 TRUE 0 0 NA B coding 485 1455 126 1580 PB.2667.8 chr3 + 3264 2 incomplete-splice_match IL1RAP ENST00000342550.6 4490 10 1219 7 internal_fragment FALSE canonical NA NA 96 None 2 16 0 FALSE 0 0 NA B coding 81 243 219 461 PB.4022.3 chr6 - 3227 11 full-splice_match SYNCRIP ENST00000616122.4 6764 11 -2 3539 no_subtype FALSE canonical NA NA 128 None 2 1 0 FALSE 0 0 NA C coding 464 1392 275 1666 PB.4708.9 chr7 + 3638 1 genic_intron novelGene_1183 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1275.8 chr2 - 2701 17 novel_not_in_catalog EIF2AK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 90 None 12 15 2 TRUE 0 0 NA B coding 262 786 274 1059 PB.4022.2 chr6 - 1480 1 incomplete-splice_match SYNCRIP ENST00000355238.10 6449 12 1975 2995 no_subtype FALSE canonical NA NA NA None 2 1 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.218.3 chr1 + 2176 12 full-splice_match TINAGL1 ENST00000271064.11 2187 12 5 6 no_subtype FALSE canonical NA NA 1334 None 3 9 0 FALSE 0 0 NA C coding 467 1401 72 1472 PB.1275.7 chr2 - 2718 18 novel_not_in_catalog EIF2AK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 16 None 4 15 1 TRUE 0 0 NA B coding 262 786 291 1076 PB.218.1 chr1 + 1763 10 novel_in_catalog TINAGL1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 923 None 2 5 0 FALSE 0 0 NA C coding 290 870 192 1061 PB.1275.5 chr2 - 4329 17 novel_not_in_catalog EIF2AK2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 23 None 2 20 1 TRUE 0 0 NA B coding 262 786 123 908 PB.8545.3 chr16 + 1861 6 novel_not_in_catalog TMEM219 novel NA NA NA NA no_subtype FALSE canonical NA NA 1768 None 5 1 0 FALSE 0 0 NA B coding 240 720 1013 1732 PB.8545.2 chr16 + 1633 1 novel_in_catalog TMEM219 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 7 4 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8545.1 chr16 + 898 7 novel_not_in_catalog TMEM219 novel NA NA NA NA no_subtype FALSE canonical NA NA 824 None 5 0 0 FALSE 0 0 NA B coding 240 720 69 788 PB.10493.2 chr20 + 3295 6 novel_not_in_catalog PCMTD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1626 None 4 22 1 TRUE 0 0 NA B coding 185 555 320 874 PB.4015.1 chr6 - 2044 13 full-splice_match PGM3 ENST00000513973.5 6107 13 22 4041 no_subtype FALSE canonical NA NA 93 None 3 2 0 FALSE 0 0 NA C coding 542 1626 96 1721 PB.3309.5 chr5 - 2848 1 novel_in_catalog NAIP novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9558.1 chr18 - 1450 3 full-splice_match IER3IP1 ENST00000256433.4 3525 3 24 2051 no_subtype FALSE canonical NA NA 164 None 6 9 0 FALSE 0 0 NA C coding 82 246 74 319 PB.3309.1 chr5 - 5733 15 full-splice_match NAIP ENST00000194097.8 6088 15 191 164 no_subtype FALSE canonical NA NA 61 None 9 8 0 FALSE 0 0 NA C coding 1403 4209 65 4273 PB.3309.2 chr5 - 5640 14 novel_in_catalog NAIP novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 61 None 3 7 0 FALSE 0 0 NA C coding 1015 3045 1147 4191 PB.10804.1 chr22 - 2120 1 genic POLDIP3 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10313.2 chr20 + 2868 19 novel_not_in_catalog TPX2 novel NA NA NA NA no_subtype TRUE canonical NA NA 2346 None 8 8 0 TRUE 0 0 NA B coding 747 2241 214 2454 PB.6949.1 chr12 + 1552 4 full-splice_match TUBA1C ENST00000301072.10 3001 4 175 1274 no_subtype FALSE canonical NA NA 475 None 44 10 0 FALSE 0 0 NA A coding 449 1347 101 1447 PB.10804.2 chr22 - 1495 9 full-splice_match POLDIP3 ENST00000252115.9 3441 9 27 1919 no_subtype FALSE canonical NA NA 137 None 123 1 0 FALSE 0 0 NA C coding 421 1263 79 1341 PB.10313.3 chr20 + 3030 16 novel_in_catalog TPX2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2205 None 2 7 0 FALSE 0 0 NA B coding 747 2241 73 2313 PB.10081.1 chr19 + 2596 7 novel_in_catalog DHX34 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1908 None 2 2 0 FALSE 0 0 NA B coding 596 1788 316 2103 PB.10081.2 chr19 + 3888 18 novel_not_in_catalog DHX34 novel NA NA NA NA no_subtype TRUE canonical NA NA 3593 None 4 5 0 TRUE 0 0 NA B coding 1143 3429 296 3724 PB.4767.2 chr7 + 2883 6 novel_in_catalog INSIG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 896 None 4 11 0 FALSE 0 0 NA C coding 277 831 93 923 PB.8848.2 chr17 - 1611 4 novel_not_in_catalog TAX1BP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 91 None 2 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8848.1 chr17 - 1301 4 full-splice_match TAX1BP3 ENST00000225525.3 1377 4 76 0 no_subtype FALSE canonical NA NA 119 None 10 7 0 FALSE 0 0 NA C coding 124 372 81 452 PB.1336.1 chr2 + 6350 28 novel_not_in_catalog SPTBN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 6324 None 6 15 2 FALSE 0 0 NA A coding 1751 5253 399 5651 PB.5208.2 chr9 + 2781 2 genic PLPP6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1515 None 2 12 0 FALSE 0 0 NA C coding 295 885 66 950 PB.10645.1 chr22 - 2522 8 novel_not_in_catalog KLHL22 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 42 None 6 5 2 TRUE 0 0 NA B coding 634 1902 79 1980 PB.9451.4 chr17 + 5475 7 novel_not_in_catalog SLC16A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5330 None 6 44 2 TRUE 0 0 NA B coding 465 1395 3598 4992 PB.7214.1 chr12 - 1723 1 intergenic novelGene_958 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3417.2 chr5 + 2724 6 novel_not_in_catalog SRP19 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2222 None 2 23 2 TRUE 0 0 NA A coding 111 333 2021 2353 PB.3417.1 chr5 + 1863 6 novel_not_in_catalog CTC-487M23.8 novel NA NA NA NA no_subtype FALSE canonical NA NA 446 None 3 9 1 TRUE 0 0 NA A coding 467 1401 447 1847 PB.5078.1 chr8 + 1617 1 genic_intron novelGene_1039 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4475.2 chr7 - 2984 31 full-splice_match GSAP ENST00000257626.11 3251 31 29 238 no_subtype FALSE canonical NA NA 159 None 14 6 0 FALSE 0 0 NA A coding 854 2562 51 2612 PB.66.1 chr1 - 1681 6 full-splice_match DHRS3 ENST00000616661.4 1722 6 37 4 no_subtype FALSE canonical NA NA 541 None 32 3 0 FALSE 0 0 NA A coding 302 906 347 1252 PB.9451.2 chr17 + 2823 5 novel_not_in_catalog SLC16A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2678 None 2 17 0 TRUE 0 0 NA B coding 488 1464 138 1601 PB.6703.3 chr11 + 7022 51 novel_not_in_catalog SORL1 novel NA NA NA NA no_subtype TRUE canonical NA NA 6592 None 2 2 0 TRUE 0 0 NA B coding 2214 6642 16 6657 PB.9451.3 chr17 + 1964 6 novel_not_in_catalog SLC16A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1800 None 25 4 0 TRUE 0 0 NA B coding 465 1395 68 1462 PB.7177.1 chr12 - 4366 16 full-splice_match CDK17 ENST00000543119.6 2442 16 -59 -1865 no_subtype FALSE canonical NA NA 554 None 3 10 0 FALSE 0 0 NA C coding 523 1569 584 2152 PB.7177.2 chr12 - 2645 17 full-splice_match CDK17 ENST00000261211.7 4157 17 -2 1514 no_subtype FALSE canonical NA NA 577 None 5 3 0 FALSE 0 0 NA C coding 523 1569 607 2175 PB.3301.4 chr5 + 2637 11 incomplete-splice_match PIK3R1 ENST00000521657.5 3891 16 1232 22 internal_fragment FALSE canonical NA NA 1317 None 13 6 0 FALSE 0 0 NA C coding 454 1362 143 1504 PB.5755.10 chr10 - 1962 2 novel_not_in_catalog HNRNPF novel NA NA NA NA no_subtype FALSE canonical NA NA 53 None 8 3 1 FALSE 0 0 NA C coding 414 1242 109 1350 PB.9806.1 chr19 + 1804 9 full-splice_match CALR ENST00000316448.9 1903 9 94 5 no_subtype FALSE canonical NA NA 1032 None 90 6 0 FALSE 0 0 NA A coding 296 888 343 1230 PB.9597.1 chr18 - 3104 12 novel_not_in_catalog VPS4B novel NA NA NA NA no_subtype TRUE canonical NA NA 168 None 201 17 1 TRUE 0 0 NA A coding 444 1332 142 1473 PB.3301.1 chr5 + 3889 16 full-splice_match PIK3R1 ENST00000521657.5 3891 16 -21 23 no_subtype TRUE canonical NA NA 2570 None 4 5 0 FALSE 0 0 NA C coding 724 2172 586 2757 PB.3301.3 chr5 + 3680 1 genic_intron novelGene_643 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7696.2 chr14 - 4414 2 antisense novelGene_RP11-286O18.1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 876 None 2 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4279.1 chr7 + 2067 1 incomplete-splice_match WIPI2 ENST00000288828.8 4476 13 2399 11 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8675.2 chr16 + 4085 23 novel_not_in_catalog FAM65A novel NA NA NA NA no_subtype FALSE canonical NA NA 3666 None 4 7 1 TRUE 0 0 NA B coding 500 1500 2262 3761 PB.11073.1 chrX - 1770 9 novel_not_in_catalog TSPAN6 novel NA NA NA NA no_subtype FALSE canonical NA NA 161 None 2 5 1 TRUE 0 0 NA A coding 245 735 75 809 PB.8840.1 chr17 - 1394 1 incomplete-splice_match METTL16 ENST00000571669.6 5606 9 3198 1015 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9615.3 chr18 - 1621 1 incomplete-splice_match MBP ENST00000397863.5 4800 4 681 2499 no_subtype FALSE canonical NA NA NA None 19 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8860.1 chr17 - 2720 16 novel_not_in_catalog ALOX15 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 37 None 12 6 2 TRUE 0 0 NA C coding 662 1986 59 2044 PB.9105.1 chr17 - 2474 8 full-splice_match NR1D1 ENST00000246672.3 2772 8 286 12 no_subtype FALSE canonical NA NA 376 None 2 1 0 FALSE 0 0 NA A coding 614 1842 346 2187 PB.7127.2 chr12 - 1853 1 novel_in_catalog KRR1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8860.2 chr17 - 2688 14 full-splice_match ALOX15 ENST00000293761.7 2677 14 -13 2 no_subtype FALSE canonical NA NA 162 None 7 3 0 FALSE 0 0 NA C coding 662 1986 28 2013 PB.4427.2 chr7 - 2906 3 novel_in_catalog ZNF680 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 166 None 3 13 0 FALSE 0 0 NA C coding 498 1494 137 1630 PB.4001.4 chr6 - 2894 23 incomplete-splice_match PHIP ENST00000275034.4 10460 40 -56 7622 internal_fragment FALSE canonical NA NA 264 None 103 0 0 FALSE 0 0 NA B coding 890 2670 225 2894 PB.4427.1 chr7 - 3007 4 full-splice_match ZNF680 ENST00000309683.10 3022 4 18 -3 no_subtype FALSE canonical NA NA 164 None 2 14 0 FALSE 0 0 NA C coding 530 1590 135 1724 PB.994.1 chr1 + 2796 4 full-splice_match TMCC2 ENST00000329800.7 2818 4 20 2 no_subtype FALSE canonical NA NA 1267 None 2 6 0 FALSE 0 0 NA A coding 469 1407 170 1576 PB.1720.1 chr2 + 1777 10 full-splice_match RBM45 ENST00000286070.9 1785 10 1 7 no_subtype FALSE canonical NA NA 1524 None 8 2 0 FALSE 0 0 NA A coding 474 1422 92 1513 PB.3890.11 chr6 + 2597 4 novel_in_catalog PI16 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2151 None 10 11 0 FALSE 0 0 NA C coding 170 510 1357 1866 PB.9396.2 chr17 + 2673 17 full-splice_match SEC14L1 ENST00000436233.8 5295 17 44 2578 no_subtype FALSE canonical NA NA 2262 None 5 5 0 FALSE 0 0 NA C coding 715 2145 221 2365 PB.553.1 chr1 - 2634 1 genic_intron novelGene_986 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2416.1 chr3 - 3247 13 novel_not_in_catalog GOLGB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 109 None 6 0 0 FALSE 0 0 NA B coding 1045 3135 112 3246 PB.962.1 chr1 + 3920 1 genic_intron novelGene_1378 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 21 0 FALSE 0 0 NA A coding 169 507 1937 2443 PB.6462.2 chr11 + 2640 18 full-splice_match DPP3 ENST00000532677.5 3078 18 428 10 no_subtype FALSE canonical NA NA 2071 None 54 3 0 FALSE 0 0 NA A coding 737 2211 31 2241 PB.2264.1 chr3 + 5400 23 novel_not_in_catalog SLMAP novel NA NA NA NA no_subtype FALSE canonical NA NA 3532 None 2 11 0 TRUE 0 0 NA C coding 787 2361 1163 3523 PB.2264.3 chr3 + 3091 11 full-splice_match SLMAP ENST00000417128.5 3066 11 14 -39 no_subtype FALSE canonical NA NA 1221 None 54 6 0 FALSE 0 0 NA C coding 359 1077 136 1212 PB.2264.2 chr3 + 2986 10 incomplete-splice_match SLMAP ENST00000295952.7 4420 21 1432 2 internal_fragment FALSE canonical NA NA 1116 None 34 6 0 FALSE 0 0 NA C coding 362 1086 121 1206 PB.8567.3 chr16 + 2103 2 full-splice_match ORAI3 ENST00000318663.4 2206 2 98 5 no_subtype FALSE canonical NA NA 354 None 3 9 0 FALSE 0 0 NA C coding 295 885 127 1011 PB.8567.2 chr16 + 2448 1 novel_in_catalog ORAI3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 13 0 FALSE 0 0 NA C coding 100 300 32 331 PB.7571.1 chr13 + 6265 49 novel_not_in_catalog COL4A2 novel NA NA NA NA no_subtype TRUE canonical NA NA 5169 None 8 13 2 TRUE 0 0 NA A coding 1712 5136 289 5424 PB.2264.6 chr3 + 2985 10 novel_not_in_catalog SLMAP novel NA NA NA NA no_subtype FALSE canonical NA NA 1114 None 6 6 0 FALSE 0 0 NA C coding 362 1086 119 1204 PB.58.4 chr1 - 2695 12 full-splice_match MTHFR ENST00000376590.7 6232 12 113 3424 no_subtype FALSE canonical NA NA 58 None 8 2 0 FALSE 0 0 NA C coding 656 1968 72 2039 PB.58.5 chr1 - 2768 12 full-splice_match MTHFR ENST00000376583.7 7044 12 -23 4299 no_subtype FALSE canonical NA NA 133 None 7 4 0 FALSE 0 0 NA C coding 697 2091 24 2114 PB.58.2 chr1 - 2968 1 incomplete-splice_match MTHFR ENST00000376583.7 7044 12 3752 325 no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA C coding 127 381 784 1164 PB.58.1 chr1 - 6668 13 novel_not_in_catalog MTHFR novel NA NA NA NA no_subtype FALSE non_canonical NA NA 75 None 4 22 1 TRUE 0 0 NA C coding 656 1968 89 2056 PB.468.4 chr1 - 2009 1 incomplete-splice_match RBMXL1 ENST00000321792.5 4799 2 284 2507 no_subtype FALSE canonical NA NA NA None 20 8 0 FALSE 0 0 NA C coding 390 1170 146 1315 PB.468.5 chr1 - 1597 3 full-splice_match RBMXL1 ENST00000413769.1 991 3 133 -739 no_subtype FALSE canonical NA NA 42 None 6 3 0 FALSE 0 0 NA C coding 390 1170 383 1552 PB.468.1 chr1 - 1806 14 full-splice_match KYAT3 ENST00000260508.8 2070 14 295 -31 no_subtype FALSE canonical NA NA 42 None 4 5 0 FALSE 0 0 NA A coding 454 1362 44 1405 PB.6446.1 chr11 + 3084 14 novel_in_catalog MUS81 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2632 None 3 12 1 FALSE 0 0 NA A coding 268 804 1404 2207 PB.468.3 chr1 - 3884 4 novel_not_in_catalog RBMXL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 185 None 2 23 1 TRUE 0 0 NA C coding 390 1170 526 1695 PB.2416.2 chr3 - 3080 12 novel_not_in_catalog GOLGB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 110 None 7 1 0 FALSE 0 0 NA B coding 989 2967 113 3079 PB.2204.1 chr3 + 3786 21 novel_not_in_catalog RBM6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3546 None 7 2 0 FALSE 0 0 NA A coding 1123 3369 301 3669 PB.5864.1 chr10 - 2004 1 genic_intron novelGene_726 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6170.1 chr11 - 3029 3 antisense novelGene_RP11-304C12.3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1648 None 6 11 1 FALSE 0 0 NA A coding 141 423 2311 2733 PB.4529.1 chr7 + 1556 10 full-splice_match ARPC1A ENST00000262942.9 1565 10 12 -3 no_subtype TRUE canonical NA NA 1186 None 68 2 0 FALSE 0 0 NA C coding 370 1110 113 1222 PB.8607.1 chr16 - 2947 1 genic_intron novelGene_522 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5453.1 chr9 + 2651 14 full-splice_match PRPF4 ENST00000374199.8 3212 14 368 193 no_subtype FALSE canonical NA NA 1405 None 32 13 1 FALSE 0 0 NA A coding 521 1563 34 1596 PB.8251.1 chr15 - 1182 3 full-splice_match MESDC2 ENST00000261758.5 4264 3 84 2998 no_subtype FALSE canonical NA NA 216 None 21 2 0 FALSE 0 0 NA A coding 234 702 4 705 PB.4148.6 chr6 - 3547 14 novel_not_in_catalog BCLAF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 98 None 2 8 2 TRUE 0 0 NA C coding 740 2220 213 2432 PB.4148.7 chr6 - 3153 14 novel_in_catalog BCLAF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 74 None 2 4 0 FALSE 0 0 NA C coding 579 1737 189 1925 PB.4148.4 chr6 - 3429 12 novel_not_in_catalog BCLAF1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 134 None 5 6 1 FALSE 0 0 NA C coding 800 2400 249 2648 PB.10630.1 chr22 - 1378 1 full-splice_match CLDN5 ENST00000618236.1 1374 1 -7 3 no_subtype FALSE canonical NA NA NA None 136 9 0 FALSE 0 0 NA A coding 218 654 153 806 PB.8969.1 chr17 - 1784 1 antisense novelGene_TVP23B_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4148.3 chr6 - 3418 12 full-splice_match BCLAF1 ENST00000527536.5 5371 12 -17 1970 no_subtype FALSE canonical NA NA 134 None 19 4 0 FALSE 0 0 NA C coding 871 2613 249 2861 PB.11134.1 chrX + 2850 2 full-splice_match ZBTB33 ENST00000326624.2 5211 2 102 2259 no_subtype FALSE canonical NA NA 124 None 13 3 0 FALSE 0 0 NA C coding 672 2016 127 2142 PB.11087.1 chrX - 2854 6 novel_not_in_catalog ARMCX2 novel NA NA NA NA no_subtype FALSE canonical NA NA 93 None 20 3 1 FALSE 0 0 NA B coding 632 1896 560 2455 PB.7759.1 chr14 + 5781 16 novel_in_catalog PLEKHG3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4419 None 2 4 0 FALSE 0 0 NA B coding 724 2172 2967 5138 PB.9423.1 chr17 - 2601 10 novel_not_in_catalog SGSH novel NA NA NA NA no_subtype TRUE non_canonical NA NA 145 None 40 9 1 TRUE 0 0 NA A coding 502 1506 58 1563 PB.4148.8 chr6 - 3165 13 full-splice_match BCLAF1 ENST00000531224.5 7263 13 53 4045 no_subtype FALSE canonical NA NA 86 None 31 3 0 FALSE 0 0 NA C coding 920 2760 201 2960 PB.4148.9 chr6 - 2997 13 full-splice_match BCLAF1 ENST00000530767.5 4186 13 -13 1202 no_subtype FALSE canonical NA NA 82 None 14 5 0 FALSE 0 0 NA C coding 747 2241 197 2437 PB.7424.1 chr13 + 5722 32 novel_not_in_catalog FRY novel NA NA NA NA no_subtype TRUE canonical NA NA 4856 None 2 4 0 TRUE 0 0 NA B coding 1685 5055 58 5112 PB.592.12 chr1 - 2722 18 full-splice_match CSDE1 ENST00000530886.5 3459 18 44 693 no_subtype FALSE canonical NA NA 59 None 7 7 1 FALSE 0 0 NA C coding 668 2004 545 2548 PB.664.1 chr1 - 2938 8 full-splice_match CTSK ENST00000271651.7 1692 8 -1288 42 no_subtype FALSE canonical NA NA 1398 None 109 5 0 FALSE 0 0 NA C coding 329 987 1400 2386 PB.10097.1 chr19 + 2256 13 full-splice_match NUCB1 ENST00000405315.8 2668 13 305 107 no_subtype FALSE canonical NA NA 1308 None 11 7 0 FALSE 0 0 NA A coding 461 1383 30 1412 PB.7424.5 chr13 + 2964 11 incomplete-splice_match FRY ENST00000380250.7 10688 62 7741 -17 internal_fragment FALSE canonical NA NA 1535 None 13 1 0 FALSE 0 0 NA B coding 568 1704 88 1791 PB.10765.2 chr22 - 1498 4 full-splice_match DNAL4 ENST00000216068.8 1504 4 -7 13 no_subtype FALSE canonical NA NA 113 None 13 5 0 FALSE 0 0 NA A coding 105 315 253 567 PB.2999.3 chr4 - 2028 1 genic_intron novelGene_971 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7877.4 chr14 - 3148 15 novel_not_in_catalog ITPK1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 29 None 2 12 3 TRUE 0 0 NA B coding 406 1218 238 1455 PB.2296.1 chr3 + 2872 2 novel_not_in_catalog ARL6IP5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 932 None 7 12 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.5397.4 chr9 + 2873 1 novel_in_catalog NANS novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9324.1 chr17 + 3165 12 full-splice_match ARSG ENST00000448504.6 4642 12 16 1461 no_subtype FALSE canonical NA NA 2083 None 7 8 0 FALSE 0 0 NA A coding 525 1575 781 2355 PB.8577.1 chr16 + 3944 24 incomplete-splice_match ITGAM ENST00000287497.12 3595 30 757 -1106 internal_fragment FALSE canonical NA NA 2705 None 2 17 0 FALSE 0 0 NA A coding 803 2409 366 2774 PB.2045.2 chr3 + 3268 1 novel_in_catalog RAB5A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 27 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6418.2 chr11 + 2784 13 novel_in_catalog PPP2R5B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2010 None 11 7 0 FALSE 0 0 NA C coding 321 963 596 1558 PB.1577.5 chr2 - 1717 5 incomplete-splice_match IWS1 ENST00000295321.8 2958 14 -13 1254 internal_fragment FALSE canonical NA NA 307 None 3 2 0 FALSE 0 0 NA C coding 481 1443 274 1716 PB.6418.1 chr11 + 2709 14 full-splice_match PPP2R5B ENST00000164133.6 2745 14 33 3 no_subtype FALSE canonical NA NA 1935 None 19 6 0 FALSE 0 0 NA C coding 497 1491 590 2080 PB.8914.1 chr17 - 4629 23 novel_in_catalog PER1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 23 None 2 24 2 FALSE 0 0 NA B coding 1290 3870 163 4032 PB.8914.3 chr17 - 3161 17 novel_in_catalog PER1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 46 None 2 7 0 FALSE 0 0 NA B coding 815 2445 186 2630 PB.2920.1 chr4 - 1506 7 full-splice_match COQ2 ENST00000311469.8 1641 7 124 11 no_subtype FALSE canonical NA NA 279 None 3 5 0 FALSE 0 0 NA A coding 371 1113 27 1139 PB.4132.1 chr6 + 2643 2 genic_intron novelGene_1147 novel NA NA NA NA no_subtype FALSE canonical NA NA 2625 None 2 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8914.4 chr17 - 2841 1 novel_in_catalog PER1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 33 16 0 FALSE 0 0 NA B coding 158 474 1798 2271 PB.10352.6 chr20 - 2842 18 full-splice_match RBM39 ENST00000403542.6 2883 18 38 3 no_subtype FALSE canonical NA NA 296 None 13 17 2 FALSE 0 0 NA C coding 373 1119 854 1972 PB.10352.5 chr20 - 2850 18 full-splice_match RBM39 ENST00000444878.5 2124 18 -12 -714 no_subtype FALSE canonical NA NA 320 None 4 6 0 FALSE 0 0 NA C coding 367 1101 878 1978 PB.10352.4 chr20 - 2903 19 novel_in_catalog RBM39 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 320 None 2 7 1 FALSE 0 0 NA C coding 266 798 878 1675 PB.10352.3 chr20 - 2704 16 full-splice_match RBM39 ENST00000528062.7 2421 16 2 -285 no_subtype FALSE canonical NA NA 296 None 14 6 0 FALSE 0 0 NA C coding 508 1524 310 1833 PB.10352.2 chr20 - 2738 18 novel_not_in_catalog RBM39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 281 None 3 11 2 TRUE 0 0 NA C coding 507 1521 345 1865 PB.10352.1 chr20 - 2078 17 full-splice_match RBM39 ENST00000253363.10 2488 17 -309 719 no_subtype FALSE canonical NA NA 320 None 73 4 0 FALSE 0 0 NA C coding 530 1590 334 1923 PB.9824.28 chr19 + 2981 18 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2357 None 12 11 2 TRUE 0 0 NA C coding 768 2304 81 2384 PB.6478.8 chr11 + 1716 10 novel_not_in_catalog TBC1D10C novel NA NA NA NA no_subtype FALSE canonical NA NA 1036 None 2 1 0 FALSE 0 0 NA C coding 446 1338 44 1381 PB.4393.1 chr7 - 1540 1 novel_in_catalog COA1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7292.1 chr12 - 2625 12 full-splice_match FBXO21 ENST00000622495.4 6040 12 60 3355 no_subtype FALSE canonical NA NA 254 None 66 2 0 FALSE 0 0 NA C coding 621 1863 16 1878 PB.2223.1 chr3 - 1473 2 antisense novelGene_RAD54L2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1427 None 2 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10352.9 chr20 - 2680 16 novel_in_catalog RBM39 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 296 None 14 6 0 FALSE 0 0 NA C coding 502 1506 310 1815 PB.10352.8 chr20 - 2742 17 full-splice_match RBM39 ENST00000361162.10 2831 17 64 25 no_subtype FALSE canonical NA NA 308 None 63 6 0 FALSE 0 0 NA C coding 524 1572 322 1893 PB.1452.1 chr2 + 2175 14 novel_not_in_catalog USP39 novel NA NA NA NA no_subtype TRUE canonical NA NA 1658 None 12 3 0 TRUE 0 0 NA A coding 565 1695 9 1703 PB.2174.2 chr3 - 2733 8 novel_in_catalog UQCRC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 78 None 3 6 0 FALSE 0 0 NA C coding 368 1104 10 1113 PB.9579.2 chr18 + 2969 1 genic_intron novelGene_560 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 19 0 FALSE 0 0 NA A coding 145 435 216 650 PB.1055.1 chr1 + 1717 1 genic_intron novelGene_1401 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.84.1 chr1 - 3938 17 full-splice_match EPHA2 ENST00000358432.7 3964 17 18 8 no_subtype FALSE canonical NA NA 222 None 5 17 0 FALSE 0 0 NA A coding 976 2928 138 3065 PB.8085.3 chr15 + 3227 2 novel_in_catalog TMOD3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 144 None 6 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5421.1 chr9 + 2666 7 novel_not_in_catalog TMEM38B novel NA NA NA NA no_subtype FALSE canonical NA NA 719 None 40 17 0 TRUE 0 0 NA A coding 261 783 150 932 PB.8085.1 chr15 + 1531 10 full-splice_match TMOD3 ENST00000308580.11 8255 10 57 6667 no_subtype FALSE canonical NA NA 1248 None 21 4 1 FALSE 0 0 NA C coding 352 1056 225 1280 PB.8085.6 chr15 + 1613 1 genic_intron novelGene_517 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8085.5 chr15 + 4251 9 novel_in_catalog TMOD3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1100 None 2 28 0 FALSE 0 0 NA C coding 352 1056 77 1132 PB.1690.1 chr2 + 2889 2 genic_intron novelGene_1304 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 27 None 8 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9199.4 chr17 - 3563 2 genic SCRN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1862 None 3 6 0 TRUE 0 0 NA B coding 121 363 3017 3379 PB.9199.3 chr17 - 1520 8 novel_in_catalog SCRN2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 92 None 30 2 0 FALSE 0 0 NA B coding 425 1275 93 1367 PB.9199.2 chr17 - 2768 6 novel_not_in_catalog SCRN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 92 None 4 4 0 TRUE 0 0 NA B coding 202 606 1595 2200 PB.9396.7 chr17 + 1625 1 novel_in_catalog SEC14L1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 7 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4971.1 chr8 - 1230 7 full-splice_match RPL7 ENST00000352983.6 1101 7 266 -395 no_subtype FALSE canonical NA NA 34 None 2 9 1 FALSE 0 0 NA A coding 248 744 21 764 PB.1950.1 chr2 - 3376 3 genic_intron novelGene_1419 novel NA NA NA NA no_subtype TRUE canonical NA NA 1335 None 3 21 1 FALSE 0 0 NA A coding 116 348 2095 2442 PB.11239.2 KI270727.1 - 2563 1 genic AC136352.3 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A coding 249 747 60 806 PB.3236.1 chr5 - 2615 13 novel_not_in_catalog C5orf34 novel NA NA NA NA no_subtype TRUE canonical NA NA 468 None 2 9 0 FALSE 0 0 NA A coding 638 1914 505 2418 PB.7163.10 chr12 + 3761 14 novel_not_in_catalog PLXNC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1306 None 4 17 0 TRUE 0 0 NA B coding 307 921 488 1408 PB.8.1 chr1 + 2065 3 full-splice_match CPTP ENST00000343938.8 2190 3 100 25 no_subtype FALSE canonical NA NA 433 None 7 10 0 FALSE 0 0 NA A coding 214 642 312 953 PB.7163.12 chr12 + 6428 5 novel_in_catalog PLXNC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2760 None 2 44 0 FALSE 0 0 NA B coding 118 354 17 370 PB.8061.1 chr15 + 1548 6 novel_not_in_catalog BLOC1S6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1015 None 5 6 1 TRUE 0 0 NA B coding 172 516 20 535 PB.4197.2 chr6 - 3095 3 novel_not_in_catalog ZBTB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 137 None 2 8 0 FALSE 0 0 NA C coding 514 1542 150 1691 PB.10584.1 chr21 + 1892 2 novel_not_in_catalog PKNOX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1699 None 2 16 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.3395.1 chr5 - 1588 8 incomplete-splice_match CHD1 ENST00000614616.4 8095 36 25 6482 internal_fragment FALSE canonical NA NA 394 None 3 4 0 FALSE 0 0 NA A coding 348 1044 543 1586 PB.9316.1 chr17 - 3632 12 novel_not_in_catalog PSMD12 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 198 None 3 23 1 TRUE 0 0 NA C coding 456 1368 91 1458 PB.9396.4 chr17 + 4351 17 novel_not_in_catalog SEC14L1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3688 None 2 22 3 TRUE 0 0 NA C coding 567 1701 319 2019 PB.6247.1 chr11 + 2816 4 novel_not_in_catalog METTL15 novel NA NA NA NA no_subtype FALSE canonical NA NA 599 None 2 10 0 FALSE 0 0 NA A coding 136 408 330 737 PB.9316.4 chr17 - 1528 11 full-splice_match PSMD12 ENST00000356126.7 4406 11 0 2878 no_subtype FALSE canonical NA NA 216 None 31 1 0 FALSE 0 0 NA C coding 456 1368 109 1476 PB.1567.3 chr2 + 2703 4 incomplete-splice_match RALB ENST00000420510.5 1252 5 178 -1629 internal_fragment FALSE canonical NA NA 549 None 7 9 0 FALSE 0 0 NA C coding 206 618 49 666 PB.5028.2 chr8 + 3076 15 novel_not_in_catalog PTDSS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1214 None 6 9 0 TRUE 0 0 NA B coding 420 1260 62 1321 PB.896.1 chr1 + 3044 4 incomplete-splice_match CEP350 ENST00000496440.1 765 5 255 -2534 internal_fragment FALSE canonical NA NA 475 None 2 10 0 FALSE 0 0 NA A coding 119 357 281 637 PB.4197.1 chr6 - 3109 3 full-splice_match ZBTB2 ENST00000325144.4 3090 3 -22 3 no_subtype FALSE canonical NA NA 151 None 20 7 0 FALSE 0 0 NA C coding 514 1542 164 1705 PB.3618.3 chr5 - 5389 14 novel_not_in_catalog ADAM19 novel NA NA NA NA no_subtype FALSE canonical NA NA 139 None 2 23 1 TRUE 0 0 NA B coding 576 1728 36 1763 PB.6631.2 chr11 - 4278 17 incomplete-splice_match NPAT ENST00000278612.8 6117 18 13 1826 internal_fragment FALSE canonical NA NA 130 None 4 2 0 FALSE 0 0 NA A coding 1395 4185 94 4278 PB.3618.2 chr5 - 6460 25 novel_not_in_catalog ADAM19 novel NA NA NA NA no_subtype TRUE canonical NA NA 173 None 45 24 1 TRUE 0 0 NA B coding 918 2754 80 2833 PB.4227.8 chr6 + 5585 15 novel_not_in_catalog SYTL3 novel NA NA NA NA no_subtype FALSE canonical NA NA 5214 None 2 41 3 TRUE 0 0 NA B coding 384 1152 472 1623 PB.2688.3 chr3 + 2456 3 full-splice_match NRROS ENST00000328557.4 2564 3 104 4 no_subtype FALSE canonical NA NA 207 None 46 9 0 FALSE 0 0 NA C coding 692 2076 100 2175 PB.5028.1 chr8 + 2459 14 novel_not_in_catalog PTDSS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1388 None 2 6 0 TRUE 0 0 NA B coding 450 1350 146 1495 PB.7292.2 chr12 - 2870 12 full-splice_match FBXO21 ENST00000330622.9 2906 12 -11 47 no_subtype FALSE canonical NA NA 250 None 33 5 0 FALSE 0 0 NA C coding 628 1884 12 1895 PB.4555.1 chr7 + 2557 14 novel_not_in_catalog AGFG2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1502 None 4 12 2 TRUE 0 0 NA A coding 492 1476 84 1559 PB.4227.3 chr6 + 5810 17 novel_not_in_catalog SYTL3 novel NA NA NA NA no_subtype FALSE canonical NA NA 5439 None 3 44 1 TRUE 0 0 NA B coding 452 1356 493 1848 PB.4227.4 chr6 + 2689 19 novel_not_in_catalog SYTL3 novel NA NA NA NA no_subtype TRUE canonical NA NA 2318 None 5 7 1 TRUE 0 0 NA B coding 610 1830 596 2425 PB.8646.2 chr16 + 2610 21 novel_not_in_catalog KATNB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2182 None 3 5 0 TRUE 0 0 NA B coding 672 2016 297 2312 PB.8646.1 chr16 + 2593 21 novel_not_in_catalog KATNB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2165 None 14 5 0 TRUE 0 0 NA B coding 655 1965 331 2295 PB.4227.7 chr6 + 2568 18 novel_not_in_catalog SYTL3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2197 None 8 8 1 TRUE 0 0 NA B coding 609 1827 478 2304 PB.3098.6 chr4 + 3119 1 antisense novelGene_RNF175_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 25 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.429.2 chr1 + 935 2 novel_in_catalog SRSF11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 362 None 4 4 0 FALSE 0 0 NA B coding 117 351 160 510 PB.3996.2 chr6 + 3224 1 genic_intron novelGene_703 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1604.2 chr2 + 2982 1 genic_intron novelGene_1162 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.466.6 chr1 - 2824 2 genic_intron novelGene_805 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 193 None 4 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3996.1 chr6 - 3711 7 full-splice_match TMEM30A ENST00000230461.10 4594 7 183 700 no_subtype TRUE canonical NA NA 384 None 3 14 0 FALSE 0 0 NA C coding 361 1083 148 1230 PB.6776.1 chr12 - 5956 34 novel_not_in_catalog VWF novel NA NA NA NA no_subtype TRUE canonical NA NA 66 None 3 3 0 TRUE 0 0 NA A coding 1867 5601 220 5820 PB.2688.6 chr3 + 5775 2 novel_in_catalog NRROS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3530 None 2 40 0 FALSE 0 0 NA C coding 692 2076 3423 5498 PB.3113.1 chr4 + 6191 21 novel_in_catalog RAPGEF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4159 None 2 8 0 FALSE 0 0 NA A coding 1394 4182 1 4182 PB.587.1 chr1 + 1748 3 full-splice_match OLFML3 ENST00000320334.4 1780 3 25 7 no_subtype FALSE canonical NA NA 449 None 10 2 0 FALSE 0 0 NA A coding 406 1218 50 1267 PB.10227.10 chr20 - 3115 1 novel_in_catalog SIRPB2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 7 0 FALSE 0 0 NA C coding 129 387 1301 1687 PB.10227.11 chr20 - 5455 2 full-splice_match SIRPB2 ENST00000609796.1 1111 2 33 -4377 no_subtype FALSE canonical NA NA 146 None 2 14 0 FALSE 0 0 NA C coding 239 717 1547 2263 PB.2345.1 chr3 - 1645 2 antisense novelGene_TRMT10C_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1520 None 6 7 1 FALSE 0 0 NA A coding 160 480 881 1360 PB.5176.2 chr8 - 4401 38 novel_not_in_catalog CPSF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 29 None 2 11 1 TRUE 0 0 NA C coding 1340 4020 44 4063 PB.1604.1 chr2 + 4135 24 full-splice_match RAB3GAP1 ENST00000264158.12 4914 24 32 747 no_subtype FALSE canonical NA NA 2720 None 24 6 0 FALSE 0 0 NA A coding 981 2943 12 2954 PB.3575.1 chr5 + 5272 20 full-splice_match HMGXB3 ENST00000502717.5 4974 20 1 -299 no_subtype TRUE canonical NA NA 3874 None 2 11 1 FALSE 0 0 NA A coding 1292 3876 464 4339 PB.1959.3 chr2 + 3205 27 novel_not_in_catalog ANO7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2599 None 2 7 2 TRUE 0 0 NA B coding 527 1581 1027 2607 PB.966.1 chr1 + 3097 6 novel_in_catalog PPP1R12B novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1124 None 10 12 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.10227.8 chr20 - 1647 5 full-splice_match SIRPB2 ENST00000359801.7 2642 5 -63 1058 no_subtype FALSE canonical NA NA 185 None 10 3 0 FALSE 0 0 NA C coding 342 1026 101 1126 PB.9239.1 chr17 - 2226 2 full-splice_match TOB1 ENST00000499247.2 2229 2 -11 14 no_subtype FALSE canonical NA NA 299 None 8 21 0 FALSE 0 0 NA A coding 345 1035 446 1480 PB.11106.5 chrX + 2559 1 incomplete-splice_match TMEM164 ENST00000372072.7 4975 6 2293 124 no_subtype FALSE canonical NA NA NA None 16 7 0 FALSE 0 0 NA C coding 137 411 1275 1685 PB.10227.7 chr20 - 2943 7 novel_in_catalog NSFL1C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 125 None 8 18 0 FALSE 0 0 NA B coding 262 786 21 806 PB.8975.2 chr17 + 2908 7 novel_not_in_catalog MAPK7 novel NA NA NA NA no_subtype FALSE canonical NA NA 2449 None 12 7 1 FALSE 0 0 NA B coding 816 2448 153 2600 PB.11106.3 chrX + 2725 1 genic_intron novelGene_983 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 14 0 FALSE 0 0 NA A coding 100 300 1816 2115 PB.8975.1 chr17 + 2877 7 novel_in_catalog MAPK7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2425 None 2 5 0 FALSE 0 0 NA B coding 816 2448 129 2576 PB.10664.1 chr22 + 1639 10 novel_not_in_catalog SMARCB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1276 None 76 2 0 TRUE 0 0 NA B coding 376 1128 186 1313 PB.10664.3 chr22 + 1655 10 novel_not_in_catalog SMARCB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1292 None 10 3 0 TRUE 0 0 NA B coding 385 1155 175 1329 PB.10664.2 chr22 + 1666 10 novel_not_in_catalog SMARCB1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1308 None 7 2 0 TRUE 0 0 NA B coding 311 933 413 1345 PB.10664.4 chr22 + 3051 8 novel_not_in_catalog SMARCB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1731 None 2 13 0 TRUE 0 0 NA B coding 287 861 173 1033 PB.3229.2 chr5 + 1478 7 full-splice_match FBXO4 ENST00000281623.7 1682 7 28 176 no_subtype FALSE canonical NA NA 1102 None 9 2 0 FALSE 0 0 NA C coding 387 1161 29 1189 PB.1392.10 chr2 + 1620 2 novel_in_catalog ARHGAP25 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 496 None 2 7 0 FALSE 0 0 NA B coding 121 363 314 676 PB.5708.2 chr10 + 2122 2 genic_intron novelGene_213 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 907 None 2 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5708.1 chr10 + 5775 4 antisense novelGene_PIP4K2A_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5743 None 6 38 3 FALSE 0 0 NA A coding 128 384 1050 1433 PB.1392.13 chr2 + 2632 1 genic_intron novelGene_653 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7027.1 chr12 + 1371 3 novel_not_in_catalog RPS26 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1270 None 3 13 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.5991.2 chr10 - 1339 9 novel_not_in_catalog CUEDC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 73 None 2 2 0 TRUE 0 0 NA B coding 169 507 84 590 PB.1885.4 chr2 + 3146 19 novel_not_in_catalog ACSL3 novel NA NA NA NA no_subtype TRUE canonical NA NA 2425 None 2 10 2 TRUE 0 0 NA C coding 709 2127 454 2580 PB.6968.1 chr12 - 2929 4 antisense novelGene_LARP4_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2650 None 12 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1484.1 chr2 + 2733 18 full-splice_match NCAPH ENST00000240423.8 2763 18 22 8 no_subtype FALSE canonical NA NA 2187 None 12 2 0 FALSE 0 0 NA A coding 741 2223 22 2244 PB.7461.1 chr13 - 2860 19 novel_not_in_catalog ENOX1 novel NA NA NA NA no_subtype TRUE canonical NA NA 225 None 4 1 0 TRUE 0 0 NA A coding 642 1926 510 2435 PB.10450.1 chr20 + 1594 1 genic_intron novelGene_526 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9225.1 chr17 - 1829 1 novel_in_catalog FAM117A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 1 0 FALSE 0 0 NA B coding 110 330 578 907 PB.9225.2 chr17 - 2821 2 novel_in_catalog FAM117A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1156 None 2 12 0 FALSE 0 0 NA B coding 141 423 971 1393 PB.5728.4 chr10 + 2512 8 novel_in_catalog MAP3K8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1389 None 2 10 0 FALSE 0 0 NA C coding 467 1401 117 1517 PB.5728.1 chr10 + 2674 8 full-splice_match MAP3K8 ENST00000542547.5 2782 8 104 4 no_subtype FALSE canonical NA NA 1550 None 7 9 0 FALSE 0 0 NA C coding 438 1314 365 1678 PB.6523.2 chr11 + 2439 15 novel_not_in_catalog PPME1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1231 None 7 3 0 TRUE 0 0 NA C coding 356 1068 180 1247 PB.2325.1 chr3 - 3021 2 novel_not_in_catalog DHFRL1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 187 None 5 26 1 FALSE 0 0 NA A coding 173 519 301 819 PB.987.1 chr1 + 3752 1 genic_intron novelGene_1382 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6752.1 chr11 + 2844 20 novel_not_in_catalog GLB1L2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2688 None 3 10 1 TRUE 0 0 NA B coding 636 1908 35 1942 PB.157.1 chr1 + 3455 2 genic_intron novelGene_248 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 720 None 2 24 1 FALSE 0 0 NA A coding 183 549 579 1127 PB.3899.1 chr6 + 2841 4 novel_not_in_catalog ZFAND3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 459 None 2 10 0 TRUE 0 0 NA B coding 112 336 276 611 PB.3899.2 chr6 + 5908 2 genic_intron novelGene_374 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4114 None 2 47 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3899.4 chr6 + 2690 4 novel_not_in_catalog ZFAND3 novel NA NA NA NA no_subtype TRUE canonical NA NA 307 None 3 13 0 TRUE 0 0 NA B coding 46 138 322 459 PB.8233.2 chr15 + 3744 11 novel_not_in_catalog HMG20A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1117 None 2 40 5 TRUE 0 0 NA C coding 205 615 122 736 PB.8233.1 chr15 + 3784 10 full-splice_match HMG20A ENST00000336216.8 4046 10 251 11 no_subtype FALSE canonical NA NA 1157 None 35 17 0 FALSE 0 0 NA C coding 347 1041 108 1148 PB.5594.1 chr9 + 3345 1 antisense novelGene_TSC1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 23 0 FALSE 0 0 NA A coding 111 333 976 1308 PB.6362.2 chr11 + 3626 17 novel_in_catalog TKFC novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3064 None 2 12 0 FALSE 0 0 NA B coding 575 1725 1490 3214 PB.9753.2 chr19 + 1350 10 novel_not_in_catalog MRPL4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 911 None 2 2 0 FALSE 0 0 NA C coding 311 933 173 1105 PB.9753.1 chr19 + 1435 9 full-splice_match MRPL4 ENST00000253099.10 1455 9 25 -5 no_subtype FALSE canonical NA NA 1001 None 12 3 0 FALSE 0 0 NA C coding 311 933 263 1195 PB.6362.1 chr11 + 2782 19 novel_not_in_catalog TKFC novel NA NA NA NA no_subtype FALSE canonical NA NA 2217 None 2 4 0 FALSE 0 0 NA B coding 575 1725 643 2367 PB.6362.4 chr11 + 3110 18 novel_not_in_catalog TKFC novel NA NA NA NA no_subtype FALSE canonical NA NA 2544 None 2 5 0 FALSE 0 0 NA B coding 575 1725 970 2694 PB.11213.4 chrX + 3705 9 novel_in_catalog IKBKG novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2996 None 7 9 0 FALSE 0 0 NA C coding 216 648 2489 3136 PB.6336.4 chr11 + 2846 1 incomplete-splice_match CTNND1 ENST00000526772.5 4966 14 2115 6 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C coding 125 375 988 1362 PB.8192.5 chr15 - 2300 11 novel_in_catalog PKM novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 74 None 3 4 0 FALSE 0 0 NA C coding 531 1593 88 1680 PB.8192.4 chr15 - 2344 11 full-splice_match PKM ENST00000335181.9 2318 11 -30 4 no_subtype FALSE canonical NA NA 121 None 109 3 0 FALSE 0 0 NA C coding 531 1593 135 1727 PB.6336.1 chr11 + 6127 19 full-splice_match CTNND1 ENST00000358694.10 6135 19 5 3 no_subtype FALSE canonical NA NA 3248 None 2 14 0 FALSE 0 0 NA C coding 933 2799 459 3257 PB.6336.3 chr11 + 3904 14 incomplete-splice_match CTNND1 ENST00000531014.5 5053 15 415 734 internal_fragment FALSE canonical NA NA 1756 None 2 8 0 FALSE 0 0 NA C coding 497 1491 275 1765 PB.10693.2 chr22 - 2763 20 full-splice_match ASCC2 ENST00000307790.7 2793 20 21 9 no_subtype FALSE canonical NA NA 76 None 92 5 2 FALSE 0 0 NA C coding 757 2271 94 2364 PB.4637.1 chr7 - 2725 2 genic_intron novelGene_1077 novel NA NA NA NA no_subtype FALSE canonical NA NA 2174 None 10 9 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9072.1 chr17 + 750 3 full-splice_match CCL4 ENST00000615863.1 904 3 143 11 no_subtype FALSE canonical NA NA 364 None 2 1 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.660.1 chr1 + 1259 1 antisense novelGene_GOLPH3L_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11213.8 chrX + 3268 8 novel_in_catalog IKBKG novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2185 None 9 9 1 FALSE 0 0 NA C coding 269 807 142 948 PB.8620.4 chr16 - 3131 13 novel_in_catalog AMFR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 94 None 4 8 0 FALSE 0 0 NA B coding 548 1644 32 1675 PB.10243.2 chr20 - 5922 18 incomplete-splice_match SIGLEC1 ENST00000344754.5 6720 21 792 6 5prime_fragment FALSE canonical NA NA 181 None 2 9 0 FALSE 0 0 NA B coding 1385 4155 181 4335 PB.10243.3 chr20 - 3607 10 incomplete-splice_match SIGLEC1 ENST00000344754.5 6720 21 3106 7 5prime_fragment FALSE canonical NA NA 150 None 2 10 0 FALSE 0 0 NA B coding 652 1956 66 2021 PB.4905.1 chr8 - 3121 2 antisense novelGene_HOOK3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1634 None 2 21 1 FALSE 0 0 NA A coding 78 234 66 299 PB.1449.1 chr2 - 1496 8 novel_not_in_catalog TMEM150A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 59 None 2 10 1 FALSE 0 0 NA A coding 187 561 406 966 PB.6259.1 chr11 - 2810 21 full-splice_match CSTF3 ENST00000323959.8 2797 21 -20 7 no_subtype FALSE canonical NA NA 187 None 30 1 0 FALSE 0 0 NA A coding 717 2151 161 2311 PB.5413.1 chr9 + 3915 21 novel_not_in_catalog RNF20 novel NA NA NA NA no_subtype FALSE canonical NA NA 2818 None 29 2 0 TRUE 0 0 NA B coding 975 2925 68 2992 PB.5413.2 chr9 + 1804 14 novel_not_in_catalog RNF20 novel NA NA NA NA no_subtype FALSE canonical NA NA 1599 None 4 0 0 TRUE 0 0 NA B coding 578 1734 70 1803 PB.7959.49 chr14 - 1486 7 fusion IGHA1,CH17-212P11.5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 106 None 2 6 2 TRUE 0 0 NA B coding 254 762 678 1439 PB.7959.46 chr14 - 1455 7 fusion IGHV1-12,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 52 None 2 16 3 TRUE 0 0 NA A coding 254 762 644 1405 PB.7959.47 chr14 - 1494 10 fusion IGHV3-62,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 118 None 3 24 3 TRUE 0 0 NA B coding 139 417 973 1389 PB.4818.2 chr8 + 2468 15 novel_not_in_catalog DMTN novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1302 None 4 5 1 FALSE 0 0 NA B coding 346 1038 203 1240 PB.4818.3 chr8 + 2592 15 novel_not_in_catalog DMTN novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1418 None 2 5 1 FALSE 0 0 NA B coding 346 1038 319 1356 PB.7959.42 chr14 - 1468 8 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 85 None 2 12 4 TRUE 0 0 NA B coding 472 1416 3 1418 PB.4818.5 chr8 + 2521 15 novel_not_in_catalog DMTN novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1348 None 2 4 1 FALSE 0 0 NA B coding 346 1038 249 1286 PB.7959.40 chr14 - 1503 7 fusion IGHV3-62,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 124 None 4 16 3 TRUE 0 0 NA B coding 254 762 692 1453 PB.9684.1 chr19 - 1422 13 full-splice_match STAP2 ENST00000594605.5 1426 13 2 2 no_subtype FALSE canonical NA NA 224 None 2 5 0 FALSE 0 0 NA A coding 403 1209 123 1331 PB.6358.1 chr11 + 3072 11 full-splice_match CD5 ENST00000347785.7 3221 11 141 8 no_subtype FALSE canonical NA NA 1515 None 98 10 0 FALSE 0 0 NA A coding 495 1485 26 1510 PB.3885.6 chr6 + 1852 7 full-splice_match SRSF3 ENST00000477442.6 1095 7 -27 -730 no_subtype FALSE canonical NA NA 1043 None 3 16 0 FALSE 0 0 NA C coding 124 372 121 492 PB.3885.5 chr6 + 2696 6 novel_in_catalog SRSF3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1882 None 3 10 0 FALSE 0 0 NA C coding 128 384 123 506 PB.3885.4 chr6 + 3650 6 full-splice_match SRSF3 ENST00000373715.10 4222 6 -3 575 no_subtype FALSE canonical NA NA 586 None 106 41 0 FALSE 0 0 NA C coding 164 492 120 611 PB.3885.3 chr6 + 1735 7 novel_not_in_catalog SRSF3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 921 None 3 33 1 FALSE 0 0 NA C coding 124 372 123 494 PB.3885.2 chr6 + 1622 7 novel_not_in_catalog SRSF3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 666 None 3 20 2 TRUE 0 0 NA C coding 124 372 123 494 PB.3885.1 chr6 + 3083 5 novel_in_catalog SRSF3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2755 None 19 10 0 FALSE 0 0 NA C coding 128 384 121 504 PB.1980.1 chr3 + 3477 11 novel_not_in_catalog THUMPD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1456 None 4 20 0 TRUE 0 0 NA A coding 507 1521 98 1618 PB.1441.3 chr2 - 2042 6 novel_not_in_catalog TGOLN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 73 None 50 9 2 TRUE 0 0 NA B coding 184 552 28 579 PB.3370.13 chr5 - 5921 2 novel_not_in_catalog MEF2C novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3106 None 2 37 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.4602.3 chr7 - 2869 21 full-splice_match SLC26A3 ENST00000340010.9 2863 21 -12 6 no_subtype FALSE canonical NA NA 109 None 1222 9 0 FALSE 0 0 NA C coding 764 2292 198 2489 PB.176.1 chr1 - 1888 6 novel_not_in_catalog GPN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 609 None 3 5 1 TRUE 0 0 NA C coding 310 930 199 1128 PB.4350.1 chr7 + 3909 2 genic AC006978.6 novel NA NA NA NA no_subtype FALSE canonical NA NA 573 None 2 19 0 FALSE 0 0 NA A coding 132 396 2942 3337 PB.1441.2 chr2 - 2864 12 novel_not_in_catalog RETSAT novel NA NA NA NA no_subtype FALSE non_canonical NA NA 223 None 2 5 1 TRUE 0 0 NA A coding 439 1317 52 1368 PB.2710.1 chr4 + 3304 15 novel_in_catalog WHSC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2159 None 2 4 0 FALSE 0 0 NA A coding 791 2373 56 2428 PB.3370.10 chr5 - 3129 7 novel_not_in_catalog MEF2C novel NA NA NA NA no_subtype TRUE non_canonical NA NA 222 None 3 19 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.4602.5 chr7 - 3108 22 novel_not_in_catalog SLC26A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 90 None 41 10 1 TRUE 0 0 NA C coding 764 2292 432 2723 PB.8888.3 chr17 + 3021 16 novel_in_catalog ACADVL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2714 None 2 11 0 FALSE 0 0 NA C coding 275 825 73 897 PB.8888.2 chr17 + 2917 17 novel_in_catalog ACADVL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2615 None 3 18 0 FALSE 0 0 NA C coding 270 810 1944 2753 PB.8888.1 chr17 + 2199 20 full-splice_match ACADVL ENST00000356839.9 2323 20 109 15 no_subtype FALSE canonical NA NA 1897 None 19 3 0 FALSE 0 0 NA C coding 655 1965 71 2035 PB.3370.11 chr5 - 3135 7 novel_not_in_catalog MEF2C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 230 None 3 23 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.1441.4 chr2 - 2825 1 incomplete-splice_match TGOLN2 ENST00000398263.6 6138 5 2134 1180 no_subtype FALSE canonical NA NA NA None 11 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3094.1 chr4 + 2928 9 full-splice_match ARFIP1 ENST00000353617.6 3111 9 178 5 no_subtype TRUE canonical NA NA 1087 None 11 4 0 FALSE 0 0 NA A coding 373 1119 122 1240 PB.535.1 chr1 - 2120 5 novel_not_in_catalog TAF13 novel NA NA NA NA no_subtype FALSE canonical NA NA 65 None 2 20 1 TRUE 0 0 NA A coding 124 372 39 410 PB.6715.1 chr11 - 1811 7 full-splice_match ESAM ENST00000278927.9 1826 7 -6 21 no_subtype FALSE canonical NA NA 206 None 40 2 0 FALSE 0 0 NA A coding 390 1170 137 1306 PB.4629.2 chr7 + 2920 11 novel_in_catalog ING3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1222 None 2 10 0 FALSE 0 0 NA C coding 418 1254 122 1375 PB.4629.3 chr7 + 1702 11 full-splice_match ING3 ENST00000427726.5 1718 11 26 -10 no_subtype FALSE canonical NA NA 1129 None 2 1 0 FALSE 0 0 NA C coding 192 576 668 1243 PB.4629.1 chr7 + 1776 12 full-splice_match ING3 ENST00000315870.9 3777 12 59 1942 no_subtype FALSE canonical NA NA 1229 None 5 0 0 FALSE 0 0 NA C coding 418 1254 90 1343 PB.4370.1 chr7 + 2921 3 novel_not_in_catalog RP11-379H18.1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2185 None 2 23 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.2700.1 chr4 + 2807 4 full-splice_match ZNF141 ENST00000240499.7 2970 4 -56 219 no_subtype FALSE canonical NA NA 431 None 5 12 0 FALSE 0 0 NA A coding 474 1422 206 1627 PB.8616.1 chr16 + 2786 13 full-splice_match MMP2 ENST00000219070.8 3741 13 499 456 no_subtype FALSE canonical NA NA 1889 None 74 4 0 FALSE 0 0 NA C coding 656 1968 23 1990 PB.8616.2 chr16 + 2717 14 novel_not_in_catalog MMP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1818 None 5 3 0 TRUE 0 0 NA C coding 584 1752 168 1919 PB.3094.2 chr4 - 3937 2 genic_intron novelGene_1253 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1484 None 6 36 1 FALSE 0 0 NA A coding 118 354 2259 2612 PB.3589.5 chr5 - 2713 8 novel_not_in_catalog CCDC69 novel NA NA NA NA no_subtype FALSE canonical NA NA 72 None 3 5 1 TRUE 0 0 NA B coding 149 447 195 641 PB.7537.1 chr13 - 3383 2 novel_not_in_catalog SPRY2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1201 None 8 11 1 TRUE 0 0 NA A coding 315 945 1664 2608 PB.10546.1 chr21 - 1310 1 genic_intron novelGene_339 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4253.1 chr6 + 3074 13 full-splice_match SMOC2 ENST00000356284.6 3117 13 34 9 no_subtype FALSE canonical NA NA 1509 None 48 7 0 FALSE 0 0 NA A coding 446 1338 187 1524 PB.2370.1 chr3 + 1540 2 genic_intron novelGene_996 novel NA NA NA NA no_subtype FALSE canonical NA NA 1268 None 2 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.769.6 chr1 + 2657 6 novel_not_in_catalog MNDA novel NA NA NA NA no_subtype FALSE canonical NA NA 2418 None 15 15 1 FALSE 0 0 NA C coding 162 486 1776 2261 PB.5437.4 chr9 - 3046 1 novel_in_catalog KIAA0368 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.182.1 chr1 - 1550 1 full-splice_match CHCHD3P3 ENST00000446783.1 640 1 -126 -784 no_subtype FALSE canonical NA NA NA None 16 5 0 FALSE 0 0 NA A coding 101 303 127 429 PB.5437.1 chr9 - 3271 1 genic KIAA0368 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7294.2 chr12 - 3786 10 novel_not_in_catalog VSIG10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 296 None 2 11 2 TRUE 0 0 NA C coding 540 1620 218 1837 PB.7294.1 chr12 - 4000 9 full-splice_match VSIG10 ENST00000359236.9 4946 9 55 891 no_subtype FALSE canonical NA NA 301 None 2 7 0 FALSE 0 0 NA C coding 540 1620 223 1842 PB.4911.7 chr8 - 6582 35 incomplete-splice_match PRKDC ENST00000338368.7 12784 85 6819 -617 5prime_fragment FALSE canonical NA NA 126 None 2 13 0 FALSE 0 0 NA B coding 1817 5451 74 5524 PB.4810.2 chr8 + 3255 2 genic_intron novelGene_170 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 25 None 5 24 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8004.1 chr15 + 1592 11 full-splice_match ZFYVE19 ENST00000355341.8 2775 11 665 518 no_subtype FALSE canonical NA NA 1173 None 2 4 0 FALSE 0 0 NA A coding 396 1188 62 1249 PB.6554.2 chr11 + 3646 1 antisense novelGene_AP000580.1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 34 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1849.1 chr2 - 3214 1 incomplete-splice_match IGFBP5 ENST00000233813.4 6215 4 2766 236 no_subtype FALSE canonical NA NA NA None 22 15 0 FALSE 0 0 NA C coding 143 429 649 1077 PB.1849.2 chr2 - 1497 4 full-splice_match IGFBP5 ENST00000233813.4 6215 4 199 4519 no_subtype FALSE canonical NA NA 888 None 14 3 0 FALSE 0 0 NA C coding 272 816 552 1367 PB.10724.5 chr22 + 1270 5 novel_in_catalog TOM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 358 None 3 8 1 FALSE 0 0 NA C coding 161 483 28 510 PB.2835.1 chr4 - 1713 15 full-splice_match TXK ENST00000264316.8 2914 15 39 1162 no_subtype FALSE canonical NA NA 63 None 6 0 0 FALSE 0 0 NA C coding 527 1581 48 1628 PB.10724.1 chr22 + 3824 15 novel_not_in_catalog TOM1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2916 None 2 11 0 FALSE 0 0 NA C coding 516 1548 69 1616 PB.10724.2 chr22 + 1618 3 full-splice_match TOM1 ENST00000487670.1 849 3 0 -769 no_subtype FALSE canonical NA NA 195 None 3 6 0 FALSE 0 0 NA C coding 106 318 59 376 PB.10724.3 chr22 + 2268 15 full-splice_match TOM1 ENST00000449058.6 2389 15 99 22 no_subtype FALSE canonical NA NA 1350 None 4 4 0 FALSE 0 0 NA C coding 492 1476 27 1502 PB.6478.12 chr11 + 1916 9 novel_not_in_catalog TBC1D10C novel NA NA NA NA no_subtype FALSE canonical NA NA 1236 None 4 1 0 TRUE 0 0 NA C coding 219 657 110 766 PB.6478.10 chr11 + 1833 10 novel_not_in_catalog TBC1D10C novel NA NA NA NA no_subtype FALSE canonical NA NA 1153 None 8 3 0 FALSE 0 0 NA C coding 446 1338 161 1498 PB.6478.11 chr11 + 2643 7 novel_in_catalog TBC1D10C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1963 None 10 5 1 FALSE 0 0 NA C coding 220 660 1649 2308 PB.6478.14 chr11 + 3282 2 incomplete-splice_match TBC1D10C ENST00000526474.1 4480 3 1196 2 internal_fragment FALSE canonical NA NA 2602 None 2 15 0 FALSE 0 0 NA C coding 118 354 2594 2947 PB.104.1 chr1 + 1548 1 incomplete-splice_match OTUD3 ENST00000375120.3 6397 8 4840 10 no_subtype FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5086.1 chr8 + 6440 48 full-splice_match COL14A1 ENST00000297848.7 6466 48 26 0 no_subtype TRUE canonical NA NA 5555 None 3 12 0 FALSE 0 0 NA A coding 1789 5367 266 5632 PB.8161.12 chr15 - 2158 2 genic_intron novelGene_618 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 494 None 4 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7253.1 chr12 + 1865 15 full-splice_match TCTN1 ENST00000551590.5 2309 15 138 306 no_subtype FALSE non_canonical NA NA 1783 None 2 1 1 FALSE 0 0 NA A coding 587 1761 19 1779 PB.4293.1 chr7 + 3181 3 genic AC005532.5 novel NA NA NA NA no_subtype FALSE canonical NA NA 3109 None 2 37 2 TRUE 0 0 NA A non_coding NA NA NA NA PB.2815.1 chr4 + 1726 3 full-splice_match RHOH ENST00000381799.9 4305 3 122 2457 no_subtype FALSE canonical NA NA 393 None 3 2 0 FALSE 0 0 NA C coding 191 573 603 1175 PB.6826.1 chr12 + 1603 6 full-splice_match KLRD1 ENST00000336164.8 3258 6 52 1603 no_subtype FALSE canonical NA NA 627 None 4 7 0 FALSE 0 0 NA C coding 156 468 278 745 PB.704.1 chr1 + 2904 11 novel_not_in_catalog IL6R novel NA NA NA NA no_subtype FALSE canonical NA NA 1188 None 52 3 0 TRUE 0 0 NA C coding 468 1404 29 1432 PB.6826.2 chr12 + 3096 7 novel_not_in_catalog KLRD1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2710 None 2 24 1 TRUE 0 0 NA C coding 156 468 274 741 PB.4597.4 chr7 - 3108 3 genic_intron novelGene_963 novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 2 23 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4461.1 chr7 + 4257 32 novel_not_in_catalog GTF2I novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4167 None 2 26 3 TRUE 0 0 NA B coding 901 2703 356 3058 PB.6334.2 chr11 + 2720 3 novel_in_catalog TMX2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1847 None 2 23 0 FALSE 0 0 NA C coding 115 345 1876 2220 PB.5374.8 chr9 + 3616 1 genic_intron novelGene_851 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10469.1 chr20 - 2526 6 full-splice_match PRELID3B ENST00000355937.8 2626 6 92 8 no_subtype FALSE canonical NA NA 119 None 15 14 0 FALSE 0 0 NA A coding 194 582 88 669 PB.9318.2 chr17 - 1672 1 antisense novelGene_RP11-360N9.3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9318.3 chr17 - 2588 3 genic_intron novelGene_637 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 220 None 5 9 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.8150.1 chr15 - 1859 5 novel_in_catalog OAZ2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 187 None 23 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10157.1 chr19 - 3803 8 novel_not_in_catalog ZNF160 novel NA NA NA NA no_subtype FALSE canonical NA NA 151 None 2 9 0 TRUE 0 0 NA A coding 818 2454 398 2851 PB.5374.1 chr9 + 3162 18 full-splice_match FGD3 ENST00000416701.6 3432 18 263 7 no_subtype FALSE canonical NA NA 2270 None 52 5 0 FALSE 0 0 NA C coding 724 2172 348 2519 PB.5374.7 chr9 + 5108 15 novel_in_catalog FGD3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4216 None 2 15 0 FALSE 0 0 NA C coding 348 1044 551 1594 PB.5712.1 chr10 - 1925 10 novel_not_in_catalog PRTFDC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 72 None 6 0 0 TRUE 0 0 NA A coding 225 675 28 702 PB.7959.101 chr14 - 1497 11 fusion IGHA1,IGHV3-13 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 126 None 3 16 5 TRUE 0 0 NA A coding 254 762 691 1452 PB.3450.1 chr5 - 1477 5 novel_not_in_catalog C5orf63 novel NA NA NA NA no_subtype FALSE canonical NA NA 39 None 4 6 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2499.1 chr3 + 2614 6 novel_not_in_catalog PXYLP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 562 None 7 4 0 TRUE 0 0 NA B coding 480 1440 55 1494 PB.4597.1 chr7 - 2695 22 full-splice_match COG5 ENST00000297135.7 4060 22 606 759 no_subtype FALSE canonical NA NA 106 None 22 4 0 FALSE 0 0 NA C coding 829 2487 13 2499 PB.7317.1 chr12 + 1874 11 novel_not_in_catalog ACADS novel NA NA NA NA no_subtype TRUE canonical NA NA 1164 None 14 5 0 TRUE 0 0 NA A coding 412 1236 79 1314 PB.6334.1 chr11 + 1571 8 full-splice_match TMX2 ENST00000278422.8 1631 8 53 7 no_subtype FALSE canonical NA NA 703 None 17 7 0 FALSE 0 0 NA C coding 227 681 167 847 PB.1593.1 chr2 + 3383 1 genic_intron novelGene_1146 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5881.4 chr10 + 2889 2 novel_in_catalog GHITM novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2596 None 2 24 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5881.1 chr10 + 1922 9 full-splice_match GHITM ENST00000372134.5 2128 9 132 74 no_subtype FALSE canonical NA NA 1014 None 35 6 0 FALSE 0 0 NA C coding 345 1035 62 1096 PB.6834.1 chr12 - 5575 23 full-splice_match LRP6 ENST00000261349.8 10020 23 -167 4612 no_subtype FALSE canonical NA NA 299 None 2 10 0 FALSE 0 0 NA A coding 1613 4839 245 5083 PB.9674.1 chr19 - 3591 10 full-splice_match CACTIN ENST00000429344.6 3612 10 12 9 no_subtype FALSE canonical NA NA 208 None 3 12 0 FALSE 0 0 NA A coding 758 2274 42 2315 PB.5881.2 chr10 + 1896 10 novel_not_in_catalog GHITM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1559 None 7 6 1 TRUE 0 0 NA C coding 345 1035 62 1096 PB.7959.105 chr14 - 1476 9 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 81 None 2 14 4 TRUE 0 0 NA B coding 251 753 679 1431 PB.31.1 chr1 - 3121 15 novel_in_catalog PLEKHG5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 258 None 6 6 0 FALSE 0 0 NA A coding 846 2538 148 2685 PB.11056.2 chrX - 1576 7 novel_not_in_catalog ITM2A novel NA NA NA NA no_subtype FALSE canonical NA NA 32 None 2 7 0 FALSE 0 0 NA A coding 285 855 18 872 PB.7142.1 chr12 + 2613 2 novel_not_in_catalog TMTC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 636 None 12 28 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.7860.2 chr14 + 2872 1 novel_in_catalog C14orf159 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 18 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10231.1 chr20 + 3356 3 antisense novelGene_SNRPB_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3117 None 2 17 0 FALSE 0 0 NA A coding 118 354 920 1273 PB.5900.1 chr10 - 2769 10 full-splice_match LIPA ENST00000336233.9 2782 10 3 10 no_subtype FALSE canonical NA NA 319 None 126 8 0 FALSE 0 0 NA A coding 399 1197 321 1517 PB.2829.1 chr4 + 6512 24 novel_not_in_catalog ATP10D novel NA NA NA NA no_subtype FALSE canonical NA NA 4170 None 12 15 0 TRUE 0 0 NA A coding 1234 3702 806 4507 PB.9403.6 chr17 - 2885 21 novel_not_in_catalog TMC6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 54 None 5 7 3 TRUE 0 0 NA B coding 805 2415 246 2660 PB.481.1 chr1 - 2917 19 full-splice_match GLMN ENST00000370360.7 1995 19 29 -951 no_subtype FALSE canonical NA NA 23 None 5 14 0 FALSE 0 0 NA A coding 594 1782 54 1835 PB.5629.2 chr9 - 2248 9 full-splice_match FBXW5 ENST00000325285.7 2274 9 22 4 no_subtype FALSE canonical NA NA 35 None 5 5 0 FALSE 0 0 NA C coding 566 1698 59 1756 PB.2809.1 chr4 - 2791 8 full-splice_match RPL9 ENST00000295955.13 750 8 33 -2074 no_subtype FALSE canonical NA NA 25 None 122 28 1 FALSE 0 0 NA C coding 192 576 27 602 PB.1846.1 chr2 - 1638 8 full-splice_match PECR ENST00000265322.7 1853 8 5 210 no_subtype FALSE canonical NA NA 194 None 26 3 0 FALSE 0 0 NA A coding 322 966 14 979 PB.10466.2 chr20 + 1478 14 novel_not_in_catalog GNAS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1057 None 13 0 0 TRUE 0 0 NA C coding 380 1140 62 1201 PB.5284.21 chr9 - 8231 57 novel_not_in_catalog TLN1 novel NA NA NA NA no_subtype TRUE canonical NA NA 122 None 3 9 1 FALSE 0 0 NA C coding 2541 7623 156 7778 PB.5185.1 chr8 - 1915 6 full-splice_match ZNF34 ENST00000343459.8 1901 6 -23 9 no_subtype FALSE canonical NA NA 49 None 4 8 0 FALSE 0 0 NA A coding 560 1680 90 1769 PB.10836.1 chr22 + 1399 2 novel_in_catalog PIM3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 265 None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7898.1 chr14 + 2025 2 novel_in_catalog GSKIP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 262 None 9 3 0 FALSE 0 0 NA A coding 139 417 5 421 PB.10466.5 chr20 + 1550 14 novel_not_in_catalog GNAS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1047 None 6 0 0 TRUE 0 0 NA C coding 379 1137 55 1191 PB.1412.2 chr2 + 6180 54 novel_not_in_catalog DYSF novel NA NA NA NA no_subtype FALSE canonical NA NA 5879 None 2 0 0 TRUE 0 0 NA B coding 1942 5826 90 5915 PB.5910.1 chr10 + 3505 6 novel_in_catalog HECTD2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1180 None 6 10 0 FALSE 0 0 NA A coding 127 381 918 1298 PB.8691.3 chr16 + 1541 1 novel_in_catalog NFATC3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10466.7 chr20 + 1391 13 novel_not_in_catalog GNAS novel NA NA NA NA no_subtype FALSE canonical NA NA 887 None 20 0 0 FALSE 0 0 NA C coding 321 963 69 1031 PB.2778.1 chr4 + 5875 2 genic_intron novelGene_252 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5074 None 3 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2098.4 chr3 - 2635 15 full-splice_match PLCD1 ENST00000334661.4 2769 15 120 14 no_subtype FALSE canonical NA NA 137 None 19 1 0 FALSE 0 0 NA C coding 756 2268 104 2371 PB.2098.5 chr3 - 2690 15 full-splice_match PLCD1 ENST00000463876.5 2963 15 267 6 no_subtype FALSE canonical NA NA 184 None 5 1 0 FALSE 0 0 NA C coding 777 2331 88 2418 PB.2098.2 chr3 - 2725 14 novel_in_catalog PLCD1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 145 None 8 6 0 FALSE 0 0 NA C coding 701 2103 112 2214 PB.2098.3 chr3 - 2688 14 novel_in_catalog PLCD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 116 None 4 3 0 FALSE 0 0 NA C coding 722 2166 20 2185 PB.9876.2 chr19 + 6123 29 novel_not_in_catalog MAST3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3631 None 6 11 1 FALSE 0 0 NA B coding 1243 3729 436 4164 PB.2437.2 chr3 - 3187 18 novel_not_in_catalog MYLK novel NA NA NA NA no_subtype FALSE canonical NA NA 839 None 155 0 0 TRUE 0 0 NA B coding 992 2976 158 3133 PB.7917.1 chr14 + 1464 5 full-splice_match YY1 ENST00000262238.8 6697 5 186 5047 no_subtype FALSE canonical NA NA 1136 None 3 2 0 FALSE 0 0 NA A coding 414 1242 75 1316 PB.6047.5 chr10 - 1465 9 full-splice_match CACUL1 ENST00000369151.7 11311 9 285 9561 no_subtype FALSE canonical NA NA 566 None 4 4 0 FALSE 0 0 NA C coding 369 1107 200 1306 PB.10910.1 chrX + 3745 4 intergenic novelGene_361 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3189 None 2 33 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.980.1 chr1 + 2742 3 full-splice_match PRELP ENST00000343110.2 5747 3 10 2995 no_subtype FALSE canonical NA NA 1090 None 69 9 0 FALSE 0 0 NA A coding 382 1146 118 1263 PB.9654.1 chr19 + 1579 9 full-splice_match SF3A2 ENST00000221494.9 1963 9 358 26 no_subtype FALSE canonical NA NA 692 None 81 2 0 FALSE 0 0 NA A coding 464 1392 78 1469 PB.1966.1 chr2 - 1025 5 full-splice_match DTYMK ENST00000305784.6 1232 5 190 17 no_subtype FALSE canonical NA NA 148 None 4 6 0 FALSE 0 0 NA A coding 212 636 19 654 PB.7373.1 chr12 + 1632 15 full-splice_match NOC4L ENST00000330579.5 1632 15 -17 17 no_subtype TRUE canonical NA NA 1489 None 19 1 0 FALSE 0 0 NA A coding 516 1548 59 1606 PB.6487.1 chr11 - 2249 11 full-splice_match UNC93B1 ENST00000227471.6 2316 11 65 2 no_subtype FALSE canonical NA NA 111 None 3 1 0 FALSE 0 0 NA A coding 597 1791 16 1806 PB.8592.3 chr16 + 4357 32 novel_in_catalog PHKB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3244 None 2 3 0 FALSE 0 0 NA C coding 1086 3258 122 3379 PB.8592.2 chr16 + 4029 33 novel_not_in_catalog PHKB novel NA NA NA NA no_subtype FALSE canonical NA NA 3263 None 3 0 0 TRUE 0 0 NA C coding 1086 3258 141 3398 PB.2064.1 chr3 + 3063 1 incomplete-splice_match RBMS3 ENST00000434693.6 8540 15 5468 10 no_subtype FALSE canonical NA NA NA None 11 26 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3355.4 chr5 - 5495 1 genic_intron novelGene_756 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 32 0 FALSE 0 0 NA A coding 112 336 3144 3479 PB.3355.2 chr5 - 1532 1 genic_intron novelGene_755 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3355.1 chr5 - 3279 18 novel_not_in_catalog SSBP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 159 None 4 13 0 TRUE 0 0 NA A coding 361 1083 98 1180 PB.8592.4 chr16 + 3007 1 novel_in_catalog PHKB novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9737.1 chr19 + 3049 3 novel_not_in_catalog HNRNPM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2710 None 3 29 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.2518.1 chr3 - 1769 10 novel_not_in_catalog PLSCR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 91 None 2 7 1 FALSE 0 0 NA A coding 318 954 196 1149 PB.10135.3 chr19 + 3175 13 novel_not_in_catalog SIGLEC9 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3048 None 3 18 3 TRUE 0 0 NA B coding 461 1383 66 1448 PB.5247.1 chr9 + 3178 1 antisense novelGene_MOB3B_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6704.3 chr11 - 3034 1 antisense novelGene_SORL1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 30 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6704.1 chr11 - 2025 1 antisense novelGene_SORL1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 10 0 FALSE 0 0 NA B coding 85 255 58 312 PB.5356.2 chr9 + 4188 5 full-splice_match SPIN1 ENST00000485565.6 706 5 5 -3487 no_subtype FALSE canonical NA NA 575 None 2 35 0 FALSE 0 0 NA C coding 131 393 380 772 PB.5356.3 chr9 + 2960 1 incomplete-splice_match SPIN1 ENST00000375859.3 4484 6 1520 5 no_subtype FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5356.1 chr9 + 4003 4 novel_in_catalog SPIN1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 389 None 3 26 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3046.2 chr4 + 4050 20 full-splice_match NAA15 ENST00000296543.9 6222 20 103 2069 no_subtype FALSE canonical NA NA 2620 None 3 1 0 FALSE 0 0 NA C coding 866 2598 221 2818 PB.3696.5 chr5 - 3045 9 novel_not_in_catalog TBC1D9B novel NA NA NA NA no_subtype FALSE canonical NA NA 182 None 2 14 1 TRUE 0 0 NA B coding 609 1827 65 1891 PB.8733.1 chr16 + 1514 10 novel_not_in_catalog DHODH novel NA NA NA NA no_subtype TRUE canonical NA NA 1154 None 3 1 0 TRUE 0 0 NA A coding 395 1185 22 1206 PB.3194.1 chr5 - 2699 4 full-splice_match GOLPH3 ENST00000265070.6 2721 4 2 20 no_subtype FALSE canonical NA NA 539 None 18 4 0 FALSE 0 0 NA C coding 298 894 315 1208 PB.3194.3 chr5 - 1642 1 incomplete-splice_match GOLPH3 ENST00000265070.6 2721 4 1056 24 no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA C coding 100 300 279 578 PB.724.1 chr1 + 1363 11 novel_in_catalog FDPS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1108 None 2 0 0 FALSE 0 0 NA B coding 419 1257 50 1306 PB.1855.2 chr2 - 3052 1 antisense novelGene_ARPC2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 16 20 0 FALSE 0 0 NA A coding 134 402 1069 1470 PB.5615.1 chr9 - 1225 10 novel_not_in_catalog FCN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 143 None 35 0 0 TRUE 0 0 NA A coding 326 978 41 1018 PB.6803.1 chr12 + 3960 18 full-splice_match CLSTN3 ENST00000266546.10 4185 18 210 15 no_subtype TRUE canonical NA NA 2970 None 11 6 0 FALSE 0 0 NA A coding 956 2868 241 3108 PB.9378.2 chr17 - 1361 9 full-splice_match MRPL38 ENST00000309352.3 1888 9 521 6 no_subtype FALSE canonical NA NA 84 None 18 1 0 FALSE 0 0 NA C coding 380 1140 18 1157 PB.9378.3 chr17 - 1359 9 novel_not_in_catalog MRPL38 novel NA NA NA NA no_subtype FALSE canonical NA NA 80 None 2 2 0 FALSE 0 0 NA C coding 346 1038 116 1153 PB.4770.2 chr7 - 3932 1 genic_intron novelGene_1261 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 37 0 FALSE 0 0 NA A coding 63 189 153 341 PB.1085.1 chr1 - 1478 7 full-splice_match SDE2 ENST00000272091.7 3975 7 9 2488 no_subtype FALSE canonical NA NA 130 None 12 0 0 FALSE 0 0 NA A coding 451 1353 11 1363 PB.2389.1 chr3 - 1805 1 genic_intron novelGene_1015 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9378.4 chr17 - 1436 10 novel_not_in_catalog RP11-552F3.12 novel NA NA NA NA no_subtype FALSE canonical NA NA 72 None 4 2 0 FALSE 0 0 NA A coding 346 1038 195 1232 PB.5826.5 chr10 - 3233 2 novel_not_in_catalog PRF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 585 None 2 13 0 TRUE 0 0 NA C coding 194 582 1734 2315 PB.1651.1 chr2 - 1810 3 novel_in_catalog NR4A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 205 None 2 1 0 FALSE 0 0 NA A coding 298 894 332 1225 PB.9158.2 chr17 + 2751 8 novel_not_in_catalog CD300LG novel NA NA NA NA no_subtype FALSE canonical NA NA 916 None 3 10 0 FALSE 0 0 NA B coding 321 963 65 1027 PB.9158.3 chr17 + 2784 7 novel_not_in_catalog CD300LG novel NA NA NA NA no_subtype FALSE canonical NA NA 944 None 2 23 1 FALSE 0 0 NA B coding 338 1014 42 1055 PB.233.1 chr1 - 1595 7 full-splice_match ZBTB8OS ENST00000468695.5 1601 7 7 -1 no_subtype FALSE canonical NA NA 145 None 18 12 0 FALSE 0 0 NA A coding 179 537 13 549 PB.1732.8 chr2 + 4182 24 novel_not_in_catalog DNAJC10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2796 None 2 9 0 TRUE 0 0 NA B coding 793 2379 427 2805 PB.3369.1 chr5 + 1637 1 genic_intron novelGene_807 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA A coding 4 12 347 358 PB.2427.4 chr3 + 6184 7 novel_not_in_catalog PARP14 novel NA NA NA NA no_subtype FALSE canonical NA NA 3110 None 5 18 1 FALSE 0 0 NA B coding 1027 3081 438 3518 PB.1732.1 chr2 + 3513 25 novel_not_in_catalog DNAJC10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2892 None 4 5 0 TRUE 0 0 NA B coding 793 2379 523 2901 PB.1732.2 chr2 + 3741 24 novel_not_in_catalog DNAJC10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2844 None 13 7 0 TRUE 0 0 NA B coding 793 2379 475 2853 PB.2427.7 chr3 + 3560 10 novel_not_in_catalog PARP14 novel NA NA NA NA no_subtype FALSE canonical NA NA 3093 None 2 9 0 FALSE 0 0 NA B coding 653 1959 23 1981 PB.1732.4 chr2 + 4285 25 novel_not_in_catalog DNAJC10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2900 None 8 7 0 FALSE 0 0 NA B coding 793 2379 531 2909 PB.2427.1 chr3 + 6678 17 novel_not_in_catalog PARP14 novel NA NA NA NA no_subtype FALSE canonical NA NA 5145 None 24 16 1 FALSE 0 0 NA B coding 1665 4995 438 5432 PB.2427.2 chr3 + 5636 8 novel_not_in_catalog PARP14 novel NA NA NA NA no_subtype FALSE canonical NA NA 3347 None 14 15 1 FALSE 0 0 NA B coding 1048 3144 438 3581 PB.2427.3 chr3 + 4703 14 novel_not_in_catalog PARP14 novel NA NA NA NA no_subtype FALSE canonical NA NA 4236 None 9 4 1 FALSE 0 0 NA B coding 1422 4266 438 4703 PB.3349.1 chr5 + 6057 18 full-splice_match ZFYVE16 ENST00000338008.9 6773 18 16 700 no_subtype FALSE canonical NA NA 4625 None 6 13 1 FALSE 0 0 NA C coding 1539 4617 165 4781 PB.6489.10 chr11 + 2496 21 novel_not_in_catalog TCIRG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2343 None 2 22 5 TRUE 0 0 NA C coding 490 1470 950 2419 PB.10466.6 chr20 + 1550 13 novel_not_in_catalog GNAS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1047 None 2 2 0 TRUE 0 0 NA C coding 379 1137 55 1191 PB.596.1 chr1 - 2588 11 full-splice_match CASQ2 ENST00000261448.5 2674 11 66 20 no_subtype FALSE canonical NA NA 408 None 2 12 0 FALSE 0 0 NA A coding 399 1197 175 1371 PB.2012.4 chr3 - 1463 1 genic_intron novelGene_103 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 17 7 0 FALSE 0 0 NA A coding 122 366 992 1357 PB.4022.7 chr6 - 1374 10 incomplete-splice_match SYNCRIP ENST00000369622.7 3023 11 355 1294 internal_fragment FALSE canonical NA NA 134 None 6 0 0 FALSE 0 0 NA C coding 409 1227 147 1373 PB.4682.1 chr7 - 3862 11 novel_not_in_catalog SLC35B4 novel NA NA NA NA no_subtype FALSE canonical NA NA 300 None 2 22 0 TRUE 0 0 NA A coding 331 993 224 1216 PB.4149.2 chr6 + 3357 2 genic_intron novelGene_1170 novel NA NA NA NA no_subtype FALSE canonical NA NA 1260 None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6077.4 chr10 - 1611 1 genic_intron novelGene_1086 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A coding 100 300 650 949 PB.2012.1 chr3 - 3665 13 novel_not_in_catalog IQSEC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 42 None 19 3 0 FALSE 0 0 NA B coding 814 2442 344 2785 PB.2012.2 chr3 - 3424 12 novel_not_in_catalog IQSEC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 58 None 2 3 0 FALSE 0 0 NA B coding 814 2442 65 2506 PB.10173.1 chr19 + 2573 8 novel_not_in_catalog KMT5C novel NA NA NA NA no_subtype FALSE canonical NA NA 1409 None 2 4 0 FALSE 0 0 NA A coding 347 1041 860 1900 PB.1391.1 chr2 + 1408 9 full-splice_match PLEK ENST00000234313.7 2869 9 148 1313 no_subtype FALSE canonical NA NA 947 None 105 1 0 FALSE 0 0 NA C coding 350 1050 32 1081 PB.3438.1 chr5 + 3363 10 novel_in_catalog SNCAIP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2801 None 2 6 0 FALSE 0 0 NA A coding 919 2757 48 2804 PB.7112.3 chr12 + 2511 10 novel_not_in_catalog CCT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2238 None 2 14 1 TRUE 0 0 NA C coding 292 876 1391 2266 PB.2178.1 chr3 - 2684 11 full-splice_match PRKAR2A ENST00000265563.12 6471 11 -32 3819 no_subtype FALSE canonical NA NA 544 None 25 4 0 FALSE 0 0 NA A coding 404 1212 283 1494 PB.5817.1 chr10 + 1625 8 full-splice_match TSPAN15 ENST00000373290.6 1698 8 69 4 no_subtype FALSE canonical NA NA 788 None 4 6 0 FALSE 0 0 NA C coding 294 882 54 935 PB.11023.7 chrX + 3530 11 novel_not_in_catalog NONO novel NA NA NA NA no_subtype FALSE canonical NA NA 2306 None 2 18 1 TRUE 0 0 NA C coding 343 1029 133 1161 PB.11023.6 chrX + 2617 12 novel_not_in_catalog NONO novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1393 None 3 10 1 TRUE 0 0 NA C coding 471 1413 113 1525 PB.7959.122 chr14 - 1479 8 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 87 None 2 22 3 TRUE 0 0 NA B coding 251 753 682 1434 PB.7112.1 chr12 + 1924 16 full-splice_match CCT2 ENST00000299300.10 2041 16 109 8 no_subtype TRUE canonical NA NA 1656 None 31 2 0 FALSE 0 0 NA C coding 535 1605 80 1684 PB.11023.3 chrX + 2934 1 novel_in_catalog NONO novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 14 26 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.11023.2 chrX + 3128 12 novel_not_in_catalog NONO novel NA NA NA NA no_subtype FALSE canonical NA NA 1908 None 12 13 1 TRUE 0 0 NA C coding 390 1170 109 1278 PB.11023.1 chrX + 2636 12 novel_not_in_catalog NONO novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1414 None 299 10 1 TRUE 0 0 NA C coding 394 1182 135 1316 PB.6344.1 chr11 - 2660 3 novel_not_in_catalog OSBP novel NA NA NA NA no_subtype FALSE canonical NA NA 125 None 2 13 1 FALSE 0 0 NA A coding 115 345 138 482 PB.7959.128 chr14 - 1513 9 fusion IGHV4-34,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 82 None 2 14 3 TRUE 0 0 NA A coding 463 1389 81 1469 PB.6331.2 chr11 - 3301 5 novel_not_in_catalog UBE2L6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 69 None 4 13 1 TRUE 0 0 NA C coding 149 447 55 501 PB.822.1 chr1 - 3592 3 antisense novelGene_HSD17B7_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 835 None 3 20 2 FALSE 0 0 NA A coding 135 405 3186 3590 PB.4395.1 chr7 + 2545 6 novel_in_catalog BLVRA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 622 None 2 17 0 FALSE 0 0 NA A coding 273 819 60 878 PB.8131.3 chr15 + 1937 1 incomplete-splice_match RAB8B ENST00000321437.8 4943 8 2990 17 no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9285.1 chr17 + 5706 30 full-splice_match MRC2 ENST00000303375.9 5988 30 272 10 no_subtype FALSE canonical NA NA 4349 None 15 6 0 FALSE 0 0 NA A coding 1479 4437 131 4567 PB.6331.3 chr11 - 1193 4 full-splice_match UBE2L6 ENST00000287156.8 1354 4 150 11 no_subtype FALSE canonical NA NA 73 None 29 7 0 FALSE 0 0 NA C coding 149 447 59 505 PB.3461.6 chr5 - 2965 1 genic_intron novelGene_1141 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 15 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1788.2 chr2 + 2617 2 full-splice_match C2orf69 ENST00000319974.5 3728 2 143 968 no_subtype FALSE canonical NA NA 373 None 4 7 0 FALSE 0 0 NA A coding 269 807 389 1195 PB.3622.1 chr5 + 3325 1 antisense novelGene_RNF145_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 29 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2406.4 chr3 - 3564 1 genic_intron novelGene_1052 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 54 0 FALSE 0 0 NA A coding 159 477 1715 2191 PB.3593.1 chr5 - 2124 10 full-splice_match SPARC ENST00000231061.8 3701 10 230 1347 no_subtype FALSE canonical NA NA 71 None 2 1 0 FALSE 0 0 NA C coding 303 909 85 993 PB.1103.1 chr1 - 3346 3 novel_not_in_catalog CCSAP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 21 None 2 37 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.9971.1 chr19 + 2997 5 genic_intron novelGene_383 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2688 None 10 25 0 FALSE 0 0 NA B coding 115 345 1505 1849 PB.7331.4 chr12 - 2510 2 novel_in_catalog RHOF novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 164 None 3 6 0 FALSE 0 0 NA B coding 155 465 27 491 PB.5807.3 chr10 + 1385 10 full-splice_match HNRNPH3 ENST00000354695.5 1332 10 -58 5 no_subtype FALSE canonical NA NA 1095 None 2 1 0 FALSE 0 0 NA C coding 331 993 177 1169 PB.4400.1 chr7 + 2075 13 full-splice_match DBNL ENST00000494774.5 2117 13 -18 60 no_subtype FALSE canonical NA NA 1195 None 44 3 0 FALSE 0 0 NA A coding 431 1293 40 1332 PB.5643.1 chr9 - 1793 9 novel_in_catalog DPH7 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 254 None 2 4 0 FALSE 0 0 NA A coding 276 828 633 1460 PB.2912.1 chr4 + 1965 6 full-splice_match ENOPH1 ENST00000273920.7 2025 6 49 11 no_subtype FALSE canonical NA NA 865 None 11 13 0 FALSE 0 0 NA C coding 261 783 220 1002 PB.1432.7 chr2 + 2950 14 novel_not_in_catalog TTC31 novel NA NA NA NA no_subtype FALSE canonical NA NA 1639 None 11 6 0 TRUE 0 0 NA B coding 539 1617 10 1626 PB.6063.2 chr10 + 3042 6 novel_not_in_catalog PLEKHA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 323 None 4 10 0 FALSE 0 0 NA C coding 200 600 36 635 PB.7648.2 chr14 - 5661 31 novel_in_catalog HECTD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 144 None 2 2 0 FALSE 0 0 NA B coding 1832 5496 166 5661 PB.1275.10 chr2 - 2717 16 novel_not_in_catalog EIF2AK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 23 None 2 16 1 TRUE 0 0 NA B coding 262 786 207 992 PB.1275.11 chr2 - 2693 17 novel_not_in_catalog EIF2AK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 90 None 7 15 2 TRUE 0 0 NA B coding 262 786 274 1059 PB.7647.1 chr14 + 2855 11 full-splice_match COCH ENST00000216361.8 2397 11 17 -475 no_subtype FALSE canonical NA NA 1856 None 2 15 0 FALSE 0 0 NA A coding 550 1650 380 2029 PB.10516.1 chr21 - 3623 6 novel_not_in_catalog RWDD2B novel NA NA NA NA no_subtype TRUE canonical NA NA 58 None 2 16 0 TRUE 0 0 NA A coding 313 939 10 948 PB.1275.15 chr2 - 1802 13 novel_not_in_catalog EIF2AK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 17 None 2 12 1 TRUE 0 0 NA B coding 262 786 201 986 PB.5251.1 chr9 + 2001 1 full-splice_match RBMXP2 ENST00000434705.1 1168 1 -155 -678 no_subtype FALSE canonical NA NA NA None 18 8 0 FALSE 0 0 NA A coding 256 768 156 923 PB.851.1 chr1 - 1457 12 full-splice_match NME7 ENST00000367811.7 1642 12 178 7 no_subtype FALSE canonical NA NA 82 None 4 1 0 FALSE 0 0 NA A coding 376 1128 80 1207 PB.1224.1 chr2 + 3094 6 full-splice_match RAB10 ENST00000264710.4 3535 6 396 45 no_subtype FALSE canonical NA NA 622 None 4 3 0 FALSE 0 0 NA C coding 200 600 104 703 PB.4569.1 chr7 + 1217 5 full-splice_match AP1S1 ENST00000337619.9 1306 5 86 3 no_subtype FALSE canonical NA NA 461 None 3 6 0 FALSE 0 0 NA A coding 158 474 33 506 PB.1968.1 chr2 - 2085 5 full-splice_match PDCD1 ENST00000334409.9 2114 5 19 10 no_subtype FALSE canonical NA NA 127 None 3 13 0 FALSE 0 0 NA A coding 288 864 52 915 PB.574.2 chr1 - 1544 1 genic_intron novelGene_1001 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.574.3 chr1 - 1234 1 antisense novelGene_CAPZA1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8344.2 chr16 - 5499 15 novel_not_in_catalog TMEM8A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 891 None 2 32 3 TRUE 0 0 NA B coding 563 1689 2632 4320 PB.8344.3 chr16 - 2981 11 incomplete-splice_match TMEM8A ENST00000431232.6 3691 13 634 76 5prime_fragment FALSE canonical NA NA 34 None 2 13 0 FALSE 0 0 NA B coding 578 1734 107 1840 PB.8632.1 chr16 + 2552 17 novel_not_in_catalog RSPRY1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2404 None 5 3 0 TRUE 0 0 NA B coding 537 1611 888 2498 PB.2293.1 chr3 - 3578 18 novel_not_in_catalog TMF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 347 None 2 3 0 TRUE 0 0 NA B coding 1093 3279 206 3484 PB.8339.1 chr16 + 892 4 novel_not_in_catalog HBA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 654 None 2 3 1 TRUE 0 0 NA A coding 223 669 112 780 PB.4097.2 chr6 - 3957 3 novel_not_in_catalog TSPYL4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2797 None 6 20 1 FALSE 0 0 NA B coding 414 1242 58 1299 PB.4097.1 chr6 - 4010 3 novel_not_in_catalog TSPYL4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2848 None 7 23 2 FALSE 0 0 NA B coding 414 1242 109 1350 PB.6118.1 chr11 + 456 5 full-splice_match RPLP2 ENST00000321153.8 781 5 321 4 no_subtype FALSE canonical NA NA 344 None 2 2 0 FALSE 0 0 NA A coding 115 345 74 418 PB.863.1 chr1 - 2095 3 full-splice_match MYOC ENST00000037502.10 2095 3 -4 4 no_subtype FALSE canonical NA NA 680 None 6 3 0 FALSE 0 0 NA A coding 504 1512 77 1588 PB.2489.1 chr3 - 6054 34 full-splice_match STAG1 ENST00000383202.6 6055 34 -10 11 no_subtype FALSE canonical NA NA 184 None 16 17 0 FALSE 0 0 NA A coding 1258 3774 268 4041 PB.7301.1 chr12 - 2654 1 antisense novelGene_BICDL1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2406.2 chr3 - 1497 11 full-splice_match GSK3B ENST00000264235.12 7711 11 825 5389 no_subtype FALSE canonical NA NA 246 None 2 1 0 FALSE 0 0 NA A coding 420 1260 159 1418 PB.1164.1 chr1 + 3880 12 novel_not_in_catalog NLRP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 3184 None 5 9 0 TRUE 0 0 NA A coding 1034 3102 180 3281 PB.7965.1 chr15 + 1324 10 full-splice_match SNRPN ENST00000390687.8 1528 10 62 142 no_subtype FALSE canonical NA NA 1149 None 50 0 0 FALSE 0 0 NA A coding 240 720 465 1184 PB.2197.2 chr3 + 1992 19 novel_not_in_catalog APEH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1730 None 2 0 0 TRUE 0 0 NA B coding 313 939 895 1833 PB.2445.3 chr3 - 3623 14 novel_not_in_catalog OSBPL11 novel NA NA NA NA no_subtype TRUE canonical NA NA 699 None 5 6 0 TRUE 0 0 NA B coding 747 2241 536 2776 PB.675.1 chr1 - 1362 6 full-splice_match VPS72 ENST00000368892.8 1527 6 6 159 no_subtype FALSE canonical NA NA 203 None 15 1 0 FALSE 0 0 NA A coding 364 1092 87 1178 PB.3267.1 chr5 + 5541 1 genic_intron novelGene_553 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7311.1 chr12 - 1498 7 full-splice_match COQ5 ENST00000288532.10 1535 7 27 10 no_subtype TRUE canonical NA NA 216 None 9 0 0 FALSE 0 0 NA A coding 307 921 75 995 PB.1945.1 chr2 + 1854 1 antisense novelGene_PER2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7090.1 chr12 - 3825 15 novel_not_in_catalog GNS novel NA NA NA NA no_subtype TRUE canonical NA NA 351 None 82 16 0 TRUE 0 0 NA B coding 552 1656 160 1815 PB.7234.1 chr12 + 1686 1 novel_in_catalog ACACB novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9404.4 chr17 + 3145 16 novel_not_in_catalog TMC8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2621 None 2 12 0 TRUE 0 0 NA B coding 450 1350 362 1711 PB.27.2 chr1 - 861 5 novel_not_in_catalog RPL22 novel NA NA NA NA no_subtype FALSE canonical NA NA 35 None 6 6 0 TRUE 0 0 NA B coding 128 384 24 407 PB.27.3 chr1 - 1692 1 incomplete-splice_match RPL22 ENST00000234875.8 2078 4 371 16 no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7067.1 chr12 - 3025 21 novel_not_in_catalog AVIL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 106 None 2 5 0 TRUE 0 0 NA A coding 819 2457 126 2582 PB.1238.1 chr2 - 2230 10 full-splice_match PPM1G ENST00000344034.4 2311 10 67 14 no_subtype FALSE canonical NA NA 318 None 13 5 0 FALSE 0 0 NA A coding 546 1638 199 1836 PB.9120.4 chr17 + 2754 1 novel_in_catalog EIF1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 33 9 0 FALSE 0 0 NA C coding 76 228 154 381 PB.9120.3 chr17 + 2006 3 novel_in_catalog EIF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1158 None 13 6 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.9120.2 chr17 + 2607 2 full-splice_match EIF1 ENST00000586699.1 572 2 -1018 -1017 no_subtype FALSE canonical NA NA 1057 None 6 7 0 FALSE 0 0 NA C coding 76 228 155 382 PB.9120.1 chr17 + 674 4 full-splice_match EIF1 ENST00000469257.1 2330 4 -7 1663 no_subtype FALSE canonical NA NA 450 None 160 2 0 FALSE 0 0 NA C coding 113 339 154 492 PB.6883.1 chr12 + 1821 8 full-splice_match MRPS35 ENST00000081029.7 1888 8 64 3 no_subtype FALSE canonical NA NA 709 None 13 3 0 FALSE 0 0 NA A coding 323 969 8 976 PB.7471.2 chr13 - 3179 16 full-splice_match LCP1 ENST00000323076.6 3787 16 163 445 no_subtype FALSE canonical NA NA 51 None 654 6 0 FALSE 0 0 NA C coding 627 1881 76 1956 PB.3956.2 chr6 - 1586 13 novel_not_in_catalog PLA2G7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 122 None 2 15 1 TRUE 0 0 NA C coding 409 1227 329 1555 PB.86.5 chr1 + 1702 4 novel_not_in_catalog SZRD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 370 None 3 4 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.2111.1 chr3 + 807 6 full-splice_match RPL14 ENST00000338970.10 7072 6 47 6218 no_subtype FALSE canonical NA NA 376 None 13 1 0 FALSE 0 0 NA A coding 215 645 23 667 PB.7471.4 chr13 - 1503 1 incomplete-splice_match LCP1 ENST00000323076.6 3787 16 2282 3 no_subtype FALSE canonical NA NA NA None 12 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7513.1 chr13 + 2578 16 novel_not_in_catalog TDRD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2320 None 25 4 0 TRUE 0 0 NA B coding 744 2232 77 2308 PB.8200.1 chr15 + 2912 9 novel_not_in_catalog PML novel NA NA NA NA no_subtype FALSE canonical NA NA 1764 None 80 3 1 TRUE 0 0 NA C coding 614 1842 23 1864 PB.6489.2 chr11 + 2631 20 full-splice_match TCIRG1 ENST00000265686.7 2677 20 44 2 no_subtype FALSE canonical NA NA 2478 None 183 1 1 FALSE 0 0 NA C coding 830 2490 65 2554 PB.6489.3 chr11 + 3192 18 novel_in_catalog TCIRG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3039 None 6 6 1 FALSE 0 0 NA C coding 531 1593 1042 2634 PB.6489.4 chr11 + 2840 20 novel_not_in_catalog TCIRG1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2688 None 4 11 2 TRUE 0 0 NA C coding 747 2241 111 2351 PB.6489.5 chr11 + 2890 20 novel_not_in_catalog TCIRG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2739 None 2 34 3 TRUE 0 0 NA C coding 614 1842 974 2815 PB.10411.1 chr20 + 1272 13 full-splice_match DNTTIP1 ENST00000372622.7 1290 13 0 18 no_subtype FALSE canonical NA NA 919 None 4 1 0 FALSE 0 0 NA A coding 329 987 69 1055 PB.6489.7 chr11 + 2732 20 novel_not_in_catalog TCIRG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2579 None 2 9 1 TRUE 0 0 NA C coding 755 2265 80 2344 PB.1218.5 chr2 + 3397 12 incomplete-splice_match NCOA1 ENST00000288599.9 6952 22 1368 2187 internal_fragment FALSE canonical NA NA 3102 None 3 2 1 FALSE 0 0 NA B coding 1019 3057 31 3087 PB.707.11 chr1 - 6359 17 novel_not_in_catalog ADAR novel NA NA NA NA no_subtype FALSE canonical NA NA 194 None 3 23 0 TRUE 0 0 NA B coding 1226 3678 180 3857 PB.11016.1 chrX + 3312 3 full-splice_match FOXO4 ENST00000374259.7 3301 3 -21 10 no_subtype FALSE canonical NA NA 1863 None 7 10 0 FALSE 0 0 NA A coding 505 1515 354 1868 PB.3956.1 chr6 - 1632 12 full-splice_match PLA2G7 ENST00000274793.11 1882 12 -81 331 no_subtype FALSE canonical NA NA 244 None 27 1 0 FALSE 0 0 NA C coding 441 1323 279 1601 PB.10282.1 chr20 + 1436 4 full-splice_match DSTN ENST00000246069.11 3617 4 258 1923 no_subtype FALSE canonical NA NA 476 None 279 8 0 FALSE 0 0 NA A coding 165 495 89 583 PB.707.15 chr1 - 5627 4 novel_in_catalog ADAR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2441 None 2 33 0 FALSE 0 0 NA B coding 255 765 2153 2917 PB.707.16 chr1 - 2617 2 novel_in_catalog ADAR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 215 None 9 7 0 FALSE 0 0 NA B coding 534 1602 201 1802 PB.3743.1 chr6 + 5499 6 incomplete-splice_match HIVEP1 ENST00000379388.6 9027 9 3525 3 internal_fragment FALSE canonical NA NA 3785 None 4 4 0 FALSE 0 0 NA A coding 1615 4845 117 4961 PB.241.1 chr1 + 1384 1 incomplete-splice_match ZNF362 ENST00000373428.5 2936 8 1551 2 no_subtype FALSE canonical NA NA NA None 3 3 0 FALSE 0 0 NA A coding 150 450 382 831 PB.847.3 chr1 + 2948 12 full-splice_match DCAF6 ENST00000470721.5 2803 12 23 -168 no_subtype FALSE canonical NA NA 1717 None 2 15 2 FALSE 0 0 NA C coding 472 1416 217 1632 PB.5554.1 chr9 + 4319 5 novel_not_in_catalog LRRC8A novel NA NA NA NA no_subtype TRUE canonical NA NA 2383 None 2 12 0 TRUE 0 0 NA A coding 810 2430 227 2656 PB.793.5 chr1 - 3239 8 novel_not_in_catalog CD84 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 86 None 4 26 3 TRUE 0 0 NA C coding 313 939 58 996 PB.6298.1 chr11 + 2685 12 full-splice_match CREB3L1 ENST00000621158.4 2687 12 -1 3 no_subtype FALSE canonical NA NA 1975 None 7 3 0 FALSE 0 0 NA C coding 519 1557 453 2009 PB.6506.11 chr11 - 7271 26 novel_in_catalog NUMA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 234 None 6 4 0 FALSE 0 0 NA B coding 2115 6345 267 6611 PB.793.6 chr1 - 6558 5 novel_in_catalog CD84 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 77 None 4 25 0 FALSE 0 0 NA C coding 280 840 32 871 PB.7846.1 chr14 + 1856 3 novel_not_in_catalog GPR65 novel NA NA NA NA no_subtype FALSE canonical NA NA 88 None 8 4 0 TRUE 0 0 NA A coding 337 1011 545 1555 PB.5204.1 chr9 - 3078 1 genic_intron novelGene_27 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 30 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10651.1 chr22 - 3252 1 antisense novelGene_CRKL_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6703.47 chr11 - 3031 1 antisense novelGene_SORL1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6703.45 chr11 + 5957 1 novel_in_catalog SORL1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 29 0 FALSE 0 0 NA B coding 129 387 3660 4046 PB.7465.1 chr13 - 839 6 full-splice_match TPT1 ENST00000530705.5 4735 6 187 3709 no_subtype FALSE canonical NA NA 142 None 49 3 0 FALSE 0 0 NA A coding 172 516 115 630 PB.4044.6 chr6 - 2860 4 novel_not_in_catalog PNISR novel NA NA NA NA no_subtype FALSE canonical NA NA 76 None 4 15 0 TRUE 0 0 NA C coding 101 303 1846 2148 PB.4044.5 chr6 - 1609 1 novel_in_catalog PNISR novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2105.2 chr3 - 3131 5 full-splice_match CSRNP1 ENST00000273153.9 3148 5 14 3 no_subtype TRUE canonical NA NA 124 None 48 8 0 FALSE 0 0 NA A coding 589 1767 165 1931 PB.4044.3 chr6 - 3037 12 novel_not_in_catalog PNISR novel NA NA NA NA no_subtype TRUE canonical NA NA 52 None 2 11 1 TRUE 0 0 NA C coding 250 750 2286 3035 PB.4044.2 chr6 - 2929 13 novel_not_in_catalog PNISR novel NA NA NA NA no_subtype FALSE canonical NA NA 61 None 2 1 0 FALSE 0 0 NA C coding 814 2442 173 2614 PB.4044.1 chr6 - 1689 12 full-splice_match PNISR ENST00000369239.9 5112 12 -7 3430 no_subtype FALSE canonical NA NA 101 None 32 0 0 FALSE 0 0 NA C coding 492 1476 213 1688 PB.4521.1 chr7 + 3701 2 antisense novelGene_SLC25A13_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 255 None 3 20 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5688.1 chr10 + 1749 14 full-splice_match HSPA14 ENST00000378372.7 1904 14 152 3 no_subtype TRUE canonical NA NA 1538 None 6 0 0 FALSE 0 0 NA A coding 509 1527 88 1614 PB.3638.1 chr5 - 2952 1 genic_intron novelGene_1303 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.113 chr14 - 1501 8 fusion IGHA1,IGHV1-3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 100 None 2 17 2 TRUE 0 0 NA B coding 254 762 695 1456 PB.374.1 chr1 + 2998 11 full-splice_match PODN ENST00000312553.9 3010 11 1 11 no_subtype FALSE canonical NA NA 2019 None 33 11 0 FALSE 0 0 NA A coding 613 1839 151 1989 PB.10419.1 chr20 - 4436 28 novel_not_in_catalog ZNF335 novel NA NA NA NA no_subtype TRUE canonical NA NA 64 None 4 2 0 FALSE 0 0 NA A coding 1341 4023 115 4137 PB.9156.1 chr17 - 2664 3 full-splice_match MEOX1 ENST00000318579.8 2707 3 32 11 no_subtype FALSE canonical NA NA 857 None 3 6 0 FALSE 0 0 NA A coding 254 762 389 1150 PB.8246.1 chr15 + 1337 3 full-splice_match TMED3 ENST00000299705.9 1475 3 125 13 no_subtype FALSE canonical NA NA 480 None 27 5 0 FALSE 0 0 NA A coding 217 651 64 714 PB.6007.1 chr10 + 3245 11 full-splice_match TAF5 ENST00000369839.3 3268 11 12 11 no_subtype FALSE canonical NA NA 2196 None 7 9 1 FALSE 0 0 NA A coding 800 2400 12 2411 PB.10316.3 chr20 + 3724 18 novel_not_in_catalog TM9SF4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1765 None 6 10 0 TRUE 0 0 NA B coding 625 1875 38 1912 PB.10290.2 chr20 + 3004 4 genic_intron novelGene_185 novel NA NA NA NA no_subtype FALSE canonical NA NA 302 None 3 17 3 FALSE 0 0 NA B coding 153 459 2017 2475 PB.9575.1 chr18 + 7173 28 novel_not_in_catalog WDR7 novel NA NA NA NA no_subtype FALSE canonical NA NA 4390 None 4 9 1 TRUE 0 0 NA A coding 1457 4371 221 4591 PB.6290.5 chr11 + 2771 8 novel_not_in_catalog CD82 novel NA NA NA NA no_subtype FALSE canonical NA NA 480 None 2 17 0 TRUE 0 0 NA B coding 182 546 145 690 PB.6290.6 chr11 + 2761 2 genic CD82 novel NA NA NA NA no_subtype FALSE canonical NA NA 1463 None 2 20 1 TRUE 0 0 NA B coding 147 441 6 446 PB.5513.1 chr9 + 2828 2 full-splice_match ZBTB43 ENST00000450858.1 710 2 0 -2118 no_subtype FALSE canonical NA NA 100 None 7 5 0 FALSE 0 0 NA C coding 467 1401 124 1524 PB.6290.1 chr11 + 1895 12 novel_not_in_catalog CD82 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1344 None 53 9 1 TRUE 0 0 NA B coding 267 801 175 975 PB.6290.2 chr11 + 2011 12 novel_not_in_catalog CD82 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1462 None 3 13 1 TRUE 0 0 NA B coding 267 801 293 1093 PB.6290.3 chr11 + 2014 12 novel_not_in_catalog CD82 novel NA NA NA NA no_subtype FALSE canonical NA NA 1462 None 6 11 1 TRUE 0 0 NA B coding 267 801 304 1104 PB.9509.1 chr18 + 3830 2 genic_intron novelGene_212 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 474 None 2 30 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8145.1 chr15 - 2931 13 full-splice_match CSNK1G1 ENST00000634654.1 2485 13 -92 -354 no_subtype FALSE canonical NA NA 176 None 2 8 0 FALSE 0 0 NA C coding 442 1326 452 1777 PB.2471.2 chr3 - 1635 15 novel_not_in_catalog MRPL3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 231 None 2 8 3 TRUE 0 0 NA B coding 348 1044 140 1183 PB.10976.1 chrX - 2870 1 antisense novelGene_CLCN5_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 79 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.394.1 chr1 + 1572 2 genic GYG1P3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 696 None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8058.1 chr15 + 2783 3 novel_not_in_catalog B2M novel NA NA NA NA no_subtype FALSE canonical NA NA 2454 None 103 16 0 FALSE 0 0 NA C coding 122 366 19 384 PB.8058.2 chr15 + 901 5 novel_not_in_catalog B2M novel NA NA NA NA no_subtype FALSE canonical NA NA 568 None 647 5 0 FALSE 0 0 NA C coding 119 357 10 366 PB.8058.3 chr15 + 1379 2 novel_not_in_catalog B2M novel NA NA NA NA no_subtype FALSE canonical NA NA 1332 None 2 13 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.8058.4 chr15 + 1543 4 novel_not_in_catalog B2M novel NA NA NA NA no_subtype FALSE canonical NA NA 1204 None 9 9 0 FALSE 0 0 NA C coding 122 366 19 384 PB.8058.5 chr15 + 1051 1 full-splice_match B2M ENST00000632133.1 2403 1 -828 2180 no_subtype FALSE canonical NA NA NA None 137 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8058.6 chr15 + 3219 4 novel_not_in_catalog B2M novel NA NA NA NA no_subtype FALSE canonical NA NA 1827 None 12 20 0 FALSE 0 0 NA C coding 119 357 19 375 PB.8058.7 chr15 + 1858 2 novel_not_in_catalog B2M novel NA NA NA NA no_subtype FALSE canonical NA NA 1529 None 5 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3687.1 chr5 + 2887 7 novel_in_catalog ZNF354B novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2374 None 2 13 0 FALSE 0 0 NA A coding 612 1836 189 2024 PB.2642.5 chr3 + 3085 17 novel_not_in_catalog SENP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1782 None 2 8 0 TRUE 0 0 NA C coding 509 1527 316 1842 PB.1222.4 chr2 - 7175 16 novel_not_in_catalog ASXL2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 322 None 5 17 2 TRUE 0 0 NA B coding 1435 4305 266 4570 PB.1222.5 chr2 - 4270 4 genic_intron novelGene_251 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 425 None 2 41 3 FALSE 0 0 NA A coding 67 201 154 354 PB.6902.2 chr12 - 2875 13 full-splice_match PKP2 ENST00000340811.8 4302 13 73 1354 no_subtype FALSE canonical NA NA 259 None 32 0 0 FALSE 0 0 NA A coding 837 2511 37 2547 PB.1222.3 chr2 - 6769 13 novel_not_in_catalog ASXL2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 108 None 2 16 2 TRUE 0 0 NA B coding 1377 4131 31 4161 PB.1590.1 chr2 - 2985 1 full-splice_match WTH3DI ENST00000623617.2 3032 1 -18 65 no_subtype FALSE canonical NA NA NA None 128 20 0 FALSE 0 0 NA A coding 254 762 441 1202 PB.9992.12 chr19 - 4304 12 novel_not_in_catalog FCGBP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 59 None 4 5 0 TRUE 0 0 NA B coding 1147 3441 700 4140 PB.9992.13 chr19 - 3817 10 novel_not_in_catalog FCGBP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 113 None 10 0 0 TRUE 0 0 NA B coding 1093 3279 376 3654 PB.9992.10 chr19 - 4757 13 incomplete-splice_match FCGBP ENST00000616721.4 12787 28 8027 3 5prime_fragment FALSE canonical NA NA 169 None 17 0 0 FALSE 0 0 NA B coding 1474 4422 172 4593 PB.9992.11 chr19 - 4042 11 novel_not_in_catalog FCGBP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 134 None 4 2 0 TRUE 0 0 NA B coding 1186 3558 321 3878 PB.9992.16 chr19 - 4349 12 novel_not_in_catalog FCGBP novel NA NA NA NA no_subtype TRUE canonical NA NA 113 None 36 0 0 TRUE 0 0 NA B coding 1186 3558 638 4195 PB.2642.7 chr3 + 1563 1 genic_intron novelGene_1349 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9992.14 chr19 - 4057 11 novel_not_in_catalog FCGBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 141 None 5 3 1 TRUE 0 0 NA B coding 1189 3567 328 3894 PB.2968.1 chr4 - 1495 9 full-splice_match ADH5 ENST00000296412.12 2615 9 -54 1174 no_subtype FALSE canonical NA NA 117 None 77 4 0 FALSE 0 0 NA A coding 374 1122 106 1227 PB.5239.2 chr9 + 5766 43 novel_not_in_catalog FOCAD novel NA NA NA NA no_subtype FALSE canonical NA NA 5369 None 2 4 1 FALSE 0 0 NA B coding 1380 4140 34 4173 PB.6601.2 chr11 - 3271 15 full-splice_match MTMR2 ENST00000346299.9 4681 15 189 1221 no_subtype FALSE canonical NA NA 232 None 22 8 0 FALSE 0 0 NA C coding 643 1929 153 2081 PB.9937.1 chr19 + 1609 7 novel_in_catalog MAG novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1101 None 5 5 0 FALSE 0 0 NA A coding 338 1014 73 1086 PB.5239.1 chr9 + 5803 45 novel_not_in_catalog FOCAD novel NA NA NA NA no_subtype TRUE canonical NA NA 5421 None 7 1 1 TRUE 0 0 NA B coding 1380 4140 86 4225 PB.879.2 chr1 - 2750 1 antisense novelGene_RABGAP1L_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.879.1 chr1 - 3021 2 antisense novelGene_RABGAP1L_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2494 None 53 20 1 FALSE 0 0 NA B coding 99 297 1636 1932 PB.6123.1 chr11 - 1374 13 full-splice_match CHID1 ENST00000323578.12 3374 13 630 1370 no_subtype FALSE canonical NA NA 57 None 9 0 0 FALSE 0 0 NA A coding 393 1179 101 1279 PB.8403.1 chr16 - 6377 21 novel_not_in_catalog NLRC3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 245 None 2 31 2 TRUE 0 0 NA B coding 1065 3195 414 3608 PB.8403.2 chr16 - 6446 22 novel_not_in_catalog NLRC3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 248 None 3 34 2 TRUE 0 0 NA B coding 1065 3195 483 3677 PB.8403.3 chr16 - 6413 22 novel_not_in_catalog NLRC3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 225 None 2 61 2 TRUE 0 0 NA B coding 1065 3195 456 3650 PB.449.5 chr1 + 2783 1 incomplete-splice_match PRKACB ENST00000394839.6 4200 11 1408 10 no_subtype FALSE canonical NA NA NA None 6 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6601.1 chr11 - 3314 16 full-splice_match MTMR2 ENST00000352297.11 3350 16 1 35 no_subtype FALSE canonical NA NA 225 None 12 15 3 FALSE 0 0 NA C coding 571 1713 433 2145 PB.449.3 chr1 + 4301 9 novel_in_catalog PRKACB novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 986 None 2 13 0 FALSE 0 0 NA C coding 357 1071 39 1109 PB.449.2 chr1 + 4091 10 full-splice_match PRKACB ENST00000370685.7 4481 10 41 349 no_subtype FALSE canonical NA NA 1121 None 46 7 0 FALSE 0 0 NA C coding 398 1194 51 1244 PB.449.1 chr1 + 4510 10 full-splice_match PRKACB ENST00000370689.6 4513 10 -7 10 no_subtype FALSE canonical NA NA 1201 None 2 12 0 FALSE 0 0 NA C coding 351 1053 272 1324 PB.3046.1 chr4 + 1958 15 incomplete-splice_match NAA15 ENST00000398947.1 6072 20 51 4063 3prime_fragment FALSE canonical NA NA 1892 None 7 0 0 FALSE 0 0 NA C coding 606 1818 140 1957 PB.7863.3 chr14 - 2015 12 full-splice_match TC2N ENST00000360594.9 3751 12 -127 1863 no_subtype FALSE canonical NA NA 204 None 2 6 0 FALSE 0 0 NA C coding 490 1470 261 1730 PB.4535.3 chr7 + 3004 3 novel_in_catalog ZNF655 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2164 None 3 4 0 FALSE 0 0 NA C coding 131 393 1966 2358 PB.4535.1 chr7 + 1777 4 full-splice_match ZNF655 ENST00000467680.5 1979 4 199 3 no_subtype FALSE canonical NA NA 937 None 2 2 0 FALSE 0 0 NA C coding 131 393 739 1131 PB.11146.1 chrX - 3732 25 full-splice_match SMARCA1 ENST00000371121.4 3564 25 -85 -83 no_subtype FALSE canonical NA NA 294 None 3 1 0 FALSE 0 0 NA A coding 1070 3210 121 3330 PB.2201.2 chr3 + 999 2 full-splice_match FAM212A ENST00000333323.4 1040 2 35 6 no_subtype FALSE canonical NA NA 155 None 4 1 0 FALSE 0 0 NA A coding 287 861 99 959 PB.2654.7 chr3 + 3568 8 novel_in_catalog EIF4A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 805 None 2 22 0 FALSE 0 0 NA C coding 314 942 35 976 PB.8935.1 chr17 + 2879 7 full-splice_match COX10 ENST00000261643.7 2873 7 -5 -1 no_subtype FALSE canonical NA NA 1010 None 51 12 0 FALSE 0 0 NA A coding 443 1329 83 1411 PB.4993.1 chr8 - 639 4 full-splice_match FABP4 ENST00000256104.4 941 4 30 272 no_subtype FALSE canonical NA NA 139 None 11 1 0 FALSE 0 0 NA A coding 132 396 67 462 PB.10311.1 chr20 + 3835 1 genic_intron novelGene_307 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7531.12 chr13 - 5604 31 novel_not_in_catalog MYCBP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 2 8 0 TRUE 0 0 NA B coding 1713 5139 466 5604 PB.2566.2 chr3 - 1216 8 novel_not_in_catalog PDCD10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 71 None 2 3 0 TRUE 0 0 NA C coding 210 630 187 816 PB.5374.2 chr9 + 5466 16 novel_in_catalog FGD3 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 4558 None 8 17 0 FALSE 0 0 NA C coding 458 1374 563 1936 PB.7206.8 chr12 + 2751 1 genic_intron novelGene_947 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA B coding 135 405 2078 2482 PB.7206.9 chr12 + 3626 2 genic_intron novelGene_948 novel NA NA NA NA no_subtype TRUE canonical NA NA 2193 None 12 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3999.1 chr6 - 3070 1 genic_intron novelGene_709 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 30 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7206.7 chr12 + 6188 2 genic_intron novelGene_947 novel NA NA NA NA no_subtype FALSE canonical NA NA 415 None 2 33 0 FALSE 0 0 NA B coding 135 405 5515 5919 PB.7206.4 chr12 + 3125 1 novel_in_catalog CHST11 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 14 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7206.5 chr12 + 3119 2 novel_not_in_catalog CHST11 novel NA NA NA NA no_subtype FALSE canonical NA NA 2497 None 2 16 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.7206.2 chr12 + 2546 3 genic_intron novelGene_946 novel NA NA NA NA no_subtype FALSE canonical NA NA 1413 None 6 13 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.8623.1 chr16 - 2720 17 full-splice_match BBS2 ENST00000245157.9 2963 17 235 8 no_subtype FALSE canonical NA NA 303 None 17 3 0 FALSE 0 0 NA A coding 721 2163 187 2349 PB.455.2 chr1 - 2665 14 novel_not_in_catalog MCOLN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 263 None 33 8 1 FALSE 0 0 NA B coding 253 759 187 945 PB.7206.1 chr12 + 1612 3 full-splice_match CHST11 ENST00000303694.5 5709 3 189 3908 no_subtype FALSE canonical NA NA 454 None 2 1 0 FALSE 0 0 NA C coding 352 1056 251 1306 PB.11161.1 chrX + 4410 11 full-splice_match PHF6 ENST00000370803.7 4489 11 72 7 no_subtype FALSE canonical NA NA 1287 None 4 7 0 FALSE 0 0 NA C coding 365 1095 190 1284 PB.11161.2 chrX + 2559 11 novel_not_in_catalog PHF6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1273 None 5 3 0 FALSE 0 0 NA C coding 365 1095 176 1270 PB.2560.1 chr3 + 4206 1 antisense novelGene_KPNA4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 42 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3759.2 chr6 - 2869 2 incomplete-splice_match ATXN1 ENST00000436367.5 10587 8 1702 6016 5prime_fragment FALSE canonical NA NA 1137 None 2 13 0 FALSE 0 0 NA B coding 540 1620 46 1665 PB.10194.2 chr19 + 2907 4 novel_not_in_catalog ZNF587 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2436 None 10 19 1 TRUE 0 0 NA A coding 575 1725 127 1851 PB.7190.1 chr12 + 3080 11 novel_in_catalog GAS2L3 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 1092 None 2 7 0 FALSE 0 0 NA A coding 694 2082 337 2418 PB.1780.2 chr2 + 2803 9 novel_not_in_catalog MOB4 novel NA NA NA NA no_subtype FALSE canonical NA NA 681 None 2 13 1 TRUE 0 0 NA C coding 226 678 15 692 PB.6592.4 chr11 - 3903 15 novel_not_in_catalog MRE11A novel NA NA NA NA no_subtype FALSE canonical NA NA 53 None 3 10 0 TRUE 0 0 NA B coding 539 1617 159 1775 PB.2444.1 chr3 - 2514 14 full-splice_match SNX4 ENST00000251775.8 2513 14 -4 3 no_subtype FALSE canonical NA NA 170 None 2 6 0 FALSE 0 0 NA C coding 450 1350 30 1379 PB.6592.1 chr11 - 2613 21 novel_not_in_catalog MRE11A novel NA NA NA NA no_subtype FALSE canonical NA NA 151 None 9 4 0 TRUE 0 0 NA B coding 708 2124 257 2380 PB.10319.1 chr20 + 1587 7 full-splice_match POFUT1 ENST00000375749.7 5235 7 19 3629 no_subtype FALSE canonical NA NA 1021 None 2 1 0 FALSE 0 0 NA C coding 388 1164 44 1207 PB.10319.2 chr20 + 4592 8 novel_not_in_catalog POFUT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3176 None 4 17 1 TRUE 0 0 NA C coding 388 1164 44 1207 PB.8155.1 chr15 - 3914 9 full-splice_match CILP ENST00000261883.5 5695 9 19 1762 no_subtype FALSE canonical NA NA 42 None 38 4 0 FALSE 0 0 NA A coding 1184 3552 149 3700 PB.1889.1 chr2 - 3238 2 full-splice_match FAM124B ENST00000409685.3 2509 2 -16 -713 no_subtype FALSE canonical NA NA 1014 None 2 10 0 FALSE 0 0 NA A coding 455 1365 283 1647 PB.8972.1 chr17 + 2717 3 genic_intron novelGene_177 novel NA NA NA NA no_subtype FALSE canonical NA NA 1625 None 15 15 2 FALSE 0 0 NA A coding 154 462 1610 2071 PB.9927.1 chr19 + 3286 7 novel_not_in_catalog ZNF302 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3007 None 2 29 3 TRUE 0 0 NA A coding 329 987 452 1438 PB.327.1 chr1 + 1459 10 full-splice_match DMAP1 ENST00000372289.6 1730 10 257 14 no_subtype FALSE canonical NA NA 1350 None 27 0 0 FALSE 0 0 NA A coding 467 1401 7 1407 PB.8810.1 chr16 - 2004 1 incomplete-splice_match ANKRD11 ENST00000562275.5 2762 6 756 3 no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10218.1 chr20 - 2523 2 full-splice_match SRXN1 ENST00000381962.3 2698 2 158 17 no_subtype FALSE canonical NA NA 237 None 4 8 0 FALSE 0 0 NA A coding 137 411 28 438 PB.423.4 chr1 - 1385 8 full-splice_match SERBP1 ENST00000370995.6 3482 8 -1 2098 no_subtype FALSE canonical NA NA 400 None 3 1 0 FALSE 0 0 NA C coding 408 1224 88 1311 PB.6435.1 chr11 + 1218 1 full-splice_match MALAT1 ENST00000534336.1 8708 1 3841 3649 no_subtype FALSE canonical NA NA NA None 134 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.946.8 chr1 + 2626 8 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 373 None 4 10 1 TRUE 0 0 NA B coding 112 336 193 528 PB.10129.2 chr19 + 1692 9 full-splice_match NR1H2 ENST00000411902.6 1466 9 14 -240 no_subtype FALSE canonical NA NA 1176 None 2 4 0 FALSE 0 0 NA C coding 363 1089 232 1320 PB.946.5 chr1 + 2967 29 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2922 None 59 5 1 TRUE 0 0 NA B coding 925 2775 193 2967 PB.946.4 chr1 + 2850 26 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2804 None 5 8 3 TRUE 0 0 NA B coding 909 2727 123 2849 PB.1908.3 chr2 + 2959 26 novel_not_in_catalog SP100 novel NA NA NA NA no_subtype FALSE canonical NA NA 2050 None 3 6 0 TRUE 0 0 NA B coding 832 2496 92 2587 PB.7354.1 chr12 + 2074 4 full-splice_match TMED2 ENST00000262225.7 2560 4 43 443 no_subtype FALSE canonical NA NA 544 None 85 6 0 FALSE 0 0 NA A coding 201 603 64 666 PB.946.1 chr1 + 2822 28 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2777 None 10 8 2 TRUE 0 0 NA B coding 877 2631 192 2822 PB.10129.1 chr19 + 1970 10 full-splice_match NR1H2 ENST00000253727.9 1998 10 17 11 no_subtype FALSE canonical NA NA 1454 None 91 4 0 FALSE 0 0 NA C coding 460 1380 219 1598 PB.946.3 chr1 + 4477 33 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3389 None 6 13 0 TRUE 0 0 NA B coding 1192 3576 87 3662 PB.946.2 chr1 + 2605 27 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2566 None 132 5 0 TRUE 0 0 NA B coding 848 2544 62 2605 PB.7352.1 chr12 - 5695 33 novel_not_in_catalog SBNO1 novel NA NA NA NA no_subtype TRUE canonical NA NA 146 None 2 13 0 TRUE 0 0 NA B coding 1393 4179 147 4325 PB.5983.14 chr10 - 1959 8 novel_in_catalog MGEA5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 619 None 2 2 0 FALSE 0 0 NA C coding 334 1002 748 1749 PB.1845.26 chr2 - 5714 31 novel_in_catalog FN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 413 None 19 5 0 FALSE 0 0 NA C coding 1632 4896 266 5161 PB.9139.16 chr17 + 2066 7 novel_in_catalog MLX novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 903 None 2 13 0 FALSE 0 0 NA C coding 192 576 23 598 PB.1845.22 chr2 - 3357 20 novel_not_in_catalog FN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 264 None 2 13 1 TRUE 0 0 NA C coding 566 1698 970 2667 PB.9903.1 chr19 - 1772 3 full-splice_match LPAR2 ENST00000407877.7 1791 3 18 1 no_subtype FALSE canonical NA NA 130 None 5 3 0 FALSE 0 0 NA A coding 351 1053 131 1183 PB.4515.1 chr7 + 3570 31 novel_not_in_catalog VPS50 novel NA NA NA NA no_subtype TRUE canonical NA NA 2867 None 23 3 0 TRUE 0 0 NA A coding 964 2892 93 2984 PB.8582.1 chr16 - 2767 14 novel_not_in_catalog C16orf58 novel NA NA NA NA no_subtype FALSE canonical NA NA 324 None 25 3 0 TRUE 0 0 NA A coding 468 1404 25 1428 PB.7550.2 chr13 + 1983 1 genic_intron novelGene_892 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11095.1 chrX + 2902 7 full-splice_match PLP1 ENST00000619236.1 2896 7 -10 4 no_subtype FALSE canonical NA NA 813 None 9 4 0 FALSE 0 0 NA A coding 242 726 157 882 PB.6941.1 chr12 + 2610 13 full-splice_match CACNB3 ENST00000536187.6 1872 13 -17 -721 no_subtype FALSE canonical NA NA 1254 None 5 2 0 FALSE 0 0 NA C coding 483 1449 118 1566 PB.6305.3 chr11 - 6662 44 novel_in_catalog CKAP5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 70 None 2 6 1 FALSE 0 0 NA C coding 2032 6096 88 6183 PB.4113.4 chr6 + 3024 6 full-splice_match NCOA7 ENST00000438495.6 3133 6 103 6 no_subtype FALSE canonical NA NA 554 None 7 12 0 FALSE 0 0 NA C coding 219 657 31 687 PB.6305.1 chr11 - 6694 44 full-splice_match CKAP5 ENST00000529230.5 7121 44 -63 490 no_subtype TRUE canonical NA NA 73 None 10 3 0 FALSE 0 0 NA C coding 2032 6096 111 6206 PB.2444.3 chr3 - 1495 4 genic_intron novelGene_1090 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 223 None 3 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1179.1 chr2 + 1150 3 full-splice_match ID2 ENST00000396290.1 1362 3 75 137 no_subtype FALSE canonical NA NA 520 None 15 3 0 FALSE 0 0 NA C coding 134 402 109 510 PB.1179.2 chr2 + 1748 1 novel_in_catalog ID2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA C coding 141 423 111 533 PB.5983.12 chr10 - 2833 7 novel_not_in_catalog MGEA5 novel NA NA NA NA no_subtype FALSE canonical NA NA 155 None 3 12 0 TRUE 0 0 NA C coding 498 1494 41 1534 PB.1791.1 chr2 - 2621 7 full-splice_match KCTD18 ENST00000409157.5 2556 7 -72 7 no_subtype FALSE canonical NA NA 130 None 2 6 0 FALSE 0 0 NA A coding 426 1278 206 1483 PB.3120.9 chr4 - 3533 1 genic_intron novelGene_1294 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A coding 99 297 2244 2540 PB.10663.1 chr22 - 673 4 full-splice_match CHCHD10 ENST00000484558.2 1171 4 492 6 no_subtype FALSE canonical NA NA 118 None 3 1 0 FALSE 0 0 NA A coding 142 426 78 503 PB.2990.1 chr4 - 1549 7 full-splice_match INTS12 ENST00000451321.6 1975 7 419 7 no_subtype FALSE canonical NA NA 52 None 5 1 0 FALSE 0 0 NA A coding 462 1386 62 1447 PB.5192.22 chr9 + 6179 9 novel_in_catalog DOCK8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5086 None 2 29 0 FALSE 0 0 NA B coding 310 930 4215 5144 PB.5192.20 chr9 + 2663 4 genic DOCK8 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2583 None 2 22 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.1517.3 chr2 - 1995 7 full-splice_match RNF149 ENST00000295317.3 2458 7 6 457 no_subtype FALSE canonical NA NA 562 None 12 9 0 FALSE 0 0 NA C coding 400 1200 103 1302 PB.9412.1 chr17 - 3345 6 novel_not_in_catalog TIMP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 126 None 2 11 0 TRUE 0 0 NA A coding 143 429 228 656 PB.2544.1 chr3 + 5652 25 novel_not_in_catalog MME novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5139 None 2 16 0 TRUE 0 0 NA B coding 750 2250 174 2423 PB.2544.2 chr3 + 3525 24 novel_not_in_catalog MME novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2294 None 5 2 0 FALSE 0 0 NA B coding 750 2250 142 2391 PB.7013.9 chr12 + 5936 20 novel_not_in_catalog NCKAP1L novel NA NA NA NA no_subtype FALSE canonical NA NA 2173 None 2 12 1 FALSE 0 0 NA B coding 756 2268 14 2281 PB.1487.3 chr2 + 2089 6 novel_in_catalog ARID5A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 567 None 2 4 0 FALSE 0 0 NA C coding 526 1578 202 1779 PB.1487.2 chr2 + 2135 7 full-splice_match ARID5A ENST00000357485.7 2188 7 33 20 no_subtype FALSE canonical NA NA 615 None 6 3 0 FALSE 0 0 NA C coding 594 1782 46 1827 PB.1487.1 chr2 + 2545 6 novel_in_catalog ARID5A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1025 None 2 9 0 FALSE 0 0 NA C coding 430 1290 948 2237 PB.7013.2 chr12 + 3857 32 novel_not_in_catalog NCKAP1L novel NA NA NA NA no_subtype FALSE canonical NA NA 3327 None 2 3 1 TRUE 0 0 NA B coding 782 2346 1090 3435 PB.2444.2 chr3 - 2505 15 novel_not_in_catalog SNX4 novel NA NA NA NA no_subtype TRUE canonical NA NA 171 None 19 4 0 TRUE 0 0 NA C coding 450 1350 31 1380 PB.7013.1 chr12 + 3751 32 novel_not_in_catalog NCKAP1L novel NA NA NA NA no_subtype FALSE canonical NA NA 3229 None 176 1 0 TRUE 0 0 NA B coding 1099 3297 41 3337 PB.2580.1 chr3 - 1751 1 genic_intron novelGene_1307 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8908.1 chr17 - 2542 11 full-splice_match TP53 ENST00000269305.8 2579 11 13 24 no_subtype FALSE canonical NA NA 149 None 7 11 1 FALSE 0 0 NA A coding 393 1179 178 1356 PB.1506.2 chr2 + 3118 21 incomplete-splice_match EIF5B ENST00000289371.10 5777 24 1104 1555 internal_fragment FALSE canonical NA NA 2653 None 2 6 1 FALSE 0 0 NA B coding 877 2631 128 2758 PB.6226.1 chr11 + 4223 1 antisense novelGene_USH1C_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 36 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7702.1 chr14 + 1004 8 full-splice_match C14orf166 ENST00000261700.7 7075 8 71 6000 no_subtype FALSE canonical NA NA 674 None 5 2 0 FALSE 0 0 NA A coding 244 732 95 826 PB.10990.1 chrX - 5848 22 full-splice_match PHF8 ENST00000338154.10 6062 22 205 9 no_subtype FALSE canonical NA NA 208 None 13 9 0 FALSE 0 0 NA C coding 1024 3072 301 3372 PB.4487.1 chr7 + 3039 12 novel_in_catalog DMTF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1331 None 2 16 0 FALSE 0 0 NA B coding 407 1221 283 1503 PB.4487.2 chr7 + 3684 19 novel_not_in_catalog DMTF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2925 None 12 9 1 TRUE 0 0 NA B coding 760 2280 235 2514 PB.4487.3 chr7 + 3852 19 novel_not_in_catalog DMTF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3097 None 2 9 1 TRUE 0 0 NA B coding 494 1482 1205 2686 PB.4487.4 chr7 + 3764 19 novel_not_in_catalog DMTF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3033 None 2 19 2 TRUE 0 0 NA B coding 494 1482 1141 2622 PB.4487.5 chr7 + 2995 1 novel_in_catalog DMTF1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4487.6 chr7 + 5454 2 novel_in_catalog DMTF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 144 None 2 38 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4487.7 chr7 + 2833 7 novel_not_in_catalog DMTF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2078 None 2 17 1 TRUE 0 0 NA B coding 398 1194 474 1667 PB.2063.2 chr3 + 3217 1 genic_intron novelGene_281 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8210.1 chr15 + 1798 1 novel_in_catalog PPCDC novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A coding 164 492 123 614 PB.8989.1 chr17 + 5836 3 genic AC015688.3 novel NA NA NA NA no_subtype FALSE canonical NA NA 4772 None 2 30 2 TRUE 0 0 NA A coding 258 774 4390 5163 PB.3587.5 chr5 - 2862 20 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 167 None 3 14 2 TRUE 0 0 NA B coding 636 1908 191 2098 PB.3587.6 chr5 - 2833 20 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 186 None 6 8 2 TRUE 0 0 NA B coding 624 1872 223 2094 PB.8248.1 chr15 + 1634 6 novel_not_in_catalog ZFAND6 novel NA NA NA NA no_subtype FALSE canonical NA NA 737 None 3 4 0 FALSE 0 0 NA C coding 208 624 260 883 PB.3587.1 chr5 - 2850 19 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 131 None 2 5 1 TRUE 0 0 NA B coding 617 1851 168 2018 PB.5967.6 chr10 - 2918 13 novel_not_in_catalog ERLIN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 171 None 40 11 0 TRUE 0 0 NA B coding 346 1038 189 1226 PB.3587.3 chr5 - 2791 19 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 89 None 219 7 1 TRUE 0 0 NA B coding 636 1908 126 2033 PB.2364.1 chr3 + 4163 1 genic_intron novelGene_989 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 42 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3587.9 chr5 - 2595 18 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 63 None 5 4 0 TRUE 0 0 NA B coding 583 1749 87 1835 PB.4642.1 chr7 + 1026 6 full-splice_match ARF5 ENST00000000233.9 1103 6 68 9 no_subtype FALSE canonical NA NA 542 None 4 3 0 FALSE 0 0 NA A coding 180 540 87 626 PB.6830.1 chr12 + 3655 1 genic_intron novelGene_96 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.340.1 chr1 + 1611 7 novel_not_in_catalog AKR1A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1175 None 3 8 1 TRUE 0 0 NA C coding 119 357 109 465 PB.964.4 chr1 - 2598 10 novel_not_in_catalog PTPN7 novel NA NA NA NA no_subtype FALSE canonical NA NA 46 None 3 5 0 TRUE 0 0 NA B coding 302 906 99 1004 PB.340.3 chr1 + 1187 9 full-splice_match AKR1A1 ENST00000351829.8 1166 9 -24 3 no_subtype FALSE canonical NA NA 1031 None 4 0 0 FALSE 0 0 NA C coding 325 975 120 1094 PB.340.2 chr1 + 1218 10 novel_not_in_catalog AKR1A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1061 None 2 0 0 TRUE 0 0 NA C coding 325 975 150 1124 PB.964.1 chr1 - 2899 11 novel_not_in_catalog PTPN7 novel NA NA NA NA no_subtype FALSE canonical NA NA 58 None 14 11 0 TRUE 0 0 NA B coding 399 1197 128 1324 PB.964.3 chr1 - 2765 11 novel_not_in_catalog PTPN7 novel NA NA NA NA no_subtype FALSE canonical NA NA 58 None 52 5 0 TRUE 0 0 NA B coding 360 1080 111 1190 PB.8397.1 chr16 - 5534 10 novel_not_in_catalog MEFV novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2048 None 4 29 0 TRUE 0 0 NA B coding 481 1443 2742 4184 PB.5410.1 chr9 + 3253 3 genic ZNF189 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3188 None 2 29 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.8397.3 chr16 - 5527 11 novel_not_in_catalog MEFV novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2082 None 2 27 1 TRUE 0 0 NA B coding 481 1443 2776 4218 PB.8397.5 chr16 - 1141 2 novel_in_catalog MEFV novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 337 None 6 6 0 FALSE 0 0 NA B coding 324 972 61 1032 PB.1162.4 chr1 - 3160 6 novel_not_in_catalog ZNF669 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 140 None 2 32 1 TRUE 0 0 NA B coding 341 1023 188 1210 PB.3076.1 chr4 - 1478 1 antisense novelGene_ARHGAP10_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8774.5 chr16 - 4251 23 full-splice_match MBTPS1 ENST00000343411.7 4338 23 78 9 no_subtype FALSE canonical NA NA 94 None 59 6 0 FALSE 0 0 NA C coding 1052 3156 419 3574 PB.8774.6 chr16 - 2889 17 incomplete-splice_match MBTPS1 ENST00000343411.7 4338 23 1438 11 5prime_fragment FALSE canonical NA NA 21 None 2 5 0 FALSE 0 0 NA C coding 721 2163 52 2214 PB.6086.6 chr10 + 2751 1 genic PTPRE novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3595.11 chr5 + 4552 1 incomplete-splice_match G3BP1 ENST00000394123.7 10240 12 4245 1444 no_subtype FALSE canonical NA NA NA None 8 32 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6086.4 chr10 + 3402 20 novel_not_in_catalog PTPRE novel NA NA NA NA no_subtype FALSE canonical NA NA 1999 None 2 8 1 TRUE 0 0 NA B coding 642 1926 37 1962 PB.6086.3 chr10 + 2243 19 novel_not_in_catalog PTPRE novel NA NA NA NA no_subtype FALSE canonical NA NA 1938 None 2 2 0 FALSE 0 0 NA B coding 642 1926 85 2010 PB.6086.2 chr10 + 3534 20 novel_not_in_catalog PTPRE novel NA NA NA NA no_subtype FALSE canonical NA NA 2067 None 19 8 1 TRUE 0 0 NA B coding 642 1926 105 2030 PB.6086.1 chr10 + 3356 21 novel_not_in_catalog PTPRE novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2148 None 2 6 0 TRUE 0 0 NA B coding 700 2100 121 2220 PB.1681.2 chr2 - 2817 14 novel_not_in_catalog FASTKD1 novel NA NA NA NA no_subtype TRUE canonical NA NA 179 None 2 7 1 FALSE 0 0 NA B coding 631 1893 842 2734 PB.9824.32 chr19 + 2894 18 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2268 None 7 14 1 FALSE 0 0 NA C coding 577 1731 565 2295 PB.9824.33 chr19 + 2976 20 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2350 None 3 7 0 TRUE 0 0 NA C coding 560 1680 81 1760 PB.9824.30 chr19 + 2957 19 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2331 None 2 17 1 TRUE 0 0 NA C coding 612 1836 81 1916 PB.9824.31 chr19 + 2981 20 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2353 None 3 13 3 TRUE 0 0 NA C coding 577 1731 650 2380 PB.9824.36 chr19 + 3101 20 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2477 None 20 6 0 TRUE 0 0 NA C coding 808 2424 81 2504 PB.9824.37 chr19 + 2803 18 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2175 None 2 7 0 TRUE 0 0 NA C coding 522 1566 80 1645 PB.9824.34 chr19 + 3037 19 full-splice_match ADGRE5 ENST00000357355.7 3054 19 9 8 no_subtype FALSE canonical NA NA 2411 None 60 6 0 FALSE 0 0 NA C coding 786 2358 81 2438 PB.9824.35 chr19 + 3623 19 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2995 None 15 9 0 FALSE 0 0 NA C coding 578 1734 1289 3022 PB.9589.1 chr18 + 3180 7 novel_not_in_catalog TNFRSF11A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3110 None 4 9 2 TRUE 0 0 NA A coding 154 462 3 464 PB.519.2 chr1 + 5244 10 novel_not_in_catalog VCAM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3560 None 5 30 1 TRUE 0 0 NA C coding 739 2217 111 2327 PB.6542.1 chr11 + 2430 1 full-splice_match RP11-111M22.2 ENST00000530460.1 2462 1 25 7 no_subtype FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA A coding 210 630 489 1118 PB.4192.1 chr6 - 1619 3 genic RP1-12G14.9 novel NA NA NA NA no_subtype FALSE canonical NA NA 1587 None 2 10 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.6562.2 chr11 - 5861 11 novel_not_in_catalog GAB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 165 None 26 32 1 TRUE 0 0 NA C coding 676 2028 91 2118 PB.6562.3 chr11 - 2639 2 full-splice_match GAB2 ENST00000534823.1 568 2 -13 -2058 no_subtype FALSE canonical NA NA 139 None 3 16 0 FALSE 0 0 NA C coding 139 417 65 481 PB.10757.1 chr22 - 3530 1 genic_intron novelGene_378 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 33 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7453.1 chr13 + 1703 1 genic_intron novelGene_413 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11053.2 chrX - 3121 1 novel_in_catalog CYSLTR1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2386.1 chr3 + 2894 5 novel_not_in_catalog TIGIT novel NA NA NA NA no_subtype FALSE canonical NA NA 508 None 8 19 0 TRUE 0 0 NA A coding 244 732 8 739 PB.1070.1 chr1 + 2922 22 novel_not_in_catalog CAPN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1919 None 292 5 0 TRUE 0 0 NA B coding 375 1125 816 1940 PB.8339.18 chr16 + 619 6 novel_not_in_catalog HBA2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 592 None 9 2 1 TRUE 0 0 NA C coding 132 396 35 430 PB.1857.1 chr2 - 3055 9 novel_in_catalog TMBIM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 245 None 7 9 0 FALSE 0 0 NA C coding 137 411 1370 1780 PB.7608.18 chr14 + 1403 7 fusion TRAC,TRAV12-3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 862 None 2 1 0 TRUE 0 0 NA B coding 271 813 46 858 PB.7941.7 chr14 + 2753 5 incomplete-splice_match EIF5 ENST00000558506.1 4384 10 1619 12 internal_fragment FALSE canonical NA NA 499 None 3 24 0 FALSE 0 0 NA C coding 157 471 116 586 PB.8339.13 chr16 + 574 3 fusion HBA1,HBA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 337 None 25 1 0 FALSE 0 0 NA B coding 142 426 38 463 PB.8339.11 chr16 + 742 5 fusion HBA1,HBA2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 700 None 2 5 2 TRUE 0 0 NA B coding 142 426 38 463 PB.8339.16 chr16 + 724 2 fusion HBA1,HBA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 132 None 5 2 0 FALSE 0 0 NA B coding 143 429 38 466 PB.8339.17 chr16 + 523 3 full-splice_match HBA2 ENST00000397806.1 513 3 -14 4 no_subtype FALSE canonical NA NA 288 None 5 0 0 FALSE 0 0 NA C coding 110 330 85 414 PB.8339.14 chr16 + 573 3 fusion HBA1,HBA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 337 None 5 2 1 FALSE 0 0 NA B coding 142 426 38 463 PB.8339.15 chr16 + 575 4 fusion HBA1,HBA2 novel NA NA NA NA no_subtype TRUE canonical NA NA 337 None 2 1 0 TRUE 0 0 NA B coding 142 426 38 463 PB.8502.1 chr16 + 3002 7 novel_not_in_catalog DCTN5 novel NA NA NA NA no_subtype TRUE canonical NA NA 1871 None 34 10 0 TRUE 0 0 NA A coding 182 546 42 587 PB.7941.5 chr14 + 3079 7 novel_not_in_catalog EIF5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 829 None 2 26 0 FALSE 0 0 NA C coding 237 711 206 916 PB.2387.1 chr3 - 2798 2 novel_not_in_catalog ZBTB20 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1842 None 2 17 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.9614.1 chr18 + 1837 2 antisense novelGene_MBP_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1264 None 3 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6409.2 chr11 + 3116 17 full-splice_match RPS6KA4 ENST00000334205.8 3119 17 1 2 no_subtype FALSE canonical NA NA 2185 None 8 5 0 FALSE 0 0 NA A coding 772 2316 65 2380 PB.2461.3 chr3 - 4248 5 novel_not_in_catalog RAB43 novel NA NA NA NA no_subtype TRUE canonical NA NA 333 None 2 28 1 TRUE 0 0 NA C coding 212 636 130 765 PB.5158.2 chr8 - 1830 11 full-splice_match PUF60 ENST00000349157.10 1821 11 -17 8 no_subtype FALSE canonical NA NA 90 None 69 1 0 FALSE 0 0 NA C coding 542 1626 67 1692 PB.9898.1 chr19 - 2063 14 full-splice_match SUGP1 ENST00000247001.9 2423 14 347 13 no_subtype FALSE canonical NA NA 35 None 4 2 0 FALSE 0 0 NA A coding 645 1935 2 1936 PB.5158.1 chr8 - 1697 12 full-splice_match PUF60 ENST00000526683.5 2412 12 545 170 no_subtype FALSE canonical NA NA 35 None 53 7 2 FALSE 0 0 NA C coding 559 1677 12 1688 PB.1744.10 chr2 - 3446 9 novel_not_in_catalog SLC40A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 368 None 10 9 0 FALSE 0 0 NA B coding 531 1593 581 2173 PB.1934.1 chr2 + 2778 2 genic_intron novelGene_1417 novel NA NA NA NA no_subtype TRUE canonical NA NA 1060 None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5008.1 chr8 + 2622 1 novel_in_catalog RIPK2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2297.2 chr3 - 3945 23 novel_in_catalog FRMD4B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 101 None 3 3 0 FALSE 0 0 NA C coding 980 2940 102 3041 PB.9830.1 chr19 + 2953 13 novel_not_in_catalog CLEC17A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 999 None 6 14 2 TRUE 0 0 NA A coding 310 930 200 1129 PB.10893.3 chrX - 2887 22 full-splice_match RPS6KA3 ENST00000379565.7 7918 22 214 4817 no_subtype FALSE canonical NA NA 63 None 2 2 0 FALSE 0 0 NA A coding 728 2184 31 2214 PB.7941.1 chr14 + 3853 12 full-splice_match EIF5 ENST00000216554.7 5945 12 235 1857 no_subtype FALSE canonical NA NA 1647 None 81 39 1 FALSE 0 0 NA C coding 431 1293 442 1734 PB.3615.21 chr5 + 3365 2 novel_not_in_catalog CYFIP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2973 None 2 20 1 FALSE 0 0 NA C coding 127 381 2758 3138 PB.9057.1 chr17 + 2856 1 antisense novelGene_RFFL_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3384.5 chr5 - 1215 3 full-splice_match GLRX ENST00000505427.1 632 3 -2 -581 no_subtype TRUE canonical NA NA 269 None 2 5 1 FALSE 0 0 NA C coding 106 318 63 380 PB.3384.4 chr5 - 2907 2 full-splice_match GLRX ENST00000512469.2 473 2 -14 -2420 no_subtype FALSE canonical NA NA 270 None 6 10 0 FALSE 0 0 NA C coding 106 318 64 381 PB.3384.1 chr5 - 5991 3 novel_not_in_catalog GLRX novel NA NA NA NA no_subtype TRUE non_canonical NA NA 420 None 2 48 2 TRUE 0 0 NA C coding 101 303 4207 4509 PB.7009.2 chr12 - 1608 3 full-splice_match NFE2 ENST00000553198.1 1208 3 -51 -349 no_subtype FALSE canonical NA NA 172 None 2 2 0 FALSE 0 0 NA C coding 373 1119 229 1347 PB.7009.1 chr12 - 1717 3 full-splice_match NFE2 ENST00000435572.6 1762 3 36 9 no_subtype FALSE canonical NA NA 285 None 87 0 0 FALSE 0 0 NA C coding 373 1119 342 1460 PB.6238.1 chr11 + 1930 4 novel_not_in_catalog TMEM86A novel NA NA NA NA no_subtype FALSE canonical NA NA 394 None 4 7 0 TRUE 0 0 NA A coding 240 720 109 828 PB.5360.15 chr9 - 7181 2 novel_not_in_catalog SEMA4D novel NA NA NA NA no_subtype FALSE canonical NA NA 169 None 3 39 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.5360.14 chr9 - 7135 1 novel_in_catalog SEMA4D novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 8 42 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.985.1 chr1 + 3566 2 novel_not_in_catalog ATP2B4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 299 None 5 20 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.5360.13 chr9 - 6493 4 novel_not_in_catalog SEMA4D novel NA NA NA NA no_subtype FALSE canonical NA NA 97 None 2 38 2 TRUE 0 0 NA B coding 105 315 4685 4999 PB.99.2 chr1 - 2658 1 genic_intron novelGene_178 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3919.1 chr6 - 1674 7 full-splice_match MRPS10 ENST00000053468.3 2110 7 -10 446 no_subtype FALSE canonical NA NA 74 None 16 8 0 FALSE 0 0 NA A coding 201 603 27 629 PB.7328.2 chr12 - 2480 17 full-splice_match ANAPC5 ENST00000261819.7 2513 17 29 4 no_subtype FALSE canonical NA NA 300 None 4 1 0 FALSE 0 0 NA C coding 755 2265 94 2358 PB.9087.4 chr17 + 3449 4 incomplete-splice_match LASP1 ENST00000433206.6 4023 6 572 2 internal_fragment FALSE canonical NA NA 286 None 11 14 0 FALSE 0 0 NA C coding 131 393 65 457 PB.3140.1 chr4 + 3774 30 full-splice_match TRAPPC11 ENST00000334690.10 4552 30 37 741 no_subtype TRUE canonical NA NA 3522 None 2 3 0 FALSE 0 0 NA A coding 1133 3399 166 3564 PB.7328.5 chr12 - 3548 16 novel_in_catalog ANAPC5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 284 None 2 5 0 FALSE 0 0 NA C coding 435 1305 78 1382 PB.7521.1 chr13 + 2854 1 genic_intron novelGene_691 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 10 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3253.1 chr5 + 5857 1 genic_intron novelGene_534 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 51 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2994.1 chr4 + 3567 5 full-splice_match CYP2U1 ENST00000332884.10 4944 5 187 1190 no_subtype FALSE canonical NA NA 1544 None 7 4 0 FALSE 0 0 NA C coding 544 1632 89 1720 PB.9047.3 chr17 + 2846 1 novel_in_catalog ZNF207 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 11 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9047.1 chr17 + 2086 11 full-splice_match ZNF207 ENST00000394673.6 2124 11 25 13 no_subtype FALSE canonical NA NA 1354 None 16 1 0 FALSE 0 0 NA C coding 463 1389 124 1512 PB.10559.1 chr21 + 1555 4 antisense novelGene_DSCR3_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1514 None 5 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9047.4 chr17 + 3471 1 incomplete-splice_match ZNF207 ENST00000394670.8 13781 12 6200 4111 no_subtype FALSE canonical NA NA NA None 23 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9408.2 chr17 + 2770 12 novel_not_in_catalog PGS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2403 None 2 14 1 TRUE 0 0 NA C coding 480 1440 19 1458 PB.9408.3 chr17 + 2156 10 full-splice_match PGS1 ENST00000262764.10 2201 10 21 24 no_subtype FALSE canonical NA NA 1686 None 5 2 0 FALSE 0 0 NA C coding 556 1668 6 1673 PB.6242.1 chr11 - 1225 1 full-splice_match FANCF ENST00000327470.4 4269 1 942 2102 no_subtype FALSE canonical NA NA NA None 6 1 0 FALSE 0 0 NA A coding 374 1122 36 1157 PB.1054.1 chr1 - 1720 1 genic_intron novelGene_1400 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1960.3 chr2 + 3211 13 full-splice_match SEPT2 ENST00000391971.6 3315 13 98 6 no_subtype FALSE canonical NA NA 1156 None 350 22 0 FALSE 0 0 NA C coding 361 1083 42 1124 PB.8693.1 chr16 - 3071 15 full-splice_match ESRP2 ENST00000473183.6 3793 15 436 286 no_subtype FALSE canonical NA NA 301 None 20 8 0 FALSE 0 0 NA A coding 717 2151 104 2254 PB.7593.1 chr14 - 1305 11 full-splice_match OSGEP ENST00000206542.8 2002 11 298 399 no_subtype FALSE canonical NA NA 239 None 7 1 0 FALSE 0 0 NA A coding 335 1005 125 1129 PB.4262.1 chr7 + 2049 9 full-splice_match GET4 ENST00000265857.7 2090 9 39 2 no_subtype FALSE canonical NA NA 950 None 10 7 0 FALSE 0 0 NA C coding 321 963 74 1036 PB.6540.1 chr11 + 3449 16 novel_not_in_catalog UVRAG novel NA NA NA NA no_subtype FALSE canonical NA NA 1511 None 3 4 0 TRUE 0 0 NA B coding 699 2097 115 2211 PB.4262.3 chr7 + 2783 11 novel_not_in_catalog GET4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1683 None 4 19 0 TRUE 0 0 NA C coding 274 822 948 1769 PB.3472.2 chr5 - 3353 14 novel_not_in_catalog AFF4 novel NA NA NA NA no_subtype FALSE canonical NA NA 373 None 10 4 0 TRUE 0 0 NA B coding 900 2700 378 3077 PB.11173.1 chrX - 2922 19 novel_not_in_catalog MAP7D3 novel NA NA NA NA no_subtype FALSE canonical NA NA 83 None 5 3 0 FALSE 0 0 NA A coding 875 2625 17 2641 PB.1387.1 chr2 + 2810 13 full-splice_match MEIS1 ENST00000272369.13 4291 13 371 1110 no_subtype FALSE canonical NA NA 1296 None 37 2 0 FALSE 0 0 NA C coding 368 1104 153 1256 PB.1387.3 chr2 + 2712 12 novel_in_catalog MEIS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1201 None 4 3 0 FALSE 0 0 NA C coding 443 1329 154 1482 PB.4510.1 chr7 - 5781 2 full-splice_match SAMD9 ENST00000620985.4 6754 2 56 917 no_subtype FALSE canonical NA NA 105 None 4 11 1 FALSE 0 0 NA C coding 1589 4767 114 4880 PB.6141.1 chr11 + 1533 11 full-splice_match SLC22A18 ENST00000312221.9 1628 11 91 4 no_subtype TRUE canonical NA NA 1300 None 18 1 0 FALSE 0 0 NA C coding 424 1272 214 1485 PB.6141.3 chr11 + 1451 10 novel_in_catalog SLC22A18 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1220 None 2 1 0 FALSE 0 0 NA C coding 424 1272 134 1405 PB.6141.2 chr11 + 1549 11 novel_not_in_catalog SLC22A18 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1317 None 23 1 0 FALSE 0 0 NA C coding 424 1272 231 1502 PB.9866.1 chr19 + 1606 1 full-splice_match PGLS ENST00000596799.1 1601 1 -24 19 no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA A coding 200 600 54 653 PB.4580.1 chr7 + 2678 12 full-splice_match PSMC2 ENST00000292644.4 2637 12 -38 -3 no_subtype FALSE canonical NA NA 1182 None 77 15 0 FALSE 0 0 NA A coding 433 1299 39 1337 PB.268.1 chr1 - 1386 7 full-splice_match MEAF6 ENST00000296214.9 1525 7 -1 140 no_subtype FALSE canonical NA NA 119 None 16 6 0 FALSE 0 0 NA A coding 191 573 30 602 PB.1859.13 chr2 + 2384 8 novel_not_in_catalog SLC11A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1644 None 2 14 0 FALSE 0 0 NA C coding 121 363 1297 1659 PB.358.1 chr1 - 3004 1 genic_intron novelGene_504 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A coding 108 324 2679 3002 PB.2194.1 chr3 - 1336 5 full-splice_match RHOA ENST00000418115.5 2031 5 223 472 no_subtype FALSE canonical NA NA 160 None 505 0 0 FALSE 0 0 NA C coding 193 579 163 741 PB.6252.1 chr11 - 3002 2 genic_intron novelGene_310 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 700 None 11 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9882.1 chr19 - 1377 3 full-splice_match LRRC25 ENST00000595840.1 1924 3 9 538 no_subtype FALSE canonical NA NA 150 None 25 5 0 FALSE 0 0 NA A coding 305 915 160 1074 PB.8601.1 chr16 + 1442 2 antisense novelGene_SNX20_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 850 None 17 4 0 FALSE 0 0 NA A coding 99 297 1057 1353 PB.4934.1 chr8 - 1419 2 genic SNORD54 novel NA NA NA NA no_subtype FALSE canonical NA NA 131 None 3 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8280.16 chr15 + 2865 1 novel_in_catalog ABHD2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1550.1 chr2 + 3198 11 full-splice_match SLC20A1 ENST00000272542.7 3381 11 174 9 no_subtype FALSE canonical NA NA 2243 None 53 8 0 FALSE 0 0 NA C coding 679 2037 366 2402 PB.6455.6 chr11 + 2745 1 genic_intron novelGene_623 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9850.7 chr19 - 2658 22 full-splice_match EPS15L1 ENST00000535753.6 2666 22 23 -15 no_subtype FALSE canonical NA NA 41 None 3 2 0 FALSE 0 0 NA C coding 754 2262 9 2270 PB.9035.1 chr17 + 4475 31 incomplete-splice_match NF1 ENST00000358273.8 12425 58 50 7900 3prime_fragment TRUE canonical NA NA 4443 None 5 0 0 FALSE 0 0 NA B coding 1380 4140 334 4473 PB.8986.1 chr17 + 2151 13 novel_not_in_catalog MAP2K3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1091 None 15 5 0 TRUE 0 0 NA B coding 347 1041 129 1169 PB.3486.1 chr5 + 6351 11 novel_in_catalog JADE2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1619 None 2 18 1 FALSE 0 0 NA C coding 791 2373 68 2440 PB.8986.2 chr17 + 1526 2 novel_in_catalog MAP2K3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 259 None 2 5 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8986.3 chr17 + 6339 2 novel_not_in_catalog MAP2K3 novel NA NA NA NA no_subtype FALSE canonical NA NA 4738 None 12 17 1 TRUE 0 0 NA B coding 166 498 211 708 PB.6628.1 chr11 + 1642 1 novel_in_catalog CUL5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 12 0 FALSE 0 0 NA B coding 110 330 1 330 PB.121.1 chr1 + 5915 18 full-splice_match ZBTB40 ENST00000375647.4 8685 18 -8 2778 no_subtype FALSE canonical NA NA 3740 None 5 9 1 FALSE 0 0 NA C coding 1239 3717 216 3932 PB.121.2 chr1 + 6052 19 novel_not_in_catalog ZBTB40 novel NA NA NA NA no_subtype FALSE canonical NA NA 3838 None 6 8 0 FALSE 0 0 NA C coding 1239 3717 314 4030 PB.121.3 chr1 + 5770 17 novel_in_catalog ZBTB40 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3595 None 2 11 0 FALSE 0 0 NA C coding 1239 3717 71 3787 PB.6804.1 chr12 + 3221 16 novel_in_catalog PEX5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1791 None 4 6 0 FALSE 0 0 NA C coding 639 1917 74 1990 PB.8216.1 chr15 - 2904 3 full-splice_match SIN3A ENST00000567289.5 4078 3 -19 1193 no_subtype FALSE canonical NA NA 261 None 2 6 0 FALSE 0 0 NA C coding 156 468 295 762 PB.6804.3 chr12 + 3010 15 novel_not_in_catalog PEX5 novel NA NA NA NA no_subtype FALSE canonical NA NA 1614 None 2 8 0 TRUE 0 0 NA C coding 581 1743 37 1779 PB.6804.2 chr12 + 3091 15 full-splice_match PEX5 ENST00000266563.9 3252 15 131 30 no_subtype FALSE canonical NA NA 1659 None 2 8 0 FALSE 0 0 NA C coding 602 1806 53 1858 PB.3146.8 chr4 - 3833 21 full-splice_match ACSL1 ENST00000513317.5 2469 21 80 -1444 no_subtype FALSE canonical NA NA 182 None 4 7 1 FALSE 0 0 NA C coding 698 2094 215 2308 PB.9520.1 chr18 - 3287 2 genic CHST9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3010 None 5 15 0 TRUE 0 0 NA A coding 86 258 246 503 PB.9582.1 chr18 - 3215 12 novel_not_in_catalog CCBE1 novel NA NA NA NA no_subtype FALSE canonical NA NA 172 None 5 13 0 TRUE 0 0 NA A coding 406 1218 42 1259 PB.3064.5 chr4 + 2568 11 novel_in_catalog SMARCA5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1324 None 2 2 0 FALSE 0 0 NA C coding 430 1290 98 1387 PB.3146.1 chr4 - 3236 21 full-splice_match ACSL1 ENST00000281455.6 3832 21 70 526 no_subtype FALSE canonical NA NA 109 None 142 6 0 FALSE 0 0 NA C coding 698 2094 142 2235 PB.7003.1 chr12 - 2911 16 novel_not_in_catalog CALCOCO1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 36 None 116 7 2 TRUE 0 0 NA C coding 658 1974 61 2034 PB.3146.5 chr4 - 1544 1 incomplete-splice_match ACSL1 ENST00000503407.5 2409 9 865 1 no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6514.2 chr11 + 1729 4 genic RP11-800A3.4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 275 None 2 8 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.5644.1 chr9 + 1553 8 full-splice_match ARRDC1 ENST00000371421.8 1586 8 32 1 no_subtype FALSE canonical NA NA 1269 None 47 2 0 FALSE 0 0 NA A coding 433 1299 33 1331 PB.1024.1 chr1 - 2126 1 genic_intron novelGene_1392 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2297.1 chr3 - 3253 13 full-splice_match FRMD4B ENST00000478263.5 3761 13 327 181 no_subtype FALSE canonical NA NA 151 None 13 3 0 FALSE 0 0 NA C coding 686 2058 320 2377 PB.3068.1 chr4 + 2517 2 genic RTN3P1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1868 None 37 17 1 FALSE 0 0 NA C coding 236 708 133 840 PB.2731.1 chr4 + 3253 19 full-splice_match MAN2B2 ENST00000285599.7 5143 19 27 1863 no_subtype TRUE canonical NA NA 2941 None 75 5 0 FALSE 0 0 NA A coding 1009 3027 10 3036 PB.5351.1 chr9 - 1466 11 novel_not_in_catalog GOLM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 131 None 34 6 1 TRUE 0 0 NA B coding 401 1203 153 1355 PB.2965.1 chr4 - 3532 1 genic_intron novelGene_893 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3495.7 chr5 - 1361 9 full-splice_match H2AFY ENST00000511689.5 2789 9 393 1035 no_subtype FALSE canonical NA NA 168 None 4 2 0 FALSE 0 0 NA C coding 372 1116 202 1317 PB.5351.2 chr9 - 1478 11 novel_not_in_catalog GOLM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 145 None 33 4 0 TRUE 0 0 NA B coding 391 1173 197 1369 PB.296.1 chr1 + 3251 2 full-splice_match EXO5 ENST00000420209.1 863 2 -10 -2378 no_subtype FALSE canonical NA NA 165 None 2 12 0 FALSE 0 0 NA A coding 373 1119 196 1314 PB.8488.2 chr16 + 3052 3 antisense novelGene_IGSF6_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2912 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8488.1 chr16 + 1548 5 full-splice_match METTL9 ENST00000358154.7 3256 5 169 1539 no_subtype FALSE canonical NA NA 840 None 95 1 0 FALSE 0 0 NA A coding 318 954 90 1043 PB.3064.1 chr4 + 3606 24 full-splice_match SMARCA5 ENST00000283131.3 7923 24 243 4074 no_subtype FALSE canonical NA NA 3312 None 55 2 0 FALSE 0 0 NA C coding 1052 3156 220 3375 PB.9728.1 chr19 + 2684 12 full-splice_match MAP2K7 ENST00000397983.7 3396 12 -8 720 no_subtype FALSE canonical NA NA 1241 None 4 11 0 FALSE 0 0 NA C coding 435 1305 69 1373 PB.10694.1 chr22 + 5889 21 novel_not_in_catalog MTMR3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4147 None 34 13 1 TRUE 0 0 NA B coding 1198 3594 264 3857 PB.10694.2 chr22 + 5825 20 novel_not_in_catalog MTMR3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4083 None 4 17 1 TRUE 0 0 NA B coding 1161 3483 311 3793 PB.10694.3 chr22 + 5880 20 novel_not_in_catalog MTMR3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4132 None 3 14 1 TRUE 0 0 NA B coding 1198 3594 249 3842 PB.10694.4 chr22 + 5972 21 novel_not_in_catalog MTMR3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4249 None 3 16 1 TRUE 0 0 NA B coding 1198 3594 366 3959 PB.8748.1 chr16 - 1277 8 novel_not_in_catalog CFDP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 210 None 4 1 0 TRUE 0 0 NA A coding 299 897 147 1043 PB.10694.6 chr22 + 5779 20 novel_not_in_catalog MTMR3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4022 None 4 13 1 TRUE 0 0 NA B coding 1198 3594 139 3732 PB.9776.1 chr19 - 1506 5 full-splice_match RAB3D ENST00000222120.7 4273 5 21 2746 no_subtype FALSE canonical NA NA 179 None 3 4 0 FALSE 0 0 NA A coding 219 657 241 897 PB.5851.1 chr10 - 3156 3 novel_not_in_catalog ZSWIM8-AS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1290 None 6 10 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.7999.1 chr15 + 2458 18 novel_not_in_catalog IVD novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2364 None 3 15 6 TRUE 0 0 NA B coding 371 1113 161 1273 PB.3979.2 chr6 - 2632 1 antisense novelGene_PTP4A1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 109 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7999.3 chr15 + 1668 1 incomplete-splice_match BAHD1 ENST00000416165.5 4526 7 2845 14 no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7999.2 chr15 + 2642 19 novel_not_in_catalog IVD novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2499 None 4 10 2 TRUE 0 0 NA B coding 371 1113 161 1273 PB.9850.9 chr19 - 3550 16 full-splice_match EPS15L1 ENST00000597937.5 3486 16 -34 -30 no_subtype FALSE canonical NA NA 72 None 47 8 0 FALSE 0 0 NA C coding 601 1803 40 1842 PB.5921.1 chr10 + 1715 4 full-splice_match HHEX ENST00000282728.9 1727 4 4 8 no_subtype FALSE canonical NA NA 623 None 30 7 0 FALSE 0 0 NA C coding 270 810 33 842 PB.3578.2 chr5 + 4394 25 novel_not_in_catalog TCOF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3834 None 9 11 1 TRUE 0 0 NA A coding 1447 4341 54 4394 PB.742.8 chr1 + 2703 13 novel_not_in_catalog SEMA4A novel NA NA NA NA no_subtype FALSE canonical NA NA 1374 None 8 2 0 TRUE 0 0 NA C coding 592 1776 189 1964 PB.1691.1 chr2 - 2888 1 genic_intron novelGene_1305 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 12 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.60 chr14 - 1498 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 13 2 TRUE 0 0 NA B coding 254 762 691 1452 PB.7959.61 chr14 - 1480 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 15 3 TRUE 0 0 NA B coding 260 780 11 790 PB.7959.62 chr14 - 1478 8 fusion IGHV4-34,IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 29 None 2 19 3 TRUE 0 0 NA A coding 381 1143 290 1432 PB.7959.63 chr14 - 1521 7 fusion IGHA1,IGHV3-21 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 121 None 2 23 3 TRUE 0 0 NA A coding 251 753 723 1475 PB.9163.8 chr17 - 3788 29 novel_not_in_catalog HDAC5 novel NA NA NA NA no_subtype FALSE canonical NA NA 154 None 3 1 0 TRUE 0 0 NA B coding 1122 3366 344 3709 PB.7959.65 chr14 - 1452 9 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 83 None 2 16 4 TRUE 0 0 NA B coding 251 753 654 1406 PB.7959.66 chr14 - 1495 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 14 2 TRUE 0 0 NA B coding 265 795 11 805 PB.7959.67 chr14 - 1527 7 fusion IGHA1,CH17-212P11.5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 103 None 5 9 1 TRUE 0 0 NA B coding 254 762 720 1481 PB.7959.68 chr14 - 1532 6 fusion IGHV6-1,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 104 None 3 6 1 TRUE 0 0 NA B coding 254 762 725 1486 PB.9163.5 chr17 - 3729 27 novel_in_catalog HDAC5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 93 None 77 0 0 FALSE 0 0 NA B coding 1122 3366 283 3648 PB.3850.9 chr6 - 2691 18 novel_not_in_catalog RGL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 68 None 2 9 1 FALSE 0 0 NA C coding 337 1011 1240 2250 PB.9163.3 chr17 - 3754 28 novel_not_in_catalog HDAC5 novel NA NA NA NA no_subtype FALSE canonical NA NA 113 None 102 1 1 FALSE 0 0 NA B coding 1091 3273 403 3675 PB.10571.1 chr21 + 2922 1 incomplete-splice_match B3GALT5 ENST00000380620.8 13170 5 10245 4 no_subtype FALSE canonical NA NA NA None 17 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10019.11 chr19 + 3576 31 novel_in_catalog ARHGEF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3237 None 3 1 0 FALSE 0 0 NA C coding 987 2961 257 3217 PB.10019.10 chr19 + 3182 30 novel_not_in_catalog ARHGEF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2841 None 2 3 2 FALSE 0 0 NA C coding 837 2511 75 2585 PB.1550.5 chr2 + 3349 12 novel_in_catalog SLC20A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2393 None 9 11 0 FALSE 0 0 NA C coding 426 1278 1275 2552 PB.9794.1 chr19 - 1676 10 full-splice_match FBXW9 ENST00000393261.7 1738 10 55 7 no_subtype FALSE canonical NA NA 416 None 6 2 0 FALSE 0 0 NA A coding 458 1374 8 1381 PB.1828.1 chr2 - 3507 1 incomplete-splice_match FZD5 ENST00000295417.3 6708 2 3198 4 no_subtype FALSE canonical NA NA NA None 16 15 0 FALSE 0 0 NA A coding 104 312 1772 2083 PB.1469.1 chr2 - 3069 1 novel_in_catalog FABP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 17 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1731.1 chr2 - 4104 15 novel_in_catalog PDE1A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 454 None 2 12 0 FALSE 0 0 NA A coding 529 1587 402 1988 PB.8323.1 chr15 + 1909 10 full-splice_match LRRC28 ENST00000301981.7 5971 10 121 3941 no_subtype FALSE canonical NA NA 1150 None 2 8 1 FALSE 0 0 NA A coding 367 1101 120 1220 PB.5276.4 chr9 - 4260 10 novel_in_catalog PIGO novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 27 None 2 36 1 FALSE 0 0 NA B coding 969 2907 29 2935 PB.6735.4 chr11 + 2902 2 genic_intron novelGene_1111 novel NA NA NA NA no_subtype FALSE canonical NA NA 2854 None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2964.2 chr4 + 2521 15 full-splice_match RAP1GDS1 ENST00000408927.7 3681 15 -39 1199 no_subtype FALSE canonical NA NA 1848 None 13 0 0 FALSE 0 0 NA A coding 607 1821 153 1973 PB.5276.1 chr9 - 3707 11 novel_in_catalog PIGO novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 41 None 27 6 0 FALSE 0 0 NA B coding 1089 3267 43 3309 PB.6735.3 chr11 + 3113 4 novel_in_catalog FLI1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 537 None 6 18 0 FALSE 0 0 NA C coding 250 750 153 902 PB.6735.1 chr11 + 2921 9 full-splice_match FLI1 ENST00000527786.6 4127 9 352 854 no_subtype FALSE canonical NA NA 966 None 121 7 0 FALSE 0 0 NA C coding 452 1356 138 1493 PB.1290.1 chr2 - 2833 1 novel_in_catalog THUMPD2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1784.1 chr2 - 3227 1 genic_intron novelGene_1370 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4325.3 chr7 + 2786 5 full-splice_match KLHL7 ENST00000322275.9 969 5 8 -1825 no_subtype FALSE canonical NA NA 676 None 2 20 0 FALSE 0 0 NA C coding 166 498 235 732 PB.4325.2 chr7 + 2883 10 novel_in_catalog KLHL7 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1481 None 2 7 0 FALSE 0 0 NA C coding 336 1008 246 1253 PB.4325.1 chr7 + 2996 11 full-splice_match KLHL7 ENST00000339077.9 5620 11 10 2614 no_subtype FALSE canonical NA NA 1710 None 30 6 0 FALSE 0 0 NA C coding 586 1758 234 1991 PB.3583.1 chr5 + 1631 3 novel_not_in_catalog SMIM3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 327 None 16 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8760.1 chr16 - 3162 4 intergenic novelGene_740 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1444 None 2 15 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.1421.1 chr2 + 1287 9 full-splice_match ACTG2 ENST00000345517.7 1530 9 29 214 no_subtype FALSE canonical NA NA 1067 None 86 4 0 FALSE 0 0 NA C coding 376 1128 81 1208 PB.4278.1 chr7 + 1640 13 full-splice_match WIPI2 ENST00000404704.7 1663 13 -20 43 no_subtype FALSE canonical NA NA 1413 None 2 4 0 FALSE 0 0 NA C coding 443 1329 195 1523 PB.4278.2 chr7 + 1605 12 full-splice_match WIPI2 ENST00000401525.7 2112 12 46 461 no_subtype FALSE canonical NA NA 1376 None 3 0 0 FALSE 0 0 NA C coding 436 1308 179 1486 PB.3491.1 chr5 + 3597 24 novel_not_in_catalog DDX46 novel NA NA NA NA no_subtype FALSE canonical NA NA 3219 None 2 3 2 TRUE 0 0 NA A coding 883 2649 161 2809 PB.4893.1 chr8 - 6212 42 full-splice_match ANK1 ENST00000347528.8 8237 42 -85 2110 no_subtype TRUE canonical NA NA 196 None 3 4 1 FALSE 0 0 NA A coding 1881 5643 170 5812 PB.4150.7 chr6 - 2477 1 genic_intron novelGene_1168 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6106.1 chr11 + 2809 13 full-splice_match PKP3 ENST00000331563.6 2809 13 -2 2 no_subtype TRUE canonical NA NA 2436 None 27 4 0 FALSE 0 0 NA A coding 797 2391 79 2469 PB.1242.1 chr2 - 2660 5 full-splice_match SUPT7L ENST00000464789.2 2664 5 7 -3 no_subtype FALSE canonical NA NA 118 None 2 5 0 FALSE 0 0 NA A coding 412 1236 1004 2239 PB.3000.1 chr4 + 1655 2 genic RNU6-431P novel NA NA NA NA no_subtype FALSE canonical NA NA 195 None 2 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1534.2 chr2 + 2660 6 incomplete-splice_match GCC2 ENST00000309863.10 7537 23 655 4222 3prime_fragment FALSE canonical NA NA 380 None 7 23 0 FALSE 0 0 NA B coding 867 2601 60 2660 PB.1838.1 chr2 - 1676 2 genic_intron novelGene_1397 novel NA NA NA NA no_subtype FALSE canonical NA NA 1595 None 5 8 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7249.1 chr12 - 1358 8 full-splice_match GPN3 ENST00000228827.7 1468 8 35 75 no_subtype FALSE canonical NA NA 76 None 12 6 0 FALSE 0 0 NA A coding 284 852 29 880 PB.3592.1 chr5 + 5601 12 novel_not_in_catalog SLC36A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 5500 None 2 25 1 TRUE 0 0 NA B coding 476 1428 76 1503 PB.8681.2 chr16 - 1792 13 novel_not_in_catalog CENPT novel NA NA NA NA no_subtype TRUE canonical NA NA 146 None 2 3 0 FALSE 0 0 NA B coding 549 1647 37 1683 PB.1275.12 chr2 - 2721 20 novel_not_in_catalog EIF2AK2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 45 None 4 16 4 TRUE 0 0 NA B coding 262 786 320 1105 PB.6969.1 chr12 + 5881 5 novel_not_in_catalog DIP2B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3497 None 5 39 1 TRUE 0 0 NA A coding 151 453 142 594 PB.3471.1 chr5 - 3681 1 incomplete-splice_match AFF4 ENST00000265343.9 9552 21 5847 25 no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA B coding 108 324 770 1093 PB.2692.1 chr3 + 3527 1 incomplete-splice_match SENP5 ENST00000323460.9 6308 10 2776 6 no_subtype FALSE canonical NA NA NA None 2 35 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4914.1 chr8 - 2001 3 full-splice_match SNAI2 ENST00000020945.2 2099 3 11 87 no_subtype FALSE canonical NA NA 243 None 2 8 0 FALSE 0 0 NA A coding 268 804 165 968 PB.5793.1 chr10 - 3002 1 genic_intron novelGene_572 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3132.1 chr4 - 1663 7 novel_not_in_catalog FBXO8 novel NA NA NA NA no_subtype TRUE canonical NA NA 258 None 7 2 0 TRUE 0 0 NA C coding 319 957 267 1223 PB.1703.2 chr2 + 2080 12 novel_not_in_catalog AC013461.1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1024 None 2 6 0 TRUE 0 0 NA B coding 455 1365 38 1402 PB.8297.2 chr15 + 4433 23 novel_not_in_catalog BLM novel NA NA NA NA no_subtype FALSE canonical NA NA 4175 None 2 1 0 TRUE 0 0 NA B coding 1417 4251 100 4350 PB.1703.4 chr2 + 1457 1 incomplete-splice_match AC013461.1 ENST00000338983.7 7179 12 5718 5 no_subtype FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7928.1 chr14 + 1431 7 incomplete-splice_match DYNC1H1 ENST00000360184.8 14333 78 45 12857 3prime_fragment FALSE canonical NA NA 1352 None 5 1 1 FALSE 0 0 NA B coding 437 1311 120 1430 PB.9266.1 chr17 - 3564 25 full-splice_match TRIM37 ENST00000393066.7 3622 25 56 2 no_subtype TRUE canonical NA NA 425 None 2 9 0 FALSE 0 0 NA A coding 964 2892 405 3296 PB.3163.4 chr5 - 6099 23 novel_in_catalog SLC12A7 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 102 None 2 38 2 FALSE 0 0 NA B coding 1014 3042 183 3224 PB.3163.5 chr5 - 5066 23 novel_in_catalog SLC12A7 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 96 None 2 20 0 FALSE 0 0 NA B coding 1015 3045 82 3126 PB.3163.3 chr5 - 5559 22 novel_in_catalog SLC12A7 novel NA NA NA NA combination_of_known_junctions TRUE non_canonical NA NA 96 None 2 30 0 FALSE 0 0 NA B coding 497 1491 2093 3583 PB.5768.14 chr10 - 3275 9 novel_in_catalog NCOA4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 72 None 12 14 0 FALSE 0 0 NA C coding 448 1344 430 1773 PB.7494.1 chr13 - 2839 17 full-splice_match KPNA3 ENST00000261667.7 4474 17 362 1273 no_subtype TRUE canonical NA NA 122 None 26 5 0 FALSE 0 0 NA A coding 521 1563 54 1616 PB.4531.1 chr7 - 1300 6 full-splice_match PDAP1 ENST00000350498.7 2546 6 220 1026 no_subtype FALSE canonical NA NA 74 None 9 6 0 FALSE 0 0 NA A coding 181 543 62 604 PB.10142.3 chr19 + 2518 2 novel_not_in_catalog FPR3 novel NA NA NA NA no_subtype FALSE canonical NA NA 51 None 2 11 0 FALSE 0 0 NA B coding 353 1059 62 1120 PB.10142.1 chr19 + 2596 4 novel_not_in_catalog FPR3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 150 None 2 10 1 TRUE 0 0 NA B coding 353 1059 161 1219 PB.5757.1 chr10 + 2863 5 full-splice_match TMEM72 ENST00000389583.4 3009 5 150 -4 no_subtype FALSE canonical NA NA 512 None 2 15 0 FALSE 0 0 NA A coding 275 825 164 988 PB.6076.1 chr10 + 1532 8 novel_not_in_catalog LHPP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 900 None 2 9 0 TRUE 0 0 NA B coding 270 810 37 846 PB.4364.2 chr7 + 3555 23 full-splice_match BBS9 ENST00000242067.10 4027 23 33 439 no_subtype TRUE canonical NA NA 3120 None 2 5 0 FALSE 0 0 NA C coding 887 2661 489 3149 PB.266.1 chr1 - 3216 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 62 None 281 5 1 FALSE 0 0 NA C coding 836 2508 447 2954 PB.10011.2 chr19 + 1587 8 novel_not_in_catalog BCKDHA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1018 None 2 2 1 TRUE 0 0 NA C coding 117 351 836 1186 PB.7966.1 chr15 - 3131 11 full-splice_match UBE3A ENST00000232165.7 5051 11 54 1866 no_subtype TRUE canonical NA NA 514 None 2 3 0 FALSE 0 0 NA A coding 852 2556 555 3110 PB.266.8 chr1 - 3046 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 100 None 83 6 1 FALSE 0 0 NA C coding 836 2508 279 2786 PB.266.9 chr1 - 3377 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 68 None 14 5 1 FALSE 0 0 NA C coding 680 2040 449 2488 PB.2498.2 chr3 + 1448 2 genic_intron novelGene_1191 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1326 None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1286.1 chr2 + 2312 7 novel_not_in_catalog GALM novel NA NA NA NA no_subtype FALSE canonical NA NA 1036 None 2 10 0 TRUE 0 0 NA B coding 266 798 261 1058 PB.1286.2 chr2 + 2448 8 novel_not_in_catalog GALM novel NA NA NA NA no_subtype FALSE canonical NA NA 1173 None 4 13 0 TRUE 0 0 NA B coding 342 1026 223 1248 PB.4364.1 chr7 + 3637 2 novel_not_in_catalog BBS9 novel NA NA NA NA no_subtype FALSE canonical NA NA 2369 None 2 25 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.2498.4 chr3 + 2760 1 incomplete-splice_match SLC25A36 ENST00000446041.6 4638 7 1876 3 no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7513.3 chr13 + 2641 17 novel_not_in_catalog TDRD3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2387 None 2 9 3 TRUE 0 0 NA B coding 742 2226 150 2375 PB.7513.2 chr13 + 2641 15 novel_not_in_catalog TDRD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2386 None 8 5 0 TRUE 0 0 NA B coding 744 2232 143 2374 PB.2033.1 chr3 - 1922 17 full-splice_match HACL1 ENST00000321169.9 2266 17 295 49 no_subtype FALSE canonical NA NA 154 None 5 0 0 FALSE 0 0 NA A coding 578 1734 74 1807 PB.4948.1 chr8 - 1236 9 full-splice_match GGH ENST00000260118.6 1607 9 367 4 no_subtype FALSE canonical NA NA 145 None 2 4 0 FALSE 0 0 NA A coding 318 954 37 990 PB.5896.4 chr10 - 1469 4 novel_in_catalog ACTA2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 42 None 2 6 0 FALSE 0 0 NA C coding 154 462 66 527 PB.4292.1 chr7 + 6154 6 novel_not_in_catalog C1GALT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2804 None 2 43 1 TRUE 0 0 NA A coding 363 1089 204 1292 PB.10441.5 chr20 + 2883 1 genic_intron novelGene_501 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.753.1 chr1 - 1510 9 novel_not_in_catalog SH2D2A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 75 None 3 5 2 TRUE 0 0 NA C coding 369 1107 69 1175 PB.10436.3 chr20 + 2449 7 novel_not_in_catalog RNF114 novel NA NA NA NA no_subtype FALSE canonical NA NA 635 None 43 12 0 TRUE 0 0 NA B coding 228 684 15 698 PB.11070.1 chrX + 2871 1 genic_intron novelGene_886 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10436.1 chr20 + 5973 19 novel_not_in_catalog SLC9A8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3248 None 4 30 1 TRUE 0 0 NA A coding 581 1743 15 1757 PB.10436.6 chr20 + 1693 1 incomplete-splice_match RNF114 ENST00000244061.5 2503 6 799 12 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10436.7 chr20 + 1700 3 full-splice_match SNAI1 ENST00000244050.2 1686 3 -19 5 no_subtype FALSE canonical NA NA 690 None 3 7 0 FALSE 0 0 NA A coding 264 792 81 872 PB.10436.5 chr20 + 3319 2 novel_not_in_catalog RNF114 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1532 None 35 11 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.9738.14 chr19 - 3753 28 novel_in_catalog MYO1F novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 139 None 9 4 1 FALSE 0 0 NA C coding 1068 3204 137 3340 PB.5876.1 chr10 + 6270 3 antisense novelGene_ANXA11_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 946 None 3 43 2 FALSE 0 0 NA A coding 125 375 2704 3078 PB.9738.17 chr19 - 1168 1 full-splice_match MYO1F ENST00000595046.1 1001 1 97 -264 no_subtype FALSE canonical NA NA NA None 6 7 0 FALSE 0 0 NA C coding 98 294 111 404 PB.9993.1 chr19 - 3269 6 novel_not_in_catalog FCGBP novel NA NA NA NA no_subtype FALSE canonical NA NA 18 None 2 3 1 TRUE 0 0 NA B coding 952 2856 21 2876 PB.2953.1 chr4 + 3120 2 full-splice_match TIGD2 ENST00000603357.2 3217 2 83 14 no_subtype FALSE canonical NA NA 301 None 7 13 0 FALSE 0 0 NA A coding 525 1575 1210 2784 PB.9621.2 chr19 - 2741 14 novel_in_catalog MIER2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 19 None 2 12 0 FALSE 0 0 NA C coding 538 1614 11 1624 PB.6028.6 chr10 + 3164 1 genic_intron novelGene_1002 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 23 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6028.5 chr10 + 6143 2 genic_intron novelGene_1002 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2593 None 3 34 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.6028.4 chr10 + 3501 2 genic_intron novelGene_998 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 385 None 2 28 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10567.1 chr21 - 1255 6 full-splice_match HMGN1 ENST00000380749.9 1383 6 116 12 no_subtype FALSE canonical NA NA 182 None 37 7 0 FALSE 0 0 NA A coding 100 300 168 467 PB.917.1 chr1 + 3315 6 full-splice_match C1orf21 ENST00000235307.6 10265 6 -42 6992 no_subtype FALSE canonical NA NA 804 None 3 11 0 FALSE 0 0 NA C coding 121 363 478 840 PB.6028.1 chr10 + 3409 9 novel_not_in_catalog VTI1A novel NA NA NA NA no_subtype TRUE canonical NA NA 711 None 10 9 0 TRUE 0 0 NA A coding 217 651 152 802 PB.5955.1 chr10 - 1404 3 full-splice_match AVPI1 ENST00000370626.3 1457 3 51 2 no_subtype FALSE canonical NA NA 507 None 4 8 0 FALSE 0 0 NA A coding 147 441 518 958 PB.5577.2 chr9 + 6228 36 novel_not_in_catalog NUP214 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5983 None 5 0 0 FALSE 0 0 NA B coding 1982 5946 69 6014 PB.5577.1 chr9 + 6593 37 novel_not_in_catalog NUP214 novel NA NA NA NA no_subtype TRUE canonical NA NA 6348 None 4 3 0 TRUE 0 0 NA B coding 2090 6270 110 6379 PB.5150.3 chr8 + 1664 11 novel_in_catalog GSDMD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1276 None 3 3 1 FALSE 0 0 NA B coding 484 1452 65 1516 PB.329.2 chr1 + 2717 1 genic_intron novelGene_441 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A coding 140 420 1116 1535 PB.329.1 chr1 + 1424 6 incomplete-splice_match RNF220 ENST00000484745.5 1951 10 525 2 internal_fragment FALSE canonical NA NA 406 None 2 2 0 FALSE 0 0 NA A coding 110 330 146 475 PB.10912.1 chrX + 2878 13 full-splice_match CYBB ENST00000378588.4 4324 13 60 1386 no_subtype FALSE canonical NA NA 1593 None 33 8 1 FALSE 0 0 NA C coding 570 1710 8 1717 PB.9977.2 chr19 + 1860 5 full-splice_match NFKBIB ENST00000572515.5 1929 5 66 3 no_subtype FALSE canonical NA NA 723 None 2 8 0 FALSE 0 0 NA C coding 338 1014 16 1029 PB.9977.1 chr19 + 1192 6 full-splice_match NFKBIB ENST00000313582.5 1159 6 -28 -5 no_subtype FALSE canonical NA NA 1031 None 2 1 0 FALSE 0 0 NA C coding 356 1068 63 1130 PB.10264.2 chr20 + 2021 4 incomplete-splice_match CHGB ENST00000378961.8 2550 5 80 449 3prime_fragment FALSE canonical NA NA 314 None 2 3 0 FALSE 0 0 NA C coding 632 1896 125 2020 PB.8694.2 chr16 + 2511 8 novel_not_in_catalog PLA2G15 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2151 None 5 8 0 TRUE 0 0 NA B coding 236 708 55 762 PB.10980.2 chrX + 2919 3 novel_not_in_catalog FAM156B novel NA NA NA NA no_subtype FALSE canonical NA NA 1480 None 3 6 0 FALSE 0 0 NA B coding 213 639 1598 2236 PB.9394.1 chr17 - 1295 1 incomplete-splice_match SRSF2 ENST00000392485.2 2885 2 1586 5 no_subtype FALSE canonical NA NA NA None 6 3 0 FALSE 0 0 NA C coding 58 174 132 305 PB.9417.1 chr17 + 2554 15 novel_not_in_catalog ENGASE novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1804 None 2 10 1 TRUE 0 0 NA A coding 613 1839 380 2218 PB.5032.1 chr8 - 5727 1 full-splice_match TSPYL5 ENST00000322128.4 4491 1 3528 -4764 no_subtype FALSE canonical NA NA NA None 2 52 0 FALSE 0 0 NA A coding 140 420 2762 3181 PB.2399.1 chr3 + 5982 15 novel_not_in_catalog ARHGAP31 novel NA NA NA NA no_subtype FALSE canonical NA NA 2122 None 16 5 1 TRUE 0 0 NA A coding 995 2985 1544 4528 PB.9117.1 chr17 - 1514 9 novel_not_in_catalog KRT20 novel NA NA NA NA no_subtype FALSE canonical NA NA 450 None 520 1 0 TRUE 0 0 NA B coding 186 558 775 1332 PB.2654.4 chr3 + 1849 11 novel_in_catalog EIF4A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1084 None 7 5 1 FALSE 0 0 NA C coding 267 801 180 980 PB.2943.1 chr4 + 1553 7 full-splice_match SPP1 ENST00000395080.7 1473 7 32 -112 no_subtype FALSE canonical NA NA 635 None 2 13 1 FALSE 0 0 NA A coding 314 942 96 1037 PB.9117.2 chr17 - 3370 7 novel_not_in_catalog KRT20 novel NA NA NA NA no_subtype FALSE canonical NA NA 445 None 5 10 0 TRUE 0 0 NA B coding 142 426 770 1195 PB.3903.1 chr6 + 6182 26 novel_not_in_catalog DAAM2 novel NA NA NA NA no_subtype TRUE canonical NA NA 3128 None 4 26 0 TRUE 0 0 NA A coding 1068 3204 147 3350 PB.5784.1 chr10 + 3735 1 incomplete-splice_match PRKG1 ENST00000401604.6 5922 15 2186 2 no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2654.5 chr3 + 1742 10 full-splice_match EIF4A2 ENST00000426808.5 1751 10 5 4 no_subtype FALSE canonical NA NA 973 None 5 1 0 FALSE 0 0 NA C coding 312 936 180 1115 PB.10079.1 chr19 + 2313 2 full-splice_match C5AR1 ENST00000355085.3 2311 2 -13 11 no_subtype FALSE canonical NA NA 38 None 9 12 0 FALSE 0 0 NA A coding 350 1050 36 1085 PB.1297.1 chr2 + 2839 1 genic_intron novelGene_421 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8318.1 chr15 + 3277 1 genic_intron novelGene_894 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3502.7 chr5 - 2778 19 novel_in_catalog BRD8 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 36 None 3 4 0 FALSE 0 0 NA C coding 522 1566 905 2470 PB.7845.1 chr14 - 2966 20 novel_not_in_catalog GALC novel NA NA NA NA no_subtype TRUE non_canonical NA NA 213 None 6 9 0 TRUE 0 0 NA A coding 685 2055 19 2073 PB.3502.6 chr5 - 2958 21 full-splice_match BRD8 ENST00000402931.5 2982 21 3 21 no_subtype FALSE canonical NA NA 35 None 6 5 0 FALSE 0 0 NA C coding 878 2634 17 2650 PB.60.1 chr1 + 2962 20 novel_not_in_catalog PLOD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2074 None 56 2 0 TRUE 0 0 NA A coding 727 2181 47 2227 PB.5100.2 chr8 - 2964 8 full-splice_match DERL1 ENST00000405944.7 1994 8 -170 -800 no_subtype FALSE canonical NA NA 323 None 2 13 1 FALSE 0 0 NA C coding 231 693 171 863 PB.2306.1 chr3 - 3499 1 genic_intron novelGene_690 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10955.2 chrX + 2782 5 novel_in_catalog SUV39H1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1214 None 2 9 0 FALSE 0 0 NA C coding 365 1095 24 1118 PB.4920.1 chr8 - 2471 9 full-splice_match LYPLA1 ENST00000316963.7 2585 9 100 14 no_subtype TRUE canonical NA NA 163 None 6 7 0 FALSE 0 0 NA A coding 225 675 110 784 PB.11094.3 chrX - 1835 5 novel_not_in_catalog MORF4L2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 75 None 2 4 2 TRUE 0 0 NA C coding 288 864 313 1176 PB.10955.1 chrX + 2688 6 full-splice_match SUV39H1 ENST00000376687.3 2871 6 181 2 no_subtype FALSE canonical NA NA 1114 None 16 4 0 FALSE 0 0 NA C coding 412 1236 10 1245 PB.11094.5 chrX - 1812 4 novel_in_catalog MORF4L2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 56 None 2 3 0 FALSE 0 0 NA C coding 288 864 293 1156 PB.11094.4 chrX - 1827 4 novel_in_catalog MORF4L2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 69 None 2 7 1 FALSE 0 0 NA C coding 288 864 306 1169 PB.4852.7 chr8 + 5778 1 genic_intron novelGene_270 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 31 0 FALSE 0 0 NA A coding 118 354 3589 3942 PB.10444.1 chr20 - 3582 1 incomplete-splice_match ADNP ENST00000396032.7 4581 4 950 50 no_subtype FALSE canonical NA NA NA None 8 7 0 FALSE 0 0 NA C coding 834 2502 26 2527 PB.10444.2 chr20 - 5588 3 full-splice_match ADNP ENST00000371602.8 6115 3 389 138 no_subtype FALSE canonical NA NA 39 None 2 19 1 FALSE 0 0 NA C coding 874 2622 616 3237 PB.2893.1 chr4 - 1564 8 novel_not_in_catalog CCNI novel NA NA NA NA no_subtype FALSE canonical NA NA 501 None 264 4 0 TRUE 0 0 NA B coding 340 1020 545 1564 PB.2893.3 chr4 - 1654 6 novel_not_in_catalog CCNI novel NA NA NA NA no_subtype FALSE canonical NA NA 505 None 4 8 0 TRUE 0 0 NA B coding 305 915 549 1463 PB.2893.5 chr4 - 1701 7 novel_not_in_catalog CCNI novel NA NA NA NA no_subtype TRUE non_canonical NA NA 520 None 2 9 2 TRUE 0 0 NA B coding 189 567 946 1512 PB.4317.1 chr7 - 1543 2 novel_not_in_catalog MACC1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1170 None 5 6 0 TRUE 0 0 NA A coding 66 198 155 352 PB.2893.6 chr4 - 1653 7 novel_not_in_catalog CCNI novel NA NA NA NA no_subtype FALSE canonical NA NA 521 None 2 7 1 TRUE 0 0 NA B coding 300 900 565 1464 PB.2893.8 chr4 - 1647 7 novel_not_in_catalog CCNI novel NA NA NA NA no_subtype FALSE non_canonical NA NA 521 None 3 7 2 TRUE 0 0 NA B coding 228 684 843 1526 PB.8988.4 chr17 + 1414 6 incomplete-splice_match WSB1 ENST00000467843.6 4187 9 62 2711 3prime_fragment FALSE canonical NA NA 952 None 5 3 0 FALSE 0 0 NA C coding 244 732 242 973 PB.8988.2 chr17 + 1422 2 novel_not_in_catalog WSB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 406 None 5 14 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.8988.3 chr17 + 2978 10 novel_not_in_catalog WSB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1564 None 2 18 1 FALSE 0 0 NA C coding 244 732 283 1014 PB.8988.1 chr17 + 2601 9 full-splice_match WSB1 ENST00000262394.6 5139 9 235 2303 no_subtype FALSE canonical NA NA 1187 None 81 13 0 FALSE 0 0 NA C coding 421 1263 82 1344 PB.10949.1 chrX + 1307 7 novel_not_in_catalog EBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 828 None 5 5 2 TRUE 0 0 NA A coding 230 690 360 1049 PB.9967.1 chr19 + 1472 7 full-splice_match SPINT2 ENST00000301244.11 1802 7 187 143 no_subtype FALSE canonical NA NA 840 None 127 2 0 FALSE 0 0 NA A coding 252 756 249 1004 PB.9615.2 chr18 - 5456 4 novel_not_in_catalog MBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2765 None 2 48 2 TRUE 0 0 NA B coding 124 372 2254 2625 PB.3233.1 chr5 + 1480 2 antisense novelGene_CCL28_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 640 None 2 12 1 FALSE 0 0 NA A coding 140 420 952 1371 PB.9615.4 chr18 - 1476 4 novel_not_in_catalog MBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 204 None 50 13 1 FALSE 0 0 NA B coding 197 591 240 830 PB.9615.5 chr18 - 1464 4 novel_not_in_catalog MBP novel NA NA NA NA no_subtype FALSE canonical NA NA 204 None 42 9 1 FALSE 0 0 NA B coding 197 591 221 811 PB.9615.6 chr18 - 2573 1 antisense novelGene_RP11-4B16.4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 15 0 FALSE 0 0 NA A coding 160 480 1722 2201 PB.335.5 chr1 - 3683 22 novel_not_in_catalog HECTD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 461 None 2 9 0 TRUE 0 0 NA C coding 888 2664 93 2756 PB.3405.2 chr5 + 2762 22 novel_not_in_catalog FER novel NA NA NA NA no_subtype FALSE canonical NA NA 2533 None 2 3 1 TRUE 0 0 NA B coding 822 2466 208 2673 PB.3405.1 chr5 + 3259 6 novel_not_in_catalog FER novel NA NA NA NA no_subtype FALSE canonical NA NA 855 None 4 16 2 TRUE 0 0 NA B coding 165 495 325 819 PB.9086.1 chr17 - 1663 10 full-splice_match PIP4K2B ENST00000619039.4 5734 10 386 3685 no_subtype TRUE canonical NA NA 254 None 8 1 0 FALSE 0 0 NA A coding 416 1248 96 1343 PB.335.1 chr1 - 3623 21 full-splice_match HECTD3 ENST00000372172.4 3610 21 -15 2 no_subtype FALSE canonical NA NA 456 None 7 8 0 FALSE 0 0 NA C coding 861 2583 88 2670 PB.335.3 chr1 - 3573 22 novel_not_in_catalog HECTD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 432 None 43 7 0 TRUE 0 0 NA C coding 861 2583 64 2646 PB.335.2 chr1 - 3806 21 novel_not_in_catalog HECTD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 451 None 11 12 0 TRUE 0 0 NA C coding 380 1140 1740 2879 PB.664.2 chr1 - 1771 8 novel_not_in_catalog CTSK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 209 None 2 5 0 TRUE 0 0 NA C coding 329 987 214 1200 PB.7877.1 chr14 - 3300 14 novel_not_in_catalog ITPK1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 152 None 2 16 3 TRUE 0 0 NA B coding 406 1218 295 1512 PB.3706.1 chr5 - 2840 1 full-splice_match TRIM52 ENST00000612671.1 4753 1 3144 -1231 no_subtype FALSE canonical NA NA NA None 9 20 0 FALSE 0 0 NA C coding 105 315 1783 2097 PB.7877.3 chr14 - 2989 10 novel_not_in_catalog ITPK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 174 None 2 8 0 TRUE 0 0 NA B coding 295 885 412 1296 PB.10350.1 chr20 + 1957 6 antisense novelGene_NFS1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1753 None 2 4 1 FALSE 0 0 NA A coding 124 372 553 924 PB.7877.5 chr14 - 3053 11 novel_not_in_catalog ITPK1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 237 None 2 12 1 TRUE 0 0 NA B coding 295 885 480 1364 PB.7877.6 chr14 - 3756 2 novel_not_in_catalog ITPK1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3272 None 5 20 0 TRUE 0 0 NA B coding 124 372 1821 2192 PB.7877.7 chr14 - 6121 1 genic_intron novelGene_854 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 30 0 FALSE 0 0 NA A coding 120 360 604 963 PB.7414.1 chr13 - 2803 5 full-splice_match UBL3 ENST00000380680.4 4384 5 311 1270 no_subtype FALSE canonical NA NA 862 None 36 16 0 FALSE 0 0 NA A coding 117 351 836 1186 PB.6611.1 chr11 - 1966 10 full-splice_match MMP1 ENST00000315274.6 1970 10 -27 31 no_subtype FALSE canonical NA NA 200 None 10 3 0 FALSE 0 0 NA A coding 469 1407 96 1502 PB.2174.3 chr3 - 1725 7 novel_not_in_catalog UQCRC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 78 None 2 7 2 TRUE 0 0 NA C coding 237 711 10 720 PB.4391.1 chr7 + 3032 2 novel_in_catalog MRPL32 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 140 None 13 16 0 FALSE 0 0 NA A coding 107 321 11 331 PB.3293.1 chr5 - 2817 11 full-splice_match TRIM23 ENST00000231524.13 4186 11 349 1020 no_subtype FALSE canonical NA NA 104 None 15 8 0 FALSE 0 0 NA A coding 574 1722 24 1745 PB.705.1 chr1 - 1373 1 antisense novelGene_IL6R_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 15 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6687.1 chr11 - 1587 1 full-splice_match H2AFX ENST00000530167.1 1614 1 -1 28 no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A coding 143 429 75 503 PB.7959.74 chr14 - 1499 8 fusion IGHA1,CH17-262H11.1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 93 None 2 13 5 TRUE 0 0 NA B coding 254 762 692 1453 PB.801.1 chr1 - 1661 6 full-splice_match DEDD ENST00000368006.7 2345 6 1 683 no_subtype FALSE canonical NA NA 117 None 10 7 0 FALSE 0 0 NA A coding 318 954 215 1168 PB.3098.4 chr4 + 3127 3 genic TLR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 131 None 2 4 0 FALSE 0 0 NA B coding 784 2352 148 2499 PB.876.1 chr1 + 2866 21 full-splice_match RABGAP1L ENST00000251507.8 2899 21 35 -2 no_subtype FALSE canonical NA NA 2572 None 49 3 0 FALSE 0 0 NA C coding 815 2445 140 2584 PB.6692.1 chr11 - 3057 12 full-splice_match USP2 ENST00000525735.1 1704 12 -36 -1317 no_subtype FALSE canonical NA NA 395 None 2 20 0 FALSE 0 0 NA A coding 396 1188 249 1436 PB.3098.1 chr4 + 2648 3 genic TLR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 137 None 59 1 0 FALSE 0 0 NA B coding 784 2352 154 2505 PB.1356.3 chr2 + 1513 1 genic_intron novelGene_578 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A coding 150 450 923 1372 PB.8400.1 chr16 + 2633 1 antisense novelGene_ZNF597_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1356.1 chr2 + 2509 10 full-splice_match REL ENST00000394479.3 2398 10 -54 -57 no_subtype FALSE canonical NA NA 1230 None 13 6 0 FALSE 0 0 NA A coding 587 1761 240 2000 PB.4778.1 chr8 + 1617 11 novel_not_in_catalog FBXO25 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1252 None 2 8 1 TRUE 0 0 NA A coding 358 1074 266 1339 PB.3047.1 chr4 + 3550 2 full-splice_match RAB33B ENST00000305626.5 4562 2 309 703 no_subtype FALSE canonical NA NA 329 None 7 22 0 FALSE 0 0 NA A coding 229 687 81 767 PB.3738.7 chr6 - 1504 1 novel_in_catalog NEDD9 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3738.2 chr6 - 2981 7 full-splice_match NEDD9 ENST00000379446.9 4536 7 14 1541 no_subtype FALSE canonical NA NA 165 None 61 7 0 FALSE 0 0 NA C coding 834 2502 154 2655 PB.3738.3 chr6 - 3177 8 full-splice_match NEDD9 ENST00000504387.5 3211 8 0 34 no_subtype FALSE canonical NA NA 210 None 20 10 0 FALSE 0 0 NA C coding 834 2502 363 2864 PB.4726.1 chr7 - 3291 18 full-splice_match EPHA1 ENST00000275815.3 3363 18 47 25 no_subtype FALSE canonical NA NA 122 None 3 5 1 FALSE 0 0 NA A coding 976 2928 41 2968 PB.7959.70 chr14 - 1447 7 fusion IGHV5-51,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 87 None 4 13 4 TRUE 0 0 NA B coding 275 825 42 866 PB.1785.2 chr2 + 2808 1 novel_in_catalog SATB2-AS1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2471.3 chr3 - 1578 13 novel_not_in_catalog MRPL3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 151 None 2 5 2 TRUE 0 0 NA B coding 348 1044 60 1103 PB.2287.1 chr3 + 3910 2 incomplete-splice_match KBTBD8 ENST00000417314.2 4680 4 762 8 internal_fragment FALSE canonical NA NA 629 None 2 14 0 FALSE 0 0 NA A coding 357 1071 20 1090 PB.4385.1 chr7 + 2874 7 novel_not_in_catalog RALA novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2510 None 2 22 1 TRUE 0 0 NA B coding 206 618 407 1024 PB.1865.2 chr2 + 4191 19 novel_in_catalog TTLL4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3640 None 3 2 0 FALSE 0 0 NA B coding 1199 3597 297 3893 PB.3283.1 chr5 + 2686 2 genic_intron novelGene_584 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 842 None 2 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4385.2 chr7 + 2748 7 novel_not_in_catalog RALA novel NA NA NA NA no_subtype FALSE canonical NA NA 2378 None 47 16 1 TRUE 0 0 NA B coding 206 618 269 886 PB.7867.1 chr14 + 2904 16 novel_not_in_catalog CPSF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2492 None 20 3 1 FALSE 0 0 NA B coding 782 2346 237 2582 PB.3607.2 chr5 - 2972 9 full-splice_match FAXDC2 ENST00000326080.9 3251 9 267 12 no_subtype FALSE canonical NA NA 157 None 47 11 0 FALSE 0 0 NA C coding 333 999 158 1156 PB.613.4 chr1 - 7074 13 incomplete-splice_match NOTCH2 ENST00000256646.6 11389 34 3784 531 5prime_fragment FALSE canonical NA NA 91 None 4 15 0 FALSE 0 0 NA B coding 1230 3690 160 3849 PB.1381.1 chr2 - 1415 6 full-splice_match RAB1A ENST00000409784.7 2447 6 1 1031 no_subtype FALSE canonical NA NA 213 None 21 0 0 FALSE 0 0 NA C coding 205 615 191 805 PB.2017.1 chr3 + 3128 13 novel_not_in_catalog TMEM43 novel NA NA NA NA no_subtype FALSE canonical NA NA 1049 None 116 10 0 TRUE 0 0 NA B coding 400 1200 50 1249 PB.2017.2 chr3 + 3088 12 novel_not_in_catalog TMEM43 novel NA NA NA NA no_subtype FALSE canonical NA NA 1008 None 3 10 0 TRUE 0 0 NA B coding 350 1050 159 1208 PB.3826.2 chr6 - 1823 7 novel_not_in_catalog NEU1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 267 None 15 6 1 TRUE 0 0 NA B coding 415 1245 109 1353 PB.7959.108 chr14 - 1519 9 fusion IGHV5-51,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 103 None 2 16 3 TRUE 0 0 NA B coding 261 783 692 1474 PB.3826.1 chr6 - 1835 8 novel_not_in_catalog NEU1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 267 None 11 7 2 TRUE 0 0 NA B coding 415 1245 109 1353 PB.5117.1 chr8 + 2839 3 full-splice_match TRIB1 ENST00000311922.3 3635 3 788 8 no_subtype FALSE canonical NA NA 447 None 4 11 0 FALSE 0 0 NA A coding 206 618 293 910 PB.3966.1 chr6 + 957 5 full-splice_match TMEM14A ENST00000211314.4 992 5 31 4 no_subtype FALSE canonical NA NA 382 None 2 1 0 FALSE 0 0 NA A coding 99 297 123 419 PB.7959.102 chr14 - 1495 7 fusion IGHA1,IGHV1-3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 94 None 2 17 3 TRUE 0 0 NA B coding 289 867 49 915 PB.7959.103 chr14 - 1519 7 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 2 25 3 TRUE 0 0 NA B coding 466 1398 77 1474 PB.7959.100 chr14 - 1478 7 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 14 2 TRUE 0 0 NA B coding 254 762 672 1433 PB.10467.3 chr20 + 3283 16 novel_not_in_catalog NELFCD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2829 None 2 10 1 TRUE 0 0 NA B coding 442 1326 1536 2861 PB.7959.107 chr14 - 1482 8 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 120 None 2 12 4 TRUE 0 0 NA B coding 251 753 685 1437 PB.7959.104 chr14 - 1457 8 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 22 5 TRUE 0 0 NA B coding 251 753 660 1412 PB.6979.1 chr12 - 2704 12 novel_in_catalog GALNT6 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 36 None 8 6 0 FALSE 0 0 NA B coding 614 1842 255 2096 PB.10466.1 chr20 + 1622 14 novel_not_in_catalog GNAS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1123 None 4 3 0 TRUE 0 0 NA C coding 394 1182 86 1267 PB.10466.3 chr20 + 1604 14 novel_not_in_catalog GNAS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1100 None 3 2 1 TRUE 0 0 NA C coding 394 1182 63 1244 PB.3967.1 chr6 - 6122 14 novel_not_in_catalog ICK novel NA NA NA NA no_subtype FALSE canonical NA NA 206 None 2 22 1 FALSE 0 0 NA A coding 450 1350 379 1728 PB.7652.1 chr14 + 3910 2 incomplete-splice_match ARHGAP5 ENST00000556611.5 4824 7 41 873 3prime_fragment FALSE canonical NA NA 46 None 4 2 0 FALSE 0 0 NA B coding 1231 3693 218 3910 PB.7652.3 chr14 + 3694 1 incomplete-splice_match ARHGAP5 ENST00000556611.5 4824 7 262 869 no_subtype FALSE canonical NA NA NA None 2 0 0 FALSE 0 0 NA B coding 1103 3309 384 3692 PB.7652.2 chr14 + 3999 2 incomplete-splice_match ARHGAP5 ENST00000345122.7 9604 7 17 5588 3prime_fragment FALSE canonical NA NA 130 None 3 0 0 FALSE 0 0 NA B coding 1232 3696 302 3997 PB.769.5 chr1 + 2445 6 novel_in_catalog MNDA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2138 None 69 10 1 FALSE 0 0 NA C coding 173 519 1665 2183 PB.10466.8 chr20 + 1481 13 full-splice_match GNAS ENST00000371085.7 1972 13 485 6 no_subtype FALSE canonical NA NA 977 None 9 3 1 FALSE 0 0 NA C coding 335 1005 117 1121 PB.5498.1 chr9 + 2680 1 genic_intron novelGene_1083 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.612.1 chr1 - 2022 10 full-splice_match HMGCS2 ENST00000369406.7 2428 10 17 389 no_subtype FALSE canonical NA NA 137 None 8 0 0 FALSE 0 0 NA A coding 508 1524 34 1557 PB.3730.1 chr6 + 2921 10 novel_not_in_catalog SNRNP48 novel NA NA NA NA no_subtype FALSE canonical NA NA 1164 None 4 23 1 TRUE 0 0 NA B coding 339 1017 38 1054 PB.3730.2 chr6 + 2869 10 novel_not_in_catalog SNRNP48 novel NA NA NA NA no_subtype TRUE canonical NA NA 2833 None 2 14 1 TRUE 0 0 NA B coding 144 432 44 475 PB.795.13 chr1 - 3544 4 genic_intron novelGene_1279 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 582 None 21 20 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.795.12 chr1 - 3572 5 genic_intron novelGene_1279 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 572 None 17 24 4 FALSE 0 0 NA B non_coding NA NA NA NA PB.795.10 chr1 - 3152 4 novel_not_in_catalog CD48 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 155 None 2 15 1 TRUE 0 0 NA C coding 252 756 74 829 PB.2876.3 chr4 - 689 3 full-splice_match PPBP ENST00000296028.3 715 3 7 19 no_subtype FALSE canonical NA NA 235 None 14 0 0 FALSE 0 0 NA C coding 128 384 88 471 PB.2876.1 chr4 - 2312 4 novel_not_in_catalog PPBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 235 None 15 5 0 TRUE 0 0 NA C coding 128 384 88 471 PB.7161.1 chr12 + 2055 3 full-splice_match SOCS2 ENST00000536696.6 1065 3 5 -995 no_subtype FALSE canonical NA NA 584 None 2 7 0 FALSE 0 0 NA C coding 198 594 446 1039 PB.7161.2 chr12 + 1989 1 incomplete-splice_match SOCS2 ENST00000548537.1 3733 2 1738 7 no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA C coding 146 438 528 965 PB.1409.1 chr2 + 1770 10 incomplete-splice_match MPHOSPH10 ENST00000244230.6 2484 11 315 399 3prime_fragment FALSE canonical NA NA 1702 None 2 1 0 FALSE 0 0 NA A coding 577 1731 38 1768 PB.8783.1 chr16 + 5467 2 novel_not_in_catalog CRISPLD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1506 None 2 28 0 TRUE 0 0 NA B coding 116 348 4637 4984 PB.2593.2 chr3 - 3838 1 novel_in_catalog TNFSF10 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 7 20 0 FALSE 0 0 NA C coding 93 279 50 328 PB.3710.1 chr6 - 1434 7 full-splice_match SERPINB1 ENST00000380739.5 2619 7 7 1178 no_subtype FALSE canonical NA NA 188 None 63 2 0 FALSE 0 0 NA A coding 379 1137 197 1333 PB.4742.2 chr7 + 1897 2 novel_in_catalog GIMAP4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 75 None 10 5 0 FALSE 0 0 NA C coding 329 987 18 1004 PB.9534.1 chr18 - 905 5 full-splice_match INO80C ENST00000334598.11 974 5 62 7 no_subtype FALSE canonical NA NA 211 None 3 3 0 FALSE 0 0 NA A coding 192 576 56 631 PB.4742.1 chr7 + 1940 3 full-splice_match GIMAP4 ENST00000255945.3 2060 3 116 4 no_subtype FALSE canonical NA NA 117 None 64 21 0 FALSE 0 0 NA C coding 329 987 60 1046 PB.1138.3 chr1 + 2879 4 novel_not_in_catalog MTR novel NA NA NA NA no_subtype FALSE canonical NA NA 1826 None 2 14 0 TRUE 0 0 NA B coding 138 414 676 1089 PB.3616.1 chr5 - 2764 2 antisense novelGene_CYFIP2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 158 None 2 15 0 FALSE 0 0 NA B coding 11 33 435 467 PB.10868.2 chrX + 1700 2 full-splice_match TMSB4X ENST00000380636.1 1702 2 0 2 no_subtype FALSE canonical NA NA 1252 None 13 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10868.1 chrX + 624 3 full-splice_match TMSB4X ENST00000451311.6 628 3 2 2 no_subtype FALSE canonical NA NA 175 None 61 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10190.1 chr19 - 3084 4 full-splice_match ZNF416 ENST00000196489.3 2561 4 19 -542 no_subtype FALSE canonical NA NA 237 None 7 8 0 FALSE 0 0 NA A coding 594 1782 205 1986 PB.2471.4 chr3 - 1629 15 novel_not_in_catalog MRPL3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 222 None 6 8 4 TRUE 0 0 NA B coding 348 1044 131 1174 PB.4645.4 chr7 + 1480 1 incomplete-splice_match CALU ENST00000535011.6 3210 6 1725 6 no_subtype FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA C coding 201 603 325 927 PB.778.5 chr1 - 5907 5 novel_not_in_catalog TAGLN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 181 None 2 45 3 TRUE 0 0 NA B coding 179 537 4008 4544 PB.778.6 chr1 - 3698 3 novel_not_in_catalog TAGLN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1869 None 7 27 2 TRUE 0 0 NA B coding 185 555 1565 2119 PB.778.1 chr1 - 1359 5 novel_not_in_catalog TAGLN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 58 None 256 3 0 FALSE 0 0 NA B coding 199 597 77 673 PB.778.2 chr1 - 1381 5 novel_not_in_catalog TAGLN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 69 None 3 2 0 FALSE 0 0 NA B coding 199 597 98 694 PB.778.3 chr1 - 1338 5 novel_not_in_catalog TAGLN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 40 None 7 3 0 TRUE 0 0 NA B coding 199 597 55 651 PB.9282.1 chr17 + 1343 9 full-splice_match METTL2A ENST00000311506.9 2537 9 32 1162 no_subtype TRUE canonical NA NA 986 None 8 3 0 FALSE 0 0 NA A coding 378 1134 5 1138 PB.868.1 chr1 - 2933 1 genic_intron novelGene_1327 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8462.1 chr16 - 1453 3 novel_not_in_catalog XYLT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 236 None 2 9 1 TRUE 0 0 NA B coding 35 105 237 341 PB.7277.1 chr12 - 3051 20 full-splice_match DDX54 ENST00000314045.11 4380 20 5 1324 no_subtype FALSE canonical NA NA 197 None 83 2 0 FALSE 0 0 NA A coding 866 2598 72 2669 PB.5868.1 chr10 + 5764 2 genic_intron novelGene_735 novel NA NA NA NA no_subtype FALSE canonical NA NA 3316 None 3 25 1 FALSE 0 0 NA A coding 203 609 3351 3959 PB.4232.1 chr6 + 1820 1 antisense novelGene_SOD2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1613.1 chr2 + 1620 14 full-splice_match KYNU ENST00000264170.8 15316 14 166 13530 no_subtype FALSE canonical NA NA 1364 None 26 0 0 FALSE 0 0 NA A coding 465 1395 93 1487 PB.6134.1 chr11 - 1476 1 genic AC132217.4 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 10 11 0 FALSE 0 0 NA A coding 113 339 881 1219 PB.1897.1 chr2 - 3926 2 full-splice_match IRS1 ENST00000305123.5 9705 2 1037 4742 no_subtype FALSE canonical NA NA 3734 None 2 3 0 FALSE 0 0 NA A coding 1218 3654 57 3710 PB.6781.2 chr12 + 2086 10 novel_in_catalog LTBR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1181 None 3 4 1 FALSE 0 0 NA C coding 430 1290 167 1456 PB.6781.1 chr12 + 2068 10 full-splice_match LTBR ENST00000228918.8 2260 10 192 0 no_subtype FALSE canonical NA NA 1164 None 21 3 0 FALSE 0 0 NA C coding 435 1305 135 1439 PB.4032.1 chr6 - 1493 1 incomplete-splice_match BACH2 ENST00000537989.5 9108 7 3887 3729 no_subtype FALSE canonical NA NA NA None 4 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4433.1 chr7 + 3170 4 full-splice_match ZNF92 ENST00000328747.11 3210 4 41 -1 no_subtype FALSE canonical NA NA 384 None 14 20 0 FALSE 0 0 NA C coding 586 1758 159 1916 PB.4065.1 chr6 + 2672 1 genic_intron novelGene_979 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 22 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4433.3 chr7 + 3007 3 incomplete-splice_match ZNF92 ENST00000328747.11 3210 4 204 -1 internal_fragment FALSE canonical NA NA 221 None 4 16 0 FALSE 0 0 NA C coding 554 1662 92 1753 PB.4433.2 chr7 + 1743 2 novel_not_in_catalog ZNF92 novel NA NA NA NA no_subtype FALSE canonical NA NA 1422 None 2 9 0 TRUE 0 0 NA C coding 103 309 160 468 PB.1186.1 chr2 + 3997 4 full-splice_match KLF11 ENST00000305883.5 4030 4 25 8 no_subtype TRUE canonical NA NA 1395 None 13 23 0 FALSE 0 0 NA A coding 512 1536 138 1673 PB.4418.17 chr7 + 2683 1 incomplete-splice_match IKZF1 ENST00000346667.8 5376 3 1771 923 no_subtype FALSE canonical NA NA NA None 6 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1162.1 chr1 - 1769 5 novel_not_in_catalog ZNF669 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 108 None 2 26 2 TRUE 0 0 NA B coding 341 1023 156 1178 PB.4848.2 chr8 + 5880 3 novel_not_in_catalog PPP2R2A novel NA NA NA NA no_subtype FALSE canonical NA NA 2046 None 2 44 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.4848.1 chr8 + 3896 10 full-splice_match PPP2R2A ENST00000380737.7 3940 10 38 6 no_subtype FALSE canonical NA NA 1355 None 11 17 0 FALSE 0 0 NA C coding 447 1341 292 1632 PB.7109.1 chr12 + 1181 5 novel_not_in_catalog LYZ novel NA NA NA NA no_subtype FALSE canonical NA NA 742 None 61 3 0 TRUE 0 0 NA A coding 148 444 27 470 PB.4418.14 chr7 + 3068 4 novel_in_catalog IKZF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 430 None 2 5 0 FALSE 0 0 NA B coding 290 870 268 1137 PB.1162.7 chr1 - 1665 3 novel_not_in_catalog ZNF669 novel NA NA NA NA no_subtype FALSE canonical NA NA 140 None 2 15 1 TRUE 0 0 NA B coding 222 666 418 1083 PB.1162.6 chr1 - 1406 4 novel_not_in_catalog ZNF669 novel NA NA NA NA no_subtype FALSE canonical NA NA 107 None 4 6 1 TRUE 0 0 NA B coding 341 1023 155 1177 PB.9109.4 chr17 + 1844 2 genic_intron novelGene_401 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 587 None 3 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9109.6 chr17 + 2831 12 full-splice_match CDC6 ENST00000209728.8 4810 12 238 1741 no_subtype FALSE canonical NA NA 1826 None 5 6 0 FALSE 0 0 NA A coding 560 1680 234 1913 PB.9109.7 chr17 + 3356 9 full-splice_match RARA ENST00000394089.6 2024 9 -23 -1309 no_subtype FALSE canonical NA NA 1724 None 10 13 0 FALSE 0 0 NA C coding 462 1386 554 1939 PB.8864.1 chr17 + 3440 26 novel_not_in_catalog PLD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2650 None 5 6 0 TRUE 0 0 NA A coding 933 2799 74 2872 PB.9109.1 chr17 + 5501 10 novel_not_in_catalog WIPF2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3274 None 3 30 2 TRUE 0 0 NA B coding 440 1320 379 1698 PB.6886.1 chr12 + 3523 13 novel_not_in_catalog FAR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1549 None 20 14 0 TRUE 0 0 NA A coding 515 1545 165 1709 PB.7608.19 chr14 + 1376 8 fusion TRAC,TRAV12-3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 830 None 2 15 3 TRUE 0 0 NA B coding 182 546 281 826 PB.7608.17 chr14 + 1471 7 fusion TRAC,TRAV12-3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 925 None 4 8 2 TRUE 0 0 NA B coding 127 381 112 492 PB.7608.15 chr14 + 1398 7 fusion TRAC,TRAV9-2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 861 None 3 3 1 TRUE 0 0 NA A coding 265 795 63 857 PB.7608.12 chr14 + 1502 7 fusion TRAV8-4,TRAC novel NA NA NA NA no_subtype FALSE canonical NA NA 954 None 2 7 2 TRUE 0 0 NA B coding 144 432 130 561 PB.9109.9 chr17 + 3095 8 full-splice_match RARA ENST00000394081.7 2285 8 36 -846 no_subtype FALSE canonical NA NA 1462 None 11 28 2 FALSE 0 0 NA C coding 457 1371 307 1677 PB.7608.10 chr14 + 1570 8 fusion TRAV8-4,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1024 None 6 10 2 TRUE 0 0 NA B coding 136 408 204 611 PB.7608.11 chr14 + 1521 8 fusion TRAV8-4,TRAC novel NA NA NA NA no_subtype TRUE non_canonical NA NA 978 None 2 6 1 TRUE 0 0 NA B coding 131 393 173 565 PB.2001.1 chr3 + 3756 2 genic_intron novelGene_90 novel NA NA NA NA no_subtype TRUE canonical NA NA 3526 None 3 20 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1520.1 chr2 + 3624 3 novel_not_in_catalog MAP4K4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1773 None 2 25 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.4447.1 chr7 - 1446 1 novel_in_catalog BAZ1B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8549.3 chr16 + 1360 9 full-splice_match ALDOA ENST00000564546.5 2104 9 735 9 no_subtype FALSE canonical NA NA 1065 None 945 1 0 FALSE 0 0 NA C coding 364 1092 67 1158 PB.8549.2 chr16 + 1402 9 full-splice_match ALDOA ENST00000563060.6 1550 9 145 3 no_subtype FALSE canonical NA NA 1107 None 3 0 0 FALSE 0 0 NA C coding 364 1092 109 1200 PB.8549.1 chr16 + 1422 10 incomplete-splice_match ALDOA ENST00000338110.9 2384 14 959 3 internal_fragment FALSE canonical NA NA 1127 None 46 2 0 FALSE 0 0 NA C coding 364 1092 129 1220 PB.6789.4 chr12 + 2637 7 novel_in_catalog CD4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1134 None 2 8 0 FALSE 0 0 NA C coding 185 555 608 1162 PB.6789.3 chr12 + 2916 9 novel_in_catalog CD4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1415 None 2 6 0 FALSE 0 0 NA C coding 458 1374 70 1443 PB.6789.1 chr12 + 2951 10 full-splice_match CD4 ENST00000011653.8 3114 10 151 12 no_subtype FALSE canonical NA NA 1453 None 107 8 0 FALSE 0 0 NA C coding 458 1374 108 1481 PB.8549.4 chr16 + 2730 8 novel_in_catalog ALDOA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2436 None 4 8 0 FALSE 0 0 NA C coding 364 1092 1438 2529 PB.214.7 chr1 - 3928 22 novel_in_catalog PUM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 89 None 8 1 1 FALSE 0 0 NA C coding 1159 3477 101 3577 PB.214.6 chr1 - 3785 21 novel_not_in_catalog PUM1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 80 None 5 3 2 TRUE 0 0 NA C coding 969 2907 528 3434 PB.214.5 chr1 - 3315 19 novel_not_in_catalog PUM1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 79 None 2 0 0 TRUE 0 0 NA C coding 958 2874 91 2964 PB.8454.3 chr16 + 4104 25 novel_not_in_catalog PDXDC1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2435 None 6 20 0 TRUE 0 0 NA C coding 802 2406 287 2692 PB.8986.4 chr17 + 3615 1 novel_in_catalog MAP2K3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA B coding 117 351 181 531 PB.8986.5 chr17 + 3592 2 novel_not_in_catalog MAP2K3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 832 None 5 16 1 TRUE 0 0 NA B coding 108 324 826 1149 PB.9850.1 chr19 - 3214 25 novel_not_in_catalog EPS15L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 59 None 2 7 0 TRUE 0 0 NA C coding 819 2457 27 2483 PB.3336.1 chr5 + 3399 3 novel_not_in_catalog F2R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3123 None 12 11 0 TRUE 0 0 NA A coding 425 1275 165 1439 PB.2533.1 chr3 - 697 3 full-splice_match SERP1 ENST00000239944.6 3171 3 245 2229 no_subtype FALSE canonical NA NA 345 None 60 0 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4011.1 chr6 - 1828 11 novel_not_in_catalog UBE3D novel NA NA NA NA no_subtype TRUE canonical NA NA 108 None 3 2 0 TRUE 0 0 NA A coding 389 1167 32 1198 PB.4177.4 chr6 + 5583 2 novel_not_in_catalog STX11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3571 None 2 21 0 TRUE 0 0 NA C coding 287 861 3850 4710 PB.214.9 chr1 - 4027 22 full-splice_match PUM1 ENST00000426105.6 4043 22 -22 38 no_subtype FALSE canonical NA NA 102 None 52 0 0 FALSE 0 0 NA C coding 1188 3564 114 3677 PB.214.8 chr1 - 3998 22 novel_in_catalog PUM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 79 None 48 0 0 FALSE 0 0 NA C coding 1187 3561 91 3651 PB.6795.1 chr12 - 1360 9 novel_in_catalog PHB2 novel NA NA NA NA no_combination_of_known_junctions FALSE non_canonical NA NA 267 None 33 2 1 FALSE 0 0 NA B coding 317 951 141 1091 PB.6795.2 chr12 - 2854 7 novel_in_catalog PHB2 novel NA NA NA NA no_combination_of_known_junctions FALSE non_canonical NA NA 236 None 2 22 1 FALSE 0 0 NA B coding 217 651 1930 2580 PB.10077.1 chr19 - 2964 1 incomplete-splice_match ZC3H4 ENST00000601973.1 4895 8 1930 2 no_subtype FALSE canonical NA NA NA None 4 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8529.2 chr16 - 1565 10 full-splice_match TUFM ENST00000313511.7 2071 10 116 390 no_subtype FALSE canonical NA NA 75 None 205 1 0 FALSE 0 0 NA A coding 452 1356 33 1388 PB.8394.6 chr16 + 3097 11 novel_not_in_catalog MMP25 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1820 None 2 25 3 TRUE 0 0 NA B coding 478 1434 75 1508 PB.8394.5 chr16 + 3518 11 novel_not_in_catalog MMP25 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2241 None 163 32 2 TRUE 0 0 NA B coding 562 1686 244 1929 PB.8394.4 chr16 + 2601 10 novel_not_in_catalog MMP25 novel NA NA NA NA no_subtype FALSE canonical NA NA 1774 None 3 6 0 FALSE 0 0 NA B coding 540 1620 358 1977 PB.8394.2 chr16 + 4071 10 novel_not_in_catalog MMP25 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2794 None 2 27 1 TRUE 0 0 NA B coding 498 1494 989 2482 PB.8394.1 chr16 + 3512 12 novel_not_in_catalog MMP25 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2235 None 2 19 1 TRUE 0 0 NA B coding 562 1686 238 1923 PB.8041.1 chr15 - 6158 30 novel_not_in_catalog TP53BP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 78 None 13 3 1 TRUE 0 0 NA A coding 1977 5931 72 6002 PB.800.7 chr1 - 3969 12 novel_not_in_catalog ARHGAP30 novel NA NA NA NA no_subtype FALSE canonical NA NA 166 None 4 6 0 FALSE 0 0 NA C coding 1044 3132 70 3201 PB.7040.1 chr12 - 2968 24 novel_not_in_catalog STAT2 novel NA NA NA NA no_subtype TRUE canonical NA NA 56 None 2 11 4 FALSE 0 0 NA A coding 605 1815 64 1878 PB.2647.1 chr3 - 3900 5 antisense novelGene_RP11-443P15.2_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 399 None 3 18 4 FALSE 0 0 NA A coding 112 336 3564 3899 PB.5107.2 chr8 + 3756 24 novel_not_in_catalog FAM91A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2570 None 7 7 1 FALSE 0 0 NA A coding 596 1788 966 2753 PB.10478.2 chr20 - 2753 7 novel_not_in_catalog DIDO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 90 None 66 9 0 TRUE 0 0 NA B coding 562 1686 290 1975 PB.3677.3 chr5 - 1800 7 novel_not_in_catalog DOK3 novel NA NA NA NA no_subtype TRUE canonical NA NA 45 None 33 3 1 TRUE 0 0 NA B coding 440 1320 248 1567 PB.1358.1 chr2 - 3346 18 novel_in_catalog PUS10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 144 None 2 5 0 FALSE 0 0 NA C coding 529 1587 160 1746 PB.1358.2 chr2 - 3227 18 full-splice_match PUS10 ENST00000407787.5 1820 18 13 -1420 no_subtype FALSE canonical NA NA 32 None 2 5 0 FALSE 0 0 NA C coding 529 1587 48 1634 PB.1633.11 chr2 - 2614 1 full-splice_match ZEB2 ENST00000625161.1 3061 1 1673 -1226 no_subtype FALSE canonical NA NA NA None 7 9 0 FALSE 0 0 NA C coding 114 342 1119 1460 PB.10747.1 chr22 + 2595 18 full-splice_match SH3BP1 ENST00000357436.4 2852 18 243 14 no_subtype FALSE canonical NA NA 1763 None 72 5 0 FALSE 0 0 NA A coding 701 2103 71 2173 PB.5699.1 chr10 + 2831 15 novel_not_in_catalog STAM novel NA NA NA NA no_subtype FALSE canonical NA NA 1472 None 30 9 0 TRUE 0 0 NA A coding 540 1620 88 1707 PB.4852.4 chr8 + 3530 23 novel_not_in_catalog PTK2B novel NA NA NA NA no_subtype FALSE canonical NA NA 2690 None 7 5 0 TRUE 0 0 NA B coding 524 1572 1305 2876 PB.4852.5 chr8 - 6630 2 genic_intron novelGene_269 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3822 None 12 23 1 FALSE 0 0 NA A coding 203 609 5502 6110 PB.4852.2 chr8 + 4088 32 novel_not_in_catalog PTK2B novel NA NA NA NA no_subtype FALSE canonical NA NA 2998 None 18 6 0 TRUE 0 0 NA B coding 1009 3027 185 3211 PB.4852.3 chr8 + 2989 2 incomplete-splice_match PTK2B ENST00000522338.5 539 4 201 -2651 internal_fragment FALSE canonical NA NA 96 None 10 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4852.1 chr8 + 3906 31 novel_not_in_catalog PTK2B novel NA NA NA NA no_subtype FALSE canonical NA NA 2815 None 98 7 0 TRUE 0 0 NA B coding 967 2901 128 3028 PB.5191.1 chr8 - 2731 4 novel_not_in_catalog ZNF16 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 171 None 3 5 1 TRUE 0 0 NA A coding 692 2076 304 2379 PB.1633.13 chr2 - 2780 3 full-splice_match ZEB2 ENST00000465070.5 2949 3 158 11 no_subtype FALSE canonical NA NA 236 None 6 5 0 FALSE 0 0 NA C coding 58 174 306 479 PB.2785.1 chr4 - 2543 5 incomplete-splice_match ARAP2 ENST00000303965.8 7514 33 4962 9 5prime_fragment FALSE canonical NA NA 36 None 2 21 0 FALSE 0 0 NA B coding 207 621 20 640 PB.3607.3 chr5 - 2800 6 novel_in_catalog FAXDC2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 224 None 15 11 0 FALSE 0 0 NA C coding 188 564 416 979 PB.9535.1 chr18 + 1875 12 novel_not_in_catalog GALNT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1720 None 2 3 0 FALSE 0 0 NA A coding 559 1677 188 1864 PB.913.1 chr1 - 1633 4 full-splice_match ARPC5 ENST00000359856.10 7209 4 -29 5605 no_subtype FALSE canonical NA NA 239 None 275 4 0 FALSE 0 0 NA A coding 151 453 97 549 PB.725.1 chr1 + 2090 9 novel_not_in_catalog RUSC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1382 None 3 9 0 TRUE 0 0 NA A coding 208 624 925 1548 PB.1259.1 chr2 - 2683 5 novel_not_in_catalog DPY30 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 61 None 3 15 0 TRUE 0 0 NA A coding 113 339 615 953 PB.6979.2 chr12 - 2938 16 novel_not_in_catalog GALNT6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 49 None 2 6 2 TRUE 0 0 NA B coding 614 1842 485 2326 PB.9826.1 chr19 - 1467 11 full-splice_match DDX39A ENST00000242776.8 1471 11 30 -26 no_subtype FALSE canonical NA NA 68 None 58 2 0 FALSE 0 0 NA A coding 427 1281 73 1353 PB.9088.1 chr17 - 1535 2 genic_intron novelGene_387 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 927 None 3 10 1 FALSE 0 0 NA A coding 104 312 184 495 PB.9088.2 chr17 - 3569 6 genic_intron novelGene_388 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 237 None 2 25 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.3786.1 chr6 - 2828 17 novel_not_in_catalog CMAHP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 33 None 2 19 4 TRUE 0 0 NA B coding 486 1458 334 1791 PB.5482.2 chr9 - 2047 7 full-splice_match STOM ENST00000286713.6 3010 7 -37 1000 no_subtype FALSE canonical NA NA 116 None 220 9 0 FALSE 0 0 NA C coding 288 864 56 919 PB.4039.1 chr6 + 3933 7 novel_not_in_catalog FHL5 novel NA NA NA NA no_subtype FALSE canonical NA NA 1407 None 3 17 1 TRUE 0 0 NA A coding 284 852 255 1106 PB.3786.4 chr6 - 2807 15 novel_not_in_catalog CMAHP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 308 None 26 6 0 TRUE 0 0 NA B coding 591 1773 298 2070 PB.4504.2 chr7 + 3076 3 genic_intron novelGene_846 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3002 None 6 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6649.4 chr11 - 5824 24 novel_not_in_catalog USP28 novel NA NA NA NA no_subtype FALSE canonical NA NA 117 None 3 22 0 TRUE 0 0 NA B coding 861 2583 437 3019 PB.4540.1 chr7 - 2758 7 novel_not_in_catalog TRIM4 novel NA NA NA NA no_subtype TRUE canonical NA NA 517 None 74 7 0 FALSE 0 0 NA A coding 474 1422 125 1546 PB.6649.2 chr11 - 2480 8 incomplete-splice_match USP28 ENST00000544967.5 3498 15 1230 -212 5prime_fragment FALSE canonical NA NA 146 None 2 15 0 FALSE 0 0 NA B coding 340 1020 98 1117 PB.1321.1 chr2 - 2740 7 novel_not_in_catalog MCFD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 46 None 40 13 2 TRUE 0 0 NA B coding 144 432 59 490 PB.8235.1 chr15 + 4052 11 full-splice_match IDH3A ENST00000299518.6 4128 11 62 14 no_subtype FALSE canonical NA NA 1038 None 88 16 0 FALSE 0 0 NA C coding 366 1098 22 1119 PB.1937.2 chr2 + 1590 8 full-splice_match COPS8 ENST00000354371.6 4007 8 632 1785 no_subtype FALSE canonical NA NA 571 None 52 4 0 FALSE 0 0 NA C coding 209 627 22 648 PB.4969.2 chr8 - 4195 28 novel_not_in_catalog TRPA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 81 None 2 19 2 TRUE 0 0 NA A coding 1088 3264 60 3323 PB.1633.2 chr2 - 5426 10 full-splice_match ZEB2 ENST00000627532.2 9541 10 172 3943 no_subtype FALSE canonical NA NA 285 None 2 8 0 FALSE 0 0 NA C coding 1209 3627 370 3996 PB.1027.1 chr1 - 4400 9 full-splice_match IRF6 ENST00000367021.7 4306 9 -98 4 no_subtype FALSE canonical NA NA 196 None 18 10 0 FALSE 0 0 NA A coding 467 1401 272 1672 PB.1937.4 chr2 + 2996 9 novel_not_in_catalog COPS8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2681 None 2 11 1 TRUE 0 0 NA C coding 209 627 21 647 PB.9593.1 chr18 - 5767 1 genic_intron novelGene_602 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 46 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1616.1 chr2 + 2731 1 genic_intron novelGene_1204 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4472.1 chr7 - 1305 1 incomplete-splice_match YWHAG ENST00000307630.4 3750 2 2438 8 no_subtype FALSE canonical NA NA NA None 7 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4472.2 chr7 - 3702 3 novel_not_in_catalog YWHAG novel NA NA NA NA no_subtype FALSE canonical NA NA 274 None 38 17 0 TRUE 0 0 NA B coding 247 741 184 924 PB.10473.2 chr20 + 3868 16 novel_not_in_catalog OSBPL2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3080 None 12 16 2 TRUE 0 0 NA C coding 480 1440 162 1601 PB.2779.1 chr4 - 5883 1 genic_intron novelGene_253 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A coding 110 330 2954 3283 PB.3842.1 chr6 - 1171 6 full-splice_match HLA-DRB1 ENST00000360004.5 1229 6 41 17 no_subtype FALSE canonical NA NA 165 None 5 10 0 FALSE 0 0 NA A coding 266 798 66 863 PB.10473.1 chr20 + 2601 14 full-splice_match OSBPL2 ENST00000313733.7 4009 14 79 1329 no_subtype FALSE canonical NA NA 1502 None 3 2 0 FALSE 0 0 NA C coding 480 1440 163 1602 PB.711.1 chr1 + 2645 2 genic RP11-307C12.12 novel NA NA NA NA no_subtype FALSE canonical NA NA 142 None 2 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1633.7 chr2 - 3864 3 full-splice_match ZEB2 ENST00000472146.5 3837 3 -34 7 no_subtype FALSE canonical NA NA 215 None 3 6 0 FALSE 0 0 NA C coding 128 384 285 668 PB.6655.1 chr11 - 1777 14 full-splice_match ZPR1 ENST00000227322.7 6566 14 23 4766 no_subtype TRUE canonical NA NA 208 None 30 4 0 FALSE 0 0 NA A coding 459 1377 38 1414 PB.7131.1 chr12 + 2759 2 novel_not_in_catalog ZDHHC17 novel NA NA NA NA no_subtype TRUE canonical NA NA 1420 None 2 20 1 TRUE 0 0 NA A coding 115 345 21 365 PB.422.2 chr1 - 3201 1 novel_in_catalog SLC35D1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2799.1 chr4 - 2648 2 full-splice_match TLR10 ENST00000361424.6 3484 2 35 801 no_subtype FALSE canonical NA NA 35 None 14 1 0 FALSE 0 0 NA A coding 797 2391 140 2530 PB.2019.10 chr3 + 6584 15 novel_not_in_catalog SLC6A6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2105 None 6 30 0 TRUE 0 0 NA B coding 649 1947 297 2243 PB.2200.3 chr3 - 2932 6 full-splice_match IP6K1 ENST00000321599.8 4456 6 -19 1543 no_subtype FALSE canonical NA NA 193 None 2 4 0 FALSE 0 0 NA A coding 435 1305 340 1644 PB.1775.2 chr2 + 2654 2 genic_intron novelGene_1368 novel NA NA NA NA no_subtype TRUE canonical NA NA 1226 None 3 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2556.1 chr3 + 3563 16 full-splice_match MFSD1 ENST00000622669.4 2361 16 222 -1424 no_subtype FALSE canonical NA NA 1399 None 91 11 0 FALSE 0 0 NA C coding 465 1395 6 1400 PB.8626.1 chr16 + 1679 16 full-splice_match CETP ENST00000200676.7 1791 16 112 0 no_subtype FALSE canonical NA NA 1425 None 5 0 0 FALSE 0 0 NA C coding 493 1479 19 1497 PB.8626.2 chr16 + 1717 3 novel_not_in_catalog CETP novel NA NA NA NA no_subtype FALSE canonical NA NA 1468 None 2 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10332.1 chr20 - 1436 9 full-splice_match EIF2S2 ENST00000374980.2 2656 9 75 1145 no_subtype FALSE canonical NA NA 162 None 53 2 0 FALSE 0 0 NA C coding 333 999 148 1146 PB.3695.2 chr5 + 2927 8 novel_not_in_catalog SQSTM1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1821 None 5 30 0 TRUE 0 0 NA C coding 390 1170 33 1202 PB.2674.4 chr3 + 3285 34 novel_not_in_catalog OPA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3164 None 2 13 5 TRUE 0 0 NA B coding 694 2082 1071 3152 PB.10332.2 chr20 - 2893 1 novel_in_catalog EIF2S2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 30 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7680.1 chr14 + 1436 4 full-splice_match LRR1 ENST00000298288.10 1745 4 303 6 no_subtype FALSE canonical NA NA 1025 None 2 2 0 FALSE 0 0 NA A coding 414 1242 22 1263 PB.10634.6 chr22 + 1498 9 novel_not_in_catalog COMT novel NA NA NA NA no_subtype FALSE canonical NA NA 1024 None 3 5 0 TRUE 0 0 NA B coding 271 813 410 1222 PB.10634.4 chr22 + 1433 7 novel_not_in_catalog COMT novel NA NA NA NA no_subtype FALSE canonical NA NA 955 None 2 10 2 FALSE 0 0 NA B coding 271 813 341 1153 PB.10634.5 chr22 + 1283 6 novel_not_in_catalog COMT novel NA NA NA NA no_subtype FALSE non_canonical NA NA 809 None 2 6 1 FALSE 0 0 NA B coding 221 663 345 1007 PB.10634.2 chr22 + 1387 7 novel_not_in_catalog COMT novel NA NA NA NA no_subtype FALSE canonical NA NA 913 None 12 5 0 FALSE 0 0 NA B coding 271 813 299 1111 PB.10634.3 chr22 + 1181 5 novel_in_catalog COMT novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 707 None 5 5 0 FALSE 0 0 NA B coding 271 813 93 905 PB.8856.1 chr17 - 1362 6 full-splice_match UBE2G1 ENST00000396981.6 3974 6 -161 2773 no_subtype FALSE canonical NA NA 373 None 10 3 0 FALSE 0 0 NA C coding 170 510 328 837 PB.8157.4 chr15 - 3264 21 novel_in_catalog DPP8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 222 None 8 1 1 FALSE 0 0 NA C coding 898 2694 322 3015 PB.10761.3 chr22 - 3551 5 novel_in_catalog JOSD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 31 None 2 23 1 FALSE 0 0 NA C coding 202 606 663 1268 PB.10761.2 chr22 - 2782 4 full-splice_match JOSD1 ENST00000216039.9 3648 4 787 79 no_subtype FALSE canonical NA NA 78 None 24 14 0 FALSE 0 0 NA C coding 135 405 95 499 PB.1907.1 chr2 + 2628 19 novel_not_in_catalog SP140L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1697 None 23 5 1 TRUE 0 0 NA B coding 345 1035 82 1116 PB.10761.4 chr22 - 3428 3 novel_not_in_catalog JOSD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 862 None 2 17 1 FALSE 0 0 NA C coding 157 471 678 1148 PB.1384.8 chr2 + 2638 1 incomplete-splice_match ACTR2 ENST00000260641.9 3861 9 1213 11 no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3649.1 chr5 + 2808 10 full-splice_match ERGIC1 ENST00000393784.7 2881 10 64 9 no_subtype FALSE canonical NA NA 840 None 18 12 0 FALSE 0 0 NA A coding 290 870 76 945 PB.6991.21 chr12 - 3120 15 novel_in_catalog ITGB7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 50 None 2 4 0 FALSE 0 0 NA C coding 359 1077 177 1253 PB.6442.1 chr11 - 2663 4 full-splice_match RNASEH2C ENST00000308418.8 2794 4 127 4 no_subtype FALSE canonical NA NA 234 None 4 20 0 FALSE 0 0 NA A coding 164 492 63 554 PB.10992.1 chrX + 1326 5 full-splice_match TSR2 ENST00000375151.4 1534 5 14 194 no_subtype FALSE canonical NA NA 448 None 37 4 0 FALSE 0 0 NA C coding 191 573 8 580 PB.1384.1 chr2 + 3419 9 full-splice_match ACTR2 ENST00000260641.9 3861 9 87 355 no_subtype FALSE canonical NA NA 1084 None 262 17 0 FALSE 0 0 NA C coding 394 1182 71 1252 PB.10111.2 chr19 + 1273 11 novel_not_in_catalog PRMT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 989 None 15 0 0 TRUE 0 0 NA B coding 353 1059 12 1070 PB.10111.3 chr19 + 3165 13 fusion ADM5,PRMT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2703 None 3 21 1 TRUE 0 0 NA A coding 353 1059 10 1068 PB.10111.1 chr19 + 1440 13 novel_not_in_catalog PRMT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1157 None 6 2 0 TRUE 0 0 NA B coding 342 1026 213 1238 PB.4071.1 chr6 + 3242 1 incomplete-splice_match FOXO3 ENST00000343882.10 7308 4 2973 1094 no_subtype FALSE canonical NA NA NA None 4 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1193.2 chr2 + 2662 1 genic_intron novelGene_95 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A coding 123 369 21 389 PB.3525.1 chr5 - 2248 3 full-splice_match PFDN1 ENST00000507185.1 787 3 2 -1463 no_subtype FALSE canonical NA NA 44 None 2 19 0 FALSE 0 0 NA A coding 101 303 12 314 PB.2208.6 chr3 + 3069 14 novel_in_catalog SEMA3B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2232 None 2 7 0 FALSE 0 0 NA C coding 156 468 43 510 PB.2208.5 chr3 + 2832 16 novel_in_catalog SEMA3B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1994 None 9 4 0 FALSE 0 0 NA C coding 477 1431 41 1471 PB.2208.4 chr3 + 2826 17 novel_not_in_catalog SEMA3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1960 None 6 4 0 TRUE 0 0 NA C coding 774 2322 41 2362 PB.2208.3 chr3 + 3268 17 full-splice_match SEMA3B ENST00000433753.4 2755 17 32 -545 no_subtype FALSE canonical NA NA 1882 None 35 8 0 FALSE 0 0 NA C coding 748 2244 41 2284 PB.2208.1 chr3 + 2906 18 novel_in_catalog SEMA3B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2039 None 2 3 0 FALSE 0 0 NA C coding 748 2244 198 2441 PB.9320.2 chr17 + 2992 7 novel_not_in_catalog BPTF novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2948 None 2 6 0 TRUE 0 0 NA B coding 446 1338 15 1352 PB.7148.12 chr12 - 3663 1 full-splice_match GALNT4 ENST00000529983.2 5399 1 20 1716 no_subtype FALSE canonical NA NA NA None 30 9 0 FALSE 0 0 NA A coding 578 1734 238 1971 PB.2993.1 chr4 - 2519 12 full-splice_match PAPSS1 ENST00000265174.4 2731 12 208 4 no_subtype FALSE canonical NA NA 125 None 12 9 0 FALSE 0 0 NA A coding 624 1872 66 1937 PB.1436.3 chr2 + 2223 4 full-splice_match DOK1 ENST00000464613.1 1807 4 -383 -33 no_subtype FALSE canonical NA NA 984 None 2 8 0 FALSE 0 0 NA C coding 342 1026 763 1788 PB.7195.1 chr12 + 2890 5 novel_in_catalog DRAM1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 495 None 9 20 0 FALSE 0 0 NA C coding 159 477 61 537 PB.3204.1 chr5 + 4500 8 full-splice_match IL7R ENST00000303115.7 4626 8 113 13 no_subtype FALSE canonical NA NA 892 None 34 11 0 FALSE 0 0 NA C coding 459 1377 17 1393 PB.3204.2 chr5 + 3143 1 novel_in_catalog IL7R novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3204.3 chr5 + 1496 4 novel_in_catalog IL7R novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 382 None 2 5 1 FALSE 0 0 NA C coding 188 564 4 567 PB.472.1 chr1 + 2620 10 incomplete-splice_match GBP6 ENST00000370456.4 2987 11 78 289 internal_fragment FALSE canonical NA NA 1677 None 40 6 0 FALSE 0 0 NA A coding 633 1899 16 1914 PB.3204.6 chr5 + 2674 1 incomplete-splice_match IL7R ENST00000303115.7 4626 8 1939 14 no_subtype FALSE canonical NA NA NA None 40 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1769.1 chr2 - 3708 6 novel_in_catalog AC013264.1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1414 None 2 14 0 FALSE 0 0 NA B coding 124 372 1611 1982 PB.9036.1 chr17 - 2768 2 genic_intron novelGene_301 novel NA NA NA NA no_subtype FALSE canonical NA NA 2734 None 4 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1757.11 chr2 - 2596 23 full-splice_match STAT1 ENST00000392322.7 2716 23 10 110 no_subtype FALSE canonical NA NA 141 None 205 3 0 FALSE 0 0 NA C coding 712 2136 297 2432 PB.9200.4 chr17 + 2861 7 novel_in_catalog SP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1781 None 7 6 1 FALSE 0 0 NA C coding 606 1818 62 1879 PB.4949.3 chr8 + 2992 4 novel_not_in_catalog YTHDF3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1251 None 3 21 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.4949.2 chr8 + 2972 4 novel_in_catalog YTHDF3 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1910 None 2 12 1 FALSE 0 0 NA C coding 534 1602 330 1931 PB.4949.1 chr8 + 3011 5 full-splice_match YTHDF3 ENST00000539294.5 5163 5 110 2042 no_subtype FALSE canonical NA NA 1949 None 21 6 0 FALSE 0 0 NA C coding 585 1755 216 1970 PB.9200.5 chr17 + 2867 7 novel_not_in_catalog SP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1785 None 3 9 1 TRUE 0 0 NA C coding 495 1485 399 1883 PB.1243.1 chr2 + 2532 14 full-splice_match SLC4A1AP ENST00000618046.4 2544 14 2 10 no_subtype FALSE canonical NA NA 2203 None 12 3 0 FALSE 0 0 NA A coding 742 2226 25 2250 PB.1535.3 chr2 + 2904 3 genic_intron novelGene_980 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2624 None 2 32 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3798.1 chr6 + 1314 3 full-splice_match ABT1 ENST00000274849.2 2949 3 27 1608 no_subtype FALSE canonical NA NA 442 None 29 6 0 FALSE 0 0 NA A coding 272 816 5 820 PB.9195.1 chr17 + 2840 23 full-splice_match NPEPPS ENST00000322157.8 4353 23 351 1162 no_subtype FALSE canonical NA NA 2493 None 67 2 0 FALSE 0 0 NA A coding 875 2625 19 2643 PB.3695.1 chr5 + 2007 8 full-splice_match SQSTM1 ENST00000389805.8 2986 8 149 830 no_subtype FALSE canonical NA NA 1194 None 168 15 0 FALSE 0 0 NA C coding 440 1320 30 1349 PB.5667.1 chr10 + 1523 2 genic_intron novelGene_54 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 28 None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6600.2 chr11 + 1717 12 novel_not_in_catalog CEP57 novel NA NA NA NA no_subtype FALSE canonical NA NA 1699 None 4 2 0 TRUE 0 0 NA C coding 500 1500 186 1685 PB.3342.2 chr5 + 3659 9 full-splice_match SCAMP1 ENST00000621999.4 4509 9 57 793 no_subtype FALSE canonical NA NA 884 None 9 13 0 FALSE 0 0 NA C coding 338 1014 33 1046 PB.4562.3 chr7 + 2864 20 full-splice_match SRRT ENST00000618411.4 2893 20 28 1 no_subtype TRUE canonical NA NA 2674 None 13 6 1 FALSE 0 0 NA C coding 871 2613 135 2747 PB.7189.1 chr12 + 3926 19 novel_not_in_catalog SCYL2 novel NA NA NA NA no_subtype TRUE canonical NA NA 2321 None 11 10 0 TRUE 0 0 NA B coding 929 2787 177 2963 PB.613.1 chr1 - 2812 1 incomplete-splice_match NOTCH2 ENST00000256646.6 11389 34 7656 922 no_subtype FALSE canonical NA NA NA None 10 13 0 FALSE 0 0 NA B coding 110 330 535 864 PB.5062.1 chr8 + 1052 1 full-splice_match NRBF2P4 ENST00000520874.1 850 1 -142 -60 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A coding 145 435 275 709 PB.1007.7 chr1 + 1497 1 incomplete-splice_match RASSF5 ENST00000579942.2 3279 2 1766 17 no_subtype FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1130.1 chr1 + 1883 18 novel_not_in_catalog TBCE novel NA NA NA NA no_subtype FALSE canonical NA NA 1589 None 5 5 0 TRUE 0 0 NA B coding 527 1581 99 1679 PB.1007.5 chr1 + 2878 4 incomplete-splice_match RASSF5 ENST00000636182.1 3427 6 366 183 internal_fragment FALSE canonical NA NA 438 None 4 6 0 FALSE 0 0 NA C coding 191 573 16 588 PB.1007.4 chr1 + 5700 2 genic RASSF5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5531 None 29 21 0 TRUE 0 0 NA C coding 158 474 359 832 PB.1007.3 chr1 + 3192 5 full-splice_match RASSF5 ENST00000577571.5 3496 5 310 -6 no_subtype FALSE canonical NA NA 744 None 231 7 0 FALSE 0 0 NA C coding 265 795 100 894 PB.9749.1 chr19 - 1100 11 full-splice_match EIF3G ENST00000253108.8 1103 11 3 0 no_subtype FALSE canonical NA NA 60 None 2 1 0 FALSE 0 0 NA A coding 320 960 41 1000 PB.7107.5 chr12 - 3473 10 novel_not_in_catalog CPM novel NA NA NA NA no_subtype FALSE canonical NA NA 144 None 2 16 0 TRUE 0 0 NA B coding 443 1329 148 1476 PB.3232.4 chr5 - 2795 1 novel_in_catalog HMGCS1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3232.3 chr5 - 2781 11 novel_not_in_catalog HMGCS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 57 None 4 4 1 TRUE 0 0 NA C coding 520 1560 91 1650 PB.3232.2 chr5 - 2844 10 full-splice_match HMGCS1 ENST00000433297.2 3466 10 16 606 no_subtype FALSE canonical NA NA 141 None 18 6 0 FALSE 0 0 NA C coding 520 1560 152 1711 PB.3232.1 chr5 - 2817 11 full-splice_match HMGCS1 ENST00000325110.10 3506 11 83 606 no_subtype FALSE canonical NA NA 55 None 49 4 0 FALSE 0 0 NA C coding 520 1560 125 1684 PB.10995.9 chrX - 1814 10 full-splice_match ALAS2 ENST00000335854.8 1795 10 8 -27 no_subtype FALSE canonical NA NA 28 None 138 1 0 FALSE 0 0 NA C coding 550 1650 44 1693 PB.10105.1 chr19 + 1121 8 full-splice_match RPL13A ENST00000391857.8 1181 8 55 5 no_subtype FALSE canonical NA NA 546 None 32 2 0 FALSE 0 0 NA A coding 203 609 22 630 PB.10995.4 chrX - 1741 10 novel_in_catalog ALAS2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 40 None 11 1 0 FALSE 0 0 NA C coding 515 1545 76 1620 PB.9348.1 chr17 - 3502 4 full-splice_match CD300E ENST00000392619.1 3501 4 0 -1 no_subtype FALSE canonical NA NA 157 None 3 10 1 FALSE 0 0 NA A coding 232 696 37 732 PB.10995.1 chrX - 1920 11 novel_not_in_catalog ALAS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 28 None 1111 1 0 FALSE 0 0 NA C coding 562 1686 44 1729 PB.4233.3 chr6 - 981 6 full-splice_match SOD2 ENST00000367055.8 990 6 -49 58 no_subtype FALSE canonical NA NA 139 None 53 1 0 FALSE 0 0 NA C coding 222 666 117 782 PB.507.1 chr1 + 1729 9 full-splice_match SNX7 ENST00000306121.7 1734 9 0 5 no_subtype FALSE canonical NA NA 1287 None 3 2 0 FALSE 0 0 NA A coding 451 1353 10 1362 PB.4545.1 chr7 - 2412 15 full-splice_match MCM7 ENST00000303887.9 2957 15 543 2 no_subtype FALSE canonical NA NA 134 None 3 4 0 FALSE 0 0 NA A coding 719 2157 104 2260 PB.4233.7 chr6 - 3148 6 novel_not_in_catalog SOD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 73 None 4 17 1 TRUE 0 0 NA C coding 222 666 51 716 PB.4233.6 chr6 - 3157 6 novel_not_in_catalog SOD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 93 None 2 17 0 TRUE 0 0 NA C coding 222 666 71 736 PB.4233.5 chr6 - 1792 5 full-splice_match SOD2 ENST00000538183.6 14266 5 33 12441 no_subtype FALSE canonical NA NA 151 None 48 6 0 FALSE 0 0 NA C coding 222 666 129 794 PB.4233.4 chr6 - 3268 7 novel_not_in_catalog SOD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 165 None 2 46 2 TRUE 0 0 NA C coding 222 666 143 808 PB.1571.1 chr2 + 3515 2 genic_intron novelGene_1058 novel NA NA NA NA no_subtype FALSE canonical NA NA 296 None 4 28 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.307.2 chr1 + 1399 8 novel_not_in_catalog YBX1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1037 None 2 1 0 TRUE 0 0 NA C coding 127 381 623 1003 PB.946.48 chr1 + 2989 18 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE canonical NA NA 1901 None 2 12 0 FALSE 0 0 NA B coding 679 2037 138 2174 PB.7856.8 chr14 + 1318 1 genic CALM1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 37 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.416.1 chr1 + 2661 1 novel_in_catalog LEPROT novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 9 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2166.1 chr3 + 623 4 full-splice_match CAMP ENST00000296435.2 745 4 118 4 no_subtype FALSE canonical NA NA 428 None 5 0 0 FALSE 0 0 NA A coding 173 519 39 557 PB.10833.1 chr22 + 2590 1 genic_intron novelGene_463 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.307.1 chr1 + 1514 8 full-splice_match YBX1 ENST00000321358.11 1514 8 0 0 no_subtype FALSE canonical NA NA 1145 None 31 1 0 FALSE 0 0 NA C coding 324 972 140 1111 PB.9775.3 chr19 - 3651 12 novel_in_catalog KANK2 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical NA NA 48 None 2 11 0 FALSE 0 0 NA B coding 851 2553 128 2680 PB.9775.2 chr19 - 3751 14 novel_not_in_catalog KANK2 novel NA NA NA NA no_subtype TRUE canonical NA NA 49 None 109 9 1 TRUE 0 0 NA B coding 851 2553 376 2928 PB.9775.1 chr19 - 3844 14 novel_not_in_catalog KANK2 novel NA NA NA NA no_subtype TRUE canonical NA NA 61 None 28 9 1 TRUE 0 0 NA B coding 851 2553 322 2874 PB.2645.1 chr3 - 2772 5 novel_not_in_catalog TRA2B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 277 None 2 33 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.5445.1 chr9 + 2747 2 intergenic novelGene_1004 novel NA NA NA NA no_subtype FALSE canonical NA NA 1913 None 25 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2480.1 chr3 - 3220 9 novel_in_catalog SLCO2A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 139 None 2 10 0 FALSE 0 0 NA A coding 362 1086 122 1207 PB.5445.2 chr9 + 1685 3 intergenic novelGene_1004 novel NA NA NA NA no_subtype FALSE canonical NA NA 426 None 4 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4559.1 chr7 - 2018 1 incomplete-splice_match GIGYF1 ENST00000275732.5 6530 24 4510 3 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8154.1 chr15 - 2521 14 full-splice_match CLPX ENST00000300107.7 4695 14 -68 2242 no_subtype FALSE canonical NA NA 336 None 5 5 0 FALSE 0 0 NA A coding 633 1899 258 2156 PB.4955.1 chr8 - 1293 8 full-splice_match COPS5 ENST00000357849.8 1480 8 178 9 no_subtype FALSE canonical NA NA 286 None 6 0 0 FALSE 0 0 NA A coding 334 1002 144 1145 PB.2383.1 chr3 + 4539 15 full-splice_match ATP6V1A ENST00000273398.7 4591 15 45 7 no_subtype FALSE canonical NA NA 1824 None 9 16 0 FALSE 0 0 NA C coding 617 1851 64 1914 PB.4790.2 chr8 - 5162 3 novel_not_in_catalog PPP1R3B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 67 None 2 31 0 TRUE 0 0 NA B coding 284 852 96 947 PB.4790.1 chr8 - 2542 1 incomplete-splice_match PPP1R3B ENST00000310455.3 5548 2 2996 11 no_subtype FALSE canonical NA NA NA None 4 18 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3579.8 chr5 - 1664 2 novel_in_catalog CD74 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 132 None 3 5 0 FALSE 0 0 NA C coding 106 318 8 325 PB.6108.1 chr11 - 2808 23 novel_not_in_catalog ANO9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 62 None 11 4 0 FALSE 0 0 NA A coding 782 2346 57 2402 PB.9498.1 chr18 + 3378 9 full-splice_match SEH1L ENST00000262124.15 3494 9 104 12 no_subtype FALSE canonical NA NA 1093 None 52 18 0 FALSE 0 0 NA A coding 360 1080 24 1103 PB.7856.2 chr14 + 3178 5 novel_in_catalog CALM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3082 None 2 25 0 FALSE 0 0 NA C coding 106 318 203 520 PB.4836.4 chr8 - 3111 14 novel_not_in_catalog ENTPD4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 91 None 2 9 1 TRUE 0 0 NA B coding 608 1824 186 2009 PB.3579.2 chr5 - 1205 8 full-splice_match CD74 ENST00000353334.10 1449 8 173 71 no_subtype FALSE canonical NA NA 132 None 927 6 1 FALSE 0 0 NA C coding 232 696 8 703 PB.3579.1 chr5 - 1345 10 novel_not_in_catalog CD74 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 127 None 39 6 1 TRUE 0 0 NA C coding 232 696 3 698 PB.1118.1 chr1 + 2581 6 full-splice_match TSNAX ENST00000366639.8 2650 6 63 6 no_subtype FALSE canonical NA NA 590 None 38 8 0 FALSE 0 0 NA C coding 290 870 96 965 PB.3579.7 chr5 - 3662 6 full-splice_match CD74 ENST00000517752.5 816 6 -5 -2841 no_subtype FALSE canonical NA NA 127 None 4 17 1 FALSE 0 0 NA C coding 279 837 3 839 PB.4836.1 chr8 - 2998 15 novel_not_in_catalog ENTPD4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 85 None 20 8 0 TRUE 0 0 NA B coding 616 1848 183 2030 PB.4836.2 chr8 - 5525 15 novel_not_in_catalog ENTPD4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 139 None 5 31 0 TRUE 0 0 NA B coding 608 1824 237 2060 PB.4836.3 chr8 - 5491 13 novel_not_in_catalog ENTPD4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 186 None 3 30 0 TRUE 0 0 NA B coding 582 1746 281 2026 PB.9824.14 chr19 + 4134 18 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3508 None 2 20 1 TRUE 0 0 NA C coding 500 1500 2036 3535 PB.9824.15 chr19 + 3104 19 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2476 None 2 16 1 TRUE 0 0 NA C coding 577 1731 773 2503 PB.9824.16 chr19 + 2827 18 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2201 None 35 6 0 TRUE 0 0 NA C coding 716 2148 81 2228 PB.9824.17 chr19 + 2668 9 novel_in_catalog ADGRE5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2193 None 2 10 0 FALSE 0 0 NA C coding 219 657 1893 2549 PB.1984.1 chr3 + 2938 8 novel_not_in_catalog OGG1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2220 None 2 22 1 TRUE 0 0 NA C coding 295 885 968 1852 PB.1984.2 chr3 + 1601 7 full-splice_match OGG1 ENST00000344629.11 1744 7 32 111 no_subtype FALSE canonical NA NA 1259 None 2 7 0 FALSE 0 0 NA C coding 345 1035 312 1346 PB.10171.5 chr19 - 3438 25 novel_not_in_catalog PPP6R1 novel NA NA NA NA no_subtype FALSE canonical NA NA 36 None 5 3 0 TRUE 0 0 NA C coding 881 2643 48 2690 PB.10171.7 chr19 - 3432 24 novel_not_in_catalog PPP6R1 novel NA NA NA NA no_subtype FALSE canonical NA NA 36 None 3 6 1 FALSE 0 0 NA C coding 881 2643 43 2685 PB.9824.18 chr19 + 3012 19 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2382 None 2 6 0 FALSE 0 0 NA C coding 776 2328 82 2409 PB.9824.19 chr19 + 1631 11 novel_in_catalog ADGRE5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1155 None 2 5 0 FALSE 0 0 NA C coding 477 1431 81 1511 PB.10171.2 chr19 - 2982 24 full-splice_match PPP6R1 ENST00000412770.6 3961 24 473 506 no_subtype FALSE canonical NA NA 88 None 6 3 0 FALSE 0 0 NA C coding 881 2643 95 2737 PB.4757.1 chr7 + 3152 16 novel_not_in_catalog NUB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1755 None 59 10 1 TRUE 0 0 NA B coding 615 1845 87 1931 PB.4376.18 chr7 - 3540 1 genic_intron novelGene_364 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA A coding 132 396 1543 1938 PB.7959.193 chr14 - 1565 9 fusion IGHV3-62,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 124 None 2 6 4 TRUE 0 0 NA B coding 196 588 843 1430 PB.4221.2 chr6 - 2834 16 novel_in_catalog SERAC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 110 None 4 9 0 FALSE 0 0 NA C coding 584 1752 285 2036 PB.517.3 chr1 + 1671 1 antisense novelGene_Y_RNA_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.517.2 chr1 + 3343 16 novel_not_in_catalog CDC14A novel NA NA NA NA no_subtype FALSE canonical NA NA 2817 None 2 6 1 TRUE 0 0 NA B coding 623 1869 132 2000 PB.517.1 chr1 + 2950 7 novel_in_catalog CDC14A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 909 None 2 16 0 FALSE 0 0 NA B coding 183 549 454 1002 PB.4376.10 chr7 - 3437 1 full-splice_match MIR1200 ENST00000408398.1 76 1 -2936 -425 no_subtype FALSE canonical NA NA NA None 6 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4376.17 chr7 - 1573 15 novel_not_in_catalog ELMO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 190 None 2 1 0 TRUE 0 0 NA B coding 413 1239 264 1502 PB.517.6 chr1 + 4496 2 novel_not_in_catalog CDC14A novel NA NA NA NA no_subtype FALSE canonical NA NA 3970 None 3 16 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.3164.3 chr5 - 3924 14 full-splice_match LPCAT1 ENST00000283415.3 3966 14 25 17 no_subtype FALSE canonical NA NA 243 None 8 14 0 FALSE 0 0 NA C coding 534 1602 109 1710 PB.3164.2 chr5 - 3490 11 novel_not_in_catalog LPCAT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 273 None 4 19 1 FALSE 0 0 NA C coding 331 993 277 1269 PB.10551.1 chr21 - 2952 1 genic_intron novelGene_342 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3045.1 chr4 - 2749 7 full-splice_match ELF2 ENST00000358635.7 3036 7 260 27 no_subtype FALSE canonical NA NA 104 None 6 5 0 FALSE 0 0 NA C coding 533 1599 47 1645 PB.8951.1 chr17 - 1737 2 full-splice_match RASD1 ENST00000225688.3 1746 2 -2 11 no_subtype FALSE canonical NA NA 500 None 4 14 0 FALSE 0 0 NA A coding 276 828 230 1057 PB.11126.1 chrX + 2633 1 genic_intron novelGene_1050 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1736.1 chr2 + 1558 7 incomplete-splice_match ZC3H15 ENST00000337859.10 2138 10 573 7 internal_fragment FALSE canonical NA NA 744 None 2 3 0 FALSE 0 0 NA A coding 277 831 102 932 PB.9490.1 chr18 - 2715 16 novel_not_in_catalog MPPE1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 147 None 2 25 5 TRUE 0 0 NA A coding 397 1191 569 1759 PB.10036.1 chr19 + 2616 3 full-splice_match ZNF576 ENST00000336564.4 2566 3 -22 -28 no_subtype FALSE canonical NA NA 261 None 2 9 0 FALSE 0 0 NA A coding 170 510 177 686 PB.6703.11 chr11 - 6062 1 antisense novelGene_SORL1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 52 0 FALSE 0 0 NA B coding 85 255 58 312 PB.5451.1 chr9 - 2935 4 genic_intron novelGene_1006 novel NA NA NA NA no_subtype TRUE canonical NA NA 828 None 4 11 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.7915.2 chr14 + 2934 14 novel_in_catalog EVL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2402 None 18 11 0 FALSE 0 0 NA C coding 386 1158 89 1246 PB.1623.2 chr2 - 2836 2 genic_intron novelGene_1214 novel NA NA NA NA no_subtype FALSE canonical NA NA 415 None 2 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7022.2 chr12 - 3212 7 full-splice_match DNAJC14 ENST00000317269.7 3330 7 88 30 no_subtype FALSE canonical NA NA 60 None 56 9 0 FALSE 0 0 NA A coding 702 2106 117 2222 PB.6061.1 chr10 + 4524 29 novel_not_in_catalog WDR11 novel NA NA NA NA no_subtype TRUE canonical NA NA 3562 None 7 5 1 TRUE 0 0 NA A coding 1228 3684 32 3715 PB.10540.1 chr21 - 1613 13 full-splice_match CRYZL1 ENST00000381554.7 1617 13 -3 7 no_subtype FALSE canonical NA NA 83 None 5 6 0 FALSE 0 0 NA C coding 349 1047 90 1136 PB.10540.2 chr21 - 3494 1 novel_in_catalog CRYZL1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4639.1 chr7 - 2489 1 novel_in_catalog ZNF800 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B coding 32 96 227 322 PB.2795.1 chr4 - 5883 2 genic_intron novelGene_375 novel NA NA NA NA no_subtype TRUE canonical NA NA 3601 None 2 33 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9994.6 chr19 + 2785 12 novel_not_in_catalog PSMC4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2761 None 5 21 2 TRUE 0 0 NA C coding 418 1254 34 1287 PB.8959.9 chr17 - 2644 19 novel_not_in_catalog FLII novel NA NA NA NA no_subtype FALSE non_canonical NA NA 97 None 2 10 0 TRUE 0 0 NA C coding 771 2313 35 2347 PB.9757.1 chr19 - 1740 7 full-splice_match ICAM3 ENST00000160262.9 1934 7 188 6 no_subtype TRUE canonical NA NA 97 None 185 1 0 FALSE 0 0 NA A coding 547 1641 22 1662 PB.11086.1 chrX + 2009 5 full-splice_match ARMCX3 ENST00000341189.8 3730 5 348 1373 no_subtype FALSE canonical NA NA 372 None 5 9 0 FALSE 0 0 NA C coding 342 1026 630 1655 PB.291.1 chr1 - 2269 9 novel_not_in_catalog PPT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 128 None 9 15 1 FALSE 0 0 NA B coding 305 915 5 919 PB.8959.5 chr17 - 4119 30 full-splice_match FLII ENST00000327031.8 4338 30 211 8 no_subtype TRUE canonical NA NA 78 None 154 4 0 FALSE 0 0 NA C coding 1269 3807 16 3822 PB.9994.4 chr19 + 1432 11 novel_not_in_catalog PSMC4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1189 None 2 2 1 TRUE 0 0 NA C coding 345 1035 39 1073 PB.3505.1 chr5 + 4134 5 full-splice_match FAM53C ENST00000239906.9 4377 5 235 8 no_subtype FALSE canonical NA NA 1114 None 34 5 0 FALSE 0 0 NA A coding 392 1176 194 1369 PB.7601.1 chr14 - 1691 1 full-splice_match LINC00641 ENST00000555379.1 5425 1 3537 197 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10600.2 chr21 - 1511 6 full-splice_match UBE2G2 ENST00000345496.6 3566 6 193 1862 no_subtype FALSE canonical NA NA 121 None 63 11 0 FALSE 0 0 NA C coding 165 495 79 573 PB.10600.1 chr21 - 2603 7 novel_not_in_catalog UBE2G2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 124 None 12 19 0 TRUE 0 0 NA C coding 165 495 82 576 PB.7108.4 chr12 + 2094 10 novel_not_in_catalog CPSF6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1667 None 9 0 0 FALSE 0 0 NA B coding 552 1656 6 1661 PB.6527.1 chr11 + 3427 12 full-splice_match POLD3 ENST00000263681.6 3821 12 68 326 no_subtype FALSE canonical NA NA 1259 None 15 14 0 FALSE 0 0 NA C coding 466 1398 62 1459 PB.7108.3 chr12 + 3712 11 novel_not_in_catalog CPSF6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1706 None 2 12 0 TRUE 0 0 NA B coding 551 1653 48 1700 PB.6527.3 chr11 + 1606 1 novel_in_catalog POLD3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10493.1 chr20 + 3595 7 novel_not_in_catalog PCMTD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1930 None 28 19 1 TRUE 0 0 NA B coding 361 1083 96 1178 PB.7103.2 chr12 + 2676 1 genic_intron novelGene_646 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3930.1 chr6 - 794 4 novel_not_in_catalog MEA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 27 None 2 2 0 FALSE 0 0 NA A coding 162 486 69 554 PB.92.1 chr1 - 2042 1 incomplete-splice_match RCC2 ENST00000375436.8 4087 13 2044 2 no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.92.2 chr1 - 2834 5 incomplete-splice_match RCC2 ENST00000375436.8 4087 13 1249 4 5prime_fragment FALSE canonical NA NA 146 None 4 14 0 FALSE 0 0 NA B coding 152 456 50 505 PB.10093.2 chr19 - 631 7 full-splice_match RPL18 ENST00000549920.5 1004 7 360 13 no_subtype FALSE canonical NA NA 36 None 7 0 0 FALSE 0 0 NA A coding 188 564 34 597 PB.11086.2 chrX + 2546 4 novel_in_catalog ARMCX3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 883 None 3 3 0 FALSE 0 0 NA C coding 342 1026 1141 2166 PB.10915.1 chrX - 3025 19 novel_not_in_catalog RPGR novel NA NA NA NA no_subtype FALSE canonical NA NA 170 None 2 2 0 FALSE 0 0 NA A coding 811 2433 143 2575 PB.5147.1 chr8 + 1123 4 full-splice_match LY6E ENST00000429120.6 1173 4 46 4 no_subtype FALSE canonical NA NA 282 None 42 5 1 FALSE 0 0 NA C coding 131 393 111 503 PB.9201.1 chr17 + 3133 9 novel_not_in_catalog PNPO novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1856 None 48 12 1 TRUE 0 0 NA A coding 230 690 67 756 PB.9994.1 chr19 + 1407 11 full-splice_match PSMC4 ENST00000157812.6 1591 11 177 7 no_subtype FALSE canonical NA NA 1164 None 109 1 1 FALSE 0 0 NA C coding 418 1254 22 1275 PB.10012.1 chr19 - 1536 2 incomplete-splice_match B3GNT8 ENST00000321702.2 1874 3 335 3 5prime_fragment FALSE canonical NA NA 87 None 26 4 0 FALSE 0 0 NA A coding 397 1191 120 1310 PB.10012.3 chr19 - 1711 6 full-splice_match ATP5SL ENST00000221943.13 1692 6 -21 2 no_subtype FALSE canonical NA NA 45 None 31 6 0 FALSE 0 0 NA A coding 257 771 28 798 PB.3262.2 chr5 - 4406 1 incomplete-splice_match IL6ST ENST00000381287.8 8667 14 2732 1530 no_subtype FALSE canonical NA NA NA None 13 45 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8948.1 chr17 + 3747 23 novel_not_in_catalog MPRIP novel NA NA NA NA no_subtype TRUE canonical NA NA 3018 None 2 8 0 TRUE 0 0 NA A coding 926 2778 208 2985 PB.2309.1 chr3 + 1589 1 full-splice_match RP11-550F7.1 ENST00000476047.1 1411 1 539 -717 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A coding 158 474 276 749 PB.10468.1 chr20 - 3162 2 genic ATP5E novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3041 None 5 27 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.400.1 chr1 - 3234 16 novel_not_in_catalog CYP2J2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 237 None 3 9 3 TRUE 0 0 NA A coding 498 1494 40 1533 PB.3010.1 chr4 + 2852 5 incomplete-splice_match ANK2 ENST00000505342.5 5356 10 2501 3 internal_fragment FALSE canonical NA NA 571 None 2 11 0 FALSE 0 0 NA A coding 145 435 149 583 PB.172.1 chr1 + 2704 3 incomplete-splice_match ARID1A ENST00000430799.7 6521 20 3796 21 internal_fragment FALSE canonical NA NA 570 None 13 3 0 FALSE 0 0 NA B coding 754 2262 40 2301 PB.172.2 chr1 + 6218 20 novel_not_in_catalog ARID1A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4082 None 4 6 1 FALSE 0 0 NA B coding 805 2415 3399 5813 PB.172.3 chr1 + 2829 1 genic_intron novelGene_261 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4947.5 chr8 - 2781 14 novel_not_in_catalog ASPH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 243 None 2 10 1 FALSE 0 0 NA B coding 244 732 315 1046 PB.4947.4 chr8 - 2770 14 novel_not_in_catalog ASPH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 243 None 2 18 2 FALSE 0 0 NA B coding 240 720 315 1034 PB.7508.1 chr13 - 1707 14 full-splice_match VPS36 ENST00000378060.8 4417 14 -12 2722 no_subtype FALSE canonical NA NA 136 None 33 4 1 FALSE 0 0 NA A coding 386 1158 41 1198 PB.6168.1 chr11 + 1850 2 genic RP11-304C12.5 novel NA NA NA NA no_subtype FALSE canonical NA NA 567 None 3 10 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.5732.1 chr10 + 1514 3 genic_intron novelGene_315 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 571 None 2 15 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.4947.3 chr8 - 2866 15 novel_not_in_catalog ASPH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 305 None 45 16 1 FALSE 0 0 NA B coding 255 765 377 1141 PB.4947.2 chr8 - 2672 13 novel_not_in_catalog ASPH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 260 None 4 11 1 FALSE 0 0 NA B coding 201 603 332 934 PB.10307.1 chr20 + 3856 21 novel_not_in_catalog PYGB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2655 None 399 9 1 TRUE 0 0 NA B coding 752 2256 165 2420 PB.5807.4 chr10 + 1426 10 full-splice_match HNRNPH3 ENST00000265866.11 2339 10 -7 920 no_subtype FALSE canonical NA NA 1136 None 7 2 0 FALSE 0 0 NA C coding 346 1038 173 1210 PB.5283.1 chr9 - 1535 8 novel_in_catalog TPM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 211 None 2 2 0 FALSE 0 0 NA C coding 303 909 98 1006 PB.5283.2 chr9 - 1014 9 full-splice_match TPM2 ENST00000378292.7 2147 9 1106 27 no_subtype FALSE canonical NA NA 211 None 5 1 0 FALSE 0 0 NA C coding 284 852 98 949 PB.3623.4 chr5 - 3306 11 full-splice_match RNF145 ENST00000519865.5 3478 11 163 9 no_subtype FALSE canonical NA NA 23 None 2 6 0 FALSE 0 0 NA C coding 663 1989 63 2051 PB.9747.1 chr19 + 1870 8 full-splice_match C19orf66 ENST00000253110.15 2117 8 243 4 no_subtype FALSE canonical NA NA 698 None 12 3 0 FALSE 0 0 NA C coding 291 873 56 928 PB.9747.2 chr19 + 2048 7 full-splice_match C19orf66 ENST00000585919.5 2079 7 20 11 no_subtype FALSE canonical NA NA 876 None 4 3 0 FALSE 0 0 NA C coding 163 489 112 600 PB.9747.3 chr19 + 2477 6 novel_in_catalog C19orf66 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 490 None 2 14 0 FALSE 0 0 NA C coding 163 489 107 595 PB.4625.2 chr7 + 2991 4 novel_not_in_catalog CAV1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1647 None 2 11 1 TRUE 0 0 NA B coding 147 441 691 1131 PB.4625.3 chr7 + 2531 3 novel_not_in_catalog CAV1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1187 None 4 9 1 TRUE 0 0 NA B coding 147 441 231 671 PB.3070.1 chr4 + 3012 7 full-splice_match SMAD1 ENST00000515385.1 2085 7 195 -1122 no_subtype FALSE canonical NA NA 1601 None 2 7 0 FALSE 0 0 NA A coding 465 1395 348 1742 PB.4625.1 chr7 + 2436 4 novel_not_in_catalog CAV1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1099 None 8 10 1 TRUE 0 0 NA B coding 178 534 50 583 PB.312.1 chr1 + 3863 23 full-splice_match TIE1 ENST00000372476.7 3882 23 16 3 no_subtype FALSE canonical NA NA 3408 None 29 2 1 FALSE 0 0 NA A coding 1138 3414 64 3477 PB.5433.1 chr9 + 2867 1 genic_intron novelGene_984 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6864.1 chr12 - 3683 1 genic_intron novelGene_226 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9668.4 chr19 + 1479 9 novel_not_in_catalog NFIC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1292 None 2 9 2 TRUE 0 0 NA C coding 429 1287 116 1402 PB.7615.3 chr14 - 2537 16 novel_not_in_catalog RBM23 novel NA NA NA NA no_subtype FALSE canonical NA NA 178 None 10 12 2 TRUE 0 0 NA B coding 439 1317 189 1505 PB.8654.2 chr16 - 3981 13 novel_not_in_catalog SLC38A7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 250 None 2 13 3 TRUE 0 0 NA A coding 462 1386 366 1751 PB.9668.1 chr19 + 1543 10 full-splice_match NFIC ENST00000395111.7 1755 10 5 207 no_subtype FALSE canonical NA NA 1359 None 7 0 0 FALSE 0 0 NA C coding 430 1290 32 1321 PB.7615.4 chr14 - 2474 15 novel_not_in_catalog RBM23 novel NA NA NA NA no_subtype FALSE canonical NA NA 163 None 2 12 2 TRUE 0 0 NA B coding 423 1269 174 1442 PB.9668.3 chr19 + 1596 10 full-splice_match NFIC ENST00000590282.5 1558 10 0 -38 no_subtype FALSE canonical NA NA 1409 None 10 0 0 FALSE 0 0 NA C coding 439 1317 55 1371 PB.9334.1 chr17 + 2743 2 full-splice_match KCNJ2 ENST00000243457.3 5392 2 4 2645 no_subtype FALSE canonical NA NA 163 None 2 3 0 FALSE 0 0 NA A coding 427 1281 380 1660 PB.1541.1 chr2 + 2695 2 novel_not_in_catalog BCL2L11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2306 None 3 19 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.7959.270 chr14 - 1938 7 fusion IGHM,IGHV4-39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 83 None 2 14 1 TRUE 0 0 NA B coding 375 1125 693 1817 PB.6493.1 chr11 + 4360 24 full-splice_match PPP6R3 ENST00000393800.6 5093 24 -2 735 no_subtype FALSE canonical NA NA 2826 None 2 8 1 FALSE 0 0 NA A coding 873 2619 257 2875 PB.2462.3 chr3 - 1511 11 full-splice_match ISY1 ENST00000393295.7 3842 11 187 2144 no_subtype FALSE canonical NA NA 134 None 8 4 0 FALSE 0 0 NA C coding 285 855 132 986 PB.7910.1 chr14 - 3004 1 genic_intron novelGene_905 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 17 0 FALSE 0 0 NA A coding 104 312 570 881 PB.6198.1 chr11 - 2803 5 novel_in_catalog SBF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 859 None 2 12 1 FALSE 0 0 NA A coding 195 585 925 1509 PB.1167.1 chr1 + 3019 4 novel_not_in_catalog ZNF672 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 562 None 14 14 1 TRUE 0 0 NA A coding 452 1356 786 2141 PB.1752.1 chr2 + 4449 8 novel_not_in_catalog MFSD6 novel NA NA NA NA no_subtype TRUE canonical NA NA 2372 None 3 15 0 TRUE 0 0 NA A coding 791 2373 201 2573 PB.1331.1 chr2 + 2150 2 antisense novelGene_NRXN1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1201 None 3 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8312.1 chr15 - 2907 3 full-splice_match RGMA ENST00000542321.6 3038 3 -20 151 no_subtype FALSE canonical NA NA 253 None 30 15 0 FALSE 0 0 NA A coding 432 1296 178 1473 PB.3078.6 chr4 - 1463 1 genic_intron novelGene_1233 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3078.5 chr4 - 2781 3 genic_intron novelGene_1231 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 620 None 6 19 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.11093.1 chrX - 1117 3 full-splice_match TCEAL8 ENST00000372685.7 1222 3 49 56 no_subtype FALSE canonical NA NA 77 None 4 2 0 FALSE 0 0 NA A coding 117 351 189 539 PB.3078.3 chr4 - 3076 1 genic_intron novelGene_1229 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A coding 103 309 728 1036 PB.3078.2 chr4 - 5859 9 full-splice_match NR3C2 ENST00000358102.7 5893 9 29 5 no_subtype FALSE canonical NA NA 332 None 4 21 0 FALSE 0 0 NA A coding 970 2910 377 3286 PB.5137.6 chr8 - 2940 8 novel_not_in_catalog ST3GAL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 190 None 2 9 0 FALSE 0 0 NA C coding 340 1020 1058 2077 PB.716.3 chr1 + 2923 23 novel_not_in_catalog ADAM15 novel NA NA NA NA no_subtype FALSE canonical NA NA 2608 None 11 4 0 FALSE 0 0 NA B coding 542 1626 1023 2648 PB.2462.2 chr3 - 1731 12 novel_not_in_catalog ISY1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 133 None 2 7 0 TRUE 0 0 NA C coding 285 855 131 985 PB.4314.1 chr7 + 3202 5 incomplete-splice_match HDAC9 ENST00000406072.5 4102 10 893 7 internal_fragment FALSE canonical NA NA 578 None 2 3 0 FALSE 0 0 NA A coding 288 864 27 890 PB.2764.1 chr4 - 3037 6 novel_not_in_catalog LCORL novel NA NA NA NA no_subtype TRUE canonical NA NA 143 None 2 21 0 TRUE 0 0 NA A coding 262 786 11 796 PB.3947.1 chr6 - 2002 4 full-splice_match SLC35B2 ENST00000393812.3 2043 4 39 2 no_subtype FALSE canonical NA NA 116 None 9 12 0 FALSE 0 0 NA C coding 432 1296 106 1401 PB.168.1 chr1 + 1868 6 full-splice_match HMGN2 ENST00000361427.5 1191 6 -12 -665 no_subtype FALSE canonical NA NA 343 None 38 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3006.1 chr4 - 1608 2 full-splice_match TIFA ENST00000361717.3 4157 2 -1 2550 no_subtype FALSE canonical NA NA 265 None 11 9 0 FALSE 0 0 NA A coding 184 552 284 835 PB.10307.2 chr20 + 2754 21 novel_not_in_catalog PYGB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2683 None 2 3 0 TRUE 0 0 NA B coding 843 2529 109 2637 PB.168.2 chr1 + 1552 5 full-splice_match HMGN2 ENST00000460563.5 1045 5 29 -536 no_subtype FALSE canonical NA NA 696 None 4 8 0 FALSE 0 0 NA C coding 136 408 359 766 PB.3947.2 chr6 - 1791 3 full-splice_match SLC35B2 ENST00000495706.1 1859 3 54 14 no_subtype FALSE canonical NA NA 101 None 2 11 0 FALSE 0 0 NA C coding 327 981 212 1192 PB.6991.9 chr12 - 2777 16 novel_not_in_catalog ITGB7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 50 None 3 4 1 TRUE 0 0 NA C coding 798 2394 152 2545 PB.6991.6 chr12 - 2786 16 novel_not_in_catalog ITGB7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 50 None 7 5 1 TRUE 0 0 NA C coding 793 2379 175 2553 PB.6991.7 chr12 - 2776 17 novel_not_in_catalog ITGB7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 50 None 36 3 1 TRUE 0 0 NA C coding 798 2394 153 2546 PB.6991.4 chr12 - 2805 16 full-splice_match ITGB7 ENST00000267082.9 2867 16 52 10 no_subtype FALSE canonical NA NA 54 None 48 2 0 FALSE 0 0 NA C coding 798 2394 181 2574 PB.6991.5 chr12 - 3766 2 novel_not_in_catalog ITGB7 novel NA NA NA NA no_subtype FALSE canonical NA NA 524 None 2 23 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.6991.2 chr12 - 2984 14 novel_in_catalog ITGB7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 33 None 2 5 0 FALSE 0 0 NA C coding 359 1077 37 1113 PB.293.1 chr1 + 2917 11 novel_not_in_catalog ZMPSTE24 novel NA NA NA NA no_subtype FALSE canonical NA NA 1193 None 110 11 1 TRUE 0 0 NA B coding 273 819 1 819 PB.293.2 chr1 + 2821 11 novel_not_in_catalog ZMPSTE24 novel NA NA NA NA no_subtype FALSE canonical NA NA 1260 None 2 10 1 TRUE 0 0 NA B coding 263 789 35 823 PB.293.3 chr1 + 1480 1 incomplete-splice_match ZMPSTE24 ENST00000372759.3 3108 10 1621 8 no_subtype FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1082.6 chr1 - 3633 23 novel_in_catalog TMEM63A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 32 None 2 7 0 FALSE 0 0 NA C coding 618 1854 47 1900 PB.4965.6 chr8 - 3859 2 novel_in_catalog NCOA2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 121 None 2 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5974.8 chr10 + 4294 16 novel_in_catalog SEMA4G novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3171 None 4 5 0 FALSE 0 0 NA B coding 838 2514 429 2942 PB.2373.1 chr3 - 1423 12 full-splice_match ATG3 ENST00000283290.9 1570 12 84 63 no_subtype FALSE canonical NA NA 423 None 99 2 0 FALSE 0 0 NA A coding 314 942 352 1293 PB.9126.1 chr17 - 1764 14 full-splice_match DNAJC7 ENST00000457167.8 2022 14 212 46 no_subtype FALSE canonical NA NA 102 None 20 0 0 FALSE 0 0 NA C coding 494 1482 26 1507 PB.7749.4 chr14 + 2533 5 novel_in_catalog HIF1A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1209 None 2 11 0 FALSE 0 0 NA C coding 300 900 459 1358 PB.5974.6 chr10 + 3939 16 novel_in_catalog SEMA4G novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2815 None 4 4 1 FALSE 0 0 NA B coding 838 2514 73 2586 PB.9126.2 chr17 - 3103 8 novel_in_catalog DNAJC7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 86 None 2 14 0 FALSE 0 0 NA C coding 309 927 10 936 PB.7661.3 chr14 + 2498 2 genic_intron novelGene_343 novel NA NA NA NA no_subtype TRUE canonical NA NA 1494 None 2 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7661.2 chr14 + 2916 5 full-splice_match FAM177A1 ENST00000280987.8 2927 5 3 8 no_subtype FALSE canonical NA NA 562 None 13 23 0 FALSE 0 0 NA C coding 236 708 59 766 PB.7661.1 chr14 + 2943 6 full-splice_match FAM177A1 ENST00000382406.7 858 6 -101 -1984 no_subtype FALSE canonical NA NA 593 None 7 27 1 FALSE 0 0 NA C coding 213 639 159 797 PB.5974.3 chr10 + 4312 16 novel_in_catalog SEMA4G novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3186 None 13 4 0 FALSE 0 0 NA B coding 843 2529 429 2957 PB.4102.1 chr6 + 1690 2 full-splice_match PLN ENST00000357525.5 2001 2 0 311 no_subtype FALSE canonical NA NA 95 None 10 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4102.2 chr6 + 1597 1 novel_in_catalog PLN novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3948.2 chr6 - 1801 6 full-splice_match NFKBIE ENST00000619360.4 2327 6 -6 532 no_subtype FALSE canonical NA NA 559 None 8 7 0 FALSE 0 0 NA A coding 361 1083 195 1277 PB.10489.2 chr20 + 2725 7 novel_not_in_catalog TPD52L2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1039 None 2 21 0 FALSE 0 0 NA C coding 349 1047 86 1132 PB.7747.3 chr14 + 3244 1 genic_intron novelGene_585 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 29 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1710.6 chr2 - 4623 9 novel_not_in_catalog WIPF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 116 None 2 23 0 TRUE 0 0 NA C coding 503 1509 155 1663 PB.2811.1 chr4 - 2061 14 novel_not_in_catalog UGDH novel NA NA NA NA no_subtype TRUE canonical NA NA 158 None 83 3 1 TRUE 0 0 NA A coding 494 1482 166 1647 PB.6856.1 chr12 + 2979 5 full-splice_match GOLT1B ENST00000229314.9 3227 5 -3 251 no_subtype FALSE canonical NA NA 490 None 71 24 0 FALSE 0 0 NA A coding 138 414 113 526 PB.8012.2 chr15 + 2858 3 novel_not_in_catalog OIP5-AS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 725 None 10 27 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.8012.3 chr15 + 2803 2 novel_not_in_catalog OIP5-AS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 660 None 127 25 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.1621.1 chr2 + 2659 1 novel_in_catalog ARHGAP15 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 10 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1082.3 chr1 - 2809 24 novel_in_catalog TMEM63A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 69 None 23 6 1 FALSE 0 0 NA C coding 807 2421 84 2504 PB.3867.3 chr6 + 2642 14 full-splice_match ZNF76 ENST00000373953.7 2716 14 71 3 no_subtype FALSE canonical NA NA 1803 None 20 6 0 FALSE 0 0 NA C coding 570 1710 196 1905 PB.4381.14 chr7 - 1360 9 novel_not_in_catalog TRGC1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 74 None 2 18 4 TRUE 0 0 NA A coding 126 378 35 412 PB.4381.17 chr7 - 1550 6 fusion TRGC1,TRGV9 novel NA NA NA NA no_subtype FALSE canonical NA NA 246 None 6 2 1 TRUE 0 0 NA B coding 141 423 200 622 PB.743.1 chr1 + 3434 5 novel_not_in_catalog SLC25A44 novel NA NA NA NA no_subtype FALSE canonical NA NA 2962 None 40 20 1 TRUE 0 0 NA A coding 314 942 141 1082 PB.4381.11 chr7 - 1655 8 fusion TRGC1,TRGC2,TRGV9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 245 None 3 1 0 TRUE 0 0 NA B coding 340 1020 200 1219 PB.4381.10 chr7 - 1607 8 fusion TRGC1,TRGV7,TRGC2,TRGV8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 196 None 22 4 0 TRUE 0 0 NA B coding 143 429 743 1171 PB.3867.4 chr6 + 2967 6 novel_not_in_catalog ZNF76 novel NA NA NA NA no_subtype FALSE canonical NA NA 2791 None 2 7 2 TRUE 0 0 NA C coding 219 657 1566 2222 PB.2569.2 chr3 - 3551 16 novel_not_in_catalog MECOM novel NA NA NA NA no_subtype FALSE canonical NA NA 69 None 2 0 0 FALSE 0 0 NA B coding 1123 3369 43 3411 PB.5487.3 chr9 - 2666 6 novel_not_in_catalog PDCL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 105 None 2 20 1 TRUE 0 0 NA B coding 283 849 111 959 PB.8692.1 chr16 - 1448 2 antisense novelGene_NFATC3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1360 None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4346.1 chr7 - 1681 13 full-splice_match CPVL ENST00000265394.9 2091 13 1 409 no_subtype FALSE canonical NA NA 108 None 27 2 0 FALSE 0 0 NA C coding 472 1416 131 1546 PB.7146.1 chr12 - 2779 1 genic_intron novelGene_797 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.252 chr14 - 2105 10 fusion IGHV4-4,IGHM novel NA NA NA NA no_subtype TRUE non_canonical NA NA 91 None 2 6 1 TRUE 0 0 NA B coding 396 1188 660 1847 PB.2871.1 chr4 - 2666 1 novel_in_catalog COX18 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 10 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1440.1 chr2 + 449 3 full-splice_match TMSB10 ENST00000233143.5 496 3 34 13 no_subtype FALSE canonical NA NA 175 None 2 1 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3268.1 chr5 + 3605 12 incomplete-splice_match MAP3K1 ENST00000399503.3 7011 20 1617 1789 internal_fragment TRUE canonical NA NA 2772 None 6 5 0 FALSE 0 0 NA A coding 947 2841 79 2919 PB.7959.253 chr14 - 2050 11 fusion IGHM,IGHV3-7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 49 None 2 12 2 TRUE 0 0 NA B coding 396 1188 606 1793 PB.3455.16 chr5 + 1536 1 incomplete-splice_match CDC42SE2 ENST00000395246.5 3485 5 1932 18 no_subtype FALSE canonical NA NA NA None 7 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4725.5 chr7 + 2001 9 novel_in_catalog ZYX novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1471 None 2 2 0 FALSE 0 0 NA C coding 415 1245 329 1573 PB.4725.3 chr7 + 2220 10 full-splice_match ZYX ENST00000322764.9 2493 10 268 5 no_subtype FALSE canonical NA NA 1691 None 42 3 1 FALSE 0 0 NA C coding 572 1716 78 1793 PB.3455.13 chr5 + 2805 4 novel_not_in_catalog CDC42SE2 novel NA NA NA NA no_subtype FALSE canonical NA NA 785 None 2 26 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.716.6 chr1 + 2957 23 novel_in_catalog ADAM15 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2643 None 2 7 1 FALSE 0 0 NA B coding 547 1641 1043 2683 PB.6730.1 chr11 - 1484 1 full-splice_match RP11-676M6.1 ENST00000526843.2 742 1 -147 -595 no_subtype FALSE canonical NA NA NA None 48 0 0 FALSE 0 0 NA A coding 189 567 147 713 PB.4050.1 chr6 + 1477 1 novel_in_catalog PRDM1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6838.1 chr12 + 1792 12 full-splice_match DDX47 ENST00000358007.7 1817 12 17 8 no_subtype FALSE canonical NA NA 1241 None 35 2 0 FALSE 0 0 NA C coding 455 1365 6 1370 PB.6838.2 chr12 + 2906 11 novel_not_in_catalog DDX47 novel NA NA NA NA no_subtype FALSE canonical NA NA 2363 None 2 13 0 FALSE 0 0 NA C coding 252 756 15 770 PB.6838.3 chr12 + 2813 10 novel_in_catalog DDX47 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2261 None 3 15 0 FALSE 0 0 NA C coding 222 666 6 671 PB.8289.1 chr15 + 3723 15 full-splice_match SEMA4B ENST00000332496.10 3781 15 19 39 no_subtype FALSE canonical NA NA 1995 None 5 7 0 FALSE 0 0 NA C coding 837 2511 222 2732 PB.8289.2 chr15 + 3748 14 full-splice_match SEMA4B ENST00000411539.6 3807 14 15 44 no_subtype FALSE canonical NA NA 2019 None 3 7 0 FALSE 0 0 NA C coding 832 2496 261 2756 PB.457.1 chr1 - 1388 3 full-splice_match BCL10 ENST00000370580.5 2819 3 501 930 no_subtype FALSE canonical NA NA 294 None 8 9 0 FALSE 0 0 NA A coding 233 699 238 936 PB.6991.18 chr12 - 2659 15 novel_in_catalog ITGB7 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 50 None 2 1 0 FALSE 0 0 NA C coding 766 2298 131 2428 PB.6991.19 chr12 - 2751 17 novel_not_in_catalog ITGB7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 50 None 2 3 2 TRUE 0 0 NA C coding 758 2274 247 2520 PB.10487.1 chr20 + 1840 7 full-splice_match ZGPAT ENST00000355969.10 1871 7 29 2 no_subtype FALSE canonical NA NA 1480 None 41 2 0 FALSE 0 0 NA C coding 511 1533 84 1616 PB.3960.1 chr6 - 2636 13 full-splice_match MUT ENST00000274813.3 3749 13 -72 1185 no_subtype FALSE canonical NA NA 161 None 39 0 0 FALSE 0 0 NA A coding 750 2250 201 2450 PB.8987.1 chr17 - 3623 1 antisense novelGene_MAP2K3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 29 0 FALSE 0 0 NA A coding 119 357 2844 3200 PB.6991.12 chr12 - 2763 16 novel_not_in_catalog ITGB7 novel NA NA NA NA no_subtype FALSE canonical NA NA 83 None 8 3 1 FALSE 0 0 NA C coding 798 2394 139 2532 PB.6991.13 chr12 - 3069 16 novel_not_in_catalog ITGB7 novel NA NA NA NA no_subtype FALSE canonical NA NA 48 None 2 3 0 FALSE 0 0 NA C coding 798 2394 444 2837 PB.2639.1 chr3 - 1285 1 full-splice_match RPL4P4 ENST00000422486.1 1284 1 79 -80 no_subtype FALSE canonical NA NA NA None 2 0 0 FALSE 0 0 NA A coding 230 690 138 827 PB.6991.16 chr12 - 2693 15 novel_in_catalog ITGB7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 65 None 31 1 0 FALSE 0 0 NA C coding 798 2394 69 2462 PB.1325.1 chr2 + 1484 9 full-splice_match EPCAM ENST00000263735.8 1724 9 223 17 no_subtype FALSE canonical NA NA 1038 None 569 2 0 FALSE 0 0 NA C coding 314 942 136 1077 PB.716.7 chr1 + 2919 23 novel_not_in_catalog ADAM15 novel NA NA NA NA no_subtype FALSE canonical NA NA 2605 None 8 3 0 FALSE 0 0 NA B coding 547 1641 1005 2645 PB.2496.3 chr3 - 2784 20 novel_not_in_catalog COPB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 31 None 2 1 1 TRUE 0 0 NA C coding 825 2475 38 2512 PB.10520.2 chr21 + 2898 1 incomplete-splice_match BACH1 ENST00000286800.7 5669 5 2767 5 no_subtype FALSE canonical NA NA NA None 2 31 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10832.3 chr22 - 3741 13 full-splice_match CERK ENST00000216264.12 4450 13 34 675 no_subtype FALSE canonical NA NA 221 None 2 10 0 FALSE 0 0 NA C coding 537 1611 80 1690 PB.10520.1 chr21 + 5635 5 full-splice_match BACH1 ENST00000286800.7 5669 5 26 8 no_subtype FALSE canonical NA NA 1893 None 51 21 0 FALSE 0 0 NA C coding 736 2208 118 2325 PB.55.2 chr1 - 2917 25 novel_not_in_catalog EXOSC10 novel NA NA NA NA no_subtype FALSE canonical NA NA 135 None 5 6 0 TRUE 0 0 NA B coding 691 2073 25 2097 PB.55.1 chr1 - 2770 26 novel_not_in_catalog EXOSC10 novel NA NA NA NA no_subtype FALSE canonical NA NA 136 None 105 4 0 TRUE 0 0 NA B coding 885 2655 26 2680 PB.3424.3 chr5 - 2916 2 genic_intron novelGene_1026 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1640 None 15 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1710.9 chr2 - 3413 8 full-splice_match WIPF1 ENST00000392547.6 4587 8 -26 1200 no_subtype FALSE canonical NA NA 88 None 5 8 0 FALSE 0 0 NA C coding 503 1509 127 1635 PB.6676.3 chr11 + 3488 17 novel_not_in_catalog PHLDB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2145 None 4 4 3 FALSE 0 0 NA B coding 692 2076 2 2077 PB.7353.1 chr12 - 1437 4 full-splice_match RILPL2 ENST00000280571.9 6141 4 -4 4708 no_subtype FALSE canonical NA NA 640 None 3 14 1 FALSE 0 0 NA A coding 211 633 302 934 PB.2595.3 chr3 + 4205 26 novel_not_in_catalog ECT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2886 None 2 11 3 FALSE 0 0 NA C coding 547 1641 1333 2973 PB.9640.4 chr19 + 1379 1 incomplete-splice_match MIDN ENST00000300952.6 3790 8 2061 351 no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3877.1 chr6 + 1843 12 full-splice_match MAPK13 ENST00000211287.8 2052 12 197 12 no_subtype FALSE canonical NA NA 1083 None 18 2 0 FALSE 0 0 NA A coding 365 1095 66 1160 PB.7162.1 chr12 - 1697 1 full-splice_match RP11-887P2.3 ENST00000548270.1 765 1 -17 -915 no_subtype FALSE canonical NA NA NA None 81 7 0 FALSE 0 0 NA A coding 254 762 18 779 PB.9302.9 chr17 - 3606 19 novel_not_in_catalog PECAM1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 154 None 3 5 3 TRUE 0 0 NA B coding 728 2184 340 2523 PB.4717.1 chr7 - 3415 2 novel_not_in_catalog BRAF novel NA NA NA NA no_subtype FALSE canonical NA NA 2585 None 2 23 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.2095.4 chr3 + 2747 6 genic_intron novelGene_366 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1040 None 4 23 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.1649.7 chr2 - 2738 25 novel_not_in_catalog PRPF40A novel NA NA NA NA no_subtype FALSE canonical NA NA 31 None 2 3 0 FALSE 0 0 NA C coding 840 2520 218 2737 PB.2664.3 chr3 + 3119 1 incomplete-splice_match LPP ENST00000617246.4 18220 11 15098 4 no_subtype FALSE canonical NA NA NA None 4 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1649.5 chr2 - 2910 27 novel_not_in_catalog PRPF40A novel NA NA NA NA no_subtype FALSE canonical NA NA 23 None 2 2 0 FALSE 0 0 NA C coding 915 2745 61 2805 PB.1649.4 chr2 - 2929 26 novel_not_in_catalog PRPF40A novel NA NA NA NA no_subtype TRUE canonical NA NA 106 None 5 4 0 FALSE 0 0 NA C coding 919 2757 68 2824 PB.2072.2 chr3 + 1517 1 incomplete-splice_match TGFBR2 ENST00000359013.4 4605 8 3051 38 no_subtype FALSE canonical NA NA NA None 6 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10193.1 chr19 + 3143 4 novel_not_in_catalog ZNF776 novel NA NA NA NA no_subtype FALSE canonical NA NA 377 None 2 12 1 TRUE 0 0 NA A coding 518 1554 218 1771 PB.1649.9 chr2 - 1703 16 incomplete-splice_match PRPF40A ENST00000410080.5 8048 26 520 5825 internal_fragment FALSE canonical NA NA 106 None 2 2 0 FALSE 0 0 NA C coding 545 1635 68 1702 PB.8580.1 chr16 + 2694 6 full-splice_match ARMC5 ENST00000268314.8 3612 6 916 2 no_subtype FALSE canonical NA NA 1610 None 26 2 0 FALSE 0 0 NA A coding 771 2313 106 2418 PB.10352.11 chr20 - 2955 19 novel_in_catalog RBM39 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 296 None 2 9 0 FALSE 0 0 NA C coding 247 741 854 1594 PB.2754.5 chr4 - 3350 10 novel_not_in_catalog FBXL5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 181 None 2 11 0 TRUE 0 0 NA C coding 617 1851 98 1948 PB.6746.1 chr11 + 3514 11 novel_not_in_catalog JAM3 novel NA NA NA NA no_subtype TRUE canonical NA NA 2791 None 29 17 0 TRUE 0 0 NA A coding 310 930 32 961 PB.8202.4 chr15 - 1346 12 novel_not_in_catalog UBL7 novel NA NA NA NA no_subtype FALSE canonical NA NA 29 None 4 1 1 FALSE 0 0 NA C coding 380 1140 105 1244 PB.2754.1 chr4 - 2820 11 full-splice_match FBXL5 ENST00000341285.7 3385 11 81 484 no_subtype FALSE canonical NA NA 128 None 249 1 0 FALSE 0 0 NA C coding 691 2073 45 2117 PB.2532.1 chr3 + 3789 1 incomplete-splice_match TSC22D2 ENST00000361875.7 11154 4 7347 19 no_subtype FALSE canonical NA NA NA None 4 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2754.3 chr4 - 2861 11 novel_in_catalog FBXL5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 161 None 5 4 0 FALSE 0 0 NA C coding 636 1908 243 2150 PB.2492.1 chr3 - 2635 18 full-splice_match CEP70 ENST00000484888.5 1993 18 -1 -641 no_subtype FALSE canonical NA NA 28 None 6 5 0 FALSE 0 0 NA A coding 597 1791 189 1979 PB.7882.1 chr14 - 2779 10 full-splice_match ASB2 ENST00000555019.5 2842 10 61 2 no_subtype TRUE canonical NA NA 297 None 15 6 0 FALSE 0 0 NA A coding 635 1905 371 2275 PB.10347.1 chr20 - 1388 11 novel_not_in_catalog UQCC1 novel NA NA NA NA no_subtype TRUE canonical NA NA 34 None 4 5 1 TRUE 0 0 NA A coding 299 897 11 907 PB.997.2 chr1 + 2954 4 full-splice_match MFSD4A ENST00000465651.1 588 4 0 -2366 no_subtype FALSE canonical NA NA 443 None 5 9 0 FALSE 0 0 NA C coding 97 291 55 345 PB.7429.1 chr13 + 4062 32 novel_in_catalog PDS5B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3718 None 3 5 1 FALSE 0 0 NA B coding 1320 3960 101 4060 PB.3121.5 chr4 - 2014 14 novel_not_in_catalog DDX60L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 98 None 2 8 1 TRUE 0 0 NA B coding 559 1677 337 2013 PB.5671.1 chr10 + 2312 3 incomplete-splice_match TAF3 ENST00000344293.5 4872 7 13 2547 3prime_fragment FALSE canonical NA NA 602 None 4 0 0 FALSE 0 0 NA B coding 706 2118 194 2311 PB.1303.1 chr2 - 1806 1 incomplete-splice_match ZFP36L2 ENST00000282388.3 3696 2 1876 15 no_subtype FALSE canonical NA NA NA None 31 21 0 FALSE 0 0 NA A coding 121 363 349 711 PB.10759.17 chr22 - 2737 2 novel_not_in_catalog DDX17 novel NA NA NA NA no_subtype FALSE canonical NA NA 876 None 2 28 1 TRUE 0 0 NA C coding 129 387 936 1322 PB.7903.1 chr14 - 2097 1 incomplete-splice_match BCL11B ENST00000357195.7 7559 4 5443 20 no_subtype FALSE canonical NA NA NA None 6 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5187.1 chr8 + 3083 2 intergenic novelGene_1224 novel NA NA NA NA no_subtype FALSE canonical NA NA 1584 None 2 21 1 FALSE 0 0 NA A coding 139 417 1097 1513 PB.10732.1 chr22 - 3147 9 full-splice_match FOXRED2 ENST00000216187.10 3933 9 -18 804 no_subtype TRUE canonical NA NA 129 None 2 11 0 FALSE 0 0 NA A coding 684 2052 131 2182 PB.2693.1 chr3 - 641 4 full-splice_match NCBP2 ENST00000321256.9 2169 4 77 1451 no_subtype FALSE canonical NA NA 95 None 2 0 0 FALSE 0 0 NA A coding 156 468 18 485 PB.2846.1 chr4 + 2140 2 novel_not_in_catalog PDGFRA novel NA NA NA NA no_subtype FALSE canonical NA NA 287 None 2 12 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.2048.1 chr3 + 2892 9 incomplete-splice_match KAT2B ENST00000263754.4 4833 18 1927 14 internal_fragment FALSE canonical NA NA 833 None 2 27 1 FALSE 0 0 NA A coding 320 960 65 1024 PB.41.6 chr1 - 6225 13 novel_not_in_catalog RERE novel NA NA NA NA no_subtype FALSE canonical NA NA 51 None 3 13 1 FALSE 0 0 NA B coding 986 2958 589 3546 PB.3331.1 chr5 - 1913 2 novel_not_in_catalog AC113404.1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1238 None 56 3 1 FALSE 0 0 NA A coding 184 552 147 698 PB.213.1 chr1 + 3005 3 antisense novelGene_PUM1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 209 None 2 23 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.213.2 chr1 + 1992 4 antisense novelGene_PUM1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1716 None 2 15 2 FALSE 0 0 NA B coding 176 528 467 994 PB.213.3 chr1 - 2977 1 novel_in_catalog PUM1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.831.2 chr1 - 1469 6 novel_in_catalog TMCO1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 187 None 2 2 0 FALSE 0 0 NA C coding 197 591 118 708 PB.4297.1 chr7 + 3609 2 novel_in_catalog GLCCI1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1526 None 4 17 0 FALSE 0 0 NA A coding 126 378 2788 3165 PB.3521.1 chr5 + 2913 1 genic_intron novelGene_1188 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4424.1 chr7 + 1913 14 full-splice_match CCT6A ENST00000275603.8 2719 14 207 599 no_subtype FALSE canonical NA NA 1535 None 95 3 0 FALSE 0 0 NA C coding 531 1593 13 1605 PB.303.2 chr1 - 3567 3 full-splice_match FOXJ3 ENST00000372571.5 4468 3 881 20 no_subtype FALSE canonical NA NA 192 None 2 18 0 FALSE 0 0 NA C coding 136 408 6 413 PB.5652.1 chr10 + 2590 22 full-splice_match PFKP ENST00000381125.8 2654 22 28 36 no_subtype FALSE canonical NA NA 2273 None 50 6 0 FALSE 0 0 NA A coding 784 2352 49 2400 PB.6043.1 chr10 - 3543 17 full-splice_match SHTN1 ENST00000355371.8 5361 17 392 1426 no_subtype FALSE canonical NA NA 164 None 6 6 0 FALSE 0 0 NA A coding 631 1893 107 1999 PB.4424.5 chr7 + 1775 9 novel_not_in_catalog CCT6A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1744 None 2 13 0 TRUE 0 0 NA C coding 211 633 208 840 PB.10759.10 chr22 - 5837 12 novel_not_in_catalog DDX17 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 87 None 2 30 0 TRUE 0 0 NA C coding 304 912 196 1107 PB.4424.7 chr7 + 1940 9 full-splice_match SUMF2 ENST00000434526.6 2052 9 93 19 no_subtype FALSE canonical NA NA 816 None 7 10 0 FALSE 0 0 NA A coding 272 816 83 898 PB.3677.6 chr5 - 3221 5 novel_not_in_catalog DOK3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 45 None 2 21 3 TRUE 0 0 NA B coding 118 354 248 601 PB.9458.1 chr17 - 1692 6 full-splice_match RAB40B ENST00000571995.5 3859 6 63 2104 no_subtype FALSE canonical NA NA 211 None 2 5 0 FALSE 0 0 NA A coding 278 834 70 903 PB.10759.11 chr22 - 6433 12 novel_in_catalog DDX17 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 361 None 23 28 1 FALSE 0 0 NA C coding 407 1221 312 1532 PB.520.3 chr1 - 2819 5 full-splice_match EXTL2 ENST00000370114.7 3985 5 1160 6 no_subtype FALSE canonical NA NA 206 None 2 13 1 FALSE 0 0 NA C coding 330 990 278 1267 PB.10828.1 chr22 + 2928 12 full-splice_match GTSE1 ENST00000454366.1 3112 12 181 3 no_subtype TRUE canonical NA NA 2167 None 4 9 0 FALSE 0 0 NA A coding 739 2217 32 2248 PB.1340.5 chr2 - 3171 16 novel_not_in_catalog MTIF2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 889 None 2 8 1 TRUE 0 0 NA B coding 727 2181 964 3144 PB.6340.2 chr11 + 1164 1 incomplete-splice_match FAM111A ENST00000361723.7 3592 4 2425 4 no_subtype FALSE canonical NA NA NA None 6 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9273.1 chr17 + 1798 15 novel_not_in_catalog RPS6KB1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1390 None 27 4 1 TRUE 0 0 NA A coding 523 1569 57 1625 PB.8109.1 chr15 + 4023 13 full-splice_match TCF12 ENST00000343827.7 3956 13 -67 0 no_subtype FALSE canonical NA NA 1673 None 3 5 0 FALSE 0 0 NA A coding 512 1536 124 1659 PB.6340.1 chr11 + 1918 2 genic FAM111A novel NA NA NA NA no_subtype TRUE canonical NA NA 1228 None 3 13 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.4206.3 chr6 - 2923 7 full-splice_match MTRF1L ENST00000464135.5 3651 7 7 721 no_subtype FALSE canonical NA NA 252 None 26 12 0 FALSE 0 0 NA C coding 238 714 395 1108 PB.9289.1 chr17 + 1444 5 full-splice_match TACO1 ENST00000258975.6 1469 5 23 2 no_subtype FALSE canonical NA NA 882 None 15 2 0 FALSE 0 0 NA A coding 297 891 190 1080 PB.5679.1 chr10 + 4137 18 novel_not_in_catalog DHTKD1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3094 None 2 12 0 TRUE 0 0 NA A coding 919 2757 82 2838 PB.11030.1 chrX - 1745 11 full-splice_match HDAC8 ENST00000373573.7 2014 11 260 9 no_subtype FALSE canonical NA NA 193 None 9 3 0 FALSE 0 0 NA C coding 377 1131 83 1213 PB.2556.3 chr3 + 3000 9 full-splice_match MFSD1 ENST00000465624.5 1029 9 28 -1999 no_subtype FALSE canonical NA NA 816 None 2 13 0 FALSE 0 0 NA C coding 150 450 368 817 PB.5100.3 chr8 - 2188 8 full-splice_match DERL1 ENST00000259512.8 3340 8 164 988 no_subtype FALSE canonical NA NA 290 None 77 9 0 FALSE 0 0 NA C coding 251 753 138 890 PB.5460.11 chr9 - 5616 24 fusion RP11-9M16.2,AKNA novel NA NA NA NA no_subtype FALSE canonical NA NA 33 None 8 12 2 TRUE 0 0 NA B coding 1439 4317 373 4689 PB.1276.1 chr2 - 3155 16 full-splice_match CEBPZ ENST00000234170.9 3463 16 128 180 no_subtype FALSE canonical NA NA 174 None 34 1 0 FALSE 0 0 NA C coding 1045 3135 19 3153 PB.5837.3 chr10 - 4118 8 full-splice_match DNAJB12 ENST00000338820.7 4360 8 233 9 no_subtype FALSE canonical NA NA 152 None 3 15 0 FALSE 0 0 NA C coding 375 1125 20 1144 PB.1276.3 chr2 - 1433 2 incomplete-splice_match CEBPZ ENST00000234170.9 3463 16 128 1902 internal_fragment FALSE canonical NA NA 174 None 4 0 0 FALSE 0 0 NA C coding 471 1413 19 1431 PB.1276.2 chr2 - 2888 13 novel_in_catalog CEBPZ novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 159 None 2 1 0 FALSE 0 0 NA C coding 961 2883 4 2886 PB.9394.4 chr17 - 2700 3 novel_not_in_catalog SRSF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 534 None 2 5 1 TRUE 0 0 NA C coding 209 627 209 835 PB.5460.12 chr9 - 5498 23 fusion RP11-9M16.2,AKNA novel NA NA NA NA no_subtype FALSE canonical NA NA 33 None 3 9 0 FALSE 0 0 NA B coding 1439 4317 255 4571 PB.1535.4 chr2 + 3383 11 novel_not_in_catalog LIMS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3334 None 2 16 0 TRUE 0 0 NA C coding 362 1086 132 1217 PB.6794.9 chr12 + 2043 16 novel_not_in_catalog PTPN6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1858 None 16 1 0 TRUE 0 0 NA C coding 520 1560 119 1678 PB.11088.1 chrX - 2645 2 genic RP1-232L22__B.1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1677 None 8 4 0 FALSE 0 0 NA A coding 319 957 729 1685 PB.6107.2 chr11 - 1630 10 full-splice_match SIGIRR ENST00000431843.6 1720 10 87 3 no_subtype FALSE canonical NA NA 67 None 25 3 0 FALSE 0 0 NA C coding 410 1230 221 1450 PB.3771.1 chr6 + 3129 1 genic_intron novelGene_169 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.788.1 chr1 + 2819 17 full-splice_match NCSTN ENST00000294785.9 2936 17 112 5 no_subtype FALSE canonical NA NA 2020 None 238 4 0 FALSE 0 0 NA C coding 709 2127 14 2140 PB.1327.1 chr2 + 4254 10 full-splice_match MSH6 ENST00000234420.9 7476 10 66 3156 no_subtype FALSE canonical NA NA 4087 None 12 2 0 FALSE 0 0 NA A coding 1360 4080 87 4166 PB.6215.1 chr11 + 3134 3 antisense novelGene_RRAS2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2932 None 4 34 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.4688.2 chr7 - 5882 4 novel_not_in_catalog C7orf49 novel NA NA NA NA no_subtype FALSE canonical NA NA 277 None 3 27 1 TRUE 0 0 NA A coding 157 471 141 611 PB.2036.2 chr3 - 3058 2 novel_not_in_catalog DPH3 novel NA NA NA NA no_subtype FALSE canonical NA NA 214 None 5 12 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.8340.2 chr16 - 1451 10 full-splice_match LUC7L ENST00000397783.5 1504 10 32 21 no_subtype FALSE canonical NA NA 153 None 2 1 0 FALSE 0 0 NA C coding 325 975 93 1067 PB.88.2 chr1 - 1528 1 full-splice_match EIF1AXP1 ENST00000419267.1 435 1 -166 -927 no_subtype FALSE canonical NA NA NA None 9 12 0 FALSE 0 0 NA C coding 144 432 167 598 PB.8340.4 chr16 - 3375 10 novel_in_catalog LUC7L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2145 None 2 9 0 FALSE 0 0 NA C coding 285 855 2312 3166 PB.5106.1 chr8 - 1575 14 novel_not_in_catalog ANXA13 novel NA NA NA NA no_subtype TRUE canonical NA NA 72 None 4 1 0 TRUE 0 0 NA B coding 357 1071 58 1128 PB.6929.1 chr12 - 3433 28 full-splice_match RAPGEF3 ENST00000449771.6 6061 28 -269 2897 no_subtype FALSE canonical NA NA 364 None 2 2 0 FALSE 0 0 NA A coding 923 2769 359 3127 PB.5460.19 chr9 - 5871 21 novel_not_in_catalog AKNA novel NA NA NA NA no_subtype FALSE canonical NA NA 390 None 3 16 1 FALSE 0 0 NA B coding 972 2916 117 3032 PB.2036.1 chr3 - 3119 3 full-splice_match DPH3 ENST00000488423.1 3131 3 9 3 no_subtype FALSE canonical NA NA 195 None 27 12 0 FALSE 0 0 NA C coding 82 246 88 333 PB.9169.14 chr17 + 1491 7 novel_in_catalog GRN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1049 None 2 0 0 FALSE 0 0 NA C coding 387 1161 24 1184 PB.4609.1 chr7 - 1547 2 genic_intron novelGene_991 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 469 None 3 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8040.3 chr15 + 2748 17 novel_not_in_catalog TUBGCP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1911 None 2 6 0 FALSE 0 0 NA C coding 491 1473 449 1921 PB.10873.1 chrX - 3940 8 novel_not_in_catalog GPM6B novel NA NA NA NA no_subtype FALSE canonical NA NA 136 None 3 28 1 TRUE 0 0 NA A coding 246 738 133 870 PB.11003.1 chrX - 2416 13 full-splice_match LAS1L ENST00000374807.9 2386 13 -32 2 no_subtype FALSE canonical NA NA 307 None 3 5 0 FALSE 0 0 NA A coding 717 2151 72 2222 PB.143.4 chr1 - 3007 6 full-splice_match SRSF10 ENST00000492112.2 1631 6 -105 -1271 no_subtype FALSE canonical NA NA 234 None 109 8 0 FALSE 0 0 NA C coding 262 786 170 955 PB.1883.1 chr2 + 4682 6 novel_not_in_catalog SGPP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 3190 None 5 29 0 TRUE 0 0 NA A coding 399 1197 63 1259 PB.8360.1 chr16 + 3387 23 incomplete-splice_match BAIAP3 ENST00000397488.6 4583 34 1194 2 internal_fragment FALSE canonical NA NA 2329 None 2 7 0 FALSE 0 0 NA A coding 793 2379 52 2430 PB.3869.1 chr6 + 3689 9 novel_not_in_catalog PPARD novel NA NA NA NA no_subtype FALSE canonical NA NA 1346 None 30 11 0 TRUE 0 0 NA B coding 441 1323 269 1591 PB.3869.3 chr6 + 3658 8 novel_not_in_catalog PPARD novel NA NA NA NA no_subtype FALSE canonical NA NA 1307 None 16 13 1 TRUE 0 0 NA B coding 441 1323 230 1552 PB.10914.2 chrX - 1828 10 full-splice_match SRPX ENST00000378533.3 1874 10 39 7 no_subtype FALSE canonical NA NA 165 None 2 6 0 FALSE 0 0 NA C coding 464 1392 69 1460 PB.2916.1 chr4 - 1443 1 incomplete-splice_match LIN54 ENST00000446851.6 4083 13 2632 9 no_subtype FALSE canonical NA NA NA None 6 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10101.1 chr19 + 4043 25 novel_not_in_catalog TRPM4 novel NA NA NA NA no_subtype TRUE canonical NA NA 3716 None 33 5 1 FALSE 0 0 NA A coding 737 2211 73 2283 PB.10914.1 chrX - 1786 9 full-splice_match SRPX ENST00000544439.5 1842 9 46 10 no_subtype FALSE canonical NA NA 183 None 2 7 0 FALSE 0 0 NA C coding 444 1332 87 1418 PB.8115.2 chr15 + 1161 1 full-splice_match RP11-123C21.1 ENST00000331871.3 207 1 10 -964 no_subtype FALSE canonical NA NA NA None 5 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7929.1 chr14 + 7268 45 incomplete-splice_match DYNC1H1 ENST00000360184.8 14333 78 7062 3 internal_fragment FALSE canonical NA NA 6914 None 2 4 1 FALSE 0 0 NA B coding 2305 6915 126 7040 PB.1152.1 chr1 - 2970 1 genic_intron novelGene_1423 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 29 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3057.1 chr4 + 1832 4 full-splice_match SCOC ENST00000394203.7 1999 4 158 9 no_subtype FALSE canonical NA NA 246 None 4 10 0 FALSE 0 0 NA C coding 122 366 21 386 PB.958.1 chr1 - 2738 3 novel_not_in_catalog LMOD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 465 None 96 2 1 FALSE 0 0 NA A coding 674 2022 205 2226 PB.1204.1 chr2 + 2664 4 antisense novelGene_TTC32_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2420 None 2 19 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.23.1 chr1 - 1644 5 novel_not_in_catalog C1orf174 novel NA NA NA NA no_subtype FALSE canonical NA NA 107 None 12 11 0 TRUE 0 0 NA B coding 243 729 93 821 PB.23.2 chr1 - 1641 4 novel_not_in_catalog C1orf174 novel NA NA NA NA no_subtype FALSE canonical NA NA 111 None 2 12 0 FALSE 0 0 NA B coding 65 195 624 818 PB.8831.3 chr17 - 7267 43 full-splice_match PRPF8 ENST00000304992.10 7295 43 20 8 no_subtype FALSE canonical NA NA 83 None 42 2 0 FALSE 0 0 NA C coding 2335 7005 95 7099 PB.11064.1 chrX + 2677 1 novel_in_catalog APOOL novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10355.1 chr20 - 2915 2 novel_not_in_catalog NORAD novel NA NA NA NA no_subtype FALSE canonical NA NA 1469 None 6 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1038.2 chr1 - 3163 20 full-splice_match INTS7 ENST00000366994.7 4417 20 -2 1256 no_subtype FALSE canonical NA NA 201 None 2 2 0 FALSE 0 0 NA C coding 962 2886 108 2993 PB.8831.4 chr17 - 7414 42 full-splice_match PRPF8 ENST00000572621.5 7445 42 23 8 no_subtype FALSE canonical NA NA 343 None 19 4 0 FALSE 0 0 NA C coding 2335 7005 244 7248 PB.2655.3 chr3 + 4295 8 novel_not_in_catalog ST6GAL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3120 None 2 20 1 TRUE 0 0 NA B coding 406 1218 341 1558 PB.7449.1 chr13 - 1312 1 genic_intron novelGene_407 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4281.1 chr7 - 1291 6 full-splice_match ACTB ENST00000331789.9 1917 6 108 518 no_subtype FALSE canonical NA NA 78 None 12223 0 0 FALSE 0 0 NA C coding 375 1125 85 1209 PB.476.2 chr1 + 3302 4 novel_not_in_catalog LRRC8D novel NA NA NA NA no_subtype FALSE canonical NA NA 385 None 2 2 0 FALSE 0 0 NA C coding 858 2574 388 2961 PB.4281.4 chr7 - 510 1 incomplete-splice_match ACTB ENST00000425660.5 1845 7 1334 2 no_subtype FALSE canonical NA NA NA None 5 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4281.5 chr7 - 1746 6 novel_not_in_catalog ACTB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 78 None 2 7 0 TRUE 0 0 NA C coding 359 1077 85 1161 PB.4281.6 chr7 - 1452 5 novel_not_in_catalog ACTB novel NA NA NA NA no_subtype FALSE canonical NA NA 73 None 4 6 0 TRUE 0 0 NA C coding 257 771 89 859 PB.4281.8 chr7 - 1752 7 novel_not_in_catalog ACTB novel NA NA NA NA no_subtype FALSE canonical NA NA 78 None 3 5 1 TRUE 0 0 NA C coding 358 1074 85 1158 PB.4281.9 chr7 - 1623 5 novel_not_in_catalog ACTB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 23 None 2 5 1 TRUE 0 0 NA C coding 332 996 34 1029 PB.8368.1 chr16 + 3004 6 novel_not_in_catalog HN1L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1275 None 66 13 1 TRUE 0 0 NA A coding 190 570 31 600 PB.730.1 chr1 + 1681 15 novel_not_in_catalog DAP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1313 None 13 3 1 TRUE 0 0 NA B coding 398 1194 203 1396 PB.2655.4 chr3 + 3460 1 genic_intron novelGene_1352 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10669.1 chr22 + 3111 16 novel_not_in_catalog SUSD2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2812 None 2 2 0 TRUE 0 0 NA A coding 822 2466 34 2499 PB.10428.6 chr20 - 1803 1 genic_intron novelGene_470 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA A coding 150 450 431 880 PB.7959.2 chr14 - 1474 7 fusion IGHA2,IGHV4-4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 18 2 TRUE 0 0 NA B coding 158 474 11 484 PB.7230.2 chr12 - 2093 11 full-splice_match CORO1C ENST00000261401.7 3892 11 72 1727 no_subtype FALSE canonical NA NA 96 None 70 4 0 FALSE 0 0 NA A coding 474 1422 102 1523 PB.1960.8 chr2 + 2830 8 incomplete-splice_match SEPT2 ENST00000407971.5 3267 12 433 4 internal_fragment FALSE canonical NA NA 773 None 5 21 0 FALSE 0 0 NA C coding 194 582 160 741 PB.2397.1 chr3 + 1844 7 novel_not_in_catalog UPK1B novel NA NA NA NA no_subtype FALSE canonical NA NA 632 None 2 8 0 FALSE 0 0 NA B coding 200 600 81 680 PB.8991.1 chr17 + 3738 2 genic_intron novelGene_273 novel NA NA NA NA no_subtype FALSE canonical NA NA 3356 None 2 30 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.730.2 chr1 + 1573 14 novel_not_in_catalog DAP3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1204 None 8 1 0 TRUE 0 0 NA B coding 398 1194 94 1287 PB.759.3 chr1 - 3557 6 novel_in_catalog FCRL5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1724 None 2 16 0 FALSE 0 0 NA A coding 150 450 2823 3272 PB.1893.1 chr2 - 3026 18 novel_in_catalog DOCK10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 104 None 2 3 0 FALSE 0 0 NA B coding 763 2289 106 2394 PB.1893.2 chr2 - 3167 2 novel_in_catalog DOCK10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1724 None 2 20 0 FALSE 0 0 NA B coding 212 636 1445 2080 PB.1893.3 chr2 - 2992 1 novel_in_catalog DOCK10 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 20 0 FALSE 0 0 NA B coding 102 306 1447 1752 PB.2605.2 chr3 - 3190 10 full-splice_match GNB4 ENST00000232564.7 6434 10 116 3128 no_subtype FALSE canonical NA NA 129 None 7 18 0 FALSE 0 0 NA A coding 340 1020 172 1191 PB.800.2 chr1 - 1805 11 full-splice_match USF1 ENST00000368021.7 1807 11 0 2 no_subtype FALSE canonical NA NA 120 None 2 5 0 FALSE 0 0 NA C coding 310 930 206 1135 PB.7959.168 chr14 - 1558 9 fusion IGHV3-53,IGHV3-52,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 119 None 2 8 4 TRUE 0 0 NA A coding 196 588 836 1423 PB.7959.169 chr14 - 1536 7 fusion IGHG1,IGHV3-7,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 4 7 3 TRUE 0 0 NA B coding 196 588 814 1401 PB.800.3 chr1 - 1968 10 novel_in_catalog USF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 39 None 2 5 0 FALSE 0 0 NA C coding 244 732 125 856 PB.7959.164 chr14 - 1497 10 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 83 None 2 18 5 TRUE 0 0 NA B coding 196 588 775 1362 PB.7959.165 chr14 - 1508 8 fusion IGHV1-24,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 103 None 2 9 4 TRUE 0 0 NA B coding 196 588 786 1373 PB.7959.166 chr14 - 1574 11 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 16 6 TRUE 0 0 NA B coding 196 588 852 1439 PB.6240.4 chr11 + 3300 2 novel_not_in_catalog HTATIP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1372 None 3 20 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.6240.3 chr11 + 1463 6 full-splice_match HTATIP2 ENST00000419348.6 1477 6 5 9 no_subtype FALSE canonical NA NA 669 None 23 4 0 FALSE 0 0 NA C coding 276 828 65 892 PB.6240.2 chr11 + 1809 5 full-splice_match HTATIP2 ENST00000451739.6 1748 5 -72 11 no_subtype FALSE canonical NA NA 1016 None 2 4 0 FALSE 0 0 NA C coding 242 726 514 1239 PB.6240.1 chr11 + 1313 6 novel_not_in_catalog HTATIP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 526 None 2 3 1 TRUE 0 0 NA C coding 242 726 24 749 PB.7959.163 chr14 - 1526 8 fusion IGHV4-4,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 21 3 TRUE 0 0 NA B coding 196 588 804 1391 PB.7226.4 chr12 - 3673 19 novel_not_in_catalog SART3 novel NA NA NA NA no_subtype FALSE canonical NA NA 323 None 10 7 1 FALSE 0 0 NA B coding 702 2106 799 2904 PB.10349.2 chr20 + 2888 4 full-splice_match ERGIC3 ENST00000279052.10 2846 4 -51 9 no_subtype FALSE canonical NA NA 314 None 4 15 0 FALSE 0 0 NA C coding 145 435 68 502 PB.10349.1 chr20 + 1297 13 full-splice_match ERGIC3 ENST00000348547.6 1359 13 60 2 no_subtype FALSE canonical NA NA 1089 None 26 2 0 FALSE 0 0 NA C coding 383 1149 18 1166 PB.1845.24 chr2 - 5353 31 novel_in_catalog FN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 164 None 2 13 1 FALSE 0 0 NA C coding 1341 4023 641 4663 PB.1596.1 chr2 + 6087 2 genic MIR3679 novel NA NA NA NA no_subtype FALSE canonical NA NA 6039 None 4 39 1 FALSE 0 0 NA B coding 104 312 387 698 PB.356.1 chr1 - 1703 13 full-splice_match SPATA6 ENST00000371847.7 4973 13 -9 3279 no_subtype FALSE canonical NA NA 225 None 2 6 0 FALSE 0 0 NA A coding 488 1464 175 1638 PB.10094.3 chr19 + 2597 7 novel_not_in_catalog SPHK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2171 None 2 3 1 TRUE 0 0 NA B coding 618 1854 138 1991 PB.10766.1 chr22 - 2624 1 incomplete-splice_match CBX6 ENST00000216083.6 3191 5 537 31 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C coding 186 558 115 672 PB.2873.7 chr4 - 2770 1 genic_intron novelGene_686 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10094.4 chr19 + 2974 7 novel_not_in_catalog SPHK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2548 None 2 8 1 TRUE 0 0 NA B coding 618 1854 515 2368 PB.7057.1 chr12 - 1831 1 full-splice_match MIR616 ENST00000385293.1 97 1 -1252 -482 no_subtype FALSE canonical NA NA NA None 6 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.658.6 chr1 - 1686 1 novel_in_catalog MCL1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6860.3 chr12 + 3242 8 full-splice_match ETNK1 ENST00000266517.8 7159 8 98 3819 no_subtype TRUE canonical NA NA 1277 None 10 10 0 FALSE 0 0 NA C coding 363 1089 259 1347 PB.5550.4 chr9 - 2037 9 novel_not_in_catalog ZER1 novel NA NA NA NA no_subtype FALSE canonical NA NA 287 None 4 5 0 TRUE 0 0 NA B coding 552 1656 382 2037 PB.9571.1 chr18 + 3802 9 novel_in_catalog POLI novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2725 None 3 11 0 FALSE 0 0 NA A coding 265 795 620 1414 PB.800.4 chr1 - 1485 1 incomplete-splice_match ARHGAP30 ENST00000368015.1 3887 8 2401 2 no_subtype FALSE canonical NA NA NA None 8 4 0 FALSE 0 0 NA C coding 217 651 68 718 PB.1380.2 chr2 + 2755 8 novel_not_in_catalog CEP68 novel NA NA NA NA no_subtype FALSE canonical NA NA 2440 None 8 3 0 TRUE 0 0 NA B coding 757 2271 163 2433 PB.1157.1 chr1 + 3068 2 novel_not_in_catalog DESI2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1886 None 2 28 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.7134.1 chr12 + 2909 1 antisense novelGene_PAWR_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1226.2 chr2 - 3525 19 novel_in_catalog HADHA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 127 None 3 9 0 FALSE 0 0 NA B coding 602 1806 61 1866 PB.6686.9 chr11 + 2819 14 novel_in_catalog C2CD2L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1748 None 2 3 0 FALSE 0 0 NA A coding 557 1671 287 1957 PB.1026.4 chr1 + 1890 15 novel_not_in_catalog TRAF3IP3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1638 None 2 2 1 FALSE 0 0 NA B coding 443 1329 231 1559 PB.1226.1 chr2 - 2689 21 novel_not_in_catalog HADHA novel NA NA NA NA no_subtype TRUE canonical NA NA 90 None 221 5 0 TRUE 0 0 NA B coding 763 2289 24 2312 PB.6906.6 chr12 + 6808 40 novel_not_in_catalog LRRK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 6152 None 2 8 1 TRUE 0 0 NA B coding 2079 6237 35 6271 PB.5437.2 chr9 - 5700 50 novel_not_in_catalog KIAA0368 novel NA NA NA NA no_subtype TRUE canonical NA NA 66 None 18 2 0 TRUE 0 0 NA B coding 1839 5517 45 5561 PB.5963.1 chr10 + 2969 13 full-splice_match ENTPD7 ENST00000370489.4 3550 13 31 550 no_subtype FALSE canonical NA NA 1730 None 2 6 0 FALSE 0 0 NA A coding 604 1812 148 1959 PB.3137.1 chr4 - 1914 6 full-splice_match DCTD ENST00000357067.7 1931 6 5 12 no_subtype FALSE canonical NA NA 87 None 11 7 0 FALSE 0 0 NA C coding 178 534 95 628 PB.9811.2 chr19 - 1291 9 novel_not_in_catalog STX10 novel NA NA NA NA no_subtype FALSE canonical NA NA 233 None 4 3 0 TRUE 0 0 NA A coding 249 747 199 945 PB.1432.14 chr2 + 3050 13 novel_not_in_catalog TTC31 novel NA NA NA NA no_subtype FALSE canonical NA NA 1744 None 2 12 0 TRUE 0 0 NA B coding 430 1290 1 1290 PB.10675.1 chr22 + 3891 4 genic YES1P1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3134 None 12 27 2 TRUE 0 0 NA A coding 243 729 951 1679 PB.9543.1 chr18 - 3170 1 antisense novelGene_ELP2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 20 0 FALSE 0 0 NA A coding 137 411 2012 2422 PB.6978.1 chr12 - 2094 12 novel_not_in_catalog BIN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 104 None 2 2 0 FALSE 0 0 NA B coding 536 1608 24 1631 PB.800.9 chr1 - 4308 13 novel_not_in_catalog ARHGAP30 novel NA NA NA NA no_subtype FALSE canonical NA NA 347 None 2 8 1 TRUE 0 0 NA C coding 947 2841 700 3540 PB.3137.3 chr4 - 3267 5 novel_in_catalog DCTD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 72 None 2 25 0 FALSE 0 0 NA C coding 138 414 80 493 PB.5201.1 chr9 + 3199 18 full-splice_match VLDLR ENST00000382099.2 3240 18 39 2 no_subtype FALSE canonical NA NA 2553 None 6 4 0 FALSE 0 0 NA A coding 845 2535 52 2586 PB.8603.2 chr16 + 3063 6 novel_in_catalog NOD2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2550 None 2 5 0 FALSE 0 0 NA B coding 793 2379 86 2464 PB.8603.3 chr16 + 7417 7 novel_not_in_catalog NOD2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5828 None 2 36 2 TRUE 0 0 NA B coding 793 2379 67 2445 PB.8603.1 chr16 + 4370 12 novel_in_catalog NOD2 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 3045 None 4 5 0 FALSE 0 0 NA B coding 1013 3039 77 3115 PB.2241.2 chr3 - 1858 1 incomplete-splice_match PBRM1 ENST00000356770.8 7523 28 5149 517 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2933.3 chr4 + 3776 1 genic_intron novelGene_777 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8603.4 chr16 + 5690 8 novel_not_in_catalog NOD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5177 None 2 28 2 TRUE 0 0 NA B coding 330 990 316 1305 PB.8603.5 chr16 + 5757 4 novel_not_in_catalog NOD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4563 None 2 24 1 TRUE 0 0 NA B coding 330 990 2 991 PB.5517.1 chr9 - 3568 5 full-splice_match ANGPTL2 ENST00000373425.7 3707 5 118 21 no_subtype FALSE canonical NA NA 451 None 23 7 0 FALSE 0 0 NA C coding 493 1479 501 1979 PB.1023.1 chr1 + 2813 2 genic_intron novelGene_1391 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 25 None 4 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4434.1 chr7 + 1095 3 full-splice_match VKORC1L1 ENST00000360768.3 5899 3 46 4758 no_subtype FALSE canonical NA NA 363 None 2 6 0 FALSE 0 0 NA C coding 176 528 60 587 PB.8107.1 chr15 + 3403 2 genic_intron novelGene_555 novel NA NA NA NA no_subtype FALSE canonical NA NA 2714 None 2 25 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8107.2 chr15 + 3202 1 genic_intron novelGene_555 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2261.1 chr3 - 1731 6 full-splice_match ARF4 ENST00000303436.10 1660 6 -77 6 no_subtype TRUE canonical NA NA 412 None 128 4 0 FALSE 0 0 NA A coding 180 540 346 885 PB.390.1 chr1 - 3152 9 full-splice_match DHCR24 ENST00000371269.7 4250 9 23 1075 no_subtype FALSE canonical NA NA 307 None 37 8 0 FALSE 0 0 NA A coding 516 1548 77 1624 PB.6098.1 chr10 - 1291 8 full-splice_match ECHS1 ENST00000368547.3 1617 8 317 9 no_subtype FALSE canonical NA NA 127 None 32 7 0 FALSE 0 0 NA A coding 290 870 40 909 PB.4112.1 chr6 - 1965 1 genic_intron novelGene_1065 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.197.1 chr1 - 1389 1 full-splice_match SPCS2P4 ENST00000436160.1 681 1 -19 -689 no_subtype FALSE canonical NA NA NA None 105 2 0 FALSE 0 0 NA A coding 226 678 20 697 PB.4735.1 chr7 - 3129 1 intergenic novelGene_1236 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A coding 111 333 1316 1648 PB.1550.2 chr2 + 3330 11 novel_not_in_catalog SLC20A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2375 None 3 15 0 TRUE 0 0 NA C coding 426 1278 1257 2534 PB.4972.2 chr8 - 2834 14 novel_in_catalog STAU2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 58 None 2 4 0 FALSE 0 0 NA B coding 538 1614 220 1833 PB.8086.1 chr15 - 1923 13 novel_not_in_catalog LEO1 novel NA NA NA NA no_subtype TRUE canonical NA NA 71 None 6 0 0 TRUE 0 0 NA B coding 636 1908 14 1921 PB.4972.4 chr8 - 3110 12 novel_not_in_catalog STAU2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 61 None 2 10 0 TRUE 0 0 NA B coding 479 1437 223 1659 PB.8086.2 chr15 - 1605 10 novel_not_in_catalog LEO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 68 None 2 0 0 TRUE 0 0 NA B coding 531 1593 11 1603 PB.9438.1 chr17 - 1200 5 novel_not_in_catalog MCRIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 31 None 3 4 0 FALSE 0 0 NA A coding 97 291 78 368 PB.8274.1 chr15 - 3661 3 novel_not_in_catalog KLHL25 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 181 None 16 12 0 FALSE 0 0 NA A coding 589 1767 193 1959 PB.339.1 chr1 - 3065 11 full-splice_match TESK2 ENST00000372086.3 3074 11 6 3 no_subtype FALSE canonical NA NA 309 None 24 4 0 FALSE 0 0 NA C coding 571 1713 396 2108 PB.562.2 chr1 + 6300 2 novel_not_in_catalog CEPT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 873 None 3 55 1 TRUE 0 0 NA C coding 117 351 5646 5996 PB.562.1 chr1 + 2048 9 full-splice_match CEPT1 ENST00000357172.8 2198 9 29 121 no_subtype FALSE canonical NA NA 1257 None 4 5 0 FALSE 0 0 NA C coding 416 1248 127 1374 PB.4519.1 chr7 - 1594 9 full-splice_match PON2 ENST00000633531.1 1653 9 55 4 no_subtype FALSE canonical NA NA 140 None 42 2 0 FALSE 0 0 NA A coding 375 1125 4 1128 PB.5983.8 chr10 - 3449 8 incomplete-splice_match MGEA5 ENST00000439817.5 5043 15 1583 11 5prime_fragment FALSE canonical NA NA 510 None 2 19 0 FALSE 0 0 NA C coding 479 1437 13 1449 PB.2289.1 chr3 - 2347 11 full-splice_match SUCLG2 ENST00000307227.9 2352 11 -1 6 no_subtype FALSE canonical NA NA 113 None 4 3 0 FALSE 0 0 NA A coding 432 1296 30 1325 PB.7439.4 chr13 - 3513 25 novel_not_in_catalog SUPT20H novel NA NA NA NA no_subtype FALSE canonical NA NA 47 None 2 8 2 TRUE 0 0 NA B coding 534 1602 141 1742 PB.4376.23 chr7 - 2635 1 genic_intron novelGene_367 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6926.1 chr12 + 1731 2 incomplete-splice_match PCED1B ENST00000546455.5 2328 4 563 34 internal_fragment FALSE canonical NA NA 111 None 6 2 0 FALSE 0 0 NA B coding 432 1296 169 1464 PB.5983.2 chr10 - 3762 15 novel_not_in_catalog MGEA5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 625 None 3 16 1 TRUE 0 0 NA C coding 568 1704 754 2457 PB.5983.3 chr10 - 3473 14 novel_not_in_catalog MGEA5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 333 None 2 14 0 TRUE 0 0 NA C coding 677 2031 135 2165 PB.1206.2 chr2 - 2664 11 genic_intron novelGene_196 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 22 None 2 33 6 FALSE 0 0 NA A coding 124 372 1417 1788 PB.1133.1 chr1 - 5877 20 full-splice_match NID1 ENST00000264187.6 5864 20 -37 24 no_subtype FALSE canonical NA NA 345 None 7 8 0 FALSE 0 0 NA A coding 1247 3741 121 3861 PB.7116.1 chr12 + 1818 3 antisense novelGene_AC092881.1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 268 None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7608.32 chr14 + 1343 9 fusion TRAC,TRAV24 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 806 None 2 5 4 TRUE 0 0 NA A coding 266 798 5 802 PB.7608.33 chr14 + 1461 7 fusion TRAC,TRAV25 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 924 None 2 6 0 TRUE 0 0 NA B coding 152 456 4 459 PB.7608.34 chr14 + 1417 6 fusion TRAC,TRAV25 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 871 None 2 7 1 TRUE 0 0 NA B coding 118 354 67 420 PB.7608.35 chr14 + 1385 9 fusion TRAC,TRAV25 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 839 None 2 7 2 TRUE 0 0 NA B coding 130 390 22 411 PB.7608.36 chr14 + 1472 7 fusion TRAV26-1,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 922 None 2 6 2 TRUE 0 0 NA B coding 154 462 457 918 PB.7608.37 chr14 + 1417 8 fusion TRAV26-1,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 876 None 3 8 3 TRUE 0 0 NA B coding 145 435 438 872 PB.7608.38 chr14 + 1448 7 fusion TRAV26-1,TRAC novel NA NA NA NA no_subtype FALSE canonical NA NA 900 None 3 4 1 TRUE 0 0 NA B coding 147 441 456 896 PB.7608.39 chr14 + 1445 7 fusion TRAV26-1,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 903 None 2 4 1 TRUE 0 0 NA B coding 132 396 95 490 PB.6467.6 chr11 + 1618 4 full-splice_match RBM4 ENST00000310092.11 1694 4 72 4 no_subtype TRUE canonical NA NA 1179 None 35 0 0 FALSE 0 0 NA C coding 364 1092 77 1168 PB.6467.7 chr11 + 1742 4 full-splice_match RBM4 ENST00000408993.6 1763 4 34 -13 no_subtype FALSE canonical NA NA 1303 None 2 1 0 FALSE 0 0 NA C coding 364 1092 201 1292 PB.4233.1 chr6 - 3166 6 novel_not_in_catalog SOD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 93 None 2 22 0 FALSE 0 0 NA C coding 222 666 71 736 PB.6467.2 chr11 + 2772 3 full-splice_match RBM14 ENST00000310137.4 2828 3 48 8 no_subtype FALSE canonical NA NA 1893 None 132 0 0 FALSE 0 0 NA C coding 669 2007 92 2098 PB.6467.3 chr11 + 6117 2 novel_in_catalog RBM14 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 420 None 7 21 0 FALSE 0 0 NA C coding 618 1854 84 1937 PB.5215.1 chr9 - 4738 15 full-splice_match ERMP1 ENST00000339450.9 5376 15 16 622 no_subtype TRUE canonical NA NA 412 None 2 29 1 FALSE 0 0 NA A coding 904 2712 75 2786 PB.4127.1 chr6 + 2761 28 novel_not_in_catalog ENPP3 novel NA NA NA NA no_subtype TRUE canonical NA NA 2489 None 4 5 2 TRUE 0 0 NA A coding 875 2625 29 2653 PB.1257.1 chr2 - 4582 36 full-splice_match XDH ENST00000379416.3 5688 36 2 1104 no_subtype FALSE canonical NA NA 89 None 2 5 0 FALSE 0 0 NA A coding 1333 3999 48 4046 PB.8562.2 chr16 + 2074 12 full-splice_match PRR14 ENST00000300835.8 2198 12 94 30 no_subtype FALSE canonical NA NA 1695 None 2 6 0 FALSE 0 0 NA C coding 585 1755 218 1972 PB.2642.10 chr3 + 3499 10 novel_not_in_catalog SENP2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2788 None 2 19 1 TRUE 0 0 NA C coding 117 351 255 605 PB.8562.1 chr16 + 1933 12 novel_in_catalog PRR14 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1554 None 8 6 0 FALSE 0 0 NA C coding 585 1755 77 1831 PB.2321.1 chr3 - 3062 1 genic_intron novelGene_814 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3104.4 chr4 + 2670 10 full-splice_match GUCY1A3 ENST00000296518.11 4400 10 -190 1920 no_subtype FALSE canonical NA NA 2270 None 4 10 0 FALSE 0 0 NA C coding 690 2070 400 2469 PB.3104.3 chr4 + 2567 10 full-splice_match GUCY1A3 ENST00000506455.5 2715 10 132 16 no_subtype FALSE canonical NA NA 2180 None 5 3 0 FALSE 0 0 NA C coding 690 2070 310 2379 PB.8282.1 chr15 - 4458 23 full-splice_match POLG ENST00000268124.9 4500 23 41 1 no_subtype FALSE canonical NA NA 134 None 13 5 0 FALSE 0 0 NA C coding 1239 3717 294 4010 PB.3104.1 chr4 + 4129 4 genic RP11-588K22.2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 255 None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10879.1 chrX - 2865 2 genic_intron novelGene_134 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2118 None 2 20 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4228.8 chr6 - 2911 14 novel_not_in_catalog EZR novel NA NA NA NA no_subtype FALSE canonical NA NA 25 None 2 21 1 TRUE 0 0 NA C coding 358 1074 99 1172 PB.8931.2 chr17 - 2109 1 novel_in_catalog LINC00675 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA C coding 79 237 112 348 PB.451.1 chr1 + 1511 5 novel_in_catalog RPF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 492 None 3 7 0 FALSE 0 0 NA C coding 229 687 31 717 PB.11142.3 chrX - 2778 23 incomplete-splice_match THOC2 ENST00000355725.8 4930 39 13 2139 internal_fragment FALSE canonical NA NA 92 None 28 1 0 FALSE 0 0 NA B coding 919 2757 22 2778 PB.8931.1 chr17 - 1510 2 full-splice_match LINC00675 ENST00000581851.1 1530 2 0 20 no_subtype FALSE canonical NA NA 494 None 11 4 0 FALSE 0 0 NA C coding 79 237 137 373 PB.5055.2 chr8 - 2638 13 full-splice_match AZIN1 ENST00000347770.8 2857 13 29 190 no_subtype FALSE canonical NA NA 358 None 19 3 0 FALSE 0 0 NA C coding 448 1344 738 2081 PB.5055.3 chr8 - 3848 12 novel_not_in_catalog AZIN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 359 None 2 9 0 TRUE 0 0 NA C coding 363 1089 593 1681 PB.4228.1 chr6 - 2749 15 novel_not_in_catalog EZR novel NA NA NA NA no_subtype TRUE non_canonical NA NA 47 None 2 17 1 TRUE 0 0 NA C coding 411 1233 154 1386 PB.5055.1 chr8 - 2839 12 novel_not_in_catalog AZIN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 357 None 104 4 1 FALSE 0 0 NA C coding 448 1344 589 1932 PB.4228.7 chr6 - 2890 13 novel_in_catalog EZR novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 54 None 3 21 0 FALSE 0 0 NA C coding 386 1158 128 1285 PB.4228.6 chr6 - 2047 1 novel_in_catalog EZR novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA C coding 106 318 339 656 PB.4228.5 chr6 - 3864 13 novel_in_catalog EZR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 47 None 2 35 2 FALSE 0 0 NA C coding 422 1266 121 1386 PB.5055.5 chr8 - 2885 13 novel_not_in_catalog AZIN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 357 None 2 9 2 TRUE 0 0 NA C coding 448 1344 636 1979 PB.8911.1 chr17 + 5638 34 incomplete-splice_match CHD3 ENST00000330494.11 7328 40 1131 559 internal_fragment FALSE canonical NA NA 4900 None 2 5 0 FALSE 0 0 NA A coding 1545 4635 385 5019 PB.6477.1 chr11 - 1409 7 full-splice_match PPP1CA ENST00000376745.8 1476 7 75 -8 no_subtype FALSE canonical NA NA 129 None 311 4 0 FALSE 0 0 NA A coding 330 990 75 1064 PB.9907.1 chr19 + 558 1 full-splice_match CTC-260E6.2 ENST00000497576.1 441 1 -55 -62 no_subtype FALSE canonical NA NA NA None 2 0 0 FALSE 0 0 NA A coding 146 438 56 493 PB.9991.1 chr19 - 1123 9 novel_in_catalog FBL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 92 None 5 5 0 FALSE 0 0 NA A coding 235 705 338 1042 PB.658.5 chr1 - 2537 3 full-splice_match MCL1 ENST00000369026.2 3932 3 -20 1415 no_subtype FALSE canonical NA NA 768 None 24 12 0 FALSE 0 0 NA C coding 350 1050 81 1130 PB.3107.1 chr4 - 3023 6 full-splice_match PDGFC ENST00000502773.5 4165 6 -25 1167 no_subtype FALSE canonical NA NA 634 None 2 13 0 FALSE 0 0 NA A coding 345 1035 517 1551 PB.1864.1 chr2 - 1470 10 full-splice_match RNF25 ENST00000295704.6 1914 10 432 12 no_subtype FALSE canonical NA NA 50 None 8 2 0 FALSE 0 0 NA A coding 459 1377 10 1386 PB.11169.1 chrX - 3581 4 full-splice_match MMGT1 ENST00000305963.2 3738 4 148 9 no_subtype FALSE canonical NA NA 319 None 30 17 0 FALSE 0 0 NA A coding 131 393 241 633 PB.8558.1 chr16 - 1861 1 full-splice_match SEPHS2 ENST00000478753.4 2551 1 307 383 no_subtype FALSE canonical NA NA NA None 23 7 0 FALSE 0 0 NA A coding 330 990 502 1491 PB.3620.2 chr5 - 2154 12 full-splice_match CLINT1 ENST00000411809.6 3440 12 49 1237 no_subtype FALSE canonical NA NA 197 None 59 2 0 FALSE 0 0 NA C coding 625 1875 157 2031 PB.6724.1 chr11 - 3147 2 genic RP11-50B3.4 novel NA NA NA NA no_subtype TRUE canonical NA NA 2490 None 4 17 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.1493.1 chr2 - 1224 8 full-splice_match FAHD2B ENST00000272610.3 1305 8 62 19 no_subtype FALSE canonical NA NA 120 None 5 4 0 FALSE 0 0 NA A coding 314 942 127 1068 PB.7045.2 chr12 - 1624 7 full-splice_match PTGES3 ENST00000448157.6 1017 7 -40 -567 no_subtype FALSE canonical NA NA 327 None 2 5 0 FALSE 0 0 NA C coding 139 417 326 742 PB.7045.1 chr12 - 1581 8 full-splice_match PTGES3 ENST00000262033.10 1920 8 76 263 no_subtype FALSE canonical NA NA 227 None 132 6 0 FALSE 0 0 NA C coding 160 480 226 705 PB.9796.1 chr19 + 1470 1 antisense novelGene_C19orf43_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.718.1 chr1 + 1338 6 full-splice_match SLC50A1 ENST00000368404.8 1300 6 -43 5 no_subtype FALSE canonical NA NA 669 None 6 3 0 FALSE 0 0 NA A coding 221 663 106 768 PB.9426.1 chr17 + 6834 36 novel_not_in_catalog RPTOR novel NA NA NA NA no_subtype FALSE canonical NA NA 5957 None 2 27 0 TRUE 0 0 NA A coding 1335 4005 802 4806 PB.3981.1 chr6 + 2953 6 incomplete-splice_match PHF3 ENST00000262043.7 8233 16 -5 5285 3prime_fragment FALSE canonical NA NA 2841 None 2 0 0 FALSE 0 0 NA C coding 869 2607 346 2952 PB.8976.1 chr17 - 1624 6 full-splice_match MFAP4 ENST00000299610.4 1873 6 24 225 no_subtype FALSE canonical NA NA 67 None 106 5 0 FALSE 0 0 NA C coding 255 765 62 826 PB.5166.1 chr8 + 1182 7 full-splice_match CYC1 ENST00000318911.4 1240 7 55 3 no_subtype FALSE canonical NA NA 891 None 24 2 0 FALSE 0 0 NA A coding 325 975 19 993 PB.8976.2 chr17 - 1931 6 full-splice_match MFAP4 ENST00000395592.6 1932 6 2 -1 no_subtype FALSE canonical NA NA 148 None 3 6 0 FALSE 0 0 NA C coding 279 837 71 907 PB.10667.2 chr22 - 1458 4 novel_in_catalog GSTT2B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 178 None 2 4 0 FALSE 0 0 NA C coding 176 528 67 594 PB.10667.3 chr22 - 3152 2 genic GSTT2B novel NA NA NA NA no_subtype FALSE canonical NA NA 1012 None 4 23 1 TRUE 0 0 NA C coding 118 354 73 426 PB.10667.1 chr22 - 1106 5 full-splice_match GSTT2B ENST00000290765.8 1099 5 -11 4 no_subtype FALSE canonical NA NA 178 None 2 2 0 FALSE 0 0 NA C coding 244 732 67 798 PB.8952.3 chr17 - 3980 20 novel_not_in_catalog SREBF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 88 None 5 8 0 TRUE 0 0 NA B coding 1123 3369 70 3438 PB.8952.2 chr17 - 4138 20 novel_not_in_catalog SREBF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 243 None 7 9 1 TRUE 0 0 NA B coding 1147 3441 153 3593 PB.11125.2 chrX + 1582 5 full-splice_match UBE2A ENST00000628549.1 934 5 151 -799 no_subtype FALSE canonical NA NA 288 None 2 7 0 FALSE 0 0 NA C coding 119 357 58 414 PB.11125.3 chrX + 2691 4 novel_not_in_catalog UBE2A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1398 None 6 12 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.1899.5 chr2 + 1729 8 full-splice_match MFF ENST00000349901.11 1716 8 0 -13 no_subtype FALSE canonical NA NA 889 None 2 2 0 FALSE 0 0 NA C coding 238 714 305 1018 PB.4137.1 chr6 - 1814 7 full-splice_match VNN2 ENST00000326499.10 2118 7 298 6 no_subtype TRUE canonical NA NA 40 None 27 5 0 FALSE 0 0 NA A coding 282 846 542 1387 PB.8952.4 chr17 - 4377 21 novel_not_in_catalog SREBF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 260 None 3 14 0 TRUE 0 0 NA B coding 1116 3348 486 3833 PB.7056.8 chr12 + 2646 20 novel_in_catalog MARS novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2429 None 2 3 1 FALSE 0 0 NA C coding 855 2565 9 2573 PB.946.49 chr1 + 2853 16 incomplete-splice_match PTPRC ENST00000348564.10 4626 30 1494 279 internal_fragment FALSE canonical NA NA 1754 None 8 9 0 FALSE 0 0 NA B coding 568 1704 324 2027 PB.1483.1 chr2 + 2813 3 full-splice_match ITPRIPL1 ENST00000439118.2 1946 3 -45 -822 no_subtype FALSE canonical NA NA 306 None 23 5 0 FALSE 0 0 NA A coding 555 1665 297 1961 PB.6126.15 chr11 + 1431 13 incomplete-splice_match MUC2 ENST00000361558.7 12667 49 11224 12 internal_fragment FALSE canonical NA NA 1067 None 17 2 0 FALSE 0 0 NA B coding 378 1134 151 1284 PB.11078.3 chrX - 2690 13 novel_in_catalog TRMT2B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 124 None 4 10 0 FALSE 0 0 NA C coding 385 1155 314 1468 PB.2356.1 chr3 - 2863 2 antisense novelGene_BBX_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1209 None 7 44 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.5410.2 chr9 + 3152 3 full-splice_match ZNF189 ENST00000374861.7 3134 3 -26 8 no_subtype FALSE canonical NA NA 428 None 7 3 0 FALSE 0 0 NA C coding 612 1836 311 2146 PB.6405.1 chr11 + 4186 31 full-splice_match PLCB3 ENST00000279230.10 4197 31 7 4 no_subtype FALSE canonical NA NA 3621 None 27 5 0 FALSE 0 0 NA A coding 1234 3702 121 3822 PB.185.1 chr1 + 1894 16 novel_not_in_catalog SYTL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1683 None 4 1 0 TRUE 0 0 NA A coding 543 1629 188 1816 PB.9697.2 chr19 - 2656 20 novel_in_catalog SAFB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 251 None 2 3 1 FALSE 0 0 NA C coding 499 1497 917 2413 PB.1912.1 chr2 - 1440 6 antisense novelGene_ITM2C_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1237 None 2 12 2 FALSE 0 0 NA A coding 145 435 812 1246 PB.4916.5 chr8 - 3756 3 novel_in_catalog PCMTD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 98 None 2 39 0 FALSE 0 0 NA C coding 137 411 194 604 PB.9697.1 chr19 - 3100 21 full-splice_match SAFB2 ENST00000252542.8 3371 21 204 67 no_subtype FALSE canonical NA NA 247 None 18 2 0 FALSE 0 0 NA C coding 953 2859 62 2920 PB.9697.6 chr19 - 2960 9 novel_in_catalog SAFB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 247 None 4 3 0 FALSE 0 0 NA C coding 222 666 62 727 PB.9697.7 chr19 - 1587 11 incomplete-splice_match SAFB2 ENST00000252542.8 3371 21 177 1607 internal_fragment FALSE canonical NA NA 274 None 3 0 0 FALSE 0 0 NA C coding 499 1497 89 1585 PB.9697.4 chr19 - 1676 12 incomplete-splice_match SAFB2 ENST00000252542.8 3371 21 201 1494 internal_fragment FALSE canonical NA NA 250 None 2 0 0 FALSE 0 0 NA C coding 537 1611 65 1675 PB.9697.5 chr19 - 2529 10 novel_in_catalog SAFB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 247 None 3 5 0 FALSE 0 0 NA C coding 222 666 62 727 PB.7059.1 chr12 - 1689 15 novel_not_in_catalog DCTN2 novel NA NA NA NA no_subtype TRUE canonical NA NA 149 None 123 4 0 TRUE 0 0 NA A coding 401 1203 114 1316 PB.6763.1 chr12 + 1997 4 full-splice_match ITFG2 ENST00000541659.1 587 4 -113 -1297 no_subtype FALSE canonical NA NA 347 None 4 10 0 FALSE 0 0 NA A coding 147 441 114 554 PB.1649.8 chr2 - 2901 23 incomplete-splice_match PRPF40A ENST00000410080.5 8048 26 75 5072 internal_fragment FALSE canonical NA NA 551 None 2 4 0 FALSE 0 0 NA C coding 875 2625 276 2900 PB.2628.5 chr3 + 3126 20 novel_in_catalog PSMD2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2786 None 2 3 0 FALSE 0 0 NA C coding 484 1452 14 1465 PB.2628.4 chr3 + 2978 21 novel_not_in_catalog PSMD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2638 None 2 11 1 FALSE 0 0 NA C coding 569 1707 1112 2818 PB.804.1 chr1 - 1928 8 full-splice_match B4GALT3 ENST00000319769.9 1911 8 -21 4 no_subtype FALSE canonical NA NA 84 None 18 1 0 FALSE 0 0 NA C coding 393 1179 245 1423 PB.2628.1 chr3 + 1876 15 incomplete-splice_match PSMD2 ENST00000310118.8 3449 21 554 1019 3prime_fragment FALSE canonical NA NA 1808 None 12 0 0 FALSE 0 0 NA C coding 624 1872 5 1876 PB.2628.3 chr3 + 2876 21 novel_not_in_catalog PSMD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2536 None 2 9 0 TRUE 0 0 NA C coding 897 2691 26 2716 PB.2628.2 chr3 + 2885 21 full-splice_match PSMD2 ENST00000310118.8 3449 21 557 7 no_subtype FALSE canonical NA NA 2545 None 314 1 0 FALSE 0 0 NA C coding 908 2724 2 2725 PB.6622.1 chr11 + 2984 1 antisense novelGene_CWF19L2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7181.1 chr12 + 837 1 incomplete-splice_match TMPO ENST00000556029.5 4242 9 3371 35 no_subtype FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2368.1 chr3 + 2558 5 full-splice_match ABHD10 ENST00000273359.7 2590 5 25 7 no_subtype FALSE canonical NA NA 578 None 13 11 0 FALSE 0 0 NA A coding 306 918 3 920 PB.1959.2 chr2 + 3393 25 novel_not_in_catalog ANO7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2620 None 2 8 1 TRUE 0 0 NA B coding 862 2586 43 2628 PB.8904.2 chr17 + 1662 11 novel_not_in_catalog EIF4A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1007 None 2 13 2 FALSE 0 0 NA C coding 286 858 292 1149 PB.2645.2 chr3 - 1419 9 full-splice_match TRA2B ENST00000453386.6 2952 9 107 1426 no_subtype FALSE canonical NA NA 205 None 17 2 0 FALSE 0 0 NA C coding 288 864 170 1033 PB.8904.1 chr17 + 1753 11 full-splice_match EIF4A1 ENST00000293831.12 1756 11 2 1 no_subtype FALSE canonical NA NA 1090 None 60 4 0 FALSE 0 0 NA C coding 406 1218 15 1232 PB.9687.1 chr19 - 1434 11 full-splice_match UBXN6 ENST00000301281.10 1943 11 36 473 no_subtype FALSE canonical NA NA 172 None 22 4 0 FALSE 0 0 NA A coding 441 1323 90 1412 PB.11222.1 chrX + 2756 12 novel_not_in_catalog BRCC3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 911 None 41 9 1 TRUE 0 0 NA A coding 111 333 8 340 PB.8181.1 chr15 + 6361 2 genic_intron novelGene_649 novel NA NA NA NA no_subtype TRUE canonical NA NA 1669 None 7 35 0 FALSE 0 0 NA A coding 105 315 4413 4727 PB.4622.1 chr7 + 2668 7 full-splice_match TES ENST00000358204.8 2782 7 110 4 no_subtype FALSE canonical NA NA 1182 None 224 13 0 FALSE 0 0 NA C coding 421 1263 106 1368 PB.3813.9 chr6 - 3564 25 full-splice_match BAG6 ENST00000375976.8 3644 25 39 41 no_subtype FALSE canonical NA NA 108 None 17 23 2 FALSE 0 0 NA C coding 1126 3378 122 3499 PB.9545.1 chr18 - 3933 8 novel_not_in_catalog TPGS2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 148 None 2 14 0 TRUE 0 0 NA C coding 300 900 64 963 PB.4817.3 chr8 + 3865 28 full-splice_match XPO7 ENST00000433566.8 4519 28 0 654 no_subtype FALSE canonical NA NA 3228 None 14 3 0 FALSE 0 0 NA C coding 1088 3264 56 3319 PB.4817.1 chr8 + 3841 28 full-splice_match XPO7 ENST00000252512.13 4861 28 68 952 no_subtype FALSE canonical NA NA 3202 None 44 1 0 FALSE 0 0 NA C coding 1087 3261 33 3293 PB.10589.2 chr21 + 3162 12 novel_in_catalog RRP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2579 None 3 24 0 FALSE 0 0 NA C coding 365 1095 65 1159 PB.4817.5 chr8 + 3828 3 novel_not_in_catalog XPO7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3554 None 2 16 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.5711.1 chr10 + 2921 8 incomplete-splice_match KIAA1217 ENST00000376451.4 7383 15 1931 2531 internal_fragment FALSE canonical NA NA 2589 None 4 6 0 FALSE 0 0 NA A coding 901 2703 22 2724 PB.7800.1 chr14 - 3395 11 novel_not_in_catalog NUMB novel NA NA NA NA no_subtype TRUE non_canonical NA NA 94 None 2 6 1 FALSE 0 0 NA C coding 592 1776 260 2035 PB.9404.2 chr17 + 2763 17 novel_not_in_catalog TMC8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2233 None 87 5 0 TRUE 0 0 NA B coding 726 2178 332 2509 PB.9404.3 chr17 + 2769 17 novel_not_in_catalog TMC8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2244 None 5 6 1 TRUE 0 0 NA B coding 487 1461 378 1838 PB.4248.1 chr6 - 2662 8 novel_not_in_catalog SFT2D1 novel NA NA NA NA no_subtype FALSE canonical NA NA 139 None 3 17 1 TRUE 0 0 NA C coding 137 411 77 487 PB.7825.1 chr14 - 1885 1 antisense novelGene_JDP2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 4 0 FALSE 0 0 NA A coding 101 303 258 560 PB.1705.1 chr2 - 3535 5 full-splice_match SP3 ENST00000418194.6 3937 5 395 7 no_subtype FALSE canonical NA NA 64 None 19 1 0 FALSE 0 0 NA A coding 496 1488 641 2128 PB.2579.1 chr3 - 2574 1 genic_intron novelGene_1306 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A coding 120 360 1263 1622 PB.199.1 chr1 - 1462 1 incomplete-splice_match PTAFR ENST00000539896.1 4191 3 2711 19 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7457.1 chr13 + 3247 2 novel_not_in_catalog AKAP11 novel NA NA NA NA no_subtype FALSE canonical NA NA 300 None 2 37 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.199.5 chr1 - 1545 1 novel_in_catalog PTAFR novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 2 0 FALSE 0 0 NA B coding 342 1026 42 1067 PB.199.4 chr1 - 1762 3 novel_not_in_catalog PTAFR novel NA NA NA NA no_subtype FALSE canonical NA NA 84 None 56 3 1 TRUE 0 0 NA B coding 342 1026 123 1148 PB.536.1 chr1 + 2734 3 full-splice_match TMEM167B ENST00000338272.8 3730 3 987 9 no_subtype FALSE canonical NA NA 225 None 45 13 0 FALSE 0 0 NA C coding 27 81 305 385 PB.536.2 chr1 + 2721 1 novel_in_catalog TMEM167B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1755.1 chr2 + 4182 9 novel_not_in_catalog NAB1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1670 None 2 10 0 TRUE 0 0 NA A coding 487 1461 292 1752 PB.2360.1 chr3 - 1627 11 full-splice_match IFT57 ENST00000264538.3 3203 11 108 1468 no_subtype FALSE canonical NA NA 352 None 36 0 0 FALSE 0 0 NA C coding 429 1287 141 1427 PB.2360.2 chr3 - 2783 7 novel_not_in_catalog IFT57 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 266 None 7 15 1 TRUE 0 0 NA C coding 209 627 55 681 PB.1755.2 chr2 + 3631 2 genic_intron novelGene_1358 novel NA NA NA NA no_subtype FALSE canonical NA NA 573 None 2 23 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2703.1 chr4 - 4246 29 novel_not_in_catalog GAK novel NA NA NA NA no_subtype TRUE canonical NA NA 64 None 43 0 0 TRUE 0 0 NA B coding 1223 3669 184 3852 PB.2703.3 chr4 - 6189 28 novel_not_in_catalog GAK novel NA NA NA NA no_subtype TRUE non_canonical NA NA 254 None 2 16 2 TRUE 0 0 NA B coding 820 2460 3336 5795 PB.2703.2 chr4 - 4311 28 novel_not_in_catalog GAK novel NA NA NA NA no_subtype FALSE canonical NA NA 276 None 3 4 0 TRUE 0 0 NA B coding 1262 3786 132 3917 PB.4155.1 chr6 + 1762 1 genic HEBP2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1074.1 chr1 + 1506 5 full-splice_match CNIH4 ENST00000465271.5 4125 5 48 2571 no_subtype FALSE canonical NA NA 419 None 2 4 0 FALSE 0 0 NA A coding 139 417 28 444 PB.6773.1 chr12 + 2101 9 novel_in_catalog RAD51AP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 911 None 2 8 0 FALSE 0 0 NA A coding 265 795 251 1045 PB.7083.1 chr12 + 1628 1 genic_intron novelGene_610 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 5 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.211.10 chr1 - 2096 7 novel_in_catalog LAPTM5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 116 None 26 4 0 FALSE 0 0 NA C coding 192 576 163 738 PB.211.11 chr1 - 1583 1 genic_intron novelGene_297 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3106.2 chr4 - 3399 5 novel_not_in_catalog CTSO novel NA NA NA NA no_subtype FALSE canonical NA NA 1092 None 2 14 0 FALSE 0 0 NA C coding 139 417 1087 1503 PB.211.13 chr1 - 4649 2 novel_not_in_catalog LAPTM5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 301 None 2 18 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.5434.1 chr9 - 2065 2 full-splice_match C9orf152 ENST00000400613.4 2717 2 642 10 no_subtype FALSE canonical NA NA 161 None 3 15 1 FALSE 0 0 NA A coding 218 654 32 685 PB.5165.2 chr8 + 2033 12 full-splice_match GPAA1 ENST00000355091.8 2078 12 42 3 no_subtype FALSE canonical NA NA 1701 None 24 2 0 FALSE 0 0 NA C coding 621 1863 80 1942 PB.5048.9 chr8 - 2980 7 novel_in_catalog YWHAZ novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 70 None 5 10 0 FALSE 0 0 NA C coding 245 735 279 1013 PB.5913.1 chr10 + 2911 20 incomplete-splice_match BTAF1 ENST00000265990.10 7250 38 44 4295 3prime_fragment FALSE canonical NA NA 2691 None 12 1 0 FALSE 0 0 NA A coding 882 2646 265 2910 PB.3896.1 chr6 + 1758 6 novel_in_catalog RNF8 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1271 None 2 4 0 FALSE 0 0 NA A coding 412 1236 144 1379 PB.1129.1 chr1 + 1465 4 full-splice_match GGPS1 ENST00000282841.9 2895 4 3 1427 no_subtype FALSE canonical NA NA 370 None 11 3 0 FALSE 0 0 NA A coding 300 900 230 1129 PB.5182.2 chr8 - 3789 21 full-splice_match RECQL4 ENST00000617875.4 3809 21 17 3 no_subtype FALSE canonical NA NA 109 None 4 7 0 FALSE 0 0 NA C coding 1208 3624 26 3649 PB.5182.1 chr8 - 3796 21 novel_not_in_catalog RECQL4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 96 None 2 13 1 FALSE 0 0 NA C coding 1155 3465 13 3477 PB.3901.1 chr6 - 1969 6 full-splice_match GLO1 ENST00000373365.4 2012 6 14 29 no_subtype FALSE canonical NA NA 157 None 16 10 0 FALSE 0 0 NA A coding 184 552 74 625 PB.3114.1 chr4 - 2759 3 full-splice_match NPY1R ENST00000296533.2 3029 3 265 5 no_subtype FALSE canonical NA NA 116 None 4 8 0 FALSE 0 0 NA A coding 384 1152 268 1419 PB.9388.1 chr17 - 2937 1 genic ST6GALNAC2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 24 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6262.1 chr11 - 1548 3 full-splice_match CD59 ENST00000415002.6 1878 3 243 87 no_subtype FALSE canonical NA NA 89 None 29 8 0 FALSE 0 0 NA A coding 128 384 23 406 PB.10222.1 chr20 + 3150 7 full-splice_match PSMF1 ENST00000335877.10 4290 7 72 1068 no_subtype FALSE canonical NA NA 868 None 66 5 0 FALSE 0 0 NA A coding 271 813 105 917 PB.4237.2 chr6 - 1872 12 full-splice_match TCP1 ENST00000321394.11 2499 12 157 470 no_subtype FALSE canonical NA NA 188 None 51 0 0 FALSE 0 0 NA C coding 556 1668 125 1792 PB.800.10 chr1 - 4250 11 novel_in_catalog ARHGAP30 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 379 None 2 10 0 FALSE 0 0 NA C coding 953 2859 624 3482 PB.4473.5 chr7 + 2784 7 novel_not_in_catalog DTX2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2555 None 4 16 2 TRUE 0 0 NA B coding 319 957 398 1354 PB.10384.1 chr20 + 1831 1 genic_intron novelGene_410 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4129.1 chr6 + 3141 2 novel_not_in_catalog ENPP1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 21 None 2 30 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.4237.1 chr6 - 2752 2 antisense novelGene_ACAT2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1878 None 2 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2029.1 chr3 + 5588 3 genic_intron novelGene_130 novel NA NA NA NA no_subtype TRUE canonical NA NA 278 None 2 47 1 FALSE 0 0 NA A coding 101 303 4348 4650 PB.1632.1 chr2 - 6519 1 novel_in_catalog ZEB2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 22 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4916.1 chr8 - 3536 2 genic_intron novelGene_515 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3417 None 4 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3568.1 chr5 + 3351 1 full-splice_match CARMN ENST00000614517.1 5524 1 2166 7 no_subtype FALSE canonical NA NA NA None 4 24 0 FALSE 0 0 NA C coding 169 507 1431 1937 PB.5096.1 chr8 + 2703 3 genic_intron novelGene_1070 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1765 None 5 14 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.9077.1 chr17 + 1827 10 novel_not_in_catalog AATF novel NA NA NA NA no_subtype FALSE canonical NA NA 1609 None 2 3 1 FALSE 0 0 NA A coding 389 1167 140 1306 PB.6946.2 chr12 - 1656 12 full-splice_match PRKAG1 ENST00000548065.5 2071 12 408 7 no_subtype FALSE canonical NA NA 58 None 15 3 0 FALSE 0 0 NA C coding 331 993 50 1042 PB.9220.1 chr17 + 1396 4 novel_in_catalog NGFR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 694 None 2 5 0 FALSE 0 0 NA C coding 274 822 127 948 PB.9220.2 chr17 + 3420 6 full-splice_match NGFR ENST00000172229.7 3417 6 5 -8 no_subtype FALSE canonical NA NA 1102 None 58 10 0 FALSE 0 0 NA C coding 427 1281 121 1401 PB.1266.3 chr2 + 3556 19 novel_not_in_catalog TTC27 novel NA NA NA NA no_subtype FALSE canonical NA NA 2481 None 2 9 1 FALSE 0 0 NA B coding 470 1410 1192 2601 PB.10254.1 chr20 - 4197 17 novel_in_catalog SLC23A2 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical NA NA 93 None 2 13 1 FALSE 0 0 NA A coding 649 1947 374 2320 PB.5096.2 chr8 + 2711 3 genic_intron novelGene_1070 novel NA NA NA NA no_subtype FALSE canonical NA NA 1796 None 3 17 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.4410.12 chr7 + 2697 1 novel_in_catalog CCM2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 16 8 0 FALSE 0 0 NA C coding 105 315 200 514 PB.5130.2 chr8 + 1993 14 incomplete-splice_match PHF20L1 ENST00000395386.6 6237 21 -1 4245 3prime_fragment FALSE canonical NA NA 1936 None 2 1 0 FALSE 0 0 NA B coding 564 1692 301 1992 PB.4410.10 chr7 + 1442 2 novel_in_catalog CCM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 89 None 2 9 0 FALSE 0 0 NA C coding 113 339 890 1228 PB.8722.1 chr16 + 1722 7 novel_not_in_catalog IL34 novel NA NA NA NA no_subtype FALSE canonical NA NA 1037 None 4 4 0 FALSE 0 0 NA A coding 242 726 500 1225 PB.1941.2 chr2 - 2966 2 antisense novelGene_LRRFIP1_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 2545 None 7 17 1 FALSE 0 0 NA A coding 115 345 302 646 PB.1824.5 chr2 - 5513 2 genic_intron novelGene_1388 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 162 None 2 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6946.1 chr12 - 1557 11 full-splice_match PRKAG1 ENST00000547306.5 1531 11 -26 0 no_subtype FALSE canonical NA NA 59 None 4 9 2 FALSE 0 0 NA C coding 280 840 94 933 PB.9361.1 chr17 - 3024 17 full-splice_match GGA3 ENST00000537686.5 4069 17 209 836 no_subtype FALSE canonical NA NA 48 None 64 8 1 FALSE 0 0 NA A coding 723 2169 9 2177 PB.4493.6 chr7 - 1528 2 novel_in_catalog SRI novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 72 None 10 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8730.3 chr16 - 2976 1 incomplete-splice_match AP1G1 ENST00000299980.8 6969 23 3988 6 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3862.1 chr6 + 1941 1 genic UHRF1BP1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5355.1 chr9 + 1475 8 novel_in_catalog CTSL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1102 None 80 2 0 FALSE 0 0 NA A coding 333 999 201 1199 PB.8730.4 chr16 - 2948 8 novel_not_in_catalog AP1G1 novel NA NA NA NA no_subtype FALSE canonical NA NA 279 None 3 11 1 TRUE 0 0 NA C coding 247 741 1036 1776 PB.9714.1 chr19 + 1986 14 full-splice_match TRIP10 ENST00000313285.12 2035 14 24 25 no_subtype FALSE canonical NA NA 1547 None 7 4 0 FALSE 0 0 NA C coding 545 1635 59 1693 PB.6616.1 chr11 - 1306 9 full-splice_match CASP4 ENST00000444739.6 2158 9 840 12 no_subtype FALSE canonical NA NA 78 None 4 2 0 FALSE 0 0 NA A coding 377 1131 72 1202 PB.5435.1 chr9 + 2832 1 antisense novelGene_LPAR1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.276 chr14 - 1953 8 fusion IGHM,IGHV3-21 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 119 None 2 14 1 TRUE 0 0 NA A coding 486 1458 376 1833 PB.5045.2 chr8 - 2319 15 full-splice_match PABPC1 ENST00000318607.9 3485 15 780 386 no_subtype FALSE canonical NA NA 542 None 1075 3 0 FALSE 0 0 NA C coding 636 1908 350 2257 PB.9981.1 chr19 + 2813 10 novel_in_catalog PAK4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1837 None 12 11 0 FALSE 0 0 NA A coding 591 1773 218 1990 PB.3579.3 chr5 - 1485 9 full-splice_match CD74 ENST00000009530.11 981 9 0 -504 no_subtype FALSE canonical NA NA 127 None 261 8 1 FALSE 0 0 NA C coding 296 888 3 890 PB.11216.1 chrX - 3058 3 genic_intron novelGene_1257 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 886 None 2 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8665.1 chr16 + 2709 6 novel_not_in_catalog CBFB novel NA NA NA NA no_subtype FALSE canonical NA NA 365 None 2 11 0 TRUE 0 0 NA A coding 87 261 171 431 PB.2002.1 chr3 + 2748 2 genic_intron novelGene_92 novel NA NA NA NA no_subtype TRUE canonical NA NA 1612 None 2 25 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.11023.4 chrX + 2581 11 full-splice_match NONO ENST00000373841.5 2606 11 20 5 no_subtype FALSE canonical NA NA 1359 None 3 8 0 FALSE 0 0 NA C coding 471 1413 79 1491 PB.2641.1 chr3 - 3189 12 novel_not_in_catalog LIPH novel NA NA NA NA no_subtype TRUE canonical NA NA 184 None 5 19 1 TRUE 0 0 NA A coding 323 969 520 1488 PB.6833.2 chr12 + 1540 6 full-splice_match BCL2L14 ENST00000396367.5 1886 6 21 325 no_subtype FALSE canonical NA NA 1119 None 2 1 0 FALSE 0 0 NA C coding 327 981 175 1155 PB.6833.1 chr12 + 1532 6 full-splice_match BCL2L14 ENST00000308721.9 1897 6 39 326 no_subtype FALSE canonical NA NA 1112 None 8 1 0 FALSE 0 0 NA C coding 327 981 168 1148 PB.1118.2 chr1 + 3749 7 novel_not_in_catalog TSNAX novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1499 None 2 25 1 TRUE 0 0 NA C coding 168 504 142 645 PB.3579.6 chr5 - 2854 8 novel_in_catalog CD74 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 126 None 2 15 1 FALSE 0 0 NA C coding 279 837 2 838 PB.5974.5 chr10 + 4441 15 novel_in_catalog SEMA4G novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2133 None 5 6 0 FALSE 0 0 NA B coding 838 2514 444 2957 PB.707.14 chr1 - 6449 15 novel_not_in_catalog ADAR novel NA NA NA NA no_subtype FALSE non_canonical NA NA 92 None 2 23 0 TRUE 0 0 NA B coding 664 1992 1746 3737 PB.9886.1 chr19 + 1323 5 full-splice_match KXD1 ENST00000222307.8 1426 5 91 12 no_subtype FALSE canonical NA NA 358 None 10 8 1 FALSE 0 0 NA A coding 176 528 58 585 PB.3880.2 chr6 - 3723 12 novel_not_in_catalog C6orf222 novel NA NA NA NA no_subtype FALSE canonical NA NA 171 None 2 9 1 FALSE 0 0 NA B coding 651 1953 176 2128 PB.3880.3 chr6 - 3593 13 novel_not_in_catalog C6orf222 novel NA NA NA NA no_subtype FALSE canonical NA NA 38 None 2 10 1 TRUE 0 0 NA B coding 652 1956 43 1998 PB.3880.1 chr6 - 3734 13 novel_not_in_catalog C6orf222 novel NA NA NA NA no_subtype FALSE canonical NA NA 178 None 10 9 1 TRUE 0 0 NA B coding 652 1956 183 2138 PB.959.2 chr1 + 1444 1 novel_in_catalog TIMM17A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4833.4 chr8 + 1523 9 novel_in_catalog CHMP7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1174 None 4 5 0 FALSE 0 0 NA B coding 489 1467 55 1521 PB.4833.1 chr8 + 3370 11 novel_not_in_catalog CHMP7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1916 None 9 14 0 FALSE 0 0 NA B coding 453 1359 617 1975 PB.2285.1 chr3 - 3800 12 incomplete-splice_match LRIG1 ENST00000273261.7 5273 19 1471 2 5prime_fragment FALSE canonical NA NA 133 None 2 19 0 FALSE 0 0 NA A coding 665 1995 339 2333 PB.4833.2 chr8 + 3380 11 novel_not_in_catalog CHMP7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1926 None 2 14 1 TRUE 0 0 NA B coding 453 1359 627 1985 PB.1040.2 chr1 + 1567 4 incomplete-splice_match PPP2R5A ENST00000261461.6 3128 13 1555 6 internal_fragment FALSE canonical NA NA 347 None 2 2 0 FALSE 0 0 NA A coding 159 477 1 477 PB.3532.3 chr5 + 1670 2 novel_in_catalog TMCO6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 144 None 2 10 1 FALSE 0 0 NA C coding 119 357 60 416 PB.10200.2 chr19 + 2827 1 novel_in_catalog ZNF274 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA C coding 268 804 1615 2418 PB.10200.1 chr19 + 2449 8 full-splice_match ZNF274 ENST00000617501.4 2538 8 107 -18 no_subtype FALSE canonical NA NA 1050 None 5 3 0 FALSE 0 0 NA C coding 653 1959 72 2030 PB.2015.5 chr3 + 4214 17 novel_in_catalog FBLN2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3380 None 2 6 0 FALSE 0 0 NA C coding 1231 3693 43 3735 PB.2015.4 chr3 + 4078 16 novel_not_in_catalog FBLN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3288 None 4 12 1 TRUE 0 0 NA C coding 767 2301 43 2343 PB.2015.3 chr3 + 4180 20 novel_not_in_catalog FBLN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3342 None 3 20 4 TRUE 0 0 NA C coding 725 2175 96 2270 PB.2015.2 chr3 + 4131 17 full-splice_match FBLN2 ENST00000295760.11 4127 17 -27 23 no_subtype FALSE canonical NA NA 3293 None 27 6 0 FALSE 0 0 NA C coding 1184 3552 97 3648 PB.2015.1 chr3 + 3906 18 full-splice_match FBLN2 ENST00000404922.7 4318 18 24 388 no_subtype FALSE canonical NA NA 3433 None 31 2 0 FALSE 0 0 NA C coding 1231 3693 96 3788 PB.589.3 chr1 - 1675 1 novel_in_catalog BCAS2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 9 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2729.3 chr4 - 2525 14 novel_not_in_catalog JAKMIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 284 None 3 4 0 TRUE 0 0 NA A coding 626 1878 432 2309 PB.4027.1 chr6 + 2093 1 genic_intron novelGene_806 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3700.4 chr5 - 3119 4 novel_not_in_catalog MGAT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 158 None 25 9 1 TRUE 0 0 NA B coding 445 1335 714 2048 PB.490.1 chr1 + 1418 12 incomplete-splice_match MTF2 ENST00000370298.8 4125 15 45 2662 3prime_fragment FALSE canonical NA NA 1404 None 8 0 0 FALSE 0 0 NA C coding 391 1173 245 1417 PB.9824.10 chr19 + 2824 18 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2198 None 15 6 0 TRUE 0 0 NA C coding 715 2145 81 2225 PB.490.2 chr1 + 3229 15 full-splice_match MTF2 ENST00000370298.8 4125 15 54 842 no_subtype FALSE canonical NA NA 1659 None 6 9 0 FALSE 0 0 NA C coding 593 1779 236 2014 PB.490.4 chr1 + 3246 1 novel_in_catalog MTF2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 27 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6484.1 chr11 - 893 4 full-splice_match CDK2AP2 ENST00000301488.7 1378 4 469 16 no_subtype FALSE canonical NA NA 162 None 17 4 0 FALSE 0 0 NA C coding 126 378 81 458 PB.6484.2 chr11 - 1569 2 full-splice_match CDK2AP2 ENST00000526447.1 772 2 -86 -711 no_subtype FALSE canonical NA NA 571 None 2 4 0 FALSE 0 0 NA C coding 115 345 365 709 PB.1553.1 chr2 + 1621 6 novel_not_in_catalog IL1RN novel NA NA NA NA no_subtype FALSE canonical NA NA 1491 None 8 9 0 TRUE 0 0 NA B coding 143 429 62 490 PB.125.1 chr1 + 1003 3 full-splice_match C1QB ENST00000314933.6 1044 3 33 8 no_subtype FALSE canonical NA NA 286 None 18 1 0 FALSE 0 0 NA A coding 253 759 100 858 PB.1811.1 chr2 + 3477 4 novel_not_in_catalog CTLA4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2898 None 2 11 1 TRUE 0 0 NA A coding 177 531 77 607 PB.4495.1 chr7 - 2631 3 antisense novelGene_STEAP2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 750 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9824.13 chr19 + 2975 19 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2349 None 2 6 0 TRUE 0 0 NA C coding 761 2283 94 2376 PB.5974.7 chr10 + 4064 16 novel_not_in_catalog SEMA4G novel NA NA NA NA no_subtype FALSE canonical NA NA 1757 None 4 4 0 FALSE 0 0 NA B coding 839 2517 65 2581 PB.4256.1 chr6 + 2064 18 full-splice_match ERMARD ENST00000366773.7 2141 18 0 77 no_subtype FALSE canonical NA NA 1886 None 3 0 0 FALSE 0 0 NA A coding 677 2031 34 2064 PB.7078.2 chr12 - 2955 2 genic RP11-196H14.3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 27 None 7 18 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.4375.1 chr7 + 3536 1 genic_intron novelGene_363 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6823.1 chr12 - 1777 6 novel_not_in_catalog CLEC1A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 228 None 3 4 1 TRUE 0 0 NA A coding 271 813 114 926 PB.5365.2 chr9 - 2747 20 novel_in_catalog IARS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 123 None 4 6 0 FALSE 0 0 NA B coding 735 2205 131 2335 PB.3677.7 chr5 - 3171 3 novel_not_in_catalog DOK3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 45 None 2 27 2 TRUE 0 0 NA B coding 175 525 679 1203 PB.7299.2 chr12 + 2383 7 full-splice_match PRKAB1 ENST00000229328.9 2610 7 218 9 no_subtype FALSE canonical NA NA 1009 None 9 7 0 FALSE 0 0 NA C coding 270 810 275 1084 PB.8484.1 chr16 + 1343 4 full-splice_match LYRM1 ENST00000567954.5 460 4 2 -885 no_subtype FALSE canonical NA NA 341 None 3 9 0 FALSE 0 0 NA A coding 122 366 90 455 PB.7299.1 chr12 + 2620 6 novel_in_catalog PRKAB1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 943 None 4 8 0 FALSE 0 0 NA C coding 252 756 278 1033 PB.3031.1 chr4 + 2930 4 novel_not_in_catalog KIAA1109 novel NA NA NA NA no_subtype FALSE canonical NA NA 2824 None 2 26 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.10515.2 chr21 - 3473 19 incomplete-splice_match LTN1 ENST00000361371.9 7685 30 8 4204 internal_fragment FALSE canonical NA NA 114 None 2 4 0 FALSE 0 0 NA C coding 1133 3399 73 3471 PB.10515.3 chr21 - 1662 10 incomplete-splice_match LTN1 ENST00000389195.6 2714 13 72 980 internal_fragment FALSE canonical NA NA 114 None 12 0 0 FALSE 0 0 NA C coding 530 1590 73 1662 PB.6278.1 chr11 - 2997 1 genic_intron novelGene_353 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A coding 100 300 357 656 PB.10515.1 chr21 - 7660 30 full-splice_match LTN1 ENST00000361371.9 7685 30 22 3 no_subtype FALSE canonical NA NA 100 None 3 15 0 FALSE 0 0 NA C coding 1766 5298 59 5356 PB.9699.1 chr19 - 2836 5 novel_not_in_catalog C19orf70 novel NA NA NA NA no_subtype FALSE canonical NA NA 68 None 3 17 0 TRUE 0 0 NA A coding 118 354 40 393 PB.6064.1 chr10 + 1515 8 novel_in_catalog HTRA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 804 None 3 0 0 FALSE 0 0 NA A coding 167 501 470 970 PB.9240.1 chr17 - 3565 23 incomplete-splice_match SPAG9 ENST00000357122.8 4761 29 1178 18 5prime_fragment FALSE canonical NA NA 80 None 3 3 0 FALSE 0 0 NA A coding 969 2907 46 2952 PB.2830.1 chr4 + 701 1 full-splice_match RP11-100N21.1 ENST00000487352.1 616 1 -36 -49 no_subtype FALSE canonical NA NA NA None 7 1 0 FALSE 0 0 NA A coding 122 366 37 402 PB.6800.1 chr12 - 2229 11 full-splice_match C1R ENST00000542285.5 2660 11 145 286 no_subtype FALSE canonical NA NA 76 None 43 0 0 FALSE 0 0 NA A coding 705 2115 75 2189 PB.5925.3 chr10 + 3382 1 novel_in_catalog FFAR4 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 25 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2921.1 chr4 - 1705 12 full-splice_match HPSE ENST00000311412.9 4615 12 46 2864 no_subtype FALSE canonical NA NA 281 None 10 2 0 FALSE 0 0 NA A coding 543 1629 55 1683 PB.9218.1 chr17 - 1861 2 novel_not_in_catalog ZNF652 novel NA NA NA NA no_subtype TRUE canonical NA NA 749 None 6 8 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.143.2 chr1 - 1813 5 full-splice_match SRSF10 ENST00000484146.6 1089 5 -2 -722 no_subtype FALSE canonical NA NA 168 None 7 7 1 FALSE 0 0 NA C coding 165 495 104 598 PB.4493.5 chr7 - 1502 8 novel_not_in_catalog SRI novel NA NA NA NA no_subtype FALSE non_canonical NA NA 69 None 2 3 1 TRUE 0 0 NA C coding 106 318 286 603 PB.10168.3 chr19 + 3480 10 novel_not_in_catalog LILRA2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3302 None 2 16 1 TRUE 0 0 NA A coding 427 1281 38 1318 PB.10168.1 chr19 + 2812 10 novel_not_in_catalog LILRA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1423 None 3 11 2 TRUE 0 0 NA A coding 315 945 78 1022 PB.5612.3 chr9 + 1598 1 incomplete-splice_match RXRA ENST00000356384.4 5770 12 3676 497 no_subtype FALSE canonical NA NA NA None 10 10 0 FALSE 0 0 NA B coding 163 489 146 634 PB.5612.2 chr9 + 5916 3 novel_not_in_catalog RXRA novel NA NA NA NA no_subtype FALSE canonical NA NA 2295 None 2 45 0 TRUE 0 0 NA B coding 134 402 1061 1462 PB.5612.1 chr9 + 8678 3 novel_not_in_catalog RXRA novel NA NA NA NA no_subtype TRUE canonical NA NA 3902 None 2 71 1 TRUE 0 0 NA B coding 134 402 1577 1978 PB.10509.1 chr21 + 3847 10 full-splice_match JAM2 ENST00000480456.5 4337 10 480 10 no_subtype FALSE canonical NA NA 934 None 2 16 0 FALSE 0 0 NA A coding 298 894 71 964 PB.7712.1 chr14 + 3802 2 antisense novelGene_CNIH1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1233 None 2 25 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6942.1 chr12 - 3245 17 full-splice_match DDX23 ENST00000308025.7 3248 17 -2 5 no_subtype FALSE canonical NA NA 82 None 145 1 0 FALSE 0 0 NA C coding 820 2460 83 2542 PB.5818.3 chr10 - 3081 10 novel_not_in_catalog AIFM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 42 None 3 10 0 FALSE 0 0 NA C coding 373 1119 59 1177 PB.5818.2 chr10 - 3502 11 novel_not_in_catalog AIFM2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 402 None 4 12 1 TRUE 0 0 NA C coding 373 1119 480 1598 PB.5818.1 chr10 - 1363 9 full-splice_match AIFM2 ENST00000307864.2 3243 9 160 1720 no_subtype FALSE canonical NA NA 41 None 7 1 0 FALSE 0 0 NA C coding 373 1119 55 1173 PB.2083.2 chr3 + 2467 19 full-splice_match CNOT10 ENST00000328834.9 2815 19 190 158 no_subtype FALSE canonical NA NA 2206 None 12 4 0 FALSE 0 0 NA C coding 744 2232 127 2358 PB.1300.1 chr2 - 1247 10 full-splice_match HAAO ENST00000294973.10 1265 10 9 9 no_subtype FALSE canonical NA NA 127 None 2 2 0 FALSE 0 0 NA A coding 286 858 48 905 PB.2083.1 chr3 + 3010 22 novel_not_in_catalog CNOT10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2741 None 2 6 2 TRUE 0 0 NA C coding 744 2232 276 2507 PB.9167.4 chr17 - 2950 20 novel_not_in_catalog SLC4A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 73 None 2 4 0 TRUE 0 0 NA B coding 906 2718 142 2859 PB.9504.1 chr18 - 3033 11 novel_not_in_catalog ESCO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1005 None 2 3 0 TRUE 0 0 NA A coding 590 1770 226 1995 PB.10912.10 chrX + 1765 1 genic CYBB novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2806.1 chr4 - 1824 8 novel_not_in_catalog TMEM156 novel NA NA NA NA no_subtype FALSE canonical NA NA 184 None 8 6 0 TRUE 0 0 NA B coding 296 888 97 984 PB.10587.2 chr21 + 913 1 incomplete-splice_match RRP1B ENST00000470886.1 4634 5 3719 3 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4159.1 chr6 + 2809 1 genic_intron novelGene_1175 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2420.4 chr3 + 2749 8 novel_not_in_catalog CD86 novel NA NA NA NA no_subtype FALSE canonical NA NA 1049 None 5 13 0 TRUE 0 0 NA B coding 323 969 175 1143 PB.4959.2 chr8 - 3423 1 genic CPA6 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 27 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2420.2 chr3 + 2676 8 novel_not_in_catalog CD86 novel NA NA NA NA no_subtype FALSE canonical NA NA 980 None 3 12 0 TRUE 0 0 NA B coding 323 969 106 1074 PB.7900.1 chr14 + 1421 13 full-splice_match VRK1 ENST00000216639.7 1745 13 88 236 no_subtype FALSE canonical NA NA 1220 None 11 3 0 FALSE 0 0 NA A coding 396 1188 62 1249 PB.6703.26 chr11 + 1454 1 genic_intron novelGene_1061 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4759.2 chr7 - 3319 1 genic_intron novelGene_1244 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5534.2 chr9 + 1598 1 incomplete-splice_match SLC25A25 ENST00000373069.9 3376 11 1774 5 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C coding 103 309 292 600 PB.7312.8 chr12 + 2608 17 novel_not_in_catalog RNF10 novel NA NA NA NA no_subtype FALSE canonical NA NA 2319 None 7 2 0 TRUE 0 0 NA C coding 700 2100 62 2161 PB.7312.9 chr12 + 3133 17 full-splice_match RNF10 ENST00000325954.8 3825 17 5 687 no_subtype FALSE canonical NA NA 2815 None 77 5 0 FALSE 0 0 NA C coding 811 2433 457 2889 PB.7312.4 chr12 + 2814 17 novel_not_in_catalog RNF10 novel NA NA NA NA no_subtype FALSE canonical NA NA 2656 None 12 3 0 TRUE 0 0 NA C coding 786 2358 457 2814 PB.3158.1 chr5 + 2283 15 full-splice_match SDHA ENST00000264932.10 2390 15 83 24 no_subtype FALSE canonical NA NA 1940 None 18 0 0 FALSE 0 0 NA A coding 664 1992 33 2024 PB.7312.7 chr12 + 3040 18 novel_not_in_catalog RNF10 novel NA NA NA NA no_subtype FALSE canonical NA NA 2747 None 7 7 1 TRUE 0 0 NA C coding 711 2133 457 2589 PB.8327.1 chr15 + 2772 6 full-splice_match ASB7 ENST00000332783.11 4985 6 29 2184 no_subtype FALSE canonical NA NA 1573 None 5 14 0 FALSE 0 0 NA A coding 318 954 757 1710 PB.7772.4 chr14 - 1368 5 novel_in_catalog VTI1B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 258 None 2 5 0 FALSE 0 0 NA A coding 201 603 144 746 PB.7312.2 chr12 + 2884 19 novel_not_in_catalog RNF10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2593 None 2 5 0 TRUE 0 0 NA C coding 811 2433 235 2667 PB.5349.1 chr9 - 4573 28 novel_not_in_catalog AGTPBP1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 181 None 2 13 3 TRUE 0 0 NA A coding 1202 3606 215 3820 PB.5234.3 chr9 - 1541 10 novel_not_in_catalog PLIN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 72 None 4 2 1 TRUE 0 0 NA C coding 445 1335 95 1429 PB.5234.2 chr9 - 1601 10 novel_not_in_catalog PLIN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 100 None 2 2 1 TRUE 0 0 NA C coding 445 1335 123 1457 PB.5234.1 chr9 - 1734 11 novel_not_in_catalog PLIN2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 74 None 3 3 1 TRUE 0 0 NA C coding 445 1335 97 1431 PB.8764.1 chr16 + 3354 2 genic RP11-391L3.1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1468 None 7 20 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.3378.1 chr5 - 1292 1 full-splice_match NPM1P27 ENST00000502784.2 830 1 -145 -317 no_subtype FALSE canonical NA NA NA None 8 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5234.4 chr9 - 1950 8 full-splice_match PLIN2 ENST00000276914.6 1972 8 16 6 no_subtype FALSE canonical NA NA 142 None 10 8 0 FALSE 0 0 NA C coding 437 1311 165 1475 PB.10501.1 chr21 + 5481 27 novel_not_in_catalog ABCC13 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3734 None 2 21 0 FALSE 0 0 NA A coding 714 2142 1168 3309 PB.7772.2 chr14 - 1664 9 novel_not_in_catalog RDH11 novel NA NA NA NA no_subtype TRUE canonical NA NA 99 None 2 5 0 TRUE 0 0 NA A coding 318 954 26 979 PB.8132.1 chr15 + 2518 2 novel_in_catalog APH1B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 129 None 2 12 0 FALSE 0 0 NA C coding 146 438 633 1070 PB.4602.6 chr7 - 2795 20 novel_in_catalog SLC26A3 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 110 None 5 8 0 FALSE 0 0 NA C coding 738 2214 199 2412 PB.8132.2 chr15 + 4128 6 full-splice_match APH1B ENST00000261879.9 4189 6 56 5 no_subtype FALSE canonical NA NA 620 None 3 11 0 FALSE 0 0 NA C coding 257 771 15 785 PB.4274.1 chr7 - 3745 4 full-splice_match GNA12 ENST00000275364.7 4378 4 379 254 no_subtype FALSE canonical NA NA 93 None 2 28 0 FALSE 0 0 NA C coding 305 915 13 927 PB.4274.2 chr7 - 2814 1 incomplete-splice_match GNA12 ENST00000491117.5 3375 3 555 7 no_subtype FALSE canonical NA NA NA None 4 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.11024.3 chrX + 5626 34 novel_not_in_catalog TAF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 4750 None 3 4 0 FALSE 0 0 NA C coding 841 2523 2448 4970 PB.1824.2 chr2 - 2994 4 full-splice_match KLF7 ENST00000309446.10 8362 4 401 4967 no_subtype FALSE canonical NA NA 78 None 18 17 1 FALSE 0 0 NA C coding 5 15 868 882 PB.3164.1 chr5 - 5435 3 novel_not_in_catalog LPCAT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 538 None 9 47 0 TRUE 0 0 NA C coding 108 324 2898 3221 PB.5347.1 chr9 + 2650 13 full-splice_match NTRK2 ENST00000395882.5 7111 13 56 4405 no_subtype TRUE canonical NA NA 1890 None 9 7 0 FALSE 0 0 NA C coding 466 1398 528 1925 PB.9995.1 chr19 - 3418 6 novel_not_in_catalog ZNF780A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 63 None 2 7 1 FALSE 0 0 NA A coding 641 1923 178 2100 PB.1824.4 chr2 - 3444 2 novel_not_in_catalog KLF7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2390 None 3 15 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.4223.1 chr6 + 2907 2 novel_not_in_catalog TULP4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 791 None 18 18 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.9732.1 chr19 - 1430 6 novel_not_in_catalog CD320 novel NA NA NA NA no_subtype TRUE canonical NA NA 441 None 5 3 1 TRUE 0 0 NA A coding 353 1059 300 1358 PB.7364.1 chr12 + 3205 20 novel_not_in_catalog AACS novel NA NA NA NA no_subtype TRUE canonical NA NA 1977 None 52 11 1 TRUE 0 0 NA A coding 672 2016 97 2112 PB.4376.15 chr7 - 3538 7 genic_intron novelGene_360 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 534 None 2 22 4 FALSE 0 0 NA A coding 133 399 73 471 PB.6663.2 chr11 - 3956 6 full-splice_match MPZL3 ENST00000278949.8 3968 6 3 9 no_subtype FALSE canonical NA NA 126 None 9 23 0 FALSE 0 0 NA C coding 235 705 54 758 PB.9143.2 chr17 + 4186 19 full-splice_match WNK4 ENST00000246914.9 4001 19 -60 -125 no_subtype FALSE canonical NA NA 3810 None 3 4 0 FALSE 0 0 NA C coding 1243 3729 82 3810 PB.9143.3 chr17 + 3416 11 novel_in_catalog WNK4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2094 None 2 5 0 FALSE 0 0 NA C coding 738 2214 55 2268 PB.3816.1 chr6 + 907 7 full-splice_match CSNK2B ENST00000375882.6 948 7 37 4 no_subtype FALSE canonical NA NA 676 None 3 3 0 FALSE 0 0 NA A coding 215 645 120 764 PB.9143.1 chr17 + 3550 17 novel_not_in_catalog WNK4 novel NA NA NA NA no_subtype FALSE canonical NA NA 3517 None 2 1 0 FALSE 0 0 NA C coding 1153 3459 90 3548 PB.9347.1 chr17 - 5673 5 novel_not_in_catalog CD300C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 152 None 5 38 2 TRUE 0 0 NA B coding 191 573 158 730 PB.7486.1 chr13 + 1949 1 incomplete-splice_match FNDC3A ENST00000398316.7 5714 24 3762 4 no_subtype FALSE canonical NA NA NA None 12 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7954.2 chr14 - 2798 3 full-splice_match GPR132 ENST00000392585.2 2887 3 52 37 no_subtype FALSE canonical NA NA 15 None 22 11 0 FALSE 0 0 NA A coding 371 1113 123 1235 PB.1068.1 chr1 - 3160 6 novel_not_in_catalog TLR5 novel NA NA NA NA no_subtype FALSE canonical NA NA 53 None 2 4 1 TRUE 0 0 NA A coding 858 2574 441 3014 PB.10075.1 chr19 + 6343 6 full-splice_match ARHGAP35 ENST00000404338.7 8889 6 1960 586 no_subtype FALSE canonical NA NA 2182 None 2 34 0 FALSE 0 0 NA A coding 631 1893 645 2537 PB.3370.9 chr5 - 5929 8 novel_not_in_catalog MEF2C novel NA NA NA NA no_subtype TRUE canonical NA NA 443 None 3 22 1 TRUE 0 0 NA B coding 200 600 583 1182 PB.3370.4 chr5 - 2730 10 novel_in_catalog MEF2C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 228 None 25 6 0 FALSE 0 0 NA B coding 465 1395 368 1762 PB.9347.3 chr17 - 1402 4 novel_not_in_catalog CD300C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 380 None 4 2 1 TRUE 0 0 NA B coding 219 657 323 979 PB.252.1 chr1 + 3412 8 full-splice_match NCDN ENST00000356090.8 3433 8 11 10 no_subtype FALSE canonical NA NA 1869 None 23 6 0 FALSE 0 0 NA C coding 712 2136 168 2303 PB.3370.1 chr5 - 3469 10 novel_in_catalog MEF2C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 272 None 16 5 0 FALSE 0 0 NA B coding 433 1299 415 1713 PB.252.3 chr1 + 4149 7 novel_in_catalog NCDN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2605 None 2 12 0 FALSE 0 0 NA C coding 712 2136 904 3039 PB.252.2 chr1 + 3590 8 novel_not_in_catalog NCDN novel NA NA NA NA no_subtype FALSE canonical NA NA 2046 None 2 12 1 FALSE 0 0 NA C coding 712 2136 345 2480 PB.3515.2 chr5 - 2973 8 full-splice_match DNAJC18 ENST00000302060.9 5103 8 25 2105 no_subtype FALSE canonical NA NA 96 None 18 11 0 FALSE 0 0 NA C coding 358 1074 57 1130 PB.8542.2 chr16 + 1730 7 novel_not_in_catalog MVP novel NA NA NA NA no_subtype TRUE canonical NA NA 707 None 3 6 0 TRUE 0 0 NA B coding 320 960 36 995 PB.8542.3 chr16 + 2699 12 novel_not_in_catalog MVP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1909 None 3 6 1 TRUE 0 0 NA B coding 545 1635 36 1670 PB.8343.1 chr16 - 2788 3 genic_intron novelGene_6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1691 None 2 17 1 FALSE 0 0 NA A coding 115 345 648 992 PB.860.1 chr1 - 2826 20 full-splice_match KIFAP3 ENST00000361580.6 2957 20 111 20 no_subtype FALSE canonical NA NA 149 None 21 2 0 FALSE 0 0 NA C coding 792 2376 118 2493 PB.860.2 chr1 - 2970 21 novel_not_in_catalog KIFAP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 215 None 4 7 2 FALSE 0 0 NA C coding 772 2316 184 2499 PB.3183.1 chr5 + 1918 8 full-splice_match FAM105A ENST00000274217.3 3597 8 53 1626 no_subtype FALSE canonical NA NA 964 None 28 6 0 FALSE 0 0 NA A coding 356 1068 68 1135 PB.10682.1 chr22 - 1846 15 novel_not_in_catalog CHEK2 novel NA NA NA NA no_subtype TRUE canonical NA NA 70 None 3 4 0 FALSE 0 0 NA A coding 539 1617 77 1693 PB.4335.1 chr7 - 1676 12 novel_in_catalog HNRNPA2B1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 170 None 6 2 0 FALSE 0 0 NA C coding 341 1023 165 1187 PB.4335.2 chr7 - 1543 11 novel_in_catalog HNRNPA2B1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 175 None 4 2 0 FALSE 0 0 NA C coding 341 1023 170 1192 PB.4335.3 chr7 - 1621 12 novel_not_in_catalog HNRNPA2B1 novel NA NA NA NA no_subtype FALSE canonical NA NA 175 None 2 2 0 FALSE 0 0 NA C coding 341 1023 170 1192 PB.4335.4 chr7 - 2859 11 novel_in_catalog HNRNPA2B1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 172 None 29 5 0 FALSE 0 0 NA C coding 341 1023 167 1189 PB.4335.5 chr7 - 1709 11 full-splice_match HNRNPA2B1 ENST00000356674.7 1711 11 -8 10 no_subtype FALSE canonical NA NA 183 None 215 3 1 FALSE 0 0 NA C coding 341 1023 178 1200 PB.3346.2 chr5 - 2867 2 antisense novelGene_PAPD4_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1630 None 2 39 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.3346.1 chr5 - 2887 3 antisense novelGene_PAPD4_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1605 None 2 32 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.224.1 chr1 - 2677 2 antisense novelGene_KPNA6_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 339 None 7 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7962.2 chr15 + 2528 8 full-splice_match NIPA2 ENST00000337451.7 3233 8 35 670 no_subtype FALSE canonical NA NA 1026 None 10 14 0 FALSE 0 0 NA C coding 360 1080 579 1658 PB.7962.1 chr15 + 2011 7 novel_in_catalog NIPA2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 918 None 2 6 0 FALSE 0 0 NA C coding 360 1080 471 1550 PB.119.1 chr1 + 2083 6 novel_in_catalog CDC42 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 569 None 20 12 0 FALSE 0 0 NA B coding 191 573 84 656 PB.7471.20 chr13 - 1844 3 novel_in_catalog LCP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 98 None 2 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.119.3 chr1 + 2050 5 novel_in_catalog CDC42 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 538 None 15 11 0 FALSE 0 0 NA B coding 191 573 53 625 PB.119.2 chr1 + 2751 2 novel_in_catalog CDC42 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 34 None 2 21 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.119.5 chr1 + 1432 1 incomplete-splice_match CDC42 ENST00000344548.7 2256 7 819 6 no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.119.4 chr1 + 2737 2 novel_not_in_catalog CDC42 novel NA NA NA NA no_subtype FALSE canonical NA NA 440 None 6 14 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.3923.1 chr6 - 1365 2 novel_not_in_catalog TBCC novel NA NA NA NA no_subtype FALSE canonical NA NA 1225 None 28 1 0 FALSE 0 0 NA A coding 346 1038 18 1055 PB.8685.1 chr16 + 3484 3 full-splice_match PSKH1 ENST00000291041.5 3481 3 -9 6 no_subtype FALSE canonical NA NA 1136 None 42 8 0 FALSE 0 0 NA A coding 424 1272 180 1451 PB.7330.1 chr12 - 3537 12 novel_in_catalog KDM2B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 165 None 6 4 0 FALSE 0 0 NA A coding 776 2328 112 2439 PB.6880.1 chr12 + 3928 13 novel_in_catalog STK38L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1281 None 10 9 0 FALSE 0 0 NA B coding 462 1386 21 1406 PB.2957.1 chr4 + 4205 8 novel_not_in_catalog MMRN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3353 None 14 6 1 FALSE 0 0 NA A coding 1047 3141 82 3222 PB.6880.3 chr12 + 4077 16 novel_not_in_catalog STK38L novel NA NA NA NA no_subtype FALSE canonical NA NA 1430 None 3 12 1 TRUE 0 0 NA B coding 462 1386 170 1555 PB.6880.2 chr12 + 4229 15 novel_not_in_catalog STK38L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1472 None 4 9 0 FALSE 0 0 NA B coding 462 1386 212 1597 PB.10563.1 chr21 + 1540 3 novel_not_in_catalog KCNJ15 novel NA NA NA NA no_subtype FALSE canonical NA NA 143 None 3 0 0 FALSE 0 0 NA A coding 375 1125 162 1286 PB.7070.2 chr12 + 3161 21 full-splice_match USP15 ENST00000353364.7 14950 21 56 11733 no_subtype FALSE canonical NA NA 2697 None 27 0 0 FALSE 0 0 NA C coding 952 2856 22 2877 PB.7070.1 chr12 + 3220 22 full-splice_match USP15 ENST00000280377.9 4748 22 52 1476 no_subtype FALSE canonical NA NA 2769 None 53 2 0 FALSE 0 0 NA C coding 981 2943 7 2949 PB.7070.5 chr12 + 3190 23 novel_not_in_catalog USP15 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2725 None 6 3 1 TRUE 0 0 NA C coding 966 2898 8 2905 PB.7070.4 chr12 + 2467 3 full-splice_match USP15 ENST00000551206.5 1022 3 -3 -1442 no_subtype FALSE canonical NA NA 228 None 2 16 0 FALSE 0 0 NA C coding 122 366 12 377 PB.11087.2 chrX - 2785 6 novel_not_in_catalog ARMCX2 novel NA NA NA NA no_subtype FALSE canonical NA NA 20 None 4 3 2 FALSE 0 0 NA B coding 632 1896 487 2382 PB.3740.1 chr6 + 3466 1 incomplete-splice_match TMEM170B ENST00000379426.1 8362 3 4887 10 no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10487.2 chr20 + 2768 7 novel_not_in_catalog ZGPAT novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2409 None 14 12 1 TRUE 0 0 NA C coding 318 954 109 1062 PB.10281.1 chr20 - 1882 2 antisense novelGene_SNRPB2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 37 None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10416.1 chr20 + 1834 15 full-splice_match CTSA ENST00000372484.7 2149 15 311 4 no_subtype FALSE canonical NA NA 1384 None 229 4 0 FALSE 0 0 NA C coding 480 1440 26 1465 PB.10416.3 chr20 + 1858 15 full-splice_match CTSA ENST00000191018.9 1898 15 35 5 no_subtype FALSE canonical NA NA 1409 None 4 3 0 FALSE 0 0 NA C coding 480 1440 51 1490 PB.9972.4 chr19 + 4522 1 genic_intron novelGene_380 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 42 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2198.3 chr3 + 2791 2 antisense novelGene_GMPPB_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 522 None 2 6 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3946.3 chr6 + 1128 7 incomplete-splice_match HSP90AB1 ENST00000371646.9 2572 12 14 1430 3prime_fragment FALSE canonical NA NA 1052 None 4 3 0 FALSE 0 0 NA C coding 344 1032 96 1127 PB.2198.1 chr3 + 4254 40 novel_not_in_catalog RNF123 novel NA NA NA NA no_subtype TRUE canonical NA NA 3914 None 17 6 1 TRUE 0 0 NA A coding 1314 3942 91 4032 PB.1926.4 chr2 + 3499 17 novel_not_in_catalog ATG16L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2091 None 2 10 0 TRUE 0 0 NA B coding 451 1353 146 1498 PB.10300.2 chr20 - 3854 11 novel_not_in_catalog NAPB novel NA NA NA NA no_subtype FALSE canonical NA NA 137 None 2 22 1 FALSE 0 0 NA C coding 185 555 456 1010 PB.6593.1 chr11 + 1822 3 full-splice_match ANKRD49 ENST00000544612.5 2268 3 358 88 no_subtype FALSE canonical NA NA 397 None 3 6 0 FALSE 0 0 NA C coding 239 717 140 856 PB.10652.1 chr22 + 4271 21 full-splice_match LZTR1 ENST00000215739.12 4572 21 291 10 no_subtype FALSE canonical NA NA 2474 None 19 21 0 FALSE 0 0 NA A coding 840 2520 69 2588 PB.5557.1 chr9 - 1914 11 full-splice_match SH3GLB2 ENST00000372564.7 2982 11 63 1005 no_subtype FALSE canonical NA NA 146 None 3 4 0 FALSE 0 0 NA A coding 395 1185 84 1268 PB.593.1 chr1 + 3453 1 antisense novelGene_SIKE1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4757.3 chr7 + 1871 10 novel_not_in_catalog NUB1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1403 None 9 3 0 TRUE 0 0 NA B coding 267 801 90 890 PB.3136.1 chr4 - 1241 9 full-splice_match AGA ENST00000264595.6 2107 9 66 800 no_subtype FALSE canonical NA NA 189 None 3 0 0 FALSE 0 0 NA A coding 346 1038 63 1100 PB.4016.1 chr6 + 2901 10 novel_not_in_catalog CYB5R4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2701 None 3 26 2 TRUE 0 0 NA C coding 234 702 94 795 PB.3946.4 chr6 + 2530 12 novel_not_in_catalog HSP90AB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2138 None 3 7 1 FALSE 0 0 NA C coding 724 2172 74 2245 PB.10965.3 chrX - 3212 10 full-splice_match TFE3 ENST00000493583.5 3279 10 60 7 no_subtype FALSE canonical NA NA 240 None 13 4 0 FALSE 0 0 NA C coding 470 1410 375 1784 PB.10965.2 chrX - 3433 10 full-splice_match TFE3 ENST00000315869.7 3415 10 -23 5 no_subtype FALSE canonical NA NA 399 None 52 7 0 FALSE 0 0 NA C coding 575 1725 284 2008 PB.7205.3 chr12 + 3718 17 novel_not_in_catalog TXNRD1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1790 None 4 22 3 TRUE 0 0 NA C coding 497 1491 360 1850 PB.7205.2 chr12 + 3531 17 novel_not_in_catalog TXNRD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1600 None 3 25 4 TRUE 0 0 NA C coding 497 1491 170 1660 PB.7205.5 chr12 + 3440 14 novel_in_catalog TXNRD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1512 None 7 15 1 FALSE 0 0 NA C coding 497 1491 82 1572 PB.7205.4 chr12 + 3492 15 novel_not_in_catalog TXNRD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1570 None 2 16 1 TRUE 0 0 NA C coding 497 1491 140 1630 PB.7205.7 chr12 + 3484 14 incomplete-splice_match TXNRD1 ENST00000525566.5 3836 17 349 3 internal_fragment FALSE canonical NA NA 1556 None 33 15 0 FALSE 0 0 NA C coding 497 1491 126 1616 PB.270.2 chr1 - 2680 6 novel_not_in_catalog C1orf109 novel NA NA NA NA no_subtype FALSE canonical NA NA 30 None 5 13 1 TRUE 0 0 NA A coding 203 609 524 1132 PB.359.3 chr1 + 1480 1 incomplete-splice_match RNF11 ENST00000242719.3 3084 3 1248 357 no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.359.1 chr1 + 2648 3 full-splice_match RNF11 ENST00000242719.3 3084 3 82 354 no_subtype FALSE canonical NA NA 697 None 36 8 0 FALSE 0 0 NA C coding 154 462 405 866 PB.8624.1 chr16 + 2687 22 full-splice_match NUP93 ENST00000308159.9 2741 22 47 7 no_subtype FALSE canonical NA NA 2423 None 33 2 1 FALSE 0 0 NA A coding 819 2457 75 2531 PB.2059.2 chr3 - 4001 2 genic_intron novelGene_250 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3172 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3946.9 chr6 + 1502 6 novel_in_catalog HSP90AB1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1110 None 2 3 0 FALSE 0 0 NA C coding 362 1086 132 1217 PB.1768.1 chr2 - 3662 1 novel_in_catalog ANKRD44 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 10 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7771.2 chr14 + 2688 3 genic_intron novelGene_636 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1383 None 2 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3808.1 chr6 + 1665 4 full-splice_match TNF ENST00000449264.2 1676 4 1 10 no_subtype FALSE canonical NA NA 454 None 5 4 0 FALSE 0 0 NA A coding 233 699 175 873 PB.7678.1 chr14 + 2823 15 novel_not_in_catalog PRPF39 novel NA NA NA NA no_subtype FALSE canonical NA NA 2088 None 32 7 0 TRUE 0 0 NA B coding 669 2007 136 2142 PB.9973.2 chr19 - 1389 5 full-splice_match LGALS4 ENST00000595278.5 1345 5 -64 20 no_subtype FALSE canonical NA NA 104 None 2 7 0 FALSE 0 0 NA C coding 171 513 60 572 PB.9973.1 chr19 - 1114 10 full-splice_match LGALS4 ENST00000307751.8 1535 10 419 2 no_subtype FALSE canonical NA NA 104 None 7 0 0 FALSE 0 0 NA C coding 323 969 60 1028 PB.7678.2 chr14 + 3078 16 novel_in_catalog PRPF39 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2336 None 3 13 0 FALSE 0 0 NA B coding 548 1644 747 2390 PB.2246.1 chr3 - 2786 15 novel_in_catalog NEK4 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 276 None 2 8 0 FALSE 0 0 NA B coding 795 2385 184 2568 PB.7678.4 chr14 + 3598 14 novel_in_catalog PRPF39 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2858 None 2 21 0 FALSE 0 0 NA B coding 273 819 2094 2912 PB.2246.2 chr3 - 2862 13 novel_in_catalog NEK4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 293 None 2 3 0 FALSE 0 0 NA B coding 745 2235 201 2435 PB.5260.4 chr9 - 4095 7 novel_not_in_catalog B4GALT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 45 None 6 23 0 TRUE 0 0 NA C coding 398 1194 92 1285 PB.5844.2 chr10 - 1347 5 novel_not_in_catalog MRPS16 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 45 None 4 14 1 TRUE 0 0 NA B coding 137 411 129 539 PB.5844.3 chr10 - 1539 5 novel_not_in_catalog MRPS16 novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 3 17 2 TRUE 0 0 NA B coding 137 411 91 501 PB.10448.1 chr20 - 2768 6 full-splice_match ZFP64 ENST00000216923.4 3264 6 209 287 no_subtype FALSE canonical NA NA 187 None 15 10 1 FALSE 0 0 NA A coding 681 2043 142 2184 PB.5260.1 chr9 - 3624 6 full-splice_match B4GALT1 ENST00000379731.4 4201 6 559 18 no_subtype FALSE canonical NA NA 40 None 16 22 0 FALSE 0 0 NA C coding 258 774 49 822 PB.5260.2 chr9 - 2113 1 incomplete-splice_match B4GALT1 ENST00000379731.4 4201 6 2081 8 no_subtype FALSE canonical NA NA NA None 5 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7289.1 chr12 - 3120 2 genic_intron novelGene_1029 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1284 None 4 21 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.7155.3 chr12 - 1664 3 novel_not_in_catalog BTG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 188 None 7 7 0 TRUE 0 0 NA B coding 171 513 198 710 PB.1940.3 chr2 + 4172 7 novel_in_catalog LRRFIP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 809 None 3 19 0 FALSE 0 0 NA C coding 273 819 231 1049 PB.6297.3 chr11 - 2858 19 novel_in_catalog PHF21A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 291 None 6 5 1 FALSE 0 0 NA A coding 681 2043 528 2570 PB.10428.3 chr20 - 3762 22 full-splice_match ZMYND8 ENST00000360911.7 4991 22 -22 1251 no_subtype FALSE canonical NA NA 72 None 8 2 0 FALSE 0 0 NA C coding 1135 3405 59 3463 PB.10428.1 chr20 - 3886 22 novel_in_catalog ZMYND8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 106 None 3 12 1 FALSE 0 0 NA C coding 1187 3561 25 3585 PB.10971.1 chrX - 5608 42 novel_not_in_catalog CACNA1F novel NA NA NA NA no_subtype TRUE non_canonical NA NA 192 None 2 16 2 TRUE 0 0 NA B coding 432 1296 2989 4284 PB.10971.2 chrX - 1411 11 novel_not_in_catalog CACNA1F novel NA NA NA NA no_subtype FALSE canonical NA NA 142 None 2 2 0 TRUE 0 0 NA B coding 326 978 312 1289 PB.10428.4 chr20 - 5715 2 novel_not_in_catalog ZMYND8 novel NA NA NA NA no_subtype FALSE canonical NA NA 1730 None 2 35 1 TRUE 0 0 NA C coding 134 402 4357 4758 PB.10295.1 chr20 + 3381 30 full-splice_match XRN2 ENST00000377191.4 3437 30 54 2 no_subtype FALSE canonical NA NA 2828 None 66 3 0 FALSE 0 0 NA C coding 950 2850 42 2891 PB.10295.3 chr20 + 2995 27 novel_in_catalog XRN2 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical NA NA 2476 None 2 5 0 FALSE 0 0 NA C coding 784 2352 188 2539 PB.3084.1 chr4 + 2964 2 antisense novelGene_LRBA_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1430 None 2 19 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3872.1 chr6 + 686 6 full-splice_match RPL10A ENST00000322203.6 716 6 20 10 no_subtype FALSE canonical NA NA 490 None 3 0 0 FALSE 0 0 NA A coding 217 651 8 658 PB.10295.4 chr20 + 3610 31 novel_not_in_catalog XRN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3064 None 3 5 0 TRUE 0 0 NA C coding 896 2688 440 3127 PB.2874.1 chr4 + 3143 1 novel_in_catalog CXCL8 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6981.1 chr12 + 3136 10 novel_not_in_catalog ACVR1B novel NA NA NA NA no_subtype TRUE canonical NA NA 1433 None 45 7 0 TRUE 0 0 NA A coding 505 1515 42 1556 PB.5777.1 chr10 + 2688 2 genic_intron novelGene_498 novel NA NA NA NA no_subtype FALSE canonical NA NA 1006 None 5 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9538.1 chr18 - 4404 8 novel_not_in_catalog RPRD1A novel NA NA NA NA no_subtype FALSE canonical NA NA 298 None 7 14 0 TRUE 0 0 NA B coding 312 936 148 1083 PB.9538.2 chr18 - 2230 6 novel_in_catalog RPRD1A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 293 None 2 7 0 FALSE 0 0 NA B coding 270 810 143 952 PB.3297.1 chr5 + 1444 9 incomplete-splice_match SREK1 ENST00000334121.10 6781 12 117 5220 3prime_fragment FALSE canonical NA NA 1163 None 15 2 0 FALSE 0 0 NA B coding 467 1401 43 1443 PB.3297.2 chr5 + 1680 10 incomplete-splice_match SREK1 ENST00000334121.10 6781 12 11 5090 3prime_fragment FALSE canonical NA NA 1632 None 6 1 0 FALSE 0 0 NA B coding 510 1530 149 1678 PB.3297.3 chr5 + 2820 8 novel_not_in_catalog SREK1 novel NA NA NA NA no_subtype TRUE canonical NA NA 875 None 2 8 0 TRUE 0 0 NA B coding 71 213 810 1022 PB.10604.5 chr21 - 2732 16 novel_not_in_catalog ITGB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 8 None 2 4 0 FALSE 0 0 NA C coding 769 2307 12 2318 PB.10290.6 chr20 + 2728 1 genic_intron novelGene_189 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8490.1 chr16 + 1587 14 full-splice_match UQCRC2 ENST00000268379.8 2615 14 720 308 no_subtype FALSE canonical NA NA 1322 None 86 2 0 FALSE 0 0 NA C coding 453 1359 45 1403 PB.8490.2 chr16 + 1530 1 novel_in_catalog UQCRC2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8490.3 chr16 + 1514 3 novel_not_in_catalog UQCRC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 697 None 2 7 1 TRUE 0 0 NA C coding 148 444 70 513 PB.7051.6 chr12 - 3385 23 novel_not_in_catalog STAT6 novel NA NA NA NA no_subtype TRUE canonical NA NA 86 None 37 5 0 TRUE 0 0 NA B coding 847 2541 108 2648 PB.3479.1 chr5 + 1514 1 antisense novelGene_SKP1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1873.1 chr2 + 1407 8 full-splice_match STK16 ENST00000409638.7 2868 8 27 1434 no_subtype FALSE canonical NA NA 924 None 10 3 0 FALSE 0 0 NA A coding 305 915 146 1060 PB.626.1 chr1 + 2759 5 antisense novelGene_LIX1L_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1126 None 2 18 4 FALSE 0 0 NA A non_coding NA NA NA NA PB.2708.2 chr4 + 2740 17 novel_not_in_catalog TACC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2523 None 18 10 2 TRUE 0 0 NA C coding 255 765 1822 2586 PB.7748.2 chr14 - 2082 1 genic_intron novelGene_593 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4237.3 chr6 - 2863 10 novel_in_catalog TCP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 195 None 4 13 0 FALSE 0 0 NA C coding 283 849 132 980 PB.5268.1 chr9 - 1433 8 fusion RPP25L,DCTN3 novel NA NA NA NA no_subtype FALSE canonical NA NA 113 None 2 1 0 FALSE 0 0 NA A coding 186 558 18 575 PB.5268.2 chr9 - 3824 5 novel_in_catalog DCTN3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 113 None 2 15 0 FALSE 0 0 NA A coding 172 516 18 533 PB.7783.1 chr14 + 3260 10 novel_not_in_catalog EXD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1790 None 11 5 0 TRUE 0 0 NA B coding 621 1863 142 2004 PB.8331.1 chr15 - 2624 1 incomplete-splice_match CHSY1 ENST00000254190.3 4550 3 1824 103 no_subtype FALSE canonical NA NA NA None 7 12 0 FALSE 0 0 NA A coding 340 1020 40 1059 PB.7241.2 chr12 - 3493 21 novel_not_in_catalog GIT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 129 None 8 4 0 TRUE 0 0 NA C coding 759 2277 78 2354 PB.607.3 chr1 + 2580 1 genic FAM46C novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 21 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7959.179 chr14 - 1465 8 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 56 None 2 11 4 TRUE 0 0 NA B coding 196 588 743 1330 PB.607.1 chr1 + 1985 2 full-splice_match FAM46C ENST00000369448.3 5751 2 115 3651 no_subtype FALSE canonical NA NA 105 None 91 1 0 FALSE 0 0 NA C coding 391 1173 133 1305 PB.4990.1 chr8 - 4385 9 novel_not_in_catalog PAG1 novel NA NA NA NA no_subtype FALSE canonical NA NA 478 None 2 38 2 FALSE 0 0 NA C coding 432 1296 723 2018 PB.2160.5 chr3 - 3782 21 novel_in_catalog SCAP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 64 None 4 1 0 FALSE 0 0 NA B coding 1048 3144 503 3646 PB.5839.3 chr10 + 3224 2 novel_not_in_catalog MCU novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3194 None 2 22 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.7400.3 chr13 - 3261 5 full-splice_match RNF6 ENST00000346166.7 3282 5 0 21 no_subtype FALSE canonical NA NA 61 None 11 7 0 FALSE 0 0 NA C coding 685 2055 163 2217 PB.4990.7 chr8 - 1570 1 genic_intron novelGene_749 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7400.1 chr13 - 3028 5 full-splice_match RNF6 ENST00000381588.8 3706 5 179 499 no_subtype FALSE canonical NA NA 312 None 36 4 1 FALSE 0 0 NA C coding 685 2055 414 2468 PB.834.1 chr1 + 3821 6 full-splice_match POGK ENST00000367876.8 5754 6 52 1881 no_subtype FALSE canonical NA NA 1942 None 18 6 0 FALSE 0 0 NA A coding 609 1827 99 1925 PB.10154.3 chr19 + 3024 4 novel_not_in_catalog ZNF766 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 782 None 2 30 1 TRUE 0 0 NA B coding 137 411 8 418 PB.9928.1 chr19 - 4102 4 full-splice_match ZNF792 ENST00000404801.1 3888 4 -217 3 no_subtype FALSE canonical NA NA 637 None 3 11 0 FALSE 0 0 NA A coding 632 1896 605 2500 PB.11145.1 chrX - 2910 2 genic TENM1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1956 None 9 19 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.5508.1 chr9 + 3290 18 novel_in_catalog GAPVD1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 3278 None 3 0 0 FALSE 0 0 NA B coding 992 2976 314 3289 PB.7241.6 chr12 - 2755 20 full-splice_match GIT2 ENST00000355312.7 5466 20 -116 2827 no_subtype FALSE canonical NA NA 168 None 2 1 0 FALSE 0 0 NA C coding 759 2277 117 2393 PB.8277.3 chr15 + 5980 2 novel_not_in_catalog ISG20 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2775 None 6 28 0 TRUE 0 0 NA C coding 108 324 3795 4118 PB.8277.2 chr15 + 1548 4 full-splice_match ISG20 ENST00000306072.9 1856 4 305 3 no_subtype FALSE canonical NA NA 482 None 25 6 1 FALSE 0 0 NA C coding 181 543 54 596 PB.8277.1 chr15 + 1634 2 novel_in_catalog ISG20 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 31 None 11 12 1 FALSE 0 0 NA C coding 169 507 56 562 PB.10486.1 chr20 + 1858 2 novel_in_catalog TNFRSF6B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 508 None 4 8 0 FALSE 0 0 NA A coding 211 633 85 717 PB.6398.1 chr11 - 1217 1 antisense novelGene_RTN3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1166.3 chr1 - 2758 2 novel_in_catalog SH3BP5L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 70 None 6 33 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7899.5 chr14 + 4373 21 novel_in_catalog PAPOLA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2213 None 2 23 2 FALSE 0 0 NA C coding 495 1485 822 2306 PB.7959.173 chr14 - 1577 11 fusion IGHG1,IGHV3-7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 122 None 2 27 6 TRUE 0 0 NA B coding 196 588 855 1442 PB.10997.1 chrX + 1454 1 full-splice_match MAGEH1 ENST00000342972.2 1462 1 -8 16 no_subtype FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA C coding 219 657 279 935 PB.648.1 chr1 - 3224 1 antisense novelGene_VPS45_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5155.1 chr8 + 2619 2 full-splice_match ZNF623 ENST00000526926.5 2612 2 -6 -1 no_subtype FALSE canonical NA NA 139 None 6 9 0 FALSE 0 0 NA C coding 496 1488 235 1722 PB.379.1 chr1 + 1717 8 full-splice_match LRRC42 ENST00000319223.8 1727 8 6 4 no_subtype FALSE canonical NA NA 1217 None 13 1 0 FALSE 0 0 NA A coding 428 1284 206 1489 PB.4986.1 chr8 - 3277 1 full-splice_match THAP12P7 ENST00000520248.1 2290 1 -84 -903 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C coding 623 1869 285 2153 PB.4986.2 chr8 + 1919 1 antisense novelGene_IL7_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 11 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9510.1 chr18 + 3245 20 novel_not_in_catalog RBBP8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2905 None 2 7 0 TRUE 0 0 NA A coding 897 2691 310 3000 PB.697.1 chr1 - 2010 4 full-splice_match SLC39A1 ENST00000356205.8 2084 4 56 18 no_subtype FALSE canonical NA NA 22 None 55 4 0 FALSE 0 0 NA A coding 324 972 55 1026 PB.7959.170 chr14 - 1553 12 fusion IGHV1-24,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 104 None 2 10 6 TRUE 0 0 NA B coding 196 588 831 1418 PB.3986.1 chr6 + 2761 1 genic OGFRL1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11188.1 chrX - 3512 11 full-splice_match CD99L2 ENST00000370377.7 3604 11 85 7 no_subtype FALSE canonical NA NA 100 None 31 13 0 FALSE 0 0 NA A coding 262 786 34 819 PB.7899.1 chr14 + 4476 22 full-splice_match PAPOLA ENST00000216277.12 4519 22 44 -1 no_subtype FALSE canonical NA NA 2318 None 49 8 0 FALSE 0 0 NA C coding 745 2235 177 2411 PB.3587.11 chr5 - 2806 19 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 119 None 3 10 0 TRUE 0 0 NA B coding 623 1869 156 2024 PB.7899.3 chr14 + 4311 20 novel_in_catalog PAPOLA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2152 None 8 9 0 FALSE 0 0 NA C coding 699 2097 149 2245 PB.7119.1 chr12 - 1064 8 novel_not_in_catalog TSPAN8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 177 None 18 7 1 TRUE 0 0 NA B coding 171 513 315 827 PB.9920.2 chr19 + 3016 20 novel_not_in_catalog GPATCH1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2741 None 2 6 0 FALSE 0 0 NA C coding 622 1866 11 1876 PB.9920.1 chr19 + 3048 20 full-splice_match GPATCH1 ENST00000170564.6 3492 20 306 138 no_subtype FALSE canonical NA NA 2773 None 16 1 0 FALSE 0 0 NA C coding 931 2793 9 2801 PB.7119.2 chr12 - 1442 7 novel_not_in_catalog TSPAN8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 177 None 2 10 1 TRUE 0 0 NA B coding 176 528 315 842 PB.3714.1 chr6 + 3120 12 novel_not_in_catalog RIPK1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2144 None 3 7 1 TRUE 0 0 NA A coding 671 2013 416 2428 PB.1200.5 chr2 - 3240 1 genic_intron novelGene_146 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 11 0 FALSE 0 0 NA A coding 113 339 539 877 PB.10055.2 chr19 - 1536 1 antisense novelGene_BLOC1S3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10727.1 chr22 + 2495 17 full-splice_match MCM5 ENST00000216122.8 3534 17 104 935 no_subtype FALSE canonical NA NA 2153 None 19 3 0 FALSE 0 0 NA A coding 734 2202 51 2252 PB.9900.2 chr19 + 6596 2 genic_intron novelGene_180 novel NA NA NA NA no_subtype FALSE canonical NA NA 713 None 5 33 1 FALSE 0 0 NA A coding 185 555 1847 2401 PB.10481.2 chr20 + 3104 14 novel_not_in_catalog ARFGAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1822 None 2 20 0 TRUE 0 0 NA B coding 343 1029 184 1212 PB.7147.2 chr12 - 2419 3 full-splice_match DUSP6 ENST00000279488.7 4400 3 774 1207 no_subtype TRUE canonical NA NA 858 None 148 9 0 FALSE 0 0 NA C coding 368 1104 498 1601 PB.9298.2 chr17 - 3023 6 novel_not_in_catalog ICAM2 novel NA NA NA NA no_subtype TRUE canonical NA NA 65 None 2 13 1 TRUE 0 0 NA C coding 275 825 110 934 PB.2881.1 chr4 + 3907 25 novel_not_in_catalog USO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2909 None 41 2 0 TRUE 0 0 NA B coding 962 2886 111 2996 PB.2881.2 chr4 + 2010 17 incomplete-splice_match USO1 ENST00000514213.6 4034 24 113 1911 3prime_fragment TRUE canonical NA NA 1978 None 6 1 0 FALSE 0 0 NA B coding 632 1896 115 2010 PB.1644.1 chr2 + 3163 26 novel_not_in_catalog RIF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3086 None 2 8 1 FALSE 0 0 NA A coding 601 1803 128 1930 PB.1946.2 chr2 - 4043 23 novel_not_in_catalog PER2 novel NA NA NA NA no_subtype FALSE canonical NA NA 138 None 5 9 1 FALSE 0 0 NA A coding 1255 3765 158 3922 PB.847.1 chr1 + 3248 20 full-splice_match DCAF6 ENST00000367843.7 3302 20 51 3 no_subtype FALSE canonical NA NA 2778 None 15 3 0 FALSE 0 0 NA C coding 880 2640 201 2840 PB.903.2 chr1 - 1363 7 full-splice_match GLUL ENST00000331872.10 4364 7 416 2585 no_subtype FALSE canonical NA NA 112 None 1388 1 0 FALSE 0 0 NA C coding 373 1119 126 1244 PB.7881.3 chr14 - 2129 1 genic_intron novelGene_855 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.371.1 chr1 + 2434 10 full-splice_match PRPF38A ENST00000257181.9 5274 10 178 2662 no_subtype FALSE canonical NA NA 904 None 16 16 0 FALSE 0 0 NA A coding 312 936 9 944 PB.5676.4 chr10 - 2028 1 genic_intron novelGene_86 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 26 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7273.1 chr12 + 2560 7 novel_in_catalog OAS3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1431 None 21 3 0 FALSE 0 0 NA B coding 596 1788 58 1845 PB.5855.1 chr10 + 5274 22 novel_not_in_catalog VCL novel NA NA NA NA no_subtype FALSE canonical NA NA 3146 None 7 12 0 TRUE 0 0 NA B coding 1066 3198 93 3290 PB.3216.18 chr5 - 3947 3 novel_not_in_catalog FYB novel NA NA NA NA no_subtype TRUE canonical NA NA 698 None 2 23 1 TRUE 0 0 NA B coding 104 312 1468 1779 PB.7273.4 chr12 + 6574 17 novel_not_in_catalog OAS3 novel NA NA NA NA no_subtype FALSE canonical NA NA 3293 None 76 13 0 TRUE 0 0 NA B coding 1087 3261 42 3302 PB.3216.14 chr5 - 2539 7 novel_not_in_catalog FYB novel NA NA NA NA no_subtype FALSE canonical NA NA 121 None 5 4 0 TRUE 0 0 NA B coding 472 1416 149 1564 PB.7959.121 chr14 - 1540 8 fusion IGHA1,IGHV3-43 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 128 None 2 15 4 TRUE 0 0 NA A coding 471 1413 83 1495 PB.5367.2 chr9 - 2685 7 full-splice_match OGN ENST00000375561.9 2743 7 45 13 no_subtype FALSE canonical NA NA 73 None 10 14 0 FALSE 0 0 NA A coding 298 894 149 1042 PB.3216.11 chr5 + 6438 5 antisense novelGene_FYB_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 6318 None 2 46 1 FALSE 0 0 NA B coding 127 381 5939 6319 PB.3216.10 chr5 + 2951 2 antisense novelGene_FYB_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 835 None 3 16 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.3216.12 chr5 - 1542 7 novel_not_in_catalog FYB novel NA NA NA NA no_subtype FALSE canonical NA NA 121 None 56 0 0 TRUE 0 0 NA B coding 464 1392 149 1540 PB.928.3 chr1 - 6734 47 incomplete-splice_match TPR ENST00000367478.8 9708 51 795 2179 5prime_fragment FALSE canonical NA NA 33 None 2 0 0 FALSE 0 0 NA C coding 2124 6372 220 6591 PB.1919.3 chr2 + 3247 1 genic_intron novelGene_1411 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1919.1 chr2 + 3094 24 novel_not_in_catalog DIS3L2 novel NA NA NA NA no_subtype TRUE canonical NA NA 2588 None 17 5 0 TRUE 0 0 NA A coding 885 2655 93 2747 PB.2870.1 chr4 + 2948 1 incomplete-splice_match SLC4A4 ENST00000425175.5 7596 25 4639 10 no_subtype FALSE canonical NA NA NA None 7 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6130.4 chr11 + 5708 13 novel_not_in_catalog LSP1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2942 None 4 24 2 TRUE 0 0 NA C coding 339 1017 51 1067 PB.1534.1 chr2 + 2910 7 incomplete-splice_match GCC2 ENST00000309863.10 7537 23 664 3963 3prime_fragment FALSE canonical NA NA 2837 None 15 3 0 FALSE 0 0 NA B coding 953 2859 51 2909 PB.6130.1 chr11 + 1529 11 full-splice_match LSP1 ENST00000311604.7 1699 11 162 8 no_subtype FALSE canonical NA NA 1046 None 572 5 0 FALSE 0 0 NA C coding 339 1017 14 1030 PB.5141.1 chr8 + 3069 3 genic_intron novelGene_1190 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 317 None 2 24 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6130.3 chr11 + 1427 13 novel_not_in_catalog LSP1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 947 None 2 8 4 TRUE 0 0 NA C coding 123 369 888 1256 PB.6130.2 chr11 + 1363 10 novel_in_catalog LSP1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 881 None 119 4 0 FALSE 0 0 NA C coding 284 852 14 865 PB.365.2 chr1 - 1944 1 full-splice_match KTI12 ENST00000371614.1 1714 1 12 -242 no_subtype FALSE canonical NA NA NA None 10 9 0 FALSE 0 0 NA A coding 354 1062 44 1105 PB.7010.3 chr12 + 2731 4 novel_in_catalog COPZ1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1365 None 2 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.365.1 chr1 - 1405 7 full-splice_match TXNDC12 ENST00000371626.8 2396 7 980 11 no_subtype FALSE canonical NA NA 192 None 30 5 0 FALSE 0 0 NA A coding 172 516 96 611 PB.10988.1 chrX + 1512 1 genic_intron novelGene_528 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3621.6 chr5 - 1459 1 genic_intron novelGene_1272 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3621.4 chr5 - 3583 2 genic_intron novelGene_1269 novel NA NA NA NA no_subtype TRUE canonical NA NA 3489 None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8073.1 chr15 - 3827 13 full-splice_match COPS2 ENST00000299259.10 2036 13 80 -1871 no_subtype FALSE canonical NA NA 57 None 2 22 1 FALSE 0 0 NA C coding 450 1350 4 1353 PB.3621.1 chr5 - 2671 16 full-splice_match EBF1 ENST00000313708.10 5250 16 -188 2767 no_subtype TRUE canonical NA NA 605 None 6 10 0 FALSE 0 0 NA A coding 591 1773 472 2244 PB.8073.2 chr15 - 1955 13 full-splice_match COPS2 ENST00000388901.9 6628 13 59 4614 no_subtype FALSE canonical NA NA 69 None 10 1 0 FALSE 0 0 NA C coding 443 1329 16 1344 PB.973.1 chr1 + 2652 7 novel_in_catalog TMEM183A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1968 None 2 7 0 FALSE 0 0 NA C coding 198 594 164 757 PB.973.2 chr1 + 1540 8 full-splice_match TMEM183A ENST00000367242.3 3019 8 10 1469 no_subtype FALSE canonical NA NA 1015 None 73 1 0 FALSE 0 0 NA C coding 376 1128 71 1198 PB.6412.12 chr11 - 2014 12 novel_in_catalog SF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 169 None 2 2 1 FALSE 0 0 NA C coding 524 1572 408 1979 PB.7799.1 chr14 + 5840 28 novel_not_in_catalog PAPLN novel NA NA NA NA no_subtype FALSE canonical NA NA 3714 None 6 12 0 TRUE 0 0 NA A coding 1271 3813 69 3881 PB.10175.1 chr19 + 1361 6 full-splice_match CCDC106 ENST00000308964.7 1546 6 177 8 no_subtype FALSE canonical NA NA 637 None 4 3 0 FALSE 0 0 NA A coding 280 840 112 951 PB.422.1 chr1 - 5960 12 full-splice_match SLC35D1 ENST00000235345.5 6162 12 149 53 no_subtype FALSE canonical NA NA 140 None 2 30 0 FALSE 0 0 NA C coding 325 975 28 1002 PB.629.8 chr1 - 3004 7 novel_in_catalog TXNIP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 561 None 2 31 3 FALSE 0 0 NA C coding 366 1098 312 1409 PB.10753.1 chr22 - 6033 16 novel_not_in_catalog PLA2G6 novel NA NA NA NA no_subtype FALSE canonical NA NA 81 None 2 32 0 TRUE 0 0 NA A coding 352 1056 4317 5372 PB.5056.1 chr8 + 1822 13 full-splice_match ATP6V1C1 ENST00000518738.1 2130 13 25 283 no_subtype FALSE canonical NA NA 1191 None 12 2 0 FALSE 0 0 NA C coding 382 1146 139 1284 PB.7478.2 chr13 - 2129 11 full-splice_match SUCLA2 ENST00000378654.8 2192 11 61 2 no_subtype FALSE canonical NA NA 114 None 17 4 0 FALSE 0 0 NA C coding 463 1389 25 1413 PB.2118.1 chr3 - 3814 4 antisense novelGene_TRAK1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 26 None 3 11 1 FALSE 0 0 NA A coding 134 402 2109 2510 PB.6785.2 chr12 - 2548 2 novel_not_in_catalog LPAR5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2062 None 4 8 0 TRUE 0 0 NA A coding 372 1116 219 1334 PB.1647.1 chr2 - 1447 6 full-splice_match ARL5A ENST00000295087.12 5326 6 58 3821 no_subtype FALSE canonical NA NA 300 None 63 3 0 FALSE 0 0 NA A coding 179 537 255 791 PB.1911.2 chr2 + 1888 7 novel_not_in_catalog ITM2C novel NA NA NA NA no_subtype TRUE canonical NA NA 651 None 302 6 0 TRUE 0 0 NA B coding 205 615 126 740 PB.1911.1 chr2 + 1879 6 novel_in_catalog ITM2C novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 643 None 2 11 1 FALSE 0 0 NA B coding 203 609 124 732 PB.521.1 chr1 + 1745 11 full-splice_match SLC30A7 ENST00000357650.8 1281 11 -139 -325 no_subtype FALSE canonical NA NA 1231 None 19 3 0 FALSE 0 0 NA C coding 376 1128 149 1276 PB.6350.10 chr11 + 3112 1 novel_in_catalog MS4A1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7737.1 chr14 - 1533 5 full-splice_match L3HYPDH ENST00000247194.8 1527 5 15 -21 no_subtype FALSE canonical NA NA 607 None 2 6 0 FALSE 0 0 NA A coding 354 1062 100 1161 PB.2030.1 chr3 - 1935 9 full-splice_match SH3BP5 ENST00000383791.7 2822 9 67 820 no_subtype FALSE canonical NA NA 292 None 105 1 0 FALSE 0 0 NA C coding 455 1365 155 1519 PB.7026.1 chr12 + 3233 5 novel_in_catalog RAB5B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 627 None 126 9 0 FALSE 0 0 NA A coding 215 645 96 740 PB.3042.1 chr4 - 2711 24 novel_not_in_catalog SCLT1 novel NA NA NA NA no_subtype TRUE canonical NA NA 435 None 6 2 0 TRUE 0 0 NA A coding 688 2064 402 2465 PB.1611.1 chr2 + 3557 6 full-splice_match HNMT ENST00000280097.4 3295 6 170 -432 no_subtype FALSE canonical NA NA 535 None 27 29 0 FALSE 0 0 NA C coding 292 876 13 888 PB.6559.1 chr11 - 1617 13 full-splice_match ALG8 ENST00000299626.9 1675 13 50 8 no_subtype FALSE canonical NA NA 117 None 4 0 0 FALSE 0 0 NA A coding 526 1578 23 1600 PB.1776.7 chr2 - 5647 2 genic ANKRD44-IT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 4991 None 2 31 0 TRUE 0 0 NA A coding 101 303 4166 4468 PB.1963.2 chr2 - 2099 12 full-splice_match STK25 ENST00000403346.7 2210 12 103 8 no_subtype FALSE canonical NA NA 81 None 5 4 0 FALSE 0 0 NA C coding 426 1278 182 1459 PB.963.1 chr1 - 1653 7 full-splice_match ARL8A ENST00000272217.6 1793 7 106 34 no_subtype FALSE canonical NA NA 186 None 12 5 0 FALSE 0 0 NA A coding 186 558 64 621 PB.8398.3 chr16 + 2745 3 novel_not_in_catalog ZNF263 novel NA NA NA NA no_subtype FALSE canonical NA NA 689 None 9 6 0 TRUE 0 0 NA C coding 226 678 300 977 PB.8398.2 chr16 + 3209 6 full-splice_match ZNF263 ENST00000219069.5 3830 6 612 9 no_subtype FALSE canonical NA NA 1150 None 13 5 0 FALSE 0 0 NA C coding 683 2049 265 2313 PB.8398.1 chr16 + 2760 2 full-splice_match ZNF263 ENST00000574253.1 1139 2 -12 -1609 no_subtype FALSE canonical NA NA 708 None 2 13 0 FALSE 0 0 NA C coding 226 678 322 999 PB.8416.2 chr16 - 2066 6 novel_not_in_catalog CDIP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 97 None 12 14 1 TRUE 0 0 NA C coding 208 624 199 822 PB.8398.6 chr16 + 2743 2 novel_not_in_catalog ZNF263 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 649 None 2 10 1 TRUE 0 0 NA C coding 238 714 266 979 PB.8398.5 chr16 + 2951 4 novel_in_catalog ZNF263 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 896 None 5 5 0 FALSE 0 0 NA C coding 598 1794 266 2059 PB.8416.1 chr16 - 2103 6 full-splice_match CDIP1 ENST00000563332.6 2774 6 39 632 no_subtype FALSE canonical NA NA 107 None 32 7 0 FALSE 0 0 NA C coding 208 624 212 835 PB.7959.147 chr14 - 1502 10 fusion IGHV4-61,IGHG1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 11 3 TRUE 0 0 NA A coding 196 588 779 1366 PB.5936.2 chr10 + 3547 6 novel_in_catalog ZNF518A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 650 None 2 12 0 FALSE 0 0 NA B coding 923 2769 777 3545 PB.7959.145 chr14 - 3024 12 fusion IGHV4-59,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 94 None 2 26 5 TRUE 0 0 NA A coding 265 795 816 1610 PB.7959.142 chr14 - 3034 12 fusion IGHV4-31,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 90 None 2 29 4 TRUE 0 0 NA A coding 265 795 826 1620 PB.10100.6 chr19 + 1645 10 novel_not_in_catalog SNRNP70 novel NA NA NA NA no_subtype FALSE canonical NA NA 865 None 3 2 0 FALSE 0 0 NA B coding 428 1284 201 1484 PB.3613.6 chr5 + 7366 4 novel_in_catalog ITK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 439 None 3 36 0 FALSE 0 0 NA C coding 168 504 115 618 PB.7959.141 chr14 - 3075 7 novel_not_in_catalog IGHG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 496 None 11 20 1 TRUE 0 0 NA B coding 265 795 863 1657 PB.1688.2 chr2 + 1491 1 antisense novelGene_TLK1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA B coding 101 303 81 383 PB.9407.1 chr17 - 2723 2 full-splice_match SOCS3 ENST00000330871.3 2734 2 0 11 no_subtype FALSE canonical NA NA 328 None 8 11 0 FALSE 0 0 NA A coding 214 642 450 1091 PB.561.1 chr1 - 2718 9 novel_not_in_catalog DRAM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 198 None 2 14 2 FALSE 0 0 NA B coding 230 690 277 966 PB.1194.2 chr2 + 3033 3 full-splice_match TRIB2 ENST00000155926.8 4391 3 1349 9 no_subtype FALSE canonical NA NA 633 None 25 7 0 FALSE 0 0 NA C coding 343 1029 71 1099 PB.2977.3 chr4 - 6470 13 novel_not_in_catalog PPP3CA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 69 None 2 36 0 TRUE 0 0 NA C coding 465 1395 509 1903 PB.1194.1 chr2 + 4104 4 novel_not_in_catalog TRIB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1700 None 10 12 0 TRUE 0 0 NA C coding 207 621 1546 2166 PB.7450.1 chr13 - 1304 7 novel_not_in_catalog MRPS31 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 196 None 6 2 0 FALSE 0 0 NA B coding 388 1164 72 1235 PB.9854.1 chr19 + 622 1 antisense novelGene_CTC-429P9.3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7450.2 chr13 - 2843 7 novel_not_in_catalog MRPS31 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1738 None 12 15 0 FALSE 0 0 NA B coding 347 1041 1737 2777 PB.7450.4 chr13 - 2723 1 genic MRPS31 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 20 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3588.1 chr5 - 2427 26 full-splice_match ANXA6 ENST00000354546.9 2593 26 158 8 no_subtype FALSE canonical NA NA 45 None 54 4 0 FALSE 0 0 NA A coding 673 2019 71 2089 PB.3785.35 chr6 - 1720 1 genic_intron novelGene_236 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A coding 100 300 1062 1361 PB.5167.4 chr8 - 1329 9 novel_not_in_catalog SHARPIN novel NA NA NA NA no_subtype FALSE canonical NA NA 205 None 3 7 1 FALSE 0 0 NA B coding 264 792 378 1169 PB.9058.5 chr17 - 1523 8 novel_not_in_catalog RFFL novel NA NA NA NA no_subtype FALSE canonical NA NA 140 None 2 3 1 TRUE 0 0 NA B coding 363 1089 149 1237 PB.2037.1 chr3 + 1856 9 full-splice_match OXNAD1 ENST00000285083.9 3929 9 -21 2094 no_subtype FALSE canonical NA NA 1270 None 5 9 0 FALSE 0 0 NA A coding 312 936 487 1422 PB.9058.1 chr17 - 4074 7 novel_not_in_catalog RFFL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 170 None 2 22 1 TRUE 0 0 NA B coding 355 1065 179 1243 PB.5167.3 chr8 - 1531 7 novel_not_in_catalog SHARPIN novel NA NA NA NA no_subtype FALSE non_canonical NA NA 201 None 2 13 2 TRUE 0 0 NA B coding 159 477 1 477 PB.4156.1 chr6 - 1788 1 incomplete-splice_match NHSL1 ENST00000427025.6 7500 7 5704 9 no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2573.3 chr3 + 3491 1 incomplete-splice_match SEC62 ENST00000337002.8 6568 8 1155 1923 no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5056.2 chr8 + 5494 15 novel_not_in_catalog ATP6V1C1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4073 None 5 19 2 TRUE 0 0 NA C coding 382 1146 146 1291 PB.11074.2 chrX - 3735 18 novel_not_in_catalog SYTL4 novel NA NA NA NA no_subtype FALSE canonical NA NA 117 None 2 11 0 TRUE 0 0 NA B coding 671 2013 188 2200 PB.4188.1 chr6 + 3254 5 incomplete-splice_match TAB2 ENST00000538427.5 4240 7 984 2 internal_fragment FALSE canonical NA NA 1221 None 7 12 0 FALSE 0 0 NA A coding 452 1356 6 1361 PB.7644.1 chr14 - 1529 4 novel_in_catalog GZMB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 85 None 7 1 0 FALSE 0 0 NA B coding 219 657 31 687 PB.3603.1 chr5 + 2350 1 genic_intron novelGene_1258 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 16 0 FALSE 0 0 NA B coding 134 402 1149 1550 PB.721.1 chr1 - 1715 11 novel_not_in_catalog GBAP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 141 None 7 9 2 FALSE 0 0 NA A coding 263 789 583 1371 PB.4035.2 chr6 - 2823 17 full-splice_match MAP3K7 ENST00000369329.7 4911 17 -40 2128 no_subtype TRUE canonical NA NA 322 None 4 3 0 FALSE 0 0 NA C coding 606 1818 203 2020 PB.4035.1 chr6 - 2704 16 full-splice_match MAP3K7 ENST00000369332.7 4830 16 -6 2132 no_subtype FALSE canonical NA NA 288 None 20 8 0 FALSE 0 0 NA C coding 579 1737 169 1905 PB.5177.1 chr8 - 1537 9 novel_in_catalog VPS28 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 28 None 2 2 0 FALSE 0 0 NA A coding 115 345 1012 1356 PB.10670.2 chr22 + 6206 18 novel_not_in_catalog SPECC1L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3496 None 2 30 3 TRUE 0 0 NA C coding 1117 3351 233 3583 PB.7727.1 chr14 + 2828 16 full-splice_match TMEM260 ENST00000261556.10 4264 16 1 1435 no_subtype TRUE canonical NA NA 1990 None 3 3 0 FALSE 0 0 NA A coding 707 2121 122 2242 PB.10670.1 chr22 + 6127 16 full-splice_match SPECC1L ENST00000437398.5 6674 16 52 495 no_subtype FALSE canonical NA NA 3416 None 17 15 0 FALSE 0 0 NA C coding 1117 3351 153 3503 PB.4488.1 chr7 - 1220 5 full-splice_match TMEM243 ENST00000433078.5 1273 5 49 4 no_subtype FALSE canonical NA NA 178 None 2 8 0 FALSE 0 0 NA A coding 5 15 346 360 PB.1820.1 chr2 - 2518 19 full-splice_match NDUFS1 ENST00000233190.10 11819 19 159 9142 no_subtype FALSE canonical NA NA 104 None 11 2 0 FALSE 0 0 NA A coding 727 2181 109 2289 PB.7588.1 chr13 + 3754 3 full-splice_match CHAMP1 ENST00000361283.2 3795 3 32 9 no_subtype FALSE canonical NA NA 222 None 26 12 0 FALSE 0 0 NA A coding 812 2436 278 2713 PB.10716.1 chr22 + 2805 17 novel_not_in_catalog SLC5A1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1789 None 4 7 0 TRUE 0 0 NA A coding 664 1992 19 2010 PB.780.1 chr1 - 3369 1 antisense novelGene_LINC01133_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A coding 116 348 2760 3107 PB.8511.2 chr16 + 1574 3 genic_intron novelGene_239 novel NA NA NA NA no_subtype FALSE canonical NA NA 1371 None 2 8 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2781.1 chr4 + 1820 21 full-splice_match TBC1D19 ENST00000264866.8 2263 21 168 275 no_subtype FALSE canonical NA NA 1616 None 2 0 0 FALSE 0 0 NA A coding 526 1578 111 1688 PB.8382.5 chr16 + 2558 13 novel_in_catalog E4F1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1898 None 2 2 0 FALSE 0 0 NA C coding 526 1578 438 2015 PB.8382.2 chr16 + 2880 13 novel_in_catalog E4F1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2355 None 3 8 0 FALSE 0 0 NA C coding 447 1341 1369 2709 PB.9050.1 chr17 + 1803 1 incomplete-splice_match PSMD11 ENST00000261712.7 4098 14 2285 11 no_subtype FALSE canonical NA NA NA None 3 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8382.1 chr16 + 2576 14 full-splice_match E4F1 ENST00000301727.8 2573 14 -5 2 no_subtype FALSE canonical NA NA 2051 None 10 2 0 FALSE 0 0 NA C coding 780 2340 66 2405 PB.5588.1 chr9 - 1384 9 novel_not_in_catalog MED27 novel NA NA NA NA no_subtype FALSE canonical NA NA 226 None 2 2 0 TRUE 0 0 NA C coding 311 933 24 956 PB.2501.1 chr3 + 6465 4 novel_not_in_catalog ZBTB38 novel NA NA NA NA no_subtype FALSE canonical NA NA 4137 None 9 12 0 TRUE 0 0 NA A coding 1195 3585 172 3756 PB.438.1 chr1 - 2447 2 genic_intron novelGene_721 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2170 None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5588.2 chr9 - 1368 8 full-splice_match MED27 ENST00000292035.9 1431 8 53 10 no_subtype FALSE canonical NA NA 214 None 4 4 0 FALSE 0 0 NA C coding 311 933 12 944 PB.5588.5 chr9 - 2973 6 novel_in_catalog MED27 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 225 None 6 11 0 FALSE 0 0 NA C coding 253 759 23 781 PB.4563.1 chr7 - 2920 5 full-splice_match ACHE ENST00000302913.8 2956 5 35 1 no_subtype FALSE canonical NA NA 84 None 2 10 0 FALSE 0 0 NA A coding 617 1851 105 1955 PB.5588.7 chr9 - 1535 2 novel_in_catalog MED27 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 226 None 4 3 0 FALSE 0 0 NA C coding 120 360 24 383 PB.5588.6 chr9 - 2870 3 novel_in_catalog MED27 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 224 None 5 10 0 FALSE 0 0 NA C coding 160 480 22 501 PB.4180.2 chr6 + 2707 1 novel_in_catalog UTRN novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9557.1 chr18 + 3185 2 antisense novelGene_IER3IP1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 137 None 3 33 0 FALSE 0 0 NA A coding 106 318 129 446 PB.8203.2 chr15 + 2863 5 novel_not_in_catalog ARID3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2822 None 2 18 0 TRUE 0 0 NA B coding 243 729 176 904 PB.729.3 chr1 - 2642 12 novel_not_in_catalog YY1AP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 46 None 6 8 3 TRUE 0 0 NA B coding 730 2190 248 2437 PB.8203.1 chr15 + 3144 8 novel_not_in_catalog ARID3B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1653 None 2 19 0 TRUE 0 0 NA B coding 220 660 186 845 PB.4503.1 chr7 - 2779 18 novel_in_catalog KRIT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 75 None 4 4 0 FALSE 0 0 NA B coding 736 2208 209 2416 PB.4673.1 chr7 - 2916 2 genic_intron novelGene_1131 novel NA NA NA NA no_subtype FALSE canonical NA NA 2546 None 14 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9869.2 chr19 + 2881 4 incomplete-splice_match MAP1S ENST00000324096.8 3419 7 532 6 internal_fragment FALSE canonical NA NA 2643 None 4 4 0 FALSE 0 0 NA C coding 672 2016 781 2796 PB.9869.1 chr19 + 3283 7 full-splice_match MAP1S ENST00000324096.8 3419 7 132 4 no_subtype TRUE canonical NA NA 3043 None 62 2 0 FALSE 0 0 NA C coding 1059 3177 20 3196 PB.2610.1 chr3 + 1375 10 full-splice_match TTC14 ENST00000412756.6 4568 10 -16 3209 no_subtype FALSE canonical NA NA 1257 None 7 5 0 FALSE 0 0 NA C coding 430 1290 86 1375 PB.7125.1 chr12 + 1368 6 full-splice_match GLIPR1 ENST00000266659.7 5877 6 132 4377 no_subtype FALSE canonical NA NA 715 None 40 6 0 FALSE 0 0 NA C coding 266 798 70 867 PB.7125.2 chr12 + 4035 4 novel_not_in_catalog GLIPR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3528 None 5 22 1 TRUE 0 0 NA C coding 148 444 61 504 PB.4503.3 chr7 - 2785 2 novel_not_in_catalog KRIT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2519 None 2 24 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.8669.1 chr16 + 2024 10 full-splice_match E2F4 ENST00000379378.7 2096 10 69 3 no_subtype FALSE canonical NA NA 1116 None 23 10 0 FALSE 0 0 NA A coding 153 459 771 1229 PB.3036.1 chr4 + 3253 19 full-splice_match HSPA4L ENST00000296464.8 10790 19 171 7366 no_subtype FALSE canonical NA NA 2568 None 2 7 0 FALSE 0 0 NA A coding 839 2517 241 2757 PB.4503.2 chr7 - 2680 17 novel_in_catalog KRIT1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 106 None 7 8 0 FALSE 0 0 NA B coding 736 2208 109 2316 PB.10109.1 chr19 - 960 6 full-splice_match RRAS ENST00000246792.3 1044 6 81 3 no_subtype FALSE canonical NA NA 175 None 2 0 0 FALSE 0 0 NA A coding 218 654 23 676 PB.5664.2 chr10 + 2564 14 novel_in_catalog PFKFB3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1670 None 3 9 0 FALSE 0 0 NA C coding 521 1563 330 1892 PB.8519.5 chr16 - 5933 30 incomplete-splice_match GTF3C1 ENST00000356183.8 7018 37 1142 -57 5prime_fragment FALSE canonical NA NA 116 None 2 0 0 FALSE 0 0 NA B coding 1708 5124 78 5201 PB.291.2 chr1 - 2277 10 novel_not_in_catalog PPT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 133 None 33 13 0 TRUE 0 0 NA B coding 306 918 10 927 PB.291.3 chr1 - 2902 10 novel_not_in_catalog PPT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 214 None 2 22 2 TRUE 0 0 NA B coding 195 585 968 1552 PB.8519.3 chr16 - 7074 38 novel_not_in_catalog GTF3C1 novel NA NA NA NA no_subtype TRUE canonical NA NA 230 None 7 4 0 TRUE 0 0 NA B coding 2109 6327 10 6336 PB.8862.13 chr17 + 1667 15 novel_not_in_catalog ARRB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1120 None 2 7 2 TRUE 0 0 NA C coding 217 651 561 1211 PB.11192.2 chrX + 1537 9 novel_not_in_catalog NSDHL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 958 None 6 0 0 FALSE 0 0 NA C coding 373 1119 170 1288 PB.8862.11 chr17 + 1727 14 novel_in_catalog ARRB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1181 None 2 8 0 FALSE 0 0 NA C coding 229 687 586 1272 PB.8862.10 chr17 + 1752 15 novel_not_in_catalog ARRB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1202 None 2 11 1 TRUE 0 0 NA C coding 217 651 643 1293 PB.8862.16 chr17 + 1690 14 novel_in_catalog ARRB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1143 None 2 6 0 FALSE 0 0 NA C coding 217 651 584 1234 PB.8862.15 chr17 + 1692 15 novel_not_in_catalog ARRB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1142 None 14 6 1 FALSE 0 0 NA C coding 217 651 583 1233 PB.8862.14 chr17 + 1752 15 novel_not_in_catalog ARRB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1202 None 4 7 1 FALSE 0 0 NA C coding 217 651 643 1293 PB.6703.20 chr11 + 5501 39 novel_not_in_catalog SORL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 5312 None 4 1 0 TRUE 0 0 NA B coding 1525 4575 803 5377 PB.1388.2 chr2 + 2697 5 novel_not_in_catalog ETAA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2634 None 2 15 0 TRUE 0 0 NA B coding 145 435 111 545 PB.7617.10 chr14 - 3409 17 incomplete-splice_match ACIN1 ENST00000605057.5 4474 19 29 1036 internal_fragment FALSE canonical NA NA 150 None 2 2 0 FALSE 0 0 NA C coding 1132 3396 13 3408 PB.4476.1 chr7 + 3148 19 novel_not_in_catalog PTPN12 novel NA NA NA NA no_subtype FALSE canonical NA NA 2315 None 2 4 0 TRUE 0 0 NA B coding 780 2340 35 2374 PB.4476.2 chr7 + 3119 18 novel_not_in_catalog PTPN12 novel NA NA NA NA no_subtype FALSE canonical NA NA 2270 None 2 30 3 FALSE 0 0 NA B coding 661 1983 347 2329 PB.4476.3 chr7 + 3103 19 novel_not_in_catalog PTPN12 novel NA NA NA NA no_subtype FALSE canonical NA NA 2270 None 2 21 3 TRUE 0 0 NA B coding 661 1983 347 2329 PB.4583.1 chr7 + 2716 1 full-splice_match EIF4BP6 ENST00000431936.1 1828 1 -10 -878 no_subtype FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA C coding 331 993 11 1003 PB.1923.1 chr2 - 3193 15 full-splice_match NGEF ENST00000264051.7 3215 15 19 3 no_subtype FALSE canonical NA NA 186 None 7 7 0 FALSE 0 0 NA A coding 710 2130 261 2390 PB.8876.1 chr17 - 1511 12 incomplete-splice_match NUP88 ENST00000573584.5 2916 17 1392 13 5prime_fragment TRUE canonical NA NA 162 None 2 2 0 FALSE 0 0 NA A coding 443 1329 13 1341 PB.1879.2 chr2 + 1491 5 novel_not_in_catalog SPEG novel NA NA NA NA no_subtype FALSE canonical NA NA 688 None 2 1 0 FALSE 0 0 NA C coding 113 339 355 693 PB.5378.1 chr9 + 3652 15 incomplete-splice_match FAM120A ENST00000277165.10 5118 18 1050 416 internal_fragment FALSE canonical NA NA 2189 None 3 0 0 FALSE 0 0 NA A coding 784 2352 147 2498 PB.9861.2 chr19 + 3498 7 novel_not_in_catalog DDA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 488 None 2 15 0 TRUE 0 0 NA B coding 102 306 111 416 PB.9861.1 chr19 + 4019 6 novel_not_in_catalog DDA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 285 None 12 17 0 TRUE 0 0 NA B coding 102 306 88 393 PB.7891.1 chr14 - 2829 1 incomplete-splice_match DICER1 ENST00000393063.5 10220 28 7387 5 no_subtype FALSE canonical NA NA NA None 6 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6848.1 chr12 - 1195 6 full-splice_match ARHGDIB ENST00000228945.8 1256 6 44 17 no_subtype FALSE canonical NA NA 89 None 32 3 0 FALSE 0 0 NA C coding 201 603 102 704 PB.9881.1 chr19 + 1361 7 novel_not_in_catalog PGPEP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 517 None 2 4 0 TRUE 0 0 NA A coding 209 627 81 707 PB.6671.1 chr11 + 1405 4 incomplete-splice_match KMT2A ENST00000531904.6 4320 10 2331 584 internal_fragment FALSE canonical NA NA 1340 None 2 0 0 FALSE 0 0 NA B coding 457 1371 34 1404 PB.5020.1 chr8 - 2677 12 novel_not_in_catalog CCNE2 novel NA NA NA NA no_subtype FALSE canonical NA NA 34 None 5 11 0 TRUE 0 0 NA A coding 404 1212 59 1270 PB.6907.1 chr12 - 3150 1 genic_intron novelGene_403 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 16 0 FALSE 0 0 NA A coding 8 24 361 384 PB.6112.1 chr11 + 5265 20 novel_not_in_catalog PHRF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 5096 None 2 10 2 TRUE 0 0 NA B coding 909 2727 131 2857 PB.1442.2 chr2 + 3040 14 novel_not_in_catalog ELMOD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2054 None 4 10 1 FALSE 0 0 NA B coding 381 1143 1112 2254 PB.9793.1 chr19 - 1337 9 full-splice_match DHPS ENST00000210060.11 1363 9 23 3 no_subtype FALSE canonical NA NA 320 None 9 3 0 FALSE 0 0 NA A coding 369 1107 114 1220 PB.1442.1 chr2 + 1401 2 novel_in_catalog ELMOD3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 79 None 7 5 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10203.1 chr19 + 2957 5 novel_not_in_catalog ERVK3-1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2413 None 5 15 1 TRUE 0 0 NA A coding 150 450 231 680 PB.11054.2 chrX + 1808 1 novel_in_catalog P2RY10 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7191.1 chr12 - 1522 7 novel_not_in_catalog ARL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 116 None 133 11 1 TRUE 0 0 NA A coding 181 543 113 655 PB.9032.6 chr17 - 1470 9 novel_not_in_catalog CRLF3 novel NA NA NA NA no_subtype FALSE canonical NA NA 222 None 5 2 1 TRUE 0 0 NA C coding 438 1314 106 1419 PB.9032.5 chr17 - 2745 8 novel_not_in_catalog CRLF3 novel NA NA NA NA no_subtype FALSE canonical NA NA 53 None 2 16 0 FALSE 0 0 NA C coding 326 978 273 1250 PB.6112.2 chr11 + 5680 20 novel_not_in_catalog PHRF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 5511 None 2 14 4 TRUE 0 0 NA B coding 903 2709 130 2838 PB.9032.3 chr17 - 1491 8 full-splice_match CRLF3 ENST00000324238.6 2957 8 32 1434 no_subtype FALSE canonical NA NA 222 None 162 2 0 FALSE 0 0 NA C coding 438 1314 106 1419 PB.9032.1 chr17 - 2947 9 novel_not_in_catalog CRLF3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 235 None 5 20 0 TRUE 0 0 NA C coding 438 1314 119 1432 PB.7955.1 chr14 - 3380 18 full-splice_match BRF1 ENST00000547530.6 3358 18 -31 9 no_subtype FALSE canonical NA NA 274 None 5 13 0 FALSE 0 0 NA A coding 677 2031 91 2121 PB.10382.1 chr20 - 1382 1 full-splice_match MAFB ENST00000373313.2 3393 1 890 1121 no_subtype FALSE canonical NA NA NA None 8 9 0 FALSE 0 0 NA A coding 105 315 155 469 PB.2513.4 chr3 - 2521 1 genic_intron novelGene_1208 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 15 0 FALSE 0 0 NA A coding 104 312 1402 1713 PB.3246.2 chr5 + 3636 29 novel_not_in_catalog ITGA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3614 None 8 4 2 FALSE 0 0 NA B coding 768 2304 116 2419 PB.3246.3 chr5 + 1584 2 incomplete-splice_match PELO ENST00000274311.2 4349 3 736 2029 internal_fragment FALSE canonical NA NA 975 None 7 1 0 FALSE 0 0 NA A coding 385 1155 250 1404 PB.8718.3 chr16 - 2891 3 novel_not_in_catalog ST3GAL2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 59 None 4 13 0 TRUE 0 0 NA C coding 100 300 2342 2641 PB.3246.1 chr5 + 3800 1 novel_in_catalog ITGA1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4579.1 chr7 + 3216 13 full-splice_match PMPCB ENST00000249269.8 2472 13 31 -775 no_subtype TRUE canonical NA NA 1412 None 62 18 0 FALSE 0 0 NA A coding 489 1467 8 1474 PB.6557.1 chr11 - 1659 2 full-splice_match KCTD14 ENST00000353172.5 1691 2 26 6 no_subtype FALSE canonical NA NA 109 None 32 4 0 FALSE 0 0 NA A coding 255 765 20 784 PB.5381.1 chr9 + 3497 5 novel_not_in_catalog ZNF169 novel NA NA NA NA no_subtype FALSE canonical NA NA 315 None 8 8 0 FALSE 0 0 NA A coding 604 1812 57 1868 PB.7739.1 chr14 + 3518 9 novel_in_catalog PCNX4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2675 None 4 10 0 FALSE 0 0 NA A coding 938 2814 111 2924 PB.509.1 chr1 + 1664 1 novel_in_catalog AGL novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5600.1 chr9 - 3781 4 full-splice_match MED22 ENST00000457204.2 561 4 71 -3291 no_subtype FALSE canonical NA NA 119 None 44 17 0 FALSE 0 0 NA A coding 140 420 158 577 PB.6318.1 chr11 + 884 8 novel_not_in_catalog NDUFS3 novel NA NA NA NA no_subtype FALSE canonical NA NA 637 None 5 0 0 TRUE 0 0 NA A coding 264 792 11 802 PB.4947.7 chr8 - 2701 14 novel_not_in_catalog ASPH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 213 None 2 27 2 TRUE 0 0 NA B coding 281 843 146 988 PB.7584.1 chr13 + 2517 12 novel_not_in_catalog TFDP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1170 None 2 6 0 FALSE 0 0 NA A coding 406 1218 98 1315 PB.10104.1 chr19 + 2515 17 full-splice_match ALDH16A1 ENST00000293350.8 3153 17 141 497 no_subtype FALSE canonical NA NA 2269 None 46 5 0 FALSE 0 0 NA C coding 802 2406 23 2428 PB.4419.1 chr7 + 2957 1 genic_intron novelGene_493 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A coding 171 513 2236 2748 PB.4947.6 chr8 - 2894 16 novel_not_in_catalog ASPH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 293 None 4 13 3 TRUE 0 0 NA B coding 265 795 365 1159 PB.2732.1 chr4 + 1448 3 full-splice_match MRFAP1 ENST00000320912.8 2049 3 603 -2 no_subtype FALSE canonical NA NA 446 None 76 8 0 FALSE 0 0 NA C coding 127 381 51 431 PB.9344.1 chr17 + 3999 5 novel_in_catalog GPRC5C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1680 None 8 15 0 FALSE 0 0 NA A coding 542 1626 85 1710 PB.2732.2 chr4 + 1565 2 full-splice_match MRFAP1 ENST00000382581.4 1584 2 3 16 no_subtype FALSE canonical NA NA 565 None 22 8 0 FALSE 0 0 NA C coding 127 381 170 550 PB.8718.2 chr16 - 3696 7 full-splice_match ST3GAL2 ENST00000342907.2 4450 7 -25 779 no_subtype FALSE canonical NA NA 165 None 21 25 0 FALSE 0 0 NA C coding 350 1050 1169 2218 PB.4419.3 chr7 + 1803 1 genic_intron novelGene_496 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6124.2 chr11 + 3004 21 novel_not_in_catalog AP2A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2623 None 2 6 2 TRUE 0 0 NA B coding 868 2604 95 2698 PB.6124.1 chr11 + 4596 23 novel_not_in_catalog AP2A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2907 None 39 12 2 TRUE 0 0 NA B coding 944 2832 151 2982 PB.1551.1 chr2 - 3216 9 full-splice_match CKAP2L ENST00000302450.10 4533 9 51 1266 no_subtype FALSE canonical NA NA 65 None 3 14 0 FALSE 0 0 NA A coding 745 2235 29 2263 PB.213.4 chr1 + 1529 3 genic_intron novelGene_298 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1228 None 2 14 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.6927.1 chr12 + 1816 2 incomplete-splice_match PCED1B ENST00000546455.5 2328 4 505 7 internal_fragment FALSE canonical NA NA 169 None 2 3 0 FALSE 0 0 NA B coding 432 1296 227 1522 PB.2610.2 chr3 + 2841 12 full-splice_match TTC14 ENST00000296015.8 2881 12 33 7 no_subtype FALSE canonical NA NA 1499 None 6 8 0 FALSE 0 0 NA C coding 770 2310 100 2409 PB.503.2 chr1 + 3055 14 full-splice_match PTBP2 ENST00000609116.5 12014 14 7 8952 no_subtype FALSE canonical NA NA 1541 None 6 5 1 FALSE 0 0 NA A coding 532 1596 76 1671 PB.8586.1 chr16 - 1509 1 intergenic novelGene_312 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9783.1 chr19 - 1006 4 full-splice_match ELOF1 ENST00000252445.7 1019 4 6 7 no_subtype FALSE canonical NA NA 40 None 3 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4802.1 chr8 + 1368 1 full-splice_match C8orf48 ENST00000297324.4 1445 1 60 17 no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA A coding 319 957 90 1046 PB.5080.1 chr8 - 2857 2 genic_intron novelGene_1040 novel NA NA NA NA no_subtype FALSE canonical NA NA 475 None 4 25 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8219.1 chr15 - 1088 1 full-splice_match IMP3 ENST00000403490.2 1237 1 122 27 no_subtype FALSE canonical NA NA NA None 14 1 0 FALSE 0 0 NA A coding 184 552 34 585 PB.9779.3 chr19 + 2602 10 novel_in_catalog PLPPR2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1257 None 4 2 0 FALSE 0 0 NA C coding 318 954 334 1287 PB.9779.2 chr19 + 2692 10 novel_in_catalog PLPPR2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1347 None 9 2 0 FALSE 0 0 NA C coding 452 1356 333 1688 PB.9779.1 chr19 + 2690 10 full-splice_match PLPPR2 ENST00000251473.9 2727 10 30 7 no_subtype FALSE canonical NA NA 1345 None 12 2 0 FALSE 0 0 NA C coding 343 1029 347 1375 PB.7664.1 chr14 + 3338 3 antisense novelGene_RPL7AP3_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 579 None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5922.4 chr10 + 2729 1 genic_intron novelGene_852 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 14 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5574.1 chr9 - 2804 2 genic_intron novelGene_1125 novel NA NA NA NA no_subtype TRUE canonical NA NA 1934 None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7576.1 chr13 + 5662 21 novel_not_in_catalog ARHGEF7 novel NA NA NA NA no_subtype FALSE canonical NA NA 2926 None 2 19 1 TRUE 0 0 NA B coding 387 1161 1886 3046 PB.4566.6 chr7 + 3544 2 novel_not_in_catalog MUC12 novel NA NA NA NA no_subtype FALSE canonical NA NA 1987 None 2 13 1 TRUE 0 0 NA B coding 122 366 59 424 PB.11099.1 chrX + 2790 7 full-splice_match RNF128 ENST00000255499.2 2817 7 18 9 no_subtype FALSE canonical NA NA 1385 None 54 7 0 FALSE 0 0 NA A coding 428 1284 233 1516 PB.9004.2 chr17 + 2873 15 novel_not_in_catalog NEK8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2683 None 2 6 1 TRUE 0 0 NA B coding 250 750 28 777 PB.9004.3 chr17 + 2952 14 novel_not_in_catalog NEK8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2762 None 3 7 2 TRUE 0 0 NA B coding 250 750 25 774 PB.9004.4 chr17 + 3473 12 novel_not_in_catalog NEK8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3284 None 2 14 2 TRUE 0 0 NA B coding 250 750 28 777 PB.9004.5 chr17 + 2991 16 novel_not_in_catalog NEK8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2801 None 2 12 1 TRUE 0 0 NA B coding 431 1293 1206 2498 PB.9004.6 chr17 + 2721 15 novel_not_in_catalog NEK8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2529 None 2 8 1 TRUE 0 0 NA B coding 350 1050 27 1076 PB.9004.7 chr17 + 2633 16 novel_not_in_catalog NEK8 novel NA NA NA NA no_subtype TRUE canonical NA NA 2455 None 2 8 1 TRUE 0 0 NA B coding 460 1380 24 1403 PB.3598.1 chr5 + 4115 2 incomplete-splice_match MFAP3 ENST00000322602.9 2891 3 316 -1540 internal_fragment FALSE canonical NA NA 461 None 2 18 0 FALSE 0 0 NA A coding 362 1086 167 1252 PB.4951.1 chr8 + 2654 8 full-splice_match MTFR1 ENST00000262146.8 2640 8 -11 -3 no_subtype FALSE canonical NA NA 1070 None 7 13 0 FALSE 0 0 NA C coding 314 942 195 1136 PB.4951.2 chr8 + 1838 7 novel_in_catalog MTFR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1015 None 2 4 0 FALSE 0 0 NA C coding 314 942 140 1081 PB.5441.1 chr9 - 2499 1 incomplete-splice_match PTBP3 ENST00000374257.5 7240 14 2195 2547 no_subtype FALSE canonical NA NA NA None 10 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7959.21 chr14 - 1481 10 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 83 None 2 18 6 TRUE 0 0 NA B coding 251 753 678 1430 PB.7853.2 chr14 + 2070 16 full-splice_match TDP1 ENST00000393454.6 2068 16 -10 8 no_subtype FALSE canonical NA NA 1803 None 3 6 0 FALSE 0 0 NA C coding 608 1824 51 1874 PB.5002.2 chr8 - 2615 11 novel_not_in_catalog RMDN1 novel NA NA NA NA no_subtype TRUE canonical NA NA 162 None 4 22 0 TRUE 0 0 NA B coding 314 942 34 975 PB.7815.3 chr14 + 6455 21 full-splice_match YLPM1 ENST00000325680.11 7108 21 560 93 no_subtype FALSE canonical NA NA 6041 None 3 1 0 FALSE 0 0 NA C coding 1989 5967 36 6002 PB.9719.1 chr19 + 2029 14 full-splice_match MCOLN1 ENST00000264079.10 2082 14 51 2 no_subtype FALSE canonical NA NA 1780 None 4 1 0 FALSE 0 0 NA A coding 580 1740 75 1814 PB.7352.4 chr12 - 2508 19 novel_not_in_catalog SBNO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 161 None 14 0 0 TRUE 0 0 NA B coding 782 2346 162 2507 PB.2977.1 chr4 - 1507 1 incomplete-splice_match PPP3CA ENST00000394853.8 3604 13 2092 6 no_subtype FALSE canonical NA NA NA None 7 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6748.1 chr11 - 3482 25 novel_not_in_catalog NCAPD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 23 None 2 8 0 TRUE 0 0 NA B coding 956 2868 125 2992 PB.9164.1 chr17 + 1898 3 full-splice_match TMUB2 ENST00000357984.7 1921 3 17 6 no_subtype FALSE canonical NA NA 674 None 9 5 0 FALSE 0 0 NA A coding 301 903 133 1035 PB.10277.1 chr20 + 2914 1 genic_intron novelGene_106 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 17 0 FALSE 0 0 NA A coding 66 198 192 389 PB.417.1 chr1 + 1365 2 genic LEPROT novel NA NA NA NA no_subtype FALSE canonical NA NA 1018 None 13 7 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.1686.1 chr2 + 2397 10 full-splice_match GORASP2 ENST00000234160.4 3173 10 767 9 no_subtype FALSE canonical NA NA 1066 None 10 9 0 FALSE 0 0 NA A coding 452 1356 49 1404 PB.1837.1 chr2 + 2735 2 genic_intron novelGene_1396 novel NA NA NA NA no_subtype FALSE canonical NA NA 1961 None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6736.1 chr11 - 2685 1 genic_intron novelGene_1116 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1037.1 chr1 - 3599 21 novel_not_in_catalog INTS7 novel NA NA NA NA no_subtype FALSE canonical NA NA 194 None 2 9 0 TRUE 0 0 NA C coding 962 2886 101 2986 PB.2988.1 chr4 + 2637 5 novel_not_in_catalog TET2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1191 None 2 2 1 TRUE 0 0 NA B coding 436 1308 1330 2637 PB.1722.1 chr2 + 2827 1 novel_in_catalog PLEKHA3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5804.5 chr10 - 3231 2 genic_intron novelGene_640 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1921 None 6 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.659.2 chr1 - 1186 4 full-splice_match ENSA ENST00000369014.9 2085 4 1 898 no_subtype FALSE canonical NA NA 182 None 2 2 0 FALSE 0 0 NA C coding 121 363 126 488 PB.4786.1 chr8 + 2920 3 antisense novelGene_RP11-211C9.1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1787 None 2 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2623.1 chr3 - 5829 30 full-splice_match ABCC5 ENST00000334444.10 5921 30 86 6 no_subtype TRUE canonical NA NA 100 None 10 1 0 FALSE 0 0 NA A coding 1437 4311 156 4466 PB.7163.1 chr12 + 6470 33 novel_not_in_catalog PLXNC1 novel NA NA NA NA no_subtype TRUE canonical NA NA 3986 None 10 17 0 TRUE 0 0 NA B coding 1305 3915 174 4088 PB.1869.1 chr2 - 2886 19 full-splice_match ABCB6 ENST00000265316.7 3016 19 120 10 no_subtype TRUE canonical NA NA 746 None 29 3 0 FALSE 0 0 NA A coding 842 2526 198 2723 PB.2171.1 chr3 + 1692 2 full-splice_match TREX1 ENST00000629913.1 1426 2 402 -668 no_subtype FALSE canonical NA NA 53 None 8 11 0 FALSE 0 0 NA A coding 314 942 80 1021 PB.7986.1 chr15 - 1865 14 full-splice_match LPCAT4 ENST00000314891.10 2262 14 82 315 no_subtype FALSE canonical NA NA 210 None 10 5 0 FALSE 0 0 NA A coding 524 1572 97 1668 PB.4277.1 chr7 + 1668 1 incomplete-splice_match FOXK1 ENST00000328914.4 11181 9 9506 8 no_subtype FALSE canonical NA NA NA None 4 14 0 FALSE 0 0 NA A coding 148 444 718 1161 PB.624.1 chr1 - 1566 5 novel_not_in_catalog PEX11B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 70 None 20 4 1 TRUE 0 0 NA A coding 259 777 15 791 PB.2644.1 chr3 - 3513 17 novel_not_in_catalog IGF2BP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 236 None 4 21 0 TRUE 0 0 NA B coding 556 1668 59 1726 PB.3496.1 chr5 - 1676 4 full-splice_match CXCL14 ENST00000512158.5 1760 4 69 15 no_subtype FALSE canonical NA NA 281 None 22 2 0 FALSE 0 0 NA A coding 111 333 182 514 PB.7163.7 chr12 + 2832 1 novel_in_catalog PLXNC1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 26 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7316.2 chr12 + 2789 1 full-splice_match UNC119B ENST00000578311.1 74 1 -2343 -372 no_subtype FALSE canonical NA NA NA None 3 13 0 FALSE 0 0 NA C coding 171 513 658 1170 PB.1704.3 chr2 + 2523 9 full-splice_match CDCA7 ENST00000347703.7 2500 9 62 -85 no_subtype FALSE canonical NA NA 1167 None 2 6 0 FALSE 0 0 NA C coding 371 1113 83 1195 PB.3143.2 chr4 - 1476 4 novel_not_in_catalog IRF2 novel NA NA NA NA no_subtype TRUE canonical NA NA 95 None 2 3 1 TRUE 0 0 NA C coding 134 402 47 448 PB.3143.4 chr4 - 5523 3 genic_intron novelGene_1345 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 154 None 25 32 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1392.8 chr2 + 2604 12 novel_not_in_catalog ARHGAP25 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1775 None 2 9 1 TRUE 0 0 NA B coding 620 1860 121 1980 PB.1392.9 chr2 + 2524 11 novel_not_in_catalog ARHGAP25 novel NA NA NA NA no_subtype FALSE canonical NA NA 1682 None 161 2 0 TRUE 0 0 NA B coding 620 1860 28 1887 PB.1392.6 chr2 + 2660 12 novel_not_in_catalog ARHGAP25 novel NA NA NA NA no_subtype FALSE canonical NA NA 1831 None 2 2 0 TRUE 0 0 NA B coding 620 1860 177 2036 PB.1392.7 chr2 + 2847 1 genic_intron novelGene_648 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1392.4 chr2 + 2532 11 novel_not_in_catalog ARHGAP25 novel NA NA NA NA no_subtype FALSE canonical NA NA 1697 None 3 3 1 TRUE 0 0 NA B coding 607 1821 82 1902 PB.4939.1 chr8 - 2474 1 antisense novelGene_SDCBP_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6872.2 chr12 - 1348 5 novel_in_catalog KRAS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 171 None 5 6 0 FALSE 0 0 NA C coding 188 564 183 746 PB.8890.1 chr17 - 902 4 full-splice_match GABARAP ENST00000302386.9 1634 4 318 414 no_subtype FALSE canonical NA NA 212 None 39 3 0 FALSE 0 0 NA A coding 117 351 123 473 PB.2294.2 chr3 - 2090 17 full-splice_match UBA3 ENST00000349511.8 2112 17 19 3 no_subtype FALSE canonical NA NA 56 None 4 4 0 FALSE 0 0 NA C coding 449 1347 37 1383 PB.6872.1 chr12 - 1364 5 full-splice_match KRAS ENST00000311936.7 5765 5 -5 4406 no_subtype FALSE canonical NA NA 186 None 6 5 0 FALSE 0 0 NA C coding 188 564 198 761 PB.3904.2 chr6 - 1560 6 full-splice_match OARD1 ENST00000479950.5 3330 6 230 1540 no_subtype FALSE canonical NA NA 43 None 2 5 0 FALSE 0 0 NA C coding 152 456 85 540 PB.3904.1 chr6 - 1607 6 full-splice_match OARD1 ENST00000424266.6 1337 6 214 -484 no_subtype FALSE canonical NA NA 89 None 9 6 0 FALSE 0 0 NA C coding 152 456 131 586 PB.7619.1 chr14 - 3703 11 full-splice_match SLC7A8 ENST00000316902.11 4216 11 503 10 no_subtype FALSE canonical NA NA 374 None 3 12 0 FALSE 0 0 NA A coding 535 1605 224 1828 PB.9265.1 chr17 - 1657 13 novel_not_in_catalog SEPT4 novel NA NA NA NA no_subtype FALSE canonical NA NA 112 None 2 0 0 TRUE 0 0 NA A coding 459 1377 110 1486 PB.6441.3 chr11 + 2001 13 full-splice_match KAT5 ENST00000341318.8 2296 13 295 0 no_subtype FALSE canonical NA NA 1445 None 3 6 0 FALSE 0 0 NA C coding 302 906 672 1577 PB.3397.1 chr5 - 5823 2 genic_intron novelGene_919 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3674 None 16 31 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3160.1 chr5 + 2717 13 full-splice_match EXOC3 ENST00000512944.5 2825 13 95 13 no_subtype FALSE canonical NA NA 2160 None 113 1 0 FALSE 0 0 NA C coding 745 2235 95 2329 PB.3160.3 chr5 + 3041 14 novel_not_in_catalog EXOC3 novel NA NA NA NA no_subtype TRUE canonical NA NA 2862 None 2 4 0 TRUE 0 0 NA C coding 745 2235 95 2329 PB.3160.2 chr5 + 2676 13 novel_not_in_catalog EXOC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2112 None 2 5 0 FALSE 0 0 NA C coding 729 2187 95 2281 PB.7994.1 chr15 - 746 5 full-splice_match SRP14 ENST00000267884.10 1077 5 24 307 no_subtype FALSE canonical NA NA 72 None 8 4 0 FALSE 0 0 NA C coding 136 408 49 456 PB.7994.2 chr15 - 2885 3 novel_not_in_catalog SRP14 novel NA NA NA NA no_subtype FALSE canonical NA NA 69 None 4 29 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.386.1 chr1 - 6259 2 genic_intron novelGene_531 novel NA NA NA NA no_subtype FALSE canonical NA NA 2241 None 3 32 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5596.1 chr9 + 1404 1 full-splice_match EEF1A1P5 ENST00000436459.2 1389 1 267 -282 no_subtype FALSE canonical NA NA NA None 2 0 0 FALSE 0 0 NA A coding 361 1083 37 1119 PB.10923.3 chrX + 5503 14 novel_not_in_catalog DDX3X novel NA NA NA NA no_subtype FALSE canonical NA NA 2336 None 4 18 2 TRUE 0 0 NA C coding 404 1212 1112 2323 PB.3180.9 chr5 + 1607 1 incomplete-splice_match MARCH6 ENST00000274140.9 9569 26 4886 3077 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2610.3 chr3 + 2778 12 novel_not_in_catalog TTC14 novel NA NA NA NA no_subtype FALSE canonical NA NA 1430 None 2 20 0 FALSE 0 0 NA C coding 760 2280 61 2340 PB.5331.1 chr9 + 2600 2 genic_intron novelGene_716 novel NA NA NA NA no_subtype FALSE canonical NA NA 1218 None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6989.1 chr12 + 1732 5 novel_not_in_catalog SOAT2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1173 None 5 7 0 TRUE 0 0 NA A coding 104 312 118 429 PB.3180.2 chr5 + 2769 22 novel_in_catalog MARCH6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2322 None 4 5 0 FALSE 0 0 NA B coding 772 2316 175 2490 PB.3180.1 chr5 + 3026 25 novel_in_catalog MARCH6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2625 None 85 1 0 FALSE 0 0 NA B coding 842 2526 188 2713 PB.4203.1 chr6 + 2978 2 full-splice_match MYCT1 ENST00000367245.5 3030 2 50 2 no_subtype FALSE canonical NA NA 154 None 6 18 0 FALSE 0 0 NA A coding 187 561 103 663 PB.7605.1 chr14 - 3175 3 novel_not_in_catalog CHD8 novel NA NA NA NA no_subtype TRUE canonical NA NA 2905 None 2 23 1 TRUE 0 0 NA B coding 63 189 247 435 PB.3180.6 chr5 + 3469 25 novel_in_catalog MARCH6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2625 None 5 3 0 FALSE 0 0 NA B coding 842 2526 188 2713 PB.3180.5 chr5 + 2752 1 genic_intron novelGene_72 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3180.4 chr5 + 6438 27 novel_not_in_catalog MARCH6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4825 None 2 29 1 TRUE 0 0 NA B coding 910 2730 153 2882 PB.6225.4 chr11 + 1827 15 novel_in_catalog NUCB2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1688 None 2 4 0 FALSE 0 0 NA C coding 420 1260 434 1693 PB.6225.1 chr11 + 1031 8 novel_in_catalog NUCB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 929 None 2 2 0 FALSE 0 0 NA C coding 195 585 447 1031 PB.6225.2 chr11 + 1780 15 novel_in_catalog NUCB2 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 1670 None 8 3 0 FALSE 0 0 NA C coding 420 1260 416 1675 PB.6225.3 chr11 + 1600 14 full-splice_match NUCB2 ENST00000529010.5 2274 14 -16 690 no_subtype FALSE canonical NA NA 1490 None 2 1 0 FALSE 0 0 NA C coding 420 1260 236 1495 PB.9364.1 chr17 - 1527 7 full-splice_match SLC25A19 ENST00000442286.6 1496 7 -25 -6 no_subtype FALSE canonical NA NA 62 None 4 4 0 FALSE 0 0 NA A coding 320 960 101 1060 PB.4336.2 chr7 + 2906 5 novel_in_catalog CBX3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1634 None 2 13 0 FALSE 0 0 NA C coding 183 549 1210 1758 PB.4336.1 chr7 + 1804 6 full-splice_match CBX3 ENST00000396386.6 1857 6 56 -3 no_subtype FALSE canonical NA NA 531 None 18 9 0 FALSE 0 0 NA C coding 183 549 107 655 PB.2843.5 chr4 + 1621 16 novel_not_in_catalog FIP1L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1569 None 2 1 0 TRUE 0 0 NA C coding 489 1467 155 1621 PB.6613.1 chr11 - 1811 10 full-splice_match MMP12 ENST00000571244.2 1874 10 51 12 no_subtype FALSE canonical NA NA 148 None 27 1 0 FALSE 0 0 NA A coding 470 1410 47 1456 PB.8564.1 chr16 + 1515 11 novel_not_in_catalog PHKG2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 974 None 4 3 2 TRUE 0 0 NA C coding 406 1218 48 1265 PB.9816.1 chr19 + 3517 29 novel_not_in_catalog CC2D1A novel NA NA NA NA no_subtype TRUE canonical NA NA 3019 None 20 1 0 FALSE 0 0 NA B coding 947 2841 197 3037 PB.7333.1 chr12 - 1757 2 novel_not_in_catalog LINC01089 novel NA NA NA NA no_subtype FALSE canonical NA NA 559 None 11 17 1 TRUE 0 0 NA A coding 173 519 697 1215 PB.5952.3 chr10 - 3475 31 full-splice_match MMS19 ENST00000438925.6 3797 31 317 5 no_subtype FALSE canonical NA NA 131 None 18 3 0 FALSE 0 0 NA A coding 1030 3090 20 3109 PB.9486.1 chr18 + 1736 1 novel_in_catalog APCDD1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5353.13 chr9 - 5755 27 novel_not_in_catalog ZCCHC6 novel NA NA NA NA no_subtype FALSE canonical NA NA 297 None 3 5 0 FALSE 0 0 NA C coding 1495 4485 329 4813 PB.5353.12 chr9 - 5714 28 novel_not_in_catalog ZCCHC6 novel NA NA NA NA no_subtype FALSE canonical NA NA 108 None 11 4 0 FALSE 0 0 NA C coding 784 2352 2436 4787 PB.5353.11 chr9 - 5655 29 novel_not_in_catalog ZCCHC6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 140 None 3 8 3 TRUE 0 0 NA C coding 1475 4425 172 4596 PB.5353.10 chr9 - 6559 1 novel_in_catalog ZCCHC6 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 49 0 FALSE 0 0 NA C coding 113 339 2727 3065 PB.11105.2 chrX - 2741 1 incomplete-splice_match ACSL4 ENST00000348502.10 5032 16 2288 4 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5353.16 chr9 - 2915 1 novel_in_catalog ZCCHC6 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5353.15 chr9 - 5914 29 novel_not_in_catalog ZCCHC6 novel NA NA NA NA no_subtype FALSE canonical NA NA 230 None 2 7 0 FALSE 0 0 NA C coding 767 2301 2558 4858 PB.7092.3 chr12 + 2771 6 novel_not_in_catalog MSRB3 novel NA NA NA NA no_subtype TRUE canonical NA NA 1975 None 3 14 0 TRUE 0 0 NA C coding 106 318 192 509 PB.7092.2 chr12 + 1853 7 full-splice_match MSRB3 ENST00000308259.9 4417 7 84 2480 no_subtype FALSE canonical NA NA 580 None 12 6 0 FALSE 0 0 NA C coding 185 555 191 745 PB.7092.1 chr12 + 1726 6 full-splice_match MSRB3 ENST00000355192.7 4289 6 84 2479 no_subtype FALSE canonical NA NA 453 None 5 7 0 FALSE 0 0 NA C coding 192 576 43 618 PB.10564.1 chr21 - 2843 9 full-splice_match ERG ENST00000398905.5 4806 9 -41 2004 no_subtype FALSE canonical NA NA 121 None 5 2 0 FALSE 0 0 NA A coding 455 1365 104 1468 PB.7092.5 chr12 - 3056 1 genic RP11-230G5.2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A coding 101 303 834 1136 PB.7092.4 chr12 + 1914 2 antisense novelGene_RP11-230G5.2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1525 None 12 8 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5131.1 chr8 - 1596 1 novel_in_catalog SLA novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 10 6 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2027.1 chr3 + 3726 21 full-splice_match CAPN7 ENST00000253693.6 4353 21 6 621 no_subtype TRUE canonical NA NA 2544 None 17 8 0 FALSE 0 0 NA C coding 769 2307 380 2686 PB.10267.1 chr20 - 3415 16 novel_not_in_catalog FERMT1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 262 None 4 7 1 TRUE 0 0 NA A coding 677 2031 284 2314 PB.1267.1 chr2 + 3158 23 novel_not_in_catalog LTBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3014 None 6 4 0 TRUE 0 0 NA B coding 1007 3021 137 3157 PB.7267.1 chr12 + 2861 13 novel_not_in_catalog TRAFD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1997 None 18 1 0 TRUE 0 0 NA B coding 582 1746 306 2051 PB.2690.16 chr3 + 2891 4 novel_not_in_catalog PAK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2642 None 2 32 3 TRUE 0 0 NA B non_coding NA NA NA NA PB.7824.1 chr14 + 2615 1 genic_intron novelGene_706 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9668.2 chr19 + 1481 9 novel_in_catalog NFIC novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1294 None 4 0 0 FALSE 0 0 NA C coding 419 1257 53 1309 PB.2690.10 chr3 + 5786 17 novel_not_in_catalog PAK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5538 None 2 49 2 TRUE 0 0 NA B coding 524 1572 188 1759 PB.1360.1 chr2 + 1463 9 full-splice_match AHSA2 ENST00000489653.5 1197 9 -33 -233 no_subtype FALSE canonical NA NA 933 None 12 11 1 FALSE 0 0 NA A coding 198 594 507 1100 PB.8037.1 chr15 - 2334 14 novel_not_in_catalog EPB42 novel NA NA NA NA no_subtype FALSE canonical NA NA 196 None 6 3 1 TRUE 0 0 NA A coding 691 2073 187 2259 PB.1466.2 chr2 - 1452 7 novel_not_in_catalog CD8B novel NA NA NA NA no_subtype FALSE canonical NA NA 154 None 2 10 0 TRUE 0 0 NA B coding 210 630 112 741 PB.9705.2 chr19 - 3879 8 incomplete-splice_match MLLT1 ENST00000252674.8 4507 12 615 13 5prime_fragment FALSE canonical NA NA 95 None 9 14 0 FALSE 0 0 NA A coding 400 1200 27 1226 PB.3954.1 chr6 + 4435 4 full-splice_match ENPP4 ENST00000321037.4 4651 4 173 43 no_subtype FALSE canonical NA NA 1054 None 4 24 0 FALSE 0 0 NA A coding 453 1359 58 1416 PB.5826.1 chr10 - 1911 3 full-splice_match PRF1 ENST00000373209.2 2492 3 18 563 no_subtype FALSE canonical NA NA 97 None 51 7 0 FALSE 0 0 NA C coding 555 1665 102 1766 PB.4366.1 chr7 - 3005 3 incomplete-splice_match DPY19L1 ENST00000310974.8 4870 22 1851 14 5prime_fragment FALSE canonical NA NA 39 None 2 12 0 FALSE 0 0 NA A coding 85 255 65 319 PB.2263.1 chr3 - 3057 1 genic_intron novelGene_558 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 13 0 FALSE 0 0 NA A coding 114 342 1324 1665 PB.10995.18 chrX - 1618 9 novel_in_catalog ALAS2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 28 None 4 1 0 FALSE 0 0 NA C coding 478 1434 64 1497 PB.8993.1 chr17 + 3560 7 full-splice_match TNFAIP1 ENST00000226225.6 3627 7 64 3 no_subtype FALSE canonical NA NA 917 None 34 17 0 FALSE 0 0 NA A coding 316 948 204 1151 PB.1295.1 chr2 - 2669 1 genic COX7A2L novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA C coding 105 315 202 516 PB.10995.19 chrX - 1847 11 novel_not_in_catalog ALAS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 28 None 2 1 0 FALSE 0 0 NA C coding 561 1683 44 1726 PB.5287.1 chr9 + 920 1 full-splice_match HRCT1 ENST00000354323.2 950 1 26 4 no_subtype FALSE canonical NA NA NA None 5 5 0 FALSE 0 0 NA A coding 76 228 312 539 PB.6603.1 chr11 - 6225 6 novel_not_in_catalog MAML2 novel NA NA NA NA no_subtype FALSE canonical NA NA 288 None 2 10 0 TRUE 0 0 NA A coding 1156 3468 413 3880 PB.6603.3 chr11 + 3161 2 genic_intron novelGene_870 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2912 None 3 18 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.2673.1 chr3 - 3042 2 full-splice_match MB21D2 ENST00000392452.2 3368 2 280 46 no_subtype FALSE canonical NA NA 252 None 9 12 0 FALSE 0 0 NA A coding 489 1467 48 1514 PB.10925.1 chrX - 1932 1 incomplete-splice_match CASK ENST00000421587.6 8204 25 6266 7 no_subtype FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6603.7 chr11 - 2825 2 genic_intron novelGene_872 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1485 None 32 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.152.2 chr1 + 1373 8 novel_not_in_catalog TMEM50A novel NA NA NA NA no_subtype FALSE canonical NA NA 642 None 8 6 0 TRUE 0 0 NA C coding 157 471 131 601 PB.7491.1 chr13 + 1318 10 full-splice_match PHF11 ENST00000378319.7 1359 10 26 15 no_subtype FALSE canonical NA NA 856 None 9 2 0 FALSE 0 0 NA C coding 331 993 16 1008 PB.7491.2 chr13 + 1541 10 novel_in_catalog PHF11 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1079 None 2 7 0 FALSE 0 0 NA C coding 292 876 356 1231 PB.152.1 chr1 + 2611 7 full-splice_match TMEM50A ENST00000374358.4 2683 7 391 -319 no_subtype FALSE canonical NA NA 590 None 2 11 0 FALSE 0 0 NA C coding 157 471 163 633 PB.10008.1 chr19 - 1363 2 genic_intron novelGene_414 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 28 None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6261.1 chr11 + 1528 2 genic_intron novelGene_328 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 25 None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5752.2 chr10 - 3655 5 full-splice_match ZNF33B ENST00000359467.7 5958 5 -56 2359 no_subtype FALSE canonical NA NA 127 None 4 20 0 FALSE 0 0 NA C coding 778 2334 172 2505 PB.6184.1 chr11 + 3786 8 full-splice_match EIF3F ENST00000309828.4 1254 8 17 -2549 no_subtype FALSE canonical NA NA 1012 None 3 20 0 FALSE 0 0 NA A coding 357 1071 17 1087 PB.5752.1 chr10 - 4145 5 novel_not_in_catalog ZNF33B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 82 None 2 33 1 TRUE 0 0 NA C coding 798 2394 68 2461 PB.1996.1 chr3 - 2951 2 antisense novelGene_VHL_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2059 None 2 24 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6445.1 chr11 - 1093 4 full-splice_match CFL1 ENST00000308162.9 1234 4 138 3 no_subtype FALSE canonical NA NA 99 None 75 3 0 FALSE 0 0 NA C coding 166 498 97 594 PB.9988.1 chr19 + 1335 11 full-splice_match TIMM50 ENST00000607714.5 1338 11 17 -14 no_subtype FALSE canonical NA NA 965 None 17 1 0 FALSE 0 0 NA A coding 353 1059 6 1064 PB.2760.1 chr4 - 1236 7 full-splice_match QDPR ENST00000281243.9 1648 7 121 291 no_subtype FALSE canonical NA NA 164 None 33 2 0 FALSE 0 0 NA A coding 244 732 60 791 PB.5263.1 chr9 + 1868 2 novel_not_in_catalog UBE2R2 novel NA NA NA NA no_subtype FALSE canonical NA NA 464 None 3 22 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.2835.4 chr4 - 2866 1 novel_in_catalog TXK novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10189.2 chr19 + 2685 4 full-splice_match ZNF17 ENST00000307658.11 2716 4 9 22 no_subtype FALSE canonical NA NA 402 None 5 5 1 FALSE 0 0 NA C coding 664 1992 255 2246 PB.7288.1 chr12 - 2017 1 genic_intron novelGene_1028 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9403.7 chr17 - 2758 20 novel_not_in_catalog TMC6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 49 None 9 6 2 FALSE 0 0 NA B coding 805 2415 120 2534 PB.600.1 chr1 - 2691 1 genic_intron novelGene_1032 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 18 0 FALSE 0 0 NA A coding 105 315 2080 2394 PB.8459.7 chr16 - 1849 8 incomplete-splice_match MYH11 ENST00000396324.7 6847 42 5026 -28 5prime_fragment FALSE canonical NA NA 36 None 4 7 0 FALSE 0 0 NA C coding 319 957 43 999 PB.5322.1 chr9 - 1808 14 novel_not_in_catalog ALDH1A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 116 None 2 2 0 TRUE 0 0 NA B coding 501 1503 51 1553 PB.5775.3 chr10 + 4609 31 full-splice_match FAM21A ENST00000282633.9 4272 31 17 -354 no_subtype FALSE canonical NA NA 3914 None 5 8 0 FALSE 0 0 NA C coding 1341 4023 29 4051 PB.5775.2 chr10 + 3904 30 incomplete-splice_match FAM21A ENST00000282633.9 4272 31 -35 403 3prime_fragment FALSE canonical NA NA 3788 None 4 3 0 FALSE 0 0 NA C coding 1274 3822 81 3902 PB.5775.1 chr10 + 3668 29 incomplete-splice_match FAM21A ENST00000282633.9 4272 31 17 587 3prime_fragment FALSE canonical NA NA 3115 None 12 3 1 FALSE 0 0 NA C coding 1213 3639 29 3667 PB.10353.2 chr20 - 1669 1 antisense novelGene_RNU4-40P_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 8 0 FALSE 0 0 NA A coding 104 312 833 1144 PB.10353.3 chr20 + 3897 8 incomplete-splice_match PHF20 ENST00000374012.7 5922 18 1690 335 internal_fragment FALSE canonical NA NA 1335 None 2 17 0 FALSE 0 0 NA B coding 424 1272 204 1475 PB.10353.1 chr20 + 1698 11 incomplete-splice_match PHF20 ENST00000374012.7 5922 18 51 4173 3prime_fragment FALSE canonical NA NA 1639 None 30 0 0 FALSE 0 0 NA B coding 540 1620 79 1698 PB.10353.5 chr20 + 2881 4 novel_not_in_catalog PHF20 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2850 None 2 11 0 TRUE 0 0 NA B coding 56 168 327 494 PB.9350.1 chr17 + 1834 7 novel_not_in_catalog SLC9A3R1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1102 None 98 4 0 TRUE 0 0 NA B coding 358 1074 215 1288 PB.9350.2 chr17 + 3158 5 novel_in_catalog SLC9A3R1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2275 None 2 14 0 FALSE 0 0 NA B coding 293 879 218 1096 PB.5496.1 chr9 + 2972 1 genic_intron novelGene_1082 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 32 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6656.3 chr11 + 4405 27 novel_in_catalog SIDT2 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 2969 None 2 12 0 FALSE 0 0 NA C coding 836 2508 522 3029 PB.4077.9 chr6 - 2990 6 novel_not_in_catalog CD164 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 264 None 4 27 2 TRUE 0 0 NA C coding 141 423 90 512 PB.9091.2 chr17 + 5992 14 full-splice_match CDK12 ENST00000447079.4 8336 14 -531 2875 no_subtype FALSE canonical NA NA 4324 None 2 8 1 FALSE 0 0 NA C coding 1490 4470 565 5034 PB.9091.3 chr17 + 6218 16 novel_not_in_catalog CDK12 novel NA NA NA NA no_subtype TRUE canonical NA NA 4971 None 2 39 1 TRUE 0 0 NA C coding 413 1239 337 1575 PB.3294.1 chr5 + 1583 2 full-splice_match CTC-534A2.2 ENST00000510585.2 1766 2 -5 188 no_subtype FALSE canonical NA NA 347 None 2 6 0 FALSE 0 0 NA A coding 250 750 468 1217 PB.9091.1 chr17 + 5984 15 novel_not_in_catalog CDK12 novel NA NA NA NA no_subtype TRUE canonical NA NA 4348 None 2 10 0 TRUE 0 0 NA C coding 1480 4440 587 5026 PB.1355.1 chr2 + 3748 22 full-splice_match PAPOLG ENST00000238714.7 4263 22 12 503 no_subtype TRUE canonical NA NA 2349 None 7 15 0 FALSE 0 0 NA A coding 736 2208 238 2445 PB.5769.5 chr10 + 6634 37 novel_not_in_catalog WDFY4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5704 None 2 8 2 TRUE 0 0 NA B coding 1754 5262 153 5414 PB.1607.3 chr2 + 3009 7 novel_not_in_catalog UBXN4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1636 None 2 19 1 TRUE 0 0 NA B coding 274 822 49 870 PB.5769.7 chr10 + 6972 48 novel_not_in_catalog WDFY4 novel NA NA NA NA no_subtype FALSE canonical NA NA 6526 None 3 4 0 TRUE 0 0 NA B coding 2180 6540 51 6590 PB.5769.1 chr10 + 1442 1 genic WDFY4 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5769.3 chr10 + 7240 38 novel_not_in_catalog WDFY4 novel NA NA NA NA no_subtype TRUE canonical NA NA 6223 None 3 16 2 TRUE 0 0 NA B coding 1388 4164 312 4475 PB.5297.1 chr9 + 3421 1 genic_intron novelGene_359 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.817.2 chr1 - 3317 1 antisense novelGene_UHMK1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5560.3 chr9 - 2840 15 novel_in_catalog CRAT novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 246 None 5 9 0 FALSE 0 0 NA C coding 627 1881 358 2238 PB.4077.5 chr6 - 2860 7 novel_not_in_catalog CD164 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 123 None 2 33 2 TRUE 0 0 NA C coding 151 453 75 527 PB.9824.52 chr19 + 1356 7 incomplete-splice_match ADGRE5 ENST00000357355.7 3054 19 1688 10 internal_fragment FALSE canonical NA NA 732 None 6 4 0 FALSE 0 0 NA C coding 206 618 142 759 PB.8672.1 chr16 - 1965 12 novel_in_catalog ZDHHC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 294 None 5 4 0 FALSE 0 0 NA A coding 479 1437 342 1778 PB.3049.3 chr4 - 3185 1 genic_intron novelGene_1178 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6656.4 chr11 + 4210 26 full-splice_match SIDT2 ENST00000324225.8 4406 26 194 2 no_subtype FALSE canonical NA NA 2773 None 11 12 0 FALSE 0 0 NA C coding 832 2496 338 2833 PB.3049.1 chr4 - 5694 1 incomplete-splice_match SETD7 ENST00000274031.7 7365 8 1668 4 no_subtype FALSE canonical NA NA NA None 2 30 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5560.4 chr9 - 2812 15 novel_not_in_catalog CRAT novel NA NA NA NA no_subtype FALSE canonical NA NA 266 None 3 19 0 TRUE 0 0 NA C coding 627 1881 329 2209 PB.2748.2 chr4 - 1589 2 full-splice_match HS3ST1 ENST00000510712.1 496 2 -157 -936 no_subtype FALSE canonical NA NA 297 None 2 5 0 FALSE 0 0 NA C coding 307 921 406 1326 PB.2748.3 chr4 - 1783 2 novel_not_in_catalog HS3ST1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1168 None 6 15 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.4423.3 chr7 - 1878 1 genic_intron novelGene_540 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2748.1 chr4 - 1482 2 full-splice_match HS3ST1 ENST00000002596.5 8031 2 875 5674 no_subtype FALSE canonical NA NA 192 None 8 2 0 FALSE 0 0 NA C coding 307 921 301 1221 PB.4729.6 chr7 + 2875 21 novel_in_catalog CUL1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2374 None 2 1 0 FALSE 0 0 NA B coding 455 1365 1088 2452 PB.4729.5 chr7 + 2993 10 novel_not_in_catalog CUL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1501 None 2 9 1 TRUE 0 0 NA B coding 413 1239 289 1527 PB.4729.4 chr7 + 1734 2 novel_in_catalog CUL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 133 None 2 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5477.2 chr9 - 4004 9 novel_not_in_catalog TRAF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 300 None 2 13 0 FALSE 0 0 NA B coding 416 1248 666 1913 PB.5477.3 chr9 - 2812 1 novel_in_catalog TRAF1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 11 15 0 FALSE 0 0 NA B coding 162 486 300 785 PB.2538.7 chr3 + 3153 2 novel_not_in_catalog MBNL1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 25 None 32 14 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.4077.6 chr6 - 2982 6 full-splice_match CD164 ENST00000504373.1 1402 6 -36 -1544 no_subtype FALSE canonical NA NA 233 None 3 28 1 FALSE 0 0 NA C coding 155 465 185 649 PB.2538.1 chr3 + 1633 1 genic_intron novelGene_1247 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 14 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1444.6 chr2 - 1411 12 novel_not_in_catalog CAPG novel NA NA NA NA no_subtype FALSE canonical NA NA 61 None 4 3 2 TRUE 0 0 NA C coding 348 1044 230 1273 PB.2538.3 chr3 + 5469 9 full-splice_match MBNL1 ENST00000355460.6 5941 9 446 26 no_subtype FALSE canonical NA NA 2099 None 2 13 0 FALSE 0 0 NA C coding 370 1110 969 2078 PB.2538.2 chr3 + 2714 2 novel_in_catalog MBNL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 202 None 3 25 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.9996.4 chr19 - 3776 13 novel_in_catalog AKT2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 173 None 3 32 0 FALSE 0 0 NA C coding 392 1176 258 1433 PB.3587.12 chr5 - 2533 16 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 137 None 4 6 1 FALSE 0 0 NA B coding 368 1104 667 1770 PB.10604.18 chr21 - 2735 17 novel_not_in_catalog ITGB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 79 None 2 9 1 TRUE 0 0 NA C coding 776 2328 83 2410 PB.10930.1 chrX - 1336 2 antisense novelGene_MAOA_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1144 None 2 8 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9624.1 chr19 + 1542 10 novel_not_in_catalog BSG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1142 None 85 14 3 TRUE 0 0 NA A coding 273 819 20 838 PB.9996.2 chr19 - 3220 14 full-splice_match AKT2 ENST00000392038.6 5300 14 58 2022 no_subtype FALSE canonical NA NA 157 None 54 13 0 FALSE 0 0 NA C coding 481 1443 242 1684 PB.10870.1 chrX + 3050 3 novel_not_in_catalog TCEANC novel NA NA NA NA no_subtype FALSE canonical NA NA 155 None 2 14 0 FALSE 0 0 NA B coding 351 1053 164 1216 PB.7959.289 chr14 - 1955 8 fusion IGHV3-60,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 114 None 2 13 2 TRUE 0 0 NA A coding 488 1464 374 1837 PB.10939.13 chrX + 3504 2 novel_in_catalog UBA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2348 None 4 21 0 FALSE 0 0 NA C coding 160 480 2222 2701 PB.7254.5 chr12 - 1573 6 novel_not_in_catalog HVCN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 180 None 3 9 0 FALSE 0 0 NA B coding 253 759 220 978 PB.8171.1 chr15 + 2666 19 full-splice_match ZWILCH ENST00000307897.9 3960 19 376 918 no_subtype TRUE canonical NA NA 1806 None 10 5 0 FALSE 0 0 NA A coding 591 1773 5 1777 PB.3825.1 chr6 + 2527 1 full-splice_match HSPA1B ENST00000375650.4 2521 1 2 -8 no_subtype FALSE canonical NA NA NA None 17 4 0 FALSE 0 0 NA A coding 641 1923 215 2137 PB.2148.2 chr3 + 2667 2 novel_not_in_catalog CCR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 2 14 0 FALSE 0 0 NA B coding 66 198 147 344 PB.7959.281 chr14 - 1954 8 fusion IGHV1-3,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 101 None 2 12 1 TRUE 0 0 NA A coding 375 1125 710 1834 PB.7959.280 chr14 - 1877 8 fusion IGHV4-34,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 15 2 TRUE 0 0 NA B coding 375 1125 633 1757 PB.7959.283 chr14 - 1925 8 fusion IGHV4-34,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 81 None 2 13 2 TRUE 0 0 NA B coding 597 1791 15 1805 PB.5958.1 chr10 - 1490 3 full-splice_match SFRP5 ENST00000266066.3 1836 3 341 5 no_subtype FALSE canonical NA NA 307 None 2 4 0 FALSE 0 0 NA A coding 179 537 193 729 PB.7959.285 chr14 - 1889 7 fusion IGHV2-5,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 66 None 2 14 2 TRUE 0 0 NA A coding 583 1749 21 1769 PB.7959.284 chr14 - 1947 9 fusion IGHV3-62,IGHM novel NA NA NA NA no_subtype TRUE non_canonical NA NA 124 None 2 9 1 TRUE 0 0 NA A coding 583 1749 79 1827 PB.5761.2 chr10 + 2090 2 full-splice_match ZNF22 ENST00000298299.3 2551 2 457 4 no_subtype FALSE canonical NA NA 47 None 25 10 0 FALSE 0 0 NA C coding 224 672 137 808 PB.5761.3 chr10 + 2065 2 novel_not_in_catalog ZNF22 novel NA NA NA NA no_subtype FALSE canonical NA NA 22 None 6 11 0 FALSE 0 0 NA C coding 224 672 112 783 PB.51.3 chr1 + 2890 14 novel_not_in_catalog PGD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2378 None 2 19 0 TRUE 0 0 NA B coding 370 1110 53 1162 PB.51.2 chr1 + 2225 14 novel_not_in_catalog PGD novel NA NA NA NA no_subtype FALSE canonical NA NA 1362 None 303 7 0 TRUE 0 0 NA B coding 483 1449 31 1479 PB.51.1 chr1 + 5782 42 novel_not_in_catalog KIF1B novel NA NA NA NA no_subtype FALSE canonical NA NA 5693 None 2 16 1 TRUE 0 0 NA A coding 1478 4434 4 4437 PB.3078.4 chr4 - 3012 2 genic_intron novelGene_1230 novel NA NA NA NA no_subtype FALSE canonical NA NA 2312 None 4 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3964.1 chr6 + 3077 3 novel_not_in_catalog PAQR8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2384 None 9 8 1 TRUE 0 0 NA C coding 354 1062 168 1229 PB.51.6 chr1 + 1974 13 novel_not_in_catalog PGD novel NA NA NA NA no_subtype FALSE canonical NA NA 1461 None 7 4 0 TRUE 0 0 NA B coding 470 1410 169 1578 PB.51.5 chr1 + 3149 13 novel_not_in_catalog PGD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2636 None 3 11 0 TRUE 0 0 NA B coding 364 1092 53 1144 PB.10465.1 chr20 + 1720 12 full-splice_match NPEPL1 ENST00000356091.10 2378 12 221 437 no_subtype FALSE canonical NA NA 1480 None 2 1 0 FALSE 0 0 NA A coding 523 1569 68 1636 PB.2875.1 chr4 - 512 3 full-splice_match PF4 ENST00000296029.3 604 3 99 -7 no_subtype FALSE canonical NA NA 163 None 15 3 0 FALSE 0 0 NA A coding 101 303 73 375 PB.3420.1 chr5 + 6166 1 genic DCP2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 67 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3041.2 chr4 + 3288 9 full-splice_match JADE1 ENST00000511647.5 3560 9 106 166 no_subtype FALSE canonical NA NA 1076 None 7 10 0 FALSE 0 0 NA C coding 509 1527 96 1622 PB.3041.1 chr4 + 3616 11 full-splice_match JADE1 ENST00000226319.10 5772 11 187 1969 no_subtype FALSE canonical NA NA 1715 None 14 5 1 FALSE 0 0 NA C coding 842 2526 95 2620 PB.615.1 chr1 + 1393 1 antisense novelGene_SEC22B_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9968.1 chr19 + 1278 7 full-splice_match PSMD8 ENST00000602911.5 1330 7 25 27 no_subtype FALSE canonical NA NA 733 None 13 1 0 FALSE 0 0 NA A coding 287 861 8 868 PB.4706.1 chr7 - 2780 2 novel_not_in_catalog HIPK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1974 None 7 15 1 TRUE 0 0 NA B coding 124 372 1456 1827 PB.9386.2 chr17 - 5300 18 novel_not_in_catalog UBE2O novel NA NA NA NA no_subtype FALSE canonical NA NA 426 None 3 12 1 FALSE 0 0 NA A coding 1005 3015 10 3024 PB.5781.1 chr10 + 4425 1 genic_intron novelGene_509 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3713.1 chr6 + 1306 9 novel_not_in_catalog NQO2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1026 None 2 4 1 TRUE 0 0 NA A coding 231 693 508 1200 PB.9664.1 chr19 - 2609 4 genic AC005262.2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1442 None 2 27 3 TRUE 0 0 NA B coding 236 708 1079 1786 PB.1341.1 chr2 - 2791 15 incomplete-splice_match CCDC88A ENST00000621814.4 3089 16 -256 554 internal_fragment FALSE canonical NA NA 853 None 8 1 0 FALSE 0 0 NA A coding 667 2001 791 2791 PB.6031.1 chr10 - 2839 3 antisense novelGene_RP11-139K1.2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 473 None 6 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10176.1 chr19 + 2112 12 full-splice_match U2AF2 ENST00000450554.6 3022 12 903 7 no_subtype FALSE canonical NA NA 1337 None 14 4 0 FALSE 0 0 NA A coding 471 1413 57 1469 PB.701.1 chr1 - 1669 7 full-splice_match C1orf43 ENST00000368521.9 1708 7 16 23 no_subtype FALSE canonical NA NA 249 None 35 4 0 FALSE 0 0 NA C coding 253 759 184 942 PB.10070.4 chr19 - 3167 19 full-splice_match PRKD2 ENST00000433867.5 3321 19 151 3 no_subtype FALSE canonical NA NA 162 None 7 2 0 FALSE 0 0 NA C coding 878 2634 328 2961 PB.10070.5 chr19 - 3013 18 novel_not_in_catalog PRKD2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 218 None 2 11 0 TRUE 0 0 NA C coding 398 1194 1615 2808 PB.7878.1 chr14 - 2511 2 full-splice_match MOAP1 ENST00000556883.1 2529 2 9 9 no_subtype FALSE canonical NA NA 356 None 3 13 0 FALSE 0 0 NA A coding 351 1053 477 1529 PB.2151.2 chr3 + 1695 2 full-splice_match CCRL2 ENST00000399036.3 1796 2 98 3 no_subtype FALSE canonical NA NA 242 None 7 0 0 FALSE 0 0 NA C coding 344 1032 255 1286 PB.7923.3 chr14 + 2089 7 full-splice_match WDR25 ENST00000335290.10 2123 7 10 24 no_subtype FALSE canonical NA NA 1629 None 2 2 0 FALSE 0 0 NA C coding 536 1608 241 1848 PB.918.2 chr1 - 2616 1 incomplete-splice_match EDEM3 ENST00000367512.7 6678 21 2711 1352 no_subtype FALSE canonical NA NA NA None 4 12 0 FALSE 0 0 NA B coding 81 243 153 395 PB.7431.1 chr13 - 2904 1 antisense novelGene_PDS5B_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5207.1 chr9 - 5378 11 novel_not_in_catalog GLIS3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 147 None 2 18 1 TRUE 0 0 NA A coding 708 2124 218 2341 PB.11224.2 chrX - 1650 6 full-splice_match CLIC2 ENST00000369449.6 2655 6 -32 1037 no_subtype FALSE canonical NA NA 308 None 10 1 0 FALSE 0 0 NA C coding 247 741 252 992 PB.11219.1 chrX + 1477 14 incomplete-splice_match DKC1 ENST00000369550.9 2577 15 128 972 3prime_fragment FALSE canonical NA NA 1420 None 11 0 0 FALSE 0 0 NA C coding 465 1395 83 1477 PB.3935.2 chr6 + 1900 7 novel_not_in_catalog ABCC10 novel NA NA NA NA no_subtype TRUE canonical NA NA 1406 None 5 6 1 TRUE 0 0 NA B coding 303 909 658 1566 PB.7274.8 chr12 + 1308 1 incomplete-splice_match OAS2 ENST00000342315.8 3613 11 2303 3 no_subtype FALSE canonical NA NA NA None 10 3 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8602.2 chr16 - 2805 4 full-splice_match SNX20 ENST00000330943.8 2904 4 47 52 no_subtype FALSE canonical NA NA 116 None 13 6 0 FALSE 0 0 NA C coding 316 948 126 1073 PB.10197.1 chr19 + 1843 3 antisense novelGene_ZSCAN18_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1701 None 3 10 1 FALSE 0 0 NA A coding 134 402 1106 1507 PB.7274.1 chr12 + 4559 10 novel_not_in_catalog OAS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1926 None 16 14 1 FALSE 0 0 NA B coding 401 1203 36 1238 PB.7274.3 chr12 + 3788 8 novel_not_in_catalog OAS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1155 None 4 13 0 TRUE 0 0 NA B coding 422 1266 56 1321 PB.7274.2 chr12 + 4513 11 novel_not_in_catalog OAS2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1878 None 19 24 0 TRUE 0 0 NA B coding 651 1953 92 2044 PB.7274.7 chr12 + 2719 2 incomplete-splice_match OAS2 ENST00000392583.6 4734 10 2016 -1 internal_fragment FALSE canonical NA NA 86 None 7 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4755.1 chr7 - 2466 15 full-splice_match ABCF2 ENST00000287844.6 3546 15 39 1041 no_subtype FALSE canonical NA NA 29 None 16 4 0 FALSE 0 0 NA A coding 623 1869 72 1940 PB.5925.2 chr10 + 3064 1 novel_in_catalog FFAR4 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C coding 221 663 30 692 PB.1004.8 chr1 + 2678 1 incomplete-splice_match SRGAP2 ENST00000573034.7 6301 22 3613 11 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA B coding 101 303 1997 2299 PB.9394.2 chr17 - 1872 3 full-splice_match SRSF2 ENST00000359995.9 1927 3 42 13 no_subtype FALSE canonical NA NA 534 None 24 3 0 FALSE 0 0 NA C coding 209 627 209 835 PB.6948.1 chr12 - 1544 4 full-splice_match TUBA1B ENST00000336023.9 1627 4 0 83 no_subtype FALSE canonical NA NA 98 None 697 0 0 FALSE 0 0 NA A coding 451 1353 96 1448 PB.7357.1 chr12 - 1740 9 novel_not_in_catalog EIF2B1 novel NA NA NA NA no_subtype FALSE canonical NA NA 109 None 38 6 1 FALSE 0 0 NA A coding 162 486 97 582 PB.2355.4 chr3 + 2665 8 incomplete-splice_match BBX ENST00000325805.12 3517 18 1327 -475 internal_fragment FALSE canonical NA NA 1698 None 2 21 0 FALSE 0 0 NA C coding 560 1680 104 1783 PB.6050.1 chr10 - 1576 7 full-splice_match PRDX3 ENST00000298510.3 1591 7 6 9 no_subtype FALSE canonical NA NA 73 None 237 5 0 FALSE 0 0 NA A coding 256 768 38 805 PB.79.1 chr1 + 1620 5 novel_in_catalog TMEM82 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1185 None 2 5 0 FALSE 0 0 NA A coding 110 330 940 1269 PB.8471.1 chr16 + 2827 2 genic_intron novelGene_161 novel NA NA NA NA no_subtype FALSE canonical NA NA 106 None 4 22 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.97.2 chr1 - 4210 25 novel_not_in_catalog EMC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 116 None 22 15 0 TRUE 0 0 NA A coding 993 2979 22 3000 PB.10466.11 chr20 + 3134 1 genic_intron novelGene_566 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10466.10 chr20 + 5723 2 novel_not_in_catalog GNAS novel NA NA NA NA no_subtype FALSE canonical NA NA 1042 None 3 45 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.1756.3 chr2 + 6169 2 genic GLS novel NA NA NA NA no_subtype FALSE canonical NA NA 2066 None 2 44 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.6685.2 chr11 - 4474 26 novel_in_catalog HYOU1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 68 None 11 15 0 FALSE 0 0 NA B coding 999 2997 76 3072 PB.1970.1 chr3 - 2162 13 novel_not_in_catalog CRBN novel NA NA NA NA no_subtype TRUE canonical NA NA 80 None 6 13 1 TRUE 0 0 NA B coding 442 1326 14 1339 PB.1970.2 chr3 - 1372 12 novel_not_in_catalog CRBN novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 9 0 0 TRUE 0 0 NA B coding 442 1326 5 1330 PB.5481.1 chr9 + 1672 1 antisense novelGene_STOM_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9394.3 chr17 - 2867 2 full-splice_match SRSF2 ENST00000392485.2 2885 2 1 17 no_subtype FALSE canonical NA NA 534 None 7 4 0 FALSE 0 0 NA C coding 209 627 209 835 PB.3678.1 chr5 - 2094 17 full-splice_match DDX41 ENST00000507955.5 2607 17 508 5 no_subtype FALSE canonical NA NA 43 None 7 0 0 FALSE 0 0 NA A coding 622 1866 17 1882 PB.6928.1 chr12 - 3625 17 full-splice_match RPAP3 ENST00000005386.7 4370 17 54 691 no_subtype FALSE canonical NA NA 56 None 3 10 0 FALSE 0 0 NA A coding 665 1995 63 2057 PB.7568.1 chr13 + 2975 2 full-splice_match ABHD13 ENST00000375898.3 5338 2 130 2233 no_subtype FALSE canonical NA NA 151 None 17 9 0 FALSE 0 0 NA A coding 337 1011 172 1182 PB.4420.1 chr7 - 3391 4 full-splice_match FIGNL1 ENST00000422854.5 582 4 38 -2847 no_subtype FALSE canonical NA NA 30 None 2 14 1 FALSE 0 0 NA C coding 674 2022 238 2259 PB.4420.2 chr7 - 3309 3 full-splice_match FIGNL1 ENST00000615084.4 3368 3 51 8 no_subtype FALSE canonical NA NA 39 None 2 20 1 FALSE 0 0 NA C coding 674 2022 159 2180 PB.10006.1 chr19 - 1432 1 antisense novelGene_AXL_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 1 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1004.1 chr1 + 6880 23 novel_in_catalog SRGAP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3484 None 5 13 1 FALSE 0 0 NA B coding 1071 3213 653 3865 PB.1193.4 chr2 + 2644 1 incomplete-splice_match LPIN1 ENST00000256720.6 5384 20 2735 6 no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA B coding 152 456 1900 2355 PB.1193.1 chr2 + 5307 22 novel_not_in_catalog LPIN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2553 None 2 14 0 TRUE 0 0 NA B coding 890 2670 41 2710 PB.7886.1 chr14 - 1905 2 antisense novelGene_IFI27_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1849 None 2 11 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7886.2 chr14 + 2765 1 novel_in_catalog IFI27 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 16 11 0 FALSE 0 0 NA C coding 115 345 948 1292 PB.7178.1 chr12 + 3563 15 full-splice_match NEDD1 ENST00000429527.6 3366 15 14 -211 no_subtype FALSE canonical NA NA 1949 None 8 10 0 FALSE 0 0 NA C coding 660 1980 72 2051 PB.5675.6 chr10 + 2011 5 novel_not_in_catalog CELF2 novel NA NA NA NA no_subtype TRUE canonical NA NA 863 None 21 5 1 TRUE 0 0 NA B coding 161 483 22 504 PB.5675.7 chr10 + 3673 6 novel_in_catalog CELF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 625 None 2 17 0 FALSE 0 0 NA B coding 159 477 22 498 PB.10187.1 chr19 - 2997 2 antisense novelGene_CTC-444N24.11_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2203 None 7 29 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5675.5 chr10 + 1703 12 novel_in_catalog CELF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1360 None 4 1 1 FALSE 0 0 NA B coding 488 1464 22 1485 PB.5675.2 chr10 + 1668 12 incomplete-splice_match CELF2 ENST00000636488.1 3908 14 231 2009 internal_fragment FALSE canonical NA NA 1345 None 14 0 0 FALSE 0 0 NA B coding 484 1452 19 1470 PB.4440.1 chr7 + 3206 10 novel_not_in_catalog RABGEF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3155 None 5 11 0 TRUE 0 0 NA A coding 491 1473 78 1550 PB.5675.1 chr10 + 3618 11 novel_in_catalog CELF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1268 None 8 6 0 FALSE 0 0 NA B coding 280 840 554 1393 PB.3335.1 chr5 + 3561 20 incomplete-splice_match IQGAP2 ENST00000379730.7 5442 35 1875 6 internal_fragment FALSE canonical NA NA 2636 None 2 8 0 FALSE 0 0 NA A coding 865 2595 153 2747 PB.217.1 chr1 + 1869 10 full-splice_match SERINC2 ENST00000373709.7 1997 10 120 8 no_subtype FALSE canonical NA NA 1262 None 19 8 0 FALSE 0 0 NA A coding 455 1365 31 1395 PB.741.2 chr1 + 3172 12 full-splice_match LMNA ENST00000368300.8 3190 12 7 11 no_subtype FALSE canonical NA NA 2173 None 69 5 0 FALSE 0 0 NA C coding 664 1992 206 2197 PB.6595.1 chr11 + 3975 1 full-splice_match SRSF8 ENST00000587424.2 4028 1 30 23 no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA C coding 282 846 1 846 PB.741.4 chr1 + 1964 10 incomplete-splice_match LMNA ENST00000368301.6 2461 13 496 1 internal_fragment FALSE canonical NA NA 1753 None 75 1 0 FALSE 0 0 NA C coding 572 1716 146 1861 PB.741.5 chr1 + 4040 10 novel_not_in_catalog LMNA novel NA NA NA NA no_subtype FALSE canonical NA NA 2391 None 4 10 0 TRUE 0 0 NA C coding 341 1023 209 1231 PB.5675.8 chr10 + 3590 8 novel_not_in_catalog CELF2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2742 None 2 9 0 TRUE 0 0 NA B coding 159 477 19 495 PB.5675.9 chr10 + 6292 3 antisense novelGene_RP3-323N1.2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4238 None 2 37 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.1789.1 chr2 + 2816 1 genic_intron novelGene_1375 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1323.1 chr2 + 2834 2 antisense novelGene_AC093732.1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2095 None 2 6 0 FALSE 0 0 NA A coding 164 492 1423 1914 PB.7862.2 chr14 + 1528 1 genic_intron novelGene_838 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.11074.1 chrX - 3821 19 novel_not_in_catalog SYTL4 novel NA NA NA NA no_subtype FALSE canonical NA NA 117 None 8 11 0 TRUE 0 0 NA B coding 671 2013 276 2288 PB.7862.1 chr14 + 1536 2 genic_intron novelGene_838 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 19 None 6 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5925.1 chr10 + 1712 3 full-splice_match FFAR4 ENST00000371481.8 3605 3 19 1874 no_subtype FALSE canonical NA NA 733 None 2 6 0 FALSE 0 0 NA C coding 361 1083 38 1120 PB.516.1 chr1 + 1450 11 full-splice_match RTCA ENST00000370128.8 2535 11 83 1002 no_subtype FALSE canonical NA NA 1085 None 19 2 0 FALSE 0 0 NA A coding 366 1098 87 1184 PB.696.2 chr1 - 2649 14 full-splice_match CRTC2 ENST00000368633.1 2644 14 -4 -1 no_subtype FALSE canonical NA NA 285 None 28 4 0 FALSE 0 0 NA C coding 693 2079 133 2211 PB.670.5 chr1 - 3015 5 novel_not_in_catalog CDC42SE1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 133 None 2 29 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.7043.1 chr12 - 1786 10 full-splice_match ATP5B ENST00000262030.7 1839 10 48 5 no_subtype FALSE canonical NA NA 184 None 392 2 0 FALSE 0 0 NA C coding 529 1587 58 1644 PB.2502.4 chr3 + 2895 1 novel_in_catalog RASA2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.354.1 chr1 + 2794 6 full-splice_match CMPK1 ENST00000371873.9 2930 6 111 25 no_subtype FALSE canonical NA NA 683 None 2 13 0 FALSE 0 0 NA C coding 228 684 39 722 PB.8828.1 chr17 - 2767 13 novel_not_in_catalog INPP5K novel NA NA NA NA no_subtype FALSE canonical NA NA 108 None 129 9 1 TRUE 0 0 NA A coding 448 1344 182 1525 PB.2502.3 chr3 + 1805 2 genic_intron novelGene_1193 novel NA NA NA NA no_subtype FALSE canonical NA NA 1453 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2854.1 chr4 + 3764 1 incomplete-splice_match REST ENST00000619101.4 7114 4 3349 2 no_subtype FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8688.5 chr16 - 2838 2 novel_in_catalog DPEP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2249 None 19 9 0 FALSE 0 0 NA B coding 155 465 1928 2392 PB.8042.1 chr15 + 1689 4 incomplete-splice_match MAP1A ENST00000300231.5 10258 6 15 8554 3prime_fragment FALSE canonical NA NA 285 None 6 0 0 FALSE 0 0 NA A coding 418 1254 436 1689 PB.701.2 chr1 - 1565 6 novel_not_in_catalog C1orf43 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 220 None 2 5 0 TRUE 0 0 NA C coding 226 678 163 840 PB.775.3 chr1 + 1657 11 novel_not_in_catalog FCRL6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1446 None 3 5 1 TRUE 0 0 NA B coding 339 1017 114 1130 PB.9279.3 chr17 + 1699 2 genic_intron novelGene_580 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 66 None 2 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5495.2 chr9 + 6317 2 genic RP11-121A14.3 novel NA NA NA NA no_subtype FALSE canonical NA NA 947 None 2 31 1 TRUE 0 0 NA A coding 121 363 5099 5461 PB.5495.3 chr9 + 2575 10 novel_in_catalog NEK6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 975 None 5 9 0 FALSE 0 0 NA C coding 313 939 145 1083 PB.6111.4 chr11 + 1598 5 novel_in_catalog RASSF7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1137 None 2 5 0 FALSE 0 0 NA C coding 330 990 47 1036 PB.5121.1 chr8 - 2880 2 genic_intron novelGene_1100 novel NA NA NA NA no_subtype TRUE canonical NA NA 509 None 4 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6111.2 chr11 + 1520 6 novel_in_catalog RASSF7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1059 None 4 3 0 FALSE 0 0 NA C coding 366 1098 47 1144 PB.6111.3 chr11 + 1437 5 novel_in_catalog RASSF7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 976 None 2 5 1 FALSE 0 0 NA C coding 313 939 47 985 PB.4448.1 chr7 - 1735 7 incomplete-splice_match BAZ1B ENST00000404251.1 5428 19 263 3430 internal_fragment FALSE canonical NA NA 189 None 2 2 0 FALSE 0 0 NA B coding 551 1653 83 1735 PB.6111.1 chr11 + 1708 4 full-splice_match RASSF7 ENST00000397582.7 1731 4 29 -6 no_subtype FALSE canonical NA NA 878 None 22 3 0 FALSE 0 0 NA C coding 330 990 78 1067 PB.4851.1 chr8 - 4059 7 novel_not_in_catalog TRIM35 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 452 None 9 14 0 TRUE 0 0 NA A coding 493 1479 18 1496 PB.3641.1 chr5 - 3990 7 novel_not_in_catalog KCNMB1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 78 None 2 16 2 TRUE 0 0 NA B coding 191 573 103 675 PB.5833.2 chr10 - 1884 10 novel_not_in_catalog SPOCK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 455 None 43 6 1 FALSE 0 0 NA B coding 315 945 587 1531 PB.5833.1 chr10 - 3516 1 incomplete-splice_match SPOCK2 ENST00000317376.8 5328 12 1810 3 no_subtype FALSE canonical NA NA NA None 9 29 0 FALSE 0 0 NA B coding 102 306 176 481 PB.9809.1 chr19 - 1277 7 novel_in_catalog TRMT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 86 None 2 7 0 FALSE 0 0 NA A coding 335 1005 119 1123 PB.8111.1 chr15 + 4086 5 novel_not_in_catalog POLR2M novel NA NA NA NA no_subtype FALSE canonical NA NA 1075 None 15 28 0 TRUE 0 0 NA A coding 368 1104 110 1213 PB.5696.1 chr10 - 3501 11 full-splice_match TRDMT1 ENST00000377799.7 3527 11 22 4 no_subtype FALSE canonical NA NA 90 None 2 14 0 FALSE 0 0 NA A coding 391 1173 27 1199 PB.1639.1 chr2 - 2658 5 full-splice_match RND3 ENST00000375734.6 2777 5 2 117 no_subtype FALSE canonical NA NA 398 None 65 10 0 FALSE 0 0 NA A coding 244 732 249 980 PB.8688.4 chr16 - 1317 9 novel_not_in_catalog DPEP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 141 None 3 1 0 FALSE 0 0 NA B coding 328 984 226 1209 PB.6991.3 chr12 - 2755 16 novel_not_in_catalog ITGB7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 50 None 104 2 1 TRUE 0 0 NA C coding 798 2394 130 2523 PB.4436.1 chr7 + 1526 17 full-splice_match ASL ENST00000304874.13 2143 17 6 611 no_subtype FALSE canonical NA NA 1346 None 14 0 0 FALSE 0 0 NA A coding 464 1392 97 1488 PB.5648.1 chr10 - 4058 23 novel_in_catalog DIP2C novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 338 None 2 9 0 FALSE 0 0 NA A coding 1000 3000 251 3250 PB.10459.3 chr20 + 1901 8 novel_not_in_catalog PCK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1154 None 2 9 1 TRUE 0 0 NA C coding 374 1122 135 1256 PB.10459.2 chr20 + 1815 1 incomplete-splice_match PCK1 ENST00000467047.1 5074 2 30 3230 no_subtype FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10459.1 chr20 + 1639 2 full-splice_match PCK1 ENST00000475833.1 1037 2 7 -609 no_subtype FALSE canonical NA NA 94 None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6991.1 chr12 - 2756 17 novel_not_in_catalog ITGB7 novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 2 3 0 FALSE 0 0 NA C coding 798 2394 128 2521 PB.10459.5 chr20 + 3098 9 novel_in_catalog PCK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1989 None 7 9 0 FALSE 0 0 NA C coding 329 987 135 1121 PB.10459.4 chr20 + 2655 10 full-splice_match PCK1 ENST00000319441.5 4341 10 30 1656 no_subtype FALSE canonical NA NA 1548 None 24 8 0 FALSE 0 0 NA C coding 622 1866 135 2000 PB.8536.1 chr16 + 1307 2 novel_not_in_catalog SPN novel NA NA NA NA no_subtype FALSE canonical NA NA 361 None 2 5 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.5073.1 chr8 - 2751 7 novel_in_catalog EIF3H novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 155 None 4 8 0 FALSE 0 0 NA C coding 179 537 2041 2577 PB.5345.12 chr9 - 2053 18 novel_not_in_catalog HNRNPK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 36 None 10 4 1 TRUE 0 0 NA C coding 464 1392 167 1558 PB.6586.1 chr11 + 3891 1 incomplete-splice_match FAT3 ENST00000533797.1 7894 8 4001 3 no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.183.1 chr1 + 4289 17 novel_not_in_catalog WDTC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2236 None 2 28 1 TRUE 0 0 NA A coding 677 2031 401 2431 PB.8452.1 chr16 + 2529 8 full-splice_match BFAR ENST00000261658.6 3039 8 105 405 no_subtype FALSE canonical NA NA 1332 None 6 3 0 FALSE 0 0 NA C coding 450 1350 173 1522 PB.922.1 chr1 + 2985 7 full-splice_match RNF2 ENST00000367510.7 3606 7 185 436 no_subtype FALSE canonical NA NA 1012 None 43 10 0 FALSE 0 0 NA A coding 336 1008 104 1111 PB.1694.1 chr2 + 2538 16 full-splice_match DYNC1I2 ENST00000340296.8 2589 16 47 4 no_subtype FALSE canonical NA NA 1906 None 2 3 0 FALSE 0 0 NA A coding 612 1836 182 2017 PB.11186.4 chrX + 3374 15 novel_not_in_catalog MTM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1663 None 2 6 1 FALSE 0 0 NA B coding 377 1131 13 1143 PB.11186.1 chrX + 3420 16 novel_not_in_catalog MTM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1710 None 27 3 1 FALSE 0 0 NA B coding 377 1131 60 1190 PB.4398.1 chr7 + 1385 7 full-splice_match UBE2D4 ENST00000222402.7 3974 7 15 2574 no_subtype FALSE canonical NA NA 472 None 7 3 0 FALSE 0 0 NA A coding 147 441 75 515 PB.5101.1 chr8 - 3914 3 novel_in_catalog ZHX1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 63 None 4 7 0 FALSE 0 0 NA A coding 873 2619 403 3021 PB.10877.1 chrX - 1574 7 full-splice_match ASB9 ENST00000380488.8 1678 7 92 12 no_subtype FALSE canonical NA NA 276 None 2 3 0 FALSE 0 0 NA A coding 294 882 183 1064 PB.2937.2 chr4 - 3464 1 genic_intron novelGene_789 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A coding 100 300 2541 2840 PB.4051.2 chr6 - 1740 8 novel_not_in_catalog ATG5 novel NA NA NA NA no_subtype FALSE canonical NA NA 268 None 22 2 0 FALSE 0 0 NA C coding 275 825 327 1151 PB.8364.2 chr16 - 3683 27 novel_not_in_catalog CLCN7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 221 None 8 16 1 TRUE 0 0 NA B coding 805 2415 81 2495 PB.1628.1 chr2 + 3052 1 genic_intron novelGene_1216 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8364.1 chr16 - 3638 27 novel_not_in_catalog CLCN7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 176 None 2 16 1 TRUE 0 0 NA B coding 747 2241 210 2450 PB.5136.2 chr8 - 2722 7 novel_in_catalog ST3GAL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 264 None 2 4 0 FALSE 0 0 NA C coding 340 1020 841 1860 PB.5136.3 chr8 + 4079 2 antisense novelGene_ST3GAL1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2508 None 2 22 1 FALSE 0 0 NA B coding 139 417 1693 2109 PB.3144.2 chr4 - 2650 8 novel_not_in_catalog CASP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 66 None 24 18 0 FALSE 0 0 NA B coding 277 831 249 1079 PB.5136.1 chr8 - 2821 10 full-splice_match ST3GAL1 ENST00000522652.5 2580 10 -199 -42 no_subtype FALSE canonical NA NA 356 None 5 3 0 FALSE 0 0 NA C coding 340 1020 938 1957 PB.5136.4 chr8 - 1642 1 genic_intron novelGene_1154 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 11 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5974.4 chr10 + 4083 15 novel_in_catalog SEMA4G novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1776 None 3 6 0 FALSE 0 0 NA B coding 838 2514 87 2600 PB.2030.6 chr3 - 1710 4 novel_not_in_catalog SH3BP5 novel NA NA NA NA no_subtype FALSE canonical NA NA 312 None 2 8 1 TRUE 0 0 NA C coding 112 336 175 510 PB.10853.1 chrX - 3689 11 novel_not_in_catalog ARSD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 75 None 3 13 0 TRUE 0 0 NA C coding 593 1779 32 1810 PB.2746.1 chr4 - 6669 1 genic ZNF518B novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 32 0 FALSE 0 0 NA C coding 1074 3222 213 3434 PB.2746.2 chr4 - 2984 2 full-splice_match ZNF518B ENST00000507515.1 527 2 5 -2462 no_subtype FALSE canonical NA NA 84 None 5 7 0 FALSE 0 0 NA C coding 896 2688 296 2983 PB.10853.2 chrX - 4175 10 full-splice_match ARSD ENST00000381154.5 5159 10 15 969 no_subtype FALSE canonical NA NA 105 None 4 15 0 FALSE 0 0 NA C coding 593 1779 62 1840 PB.4845.2 chr8 + 6119 14 novel_in_catalog DOCK5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1617 None 3 35 0 FALSE 0 0 NA B coding 558 1674 46 1719 PB.8179.3 chr15 + 1323 2 novel_in_catalog PIAS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 33 None 7 6 0 FALSE 0 0 NA C coding 161 483 10 492 PB.4845.1 chr8 + 6789 21 incomplete-splice_match DOCK5 ENST00000276440.11 10075 52 3276 10 internal_fragment FALSE canonical NA NA 2276 None 3 35 0 FALSE 0 0 NA B coding 792 2376 3 2378 PB.8179.6 chr15 + 2525 1 novel_in_catalog PIAS1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8179.7 chr15 + 3783 1 incomplete-splice_match PIAS1 ENST00000249636.10 8115 14 1947 2386 no_subtype FALSE canonical NA NA NA None 2 35 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5552.2 chr9 - 1827 12 full-splice_match C9orf114 ENST00000361256.9 4286 12 26 2433 no_subtype FALSE canonical NA NA 51 None 15 6 0 FALSE 0 0 NA A coding 376 1128 16 1143 PB.4845.5 chr8 + 3628 1 incomplete-splice_match DOCK5 ENST00000276440.11 10075 52 6437 11 no_subtype FALSE canonical NA NA NA None 6 31 0 FALSE 0 0 NA B coding 103 309 515 823 PB.3851.4 chr6 + 1563 4 antisense novelGene_TAPBP_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1308 None 98 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3851.6 chr6 + 2236 15 full-splice_match PHF1 ENST00000374516.7 2330 15 76 18 no_subtype FALSE canonical NA NA 1610 None 5 7 1 FALSE 0 0 NA C coding 567 1701 196 1896 PB.3851.7 chr6 + 2751 13 novel_in_catalog PHF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2125 None 6 3 0 FALSE 0 0 NA C coding 276 828 847 1674 PB.3851.1 chr6 + 1579 2 antisense novelGene_TAPBP_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 658 None 16 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7100.1 chr12 + 2956 1 incomplete-splice_match DYRK2 ENST00000344096.3 8912 3 906 5051 no_subtype FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA A coding 408 1224 87 1310 PB.3851.3 chr6 + 1541 6 antisense novelGene_TAPBP_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1447 None 2 14 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.10619.1 chr22 + 3275 8 novel_not_in_catalog BCL2L13 novel NA NA NA NA no_subtype FALSE canonical NA NA 3055 None 6 14 1 TRUE 0 0 NA B coding 485 1455 191 1645 PB.164.1 chr1 + 462 2 full-splice_match CD52 ENST00000374213.2 468 2 1 5 no_subtype FALSE canonical NA NA 114 None 3 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9319.3 chr17 + 2980 16 novel_in_catalog NOL11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2574 None 2 5 0 FALSE 0 0 NA C coding 374 1122 610 1731 PB.9319.2 chr17 + 2522 18 full-splice_match NOL11 ENST00000253247.8 2947 18 79 346 no_subtype FALSE canonical NA NA 2079 None 9 4 0 FALSE 0 0 NA C coding 719 2157 37 2193 PB.3037.1 chr4 + 3700 16 full-splice_match PLK4 ENST00000270861.9 3841 16 52 89 no_subtype FALSE canonical NA NA 3032 None 7 6 0 FALSE 0 0 NA A coding 929 2787 346 3132 PB.3851.9 chr6 + 2234 15 full-splice_match PHF1 ENST00000495509.6 1752 15 -101 -381 no_subtype FALSE canonical NA NA 1611 None 2 4 1 FALSE 0 0 NA C coding 419 1257 208 1464 PB.9291.1 chr17 - 3187 1 antisense novelGene_MAP3K3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 11 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8855.1 chr17 - 1313 1 incomplete-splice_match UBE2G1 ENST00000396981.6 3974 6 2659 3 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10979.1 chrX - 2533 13 full-splice_match MAGED4B ENST00000335504.9 2578 13 42 3 no_subtype FALSE canonical NA NA 77 None 2 0 0 FALSE 0 0 NA A coding 741 2223 109 2331 PB.3221.1 chr5 - 2581 5 full-splice_match TTC33 ENST00000337702.4 2612 5 28 3 no_subtype FALSE canonical NA NA 124 None 12 7 0 FALSE 0 0 NA A coding 262 786 126 911 PB.11048.1 chrX + 2929 5 novel_in_catalog ATP7A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1500 None 2 7 0 FALSE 0 0 NA A coding 550 1650 165 1814 PB.3616.3 chr5 - 5532 1 antisense novelGene_CYFIP2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 44 0 FALSE 0 0 NA B coding 130 390 1774 2163 PB.5974.2 chr10 + 4480 15 novel_in_catalog SEMA4G novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2171 None 3 9 0 FALSE 0 0 NA B coding 843 2529 467 2995 PB.7687.1 chr14 - 2595 2 antisense novelGene_ARF6_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 23 None 42 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10331.1 chr20 + 2575 3 antisense novelGene_EIF2S2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2489 None 2 23 2 FALSE 0 0 NA A coding 112 336 1147 1482 PB.700.1 chr1 - 2166 9 full-splice_match TPM3 ENST00000328159.8 1771 9 -70 -325 no_subtype FALSE canonical NA NA 202 None 4 12 0 FALSE 0 0 NA C coding 248 744 71 814 PB.700.3 chr1 - 2905 7 novel_in_catalog TPM3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 216 None 5 14 0 FALSE 0 0 NA C coding 152 456 85 540 PB.700.2 chr1 - 4214 6 novel_in_catalog TPM3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 202 None 4 24 0 FALSE 0 0 NA C coding 152 456 71 526 PB.1574.6 chr2 - 1677 15 novel_not_in_catalog BIN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 23 None 2 6 2 TRUE 0 0 NA B coding 308 924 12 935 PB.1574.7 chr2 - 1727 15 novel_not_in_catalog BIN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 39 None 2 7 2 TRUE 0 0 NA B coding 323 969 28 996 PB.10762.2 chr22 + 2782 1 incomplete-splice_match GTPBP1 ENST00000216044.9 5126 12 2338 7 no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA C coding 120 360 2260 2619 PB.10762.1 chr22 + 3549 12 full-splice_match GTPBP1 ENST00000216044.9 5126 12 226 1351 no_subtype FALSE canonical NA NA 1924 None 7 17 0 FALSE 0 0 NA C coding 660 1980 35 2014 PB.8875.2 chr17 + 5695 18 novel_not_in_catalog RABEP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2540 None 2 42 0 TRUE 0 0 NA B coding 815 2445 195 2639 PB.8875.1 chr17 + 3631 19 novel_not_in_catalog RABEP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2693 None 2 7 0 TRUE 0 0 NA B coding 862 2586 207 2792 PB.10114.3 chr19 + 2470 17 novel_in_catalog MED25 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2350 None 2 7 0 FALSE 0 0 NA C coding 298 894 1552 2445 PB.4109.2 chr6 + 1221 5 full-splice_match PKIB ENST00000368452.6 1398 5 173 4 no_subtype FALSE canonical NA NA 460 None 7 9 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.9829.1 chr19 - 1225 3 full-splice_match DNAJB1 ENST00000254322.2 2264 3 26 1013 no_subtype FALSE canonical NA NA 256 None 27 2 0 FALSE 0 0 NA A coding 340 1020 46 1065 PB.8849.1 chr17 + 2811 1 full-splice_match GSG2 ENST00000325418.5 2797 1 -20 6 no_subtype FALSE canonical NA NA NA None 6 3 0 FALSE 0 0 NA A coding 798 2394 54 2447 PB.4109.1 chr6 + 3539 2 novel_not_in_catalog PKIB novel NA NA NA NA no_subtype FALSE canonical NA NA 2926 None 9 17 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.7746.1 chr14 - 3465 2 novel_not_in_catalog TMEM30B novel NA NA NA NA no_subtype FALSE canonical NA NA 2482 None 33 19 0 TRUE 0 0 NA A coding 351 1053 326 1378 PB.10290.5 chr20 + 2908 1 genic_intron novelGene_187 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 12 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10080.1 chr19 + 1733 2 novel_not_in_catalog C5AR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 164 None 5 4 1 FALSE 0 0 NA A coding 337 1011 180 1190 PB.935.1 chr1 + 1341 5 full-splice_match RGS2 ENST00000235382.6 1354 5 1 12 no_subtype FALSE canonical NA NA 471 None 18 1 0 FALSE 0 0 NA C coding 211 633 31 663 PB.10489.1 chr20 + 2278 7 full-splice_match TPD52L2 ENST00000346249.8 2297 7 13 6 no_subtype FALSE canonical NA NA 588 None 6 7 0 FALSE 0 0 NA C coding 206 618 64 681 PB.2658.1 chr3 - 5769 5 novel_not_in_catalog BCL6 novel NA NA NA NA no_subtype FALSE canonical NA NA 57 None 2 14 1 TRUE 0 0 NA B coding 321 963 2168 3130 PB.5079.1 chr8 - 1638 1 genic_intron novelGene_1038 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2279.1 chr3 + 1577 2 antisense novelGene_PRICKLE2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 26 None 2 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7169.1 chr12 + 2953 13 full-splice_match VEZT ENST00000547997.5 3002 13 47 2 no_subtype TRUE canonical NA NA 1947 None 4 3 0 FALSE 0 0 NA A coding 731 2193 261 2453 PB.4721.5 chr7 + 1561 1 genic_intron novelGene_1197 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8250.1 chr15 + 7077 29 full-splice_match CEMIP ENST00000220244.7 7226 29 30 119 no_subtype FALSE canonical NA NA 4216 None 2 12 0 FALSE 0 0 NA A coding 1361 4083 259 4341 PB.5184.1 chr8 - 1606 2 full-splice_match ZNF251 ENST00000530353.1 2342 2 948 -212 no_subtype FALSE canonical NA NA 1278 None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.67.1 chr1 + 2697 6 full-splice_match PDPN ENST00000376057.8 2801 6 99 5 no_subtype FALSE canonical NA NA 649 None 8 15 0 FALSE 0 0 NA A coding 160 480 174 653 PB.4831.1 chr8 + 2585 6 novel_not_in_catalog TNFRSF10C novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1675 None 3 21 4 TRUE 0 0 NA A non_coding NA NA NA NA PB.6957.1 chr12 - 4075 25 full-splice_match FMNL3 ENST00000352151.9 4006 25 -53 -16 no_subtype FALSE canonical NA NA 392 None 4 6 0 FALSE 0 0 NA C coding 976 2928 267 3194 PB.10904.1 chrX + 3078 13 novel_not_in_catalog PDK3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1371 None 26 2 0 TRUE 0 0 NA C coding 415 1245 155 1399 PB.1682.2 chr2 + 1604 14 novel_in_catalog PPIG novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1549 None 2 3 0 FALSE 0 0 NA C coding 403 1209 396 1604 PB.4501.1 chr7 - 1696 10 full-splice_match CYP51A1 ENST00000003100.12 3210 10 56 1458 no_subtype FALSE canonical NA NA 302 None 43 3 0 FALSE 0 0 NA A coding 509 1527 111 1637 PB.7050.2 chr12 + 2731 10 novel_in_catalog LRP1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 1899 None 2 7 0 FALSE 0 0 NA B coding 522 1566 483 2048 PB.2219.1 chr3 - 2026 3 full-splice_match CISH ENST00000348721.3 2043 3 47 -30 no_subtype FALSE canonical NA NA 154 None 7 3 0 FALSE 0 0 NA A coding 258 774 135 908 PB.8012.4 chr15 + 2873 1 incomplete-splice_match OIP5-AS1 ENST00000500949.6 8829 4 1414 4543 no_subtype FALSE canonical NA NA NA None 2 33 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3686.1 chr5 - 2409 5 full-splice_match ZNF354A ENST00000335815.6 2484 5 43 32 no_subtype FALSE canonical NA NA 104 None 4 10 1 FALSE 0 0 NA A coding 605 1815 156 1970 PB.6165.3 chr11 + 3820 7 novel_in_catalog TRIM22 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2019 None 6 11 0 FALSE 0 0 NA C coding 309 927 1686 2612 PB.6165.2 chr11 + 2794 8 full-splice_match TRIM22 ENST00000379965.7 2989 8 193 2 no_subtype FALSE canonical NA NA 985 None 563 7 0 FALSE 0 0 NA C coding 498 1494 85 1578 PB.6165.1 chr11 + 2742 11 novel_not_in_catalog TRIM22 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1057 None 2 9 3 TRUE 0 0 NA C coding 498 1494 157 1650 PB.8012.5 chr15 + 1287 1 incomplete-splice_match OIP5-AS1 ENST00000500949.6 8829 4 7533 10 no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6165.6 chr11 + 3121 4 novel_in_catalog TRIM22 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1832 None 2 15 0 FALSE 0 0 NA C coding 179 537 112 648 PB.6165.5 chr11 + 3103 8 novel_not_in_catalog TRIM22 novel NA NA NA NA no_subtype FALSE canonical NA NA 1142 None 2 13 0 TRUE 0 0 NA C coding 318 954 147 1100 PB.6165.4 chr11 + 3371 10 novel_not_in_catalog TRIM22 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1562 None 2 26 3 TRUE 0 0 NA C coding 309 927 1229 2155 PB.11193.2 chrX - 1602 9 novel_in_catalog TREX2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 112 None 2 3 0 FALSE 0 0 NA B coding 389 1167 5 1171 PB.6165.9 chr11 + 3206 9 novel_not_in_catalog TRIM22 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1488 None 2 11 2 TRUE 0 0 NA C coding 357 1071 1011 2081 PB.6165.8 chr11 + 2956 9 novel_not_in_catalog TRIM22 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1155 None 2 7 0 FALSE 0 0 NA C coding 413 1239 510 1748 PB.4976.1 chr8 + 1726 1 antisense novelGene_TCEB1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2796.1 chr4 + 3140 1 genic_intron novelGene_376 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5065.4 chr8 - 1736 1 genic_intron novelGene_973 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4561.1 chr7 + 1687 10 novel_not_in_catalog TRIP6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1410 None 12 1 0 TRUE 0 0 NA A coding 476 1428 112 1539 PB.5065.2 chr8 - 1437 15 novel_not_in_catalog EIF3E novel NA NA NA NA no_subtype TRUE non_canonical NA NA 20 None 2 1 0 TRUE 0 0 NA B coding 464 1392 26 1417 PB.5065.1 chr8 - 1359 13 novel_not_in_catalog EIF3E novel NA NA NA NA no_subtype FALSE non_canonical NA NA 105 None 113 1 1 FALSE 0 0 NA B coding 396 1188 163 1350 PB.816.1 chr1 + 2692 8 full-splice_match UHMK1 ENST00000489294.1 8478 8 227 5559 no_subtype FALSE canonical NA NA 1044 None 528 9 0 FALSE 0 0 NA C coding 288 864 325 1188 PB.2658.3 chr3 - 3245 2 novel_not_in_catalog BCL6 novel NA NA NA NA no_subtype FALSE canonical NA NA 601 None 2 12 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.11139.1 chrX + 2902 1 full-splice_match GLUD2 ENST00000328078.2 2493 1 116 -525 no_subtype FALSE canonical NA NA NA None 55 11 0 FALSE 0 0 NA A coding 490 1470 186 1655 PB.7413.2 chr13 - 3429 6 novel_not_in_catalog SLC46A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 454 None 3 32 1 TRUE 0 0 NA B coding 461 1383 635 2017 PB.4381.15 chr7 - 1414 6 fusion TRGC1,TRGV9 novel NA NA NA NA no_subtype FALSE canonical NA NA 108 None 2 1 1 TRUE 0 0 NA B coding 141 423 63 485 PB.5846.1 chr10 - 1776 13 full-splice_match ANXA7 ENST00000372921.9 2452 13 -9 685 no_subtype FALSE canonical NA NA 65 None 59 2 0 FALSE 0 0 NA C coding 466 1398 67 1464 PB.7413.1 chr13 - 2551 6 novel_not_in_catalog SLC46A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 474 None 4 20 0 FALSE 0 0 NA B coding 126 378 761 1138 PB.7503.2 chr13 + 2664 13 novel_not_in_catalog WDFY2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2271 None 5 11 1 TRUE 0 0 NA B coding 176 528 1771 2298 PB.3867.2 chr6 + 2701 14 novel_in_catalog ZNF76 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1863 None 4 8 0 FALSE 0 0 NA C coding 570 1710 256 1965 PB.6463.1 chr11 + 3368 17 full-splice_match BBS1 ENST00000318312.11 3423 17 38 17 no_subtype FALSE canonical NA NA 1708 None 5 18 0 FALSE 0 0 NA A coding 593 1779 14 1792 PB.7959.129 chr14 - 1485 8 fusion IGHV1-24,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 104 None 2 13 3 TRUE 0 0 NA A coding 461 1383 59 1441 PB.3867.1 chr6 + 2693 14 novel_not_in_catalog ZNF76 novel NA NA NA NA no_subtype FALSE canonical NA NA 1855 None 2 8 0 FALSE 0 0 NA C coding 560 1680 278 1957 PB.9339.1 chr17 + 3009 14 full-splice_match COG1 ENST00000299886.8 3079 14 66 4 no_subtype TRUE canonical NA NA 2819 None 41 2 0 FALSE 0 0 NA A coding 980 2940 15 2954 PB.7570.1 chr13 + 764 6 full-splice_match TNFSF13B ENST00000375887.8 2582 6 342 1476 no_subtype FALSE canonical NA NA 581 None 7 0 0 FALSE 0 0 NA A coding 78 234 458 691 PB.10639.2 chr22 + 4475 14 novel_not_in_catalog DGCR8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2635 None 2 10 2 FALSE 0 0 NA B coding 515 1545 458 2002 PB.10639.1 chr22 + 4125 16 novel_not_in_catalog DGCR8 novel NA NA NA NA no_subtype TRUE canonical NA NA 2632 None 8 9 0 TRUE 0 0 NA B coding 754 2262 449 2710 PB.6696.1 chr11 - 5562 6 full-splice_match NECTIN1 ENST00000264025.7 5840 6 266 12 no_subtype FALSE canonical NA NA 344 None 4 28 0 FALSE 0 0 NA C coding 479 1437 380 1816 PB.415.1 chr1 - 3444 2 genic MIR3671 novel NA NA NA NA no_subtype FALSE canonical NA NA 1532 None 2 26 1 FALSE 0 0 NA A coding 106 318 1687 2004 PB.2265.6 chr3 + 3840 15 novel_not_in_catalog FLNB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2965 None 2 8 1 TRUE 0 0 NA B coding 610 1830 557 2386 PB.7451.12 chr13 - 2872 2 genic_intron novelGene_408 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2674 None 2 34 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2265.1 chr3 + 6803 32 novel_not_in_catalog FLNB novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5930 None 2 10 1 TRUE 0 0 NA B coding 1661 4983 369 5351 PB.7451.10 chr13 - 3546 9 novel_not_in_catalog ELF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 74 None 17 7 1 TRUE 0 0 NA C coding 619 1857 305 2161 PB.7451.11 chr13 - 2736 5 novel_not_in_catalog ELF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 89 None 2 31 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.2310.1 chr3 + 1726 8 novel_in_catalog ROBO2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1064 None 2 6 0 FALSE 0 0 NA A coding 312 936 391 1326 PB.6447.1 chr11 - 1553 11 full-splice_match EFEMP2 ENST00000307998.10 2034 11 100 381 no_subtype FALSE canonical NA NA 124 None 9 2 0 FALSE 0 0 NA A coding 443 1329 132 1460 PB.469.5 chr1 - 1577 10 fusion GBP3,GBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 49 None 12 0 0 FALSE 0 0 NA B coding 503 1509 69 1577 PB.469.7 chr1 - 1503 9 fusion GBP3,GBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 51 None 6 1 0 FALSE 0 0 NA B coding 477 1431 71 1501 PB.469.9 chr1 - 1450 4 incomplete-splice_match GBP1 ENST00000370473.4 3035 11 1575 10 5prime_fragment FALSE canonical NA NA 13 None 3 4 1 FALSE 0 0 NA C coding 122 366 56 421 PB.9445.1 chr17 + 1757 16 novel_not_in_catalog ASPSCR1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1663 None 4 4 0 FALSE 0 0 NA B coding 543 1629 46 1674 PB.6650.1 chr11 + 2516 7 full-splice_match ZBTB16 ENST00000335953.8 2523 7 -42 49 no_subtype TRUE canonical NA NA 2214 None 2 0 0 FALSE 0 0 NA A coding 673 2019 423 2441 PB.2205.6 chr3 + 6146 22 novel_in_catalog RBM5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5521 None 2 18 0 FALSE 0 0 NA C coding 568 1704 3638 5341 PB.2205.7 chr3 + 3030 24 novel_in_catalog RBM5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2406 None 5 3 0 FALSE 0 0 NA C coding 568 1704 826 2529 PB.2205.4 chr3 + 3041 25 novel_not_in_catalog RBM5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2419 None 3 5 1 TRUE 0 0 NA C coding 643 1929 614 2542 PB.2205.5 chr3 + 5826 20 novel_in_catalog RBM5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 5207 None 3 19 0 FALSE 0 0 NA C coding 272 816 4515 5330 PB.2205.2 chr3 + 2649 5 full-splice_match RBM5 ENST00000469838.5 2716 5 51 16 no_subtype FALSE canonical NA NA 452 None 86 9 0 FALSE 0 0 NA C coding 143 429 114 542 PB.2205.3 chr3 + 2921 23 novel_in_catalog RBM5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2297 None 10 3 0 FALSE 0 0 NA C coding 756 2268 153 2420 PB.2205.1 chr3 + 3086 25 full-splice_match RBM5 ENST00000347869.7 3188 25 35 67 no_subtype FALSE canonical NA NA 2462 None 92 3 0 FALSE 0 0 NA C coding 815 2445 141 2585 PB.5005.1 chr8 - 3701 1 incomplete-splice_match MMP16 ENST00000286614.10 11558 10 7849 9 no_subtype FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9445.2 chr17 + 1777 16 novel_not_in_catalog ASPSCR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1684 None 12 5 1 FALSE 0 0 NA B coding 347 1041 18 1058 PB.6171.1 chr11 + 2400 6 full-splice_match SMPD1 ENST00000342245.8 2452 6 51 1 no_subtype TRUE canonical NA NA 1603 None 2 2 0 FALSE 0 0 NA C coding 631 1893 118 2010 PB.6171.2 chr11 + 2823 4 novel_in_catalog SMPD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2028 None 2 10 1 FALSE 0 0 NA C coding 492 1476 112 1587 PB.6171.3 chr11 + 3883 3 novel_in_catalog SMPD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3087 None 2 20 0 FALSE 0 0 NA C coding 396 1188 112 1299 PB.11135.3 chrX - 1788 1 novel_in_catalog LAMP2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8968.1 chr17 + 1777 7 full-splice_match TVP23B ENST00000307767.12 2064 7 279 8 no_subtype FALSE canonical NA NA 611 None 19 7 0 FALSE 0 0 NA C coding 205 615 21 635 PB.8968.2 chr17 + 2761 6 novel_not_in_catalog TVP23B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1589 None 2 28 3 TRUE 0 0 NA C non_coding NA NA NA NA PB.619.1 chr1 + 2803 1 full-splice_match RP11-289I10.2 ENST00000433527.1 519 1 -44 -2240 no_subtype FALSE canonical NA NA NA None 10 16 0 FALSE 0 0 NA A coding 172 516 45 560 PB.10585.1 chr21 - 1676 2 antisense novelGene_PKNOX1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 226 None 2 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8090.1 chr15 - 3411 27 novel_not_in_catalog MYO5C novel NA NA NA NA no_subtype TRUE canonical NA NA 159 None 2 2 0 TRUE 0 0 NA A coding 1093 3279 133 3411 PB.11135.5 chrX - 2650 10 novel_not_in_catalog LAMP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 191 None 8 7 0 TRUE 0 0 NA B coding 410 1230 128 1357 PB.3394.1 chr5 + 3826 1 novel_in_catalog RGMB novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9422.2 chr17 - 1593 13 novel_not_in_catalog EIF4A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 86 None 47 7 1 TRUE 0 0 NA A coding 405 1215 152 1366 PB.1693.1 chr2 + 4172 4 full-splice_match CYBRD1 ENST00000321348.8 4365 4 183 10 no_subtype FALSE canonical NA NA 572 None 53 13 0 FALSE 0 0 NA C coding 286 858 16 873 PB.91.2 chr1 + 2253 16 full-splice_match PADI4 ENST00000375448.4 2267 16 0 14 no_subtype FALSE canonical NA NA 1784 None 2 2 0 FALSE 0 0 NA C coding 663 1989 27 2015 PB.91.1 chr1 + 2834 10 novel_in_catalog PADI4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1075 None 3 3 0 FALSE 0 0 NA C coding 407 1221 29 1249 PB.7758.6 chr14 + 5919 11 novel_not_in_catalog PLEKHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5156 None 2 31 3 TRUE 0 0 NA B coding 213 639 1899 2537 PB.7758.7 chr14 + 5952 16 novel_in_catalog PLEKHG3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4590 None 3 6 0 FALSE 0 0 NA B coding 724 2172 3138 5309 PB.7758.2 chr14 + 5680 20 novel_not_in_catalog PLEKHG3 novel NA NA NA NA no_subtype TRUE canonical NA NA 4319 None 2 11 1 TRUE 0 0 NA B coding 1311 3933 1106 5038 PB.7758.3 chr14 + 2479 1 genic_intron novelGene_613 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7758.1 chr14 + 5850 16 novel_not_in_catalog PLEKHG3 novel NA NA NA NA no_subtype TRUE canonical NA NA 4492 None 3 4 0 FALSE 0 0 NA B coding 724 2172 3040 5211 PB.6339.2 chr11 + 3244 6 novel_not_in_catalog FAM111B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2755 None 2 5 0 TRUE 0 0 NA B coding 734 2202 327 2528 PB.6339.3 chr11 + 3152 6 novel_not_in_catalog FAM111B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3115 None 2 6 0 TRUE 0 0 NA B coding 734 2202 196 2397 PB.7758.8 chr14 + 5827 16 novel_not_in_catalog PLEKHG3 novel NA NA NA NA no_subtype FALSE canonical NA NA 4469 None 2 4 0 FALSE 0 0 NA B coding 724 2172 3017 5188 PB.6339.1 chr11 + 3135 5 novel_not_in_catalog FAM111B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2646 None 2 5 0 TRUE 0 0 NA B coding 734 2202 218 2419 PB.1962.1 chr2 + 2741 14 novel_not_in_catalog FARP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2698 None 7 7 0 TRUE 0 0 NA B coding 795 2385 142 2526 PB.3213.1 chr5 + 3822 24 novel_not_in_catalog EGFLAM novel NA NA NA NA no_subtype TRUE canonical NA NA 3112 None 4 3 0 TRUE 0 0 NA A coding 1009 3027 238 3264 PB.11053.1 chrX - 2568 3 full-splice_match CYSLTR1 ENST00000373304.3 2576 3 -54 62 no_subtype FALSE canonical NA NA 233 None 2 7 0 FALSE 0 0 NA C coding 337 1011 348 1358 PB.4133.1 chr6 - 1446 1 incomplete-splice_match STX7 ENST00000367941.6 15791 10 2588 11758 no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4133.2 chr6 - 3774 11 novel_not_in_catalog STX7 novel NA NA NA NA no_subtype FALSE canonical NA NA 110 None 28 22 0 TRUE 0 0 NA B coding 261 783 169 951 PB.9325.2 chr17 - 2052 5 novel_in_catalog SLC16A6 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 240 None 2 4 0 FALSE 0 0 NA A coding 523 1569 9 1577 PB.10599.1 chr21 + 2517 2 full-splice_match LRRC3 ENST00000291592.5 5869 2 19 3333 no_subtype FALSE canonical NA NA 151 None 2 18 0 FALSE 0 0 NA A coding 257 771 299 1069 PB.10625.1 chr22 - 1699 10 full-splice_match DGCR14 ENST00000252137.10 5392 10 27 3666 no_subtype FALSE canonical NA NA 152 None 9 1 0 FALSE 0 0 NA A coding 476 1428 18 1445 PB.628.1 chr1 + 1177 8 full-splice_match POLR3GL ENST00000369314.1 1165 8 -14 2 no_subtype FALSE canonical NA NA 691 None 3 0 0 FALSE 0 0 NA C coding 218 654 122 775 PB.8956.3 chr17 + 1448 1 incomplete-splice_match ALKBH5 ENST00000490106.1 2146 2 694 5 no_subtype FALSE canonical NA NA NA None 60 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8956.2 chr17 + 3048 4 full-splice_match ALKBH5 ENST00000399138.4 2748 4 -314 14 no_subtype FALSE canonical NA NA 1326 None 15 9 0 FALSE 0 0 NA C coding 394 1182 320 1501 PB.10778.3 chr22 - 1782 4 genic_intron novelGene_400 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 75 None 2 9 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.10778.2 chr22 - 1799 4 genic_intron novelGene_400 novel NA NA NA NA no_subtype TRUE canonical NA NA 75 None 4 11 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.10778.1 chr22 + 6255 25 novel_in_catalog TNRC6B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5324 None 2 8 0 FALSE 0 0 NA C coding 1812 5436 274 5709 PB.6506.17 chr11 - 7235 26 novel_not_in_catalog NUMA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 235 None 5 6 0 TRUE 0 0 NA B coding 2101 6303 273 6575 PB.7722.1 chr14 - 2694 19 full-splice_match DLGAP5 ENST00000247191.6 2973 19 93 186 no_subtype FALSE canonical NA NA 123 None 28 7 0 FALSE 0 0 NA A coding 846 2538 125 2662 PB.798.1 chr1 + 1670 1 full-splice_match RP11-312J18.5 ENST00000425270.1 1097 1 -91 -482 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA C coding 185 555 634 1188 PB.8657.1 chr16 + 4050 12 full-splice_match CDH5 ENST00000341529.7 4120 12 61 9 no_subtype FALSE canonical NA NA 1924 None 3 10 0 FALSE 0 0 NA A coding 784 2352 88 2439 PB.5430.1 chr9 - 2851 17 novel_not_in_catalog EPB41L4B novel NA NA NA NA no_subtype FALSE canonical NA NA 102 None 4 7 1 TRUE 0 0 NA A coding 369 1107 244 1350 PB.1116.2 chr1 - 2701 1 incomplete-splice_match EGLN1 ENST00000366641.3 7097 5 4385 12 no_subtype FALSE canonical NA NA NA None 3 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10492.1 chr20 - 1526 8 novel_not_in_catalog RGS19 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 22 None 3 7 0 TRUE 0 0 NA B coding 217 651 223 873 PB.6062.1 chr10 - 1352 11 full-splice_match NSMCE4A ENST00000369023.7 1394 11 25 17 no_subtype FALSE canonical NA NA 319 None 11 0 0 FALSE 0 0 NA A coding 385 1155 28 1182 PB.3651.2 chr5 + 2665 10 novel_not_in_catalog CREBRF novel NA NA NA NA no_subtype FALSE canonical NA NA 2229 None 2 3 0 TRUE 0 0 NA B coding 639 1917 290 2206 PB.5820.2 chr10 - 2945 7 full-splice_match SAR1A ENST00000373241.8 2996 7 31 20 no_subtype FALSE canonical NA NA 80 None 173 17 0 FALSE 0 0 NA C coding 198 594 97 690 PB.10492.2 chr20 - 1443 7 novel_not_in_catalog RGS19 novel NA NA NA NA no_subtype FALSE canonical NA NA 72 None 7 10 0 TRUE 0 0 NA B coding 217 651 141 791 PB.4051.4 chr6 - 1557 9 novel_not_in_catalog ATG5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 134 None 2 5 1 TRUE 0 0 NA C coding 197 591 352 942 PB.9556.1 chr18 + 5829 5 novel_not_in_catalog C18orf25 novel NA NA NA NA no_subtype FALSE canonical NA NA 5383 None 2 36 1 TRUE 0 0 NA A coding 341 1023 273 1295 PB.1800.1 chr2 - 3814 16 full-splice_match TRAK2 ENST00000332624.7 6510 16 50 2646 no_subtype FALSE canonical NA NA 180 None 85 0 0 FALSE 0 0 NA C coding 914 2742 380 3121 PB.7021.1 chr12 + 982 4 full-splice_match ORMDL2 ENST00000243045.9 2141 4 125 1034 no_subtype FALSE canonical NA NA 396 None 4 3 0 FALSE 0 0 NA A coding 153 459 71 529 PB.85.1 chr1 - 6145 11 novel_not_in_catalog FBXO42 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 204 None 2 32 1 TRUE 0 0 NA C coding 717 2151 222 2372 PB.85.3 chr1 - 2626 10 full-splice_match FBXO42 ENST00000375592.7 6202 10 12 3564 no_subtype FALSE canonical NA NA 188 None 2 4 0 FALSE 0 0 NA C coding 717 2151 206 2356 PB.9198.1 chr17 - 1539 5 full-splice_match MRPL10 ENST00000351111.6 1725 5 -10 196 no_subtype FALSE canonical NA NA 68 None 79 3 0 FALSE 0 0 NA A coding 261 783 17 799 PB.9481.1 chr18 - 3746 21 novel_not_in_catalog PPP4R1 novel NA NA NA NA no_subtype FALSE canonical NA NA 86 None 6 7 0 TRUE 0 0 NA A coding 933 2799 80 2878 PB.6324.1 chr11 - 2635 1 genic_intron novelGene_474 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 14 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9481.2 chr18 - 2828 4 genic_intron novelGene_67 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 667 None 5 19 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.9.1 chr1 - 2172 11 novel_not_in_catalog MXRA8 novel NA NA NA NA no_subtype FALSE canonical NA NA 88 None 3 9 1 TRUE 0 0 NA A coding 442 1326 40 1365 PB.11075.2 chrX + 1979 14 full-splice_match CSTF2 ENST00000372972.6 1958 14 -9 -12 no_subtype FALSE canonical NA NA 1762 None 8 0 0 FALSE 0 0 NA C coding 577 1731 26 1756 PB.3506.2 chr5 + 5628 3 genic_intron novelGene_1172 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4290 None 2 68 0 FALSE 0 0 NA A coding 103 309 2496 2804 PB.3506.7 chr5 - 1592 1 genic_intron novelGene_1173 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3415.1 chr5 + 5670 16 novel_in_catalog APC novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2273 None 2 12 0 FALSE 0 0 NA B coding 1768 5304 367 5670 PB.11129.4 chrX - 1810 9 novel_in_catalog SEPT6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 89 None 3 2 0 FALSE 0 0 NA C coding 427 1281 60 1340 PB.11129.5 chrX - 1515 7 novel_in_catalog SEPT6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 82 None 2 2 0 FALSE 0 0 NA C coding 267 801 53 853 PB.2302.10 chr3 - 2962 1 genic_intron novelGene_671 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 14 0 FALSE 0 0 NA A coding 104 312 1025 1336 PB.947.1 chr1 + 3534 7 full-splice_match NR5A2 ENST00000236914.7 3115 7 80 -499 no_subtype FALSE canonical NA NA 1394 None 4 5 0 FALSE 0 0 NA A coding 495 1485 155 1639 PB.11129.1 chrX - 1750 11 novel_in_catalog SEPT6 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 83 None 12 3 0 FALSE 0 0 NA C coding 427 1281 54 1334 PB.11129.3 chrX - 2110 11 full-splice_match SEPT6 ENST00000394610.5 4694 11 207 2377 no_subtype FALSE canonical NA NA 88 None 22 2 0 FALSE 0 0 NA C coding 427 1281 59 1339 PB.3933.1 chr6 + 4200 22 novel_not_in_catalog PTK7 novel NA NA NA NA no_subtype TRUE canonical NA NA 3209 None 15 6 0 TRUE 0 0 NA A coding 1070 3210 158 3367 PB.8177.5 chr15 - 3052 9 novel_not_in_catalog AAGAB novel NA NA NA NA no_subtype FALSE canonical NA NA 99 None 4 14 1 TRUE 0 0 NA C coding 280 840 27 866 PB.10490.1 chr20 - 1812 15 full-splice_match UCKL1 ENST00000354216.10 1837 15 5 20 no_subtype FALSE canonical NA NA 151 None 5 6 0 FALSE 0 0 NA C coding 548 1644 39 1682 PB.3237.2 chr5 - 1668 11 full-splice_match PAIP1 ENST00000436644.6 1734 11 38 28 no_subtype FALSE canonical NA NA 237 None 10 5 0 FALSE 0 0 NA C coding 400 1200 210 1409 PB.8177.1 chr15 - 3317 11 novel_not_in_catalog AAGAB novel NA NA NA NA no_subtype FALSE canonical NA NA 99 None 8 12 1 TRUE 0 0 NA C coding 315 945 27 971 PB.8177.2 chr15 - 3318 12 novel_not_in_catalog AAGAB novel NA NA NA NA no_subtype TRUE canonical NA NA 99 None 2 15 1 TRUE 0 0 NA C coding 189 567 27 593 PB.3237.1 chr5 - 2872 1 novel_in_catalog PAIP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5560.2 chr9 - 3000 16 novel_in_catalog CRAT novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 308 None 8 10 0 FALSE 0 0 NA C coding 627 1881 519 2399 PB.1845.13 chr2 - 4087 25 incomplete-splice_match FN1 ENST00000421182.5 8103 45 3589 427 5prime_fragment FALSE canonical NA NA 24 None 2 7 0 FALSE 0 0 NA C coding 958 2874 523 3396 PB.2066.1 chr3 + 3097 1 genic_intron novelGene_291 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A coding 112 336 1387 1722 PB.6992.1 chr12 - 2682 8 full-splice_match RARG ENST00000338561.9 1836 8 -87 -759 no_subtype FALSE canonical NA NA 397 None 13 4 0 FALSE 0 0 NA A coding 443 1329 247 1575 PB.6727.11 chr11 + 2697 2 genic_intron novelGene_1095 novel NA NA NA NA no_subtype TRUE canonical NA NA 487 None 15 19 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.10617.1 chr22 - 1287 9 full-splice_match ATP6V1E1 ENST00000253413.9 1402 9 76 39 no_subtype FALSE canonical NA NA 140 None 10 3 0 FALSE 0 0 NA A coding 226 678 108 785 PB.1659.1 chr2 - 3746 6 full-splice_match CD302 ENST00000259053.5 3741 6 -11 6 no_subtype FALSE canonical NA NA 122 None 8 34 0 FALSE 0 0 NA A coding 232 696 56 751 PB.6630.1 chr11 - 2762 1 antisense novelGene_ACAT1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11116.1 chrX + 4079 21 novel_not_in_catalog WDR44 novel NA NA NA NA no_subtype TRUE canonical NA NA 3014 None 6 6 0 TRUE 0 0 NA A coding 913 2739 368 3106 PB.1875.2 chr2 + 1492 1 incomplete-splice_match DNAJB2 ENST00000336576.9 3176 9 1682 3 no_subtype FALSE canonical NA NA NA None 5 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5715.2 chr10 - 5929 3 genic_intron novelGene_259 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5649 None 2 41 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10023.1 chr19 - 1817 14 full-splice_match POU2F2 ENST00000389341.9 6901 14 74 5010 no_subtype FALSE canonical NA NA 21 None 4 4 0 FALSE 0 0 NA C coding 458 1374 9 1382 PB.10023.2 chr19 - 1907 14 full-splice_match POU2F2 ENST00000526816.6 3218 14 -19 1330 no_subtype FALSE canonical NA NA 63 None 6 4 0 FALSE 0 0 NA C coding 479 1437 36 1472 PB.10023.3 chr19 - 3801 3 full-splice_match POU2F2 ENST00000558596.4 191 3 -1754 -1856 no_subtype FALSE canonical NA NA 1820 None 3 14 0 FALSE 0 0 NA C coding 115 345 2149 2493 PB.6668.1 chr11 - 1568 2 antisense novelGene_CD3G_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 647 None 5 12 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.4119.2 chr6 + 2869 4 antisense novelGene_PTPRK_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1986 None 2 18 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.6668.2 chr11 - 1564 3 antisense novelGene_CD3G_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 645 None 2 13 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.11230.1 chrY + 937 1 full-splice_match PSMA6P1 ENST00000400275.2 741 1 -58 -138 no_subtype FALSE canonical NA NA NA None 3 0 0 FALSE 0 0 NA A coding 164 492 305 796 PB.8647.3 chr16 + 1990 8 novel_not_in_catalog USB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1020 None 2 16 0 TRUE 0 0 NA B coding 265 795 46 840 PB.8647.1 chr16 + 1901 8 novel_not_in_catalog USB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 931 None 3 14 0 TRUE 0 0 NA B coding 214 642 106 747 PB.2484.2 chr3 - 1168 3 full-splice_match ANAPC13 ENST00000354910.9 1209 3 34 7 no_subtype FALSE canonical NA NA 41 None 6 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1940.5 chr2 + 5663 5 novel_not_in_catalog LRRFIP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 5551 None 2 47 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.10162.2 chr19 + 2828 18 novel_not_in_catalog CNOT3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2457 None 37 5 0 FALSE 0 0 NA B coding 753 2259 295 2553 PB.10162.3 chr19 + 3085 17 novel_in_catalog CNOT3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2314 None 2 6 0 FALSE 0 0 NA B coding 735 2205 278 2482 PB.1878.1 chr2 + 1639 10 novel_not_in_catalog DES novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1588 None 2 0 0 TRUE 0 0 NA C coding 470 1410 87 1496 PB.532.1 chr1 - 5596 3 genic_intron novelGene_982 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 255 None 2 44 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4626.1 chr7 + 2251 10 full-splice_match CAPZA2 ENST00000361183.7 5182 10 135 2796 no_subtype FALSE canonical NA NA 724 None 119 5 0 FALSE 0 0 NA C coding 286 858 5 862 PB.6777.1 chr12 + 1219 9 novel_not_in_catalog CD9 novel NA NA NA NA no_subtype FALSE canonical NA NA 723 None 28 8 0 TRUE 0 0 NA A coding 228 684 103 786 PB.9561.1 chr18 + 1583 1 genic_intron novelGene_488 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4626.2 chr7 + 2920 13 novel_not_in_catalog CAPZA2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2688 None 4 14 1 TRUE 0 0 NA C coding 286 858 12 869 PB.10011.1 chr19 + 1737 9 full-splice_match BCKDHA ENST00000269980.6 2103 9 360 6 no_subtype FALSE canonical NA NA 1175 None 39 1 0 FALSE 0 0 NA C coding 445 1335 9 1343 PB.2616.2 chr3 + 4301 3 novel_not_in_catalog B3GNT5 novel NA NA NA NA no_subtype FALSE canonical NA NA 410 None 4 24 0 TRUE 0 0 NA B coding 336 1008 838 1845 PB.10040.1 chr19 + 3225 7 novel_not_in_catalog ZNF234 novel NA NA NA NA no_subtype FALSE canonical NA NA 483 None 2 5 0 TRUE 0 0 NA A coding 700 2100 249 2348 PB.2344.1 chr3 + 1635 2 full-splice_match TRMT10C ENST00000309922.6 1819 2 27 157 no_subtype FALSE canonical NA NA 115 None 8 5 0 FALSE 0 0 NA A coding 403 1209 128 1336 PB.10827.2 chr22 + 4327 3 novel_in_catalog TTC38 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 141 None 2 37 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3574.2 chr5 + 953 1 incomplete-splice_match SLC26A2 ENST00000286298.4 8080 3 5914 1214 no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3574.1 chr5 + 2902 2 novel_not_in_catalog SLC26A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1062 None 2 20 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.11232.1 chrY - 2760 1 genic_intron novelGene_109 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7250.1 chr12 - 1187 5 full-splice_match VPS29 ENST00000360579.11 1091 5 -12 -84 no_subtype FALSE canonical NA NA 63 None 3 5 0 FALSE 0 0 NA A coding 186 558 61 618 PB.3112.1 chr4 - 1846 10 full-splice_match PPID ENST00000307720.3 1823 10 -31 8 no_subtype FALSE canonical NA NA 224 None 23 5 0 FALSE 0 0 NA A coding 370 1110 140 1249 PB.10278.1 chr20 - 1951 9 novel_not_in_catalog ESF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 678 None 2 4 0 TRUE 0 0 NA A coding 635 1905 45 1949 PB.2622.1 chr3 - 1419 10 novel_not_in_catalog PARL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 162 None 2 10 2 TRUE 0 0 NA C coding 188 564 649 1212 PB.6327.1 chr11 - 3627 1 full-splice_match APLNR ENST00000606794.1 3609 1 -21 3 no_subtype FALSE canonical NA NA NA None 13 12 0 FALSE 0 0 NA A coding 380 1140 219 1358 PB.2185.2 chr3 - 1589 13 novel_not_in_catalog IMPDH2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 146 None 2 3 1 FALSE 0 0 NA C coding 498 1494 49 1542 PB.1751.1 chr2 + 1583 6 novel_in_catalog INPP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 848 None 2 1 0 FALSE 0 0 NA A coding 399 1197 208 1404 PB.9337.1 chr17 + 3061 2 genic_intron novelGene_683 novel NA NA NA NA no_subtype FALSE canonical NA NA 30 None 2 12 1 FALSE 0 0 NA A coding 141 423 2016 2438 PB.1546.1 chr2 + 2782 20 novel_not_in_catalog TMEM87B novel NA NA NA NA no_subtype FALSE canonical NA NA 1814 None 2 9 0 TRUE 0 0 NA A coding 555 1665 207 1871 PB.7756.1 chr14 + 2616 2 novel_in_catalog ZBTB1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 151 None 7 2 0 FALSE 0 0 NA A coding 713 2139 170 2308 PB.288.1 chr1 - 2106 11 full-splice_match TRIT1 ENST00000316891.9 2112 11 2 4 no_subtype FALSE canonical NA NA 187 None 5 10 1 FALSE 0 0 NA A coding 467 1401 14 1414 PB.4994.1 chr8 - 2502 12 novel_not_in_catalog IMPA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 70 None 3 8 3 TRUE 0 0 NA A coding 277 831 95 925 PB.1878.3 chr2 + 1677 10 novel_not_in_catalog DES novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1627 None 2 3 1 TRUE 0 0 NA C coding 470 1410 81 1490 PB.3562.1 chr5 + 2702 17 incomplete-splice_match RBM27 ENST00000265271.6 6451 21 5 3744 3prime_fragment FALSE canonical NA NA 2687 None 20 0 0 FALSE 0 0 NA B coding 847 2541 162 2702 PB.5709.4 chr10 - 2926 10 full-splice_match PIP4K2A ENST00000376573.8 3802 10 120 756 no_subtype FALSE canonical NA NA 253 None 4 28 0 FALSE 0 0 NA C coding 406 1218 110 1327 PB.5709.3 chr10 - 3094 8 novel_not_in_catalog PIP4K2A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 155 None 3 31 1 TRUE 0 0 NA C coding 252 756 126 881 PB.5709.1 chr10 - 1608 1 incomplete-splice_match PIP4K2A ENST00000376573.8 3802 10 2069 126 no_subtype FALSE canonical NA NA NA None 5 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1995.2 chr3 + 2987 2 novel_not_in_catalog VHL novel NA NA NA NA no_subtype TRUE non_canonical NA NA 19 None 2 18 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.3029.3 chr4 - 1801 9 novel_not_in_catalog CCNA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 165 None 2 2 1 TRUE 0 0 NA B coding 432 1296 237 1532 PB.3029.2 chr4 - 2719 11 novel_not_in_catalog CCNA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 213 None 17 17 3 TRUE 0 0 NA B coding 432 1296 285 1580 PB.9410.4 chr17 - 3418 14 novel_in_catalog CYTH1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 215 None 13 9 0 FALSE 0 0 NA C coding 400 1200 188 1387 PB.5360.6 chr9 - 4418 16 novel_not_in_catalog SEMA4D novel NA NA NA NA no_subtype FALSE canonical NA NA 121 None 2 8 0 TRUE 0 0 NA B coding 851 2553 398 2950 PB.5709.8 chr10 - 5843 3 novel_not_in_catalog PIP4K2A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4781 None 6 34 0 TRUE 0 0 NA C coding 161 483 4449 4931 PB.5709.9 chr10 - 2146 2 genic_intron novelGene_214 novel NA NA NA NA no_subtype FALSE canonical NA NA 1251 None 2 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9399.1 chr17 - 3373 3 antisense novelGene_SEPT9_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2075 None 2 22 1 FALSE 0 0 NA A coding 129 387 117 503 PB.3785.5 chr6 - 3291 22 full-splice_match FAM65B ENST00000538035.5 5389 22 104 1994 no_subtype FALSE canonical NA NA 111 None 131 1 0 FALSE 0 0 NA C coding 1047 3141 51 3191 PB.5729.2 chr10 + 3513 9 full-splice_match ZEB1 ENST00000361642.9 5990 9 44 2433 no_subtype FALSE canonical NA NA 2804 None 26 1 0 FALSE 0 0 NA C coding 1125 3375 20 3394 PB.5729.3 chr10 + 1492 7 incomplete-splice_match ZEB1 ENST00000320985.14 5423 9 91 3840 3prime_fragment FALSE canonical NA NA 809 None 13 0 0 FALSE 0 0 NA C coding 491 1473 20 1492 PB.3785.1 chr6 - 3712 24 novel_not_in_catalog FAM65B novel NA NA NA NA no_subtype FALSE canonical NA NA 110 None 8 2 0 TRUE 0 0 NA C coding 1047 3141 50 3190 PB.5729.6 chr10 + 2683 8 incomplete-splice_match ZEB1 ENST00000361642.9 5990 9 55 3252 3prime_fragment FALSE canonical NA NA 2612 None 2 1 0 FALSE 0 0 NA C coding 891 2673 9 2681 PB.11055.1 chrX + 5423 4 genic GPR174 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 565 None 2 41 0 FALSE 0 0 NA A coding 333 999 1122 2120 PB.5298.1 chr9 + 2551 11 novel_not_in_catalog ZCCHC7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1243 None 10 6 0 TRUE 0 0 NA B coding 542 1626 49 1674 PB.6753.3 chr12 - 3741 22 incomplete-splice_match KDM5A ENST00000399788.6 10763 28 -111 7133 internal_fragment FALSE canonical NA NA 639 None 52 7 0 FALSE 0 0 NA B coding 1089 3267 475 3741 PB.986.3 chr1 + 5464 17 full-splice_match ZC3H11A ENST00000545588.5 7979 17 2518 -3 no_subtype FALSE canonical NA NA 3483 None 12 16 0 FALSE 0 0 NA C coding 810 2430 1310 3739 PB.5298.2 chr9 + 3760 8 novel_not_in_catalog ZCCHC7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1022 None 2 16 0 TRUE 0 0 NA B coding 340 1020 75 1094 PB.5298.4 chr9 + 2568 4 novel_not_in_catalog ZCCHC7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1264 None 2 30 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.2763.1 chr4 + 3188 22 novel_not_in_catalog NCAPG novel NA NA NA NA no_subtype FALSE canonical NA NA 2981 None 24 3 0 TRUE 0 0 NA A coding 1015 3045 58 3102 PB.6753.5 chr12 - 2873 19 incomplete-splice_match KDM5A ENST00000399788.6 10763 28 760 7130 internal_fragment FALSE canonical NA NA 140 None 2 0 0 FALSE 0 0 NA B coding 912 2736 138 2873 PB.8232.2 chr15 - 2961 1 novel_in_catalog PEAK1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9643.3 chr19 + 2010 14 novel_not_in_catalog DAZAP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1073 None 6 11 0 TRUE 0 0 NA B coding 407 1221 23 1243 PB.9643.2 chr19 + 1661 13 novel_not_in_catalog DAZAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1105 None 5 4 0 TRUE 0 0 NA B coding 406 1218 58 1275 PB.9643.5 chr19 + 7454 6 novel_not_in_catalog DAZAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 6515 None 3 38 0 FALSE 0 0 NA B coding 173 519 6167 6685 PB.9643.4 chr19 + 2887 1 novel_in_catalog DAZAP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5458.1 chr9 + 2667 14 full-splice_match ZNF618 ENST00000288466.11 9109 14 27 6415 no_subtype TRUE canonical NA NA 1141 None 2 1 1 FALSE 0 0 NA C coding 861 2583 73 2655 PB.5404.1 chr9 - 1813 2 full-splice_match ALG2 ENST00000476832.1 1880 2 62 5 no_subtype FALSE canonical NA NA 348 None 16 6 0 FALSE 0 0 NA A coding 416 1248 1 1248 PB.9410.3 chr17 - 3170 14 novel_not_in_catalog CYTH1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 66 None 3 8 0 TRUE 0 0 NA C coding 361 1083 45 1127 PB.3870.1 chr6 - 2436 3 genic_intron novelGene_346 novel NA NA NA NA no_subtype FALSE canonical NA NA 1287 None 4 20 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.11212.1 chrX - 1780 9 full-splice_match FAM3A ENST00000447601.6 1800 9 13 7 no_subtype FALSE canonical NA NA 467 None 4 10 0 FALSE 0 0 NA C coding 230 690 455 1144 PB.10461.2 chr20 - 3689 20 novel_not_in_catalog PPP4R1L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 15 None 6 8 1 TRUE 0 0 NA B coding 438 1314 1424 2737 PB.5317.1 chr9 - 1678 8 novel_in_catalog PTAR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 120 None 7 1 0 FALSE 0 0 NA B coding 401 1203 35 1237 PB.8661.1 chr16 + 1515 7 full-splice_match CA7 ENST00000338437.6 1555 7 39 1 no_subtype TRUE canonical NA NA 742 None 68 1 0 FALSE 0 0 NA A coding 264 792 71 862 PB.1457.5 chr2 - 2619 14 novel_in_catalog IMMT novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 113 None 7 4 0 FALSE 0 0 NA B coding 741 2223 69 2291 PB.5317.5 chr9 - 1559 1 novel_in_catalog PTAR1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9752.1 chr19 + 1544 2 antisense novelGene_S1PR2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 890 None 2 13 1 FALSE 0 0 NA A coding 124 372 1158 1529 PB.10242.1 chr20 - 2758 20 novel_not_in_catalog ADAM33 novel NA NA NA NA no_subtype FALSE canonical NA NA 148 None 4 5 1 FALSE 0 0 NA B coding 418 1254 52 1305 PB.2912.2 chr4 + 1954 6 full-splice_match ENOPH1 ENST00000509635.5 1874 6 -55 -25 no_subtype FALSE canonical NA NA 854 None 2 13 0 FALSE 0 0 NA C coding 173 519 473 991 PB.10242.3 chr20 - 2919 21 novel_not_in_catalog ADAM33 novel NA NA NA NA no_subtype TRUE canonical NA NA 145 None 2 8 0 FALSE 0 0 NA B coding 767 2301 49 2349 PB.10242.2 chr20 - 2902 22 novel_not_in_catalog ADAM33 novel NA NA NA NA no_subtype FALSE canonical NA NA 145 None 16 5 0 FALSE 0 0 NA B coding 804 2412 49 2460 PB.5973.2 chr10 + 5471 20 novel_not_in_catalog SLF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3624 None 6 14 0 FALSE 0 0 NA A coding 1172 3516 142 3657 PB.10937.1 chrX - 2917 5 genic_intron novelGene_466 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1527 None 4 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8011.1 chr15 + 3087 7 full-splice_match CHP1 ENST00000334660.9 3329 7 229 13 no_subtype FALSE canonical NA NA 545 None 98 19 0 FALSE 0 0 NA A coding 195 585 12 596 PB.6258.1 chr11 + 3082 12 novel_not_in_catalog TCP11L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2748 None 4 10 1 TRUE 0 0 NA B coding 509 1527 46 1572 PB.6258.2 chr11 + 3248 12 novel_not_in_catalog TCP11L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2914 None 2 17 2 TRUE 0 0 NA B coding 509 1527 212 1738 PB.10461.1 chr20 - 3504 20 novel_not_in_catalog PPP4R1L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 19 None 11 5 0 FALSE 0 0 NA B coding 438 1314 1561 2874 PB.842.5 chr1 + 3974 5 novel_not_in_catalog RCSD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2373 None 2 41 2 TRUE 0 0 NA C coding 77 231 166 396 PB.8286.1 chr15 - 5706 2 antisense novelGene_ZNF710_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 627 None 2 48 1 FALSE 0 0 NA A coding 443 1329 3580 4908 PB.257.1 chr1 + 1634 6 full-splice_match AGO3 ENST00000397828.3 1035 6 157 -756 no_subtype FALSE canonical NA NA 846 None 5 6 0 FALSE 0 0 NA A coding 204 612 264 875 PB.1745.1 chr2 + 2395 6 full-splice_match ASNSD1 ENST00000260952.8 2450 6 53 2 no_subtype FALSE canonical NA NA 2006 None 2 5 0 FALSE 0 0 NA A coding 643 1929 361 2289 PB.4904.2 chr8 + 3025 21 novel_in_catalog HOOK3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2075 None 4 2 0 FALSE 0 0 NA C coding 675 2025 132 2156 PB.6078.1 chr10 + 2956 9 full-splice_match FAM175B ENST00000298492.5 2992 9 28 8 no_subtype FALSE canonical NA NA 795 None 35 6 0 FALSE 0 0 NA A coding 415 1245 18 1262 PB.88.1 chr1 - 2764 2 genic EIF1AXP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2524 None 2 24 1 FALSE 0 0 NA C coding 144 432 176 607 PB.4904.1 chr8 + 2601 22 full-splice_match HOOK3 ENST00000307602.8 14398 22 84 11713 no_subtype FALSE canonical NA NA 2132 None 21 2 0 FALSE 0 0 NA C coding 718 2154 117 2270 PB.3884.2 chr6 - 3490 14 novel_not_in_catalog STK38 novel NA NA NA NA no_subtype FALSE canonical NA NA 205 None 129 6 0 FALSE 0 0 NA B coding 444 1332 271 1602 PB.3556.3 chr5 + 3600 19 novel_in_catalog ARHGAP26 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1809 None 2 5 0 FALSE 0 0 NA C coding 567 1701 195 1895 PB.3556.1 chr5 + 3276 23 full-splice_match ARHGAP26 ENST00000378004.7 9200 23 99 5825 no_subtype FALSE canonical NA NA 2447 None 5 4 0 FALSE 0 0 NA C coding 759 2277 257 2533 PB.3884.6 chr6 - 2005 1 novel_in_catalog STK38 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3884.7 chr6 - 6110 9 novel_in_catalog STK38 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 259 None 2 39 1 FALSE 0 0 NA B coding 264 792 328 1119 PB.3556.5 chr5 + 3329 2 genic_intron novelGene_1198 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 28 None 21 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1878.4 chr2 + 1652 8 novel_in_catalog DES novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 874 None 5 1 0 FALSE 0 0 NA C coding 208 624 290 913 PB.6991.17 chr12 - 3182 14 novel_in_catalog ITGB7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 50 None 2 9 0 FALSE 0 0 NA C coding 586 1758 177 1934 PB.9768.1 chr19 + 1303 10 full-splice_match QTRT1 ENST00000250237.9 1317 10 3 11 no_subtype FALSE canonical NA NA 1066 None 2 2 0 FALSE 0 0 NA A coding 403 1209 8 1216 PB.6359.1 chr11 - 2698 6 novel_not_in_catalog VPS37C novel NA NA NA NA no_subtype FALSE canonical NA NA 68 None 7 7 0 TRUE 0 0 NA B coding 355 1065 75 1139 PB.1439.2 chr2 - 2867 8 novel_in_catalog SUCLG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 67 None 2 22 0 FALSE 0 0 NA C coding 358 1074 10 1083 PB.6359.3 chr11 - 2819 7 novel_not_in_catalog VPS37C novel NA NA NA NA no_subtype TRUE canonical NA NA 67 None 2 8 0 TRUE 0 0 NA B coding 355 1065 193 1257 PB.2711.1 chr4 - 2183 11 full-splice_match NELFA ENST00000411638.6 2199 11 7 9 no_subtype FALSE canonical NA NA 219 None 8 5 0 FALSE 0 0 NA A coding 528 1584 10 1593 PB.9387.2 chr17 - 3497 19 novel_in_catalog RHBDF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 63 None 39 5 0 FALSE 0 0 NA B coding 827 2481 283 2763 PB.10156.3 chr19 - 2498 4 novel_not_in_catalog ZNF611 novel NA NA NA NA no_subtype FALSE canonical NA NA 83 None 2 9 0 TRUE 0 0 NA A coding 705 2115 21 2135 PB.10156.2 chr19 - 2633 6 novel_not_in_catalog ZNF83 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 89 None 2 12 4 TRUE 0 0 NA A coding 318 954 519 1472 PB.9147.2 chr17 + 1757 1 incomplete-splice_match AOC3 ENST00000617500.4 2392 4 626 10 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.177.1 chr1 - 2104 7 full-splice_match GPATCH3 ENST00000361720.9 2123 7 17 2 no_subtype FALSE canonical NA NA 458 None 4 7 0 FALSE 0 0 NA C coding 525 1575 8 1582 PB.3015.1 chr4 + 2647 11 full-splice_match METTL14 ENST00000388822.9 6669 11 35 3987 no_subtype FALSE canonical NA NA 1198 None 32 16 0 FALSE 0 0 NA A coding 456 1368 133 1500 PB.177.2 chr1 - 2726 5 novel_in_catalog GPATCH3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 355 None 2 19 1 FALSE 0 0 NA C coding 292 876 262 1137 PB.8889.2 chr17 - 2964 15 full-splice_match DVL2 ENST00000005340.9 3018 15 52 2 no_subtype FALSE canonical NA NA 425 None 20 4 0 FALSE 0 0 NA C coding 736 2208 232 2439 PB.8889.1 chr17 - 2985 15 novel_in_catalog DVL2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 459 None 9 3 0 FALSE 0 0 NA C coding 732 2196 266 2461 PB.5111.2 chr8 + 1640 1 genic_intron novelGene_1087 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 11 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6837.1 chr12 + 3558 4 full-splice_match CREBL2 ENST00000228865.2 3754 4 189 7 no_subtype FALSE canonical NA NA 450 None 6 17 0 FALSE 0 0 NA A coding 120 360 93 452 PB.4371.4 chr7 + 2275 13 novel_not_in_catalog SEPT7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 989 None 2 12 0 TRUE 0 0 NA C coding 376 1128 49 1176 PB.4371.5 chr7 + 2314 14 novel_not_in_catalog SEPT7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1263 None 4 5 0 FALSE 0 0 NA C coding 384 1152 149 1300 PB.4371.6 chr7 + 3353 12 novel_in_catalog SEPT7 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 1125 None 2 13 0 FALSE 0 0 NA C coding 406 1218 49 1266 PB.6959.11 chr12 + 2740 1 novel_in_catalog TMBIM6 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.11142.2 chrX - 3482 28 incomplete-splice_match THOC2 ENST00000355725.8 4930 39 7 1441 internal_fragment FALSE canonical NA NA 98 None 2 0 0 FALSE 0 0 NA B coding 1151 3453 28 3480 PB.9305.21 chr17 - 3626 12 novel_not_in_catalog DDX5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 214 None 9 15 1 TRUE 0 0 NA C coding 406 1218 171 1388 PB.746.2 chr1 - 2774 14 novel_not_in_catalog CCT3 novel NA NA NA NA no_subtype FALSE canonical NA NA 94 None 2 6 0 FALSE 0 0 NA B coding 396 1188 64 1251 PB.9305.23 chr17 - 2942 10 novel_not_in_catalog DDX5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 20 None 2 12 2 TRUE 0 0 NA C coding 154 462 336 797 PB.4252.3 chr6 + 3153 4 novel_not_in_catalog CCR6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 256 None 2 15 0 TRUE 0 0 NA C coding 374 1122 248 1369 PB.7.3 chr1 - 2548 16 novel_in_catalog CPSF3L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 57 None 2 10 0 FALSE 0 0 NA C coding 518 1554 742 2295 PB.5307.1 chr9 + 2603 3 novel_not_in_catalog ALDH1B1 novel NA NA NA NA no_subtype FALSE canonical NA NA 74 None 7 6 0 TRUE 0 0 NA B coding 517 1551 76 1626 PB.7.1 chr1 - 2096 17 full-splice_match CPSF3L ENST00000435064.5 2148 17 48 4 no_subtype FALSE canonical NA NA 63 None 20 6 0 FALSE 0 0 NA C coding 600 1800 36 1835 PB.167.3 chr1 + 1470 3 novel_in_catalog DHDDS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 223 None 2 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3009.1 chr4 + 3504 3 novel_not_in_catalog ALPK1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1081 None 2 21 1 TRUE 0 0 NA B coding 117 351 1179 1529 PB.167.1 chr1 + 1452 9 novel_in_catalog DHDDS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 940 None 23 2 0 FALSE 0 0 NA B coding 334 1002 176 1177 PB.528.1 chr1 - 3444 10 full-splice_match SLC25A24 ENST00000565488.5 4271 10 34 793 no_subtype FALSE canonical NA NA 369 None 59 6 0 FALSE 0 0 NA C coding 477 1431 187 1617 PB.528.3 chr1 - 3439 12 novel_not_in_catalog SLC25A24 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 388 None 3 8 2 TRUE 0 0 NA C coding 477 1431 206 1636 PB.8005.1 chr15 + 2085 10 incomplete-splice_match SPINT1 ENST00000344051.8 3056 11 191 780 internal_fragment TRUE canonical NA NA 1427 None 5 2 0 FALSE 0 0 NA A coding 523 1569 62 1630 PB.8895.1 chr17 + 1235 6 full-splice_match EIF5A ENST00000336458.12 1511 6 271 5 no_subtype FALSE canonical NA NA 606 None 7 5 0 FALSE 0 0 NA A coding 154 462 131 592 PB.7870.1 chr14 - 2660 2 antisense novelGene_SLC24A4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1329 None 2 9 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3423.1 chr5 + 2918 1 genic_intron novelGene_1025 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 10 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11080.1 chrX - 1434 1 novel_in_catalog TIMM8A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A coding 98 294 61 354 PB.10777.8 chr22 + 2553 13 incomplete-splice_match TNRC6B ENST00000402203.5 3444 24 1315 -424 internal_fragment FALSE canonical NA NA 1622 None 3 6 0 FALSE 0 0 NA C coding 666 1998 10 2007 PB.1848.2 chr2 + 3130 19 novel_not_in_catalog SMARCAL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2820 None 2 5 2 TRUE 0 0 NA B coding 650 1950 1108 3057 PB.10832.1 chr22 - 1765 1 incomplete-splice_match CERK ENST00000216264.12 4450 13 2011 675 no_subtype FALSE canonical NA NA NA None 9 8 0 FALSE 0 0 NA C coding 201 603 251 853 PB.7033.6 chr12 - 3658 28 novel_in_catalog SMARCC2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 130 None 13 1 0 FALSE 0 0 NA C coding 1099 3297 20 3316 PB.2591.7 chr3 + 6185 4 genic_intron novelGene_1320 novel NA NA NA NA no_subtype FALSE canonical NA NA 3600 None 2 55 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.10725.1 chr22 - 5412 3 antisense novelGene_TOM1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2760 None 2 36 2 FALSE 0 0 NA A coding 118 354 4403 4756 PB.2834.1 chr4 - 5914 2 genic_intron novelGene_478 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4423 None 3 25 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7033.7 chr12 - 4394 27 novel_in_catalog SMARCC2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 139 None 2 19 1 FALSE 0 0 NA C coding 872 2616 1435 4050 PB.9568.1 chr18 + 2652 16 full-splice_match ME2 ENST00000321341.9 9100 16 78 6370 no_subtype FALSE canonical NA NA 1781 None 25 3 0 FALSE 0 0 NA A coding 584 1752 195 1946 PB.3424.1 chr5 - 2798 1 incomplete-splice_match PGGT1B ENST00000419445.5 9545 9 1936 4812 no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7153.3 chr12 - 1745 3 genic_intron novelGene_845 novel NA NA NA NA no_subtype FALSE canonical NA NA 1200 None 5 17 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.7153.2 chr12 + 1789 3 genic_intron novelGene_844 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 583 None 6 15 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.1718.1 chr2 - 1648 5 full-splice_match NFE2L2 ENST00000397062.7 2853 5 448 757 no_subtype FALSE canonical NA NA 152 None 14 1 0 FALSE 0 0 NA C coding 513 1539 108 1646 PB.10832.4 chr22 - 2609 4 incomplete-splice_match CERK ENST00000216264.12 4450 13 1165 676 5prime_fragment FALSE canonical NA NA 74 None 2 8 0 FALSE 0 0 NA C coding 142 426 134 559 PB.3348.1 chr5 - 1649 1 novel_in_catalog SERINC5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.494.1 chr1 + 4031 15 full-splice_match FNBP1L ENST00000370253.6 3889 15 -149 7 no_subtype FALSE canonical NA NA 1785 None 2 15 0 FALSE 0 0 NA A coding 547 1641 150 1790 PB.10344.2 chr20 - 1879 11 full-splice_match EDEM2 ENST00000374492.7 1919 11 25 15 no_subtype FALSE canonical NA NA 188 None 15 0 0 FALSE 0 0 NA C coding 578 1734 82 1815 PB.7672.2 chr14 + 2941 25 novel_in_catalog CTAGE5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2349 None 7 3 0 FALSE 0 0 NA C coding 813 2439 75 2513 PB.7672.1 chr14 + 2907 24 full-splice_match CTAGE5 ENST00000280083.7 3860 24 247 706 no_subtype FALSE canonical NA NA 2315 None 34 3 0 FALSE 0 0 NA C coding 804 2412 68 2479 PB.10344.1 chr20 - 1769 10 full-splice_match EDEM2 ENST00000374491.3 1756 10 -21 8 no_subtype FALSE canonical NA NA 189 None 2 2 0 FALSE 0 0 NA C coding 541 1623 83 1705 PB.10827.1 chr22 + 3321 15 novel_not_in_catalog TTC38 novel NA NA NA NA no_subtype FALSE canonical NA NA 2961 None 160 18 1 TRUE 0 0 NA B coding 469 1407 14 1420 PB.2814.4 chr4 + 2741 6 novel_not_in_catalog RHOH novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2534 None 6 4 0 TRUE 0 0 NA C coding 191 573 587 1159 PB.10827.3 chr22 + 3257 14 novel_not_in_catalog TTC38 novel NA NA NA NA no_subtype FALSE canonical NA NA 2892 None 3 21 1 TRUE 0 0 NA B coding 420 1260 19 1278 PB.3569.1 chr5 + 3208 1 novel_in_catalog CARMN novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 14 0 FALSE 0 0 NA C coding 141 423 982 1404 PB.2814.9 chr4 + 1602 2 novel_in_catalog RHOH novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 124 None 2 1 0 FALSE 0 0 NA C coding 191 573 334 906 PB.10731.2 chr22 - 1472 5 novel_not_in_catalog TXN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 54 None 2 9 0 FALSE 0 0 NA B coding 166 498 217 714 PB.1304.5 chr2 - 3948 1 novel_in_catalog THADA novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 34 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10731.1 chr22 - 1667 5 novel_not_in_catalog TXN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 264 None 2 13 0 TRUE 0 0 NA B coding 166 498 412 909 PB.5672.1 chr10 + 2380 6 full-splice_match GATA3 ENST00000346208.3 2654 6 -118 392 no_subtype FALSE canonical NA NA 1620 None 3 3 0 FALSE 0 0 NA A coding 443 1329 574 1902 PB.4111.1 chr6 + 1740 9 novel_not_in_catalog SMPDL3A novel NA NA NA NA no_subtype TRUE canonical NA NA 1115 None 62 3 0 TRUE 0 0 NA A coding 453 1359 72 1430 PB.1304.1 chr2 - 6109 39 novel_in_catalog THADA novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 82 None 8 6 0 FALSE 0 0 NA B coding 1953 5859 154 6012 PB.1861.3 chr2 + 1015 1 incomplete-splice_match CNOT9 ENST00000273064.10 4079 8 2406 659 no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3512.1 chr5 + 3965 15 novel_in_catalog MATR3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2901 None 17 6 1 FALSE 0 0 NA C coding 895 2685 265 2949 PB.7348.1 chr12 - 2952 4 novel_not_in_catalog VPS37B novel NA NA NA NA no_subtype FALSE canonical NA NA 89 None 17 16 0 TRUE 0 0 NA C coding 239 717 452 1168 PB.3451.1 chr5 + 1678 9 full-splice_match PRRC1 ENST00000296666.12 4699 9 62 2959 no_subtype FALSE canonical NA NA 1254 None 11 3 0 FALSE 0 0 NA C coding 445 1335 127 1461 PB.7348.3 chr12 - 2679 4 novel_not_in_catalog VPS37B novel NA NA NA NA no_subtype FALSE canonical NA NA 158 None 98 19 1 FALSE 0 0 NA C coding 105 315 48 362 PB.2128.1 chr3 - 2625 14 novel_not_in_catalog ANO10 novel NA NA NA NA no_subtype FALSE canonical NA NA 89 None 16 5 0 TRUE 0 0 NA B coding 660 1980 101 2080 PB.115.1 chr1 - 2642 1 incomplete-splice_match ECE1 ENST00000415912.6 5099 19 2450 8 no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA C coding 128 384 1800 2183 PB.7348.4 chr12 - 2710 4 novel_not_in_catalog VPS37B novel NA NA NA NA no_subtype FALSE canonical NA NA 183 None 2 20 0 FALSE 0 0 NA C coding 239 717 211 927 PB.115.2 chr1 - 2697 19 full-splice_match ECE1 ENST00000374893.10 2484 19 37 -250 no_subtype FALSE canonical NA NA 89 None 3 3 0 FALSE 0 0 NA C coding 770 2310 39 2348 PB.946.24 chr1 + 4319 32 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3235 None 3 15 0 TRUE 0 0 NA B coding 1145 3435 74 3508 PB.7316.1 chr12 + 4393 5 full-splice_match UNC119B ENST00000344651.4 4404 5 5 6 no_subtype FALSE canonical NA NA 678 None 7 18 0 FALSE 0 0 NA C coding 251 753 36 788 PB.20.1 chr1 + 2794 15 full-splice_match ARHGEF16 ENST00000378378.8 3061 15 261 6 no_subtype FALSE canonical NA NA 2134 None 13 6 0 FALSE 0 0 NA A coding 709 2127 145 2271 PB.3615.20 chr5 + 2615 3 novel_not_in_catalog CYFIP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2223 None 3 11 1 FALSE 0 0 NA C coding 122 366 1560 1925 PB.850.1 chr1 + 2219 6 novel_not_in_catalog ATP1B1 novel NA NA NA NA no_subtype FALSE canonical NA NA 794 None 17 4 1 FALSE 0 0 NA A coding 194 582 143 724 PB.946.21 chr1 + 2491 26 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE canonical NA NA 2453 None 2 2 0 TRUE 0 0 NA B coding 801 2403 87 2489 PB.8071.1 chr15 + 1432 1 antisense novelGene_SECISBP2L_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10777.5 chr22 + 5873 22 novel_in_catalog TNRC6B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5154 None 3 4 0 FALSE 0 0 NA C coding 1776 5328 212 5539 PB.30.1 chr1 - 3060 8 novel_not_in_catalog TNFRSF25 novel NA NA NA NA no_subtype FALSE canonical NA NA 713 None 2 20 1 TRUE 0 0 NA A coding 177 531 2268 2798 PB.9675.1 chr19 - 2798 1 incomplete-splice_match PIP5K1C ENST00000335312.7 5080 18 2282 1 no_subtype FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA A coding 206 618 1223 1840 PB.6040.1 chr10 + 5636 17 full-splice_match FAM160B1 ENST00000369248.8 5810 17 166 8 no_subtype FALSE canonical NA NA 2361 None 14 25 0 FALSE 0 0 NA A coding 765 2295 170 2464 PB.2128.4 chr3 - 3486 12 novel_in_catalog ANO10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 44 None 2 10 0 FALSE 0 0 NA B coding 650 1950 56 2005 PB.10539.4 chr21 + 4114 1 full-splice_match SON ENST00000290239.7 67 1 -148 -3899 no_subtype FALSE canonical NA NA NA None 4 0 0 FALSE 0 0 NA C coding 1338 4014 99 4112 PB.10539.5 chr21 + 7483 10 incomplete-splice_match SON ENST00000356577.8 8813 12 1324 6 internal_fragment FALSE canonical NA NA 6372 None 2 13 0 FALSE 0 0 NA C coding 2137 6411 19 6429 PB.10539.6 chr21 + 3383 10 full-splice_match SON ENST00000436227.5 5269 10 1879 7 no_subtype FALSE canonical NA NA 2326 None 7 6 0 FALSE 0 0 NA C coding 819 2457 26 2482 PB.2853.1 chr4 + 1357 4 full-splice_match REST ENST00000619101.4 7114 4 97 5660 no_subtype TRUE canonical NA NA 1021 None 7 0 0 FALSE 0 0 NA C coding 439 1317 40 1356 PB.10539.1 chr21 + 5695 3 incomplete-splice_match SON ENST00000300278.8 7477 7 41 1741 3prime_fragment FALSE canonical NA NA 232 None 8 0 0 FALSE 0 0 NA C coding 1709 5127 568 5694 PB.10539.2 chr21 + 3423 2 novel_in_catalog SON novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3327 None 2 28 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10539.3 chr21 + 1418 1 novel_in_catalog SON novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.440.2 chr1 - 4299 25 novel_not_in_catalog USP33 novel NA NA NA NA no_subtype FALSE canonical NA NA 188 None 4 8 1 TRUE 0 0 NA B coding 911 2733 240 2972 PB.5901.1 chr10 + 2887 2 full-splice_match IFIT2 ENST00000371826.3 3489 2 94 508 no_subtype FALSE canonical NA NA 80 None 449 13 0 FALSE 0 0 NA C coding 472 1416 76 1491 PB.5901.2 chr10 + 3905 6 fusion IFIT3,IFIT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3525 None 2 5 0 TRUE 0 0 NA A coding 472 1416 77 1492 PB.440.1 chr1 - 4259 25 novel_not_in_catalog USP33 novel NA NA NA NA no_subtype FALSE canonical NA NA 172 None 7 4 0 TRUE 0 0 NA B coding 903 2709 224 2932 PB.6343.1 chr11 - 3960 2 genic MPEG1 novel NA NA NA NA no_subtype FALSE canonical NA NA 120 None 5 19 1 FALSE 0 0 NA C coding 716 2148 181 2328 PB.10904.2 chrX + 1650 12 full-splice_match PDK3 ENST00000441463.2 1921 12 -197 468 no_subtype FALSE canonical NA NA 1414 None 3 0 0 FALSE 0 0 NA C coding 415 1245 198 1442 PB.6343.3 chr11 - 3946 2 genic MPEG1 novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 2 19 1 FALSE 0 0 NA C coding 716 2148 164 2311 PB.6343.2 chr11 - 2476 1 full-splice_match MPEG1 ENST00000361050.3 4442 1 82 1884 no_subtype FALSE canonical NA NA NA None 111 3 0 FALSE 0 0 NA C coding 716 2148 5 2152 PB.8136.5 chr15 - 6089 34 incomplete-splice_match HERC1 ENST00000443617.6 15137 78 9041 7 5prime_fragment FALSE canonical NA NA 217 None 2 0 0 FALSE 0 0 NA B coding 1867 5601 30 5630 PB.8136.4 chr15 - 3613 19 novel_in_catalog HERC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 176 None 2 0 0 FALSE 0 0 NA B coding 1016 3048 105 3152 PB.10421.1 chr20 - 3162 8 full-splice_match NCOA5 ENST00000290231.10 3220 8 39 19 no_subtype FALSE canonical NA NA 97 None 12 8 0 FALSE 0 0 NA C coding 579 1737 127 1863 PB.10904.3 chrX + 2804 12 novel_not_in_catalog PDK3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1229 None 2 7 0 TRUE 0 0 NA C coding 406 1218 153 1370 PB.1652.3 chr2 + 3118 1 novel_in_catalog GPD2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA B coding 18 54 278 331 PB.7143.1 chr12 - 1742 1 antisense novelGene_TMTC3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1652.1 chr2 + 2685 7 novel_not_in_catalog GPD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1967 None 4 8 1 TRUE 0 0 NA B coding 222 666 169 834 PB.9640.3 chr19 + 2724 4 incomplete-splice_match MIDN ENST00000300952.6 3790 8 1056 10 internal_fragment FALSE canonical NA NA 588 None 2 25 0 FALSE 0 0 NA B coding 235 705 159 863 PB.5834.2 chr10 - 1464 10 novel_not_in_catalog ASCC1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 179 None 3 4 1 TRUE 0 0 NA A coding 357 1071 183 1253 PB.1324.1 chr2 - 1078 6 full-splice_match CALM2 ENST00000272298.11 1302 6 90 134 no_subtype FALSE canonical NA NA 71 None 50 1 0 FALSE 0 0 NA A coding 149 447 69 515 PB.2170.1 chr3 - 1524 4 novel_in_catalog CCDC51 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 41 None 2 2 0 FALSE 0 0 NA C coding 411 1233 50 1282 PB.1636.2 chr2 + 3040 2 genic_intron novelGene_1228 novel NA NA NA NA no_subtype FALSE canonical NA NA 2705 None 4 18 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.6653.6 chr11 + 1671 2 full-splice_match REXO2 ENST00000543243.1 552 2 8 -1127 no_subtype FALSE canonical NA NA 173 None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.208.1 chr1 + 5707 18 novel_in_catalog EPB41 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2499 None 16 27 0 FALSE 0 0 NA B coding 601 1803 688 2490 PB.208.2 chr1 + 5779 19 novel_in_catalog EPB41 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2574 None 26 29 0 FALSE 0 0 NA B coding 622 1866 700 2565 PB.208.3 chr1 + 2830 13 novel_not_in_catalog EPB41 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2163 None 2 7 0 TRUE 0 0 NA B coding 426 1278 705 1982 PB.208.4 chr1 + 5633 17 novel_in_catalog EPB41 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2414 None 3 30 0 FALSE 0 0 NA B coding 567 1701 705 2405 PB.208.5 chr1 + 6189 20 novel_not_in_catalog EPB41 novel NA NA NA NA no_subtype FALSE canonical NA NA 2980 None 2 33 2 FALSE 0 0 NA B coding 759 2277 695 2971 PB.208.6 chr1 + 5713 18 novel_in_catalog EPB41 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2498 None 13 27 0 FALSE 0 0 NA B coding 810 2430 60 2489 PB.208.7 chr1 + 5730 17 novel_in_catalog EPB41 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2515 None 5 27 0 FALSE 0 0 NA B coding 767 2301 206 2506 PB.208.8 chr1 + 2950 13 novel_not_in_catalog EPB41 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2293 None 2 10 0 TRUE 0 0 NA B coding 635 1905 208 2112 PB.208.9 chr1 + 5763 17 novel_in_catalog EPB41 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2538 None 2 27 0 FALSE 0 0 NA B coding 776 2328 202 2529 PB.4718.9 chr7 + 3212 2 antisense novelGene_KIAA1147_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3119 None 6 12 0 FALSE 0 0 NA B coding 111 333 1692 2024 PB.2170.2 chr3 - 1638 4 full-splice_match CCDC51 ENST00000395694.6 1560 4 -87 9 no_subtype FALSE canonical NA NA 165 None 5 1 0 FALSE 0 0 NA C coding 411 1233 174 1406 PB.2510.1 chr3 + 3649 17 novel_not_in_catalog PLS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1865 None 34 21 0 FALSE 0 0 NA C coding 629 1887 112 1998 PB.1894.1 chr2 - 2671 2 genic_intron novelGene_1405 novel NA NA NA NA no_subtype FALSE canonical NA NA 274 None 2 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4744.1 chr7 - 2925 4 novel_not_in_catalog GIMAP6 novel NA NA NA NA no_subtype FALSE canonical NA NA 186 None 374 9 1 TRUE 0 0 NA B coding 292 876 187 1062 PB.4729.3 chr7 + 2913 21 novel_in_catalog CUL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2412 None 215 1 0 FALSE 0 0 NA B coding 776 2328 163 2490 PB.5319.1 chr9 + 5906 24 novel_in_catalog SMC5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 3231 None 5 17 0 FALSE 0 0 NA A coding 1086 3258 112 3369 PB.741.6 chr1 + 4043 9 novel_in_catalog LMNA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2401 None 3 21 0 FALSE 0 0 NA C coding 396 1188 206 1393 PB.5319.3 chr9 + 1535 1 genic_intron novelGene_662 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.309.1 chr1 - 2574 10 full-splice_match SLC2A1 ENST00000426263.7 3667 10 305 788 no_subtype FALSE canonical NA NA 235 None 3 2 0 FALSE 0 0 NA A coding 492 1476 218 1693 PB.7916.4 chr14 - 1386 3 full-splice_match DEGS2 ENST00000305631.6 4352 3 500 2466 no_subtype FALSE canonical NA NA 158 None 8 2 0 FALSE 0 0 NA C coding 323 969 77 1045 PB.7916.2 chr14 - 3621 6 novel_not_in_catalog DEGS2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 157 None 13 24 1 TRUE 0 0 NA C coding 323 969 76 1044 PB.7916.3 chr14 - 2862 5 novel_not_in_catalog DEGS2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 158 None 13 22 1 TRUE 0 0 NA C coding 132 396 781 1176 PB.1588.1 chr2 - 2701 1 incomplete-splice_match FAM168B ENST00000409185.5 5285 7 2581 4 no_subtype FALSE canonical NA NA NA None 6 29 0 FALSE 0 0 NA C coding 102 306 272 577 PB.7916.1 chr14 + 3452 1 novel_in_catalog EVL novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA C coding 171 513 2299 2811 PB.5218.1 chr9 + 2676 8 novel_in_catalog IL33 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 667 None 61 14 0 FALSE 0 0 NA B coding 270 810 56 865 PB.8700.1 chr16 + 3066 12 novel_in_catalog CDH1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 1835 None 11 4 0 FALSE 0 0 NA B coding 706 2118 125 2242 PB.5218.3 chr9 + 2584 7 novel_in_catalog IL33 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 575 None 3 14 0 FALSE 0 0 NA B coding 175 525 56 580 PB.5218.2 chr9 + 2654 8 novel_not_in_catalog IL33 novel NA NA NA NA no_subtype FALSE canonical NA NA 647 None 8 22 0 FALSE 0 0 NA B coding 155 465 381 845 PB.9263.1 chr17 + 3213 5 genic_intron novelGene_563 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3037 None 2 12 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.3131.1 chr4 + 2700 1 genic_intron novelGene_1330 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5246.1 chr9 + 4441 23 novel_in_catalog TEK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3438 None 6 9 1 FALSE 0 0 NA A coding 1123 3369 142 3510 PB.2510.4 chr3 + 3580 15 novel_in_catalog PLS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1792 None 12 18 0 FALSE 0 0 NA C coding 629 1887 39 1925 PB.864.1 chr1 + 2591 9 novel_not_in_catalog METTL13 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2133 None 2 3 1 TRUE 0 0 NA A coding 699 2097 309 2405 PB.2065.1 chr3 + 2798 1 incomplete-splice_match RBMS3 ENST00000434693.6 8540 15 5727 16 no_subtype FALSE canonical NA NA NA None 8 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5139.8 chr8 - 3255 16 novel_in_catalog TRAPPC9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 81 None 2 2 0 FALSE 0 0 NA B coding 818 2454 92 2545 PB.1924.10 chr2 + 3832 19 incomplete-splice_match INPP5D ENST00000445964.5 4845 27 1008 5 internal_fragment FALSE canonical NA NA 2640 None 2 3 0 FALSE 0 0 NA B coding 876 2628 13 2640 PB.8363.1 chr16 - 3450 19 novel_not_in_catalog UNKL novel NA NA NA NA no_subtype TRUE canonical NA NA 106 None 2 20 1 TRUE 0 0 NA A coding 733 2199 30 2228 PB.4362.3 chr7 - 1778 10 full-splice_match NT5C3A ENST00000456458.5 1742 10 -40 4 no_subtype FALSE canonical NA NA 269 None 4 6 0 FALSE 0 0 NA C coding 297 891 289 1179 PB.5139.1 chr8 - 4278 23 novel_not_in_catalog TRAPPC9 novel NA NA NA NA no_subtype FALSE canonical NA NA 130 None 6 1 0 TRUE 0 0 NA B coding 1139 3417 141 3557 PB.579.1 chr1 + 1432 2 genic_intron novelGene_1009 novel NA NA NA NA no_subtype FALSE canonical NA NA 1350 None 2 22 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5968.2 chr10 - 1508 5 full-splice_match BLOC1S2 ENST00000614731.4 2634 5 -300 1426 no_subtype FALSE canonical NA NA 378 None 3 6 0 FALSE 0 0 NA C coding 99 297 453 749 PB.5139.5 chr8 - 4268 24 novel_not_in_catalog TRAPPC9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 100 None 12 5 1 TRUE 0 0 NA B coding 990 2970 111 3080 PB.10221.1 chr20 + 1488 1 genic_intron novelGene_13 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9812.1 chr19 + 2896 2 antisense novelGene_CTC-250I14.6_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 677 None 2 17 1 FALSE 0 0 NA A coding 223 669 1182 1850 PB.1225.4 chr2 + 2588 2 incomplete-splice_match GAREM2 ENST00000401533.6 4161 6 1570 3 internal_fragment FALSE canonical NA NA 158 None 2 12 0 FALSE 0 0 NA A coding 11 33 1150 1182 PB.9812.2 chr19 + 1847 1 full-splice_match IER2 ENST00000588173.1 2934 1 1080 7 no_subtype FALSE canonical NA NA NA None 272 12 0 FALSE 0 0 NA A coding 223 669 133 801 PB.1225.1 chr2 + 2373 18 fusion HADHB,GAREM2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1829 None 5 7 2 TRUE 0 0 NA A coding 474 1422 441 1862 PB.7646.1 chr14 + 2122 25 full-splice_match SCFD1 ENST00000458591.6 2359 25 216 21 no_subtype FALSE canonical NA NA 1916 None 5 7 0 FALSE 0 0 NA A coding 642 1926 12 1937 PB.10672.4 chr22 - 3122 7 novel_not_in_catalog GUCD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 159 None 77 17 0 TRUE 0 0 NA B coding 239 717 117 833 PB.1924.14 chr2 + 2732 10 novel_not_in_catalog INPP5D novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1552 None 2 14 2 TRUE 0 0 NA B coding 493 1479 74 1552 PB.10672.1 chr22 - 3285 7 novel_not_in_catalog GUCD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 321 None 36 19 0 TRUE 0 0 NA B coding 295 885 111 995 PB.10672.3 chr22 - 2901 7 novel_not_in_catalog GUCD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 175 None 2 19 1 TRUE 0 0 NA B coding 137 411 133 543 PB.1310.1 chr2 + 3269 4 genic_intron novelGene_439 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3182 None 2 21 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.1084.1 chr1 - 1601 7 full-splice_match PYCR2 ENST00000343818.10 1689 7 85 3 no_subtype FALSE canonical NA NA 131 None 3 6 0 FALSE 0 0 NA A coding 320 960 65 1024 PB.3247.1 chr5 + 2942 2 genic_intron novelGene_530 novel NA NA NA NA no_subtype FALSE canonical NA NA 2866 None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2053.1 chr3 + 778 4 novel_not_in_catalog RPL15 novel NA NA NA NA no_subtype FALSE canonical NA NA 429 None 10 0 0 FALSE 0 0 NA C coding 204 612 121 732 PB.232.1 chr1 + 1912 5 full-splice_match ZBTB8A ENST00000373510.8 7075 5 15 5148 no_subtype FALSE canonical NA NA 1207 None 2 3 0 FALSE 0 0 NA A coding 441 1323 215 1537 PB.10160.8 chr19 - 3431 9 novel_in_catalog NLRP12 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 477 None 5 2 0 FALSE 0 0 NA B coding 1033 3099 189 3287 PB.6935.1 chr12 - 2443 5 novel_not_in_catalog ASB8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 36 None 2 11 1 TRUE 0 0 NA B coding 288 864 70 933 PB.6935.2 chr12 - 1566 5 novel_not_in_catalog ASB8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 46 None 7 2 0 TRUE 0 0 NA B coding 288 864 80 943 PB.2903.1 chr4 + 3263 1 incomplete-splice_match BMP2K ENST00000502613.1 6902 9 3626 14 no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3744.1 chr6 + 1375 5 full-splice_match EDN1 ENST00000379375.5 2033 5 -2 660 no_subtype FALSE canonical NA NA 802 None 4 10 0 FALSE 0 0 NA A coding 212 636 270 905 PB.10285.1 chr20 + 3424 11 novel_not_in_catalog KAT14 novel NA NA NA NA no_subtype FALSE canonical NA NA 2675 None 29 13 0 FALSE 0 0 NA A coding 781 2343 504 2846 PB.4702.2 chr7 - 1469 1 genic_intron novelGene_1174 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9202.1 chr17 - 2772 2 genic PRR15L novel NA NA NA NA no_subtype TRUE canonical NA NA 2688 None 2 13 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.9202.2 chr17 - 1520 2 full-splice_match PRR15L ENST00000300557.2 1519 2 -5 4 no_subtype FALSE canonical NA NA 227 None 16 4 0 FALSE 0 0 NA C coding 103 309 257 565 PB.9202.3 chr17 - 2775 1 genic PRR15L novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 35 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1588.2 chr2 - 5424 7 full-splice_match FAM168B ENST00000389915.3 944 7 8 -4488 no_subtype FALSE canonical NA NA 239 None 6 29 0 FALSE 0 0 NA C coding 195 585 251 835 PB.10172.1 chr19 - 1502 8 full-splice_match HSPBP1 ENST00000433386.6 1572 8 66 4 no_subtype FALSE canonical NA NA 77 None 28 2 0 FALSE 0 0 NA A coding 359 1077 172 1248 PB.5222.1 chr9 + 1747 2 full-splice_match LURAP1L ENST00000319264.3 1753 2 2 4 no_subtype FALSE canonical NA NA 1005 None 4 3 0 FALSE 0 0 NA A coding 228 684 694 1377 PB.11104.2 chrX + 2568 4 full-splice_match NXT2 ENST00000372106.5 2562 4 -13 7 no_subtype FALSE canonical NA NA 391 None 4 10 0 FALSE 0 0 NA C coding 142 426 145 570 PB.5608.1 chr9 + 2131 1 full-splice_match LINC00094 ENST00000599836.1 1689 1 1534 -1976 no_subtype FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3852.9 chr6 - 2647 2 full-splice_match ZBTB22 ENST00000431845.2 2651 2 -2 6 no_subtype FALSE canonical NA NA 85 None 4 6 0 FALSE 0 0 NA A coding 634 1902 155 2056 PB.3439.1 chr5 + 2019 15 full-splice_match SNX2 ENST00000379516.6 2128 15 100 9 no_subtype FALSE canonical NA NA 1517 None 123 3 0 FALSE 0 0 NA A coding 519 1557 9 1565 PB.10820.1 chr22 + 4483 8 full-splice_match NUP50 ENST00000347635.8 5233 8 152 598 no_subtype FALSE canonical NA NA 1518 None 8 38 0 FALSE 0 0 NA A coding 440 1320 399 1718 PB.2978.9 chr4 + 2679 3 genic_intron novelGene_930 novel NA NA NA NA no_subtype FALSE canonical NA NA 1551 None 2 13 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.3554.1 chr5 + 956 8 full-splice_match NDFIP1 ENST00000253814.5 3851 8 319 2576 no_subtype TRUE canonical NA NA 819 None 85 1 0 FALSE 0 0 NA A coding 221 663 152 814 PB.3852.3 chr6 - 3104 9 novel_not_in_catalog TAPBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 57 None 240 19 0 TRUE 0 0 NA C coding 448 1344 21 1364 PB.9306.1 chr17 + 2704 20 full-splice_match CEP95 ENST00000556440.6 3139 20 432 3 no_subtype FALSE canonical NA NA 2367 None 8 5 1 FALSE 0 0 NA A coding 821 2463 79 2541 PB.3852.1 chr6 - 1563 8 novel_not_in_catalog TAPBP novel NA NA NA NA no_subtype FALSE canonical NA NA 58 None 2 1 0 FALSE 0 0 NA C coding 455 1365 22 1386 PB.48.2 chr1 - 1545 1 incomplete-splice_match CLSTN1 ENST00000477264.1 2169 4 625 0 no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3852.7 chr6 - 1433 8 full-splice_match TAPBP ENST00000434618.6 3759 8 324 2002 no_subtype FALSE canonical NA NA 59 None 4 0 0 FALSE 0 0 NA C coding 448 1344 23 1366 PB.3852.6 chr6 + 1874 11 antisense novelGene_TAPBP_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1752 None 2 26 3 FALSE 0 0 NA B non_coding NA NA NA NA PB.3852.5 chr6 - 1846 10 genic TAPBP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 122 None 3 15 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.3852.4 chr6 - 2119 14 genic TAPBP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 252 None 2 21 4 TRUE 0 0 NA C non_coding NA NA NA NA PB.7959.263 chr14 - 1548 5 novel_not_in_catalog IGHM novel NA NA NA NA no_subtype FALSE canonical NA NA 72 None 2 7 0 TRUE 0 0 NA B coding 472 1416 11 1426 PB.8752.1 chr16 + 2830 3 novel_not_in_catalog TERF2IP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1605 None 2 23 0 TRUE 0 0 NA C coding 147 441 1567 2007 PB.8689.1 chr16 - 1930 1 full-splice_match DDX28 ENST00000332395.6 2169 1 212 27 no_subtype FALSE canonical NA NA NA None 10 3 0 FALSE 0 0 NA A coding 540 1620 29 1648 PB.7959.260 chr14 - 1893 10 fusion IGHM,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 9 3 TRUE 0 0 NA B coding 375 1125 647 1771 PB.7959.267 chr14 - 1598 5 novel_not_in_catalog IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 117 None 4 3 0 TRUE 0 0 NA B coding 375 1125 353 1477 PB.7959.266 chr14 - 1921 11 fusion IGHV4-39,IGHM,IGHV3-21 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 57 None 2 8 3 TRUE 0 0 NA A coding 375 1125 676 1800 PB.7959.265 chr14 - 1917 8 fusion IGHV4-34,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 81 None 2 9 1 TRUE 0 0 NA B coding 375 1125 672 1796 PB.7959.264 chr14 - 1952 8 fusion IGHV1-18,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 100 None 2 10 1 TRUE 0 0 NA A coding 375 1125 706 1830 PB.10412.1 chr20 + 3081 3 full-splice_match SNX21 ENST00000344780.4 3106 3 25 0 no_subtype FALSE canonical NA NA 444 None 6 16 0 FALSE 0 0 NA A coding 184 552 565 1116 PB.7959.268 chr14 - 1907 10 fusion IGHM,IGHV4-39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 3 9 4 TRUE 0 0 NA B coding 375 1125 662 1786 PB.1716.1 chr2 + 1482 11 novel_not_in_catalog HNRNPA3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1115 None 34 1 0 FALSE 0 0 NA A coding 311 933 165 1097 PB.10573.10 chr21 + 1499 10 novel_not_in_catalog MX1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1146 None 4 4 1 TRUE 0 0 NA B coding 354 1062 218 1279 PB.10573.11 chr21 + 5610 15 novel_not_in_catalog MX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 4936 None 2 29 0 TRUE 0 0 NA B coding 273 819 4343 5161 PB.10573.12 chr21 + 2718 17 novel_not_in_catalog MX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2040 None 2 6 0 TRUE 0 0 NA B coding 662 1986 280 2265 PB.10573.13 chr21 + 2634 16 novel_not_in_catalog MX1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1956 None 3 8 1 TRUE 0 0 NA B coding 662 1986 196 2181 PB.10573.14 chr21 + 2630 15 novel_not_in_catalog MX1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1952 None 2 10 2 TRUE 0 0 NA B coding 661 1983 195 2177 PB.5361.17 chr9 + 2947 2 novel_in_catalog SYK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 150 None 2 9 0 FALSE 0 0 NA C coding 180 540 192 731 PB.5361.14 chr9 + 4275 16 novel_not_in_catalog SYK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3287 None 5 10 1 TRUE 0 0 NA C coding 635 1905 203 2107 PB.5553.1 chr9 - 1735 12 novel_in_catalog KYAT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 60 None 7 3 0 FALSE 0 0 NA A coding 422 1266 8 1273 PB.1629.1 chr2 + 2818 1 genic_intron novelGene_1217 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 14 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5361.19 chr9 + 6463 1 genic_intron novelGene_834 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 29 0 FALSE 0 0 NA B coding 146 438 4621 5058 PB.11015.1 chrX + 4303 33 novel_not_in_catalog KIF4A novel NA NA NA NA no_subtype TRUE canonical NA NA 3544 None 2 9 0 TRUE 0 0 NA A coding 1232 3696 50 3745 PB.2585.1 chr3 - 2816 1 novel_in_catalog TNIK novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7137.1 chr12 + 4204 17 novel_not_in_catalog ACSS3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2036 None 2 23 0 TRUE 0 0 NA A coding 686 2058 42 2099 PB.2913.2 chr4 - 2547 8 full-splice_match TMEM150C ENST00000449862.6 1990 8 215 -772 no_subtype TRUE canonical NA NA 94 None 15 10 0 FALSE 0 0 NA A coding 249 747 105 851 PB.4718.11 chr7 - 3247 2 novel_not_in_catalog RP5-894A10.2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 133 None 3 9 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.6500.1 chr11 + 4220 6 novel_not_in_catalog CCND1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1783 None 4 10 1 TRUE 0 0 NA B coding 295 885 159 1043 PB.6444.1 chr11 + 2944 4 full-splice_match OVOL1 ENST00000335987.7 3034 4 77 13 no_subtype FALSE canonical NA NA 783 None 30 8 0 FALSE 0 0 NA A coding 267 801 276 1076 PB.6971.2 chr12 + 2539 7 full-splice_match ATF1 ENST00000262053.7 2181 7 -208 -150 no_subtype TRUE canonical NA NA 901 None 2 16 0 FALSE 0 0 NA C coding 271 813 231 1043 PB.1629.2 chr2 + 857 2 genic_intron novelGene_1217 novel NA NA NA NA no_subtype FALSE canonical NA NA 636 None 4 10 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.4401.1 chr7 + 4083 21 full-splice_match AEBP1 ENST00000223357.7 4081 21 -5 3 no_subtype TRUE canonical NA NA 3119 None 8 15 0 FALSE 0 0 NA A coding 1158 3474 311 3784 PB.9904.5 chr19 - 3404 20 full-splice_match GMIP ENST00000587238.5 2987 20 -53 -364 no_subtype FALSE canonical NA NA 104 None 8 2 0 FALSE 0 0 NA C coding 944 2832 86 2917 PB.5671.2 chr10 + 1783 7 novel_not_in_catalog TAF3 novel NA NA NA NA no_subtype TRUE canonical NA NA 613 None 2 3 0 TRUE 0 0 NA B coding 531 1593 191 1783 PB.9904.7 chr19 - 3415 22 novel_not_in_catalog GMIP novel NA NA NA NA no_subtype FALSE canonical NA NA 17 None 36 3 0 TRUE 0 0 NA C coding 944 2832 99 2930 PB.9904.6 chr19 - 3495 23 novel_not_in_catalog GMIP novel NA NA NA NA no_subtype FALSE canonical NA NA 17 None 77 4 0 TRUE 0 0 NA C coding 970 2910 99 3008 PB.9904.1 chr19 - 2882 22 novel_not_in_catalog GMIP novel NA NA NA NA no_subtype TRUE canonical NA NA 90 None 2 3 0 TRUE 0 0 NA C coding 878 2634 72 2705 PB.10059.2 chr19 + 3768 6 novel_not_in_catalog FOSB novel NA NA NA NA no_subtype TRUE canonical NA NA 1145 None 3 10 0 TRUE 0 0 NA C coding 338 1014 588 1601 PB.10059.1 chr19 + 4068 1 full-splice_match FOSB ENST00000586113.1 2182 1 -1890 4 no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA C coding 128 384 2655 3038 PB.575.3 chr1 + 5740 22 novel_in_catalog MOV10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3773 None 2 16 0 FALSE 0 0 NA C coding 947 2841 1022 3862 PB.575.2 chr1 + 3363 21 novel_not_in_catalog MOV10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3045 None 2 5 0 TRUE 0 0 NA C coding 1003 3009 126 3134 PB.575.1 chr1 + 3326 21 full-splice_match MOV10 ENST00000369645.5 3552 21 218 8 no_subtype FALSE canonical NA NA 3010 None 33 0 0 FALSE 0 0 NA C coding 1003 3009 91 3099 PB.7926.8 chr14 + 1315 1 incomplete-splice_match PPP2R5C ENST00000350249.7 3845 13 2317 214 no_subtype FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2930.1 chr4 + 5978 1 genic_intron novelGene_771 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 34 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2206.1 chr3 + 1610 9 full-splice_match GNAI2 ENST00000313601.10 2464 9 385 469 no_subtype FALSE canonical NA NA 1091 None 22 6 0 FALSE 0 0 NA C coding 338 1014 51 1064 PB.782.1 chr1 + 2375 4 full-splice_match PEA15 ENST00000360472.8 2471 4 88 8 no_subtype FALSE canonical NA NA 428 None 30 8 0 FALSE 0 0 NA A coding 130 390 101 490 PB.7429.2 chr13 + 3952 31 novel_in_catalog PDS5B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3645 None 2 0 0 FALSE 0 0 NA B coding 1310 3930 22 3951 PB.5527.1 chr9 - 2890 16 novel_not_in_catalog ENG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 278 None 151 5 0 FALSE 0 0 NA B coding 672 2016 212 2227 PB.8589.1 chr16 + 1588 9 novel_not_in_catalog ORC6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1410 None 3 7 2 TRUE 0 0 NA A coding 252 756 107 862 PB.1969.1 chr3 + 1541 9 incomplete-splice_match TRNT1 ENST00000434583.5 1871 10 -10 340 3prime_fragment FALSE canonical NA NA 1401 None 2 2 0 FALSE 0 0 NA A coding 405 1215 151 1365 PB.7229.6 chr12 - 2173 3 novel_not_in_catalog SELPLG novel NA NA NA NA no_subtype FALSE canonical NA NA 142 None 24 4 0 TRUE 0 0 NA B coding 412 1236 151 1386 PB.7229.4 chr12 - 3030 4 novel_not_in_catalog SELPLG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 150 None 3 9 1 TRUE 0 0 NA B coding 412 1236 159 1394 PB.7229.3 chr12 - 2989 4 novel_not_in_catalog SELPLG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 4 9 0 TRUE 0 0 NA B coding 412 1236 131 1366 PB.7229.2 chr12 - 2998 3 novel_not_in_catalog SELPLG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 2 12 1 TRUE 0 0 NA B coding 412 1236 128 1363 PB.7229.1 chr12 - 3016 4 novel_not_in_catalog SELPLG novel NA NA NA NA no_subtype FALSE canonical NA NA 152 None 2 14 1 TRUE 0 0 NA B coding 412 1236 161 1396 PB.1871.1 chr2 + 2471 14 novel_not_in_catalog ANKZF1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2151 None 3 6 1 FALSE 0 0 NA B coding 726 2178 95 2272 PB.194.1 chr1 - 1567 9 full-splice_match RPA2 ENST00000373912.7 1752 9 167 18 no_subtype FALSE canonical NA NA 143 None 42 2 0 FALSE 0 0 NA A coding 270 810 134 943 PB.2206.2 chr3 + 2823 2 genic XXcos-LUCA16.1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1212 None 2 20 1 FALSE 0 0 NA C coding 131 393 2304 2696 PB.6468.3 chr11 - 1789 4 full-splice_match RBM4B ENST00000310046.8 1840 4 44 7 no_subtype FALSE canonical NA NA 114 None 7 7 1 FALSE 0 0 NA C coding 359 1077 127 1203 PB.6468.1 chr11 - 2847 10 novel_not_in_catalog RBM4B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 107 None 2 18 1 TRUE 0 0 NA C coding 151 453 120 572 PB.4096.1 chr6 + 1490 12 full-splice_match NT5DC1 ENST00000319550.8 6923 12 -1 5434 no_subtype FALSE canonical NA NA 1335 None 41 3 0 FALSE 0 0 NA A coding 455 1365 84 1448 PB.5959.2 chr10 + 2536 1 novel_in_catalog R3HCC1L novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA C coding 107 321 308 628 PB.2206.5 chr3 + 1450 7 full-splice_match GNAI2 ENST00000490122.5 2445 7 988 7 no_subtype FALSE canonical NA NA 931 None 10 3 0 FALSE 0 0 NA C coding 274 822 83 904 PB.1871.3 chr2 + 2746 13 novel_in_catalog ANKZF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2413 None 2 4 0 FALSE 0 0 NA B coding 661 1983 552 2534 PB.2206.4 chr3 + 6202 1 novel_in_catalog GNAI2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 26 0 FALSE 0 0 NA C coding 141 423 3978 4400 PB.7235.1 chr12 - 3485 1 antisense novelGene_ACACB_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.561.2 chr1 - 2831 9 novel_not_in_catalog DRAM2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 211 None 3 14 2 TRUE 0 0 NA B coding 121 363 283 645 PB.561.3 chr1 - 1372 10 novel_not_in_catalog DRAM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 41 None 3 3 1 FALSE 0 0 NA B coding 266 798 316 1113 PB.561.5 chr1 - 1423 11 novel_not_in_catalog DRAM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 41 None 2 4 1 FALSE 0 0 NA B coding 266 798 374 1171 PB.561.6 chr1 - 1375 11 novel_not_in_catalog DRAM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 41 None 2 3 1 FALSE 0 0 NA B coding 266 798 329 1126 PB.2423.1 chr3 - 2402 14 full-splice_match KPNA1 ENST00000344337.10 6830 14 7 4421 no_subtype FALSE canonical NA NA 165 None 76 4 0 FALSE 0 0 NA C coding 538 1614 171 1784 PB.7066.2 chr12 + 1938 7 novel_not_in_catalog TSFM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1829 None 4 4 0 TRUE 0 0 NA C coding 325 975 13 987 PB.1445.1 chr2 + 2619 9 full-splice_match MAT2A ENST00000306434.7 2819 9 200 0 no_subtype FALSE canonical NA NA 1008 None 116 6 0 FALSE 0 0 NA C coding 332 996 113 1108 PB.2206.6 chr3 + 3417 7 novel_in_catalog GNAI2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2030 None 2 10 0 FALSE 0 0 NA C coding 303 909 1310 2218 PB.1975.1 chr3 - 2139 10 novel_not_in_catalog SUMF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 290 None 24 4 0 TRUE 0 0 NA B coding 374 1122 21 1142 PB.8809.1 chr16 - 2780 5 incomplete-splice_match ANKRD11 ENST00000378330.6 9132 14 6340 12 5prime_fragment FALSE canonical NA NA 1419 None 13 4 0 FALSE 0 0 NA B coding 498 1494 445 1938 PB.9121.2 chr17 - 3160 15 full-splice_match JUP ENST00000310706.9 3200 15 24 16 no_subtype FALSE canonical NA NA 87 None 121 2 0 FALSE 0 0 NA C coding 745 2235 96 2330 PB.6448.1 chr11 + 1257 10 full-splice_match CTSW ENST00000307886.7 1300 10 33 10 no_subtype TRUE canonical NA NA 1033 None 10 2 0 FALSE 0 0 NA A coding 376 1128 14 1141 PB.9121.6 chr17 - 3208 15 novel_not_in_catalog JUP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 110 None 4 15 1 TRUE 0 0 NA C coding 745 2235 119 2353 PB.6325.3 chr11 + 2602 1 incomplete-splice_match PTPRJ ENST00000613246.4 7851 25 5236 14 no_subtype FALSE canonical NA NA NA None 19 13 0 FALSE 0 0 NA B coding 105 315 1534 1848 PB.6016.2 chr10 - 2432 21 full-splice_match XPNPEP1 ENST00000502935.5 2539 21 98 9 no_subtype FALSE canonical NA NA 54 None 5 1 0 FALSE 0 0 NA C coding 666 1998 23 2020 PB.9121.5 chr17 - 3516 14 full-splice_match JUP ENST00000393931.7 3497 14 -31 12 no_subtype FALSE canonical NA NA 142 None 12 23 0 FALSE 0 0 NA C coding 745 2235 151 2385 PB.6919.6 chr12 - 5611 1 novel_in_catalog SLC38A1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 11 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10044.1 chr19 - 3057 6 novel_not_in_catalog ZNF180 novel NA NA NA NA no_subtype FALSE canonical NA NA 265 None 3 11 0 TRUE 0 0 NA A coding 665 1995 309 2303 PB.6919.4 chr12 - 5606 17 full-splice_match SLC38A1 ENST00000398637.9 8066 17 20 2440 no_subtype FALSE canonical NA NA 467 None 2 19 0 FALSE 0 0 NA C coding 487 1461 676 2136 PB.6919.5 chr12 - 3586 1 novel_in_catalog SLC38A1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA C coding 114 342 1915 2256 PB.1239.2 chr2 + 3695 17 novel_in_catalog NRBP1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 3149 None 3 8 0 FALSE 0 0 NA C coding 326 978 2274 3251 PB.6919.3 chr12 - 4269 8 incomplete-splice_match SLC38A1 ENST00000549049.5 3196 16 1227 -2300 5prime_fragment FALSE canonical NA NA 41 None 3 13 0 FALSE 0 0 NA C coding 259 777 21 797 PB.1239.1 chr2 + 2124 18 full-splice_match NRBP1 ENST00000379852.7 2163 18 37 2 no_subtype FALSE canonical NA NA 1578 None 29 1 0 FALSE 0 0 NA C coding 535 1605 76 1680 PB.4059.1 chr6 - 3403 22 novel_not_in_catalog SEC63 novel NA NA NA NA no_subtype FALSE canonical NA NA 309 None 26 8 0 TRUE 0 0 NA C coding 760 2280 186 2465 PB.109.2 chr1 - 1628 11 novel_not_in_catalog DDOST novel NA NA NA NA no_subtype FALSE canonical NA NA 207 None 184 8 1 FALSE 0 0 NA B coding 438 1314 54 1367 PB.4059.3 chr6 - 1760 16 incomplete-splice_match SEC63 ENST00000369002.8 6411 21 -12 4663 internal_fragment FALSE canonical NA NA 316 None 14 1 0 FALSE 0 0 NA C coding 522 1566 193 1758 PB.2146.1 chr3 - 1576 3 novel_not_in_catalog CCR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 126 None 3 3 0 TRUE 0 0 NA A coding 355 1065 138 1202 PB.4528.1 chr7 + 1634 1 novel_in_catalog TRRAP novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8561.1 chr16 - 2555 4 novel_not_in_catalog ZNF689 novel NA NA NA NA no_subtype FALSE canonical NA NA 376 None 7 13 0 TRUE 0 0 NA A coding 500 1500 172 1671 PB.1219.1 chr2 + 2834 2 novel_not_in_catalog EFR3B novel NA NA NA NA no_subtype FALSE canonical NA NA 218 None 2 22 1 TRUE 0 0 NA A coding 77 231 66 296 PB.6939.2 chr12 - 1924 2 full-splice_match CCNT1 ENST00000551989.1 726 2 -260 -938 no_subtype FALSE canonical NA NA 479 None 2 3 0 FALSE 0 0 NA C coding 441 1323 558 1880 PB.6939.3 chr12 - 1536 2 novel_in_catalog CCNT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 231 None 2 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6460.2 chr11 - 1976 9 novel_in_catalog BRMS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 130 None 2 6 0 FALSE 0 0 NA C coding 233 699 138 836 PB.6460.1 chr11 - 1352 10 full-splice_match BRMS1 ENST00000359957.7 1445 10 87 6 no_subtype FALSE canonical NA NA 67 None 24 8 1 FALSE 0 0 NA C coding 246 738 75 812 PB.6727.13 chr11 + 1650 10 full-splice_match ST3GAL4 ENST00000526727.5 1967 10 312 5 no_subtype FALSE canonical NA NA 977 None 8 0 0 FALSE 0 0 NA C coding 333 999 63 1061 PB.6231.2 chr11 - 1505 13 novel_not_in_catalog SAAL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 166 None 15 1 0 TRUE 0 0 NA A coding 473 1419 32 1450 PB.9302.3 chr17 - 3530 17 novel_not_in_catalog PECAM1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 138 None 93 5 1 TRUE 0 0 NA B coding 728 2184 264 2447 PB.9302.2 chr17 - 2863 17 novel_not_in_catalog PECAM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 197 None 16 2 0 FALSE 0 0 NA B coding 728 2184 326 2509 PB.9302.4 chr17 - 2758 17 novel_in_catalog PECAM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 92 None 11 8 1 FALSE 0 0 NA B coding 728 2184 221 2404 PB.9429.1 chr17 - 2563 12 novel_not_in_catalog TEPSIN novel NA NA NA NA no_subtype FALSE canonical NA NA 75 None 3 10 1 FALSE 0 0 NA A coding 214 642 28 669 PB.9302.6 chr17 - 3639 17 novel_not_in_catalog PECAM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 243 None 3 4 0 FALSE 0 0 NA B coding 728 2184 372 2555 PB.8420.1 chr16 - 3706 16 full-splice_match GLYR1 ENST00000321919.13 3772 16 57 9 no_subtype FALSE canonical NA NA 58 None 61 11 0 FALSE 0 0 NA C coding 553 1659 21 1679 PB.8420.3 chr16 - 3090 16 novel_in_catalog GLYR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 57 None 4 10 0 FALSE 0 0 NA C coding 472 1416 20 1435 PB.7939.1 chr14 + 2776 6 incomplete-splice_match TNFAIP2 ENST00000333007.5 4175 11 1397 2 internal_fragment TRUE canonical NA NA 557 None 2 8 0 FALSE 0 0 NA B coding 221 663 34 696 PB.8420.5 chr16 - 2583 11 novel_in_catalog GLYR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 55 None 2 7 0 FALSE 0 0 NA C coding 368 1104 18 1121 PB.10378.7 chr20 + 2610 1 incomplete-splice_match PPP1R16B ENST00000373331.2 6106 10 3488 9 no_subtype FALSE canonical NA NA NA None 5 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7959.227 chr14 - 1500 10 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 31 7 4 TRUE 0 0 NA B coding 196 588 781 1368 PB.10378.5 chr20 + 6184 11 novel_not_in_catalog PPP1R16B novel NA NA NA NA no_subtype FALSE canonical NA NA 1324 None 2 11 0 FALSE 0 0 NA C coding 381 1143 689 1831 PB.10378.4 chr20 + 2629 3 novel_in_catalog PPP1R16B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 424 None 2 12 0 FALSE 0 0 NA C coding 185 555 175 729 PB.10378.3 chr20 + 5904 10 novel_in_catalog PPP1R16B novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1040 None 2 13 0 FALSE 0 0 NA C coding 399 1197 351 1547 PB.10378.2 chr20 + 3302 1 novel_in_catalog PPP1R16B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 12 8 0 FALSE 0 0 NA C coding 153 459 452 910 PB.10378.1 chr20 + 6255 11 full-splice_match PPP1R16B ENST00000299824.5 6251 11 -8 4 no_subtype FALSE canonical NA NA 1391 None 15 10 0 FALSE 0 0 NA C coding 567 1701 198 1898 PB.6416.1 chr11 - 1588 1 full-splice_match MIR194-2HG ENST00000384915.3 110 1 89 -1567 no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A coding 154 462 14 475 PB.5823.1 chr10 + 2653 4 novel_not_in_catalog EIF4EBP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 974 None 26 10 1 TRUE 0 0 NA B coding 120 360 227 586 PB.6366.1 chr11 + 5807 20 full-splice_match DAGLA ENST00000257215.9 5757 20 -55 5 no_subtype TRUE canonical NA NA 2342 None 5 14 0 FALSE 0 0 NA C coding 1042 3126 172 3297 PB.6337.1 chr11 - 1866 9 full-splice_match LPXN ENST00000395074.6 1833 9 -40 7 no_subtype FALSE canonical NA NA 142 None 43 3 0 FALSE 0 0 NA A coding 386 1158 130 1287 PB.2816.3 chr4 - 3942 7 full-splice_match RBM47 ENST00000295971.11 4056 7 0 114 no_subtype FALSE canonical NA NA 469 None 5 10 0 FALSE 0 0 NA C coding 593 1779 709 2487 PB.745.1 chr1 - 1603 6 full-splice_match GLMP ENST00000362007.5 1604 6 -6 7 no_subtype FALSE canonical NA NA 153 None 72 3 0 FALSE 0 0 NA C coding 406 1218 34 1251 PB.546.1 chr1 + 1415 8 full-splice_match GSTM4 ENST00000369836.8 1412 8 -9 6 no_subtype FALSE canonical NA NA 885 None 2 2 0 FALSE 0 0 NA A coding 218 654 319 972 PB.433.5 chr1 - 2721 7 novel_in_catalog ZRANB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 90 None 2 14 0 FALSE 0 0 NA C coding 228 684 35 718 PB.10586.1 chr21 - 5784 1 novel_in_catalog U2AF1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 40 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.745.2 chr1 - 1705 5 novel_in_catalog GLMP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 145 None 8 5 0 FALSE 0 0 NA C coding 352 1056 26 1081 PB.9795.1 chr19 - 4330 25 novel_in_catalog TNPO2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 63 None 3 14 1 FALSE 0 0 NA A coding 887 2661 77 2737 PB.8093.1 chr15 - 3325 1 antisense novelGene_RP11-23N2.4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 37 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4520.1 chr7 - 2595 12 novel_not_in_catalog PDK4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 387 None 10 4 0 TRUE 0 0 NA A coding 411 1233 258 1490 PB.3982.1 chr6 + 6822 15 full-splice_match PHF3 ENST00000393387.5 6947 15 65 60 no_subtype FALSE canonical NA NA 3958 None 2 7 0 FALSE 0 0 NA C coding 1992 5976 103 6078 PB.1625.1 chr2 + 1839 1 genic_intron novelGene_1215 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A coding 114 342 1405 1746 PB.4632.1 chr7 - 1351 11 novel_not_in_catalog FAM3C novel NA NA NA NA no_subtype FALSE canonical NA NA 177 None 9 1 0 TRUE 0 0 NA A coding 227 681 219 899 PB.8920.1 chr17 - 2728 3 novel_not_in_catalog KRBA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 810 None 2 9 0 FALSE 0 0 NA A coding 458 1374 873 2246 PB.8436.2 chr16 + 3320 1 novel_in_catalog CLEC16A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5044.1 chr8 - 2689 5 novel_not_in_catalog ANKRD46 novel NA NA NA NA no_subtype FALSE canonical NA NA 94 None 9 10 1 FALSE 0 0 NA B coding 228 684 225 908 PB.8247.4 chr15 + 1619 6 novel_not_in_catalog ZFAND6 novel NA NA NA NA no_subtype FALSE canonical NA NA 727 None 16 3 1 FALSE 0 0 NA C coding 208 624 250 873 PB.8247.5 chr15 + 1782 7 novel_not_in_catalog ZFAND6 novel NA NA NA NA no_subtype FALSE canonical NA NA 884 None 9 2 0 FALSE 0 0 NA C coding 208 624 407 1030 PB.8247.2 chr15 + 1673 7 full-splice_match ZFAND6 ENST00000261749.10 1814 7 119 22 no_subtype FALSE canonical NA NA 781 None 10 1 0 FALSE 0 0 NA C coding 208 624 304 927 PB.8247.3 chr15 + 1639 9 novel_not_in_catalog ZFAND6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 742 None 2 7 2 TRUE 0 0 NA C coding 208 624 265 888 PB.9421.1 chr17 + 3466 20 novel_in_catalog GAA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2858 None 55 8 1 FALSE 0 0 NA A coding 952 2856 60 2915 PB.8247.1 chr15 + 1507 6 full-splice_match ZFAND6 ENST00000558494.5 1472 6 -24 -11 no_subtype FALSE canonical NA NA 615 None 56 3 0 FALSE 0 0 NA C coding 208 624 138 761 PB.395.2 chr1 - 3147 6 full-splice_match PLPP3 ENST00000371250.3 3292 6 120 25 no_subtype FALSE canonical NA NA 571 None 3 7 0 FALSE 0 0 NA C coding 311 933 433 1365 PB.395.1 chr1 - 1600 7 novel_not_in_catalog PLPP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 686 None 29 0 0 TRUE 0 0 NA C coding 311 933 548 1480 PB.950.2 chr1 + 3977 10 full-splice_match C1orf106 ENST00000413687.2 2197 10 225 -2005 no_subtype FALSE canonical NA NA 1780 None 28 13 0 FALSE 0 0 NA C coding 578 1734 137 1870 PB.5145.1 chr8 + 1925 7 novel_not_in_catalog PTP4A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1507 None 2 13 0 TRUE 0 0 NA B coding 173 519 961 1479 PB.11163.1 chrX - 3306 9 novel_in_catalog FAM122B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1016 None 3 17 1 FALSE 0 0 NA A coding 223 669 919 1587 PB.1544.2 chr2 - 6323 48 full-splice_match ANAPC1 ENST00000341068.7 8262 48 509 1430 no_subtype TRUE canonical NA NA 240 None 14 2 0 FALSE 0 0 NA A coding 1934 5802 295 6096 PB.8632.2 chr16 + 2397 16 novel_not_in_catalog RSPRY1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2249 None 2 3 0 TRUE 0 0 NA B coding 537 1611 733 2343 PB.8632.3 chr16 + 2053 16 novel_not_in_catalog RSPRY1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1906 None 2 1 0 TRUE 0 0 NA B coding 537 1611 390 2000 PB.10343.4 chr20 - 2965 18 novel_in_catalog TRPC4AP novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 193 None 4 8 0 FALSE 0 0 NA C coding 735 2205 26 2230 PB.4516.2 chr7 - 5836 5 novel_not_in_catalog BET1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 709 None 2 42 3 TRUE 0 0 NA C non_coding NA NA NA NA PB.4516.1 chr7 - 1334 4 full-splice_match BET1 ENST00000222547.7 1504 4 65 105 no_subtype FALSE canonical NA NA 113 None 17 5 0 FALSE 0 0 NA C coding 118 354 95 448 PB.2047.1 chr3 - 2804 2 genic_intron novelGene_191 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2223 None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7342.2 chr12 - 2848 14 novel_not_in_catalog ZCCHC8 novel NA NA NA NA no_subtype FALSE canonical NA NA 329 None 26 0 0 TRUE 0 0 NA B coding 707 2121 131 2251 PB.10834.1 chr22 - 2754 10 novel_not_in_catalog BRD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 29 None 2 7 0 TRUE 0 0 NA A coding 583 1749 63 1811 PB.7662.1 chr14 - 1529 13 full-splice_match PPP2R3C ENST00000261475.9 1839 13 294 16 no_subtype FALSE canonical NA NA 118 None 8 2 1 FALSE 0 0 NA A coding 453 1359 61 1419 PB.8818.1 chr16 - 1568 11 full-splice_match FANCA ENST00000389302.7 1641 11 56 17 no_subtype FALSE canonical NA NA 65 None 2 7 0 FALSE 0 0 NA A coding 182 546 332 877 PB.4898.4 chr8 + 5887 2 genic_intron novelGene_419 novel NA NA NA NA no_subtype FALSE canonical NA NA 4256 None 3 30 0 FALSE 0 0 NA A coding 225 675 451 1125 PB.4130.1 chr6 - 2330 5 full-splice_match CTGF ENST00000367976.3 2339 5 1 8 no_subtype FALSE canonical NA NA 266 None 3 4 0 FALSE 0 0 NA A coding 349 1047 201 1247 PB.878.3 chr1 + 2665 1 incomplete-splice_match RABGAP1L ENST00000392064.6 6282 8 3521 97 no_subtype FALSE canonical NA NA NA None 39 21 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.878.2 chr1 + 3108 1 novel_in_catalog RABGAP1L novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.878.1 chr1 + 6216 8 novel_not_in_catalog RABGAP1L novel NA NA NA NA no_subtype FALSE canonical NA NA 759 None 28 38 0 TRUE 0 0 NA C coding 245 735 175 909 PB.6583.3 chr11 - 1449 2 full-splice_match CTSC ENST00000534131.1 583 2 -32 -834 no_subtype FALSE canonical NA NA 268 None 2 19 0 FALSE 0 0 NA C coding 127 381 97 477 PB.7959.194 chr14 - 1598 11 fusion CH17-212P11.5,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 103 None 2 11 5 TRUE 0 0 NA B coding 196 588 877 1464 PB.6583.1 chr11 - 1856 7 full-splice_match CTSC ENST00000227266.9 1921 7 51 14 no_subtype FALSE canonical NA NA 236 None 144 1 0 FALSE 0 0 NA C coding 463 1389 65 1453 PB.5165.3 chr8 + 2917 8 novel_in_catalog GPAA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2580 None 2 21 0 FALSE 0 0 NA C coding 284 852 1008 1859 PB.9383.1 chr17 - 2055 16 full-splice_match SRP68 ENST00000307877.6 2649 16 128 466 no_subtype FALSE canonical NA NA 218 None 82 1 0 FALSE 0 0 NA C coding 627 1881 35 1915 PB.10228.9 chr20 - 6896 6 novel_not_in_catalog SIRPB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 108 None 6 39 1 TRUE 0 0 NA B coding 107 321 804 1124 PB.7682.1 chr14 - 1669 4 novel_not_in_catalog DNAAF2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 678 None 2 8 1 TRUE 0 0 NA B coding 328 984 343 1326 PB.682.2 chr1 - 3023 11 full-splice_match RORC ENST00000318247.6 2180 11 39 -882 no_subtype FALSE canonical NA NA 109 None 17 4 0 FALSE 0 0 NA C coding 518 1554 70 1623 PB.8928.1 chr17 + 3180 15 novel_not_in_catalog GLP2R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2519 None 4 9 0 TRUE 0 0 NA A coding 553 1659 137 1795 PB.9679.3 chr19 - 2979 16 novel_not_in_catalog EEF2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 86 None 3 4 1 TRUE 0 0 NA C coding 858 2574 84 2657 PB.6402.2 chr11 + 1620 14 novel_not_in_catalog STIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1551 None 2 1 1 TRUE 0 0 NA C coding 514 1542 54 1595 PB.6402.1 chr11 + 2080 14 full-splice_match STIP1 ENST00000305218.8 2196 14 111 5 no_subtype FALSE canonical NA NA 1595 None 19 3 0 FALSE 0 0 NA C coding 543 1629 37 1665 PB.406.1 chr1 + 1490 6 incomplete-splice_match USP1 ENST00000339950.4 3996 9 164 2342 3prime_fragment FALSE canonical NA NA 1208 None 2 4 1 FALSE 0 0 NA C coding 279 837 652 1488 PB.2295.1 chr3 + 844 3 full-splice_match ARL6IP5 ENST00000273258.3 2101 3 98 1159 no_subtype FALSE canonical NA NA 400 None 111 1 0 FALSE 0 0 NA C coding 188 564 7 570 PB.7959.34 chr14 - 1476 7 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 86 None 2 10 3 TRUE 0 0 NA B coding 462 1386 41 1426 PB.406.2 chr1 + 3555 9 full-splice_match USP1 ENST00000339950.4 3996 9 378 63 no_subtype FALSE canonical NA NA 2059 None 10 10 1 FALSE 0 0 NA C coding 785 2355 438 2792 PB.749.5 chr1 - 2703 4 novel_not_in_catalog ISG20L2 novel NA NA NA NA no_subtype FALSE canonical NA NA 75 None 4 12 0 FALSE 0 0 NA B coding 353 1059 193 1251 PB.10730.12 chr22 - 7072 41 full-splice_match MYH9 ENST00000216181.9 7501 41 61 368 no_subtype FALSE canonical NA NA 151 None 316 7 0 FALSE 0 0 NA C coding 1960 5880 171 6050 PB.2196.2 chr3 + 2545 1 incomplete-splice_match DAG1 ENST00000308775.6 5522 3 2972 6 no_subtype FALSE canonical NA NA NA None 3 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2949.3 chr4 + 2608 1 genic_intron novelGene_801 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 46 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.749.9 chr1 - 2687 4 novel_not_in_catalog ISG20L2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 39 None 2 14 1 TRUE 0 0 NA B coding 353 1059 180 1238 PB.454.1 chr1 - 1332 7 full-splice_match CTBS ENST00000370630.5 6600 7 19 5249 no_subtype FALSE canonical NA NA 207 None 31 4 0 FALSE 0 0 NA C coding 385 1155 31 1185 PB.5979.1 chr10 + 3054 12 novel_not_in_catalog SFXN3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1304 None 5 16 0 TRUE 0 0 NA B coding 321 963 436 1398 PB.6154.1 chr11 + 3034 19 full-splice_match RRM1 ENST00000300738.9 3076 19 34 8 no_subtype FALSE canonical NA NA 2360 None 127 4 0 FALSE 0 0 NA A coding 792 2376 171 2546 PB.8453.1 chr16 + 4242 31 full-splice_match NOMO1 ENST00000287667.11 4355 31 103 10 no_subtype TRUE canonical NA NA 3605 None 14 6 0 FALSE 0 0 NA A coding 1222 3666 69 3734 PB.3562.2 chr5 + 2561 16 incomplete-splice_match RP11-449H3.3 ENST00000506502.2 3311 20 31 719 3prime_fragment TRUE canonical NA NA 2546 None 2 0 0 FALSE 0 0 NA A coding 792 2376 186 2561 PB.10614.8 chr22 + 2515 6 novel_in_catalog IL17RA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 326 None 3 7 0 FALSE 0 0 NA C coding 561 1683 155 1837 PB.5048.4 chr8 - 2768 6 full-splice_match YWHAZ ENST00000395953.6 994 6 83 -1857 no_subtype FALSE canonical NA NA 56 None 42 9 0 FALSE 0 0 NA C coding 245 735 68 802 PB.3758.1 chr6 - 3428 1 incomplete-splice_match ATXN1 ENST00000436367.5 10587 8 7157 3 no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1507.2 chr2 - 3574 21 novel_not_in_catalog REV1 novel NA NA NA NA no_subtype FALSE canonical NA NA 172 None 2 7 0 FALSE 0 0 NA B coding 542 1626 1949 3574 PB.5979.3 chr10 + 2753 10 novel_not_in_catalog SFXN3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1003 None 4 7 0 TRUE 0 0 NA B coding 321 963 135 1097 PB.6227.1 chr11 - 4219 1 novel_in_catalog USH1C novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 21 0 FALSE 0 0 NA B coding 123 369 1050 1418 PB.9366.6 chr17 - 2785 2 full-splice_match GRB2 ENST00000577711.1 555 2 20 -2250 no_subtype FALSE canonical NA NA 173 None 2 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10614.2 chr22 + 5434 14 novel_not_in_catalog IL17RA novel NA NA NA NA no_subtype FALSE canonical NA NA 4560 None 22 33 1 TRUE 0 0 NA C coding 677 2031 498 2528 PB.10614.3 chr22 + 3142 13 full-splice_match IL17RA ENST00000319363.10 8607 13 102 5363 no_subtype FALSE canonical NA NA 1118 None 12 8 0 FALSE 0 0 NA C coding 866 2598 32 2629 PB.11160.1 chrX - 4014 10 novel_not_in_catalog GPC4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 680 None 2 16 1 TRUE 0 0 NA C coding 553 1659 521 2179 PB.9366.2 chr17 - 1280 6 full-splice_match GRB2 ENST00000316804.9 3248 6 26 1942 no_subtype FALSE canonical NA NA 139 None 237 2 0 FALSE 0 0 NA C coding 217 651 277 927 PB.9366.1 chr17 - 2928 1 novel_in_catalog GRB2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 16 0 FALSE 0 0 NA C coding 132 396 2066 2461 PB.11160.2 chrX - 2646 9 full-splice_match GPC4 ENST00000370828.3 4960 9 5 2309 no_subtype FALSE canonical NA NA 680 None 2 5 0 FALSE 0 0 NA C coding 556 1668 521 2188 PB.10318.1 chr20 - 5626 4 novel_not_in_catalog PLAGL2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 110 None 3 20 1 TRUE 0 0 NA B coding 496 1488 225 1712 PB.10035.1 chr19 - 2084 17 full-splice_match XRCC1 ENST00000262887.9 2802 17 443 275 no_subtype FALSE canonical NA NA 156 None 6 2 0 FALSE 0 0 NA A coding 633 1899 106 2004 PB.9403.5 chr17 - 2797 20 novel_not_in_catalog TMC6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 80 None 3 5 1 TRUE 0 0 NA B coding 805 2415 158 2572 PB.10318.2 chr20 - 5615 4 novel_not_in_catalog PLAGL2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 103 None 16 19 1 TRUE 0 0 NA B coding 496 1488 218 1705 PB.7803.1 chr14 - 2589 1 full-splice_match PNMA1 ENST00000316836.4 2590 1 -9 10 no_subtype FALSE canonical NA NA NA None 71 14 0 FALSE 0 0 NA A coding 351 1053 749 1801 PB.9403.2 chr17 - 2848 20 novel_not_in_catalog TMC6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 133 None 25 6 2 TRUE 0 0 NA B coding 805 2415 211 2625 PB.6569.3 chr11 + 5847 16 full-splice_match PCF11 ENST00000298281.8 7677 16 167 1663 no_subtype FALSE canonical NA NA 4737 None 3 11 0 FALSE 0 0 NA C coding 1555 4665 286 4950 PB.8973.1 chr17 + 3027 9 novel_in_catalog EPN2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1810 None 2 10 0 FALSE 0 0 NA C coding 546 1638 469 2106 PB.8973.2 chr17 + 3092 10 full-splice_match EPN2 ENST00000347697.6 4664 10 29 1543 no_subtype FALSE canonical NA NA 1875 None 2 16 0 FALSE 0 0 NA C coding 575 1725 447 2171 PB.11100.5 chrX - 1764 3 full-splice_match TSC22D3 ENST00000372390.8 1812 3 37 11 no_subtype FALSE canonical NA NA 194 None 3 3 0 FALSE 0 0 NA C coding 77 231 244 474 PB.9403.8 chr17 - 2918 19 novel_not_in_catalog TMC6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 51 None 2 11 1 FALSE 0 0 NA B coding 674 2022 122 2143 PB.6434.1 chr11 + 1614 1 full-splice_match NEAT1_3,NEAT1_2,NEAT1 ENST00000613347.1 159 1 -406 -1049 no_subtype FALSE canonical NA NA NA None 14 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6434.3 chr11 + 2125 2 full-splice_match NEAT1 ENST00000499732.2 1811 2 26 -340 no_subtype FALSE canonical NA NA 584 None 3 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7454.1 chr13 - 1559 11 novel_not_in_catalog MTRF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 3 2 0 TRUE 0 0 NA A coding 445 1335 112 1446 PB.1170.1 chr2 + 1460 6 full-splice_match ACP1 ENST00000272065.9 1549 6 80 9 no_subtype FALSE canonical NA NA 412 None 36 14 1 FALSE 0 0 NA C coding 158 474 14 487 PB.1170.2 chr2 + 1463 6 full-splice_match ACP1 ENST00000272067.10 1552 6 84 5 no_subtype FALSE canonical NA NA 411 None 7 12 0 FALSE 0 0 NA C coding 158 474 13 486 PB.2134.2 chr3 - 2700 8 full-splice_match ZDHHC3 ENST00000296127.7 3101 8 67 334 no_subtype FALSE canonical NA NA 183 None 11 8 0 FALSE 0 0 NA C coding 326 978 211 1188 PB.574.1 chr1 + 2975 4 novel_not_in_catalog CAPZA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2538 None 7 16 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.7518.1 chr13 - 3063 21 novel_not_in_catalog DIS3 novel NA NA NA NA no_subtype FALSE canonical NA NA 291 None 27 1 1 FALSE 0 0 NA B coding 621 1863 1079 2941 PB.10219.3 chr20 + 1598 1 novel_in_catalog FAM110A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 11 4 0 FALSE 0 0 NA C coding 295 885 130 1014 PB.10219.2 chr20 + 1713 2 full-splice_match FAM110A ENST00000381941.7 1809 2 92 4 no_subtype FALSE canonical NA NA 145 None 18 4 0 FALSE 0 0 NA C coding 295 885 243 1127 PB.1420.1 chr2 + 1915 12 novel_not_in_catalog STAMBP novel NA NA NA NA no_subtype TRUE canonical NA NA 1560 None 6 5 1 TRUE 0 0 NA A coding 424 1272 51 1322 PB.6509.1 chr11 - 2647 17 novel_not_in_catalog CLPB novel NA NA NA NA no_subtype FALSE canonical NA NA 456 None 8 4 1 TRUE 0 0 NA A coding 677 2031 54 2084 PB.3692.3 chr5 - 6014 5 novel_not_in_catalog HNRNPH1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2411 None 2 45 0 TRUE 0 0 NA C coding 193 579 2186 2764 PB.4152.1 chr6 - 2038 7 full-splice_match IFNGR1 ENST00000367739.8 2139 7 92 9 no_subtype FALSE canonical NA NA 115 None 45 8 0 FALSE 0 0 NA C coding 489 1467 31 1497 PB.2343.1 chr3 - 2806 9 novel_not_in_catalog SENP7 novel NA NA NA NA no_subtype FALSE canonical NA NA 99 None 2 23 1 TRUE 0 0 NA A coding 268 804 60 863 PB.3345.5 chr5 + 2559 1 genic_intron novelGene_741 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4714.2 chr7 - 1824 8 full-splice_match MKRN1 ENST00000255977.6 3151 8 83 1244 no_subtype FALSE canonical NA NA 327 None 157 1 0 FALSE 0 0 NA C coding 482 1446 143 1588 PB.6774.1 chr12 + 1257 11 full-splice_match NDUFA9 ENST00000266544.9 8363 11 18 7088 no_subtype FALSE canonical NA NA 965 None 20 1 0 FALSE 0 0 NA A coding 377 1131 3 1133 PB.3684.2 chr5 - 1817 13 novel_not_in_catalog CLK4 novel NA NA NA NA no_subtype FALSE canonical NA NA 115 None 2 4 0 TRUE 0 0 NA B coding 453 1359 116 1474 PB.1455.2 chr2 + 2745 24 novel_not_in_catalog PTCD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2081 None 2 6 0 TRUE 0 0 NA B coding 495 1485 14 1498 PB.9885.6 chr19 - 1922 9 novel_in_catalog FKBP8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 256 None 6 1 0 FALSE 0 0 NA C coding 413 1239 282 1520 PB.8255.2 chr15 - 5846 5 novel_not_in_catalog STARD5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 440 None 2 30 2 TRUE 0 0 NA C coding 173 519 4150 4668 PB.8255.1 chr15 - 1950 6 full-splice_match STARD5 ENST00000302824.6 4871 6 -18 2939 no_subtype FALSE canonical NA NA 143 None 2 4 0 FALSE 0 0 NA C coding 213 639 45 683 PB.9885.2 chr19 - 1689 9 full-splice_match FKBP8 ENST00000608443.5 1849 9 156 4 no_subtype FALSE canonical NA NA 19 None 281 1 0 FALSE 0 0 NA C coding 413 1239 45 1283 PB.3902.1 chr6 - 3771 5 full-splice_match KCNK5 ENST00000359534.3 3756 5 -23 8 no_subtype FALSE canonical NA NA 548 None 21 22 0 FALSE 0 0 NA A coding 499 1497 363 1859 PB.7518.2 chr13 - 2756 1 novel_in_catalog DIS3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 19 0 FALSE 0 0 NA B coding 111 333 64 396 PB.3270.3 chr5 + 3488 12 novel_not_in_catalog GPBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2502 None 14 14 1 FALSE 0 0 NA C coding 473 1419 1240 2658 PB.3270.2 chr5 + 2852 12 full-splice_match GPBP1 ENST00000506184.6 2857 12 3 2 no_subtype FALSE canonical NA NA 2365 None 100 3 0 FALSE 0 0 NA C coding 473 1419 1103 2521 PB.3270.5 chr5 + 3074 13 novel_not_in_catalog GPBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2589 None 2 8 0 FALSE 0 0 NA C coding 493 1479 1267 2745 PB.3270.4 chr5 + 3426 13 full-splice_match GPBP1 ENST00000424459.7 4683 13 159 1098 no_subtype FALSE canonical NA NA 2438 None 31 4 0 FALSE 0 0 NA C coding 493 1479 1116 2594 PB.5387.1 chr9 - 2703 1 incomplete-splice_match CDC14B ENST00000412285.6 5271 15 2562 7 no_subtype FALSE canonical NA NA NA None 7 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3270.6 chr5 + 2930 13 novel_not_in_catalog GPBP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2446 None 2 6 1 TRUE 0 0 NA C coding 473 1419 1184 2602 PB.4708.3 chr7 + 3004 1 novel_in_catalog TBXAS1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 8 0 FALSE 0 0 NA B coding 73 219 223 441 PB.1455.1 chr2 + 2651 25 novel_not_in_catalog PTCD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1982 None 98 14 3 TRUE 0 0 NA B coding 419 1257 5 1261 PB.1139.1 chr1 - 2652 2 antisense novelGene_MTR_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1945 None 2 22 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.11033.1 chrX - 3467 2 genic_intron novelGene_696 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 880 None 2 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5130.4 chr8 + 2615 1 novel_in_catalog PHF20L1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7959.197 chr14 - 1528 8 fusion IGHG1,IGHV3-7,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 83 None 2 16 4 TRUE 0 0 NA B coding 196 588 807 1394 PB.1102.1 chr1 + 3307 2 genic RP4-803J11.2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1463 None 13 32 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.1178.1 chr2 - 2662 5 full-splice_match CMPK2 ENST00000256722.9 2884 5 212 10 no_subtype FALSE canonical NA NA 463 None 60 8 0 FALSE 0 0 NA A coding 59 177 959 1135 PB.10225.2 chr20 + 2731 10 intergenic novelGene_14 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1627 None 2 20 5 FALSE 0 0 NA B non_coding NA NA NA NA PB.8667.1 chr16 - 2843 2 full-splice_match B3GNT9 ENST00000449549.3 2917 2 46 28 no_subtype FALSE canonical NA NA 304 None 6 12 0 FALSE 0 0 NA A coding 402 1206 491 1696 PB.6097.1 chr10 - 2963 18 novel_not_in_catalog TUBGCP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 51 None 113 4 0 FALSE 0 0 NA B coding 902 2706 127 2832 PB.9413.1 chr17 - 2178 6 full-splice_match LGALS3BP ENST00000262776.7 2405 6 206 21 no_subtype FALSE canonical NA NA 80 None 60 4 1 FALSE 0 0 NA C coding 585 1755 104 1858 PB.6097.5 chr10 - 5530 20 novel_not_in_catalog TUBGCP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1577 None 2 32 2 TRUE 0 0 NA B coding 902 2706 2701 5406 PB.6998.15 chr12 + 1586 14 novel_not_in_catalog PCBP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1370 None 7 3 0 FALSE 0 0 NA C coding 219 657 348 1004 PB.9413.6 chr17 - 3653 5 novel_in_catalog LGALS3BP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 90 None 3 9 1 FALSE 0 0 NA C coding 391 1173 2161 3333 PB.2159.2 chr3 + 6288 23 novel_in_catalog PTPN23 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5555 None 4 13 0 FALSE 0 0 NA C coding 1239 3717 2316 6032 PB.4706.2 chr7 - 4266 1 incomplete-splice_match HIPK2 ENST00000406875.7 15049 15 4943 5841 no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA B coding 137 411 1163 1573 PB.2159.3 chr3 + 5230 25 full-splice_match PTPN23 ENST00000265562.4 5244 25 10 4 no_subtype FALSE canonical NA NA 4498 None 3 7 0 FALSE 0 0 NA C coding 1636 4908 68 4975 PB.6376.1 chr11 - 1400 10 full-splice_match EEF1G ENST00000329251.4 1523 10 111 12 no_subtype FALSE canonical NA NA 32 None 549 0 0 FALSE 0 0 NA C coding 437 1311 21 1331 PB.6376.2 chr11 - 1442 11 novel_not_in_catalog EEF1G novel NA NA NA NA no_subtype FALSE canonical NA NA 63 None 7 0 0 TRUE 0 0 NA C coding 317 951 415 1365 PB.9074.1 chr17 - 3861 26 full-splice_match MYO19 ENST00000614623.4 4054 26 181 12 no_subtype FALSE canonical NA NA 47 None 3 9 0 FALSE 0 0 NA A coding 970 2910 343 3252 PB.7068.1 chr12 - 1561 1 incomplete-splice_match CTDSP2 ENST00000398073.6 4795 8 3217 18 no_subtype FALSE canonical NA NA NA None 15 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7104.1 chr12 + 2913 30 novel_not_in_catalog NUP107 novel NA NA NA NA no_subtype TRUE canonical NA NA 2742 None 62 0 0 TRUE 0 0 NA A coding 925 2775 73 2847 PB.3683.1 chr5 + 1767 8 full-splice_match HNRNPAB ENST00000358344.7 1796 8 26 3 no_subtype FALSE canonical NA NA 1159 None 2 2 0 FALSE 0 0 NA A coding 332 996 232 1227 PB.3284.1 chr5 + 2836 2 genic_intron novelGene_587 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2810 None 2 20 0 FALSE 0 0 NA A coding 122 366 2069 2434 PB.2159.1 chr3 + 5627 24 novel_in_catalog PTPN23 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4895 None 9 8 0 FALSE 0 0 NA C coding 1239 3717 1656 5372 PB.9227.3 chr17 - 1599 1 incomplete-splice_match PPP1R9B ENST00000612501.1 4167 10 2563 6 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C coding 102 306 801 1106 PB.3579.9 chr5 - 2977 1 novel_in_catalog CD74 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 13 0 FALSE 0 0 NA C coding 87 261 76 336 PB.9227.1 chr17 - 2808 10 full-splice_match PPP1R9B ENST00000612501.1 4167 10 1353 6 no_subtype FALSE canonical NA NA 135 None 7 9 0 FALSE 0 0 NA C coding 341 1023 193 1215 PB.3032.1 chr4 + 2818 15 incomplete-splice_match KIAA1109 ENST00000388738.7 15574 84 1465 11291 internal_fragment FALSE canonical NA NA 2413 None 2 0 0 FALSE 0 0 NA B coding 887 2661 156 2816 PB.6956.1 chr12 + 3097 25 novel_in_catalog PRPF40B novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 2534 None 2 21 4 FALSE 0 0 NA A coding 865 2595 30 2624 PB.2736.7 chr4 + 2720 2 antisense novelGene_RP11-367J11.2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 874 None 6 23 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2736.1 chr4 + 5595 14 novel_not_in_catalog TBC1D14 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3749 None 7 29 1 TRUE 0 0 NA B coding 551 1653 153 1805 PB.2736.3 chr4 + 4001 13 novel_not_in_catalog TBC1D14 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2156 None 2 30 1 TRUE 0 0 NA B coding 413 1239 104 1342 PB.2088.2 chr3 + 1522 2 novel_not_in_catalog PDCD6IP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1446 None 4 5 0 TRUE 0 0 NA C coding 121 363 133 495 PB.6615.1 chr11 - 3224 6 novel_not_in_catalog PDGFD novel NA NA NA NA no_subtype FALSE canonical NA NA 136 None 3 11 1 TRUE 0 0 NA B coding 215 645 92 736 PB.6615.3 chr11 - 3710 9 novel_not_in_catalog PDGFD novel NA NA NA NA no_subtype TRUE canonical NA NA 265 None 2 11 2 TRUE 0 0 NA B coding 364 1092 142 1233 PB.6615.2 chr11 - 4026 9 novel_not_in_catalog PDGFD novel NA NA NA NA no_subtype FALSE canonical NA NA 568 None 4 12 1 TRUE 0 0 NA B coding 370 1110 445 1554 PB.8088.1 chr15 + 4074 6 full-splice_match MAPK6 ENST00000261845.6 5345 6 41 1230 no_subtype FALSE canonical NA NA 1833 None 2 9 0 FALSE 0 0 NA C coding 721 2163 767 2929 PB.1065.3 chr1 + 1813 4 novel_in_catalog BROX novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 265 None 3 14 0 FALSE 0 0 NA C coding 102 306 58 363 PB.4828.8 chr8 + 1497 10 novel_not_in_catalog PDLIM2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 944 None 2 7 2 TRUE 0 0 NA C coding 325 975 145 1119 PB.8249.2 chr15 + 1835 14 novel_not_in_catalog FAH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1143 None 2 7 1 TRUE 0 0 NA B coding 349 1047 174 1220 PB.5837.1 chr10 - 3009 9 full-splice_match DNAJB12 ENST00000394903.6 3198 9 181 8 no_subtype FALSE canonical NA NA 204 None 23 6 0 FALSE 0 0 NA C coding 375 1125 72 1196 PB.9411.3 chr17 - 5881 21 novel_in_catalog USP36 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 76 None 3 13 0 FALSE 0 0 NA C coding 1123 3369 250 3618 PB.8249.5 chr15 + 1357 16 novel_not_in_catalog FAH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1120 None 5 3 3 TRUE 0 0 NA B coding 349 1047 151 1197 PB.8249.6 chr15 + 1824 16 novel_not_in_catalog FAH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1140 None 2 7 3 TRUE 0 0 NA B coding 405 1215 3 1217 PB.1941.1 chr2 + 1768 8 full-splice_match LRRFIP1 ENST00000289175.10 3709 8 81 1860 no_subtype FALSE canonical NA NA 951 None 17 0 0 FALSE 0 0 NA C coding 512 1536 231 1766 PB.4828.1 chr8 + 1521 10 novel_in_catalog PDLIM2 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 963 None 45 1 1 FALSE 0 0 NA C coding 352 1056 83 1138 PB.4757.4 chr7 + 3032 16 novel_not_in_catalog NUB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1636 None 2 11 1 TRUE 0 0 NA B coding 571 1713 100 1812 PB.4828.3 chr8 + 1834 10 full-splice_match PDLIM2 ENST00000397760.8 1847 10 0 13 no_subtype FALSE canonical NA NA 1281 None 29 0 0 FALSE 0 0 NA C coding 352 1056 401 1456 PB.4828.2 chr8 + 1530 10 full-splice_match PDLIM2 ENST00000397761.6 1491 10 -19 -20 no_subtype FALSE canonical NA NA 977 None 55 0 0 FALSE 0 0 NA C coding 352 1056 97 1152 PB.4828.5 chr8 + 1596 10 novel_not_in_catalog PDLIM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1043 None 4 0 0 FALSE 0 0 NA C coding 352 1056 163 1218 PB.4828.4 chr8 + 3975 4 novel_not_in_catalog PDLIM2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2597 None 2 27 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.4828.7 chr8 + 1530 9 full-splice_match PDLIM2 ENST00000409417.5 1487 9 -20 -23 no_subtype FALSE canonical NA NA 977 None 12 2 0 FALSE 0 0 NA C coding 352 1056 97 1152 PB.4828.6 chr8 + 1474 9 novel_not_in_catalog PDLIM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 916 None 4 1 0 FALSE 0 0 NA C coding 332 996 96 1091 PB.8740.5 chr16 - 1431 8 novel_not_in_catalog GLG1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 212 None 2 10 3 TRUE 0 0 NA C coding 115 345 1085 1429 PB.555.1 chr1 - 2820 1 full-splice_match KCNA3 ENST00000369769.3 2569 1 522 -773 no_subtype FALSE canonical NA NA NA None 10 4 0 FALSE 0 0 NA A coding 439 1317 111 1427 PB.755.4 chr1 - 3276 27 novel_in_catalog ARHGEF11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 98 None 9 2 0 FALSE 0 0 NA B coding 959 2877 399 3275 PB.4587.1 chr7 - 2776 8 novel_in_catalog SRPK2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 28 None 2 11 1 FALSE 0 0 NA B coding 116 348 965 1312 PB.4587.3 chr7 - 884 9 incomplete-splice_match SRPK2 ENST00000393651.7 3650 16 17 2749 internal_fragment FALSE canonical NA NA 87 None 2 2 0 FALSE 0 0 NA B coding 271 813 72 884 PB.4587.2 chr7 - 2774 8 novel_in_catalog SRPK2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 28 None 2 3 0 FALSE 0 0 NA B coding 116 348 965 1312 PB.4496.1 chr7 + 3454 3 full-splice_match CLDN12 ENST00000287916.8 3565 3 106 5 no_subtype FALSE canonical NA NA 148 None 10 9 0 FALSE 0 0 NA A coding 244 732 182 913 PB.5411.1 chr9 - 1636 9 full-splice_match ALDOB ENST00000374855.8 2451 9 14 801 no_subtype FALSE canonical NA NA 101 None 51 1 0 FALSE 0 0 NA A coding 364 1092 112 1203 PB.3883.1 chr6 + 5580 4 antisense novelGene_STK38_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5551 None 2 50 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.837.1 chr1 - 2763 7 full-splice_match GPA33 ENST00000367868.3 2802 7 21 18 no_subtype FALSE canonical NA NA 366 None 58 12 0 FALSE 0 0 NA C coding 315 945 336 1280 PB.6174.1 chr11 - 1761 8 full-splice_match ARFIP2 ENST00000396777.7 1868 8 98 9 no_subtype FALSE canonical NA NA 108 None 10 0 0 FALSE 0 0 NA C coding 341 1023 151 1173 PB.8775.1 chr16 - 3405 6 full-splice_match HSDL1 ENST00000219439.8 3519 6 16 98 no_subtype FALSE canonical NA NA 93 None 9 11 0 FALSE 0 0 NA A coding 330 990 162 1151 PB.6174.2 chr11 - 1747 8 novel_not_in_catalog ARFIP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 95 None 2 4 1 TRUE 0 0 NA C coding 341 1023 135 1157 PB.10580.4 chr21 + 3027 21 novel_not_in_catalog SLC37A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1942 None 24 7 0 TRUE 0 0 NA B coding 533 1599 357 1955 PB.10580.5 chr21 + 3111 21 novel_not_in_catalog SLC37A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2039 None 2 10 0 TRUE 0 0 NA B coding 560 1680 373 2052 PB.10580.6 chr21 + 2850 20 novel_not_in_catalog SLC37A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1766 None 2 12 0 TRUE 0 0 NA B coding 533 1599 181 1779 PB.905.3 chr1 + 2834 13 novel_not_in_catalog NPL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2712 None 6 10 0 TRUE 0 0 NA B coding 320 960 140 1099 PB.10580.1 chr21 + 2916 21 novel_not_in_catalog SLC37A1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1843 None 16 8 0 TRUE 0 0 NA B coding 533 1599 258 1856 PB.10580.2 chr21 + 2977 21 novel_not_in_catalog SLC37A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1906 None 2 12 2 TRUE 0 0 NA B coding 560 1680 240 1919 PB.3218.2 chr5 - 2980 15 full-splice_match DAB2 ENST00000320816.10 4534 15 190 1364 no_subtype FALSE canonical NA NA 177 None 59 1 0 FALSE 0 0 NA C coding 770 2310 279 2588 PB.5399.1 chr9 + 3133 1 genic_intron novelGene_895 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A coding 100 300 1974 2273 PB.11108.1 chrX - 3111 6 full-splice_match AMMECR1 ENST00000262844.9 5504 6 154 2239 no_subtype FALSE canonical NA NA 487 None 11 14 0 FALSE 0 0 NA A coding 333 999 15 1013 PB.5656.2 chr10 + 3062 10 full-splice_match NET1 ENST00000380359.3 3253 10 12 179 no_subtype FALSE canonical NA NA 1365 None 189 12 0 FALSE 0 0 NA C coding 542 1626 144 1769 PB.1845.8 chr2 - 3885 23 incomplete-splice_match FN1 ENST00000421182.5 8103 45 3791 427 5prime_fragment FALSE canonical NA NA 78 None 2 16 0 FALSE 0 0 NA C coding 958 2874 321 3194 PB.6959.1 chr12 + 2523 10 full-splice_match TMBIM6 ENST00000267115.9 2836 10 2 311 no_subtype FALSE canonical NA NA 773 None 1994 10 0 FALSE 0 0 NA C coding 237 711 84 794 PB.10207.1 chr19 + 2116 3 novel_in_catalog ZNF584 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 617 None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.837.2 chr1 - 1544 1 incomplete-splice_match GPA33 ENST00000527955.5 2549 7 1003 3 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3383.2 chr5 - 2851 22 novel_in_catalog TTC37 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 42 None 6 6 1 FALSE 0 0 NA C coding 816 2448 270 2717 PB.934.1 chr1 + 1493 7 full-splice_match RGS13 ENST00000391995.6 1505 7 2 10 no_subtype FALSE canonical NA NA 580 None 6 5 0 FALSE 0 0 NA A coding 159 477 287 763 PB.8083.1 chr15 + 6702 22 novel_not_in_catalog AP4E1 novel NA NA NA NA no_subtype FALSE canonical NA NA 4644 None 3 27 1 TRUE 0 0 NA B coding 1137 3411 76 3486 PB.2398.1 chr3 - 2236 8 full-splice_match B4GALT4 ENST00000393765.6 2459 8 221 2 no_subtype FALSE canonical NA NA 33 None 7 3 0 FALSE 0 0 NA A coding 344 1032 397 1428 PB.7179.1 chr12 + 3621 4 full-splice_match TMPO ENST00000266732.8 3615 4 -15 9 no_subtype FALSE canonical NA NA 818 None 5 10 0 FALSE 0 0 NA C coding 694 2082 254 2335 PB.6959.4 chr12 + 2934 14 novel_not_in_catalog TMBIM6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2449 None 2 29 5 TRUE 0 0 NA C coding 237 711 227 937 PB.1729.1 chr2 - 1809 2 full-splice_match NEUROD1 ENST00000295108.3 2852 2 361 682 no_subtype FALSE canonical NA NA 86 None 3 1 0 FALSE 0 0 NA A coding 356 1068 98 1165 PB.1812.1 chr2 + 3357 6 novel_not_in_catalog ICOS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3023 None 2 12 0 TRUE 0 0 NA C coding 199 597 85 681 PB.2405.3 chr3 + 3390 16 novel_not_in_catalog NR1I2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3241 None 11 19 4 TRUE 0 0 NA C coding 379 1137 379 1515 PB.6959.5 chr12 + 2743 9 novel_in_catalog TMBIM6 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 689 None 3 15 1 FALSE 0 0 NA C coding 200 600 111 710 PB.1071.1 chr1 + 5430 5 full-splice_match FBXO28 ENST00000366862.9 5451 5 19 2 no_subtype FALSE canonical NA NA 736 None 21 33 2 FALSE 0 0 NA A coding 368 1104 25 1128 PB.9411.6 chr17 - 3080 17 full-splice_match USP36 ENST00000588086.5 3187 17 78 29 no_subtype FALSE canonical NA NA 51 None 25 1 0 FALSE 0 0 NA C coding 952 2856 225 3080 PB.806.1 chr1 + 609 5 full-splice_match FCER1G ENST00000289902.1 591 5 -18 0 no_subtype FALSE canonical NA NA 241 None 5 0 0 FALSE 0 0 NA A coding 86 258 44 301 PB.4757.7 chr7 + 1359 13 novel_not_in_catalog NUB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1337 None 2 0 0 TRUE 0 0 NA B coding 423 1269 90 1358 PB.668.1 chr1 - 2529 10 novel_in_catalog FAM63A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 583 None 5 8 0 FALSE 0 0 NA A coding 469 1407 673 2079 PB.837.3 chr1 - 3197 7 novel_not_in_catalog GPA33 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 185 None 2 63 3 TRUE 0 0 NA C coding 126 378 1323 1700 PB.10131.1 chr19 + 1402 6 full-splice_match SPIB ENST00000595883.5 3791 6 1 2388 no_subtype FALSE canonical NA NA 514 None 12 2 0 FALSE 0 0 NA A coding 262 786 25 810 PB.6515.4 chr11 - 2836 2 genic_intron novelGene_684 novel NA NA NA NA no_subtype FALSE canonical NA NA 1052 None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6515.2 chr11 - 4133 21 novel_not_in_catalog FCHSD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 210 None 2 14 0 TRUE 0 0 NA C coding 740 2220 190 2409 PB.9435.2 chr17 + 2954 21 novel_in_catalog HGS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2349 None 4 6 0 FALSE 0 0 NA C coding 350 1050 1408 2457 PB.4251.1 chr6 + 1531 12 full-splice_match FGFR1OP ENST00000349556.4 1484 12 -53 6 no_subtype FALSE canonical NA NA 1123 None 2 2 0 FALSE 0 0 NA A coding 379 1137 59 1195 PB.6515.1 chr11 - 4457 20 full-splice_match FCHSD2 ENST00000409418.8 3154 20 190 -1493 no_subtype FALSE canonical NA NA 215 None 3 16 0 FALSE 0 0 NA C coding 740 2220 195 2414 PB.5315.1 chr9 + 2698 1 genic_intron novelGene_651 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9435.3 chr17 + 2964 21 novel_in_catalog HGS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2356 None 2 9 0 FALSE 0 0 NA C coding 801 2403 62 2464 PB.3476.1 chr5 - 2177 4 novel_not_in_catalog C5orf15 novel NA NA NA NA no_subtype FALSE canonical NA NA 182 None 18 5 0 TRUE 0 0 NA A coding 257 771 71 841 PB.10689.1 chr22 - 1987 10 full-splice_match NIPSNAP1 ENST00000216121.11 2237 10 244 6 no_subtype FALSE canonical NA NA 109 None 2 6 0 FALSE 0 0 NA A coding 284 852 12 863 PB.4604.1 chr7 - 5650 34 full-splice_match LAMB1 ENST00000222399.10 5725 34 88 -13 no_subtype FALSE canonical NA NA 57 None 8 3 0 FALSE 0 0 NA A coding 1786 5358 144 5501 PB.9899.2 chr19 + 3813 19 novel_not_in_catalog MAU2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1767 None 15 7 1 TRUE 0 0 NA A coding 607 1821 19 1839 PB.6033.2 chr10 - 1331 3 antisense novelGene_CASP7_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 24 None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6033.1 chr10 + 2334 7 full-splice_match CASP7 ENST00000369318.7 2377 7 35 8 no_subtype FALSE canonical NA NA 749 None 9 6 0 FALSE 0 0 NA C coding 303 909 68 976 PB.7008.2 chr12 + 2724 7 novel_in_catalog HNRNPA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2031 None 4 16 0 FALSE 0 0 NA C coding 184 552 1473 2024 PB.7008.3 chr12 + 1231 11 full-splice_match HNRNPA1 ENST00000547566.5 1234 11 0 3 no_subtype FALSE canonical NA NA 1098 None 8 3 0 FALSE 0 0 NA C coding 320 960 61 1020 PB.7008.1 chr12 + 1716 10 full-splice_match HNRNPA1 ENST00000546500.5 4121 10 559 1846 no_subtype FALSE canonical NA NA 1023 None 366 4 0 FALSE 0 0 NA C coding 320 960 57 1016 PB.6852.1 chr12 + 1529 9 full-splice_match DERA ENST00000428559.6 1705 9 174 2 no_subtype FALSE canonical NA NA 938 None 26 2 0 FALSE 0 0 NA C coding 318 954 39 992 PB.6852.2 chr12 + 2886 7 novel_in_catalog DERA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 674 None 2 13 1 FALSE 0 0 NA C coding 282 846 38 883 PB.2422.1 chr3 - 3089 14 full-splice_match KPNA1 ENST00000344337.10 6830 14 8 3733 no_subtype FALSE canonical NA NA 164 None 2 8 0 FALSE 0 0 NA C coding 538 1614 170 1783 PB.667.2 chr1 - 2098 11 novel_not_in_catalog CERS2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 87 None 5 8 1 FALSE 0 0 NA C coding 380 1140 89 1228 PB.3550.1 chr5 + 2203 13 full-splice_match KIAA0141 ENST00000194118.8 2203 13 21 -21 no_subtype FALSE canonical NA NA 1615 None 2 7 1 FALSE 0 0 NA A coding 515 1545 67 1611 PB.10217.3 chr20 - 2761 15 novel_not_in_catalog CSNK2A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 99 None 14 9 0 TRUE 0 0 NA B coding 391 1173 326 1498 PB.10217.2 chr20 - 2664 14 novel_not_in_catalog CSNK2A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 119 None 21 7 0 TRUE 0 0 NA B coding 391 1173 229 1401 PB.10217.1 chr20 - 2666 1 incomplete-splice_match CSNK2A1 ENST00000349736.9 4299 13 1612 22 no_subtype FALSE canonical NA NA NA None 5 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8805.1 chr16 - 6108 38 novel_in_catalog PIEZO1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 25 None 2 13 1 FALSE 0 0 NA A coding 1911 5733 115 5847 PB.10217.7 chr20 - 2780 11 novel_not_in_catalog CSNK2A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 110 None 2 13 0 TRUE 0 0 NA B coding 256 768 337 1104 PB.5385.3 chr9 - 3965 17 novel_not_in_catalog FANCC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 170 None 2 21 1 TRUE 0 0 NA B coding 558 1674 338 2011 PB.10217.5 chr20 - 2662 13 novel_in_catalog CSNK2A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 119 None 2 8 0 FALSE 0 0 NA B coding 391 1173 229 1401 PB.5385.1 chr9 - 3878 16 novel_not_in_catalog FANCC novel NA NA NA NA no_subtype TRUE non_canonical NA NA 170 None 2 20 2 TRUE 0 0 NA B coding 558 1674 249 1922 PB.7329.2 chr12 + 2034 7 full-splice_match RNF34 ENST00000392465.7 2051 7 10 7 no_subtype FALSE canonical NA NA 1078 None 6 10 0 FALSE 0 0 NA C coding 373 1119 148 1266 PB.3918.1 chr6 + 2987 12 novel_not_in_catalog TAF8 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2598 None 2 31 2 TRUE 0 0 NA A coding 310 930 19 948 PB.7329.1 chr12 + 1953 6 full-splice_match RNF34 ENST00000361234.9 2066 6 103 10 no_subtype FALSE canonical NA NA 997 None 23 8 0 FALSE 0 0 NA C coding 372 1116 70 1185 PB.5849.1 chr10 + 1601 4 novel_not_in_catalog FUT11 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1584 None 6 2 0 TRUE 0 0 NA A coding 476 1428 9 1436 PB.9168.8 chr17 - 1403 10 novel_in_catalog SLC25A39 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical NA NA 116 None 4 0 0 FALSE 0 0 NA C coding 227 681 349 1029 PB.4643.8 chr7 + 3595 1 genic_intron novelGene_1101 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A coding 101 303 1036 1338 PB.9168.3 chr17 - 1900 12 novel_not_in_catalog SLC25A39 novel NA NA NA NA no_subtype FALSE canonical NA NA 456 None 3 2 0 FALSE 0 0 NA C coding 351 1053 472 1524 PB.6243.1 chr11 - 1434 7 novel_not_in_catalog CCDC34 novel NA NA NA NA no_subtype TRUE canonical NA NA 288 None 2 2 1 TRUE 0 0 NA A coding 261 783 342 1124 PB.9168.1 chr17 - 1511 11 novel_in_catalog SLC25A39 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 87 None 2 2 0 FALSE 0 0 NA C coding 344 1032 103 1134 PB.5901.3 chr10 + 1559 3 genic_intron novelGene_813 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1375 None 2 11 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10558.2 chr21 + 3134 12 incomplete-splice_match TTC3 ENST00000476784.5 7425 36 4276 15 internal_fragment FALSE canonical NA NA 1476 None 2 16 1 FALSE 0 0 NA B coding 440 1320 289 1608 PB.10558.1 chr21 + 3152 13 novel_not_in_catalog TTC3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1496 None 2 15 0 TRUE 0 0 NA B coding 438 1314 315 1628 PB.9168.4 chr17 - 1555 12 full-splice_match SLC25A39 ENST00000225308.12 1607 12 47 5 no_subtype FALSE canonical NA NA 113 None 110 0 0 FALSE 0 0 NA C coding 351 1053 129 1181 PB.7701.4 chr14 - 1463 2 genic RP11-463J10.3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 27 None 5 8 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.4263.1 chr7 - 1145 5 novel_not_in_catalog C7orf50 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 112 None 5 0 0 TRUE 0 0 NA A coding 65 195 371 565 PB.3645.2 chr5 + 3505 2 genic_intron novelGene_1318 novel NA NA NA NA no_subtype FALSE canonical NA NA 3380 None 2 22 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8695.1 chr16 - 1593 5 full-splice_match SLC7A6OS ENST00000263997.10 4189 5 12 2584 no_subtype FALSE canonical NA NA 199 None 9 3 0 FALSE 0 0 NA A coding 309 927 8 934 PB.7701.2 chr14 + 3338 2 incomplete-splice_match GNG2 ENST00000556752.2 3424 3 78 8 internal_fragment FALSE canonical NA NA 104 None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9641.11 chr19 + 2570 1 novel_in_catalog CIRBP novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA C coding 256 768 1079 1846 PB.116.1 chr1 + 2964 2 antisense novelGene_USP48_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2934 None 2 19 0 FALSE 0 0 NA A coding 113 339 508 846 PB.7592.3 chr14 - 5694 42 novel_not_in_catalog TEP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 45 None 2 5 2 TRUE 0 0 NA B coding 1750 5250 76 5325 PB.2451.3 chr3 - 3951 3 full-splice_match MGLL ENST00000476682.1 3999 3 41 7 no_subtype FALSE canonical NA NA 3530 None 24 24 0 FALSE 0 0 NA C coding 120 360 624 983 PB.2451.2 chr3 - 3073 1 incomplete-splice_match MGLL ENST00000398104.5 4235 8 1153 10 no_subtype FALSE canonical NA NA NA None 27 19 0 FALSE 0 0 NA C coding 169 507 1047 1553 PB.4643.9 chr7 + 3271 1 full-splice_match SND1-IT1 ENST00000623342.1 2481 1 -1485 695 no_subtype FALSE canonical NA NA NA None 7 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9672.1 chr19 + 1562 10 full-splice_match HMG20B ENST00000333651.10 1596 10 26 8 no_subtype FALSE canonical NA NA 990 None 54 3 0 FALSE 0 0 NA A coding 317 951 50 1000 PB.1210.1 chr2 - 3158 1 genic_intron novelGene_201 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3157.1 chr5 - 1179 3 full-splice_match CCDC127 ENST00000296824.3 9342 3 73 8090 no_subtype FALSE canonical NA NA 50 None 2 5 0 FALSE 0 0 NA A coding 260 780 61 840 PB.7315.2 chr12 + 3324 1 novel_in_catalog MLEC novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA B coding 139 417 118 534 PB.7315.1 chr12 + 6294 7 novel_not_in_catalog MLEC novel NA NA NA NA no_subtype FALSE canonical NA NA 3732 None 8 24 1 TRUE 0 0 NA B coding 292 876 146 1021 PB.8767.1 chr16 + 4268 34 novel_not_in_catalog PLCG2 novel NA NA NA NA no_subtype TRUE canonical NA NA 3933 None 38 4 0 TRUE 0 0 NA B coding 1265 3795 179 3973 PB.1057.1 chr1 + 3438 23 full-splice_match IARS2 ENST00000366922.2 3560 23 115 7 no_subtype FALSE canonical NA NA 2896 None 31 4 0 FALSE 0 0 NA A coding 1012 3036 1 3036 PB.4714.8 chr7 - 1575 5 full-splice_match MKRN1 ENST00000443720.6 1601 5 18 8 no_subtype FALSE canonical NA NA 322 None 2 3 0 FALSE 0 0 NA C coding 329 987 138 1124 PB.5366.3 chr9 - 3081 12 novel_not_in_catalog NOL8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 160 None 32 6 1 FALSE 0 0 NA B coding 964 2892 189 3080 PB.3238.1 chr5 - 3742 1 genic_intron novelGene_432 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5366.1 chr9 - 4024 17 novel_not_in_catalog NOL8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 162 None 6 8 1 FALSE 0 0 NA B coding 1165 3495 191 3685 PB.7959.192 chr14 - 1489 8 fusion IGHV4-4,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 20 4 TRUE 0 0 NA B coding 448 1344 11 1354 PB.5366.4 chr9 - 2947 12 novel_not_in_catalog NOL8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 36 None 4 4 1 FALSE 0 0 NA B coding 961 2883 65 2947 PB.7810.1 chr14 - 2062 12 novel_not_in_catalog ALDH6A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 76 None 20 3 1 FALSE 0 0 NA A coding 457 1371 263 1633 PB.8747.1 chr16 - 3228 7 full-splice_match BCAR1 ENST00000162330.9 3221 7 -21 14 no_subtype TRUE canonical NA NA 160 None 23 2 0 FALSE 0 0 NA A coding 870 2610 149 2758 PB.4273.1 chr7 + 2595 1 incomplete-splice_match TTYH3 ENST00000403167.5 4263 10 1657 12 no_subtype FALSE canonical NA NA NA None 6 17 0 FALSE 0 0 NA A coding 199 597 816 1412 PB.5465.1 chr9 + 1000 3 full-splice_match ATP6V1G1 ENST00000374050.3 1080 3 78 2 no_subtype FALSE canonical NA NA 198 None 17 6 0 FALSE 0 0 NA A coding 118 354 16 369 PB.946.6 chr1 + 2481 25 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2359 None 12 5 1 TRUE 0 0 NA B coding 760 2280 200 2479 PB.8208.2 chr15 + 1802 8 full-splice_match MPI ENST00000352410.8 5828 8 30 3996 no_subtype FALSE canonical NA NA 1090 None 7 6 0 FALSE 0 0 NA A coding 423 1269 38 1306 PB.8340.3 chr16 - 1455 10 full-splice_match LUC7L ENST00000293872.12 1456 10 -22 23 no_subtype FALSE canonical NA NA 194 None 3 1 0 FALSE 0 0 NA C coding 371 1113 134 1246 PB.6441.2 chr11 + 1979 14 full-splice_match KAT5 ENST00000377046.7 2237 14 255 3 no_subtype TRUE canonical NA NA 1424 None 2 7 0 FALSE 0 0 NA C coding 513 1539 18 1556 PB.9380.1 chr17 + 1854 1 antisense novelGene_ACOX1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A coding 152 456 47 502 PB.10076.1 chr19 - 2715 5 antisense novelGene_CTD-2233K9.1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 210 None 2 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5633.1 chr9 - 1473 9 full-splice_match NPDC1 ENST00000371601.4 1494 9 26 -5 no_subtype FALSE canonical NA NA 300 None 3 2 0 FALSE 0 0 NA A coding 325 975 189 1163 PB.5633.2 chr9 - 2045 10 novel_not_in_catalog ENTPD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 181 None 2 10 0 TRUE 0 0 NA A coding 495 1485 65 1549 PB.8982.1 chr17 + 3984 1 genic_intron novelGene_194 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4363.1 chr7 + 2776 2 genic_intron novelGene_327 novel NA NA NA NA no_subtype TRUE canonical NA NA 2333 None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9721.7 chr19 + 3368 25 novel_in_catalog PNPLA6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3103 None 2 2 0 FALSE 0 0 NA C coding 1055 3165 11 3175 PB.9721.1 chr19 + 4421 35 novel_in_catalog PNPLA6 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 4151 None 4 1 0 FALSE 0 0 NA C coding 1326 3978 246 4223 PB.9721.2 chr19 + 4280 33 novel_in_catalog PNPLA6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4009 None 6 2 0 FALSE 0 0 NA C coding 1326 3978 104 4081 PB.9721.3 chr19 + 4200 32 full-splice_match PNPLA6 ENST00000600737.5 4195 32 178 -183 no_subtype FALSE canonical NA NA 3928 None 36 3 0 FALSE 0 0 NA C coding 1313 3939 62 4000 PB.6805.1 chr12 - 4571 20 full-splice_match CD163L1 ENST00000313599.7 4615 20 39 5 no_subtype FALSE canonical NA NA 50 None 3 3 1 FALSE 0 0 NA A coding 1453 4359 20 4378 PB.1853.2 chr2 - 1973 2 full-splice_match CXCR1 ENST00000295683.2 2488 2 30 485 no_subtype FALSE canonical NA NA 58 None 52 3 0 FALSE 0 0 NA C coding 350 1050 92 1141 PB.1853.3 chr2 - 1470 1 incomplete-splice_match CXCR1 ENST00000295683.2 2488 2 540 479 no_subtype FALSE canonical NA NA NA None 3 2 0 FALSE 0 0 NA C coding 186 558 75 632 PB.9721.8 chr19 + 2949 21 novel_in_catalog PNPLA6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2671 None 2 4 0 FALSE 0 0 NA C coding 859 2577 167 2743 PB.7287.1 chr12 - 4759 2 genic_intron novelGene_1027 novel NA NA NA NA no_subtype TRUE canonical NA NA 2370 None 2 53 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3377.1 chr5 - 2716 2 genic FAM172A novel NA NA NA NA no_subtype FALSE canonical NA NA 1366 None 7 25 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.255.1 chr1 + 1424 1 incomplete-splice_match AGO4 ENST00000373210.3 7116 18 3232 2461 no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5050.1 chr8 - 1706 1 genic_intron novelGene_931 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.391.1 chr1 + 2761 13 novel_not_in_catalog PCSK9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2416 None 2 4 1 TRUE 0 0 NA A coding 692 2076 312 2387 PB.1589.1 chr2 + 3541 10 novel_not_in_catalog PLEKHB2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1533 None 45 19 1 TRUE 0 0 NA B coding 222 666 125 790 PB.3584.1 chr5 - 3106 6 full-splice_match ZNF300 ENST00000394226.2 3256 6 142 8 no_subtype FALSE canonical NA NA 133 None 2 9 1 FALSE 0 0 NA A coding 604 1812 275 2086 PB.9521.1 chr18 - 3528 14 novel_in_catalog CDH2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 235 None 2 5 0 FALSE 0 0 NA A coding 821 2463 92 2554 PB.10432.14 chr20 - 5732 43 novel_not_in_catalog PREX1 novel NA NA NA NA no_subtype TRUE canonical NA NA 107 None 11 10 0 TRUE 0 0 NA B coding 1484 4452 414 4865 PB.5623.2 chr9 - 6779 20 novel_not_in_catalog NOTCH1 novel NA NA NA NA no_subtype FALSE canonical NA NA 74 None 4 17 0 TRUE 0 0 NA B coding 976 2928 2225 5152 PB.3672.2 chr5 + 2919 14 novel_not_in_catalog RGS14 novel NA NA NA NA no_subtype TRUE canonical NA NA 2196 None 6 25 1 FALSE 0 0 NA B coding 301 903 125 1027 PB.3184.1 chr5 - 1691 6 full-splice_match ZNF622 ENST00000308683.2 1699 6 -2 10 no_subtype FALSE canonical NA NA 754 None 33 0 0 FALSE 0 0 NA A coding 477 1431 130 1560 PB.8489.2 chr16 - 2052 6 novel_not_in_catalog IGSF6 novel NA NA NA NA no_subtype FALSE canonical NA NA 75 None 2 21 0 FALSE 0 0 NA C coding 219 657 9 665 PB.3414.1 chr5 - 1980 4 full-splice_match NREP ENST00000257435.11 2013 4 22 11 no_subtype FALSE canonical NA NA 101 None 5 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8489.1 chr16 - 960 6 full-splice_match IGSF6 ENST00000268389.5 2785 6 54 1771 no_subtype FALSE canonical NA NA 75 None 42 3 0 FALSE 0 0 NA C coding 241 723 9 731 PB.5245.1 chr9 - 3004 5 full-splice_match LRRC19 ENST00000380055.5 3609 5 79 526 no_subtype FALSE canonical NA NA 23 None 51 11 1 FALSE 0 0 NA A coding 370 1110 33 1142 PB.8489.5 chr16 - 1394 2 full-splice_match IGSF6 ENST00000565499.1 1184 2 2 -212 no_subtype FALSE canonical NA NA 75 None 9 4 0 FALSE 0 0 NA C coding 177 531 9 539 PB.5832.13 chr10 - 2685 13 novel_in_catalog PSAP novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 68 None 2 4 0 FALSE 0 0 NA B coding 505 1515 29 1543 PB.5832.12 chr10 - 2833 13 novel_in_catalog PSAP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 68 None 2 4 0 FALSE 0 0 NA B coding 466 1398 29 1426 PB.972.1 chr1 - 1680 9 full-splice_match CYB5R1 ENST00000367249.8 1651 9 -40 11 no_subtype FALSE canonical NA NA 130 None 14 3 0 FALSE 0 0 NA A coding 305 915 116 1030 PB.5590.1 chr9 - 3151 10 incomplete-splice_match SETX ENST00000224140.5 11100 26 -9 7958 internal_fragment FALSE canonical NA NA 78 None 5 3 1 FALSE 0 0 NA B coding 986 2958 193 3150 PB.5832.17 chr10 - 3185 12 novel_in_catalog PSAP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 68 None 4 6 1 FALSE 0 0 NA B coding 466 1398 29 1426 PB.5832.14 chr10 - 2637 13 novel_in_catalog PSAP novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 98 None 11 6 0 FALSE 0 0 NA B coding 480 1440 59 1498 PB.9089.1 chr17 + 694 6 full-splice_match RPL19 ENST00000225430.8 732 6 38 0 no_subtype FALSE canonical NA NA 491 None 12 1 0 FALSE 0 0 NA A coding 196 588 25 612 PB.7998.1 chr15 + 1447 9 full-splice_match KNSTRN ENST00000608100.5 1495 9 46 2 no_subtype FALSE canonical NA NA 671 None 6 3 0 FALSE 0 0 NA A coding 238 714 84 797 PB.5832.19 chr10 - 6475 14 novel_not_in_catalog PSAP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 68 None 2 35 1 TRUE 0 0 NA B coding 248 744 4591 5334 PB.5832.18 chr10 - 2773 14 novel_not_in_catalog PSAP novel NA NA NA NA no_subtype FALSE canonical NA NA 67 None 21 4 0 FALSE 0 0 NA B coding 535 1605 28 1632 PB.2596.1 chr3 + 1751 2 antisense novelGene_TBL1XR1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 21 None 9 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9729.1 chr19 + 1466 6 novel_not_in_catalog SNAPC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1374 None 16 7 1 TRUE 0 0 NA A coding 334 1002 14 1015 PB.7337.6 chr12 + 2677 1 incomplete-splice_match MLXIP ENST00000319080.11 8427 17 5741 10 no_subtype FALSE canonical NA NA NA None 8 23 0 FALSE 0 0 NA C coding 108 324 867 1190 PB.7337.3 chr12 + 4369 9 full-splice_match MLXIP ENST00000538698.5 5097 9 1194 -466 no_subtype FALSE canonical NA NA 1175 None 4 12 0 FALSE 0 0 NA C coding 331 993 302 1294 PB.7337.2 chr12 + 5903 10 novel_not_in_catalog MLXIP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4179 None 2 26 2 TRUE 0 0 NA C coding 198 594 2259 2852 PB.7337.1 chr12 + 6669 8 novel_in_catalog MLXIP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3475 None 2 19 0 FALSE 0 0 NA C coding 198 594 3001 3594 PB.5353.23 chr9 - 3080 17 novel_in_catalog ZCCHC6 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 140 None 2 10 0 FALSE 0 0 NA C coding 616 1848 172 2019 PB.2958.1 chr4 - 4316 1 genic_intron novelGene_826 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 39 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1565.1 chr2 + 1331 2 full-splice_match TMEM177 ENST00000401466.5 1346 2 11 4 no_subtype FALSE canonical NA NA 48 None 5 2 1 FALSE 0 0 NA C coding 311 933 71 1003 PB.1200.4 chr2 - 2649 1 genic_intron novelGene_144 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1781.2 chr2 + 2688 1 full-splice_match MARS2 ENST00000282276.7 3019 1 32 299 no_subtype FALSE canonical NA NA NA None 4 5 0 FALSE 0 0 NA C coding 593 1779 6 1784 PB.1019.6 chr1 + 3144 13 novel_not_in_catalog CD46 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1161 None 2 18 1 TRUE 0 0 NA B coding 341 1023 209 1231 PB.5353.21 chr9 - 4342 26 incomplete-splice_match ZCCHC6 ENST00000375963.7 5379 27 -20 1057 internal_fragment FALSE canonical NA NA 162 None 3 9 2 FALSE 0 0 NA C coding 1383 4149 194 4342 PB.10560.2 chr21 - 3075 8 full-splice_match DSCR3 ENST00000309117.10 3256 8 172 9 no_subtype FALSE canonical NA NA 123 None 2 22 0 FALSE 0 0 NA C coding 297 891 67 957 PB.10560.3 chr21 - 2938 9 novel_not_in_catalog DSCR3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 123 None 2 24 0 TRUE 0 0 NA C coding 297 891 67 957 PB.4239.8 chr6 + 6181 30 novel_not_in_catalog IGF2R novel NA NA NA NA no_subtype FALSE canonical NA NA 5879 None 4 10 0 TRUE 0 0 NA B coding 1526 4578 203 4780 PB.4643.2 chr7 + 5496 16 novel_in_catalog SND1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1895 None 5 15 0 FALSE 0 0 NA C coding 632 1896 227 2122 PB.3670.1 chr5 + 1237 5 full-splice_match PRELID1 ENST00000303204.8 1261 5 16 8 no_subtype FALSE canonical NA NA 707 None 12 6 0 FALSE 0 0 NA A coding 219 657 197 853 PB.1874.2 chr2 - 1621 5 novel_not_in_catalog TUBA4A novel NA NA NA NA no_subtype FALSE canonical NA NA 56 None 2 2 0 FALSE 0 0 NA C coding 433 1299 260 1558 PB.6603.10 chr11 - 1502 1 genic_intron novelGene_877 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.940.2 chr1 + 5546 1 genic_intron novelGene_1361 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 49 0 FALSE 0 0 NA A coding 115 345 4001 4345 PB.2978.1 chr4 + 3131 19 novel_not_in_catalog BANK1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2887 None 40 5 1 TRUE 0 0 NA B coding 785 2355 55 2409 PB.4814.1 chr8 + 3392 10 full-splice_match LPL ENST00000311322.8 3846 10 452 2 no_subtype FALSE canonical NA NA 1445 None 48 5 0 FALSE 0 0 NA A coding 475 1425 19 1443 PB.2978.3 chr4 + 1732 11 novel_not_in_catalog BANK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1657 None 10 0 0 TRUE 0 0 NA B coding 556 1668 64 1731 PB.8288.8 chr15 + 2865 3 novel_not_in_catalog SEMA4B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1137 None 3 15 0 TRUE 0 0 NA C coding 117 351 1524 1874 PB.7621.3 chr14 + 2101 1 novel_in_catalog NGDN novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7621.2 chr14 + 1127 11 full-splice_match NGDN ENST00000408901.7 1143 11 17 -1 no_subtype FALSE canonical NA NA 939 None 6 0 0 FALSE 0 0 NA C coding 315 945 12 956 PB.7621.1 chr14 + 2737 7 novel_in_catalog NGDN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 807 None 2 11 0 FALSE 0 0 NA C coding 151 453 14 466 PB.6920.1 chr12 + 2746 1 antisense novelGene_SLC38A2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 122 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1910.10 chr2 + 2529 2 novel_not_in_catalog CAB39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 602 None 2 16 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.1019.3 chr1 + 3165 11 novel_not_in_catalog CD46 novel NA NA NA NA no_subtype FALSE canonical NA NA 1181 None 2 19 1 FALSE 0 0 NA B coding 367 1101 151 1251 PB.837.4 chr1 - 1595 4 novel_in_catalog GPA33 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 154 None 2 5 0 FALSE 0 0 NA C coding 286 858 112 969 PB.5277.1 chr9 - 1269 10 full-splice_match STOML2 ENST00000356493.9 1278 10 -1 10 no_subtype FALSE canonical NA NA 109 None 12 0 0 FALSE 0 0 NA A coding 356 1068 65 1132 PB.7489.1 chr13 - 3584 9 full-splice_match CAB39L ENST00000355854.8 3676 9 81 11 no_subtype TRUE canonical NA NA 386 None 7 10 0 FALSE 0 0 NA A coding 334 1002 427 1428 PB.2032.2 chr3 - 2934 16 novel_in_catalog COLQ novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 193 None 10 14 1 FALSE 0 0 NA C coding 446 1338 88 1425 PB.10153.1 chr19 + 2213 15 full-splice_match PPP2R1A ENST00000322088.10 5380 15 50 3117 no_subtype FALSE canonical NA NA 1761 None 26 5 0 FALSE 0 0 NA C coding 589 1767 9 1775 PB.3785.18 chr6 - 2547 14 novel_in_catalog FAM65B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 111 None 140 1 0 FALSE 0 0 NA C coding 642 1926 51 1976 PB.2032.1 chr3 - 2965 17 full-splice_match COLQ ENST00000383788.9 3005 17 39 1 no_subtype FALSE canonical NA NA 193 None 11 14 2 FALSE 0 0 NA C coding 455 1365 88 1452 PB.2596.3 chr3 + 1372 1 antisense novelGene_TBL1XR1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3785.17 chr6 - 2124 15 novel_not_in_catalog FAM65B novel NA NA NA NA no_subtype TRUE canonical NA NA 111 None 6 2 0 TRUE 0 0 NA C coding 620 1860 51 1910 PB.3451.2 chr5 + 2913 1 incomplete-splice_match PRRC1 ENST00000296666.12 4699 9 1781 6 no_subtype FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3785.15 chr6 - 3589 22 novel_in_catalog FAM65B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 269 None 3 1 0 FALSE 0 0 NA C coding 1018 3054 296 3349 PB.3785.13 chr6 - 3481 22 novel_not_in_catalog FAM65B novel NA NA NA NA no_subtype FALSE canonical NA NA 160 None 2 3 1 FALSE 0 0 NA C coding 1052 3156 85 3240 PB.1879.1 chr2 + 1541 5 full-splice_match SPEG ENST00000396688.5 1457 5 -65 -19 no_subtype TRUE canonical NA NA 737 None 3 3 0 FALSE 0 0 NA C coding 113 339 404 742 PB.277.2 chr1 + 1688 9 novel_not_in_catalog UTP11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1579 None 2 5 0 TRUE 0 0 NA C coding 253 759 61 819 PB.277.1 chr1 + 1602 8 full-splice_match UTP11 ENST00000373014.4 2019 8 -8 425 no_subtype FALSE canonical NA NA 747 None 6 3 0 FALSE 0 0 NA C coding 253 759 70 828 PB.4892.2 chr8 + 3240 15 novel_not_in_catalog GPAT4 novel NA NA NA NA no_subtype FALSE canonical NA NA 2224 None 2 7 1 TRUE 0 0 NA B coding 456 1368 963 2330 PB.4892.3 chr8 + 2499 14 novel_not_in_catalog GPAT4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1483 None 4 2 0 TRUE 0 0 NA B coding 456 1368 222 1589 PB.1910.11 chr2 + 1454 1 incomplete-splice_match CAB39 ENST00000258418.9 3826 9 2361 12 no_subtype FALSE canonical NA NA NA None 4 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4892.1 chr8 + 3196 15 novel_not_in_catalog GPAT4 novel NA NA NA NA no_subtype TRUE canonical NA NA 2180 None 56 3 0 TRUE 0 0 NA B coding 456 1368 919 2286 PB.4324.2 chr7 - 2715 10 novel_not_in_catalog FAM126A novel NA NA NA NA no_subtype FALSE canonical NA NA 206 None 2 4 0 TRUE 0 0 NA B coding 139 417 235 651 PB.4239.3 chr6 + 7013 36 novel_not_in_catalog IGF2R novel NA NA NA NA no_subtype TRUE canonical NA NA 6712 None 4 9 0 TRUE 0 0 NA B coding 1788 5364 250 5613 PB.4324.1 chr7 - 2788 12 novel_not_in_catalog FAM126A novel NA NA NA NA no_subtype FALSE canonical NA NA 206 None 22 8 0 TRUE 0 0 NA B coding 521 1563 235 1797 PB.7327.1 chr12 - 1884 15 novel_in_catalog CAMKK2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 72 None 10 2 0 FALSE 0 0 NA C coding 498 1494 132 1625 PB.7327.2 chr12 - 2049 16 full-splice_match CAMKK2 ENST00000412367.6 2006 16 -59 16 no_subtype FALSE canonical NA NA 108 None 13 3 0 FALSE 0 0 NA C coding 541 1623 168 1790 PB.2463.7 chr3 - 1634 5 novel_not_in_catalog CNBP novel NA NA NA NA no_subtype FALSE canonical NA NA 120 None 159 4 1 FALSE 0 0 NA B coding 107 321 349 669 PB.7327.4 chr12 - 5540 15 novel_not_in_catalog CAMKK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 72 None 2 41 0 FALSE 0 0 NA C coding 267 801 132 932 PB.7327.5 chr12 - 6258 1 novel_in_catalog CAMKK2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 47 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7943.2 chr14 - 2692 1 antisense novelGene_MARK3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6728.1 chr11 - 6260 5 genic ST3GAL4-AS1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 6173 None 8 46 1 TRUE 0 0 NA A coding 168 504 2187 2690 PB.9738.7 chr19 - 3829 29 full-splice_match MYO1F ENST00000613525.4 4296 29 146 321 no_subtype FALSE canonical NA NA 125 None 188 7 1 FALSE 0 0 NA C coding 1098 3294 123 3416 PB.3869.2 chr6 + 3699 11 novel_not_in_catalog PPARD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1355 None 2 16 3 TRUE 0 0 NA B coding 441 1323 278 1600 PB.2008.1 chr3 + 4577 16 novel_not_in_catalog CAND2 novel NA NA NA NA no_subtype TRUE canonical NA NA 3531 None 3 14 0 TRUE 0 0 NA A coding 1236 3708 49 3756 PB.2463.9 chr3 - 1607 6 novel_not_in_catalog CNBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 119 None 7 5 2 TRUE 0 0 NA B coding 169 507 134 640 PB.8354.1 chr16 - 2085 11 full-splice_match NARFL ENST00000251588.6 2112 11 5 22 no_subtype FALSE canonical NA NA 78 None 6 6 1 FALSE 0 0 NA A coding 476 1428 13 1440 PB.4091.1 chr6 - 2833 2 novel_not_in_catalog FYN novel NA NA NA NA no_subtype FALSE canonical NA NA 544 None 3 16 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.5267.1 chr9 - 4165 3 novel_not_in_catalog KIAA1161 novel NA NA NA NA no_subtype TRUE canonical NA NA 73 None 4 24 0 TRUE 0 0 NA A coding 714 2142 137 2278 PB.4915.1 chr8 + 3687 2 genic_intron novelGene_514 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 295 None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1019.9 chr1 + 3256 14 novel_not_in_catalog CD46 novel NA NA NA NA no_subtype FALSE canonical NA NA 1268 None 24 16 0 TRUE 0 0 NA B coding 377 1131 94 1224 PB.7248.1 chr12 - 884 7 full-splice_match ARPC3 ENST00000228825.11 1014 7 51 79 no_subtype FALSE canonical NA NA 102 None 9 1 0 FALSE 0 0 NA A coding 178 534 97 630 PB.3558.9 chr5 - 2528 2 novel_in_catalog NR3C1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 53 None 2 11 0 FALSE 0 0 NA C coding 395 1185 67 1251 PB.5544.1 chr9 + 3279 16 full-splice_match GLE1 ENST00000309971.8 3321 16 34 8 no_subtype FALSE canonical NA NA 2100 None 55 7 0 FALSE 0 0 NA A coding 698 2094 73 2166 PB.6280.1 chr11 + 3857 9 novel_in_catalog PRR5L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1000 None 15 18 0 FALSE 0 0 NA A coding 353 1059 334 1392 PB.3717.1 chr6 + 1885 1 full-splice_match FAM50B ENST00000380274.1 1932 1 35 12 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A coding 325 975 392 1366 PB.5853.1 chr10 - 3919 15 novel_not_in_catalog NDST2 novel NA NA NA NA no_subtype FALSE canonical NA NA 289 None 3 6 0 FALSE 0 0 NA A coding 883 2649 731 3379 PB.679.2 chr1 + 2993 12 novel_not_in_catalog TUFT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1055 None 2 15 2 TRUE 0 0 NA C coding 152 456 661 1116 PB.679.3 chr1 + 2941 11 full-splice_match TUFT1 ENST00000392712.7 2946 11 3 2 no_subtype FALSE canonical NA NA 1003 None 4 8 0 FALSE 0 0 NA C coding 335 1005 60 1064 PB.10728.1 chr22 - 1433 13 full-splice_match RBFOX2 ENST00000449924.6 1935 13 5 497 no_subtype FALSE non_canonical NA NA 211 None 5 1 0 FALSE 0 0 NA A coding 375 1125 200 1324 PB.10929.1 chrX + 3919 16 novel_not_in_catalog MAOA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2777 None 77 12 1 TRUE 0 0 NA C coding 527 1581 66 1646 PB.8115.1 chr15 + 1423 1 genic_intron novelGene_564 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7747.10 chr14 + 2058 1 genic_intron novelGene_592 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10143.2 chr19 - 1663 4 antisense novelGene_FPR3_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 253 None 2 17 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.1819.1 chr2 - 3837 11 novel_not_in_catalog INO80D novel NA NA NA NA no_subtype FALSE canonical NA NA 104 None 2 1 0 FALSE 0 0 NA A coding 1027 3081 228 3308 PB.3306.1 chr5 - 1156 3 full-splice_match TAF9 ENST00000217893.9 1283 3 126 1 no_subtype FALSE canonical NA NA 54 None 6 2 0 FALSE 0 0 NA A coding 264 792 165 956 PB.9249.1 chr17 - 2616 7 full-splice_match COIL ENST00000240316.4 2650 7 14 20 no_subtype FALSE canonical NA NA 266 None 3 6 0 FALSE 0 0 NA A coding 576 1728 22 1749 PB.785.1 chr1 - 1803 8 full-splice_match PEX19 ENST00000368072.9 3661 8 10 1848 no_subtype FALSE canonical NA NA 82 None 25 2 0 FALSE 0 0 NA C coding 299 897 13 909 PB.785.2 chr1 - 3486 7 full-splice_match PEX19 ENST00000472750.5 3504 7 8 10 no_subtype FALSE canonical NA NA 92 None 4 10 0 FALSE 0 0 NA C coding 209 627 183 809 PB.1580.1 chr2 - 3718 1 novel_in_catalog WDR33 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 32 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7495.1 chr13 - 1243 5 full-splice_match SPRYD7 ENST00000361840.7 3053 5 48 1762 no_subtype FALSE canonical NA NA 163 None 7 3 0 FALSE 0 0 NA A coding 196 588 58 645 PB.7780.1 chr14 - 3084 22 novel_not_in_catalog ACTN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 351 None 139 2 0 TRUE 0 0 NA B coding 887 2661 247 2907 PB.2631.1 chr3 - 3240 24 full-splice_match CLCN2 ENST00000265593.8 3290 24 46 4 no_subtype TRUE canonical NA NA 189 None 16 1 0 FALSE 0 0 NA C coding 898 2694 127 2820 PB.267.3 chr1 + 2677 6 full-splice_match ZC3H12A ENST00000373087.6 2684 6 -11 18 no_subtype FALSE canonical NA NA 1052 None 28 2 0 FALSE 0 0 NA C coding 599 1797 128 1924 PB.267.2 chr1 + 2769 6 novel_not_in_catalog ZC3H12A novel NA NA NA NA no_subtype FALSE canonical NA NA 1144 None 2 7 0 FALSE 0 0 NA C coding 394 1182 140 1321 PB.5756.2 chr10 - 3431 4 full-splice_match CXCL12 ENST00000374429.6 3532 4 -5 106 no_subtype FALSE canonical NA NA 153 None 80 20 0 FALSE 0 0 NA C coding 93 279 93 371 PB.267.4 chr1 + 3225 5 novel_in_catalog ZC3H12A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1600 None 2 5 0 FALSE 0 0 NA C coding 599 1797 676 2472 PB.604.1 chr1 - 2734 2 antisense novelGene_PTGFRN_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1643 None 10 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5405.2 chr9 + 1864 8 full-splice_match STX17 ENST00000259400.10 2713 8 44 805 no_subtype FALSE canonical NA NA 761 None 5 5 0 FALSE 0 0 NA C coding 302 906 93 998 PB.1351.1 chr2 - 5835 1 novel_in_catalog BCL11A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA B coding 100 300 1650 1949 PB.6429.1 chr11 + 2996 23 novel_not_in_catalog CAPN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2267 None 6 3 1 TRUE 0 0 NA C coding 714 2142 150 2291 PB.4353.1 chr7 - 2101 1 novel_in_catalog NOD1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA B coding 111 333 1664 1996 PB.2163.1 chr3 + 3888 23 full-splice_match DHX30 ENST00000395745.6 3887 23 1 -2 no_subtype FALSE canonical NA NA 3560 None 4 0 0 FALSE 0 0 NA C coding 1155 3465 347 3811 PB.1712.3 chr2 - 1351 4 full-splice_match ATP5G3 ENST00000497075.5 1313 4 0 -38 no_subtype FALSE canonical NA NA 55 None 3 6 0 FALSE 0 0 NA C coding 105 315 129 443 PB.2163.3 chr3 + 3753 19 full-splice_match DHX30 ENST00000457607.1 3748 19 -5 0 no_subtype FALSE canonical NA NA 3432 None 63 0 0 FALSE 0 0 NA C coding 1215 3645 39 3683 PB.2163.2 chr3 + 3834 22 full-splice_match DHX30 ENST00000445061.5 4065 22 227 4 no_subtype FALSE canonical NA NA 3511 None 22 1 1 FALSE 0 0 NA C coding 1194 3582 181 3762 PB.2195.1 chr3 - 1987 9 full-splice_match AMT ENST00000273588.8 2280 9 295 -2 no_subtype TRUE canonical NA NA 98 None 3 2 0 FALSE 0 0 NA A coding 403 1209 9 1217 PB.3022.3 chr4 - 614 2 full-splice_match C4orf3 ENST00000504110.1 667 2 255 -202 no_subtype FALSE canonical NA NA 331 None 2 1 0 FALSE 0 0 NA A coding 66 198 132 329 PB.778.4 chr1 - 1436 5 novel_not_in_catalog TAGLN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 134 None 14 3 1 TRUE 0 0 NA B coding 199 597 153 749 PB.11068.1 chrX - 3286 1 genic_intron novelGene_781 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9992.8 chr19 - 4562 12 incomplete-splice_match FCGBP ENST00000616721.4 12787 28 8212 13 5prime_fragment FALSE canonical NA NA 184 None 27 4 0 FALSE 0 0 NA B coding 1186 3558 851 4408 PB.8300.1 chr15 + 2732 19 full-splice_match FES ENST00000328850.7 2829 19 93 4 no_subtype FALSE canonical NA NA 2375 None 88 4 0 FALSE 0 0 NA C coding 822 2466 50 2515 PB.8300.2 chr15 + 2780 19 novel_in_catalog FES novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2422 None 7 0 0 FALSE 0 0 NA C coding 542 1626 62 1687 PB.8300.3 chr15 + 2647 18 novel_in_catalog FES novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2290 None 2 0 0 FALSE 0 0 NA C coding 782 2346 85 2430 PB.7106.1 chr12 + 5900 13 novel_not_in_catalog MDM2 novel NA NA NA NA no_subtype TRUE canonical NA NA 5664 None 6 48 0 TRUE 0 0 NA B coding 486 1458 335 1792 PB.9620.1 chr19 - 1276 6 full-splice_match PLPP2 ENST00000434325.6 1383 6 97 10 no_subtype FALSE canonical NA NA 123 None 4 5 0 FALSE 0 0 NA A coding 288 864 72 935 PB.9992.2 chr19 - 3360 10 novel_not_in_catalog FCGBP novel NA NA NA NA no_subtype FALSE canonical NA NA 17 None 7 1 1 TRUE 0 0 NA B coding 454 1362 1833 3194 PB.9992.3 chr19 - 2722 8 novel_not_in_catalog FCGBP novel NA NA NA NA no_subtype FALSE canonical NA NA 544 None 4 1 1 TRUE 0 0 NA B coding 454 1362 1199 2560 PB.7106.5 chr12 + 2853 12 novel_not_in_catalog MDM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2440 None 2 13 0 TRUE 0 0 NA B coding 486 1458 83 1540 PB.7106.4 chr12 + 5713 13 novel_not_in_catalog MDM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 5463 None 7 50 0 TRUE 0 0 NA B coding 486 1458 134 1591 PB.10437.1 chr20 - 2592 3 full-splice_match SPATA2 ENST00000289431.9 4022 3 -10 1440 no_subtype FALSE canonical NA NA 139 None 13 6 0 FALSE 0 0 NA A coding 520 1560 242 1801 PB.5877.7 chr10 - 2896 14 novel_in_catalog ANXA11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 144 None 2 10 1 FALSE 0 0 NA C coding 236 708 1652 2359 PB.8260.1 chr15 - 474 5 full-splice_match RPS17 ENST00000330244.10 592 5 112 6 no_subtype FALSE canonical NA NA 27 None 2 1 0 FALSE 0 0 NA A coding 135 405 25 429 PB.6029.1 chr10 - 1938 2 genic_intron novelGene_999 novel NA NA NA NA no_subtype TRUE canonical NA NA 1351 None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5877.3 chr10 - 2499 16 novel_not_in_catalog ANXA11 novel NA NA NA NA no_subtype TRUE canonical NA NA 140 None 2 3 0 FALSE 0 0 NA C coding 505 1515 266 1780 PB.5877.1 chr10 - 2182 15 full-splice_match ANXA11 ENST00000372231.7 6720 15 102 4436 no_subtype FALSE canonical NA NA 128 None 43 2 0 FALSE 0 0 NA C coding 505 1515 137 1651 PB.9513.1 chr18 - 3238 10 full-splice_match ANKRD29 ENST00000592179.5 3361 10 121 2 no_subtype FALSE canonical NA NA 55 None 4 10 0 FALSE 0 0 NA A coding 301 903 35 937 PB.5576.1 chr9 + 3351 7 novel_not_in_catalog AIF1L novel NA NA NA NA no_subtype FALSE canonical NA NA 444 None 12 18 0 TRUE 0 0 NA A coding 150 450 80 529 PB.9976.2 chr19 - 1853 16 full-splice_match SIRT2 ENST00000249396.11 2070 16 205 12 no_subtype FALSE canonical NA NA 113 None 4 5 0 FALSE 0 0 NA C coding 389 1167 98 1264 PB.9976.3 chr19 - 1728 15 novel_not_in_catalog SIRT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 28 None 2 5 1 TRUE 0 0 NA C coding 372 1116 21 1136 PB.9976.1 chr19 - 1771 15 full-splice_match SIRT2 ENST00000392081.6 2062 15 279 12 no_subtype FALSE canonical NA NA 78 None 22 6 1 FALSE 0 0 NA C coding 352 1056 127 1182 PB.9976.4 chr19 - 1817 15 novel_not_in_catalog SIRT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 129 None 2 7 1 TRUE 0 0 NA C coding 377 1131 119 1249 PB.5954.1 chr10 + 2499 2 incomplete-splice_match PI4K2A ENST00000370631.3 4189 9 1297 393 internal_fragment FALSE canonical NA NA 38 None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.330.1 chr1 - 3537 4 full-splice_match TMEM53 ENST00000372243.7 1579 4 -8 -1950 no_subtype FALSE canonical NA NA 140 None 3 6 0 FALSE 0 0 NA A coding 111 333 80 412 PB.10427.2 chr20 + 1496 1 antisense novelGene_ZMYND8_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5785.1 chr10 + 1521 4 full-splice_match DKK1 ENST00000373970.3 1790 4 -14 283 no_subtype FALSE canonical NA NA 700 None 3 3 0 FALSE 0 0 NA A coding 265 795 157 951 PB.8076.2 chr15 + 1563 4 full-splice_match FGF7 ENST00000560765.6 1089 4 2 -476 no_subtype FALSE canonical NA NA 837 None 7 4 0 FALSE 0 0 NA C coding 194 582 448 1029 PB.2286.1 chr3 + 1441 2 genic_intron novelGene_626 novel NA NA NA NA no_subtype FALSE canonical NA NA 1138 None 2 7 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7844.2 chr14 - 1705 1 incomplete-splice_match SEL1L ENST00000336735.8 7925 21 4844 1377 no_subtype FALSE canonical NA NA NA None 3 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8782.1 chr16 + 3245 14 full-splice_match USP10 ENST00000219473.11 3009 14 101 -337 no_subtype FALSE canonical NA NA 2221 None 107 0 0 FALSE 0 0 NA A coding 798 2394 13 2406 PB.7844.1 chr14 - 2894 21 full-splice_match SEL1L ENST00000336735.8 7925 21 10 5021 no_subtype FALSE canonical NA NA 177 None 15 17 0 FALSE 0 0 NA C coding 794 2382 108 2489 PB.2942.2 chr4 - 2816 12 novel_not_in_catalog SPARCL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 422 None 128 6 1 TRUE 0 0 NA A coding 664 1992 434 2425 PB.9116.1 chr17 - 2663 7 novel_not_in_catalog KRT222 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 153 None 2 22 1 TRUE 0 0 NA A coding 295 885 58 942 PB.6899.1 chr12 + 2707 1 incomplete-splice_match FGD4 ENST00000427716.6 8242 17 4371 1165 no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9440.3 chr17 - 1314 1 incomplete-splice_match ARHGDIA ENST00000269321.11 1906 6 586 7 no_subtype FALSE canonical NA NA NA None 3 4 0 FALSE 0 0 NA C coding 157 471 729 1199 PB.8415.1 chr16 - 2767 6 full-splice_match CDIP1 ENST00000563332.6 2774 6 -28 35 no_subtype FALSE canonical NA NA 174 None 2 13 0 FALSE 0 0 NA C coding 208 624 279 902 PB.9951.1 chr19 + 1392 11 full-splice_match CAPNS1 ENST00000246533.7 1918 11 525 1 no_subtype FALSE canonical NA NA 853 None 5 5 0 FALSE 0 0 NA A coding 268 804 74 877 PB.11172.1 chrX - 1514 2 antisense novelGene_FHL1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 24 None 3 2 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5469.3 chr9 - 5627 21 novel_in_catalog TNC novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 176 None 30 2 0 FALSE 0 0 NA B coding 1564 4692 313 5004 PB.4686.1 chr7 + 3068 15 full-splice_match CALD1 ENST00000361675.6 3612 15 54 490 no_subtype FALSE canonical NA NA 2551 None 18 1 0 FALSE 0 0 NA C coding 793 2379 176 2554 PB.6109.1 chr11 - 1730 10 full-splice_match RNH1 ENST00000356187.9 1791 10 102 -41 no_subtype FALSE canonical NA NA 86 None 64 3 0 FALSE 0 0 NA C coding 461 1383 174 1556 PB.6109.3 chr11 - 1841 10 full-splice_match RNH1 ENST00000397614.5 1864 10 17 6 no_subtype FALSE canonical NA NA 196 None 5 4 1 FALSE 0 0 NA C coding 461 1383 284 1666 PB.6109.2 chr11 - 1725 10 novel_in_catalog RNH1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 79 None 7 8 0 FALSE 0 0 NA C coding 461 1383 167 1549 PB.827.1 chr1 - 3020 1 antisense novelGene_PBX1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1313.1 chr2 - 6715 1 genic_intron novelGene_451 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 44 0 FALSE 0 0 NA A coding 116 348 1660 2007 PB.952.2 chr1 - 1496 6 full-splice_match TMEM9 ENST00000367334.9 1529 6 29 4 no_subtype FALSE canonical NA NA 21 None 21 5 0 FALSE 0 0 NA A coding 183 549 58 606 PB.9931.1 chr19 + 1579 11 novel_in_catalog HPN novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 1259 None 3 0 0 FALSE 0 0 NA A coding 417 1251 45 1295 PB.376.3 chr1 - 3209 4 novel_in_catalog C1orf123 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2433 None 2 18 0 FALSE 0 0 NA B coding 119 357 2296 2652 PB.4989.1 chr8 - 2298 1 incomplete-splice_match PAG1 ENST00000220597.4 10744 9 6127 2320 no_subtype FALSE canonical NA NA NA None 5 10 0 FALSE 0 0 NA C coding 174 522 1401 1922 PB.376.1 chr1 - 2779 6 novel_in_catalog C1orf123 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 39 None 5 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8409.2 chr16 + 2845 2 novel_not_in_catalog VASN novel NA NA NA NA no_subtype FALSE non_canonical NA NA 115 None 2 16 1 TRUE 0 0 NA C coding 673 2019 216 2234 PB.3876.1 chr6 + 3462 14 novel_not_in_catalog MAPK14 novel NA NA NA NA no_subtype FALSE canonical NA NA 1084 None 2 16 0 TRUE 0 0 NA B coding 283 849 301 1149 PB.8409.1 chr16 + 2795 2 full-splice_match VASN ENST00000304735.3 2806 2 1 10 no_subtype FALSE canonical NA NA 145 None 12 6 0 FALSE 0 0 NA C coding 673 2019 155 2173 PB.7270.1 chr12 - 913 7 full-splice_match RPL6 ENST00000202773.13 947 7 36 -2 no_subtype FALSE canonical NA NA 19 None 15 1 0 FALSE 0 0 NA A coding 288 864 20 883 PB.2892.1 chr4 + 2515 10 full-splice_match SEPT11 ENST00000264893.10 5593 10 109 2969 no_subtype FALSE canonical NA NA 1366 None 28 7 0 FALSE 0 0 NA C coding 429 1287 93 1379 PB.5820.3 chr10 - 2915 7 novel_not_in_catalog SAR1A novel NA NA NA NA no_subtype FALSE canonical NA NA 38 None 8 15 1 FALSE 0 0 NA C coding 198 594 55 648 PB.4995.1 chr8 + 3067 6 novel_not_in_catalog CHMP4C novel NA NA NA NA no_subtype FALSE canonical NA NA 1300 None 8 14 1 TRUE 0 0 NA A coding 233 699 104 802 PB.75.1 chr1 + 1867 1 incomplete-splice_match DDI2 ENST00000480945.5 10625 10 8752 7 no_subtype FALSE canonical NA NA NA None 3 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8487.1 chr16 - 4273 26 novel_not_in_catalog SMG1P3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 504 None 2 18 1 TRUE 0 0 NA A coding 433 1299 395 1693 PB.1856.2 chr2 - 1634 12 novel_not_in_catalog AAMP novel NA NA NA NA no_subtype FALSE canonical NA NA 197 None 3 2 1 TRUE 0 0 NA C coding 434 1302 77 1378 PB.5146.1 chr8 + 2215 3 novel_not_in_catalog THEM6 novel NA NA NA NA no_subtype TRUE canonical NA NA 616 None 2 18 0 TRUE 0 0 NA A coding 208 624 98 721 PB.4968.1 chr8 - 1366 2 full-splice_match MSC ENST00000325509.4 2023 2 636 21 no_subtype FALSE canonical NA NA 188 None 11 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7130.1 chr12 - 7150 24 novel_not_in_catalog OSBPL8 novel NA NA NA NA no_subtype FALSE canonical NA NA 338 None 2 37 1 FALSE 0 0 NA B coding 867 2601 467 3067 PB.3976.1 chr6 + 1436 3 full-splice_match BAG2 ENST00000370693.5 6651 3 315 4900 no_subtype FALSE canonical NA NA 280 None 2 10 0 FALSE 0 0 NA A coding 191 573 118 690 PB.7643.1 chr14 - 3232 1 novel_in_catalog GZMB novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA B coding 136 408 870 1277 PB.7720.4 chr14 + 946 6 full-splice_match LGALS3 ENST00000254301.13 1146 6 215 -15 no_subtype FALSE canonical NA NA 643 None 29 4 0 FALSE 0 0 NA C coding 250 750 47 796 PB.7720.3 chr14 + 1591 5 novel_in_catalog LGALS3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1303 None 8 9 1 FALSE 0 0 NA C coding 105 315 732 1046 PB.3707.3 chr6 - 3762 29 novel_not_in_catalog EXOC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 381 None 2 15 0 TRUE 0 0 NA B coding 924 2772 425 3196 PB.7720.1 chr14 + 2044 4 genic MAPK1IP1L novel NA NA NA NA no_subtype TRUE non_canonical NA NA 271 None 6 23 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.3707.1 chr6 - 3489 29 novel_not_in_catalog EXOC2 novel NA NA NA NA no_subtype TRUE canonical NA NA 106 None 13 4 0 TRUE 0 0 NA B coding 924 2772 150 2921 PB.3632.3 chr5 + 2075 8 novel_not_in_catalog MAT2B novel NA NA NA NA no_subtype FALSE canonical NA NA 942 None 2 4 0 TRUE 0 0 NA C coding 334 1002 109 1110 PB.3632.2 chr5 + 1812 7 full-splice_match MAT2B ENST00000321757.10 2103 7 114 177 no_subtype FALSE canonical NA NA 859 None 54 7 0 FALSE 0 0 NA C coding 334 1002 26 1027 PB.3632.1 chr5 + 1831 7 full-splice_match MAT2B ENST00000280969.9 2226 7 206 189 no_subtype FALSE canonical NA NA 876 None 5 6 0 FALSE 0 0 NA C coding 323 969 76 1044 PB.6703.46 chr11 + 1373 2 novel_not_in_catalog SORL1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 313 None 75 5 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.3632.5 chr5 + 767 1 incomplete-splice_match MAT2B ENST00000521838.2 1526 3 585 175 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8401.2 chr16 + 3117 9 novel_not_in_catalog NAA60 novel NA NA NA NA no_subtype FALSE canonical NA NA 3001 None 2 16 0 TRUE 0 0 NA B coding 177 531 306 836 PB.2905.10 chr4 - 5614 1 genic_intron novelGene_746 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 39 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6617.11 chr11 - 2012 11 novel_not_in_catalog CASP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 33 None 2 3 0 TRUE 0 0 NA C coding 249 747 1153 1899 PB.8401.1 chr16 + 2553 8 novel_not_in_catalog NAA60 novel NA NA NA NA no_subtype FALSE canonical NA NA 1071 None 6 13 0 TRUE 0 0 NA B coding 177 531 332 862 PB.11167.1 chrX - 3166 6 novel_not_in_catalog ZNF75D novel NA NA NA NA no_subtype FALSE canonical NA NA 150 None 3 10 1 TRUE 0 0 NA A coding 206 618 390 1007 PB.3791.3 chr6 + 2726 9 novel_not_in_catalog TRIM38 novel NA NA NA NA no_subtype FALSE canonical NA NA 1183 None 12 2 1 TRUE 0 0 NA B coding 465 1395 310 1704 PB.3791.2 chr6 + 3265 7 novel_not_in_catalog TRIM38 novel NA NA NA NA no_subtype FALSE canonical NA NA 926 None 6 13 0 FALSE 0 0 NA B coding 465 1395 53 1447 PB.3791.1 chr6 + 3487 9 novel_not_in_catalog TRIM38 novel NA NA NA NA no_subtype FALSE canonical NA NA 1148 None 32 13 1 TRUE 0 0 NA B coding 465 1395 275 1669 PB.3813.17 chr6 - 3686 26 novel_in_catalog BAG6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 96 None 6 2 0 FALSE 0 0 NA C coding 1162 3486 110 3595 PB.3791.7 chr6 + 3467 10 novel_not_in_catalog TRIM38 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3009 None 4 14 2 TRUE 0 0 NA B coding 465 1395 275 1669 PB.3791.6 chr6 + 3103 9 novel_not_in_catalog TRIM38 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2861 None 2 12 2 TRUE 0 0 NA B coding 465 1395 127 1521 PB.3791.5 chr6 + 3503 10 novel_not_in_catalog TRIM38 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3044 None 4 15 2 TRUE 0 0 NA B coding 465 1395 310 1704 PB.7106.9 chr12 + 3063 1 genic_intron novelGene_654 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3791.8 chr6 + 3582 9 novel_not_in_catalog TRIM38 novel NA NA NA NA no_subtype FALSE canonical NA NA 1243 None 2 14 1 TRUE 0 0 NA B coding 465 1395 370 1764 PB.3813.18 chr6 - 3570 24 novel_not_in_catalog BAG6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 232 None 2 6 1 TRUE 0 0 NA C coding 1074 3222 246 3467 PB.4779.1 chr8 - 3235 3 full-splice_match TDRP ENST00000324079.10 3395 3 164 -4 no_subtype FALSE canonical NA NA 185 None 3 23 0 FALSE 0 0 NA A coding 185 555 78 632 PB.7866.1 chr14 - 1348 11 full-splice_match ATXN3 ENST00000558190.5 26812 11 28 25436 no_subtype FALSE canonical NA NA 54 None 4 1 0 FALSE 0 0 NA A coding 361 1083 31 1113 PB.1407.1 chr2 + 1210 10 full-splice_match NAGK ENST00000244204.10 1154 10 16 -72 no_subtype FALSE canonical NA NA 890 None 6 0 0 FALSE 0 0 NA C coding 344 1032 47 1078 PB.2016.1 chr3 - 1403 4 novel_not_in_catalog CHCHD4 novel NA NA NA NA no_subtype TRUE canonical NA NA 196 None 5 10 0 TRUE 0 0 NA A coding 142 426 175 600 PB.2904.1 chr4 - 3572 6 full-splice_match PAQR3 ENST00000512733.5 9811 6 171 6068 no_subtype TRUE canonical NA NA 228 None 2 21 0 FALSE 0 0 NA A coding 311 933 44 976 PB.4849.7 chr8 + 2474 1 incomplete-splice_match BNIP3L ENST00000380629.6 3610 6 1125 12 no_subtype FALSE canonical NA NA NA None 5 21 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4849.5 chr8 + 3282 1 genic_intron novelGene_255 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4849.3 chr8 + 1209 6 full-splice_match BNIP3L ENST00000518611.5 1352 6 63 80 no_subtype FALSE canonical NA NA 604 None 13 5 0 FALSE 0 0 NA C coding 179 537 114 650 PB.4849.1 chr8 + 1497 6 full-splice_match BNIP3L ENST00000380629.6 3610 6 190 1923 no_subtype FALSE canonical NA NA 654 None 23 6 0 FALSE 0 0 NA C coding 219 657 44 700 PB.1197.1 chr2 + 3202 2 full-splice_match FAM84A ENST00000295092.2 6355 2 57 3096 no_subtype FALSE canonical NA NA 195 None 34 10 0 FALSE 0 0 NA A coding 292 876 232 1107 PB.7809.1 chr14 + 2882 11 novel_in_catalog BBOF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1478 None 2 9 0 FALSE 0 0 NA A coding 389 1167 321 1487 PB.6129.1 chr11 - 1448 9 full-splice_match CTSD ENST00000236671.6 2123 9 113 562 no_subtype FALSE canonical NA NA 88 None 20 2 0 FALSE 0 0 NA A coding 412 1236 21 1256 PB.7959.241 chr14 - 1515 12 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 7 4 TRUE 0 0 NA B coding 196 588 803 1390 PB.350.3 chr1 - 1761 9 full-splice_match ATPAF1 ENST00000574428.5 1760 9 0 -1 no_subtype FALSE canonical NA NA 308 None 4 3 0 FALSE 0 0 NA A coding 328 984 43 1026 PB.7959.243 chr14 - 1502 11 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 56 None 2 13 4 TRUE 0 0 NA B coding 196 588 797 1384 PB.7959.242 chr14 - 1502 9 fusion IGHV4-28,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 11 4 TRUE 0 0 NA B coding 196 588 790 1377 PB.10649.2 chr22 + 3906 7 novel_not_in_catalog SNAP29 novel NA NA NA NA no_subtype TRUE canonical NA NA 3523 None 9 20 1 TRUE 0 0 NA B coding 258 774 75 848 PB.4444.1 chr7 + 1493 1 genic GTF2IP4 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10649.1 chr22 + 3936 7 novel_not_in_catalog SNAP29 novel NA NA NA NA no_subtype TRUE canonical NA NA 3729 None 5 20 0 TRUE 0 0 NA B coding 258 774 101 874 PB.7959.248 chr14 - 2413 7 novel_not_in_catalog IGHM novel NA NA NA NA no_subtype FALSE canonical NA NA 734 None 4 3 0 TRUE 0 0 NA B coding 396 1188 968 2155 PB.709.2 chr1 - 2823 11 full-splice_match PBXIP1 ENST00000368463.7 3212 11 5 384 no_subtype FALSE canonical NA NA 31 None 54 7 0 FALSE 0 0 NA A coding 731 2193 68 2260 PB.634.2 chr1 + 2959 25 novel_not_in_catalog CHD1L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2630 None 2 13 4 TRUE 0 0 NA C coding 784 2352 355 2706 PB.10405.3 chr20 + 1855 1 genic_intron novelGene_445 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2522.1 chr3 + 3836 17 full-splice_match HPS3 ENST00000296051.6 4665 17 53 776 no_subtype TRUE canonical NA NA 2974 None 22 5 0 FALSE 0 0 NA A coding 1004 3012 88 3099 PB.5499.1 chr9 - 2664 1 genic_intron novelGene_1084 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 10 14 0 FALSE 0 0 NA A coding 101 303 1491 1793 PB.547.1 chr1 + 1543 8 fusion GSTM1,GSTM5 novel NA NA NA NA no_subtype FALSE canonical NA NA 620 None 5 4 0 FALSE 0 0 NA A coding 218 654 54 707 PB.8782.3 chr16 + 3085 4 genic_intron novelGene_769 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1437 None 2 23 3 FALSE 0 0 NA A coding 69 207 172 378 PB.6381.1 chr11 - 3609 24 full-splice_match GANAB ENST00000356638.7 3608 24 -10 9 no_subtype FALSE canonical NA NA 65 None 154 6 0 FALSE 0 0 NA C coding 944 2832 28 2859 PB.10748.1 chr22 + 3319 1 novel_in_catalog LGALS1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4855.1 chr8 - 1669 9 full-splice_match CLU ENST00000316403.14 3080 9 329 1082 no_subtype FALSE canonical NA NA 48 None 124 1 0 FALSE 0 0 NA C coding 449 1347 78 1424 PB.6381.5 chr11 - 3179 19 novel_not_in_catalog GANAB novel NA NA NA NA no_subtype TRUE canonical NA NA 31 None 3 7 0 TRUE 0 0 NA C coding 703 2109 89 2197 PB.4855.2 chr8 - 1731 9 full-splice_match CLU ENST00000405140.7 2098 9 177 190 no_subtype FALSE canonical NA NA 109 None 8 1 0 FALSE 0 0 NA C coding 449 1347 139 1485 PB.3815.4 chr6 - 1574 1 novel_in_catalog GPANK1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3815.1 chr6 - 1515 4 novel_not_in_catalog GPANK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 24 None 10 2 0 FALSE 0 0 NA B coding 356 1068 266 1333 PB.5692.1 chr10 - 3342 31 novel_not_in_catalog ITGA8 novel NA NA NA NA no_subtype FALSE canonical NA NA 360 None 14 4 0 TRUE 0 0 NA A coding 1063 3189 152 3340 PB.3815.3 chr6 - 1770 4 novel_not_in_catalog GPANK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 280 None 2 7 1 FALSE 0 0 NA B coding 356 1068 522 1589 PB.794.1 chr1 - 6564 4 novel_not_in_catalog CD48 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 156 None 4 48 2 TRUE 0 0 NA C coding 137 411 171 581 PB.6200.1 chr11 + 1484 4 full-splice_match ADM ENST00000278175.9 1885 4 397 4 no_subtype FALSE canonical NA NA 422 None 24 5 0 FALSE 0 0 NA A coding 185 555 175 729 PB.7864.1 chr14 - 2574 12 novel_not_in_catalog FBLN5 novel NA NA NA NA no_subtype FALSE canonical NA NA 437 None 3 5 0 TRUE 0 0 NA A coding 448 1344 421 1764 PB.7362.7 chr12 - 1277 4 novel_not_in_catalog UBC novel NA NA NA NA no_subtype TRUE non_canonical NA NA 64 None 3 0 0 TRUE 0 0 NA B coding 381 1143 68 1210 PB.946.10 chr1 + 2638 29 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2591 None 10 4 0 TRUE 0 0 NA B coding 850 2550 87 2636 PB.10434.18 chr20 - 2817 8 incomplete-splice_match ZNFX1 ENST00000371754.8 5235 15 301 2117 internal_fragment FALSE canonical NA NA 105 None 169 0 0 FALSE 0 0 NA C coding 888 2664 154 2817 PB.4718.15 chr7 + 3251 1 novel_in_catalog SSBP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA A coding 2 6 350 355 PB.1422.1 chr2 + 3159 1 novel_in_catalog ACTG2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 11 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.779.1 chr1 - 4366 23 novel_not_in_catalog IGSF9 novel NA NA NA NA no_subtype FALSE canonical NA NA 350 None 2 7 1 TRUE 0 0 NA A coding 852 2556 1510 4065 PB.10434.13 chr20 - 3775 14 novel_in_catalog ZNFX1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 36 None 2 2 0 FALSE 0 0 NA C coding 1230 3690 85 3774 PB.10434.10 chr20 - 5784 19 novel_not_in_catalog ZNFX1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 37 None 2 20 2 TRUE 0 0 NA C coding 902 2706 86 2791 PB.1464.1 chr2 - 1616 1 incomplete-splice_match RNF103 ENST00000237455.4 3477 4 1853 9 no_subtype FALSE canonical NA NA NA None 3 2 0 FALSE 0 0 NA C coding 374 1122 51 1172 PB.8532.1 chr16 + 2110 8 full-splice_match NFATC2IP ENST00000320805.8 4569 8 61 2398 no_subtype FALSE canonical NA NA 1115 None 2 2 0 FALSE 0 0 NA A coding 419 1257 15 1271 PB.10434.17 chr20 - 7299 15 novel_not_in_catalog ZNFX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 24 None 4 10 1 FALSE 0 0 NA C coding 1918 5754 186 5939 PB.10434.15 chr20 - 3382 1 incomplete-splice_match ZNFX1 ENST00000371752.5 7212 14 3812 19 no_subtype FALSE canonical NA NA NA None 16 14 0 FALSE 0 0 NA C coding 660 1980 49 2028 PB.11182.1 chrX - 1029 1 antisense novelGene_FMR1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 1 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8463.1 chr16 - 3388 3 genic_intron novelGene_156 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 190 None 4 25 1 FALSE 0 0 NA A coding 110 330 2200 2529 PB.2073.1 chr3 + 4066 17 novel_not_in_catalog STT3B novel NA NA NA NA no_subtype FALSE canonical NA NA 2431 None 12 9 0 TRUE 0 0 NA C coding 826 2478 32 2509 PB.6778.2 chr12 + 2863 17 novel_not_in_catalog PLEKHG6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2501 None 2 5 2 TRUE 0 0 NA B coding 705 2115 394 2508 PB.1963.1 chr2 - 3030 1 antisense novelGene_FARP2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4664.1 chr7 - 1702 1 full-splice_match RP11-138A9.1 ENST00000605249.1 1998 1 285 11 no_subtype FALSE canonical NA NA NA None 4 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6780.2 chr12 - 3803 12 full-splice_match SCNN1A ENST00000360168.7 3481 12 -332 10 no_subtype TRUE canonical NA NA 1189 None 40 7 0 FALSE 0 0 NA C coding 728 2184 597 2780 PB.2237.3 chr3 - 3518 17 full-splice_match BAP1 ENST00000296288.9 3434 17 -72 -12 no_subtype TRUE canonical NA NA 145 None 2 11 1 FALSE 0 0 NA C coding 711 2133 109 2241 PB.8381.2 chr16 + 1551 9 full-splice_match MLST8 ENST00000564088.5 1861 9 306 4 no_subtype FALSE canonical NA NA 917 None 7 10 0 FALSE 0 0 NA C coding 326 978 56 1033 PB.6780.6 chr12 - 3287 13 novel_in_catalog SCNN1A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 204 None 2 7 1 FALSE 0 0 NA C coding 669 2007 259 2265 PB.6780.7 chr12 - 3225 13 novel_not_in_catalog SCNN1A novel NA NA NA NA no_subtype FALSE canonical NA NA 144 None 4 3 0 FALSE 0 0 NA C coding 669 2007 199 2205 PB.6780.4 chr12 - 2906 13 full-splice_match SCNN1A ENST00000228916.6 3135 13 -7 236 no_subtype FALSE canonical NA NA 52 None 40 2 0 FALSE 0 0 NA C coding 669 2007 107 2113 PB.6780.5 chr12 - 3515 14 novel_not_in_catalog SCNN1A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 299 None 3 13 2 TRUE 0 0 NA C coding 714 2142 352 2493 PB.1187.3 chr2 + 3054 11 novel_not_in_catalog RRM2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2274 None 4 11 1 TRUE 0 0 NA C coding 389 1167 52 1218 PB.6780.8 chr12 - 3160 5 novel_not_in_catalog SCNN1A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 52 None 2 19 0 TRUE 0 0 NA C coding 292 876 107 982 PB.1187.1 chr2 + 1619 10 full-splice_match RRM2 ENST00000304567.9 3271 10 30 1622 no_subtype FALSE canonical NA NA 1056 None 12 2 0 FALSE 0 0 NA C coding 389 1167 40 1206 PB.6135.1 chr11 + 1470 3 full-splice_match TSSC4 ENST00000333256.10 1686 3 225 -9 no_subtype FALSE canonical NA NA 195 None 17 2 0 FALSE 0 0 NA A coding 329 987 219 1205 PB.5168.1 chr8 + 1661 8 full-splice_match MAF1 ENST00000322428.9 1677 8 14 2 no_subtype FALSE canonical NA NA 1139 None 173 5 1 FALSE 0 0 NA A coding 256 768 391 1158 PB.10857.1 chrX + 3546 11 novel_not_in_catalog STS novel NA NA NA NA no_subtype FALSE canonical NA NA 1502 None 7 8 0 TRUE 0 0 NA A coding 578 1734 140 1873 PB.1902.2 chr2 + 1672 2 genic_intron novelGene_1407 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 25 None 12 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8200.3 chr15 + 3562 8 novel_not_in_catalog PML novel NA NA NA NA no_subtype FALSE canonical NA NA 2414 None 2 9 1 TRUE 0 0 NA C coding 560 1680 24 1703 PB.8200.2 chr15 + 2751 8 novel_not_in_catalog PML novel NA NA NA NA no_subtype FALSE canonical NA NA 1603 None 9 3 1 TRUE 0 0 NA C coding 566 1698 6 1703 PB.8200.5 chr15 + 4378 9 full-splice_match PML ENST00000268058.7 4508 9 124 6 no_subtype FALSE canonical NA NA 1833 None 18 6 0 FALSE 0 0 NA C coding 860 2580 39 2618 PB.8200.4 chr15 + 4286 8 full-splice_match PML ENST00000565898.5 5393 8 61 1046 no_subtype FALSE canonical NA NA 1740 None 2 7 0 FALSE 0 0 NA C coding 834 2502 24 2525 PB.2546.1 chr3 - 2739 6 full-splice_match SLC33A1 ENST00000392845.7 9217 6 -81 6559 no_subtype FALSE canonical NA NA 1237 None 30 5 0 FALSE 0 0 NA A coding 549 1647 463 2109 PB.1905.12 chr2 - 6701 42 novel_in_catalog TRIP12 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 113 None 2 6 0 FALSE 0 0 NA B coding 2067 6201 163 6363 PB.1905.13 chr2 - 6546 41 novel_not_in_catalog TRIP12 novel NA NA NA NA no_subtype FALSE canonical NA NA 81 None 16 3 1 FALSE 0 0 NA B coding 2026 6078 131 6208 PB.5516.1 chr9 - 2893 4 incomplete-splice_match ANGPTL2 ENST00000373425.7 3707 5 811 3 5prime_fragment FALSE canonical NA NA 624 None 2 10 0 FALSE 0 0 NA C coding 364 1092 195 1286 PB.5526.3 chr9 - 2766 11 full-splice_match SH2D3C ENST00000373277.8 2750 11 -18 2 no_subtype TRUE canonical NA NA 271 None 2 3 0 FALSE 0 0 NA C coding 703 2109 228 2336 PB.1905.14 chr2 - 3481 22 novel_in_catalog TRIP12 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 81 None 2 1 0 FALSE 0 0 NA B coding 1117 3351 131 3481 PB.6887.2 chr12 + 3038 2 genic_intron novelGene_280 novel NA NA NA NA no_subtype FALSE canonical NA NA 107 None 4 19 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.11052.2 chrX - 2611 8 novel_not_in_catalog TAF9B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 72 None 3 25 1 TRUE 0 0 NA C coding 251 753 22 774 PB.11052.1 chrX - 2633 7 full-splice_match TAF9B ENST00000341864.5 2713 7 74 6 no_subtype FALSE canonical NA NA 72 None 22 24 0 FALSE 0 0 NA C coding 251 753 22 774 PB.1367.1 chr2 + 2730 2 full-splice_match B3GNT2 ENST00000301998.4 2763 2 28 5 no_subtype FALSE canonical NA NA 215 None 33 10 0 FALSE 0 0 NA A coding 397 1191 225 1415 PB.9042.1 chr17 - 6753 3 genic_intron novelGene_304 novel NA NA NA NA no_subtype TRUE canonical NA NA 242 None 12 28 1 FALSE 0 0 NA B coding 179 537 5475 6011 PB.3787.1 chr6 - 6297 1 genic_intron novelGene_243 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 57 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.670.10 chr1 - 5774 1 novel_in_catalog CDC42SE1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 11 26 0 FALSE 0 0 NA C coding 100 300 2866 3165 PB.984.1 chr1 + 5873 13 novel_not_in_catalog ATP2B4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2971 None 2 27 0 TRUE 0 0 NA B coding 631 1893 196 2088 PB.9831.3 chr19 - 1729 9 novel_not_in_catalog ADGRE2 novel NA NA NA NA no_subtype TRUE canonical NA NA 119 None 2 11 1 FALSE 0 0 NA A coding 178 534 272 805 PB.984.6 chr1 - 3538 2 antisense novelGene_ATP2B4_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3267 None 2 25 1 FALSE 0 0 NA A coding 214 642 2722 3363 PB.10756.1 chr22 - 2833 11 novel_in_catalog CSNK1E novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 293 None 2 16 0 FALSE 0 0 NA A coding 416 1248 306 1553 PB.4193.1 chr6 - 1843 11 full-splice_match KATNA1 ENST00000367411.6 1984 11 127 14 no_subtype FALSE canonical NA NA 209 None 7 4 0 FALSE 0 0 NA A coding 491 1473 223 1695 PB.7044.1 chr12 - 1801 8 full-splice_match PTGES3 ENST00000262033.10 1920 8 110 9 no_subtype FALSE canonical NA NA 193 None 4 8 0 FALSE 0 0 NA C coding 160 480 192 671 PB.4763.1 chr7 - 2894 8 incomplete-splice_match KMT2C ENST00000355193.6 16858 59 13358 606 5prime_fragment FALSE canonical NA NA 755 None 6 7 0 FALSE 0 0 NA B coding 452 1356 239 1594 PB.1859.12 chr2 + 2916 6 novel_in_catalog SLC11A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1919 None 4 20 0 FALSE 0 0 NA C coding 111 333 82 414 PB.3887.1 chr6 + 3454 14 full-splice_match RAB44 ENST00000612677.4 4233 14 -5 784 no_subtype FALSE canonical NA NA 3057 None 7 6 0 FALSE 0 0 NA A coding 1021 3063 83 3145 PB.6788.1 chr12 - 1540 9 full-splice_match MLF2 ENST00000203630.9 1969 9 414 15 no_subtype FALSE canonical NA NA 203 None 141 6 0 FALSE 0 0 NA A coding 248 744 232 975 PB.9851.2 chr19 - 4122 17 full-splice_match CHERP ENST00000198939.6 4084 17 -41 3 no_subtype FALSE canonical NA NA 103 None 7 12 0 FALSE 0 0 NA C coding 927 2781 79 2859 PB.9851.1 chr19 - 4045 17 full-splice_match CHERP ENST00000546361.6 4173 17 116 12 no_subtype FALSE canonical NA NA 61 None 24 15 0 FALSE 0 0 NA C coding 916 2748 37 2784 PB.3662.1 chr5 + 4044 31 full-splice_match CDHR2 ENST00000506348.1 4005 31 30 -69 no_subtype FALSE canonical NA NA 3809 None 17 2 0 FALSE 0 0 NA A coding 1310 3930 18 3947 PB.8548.1 chr16 + 1499 1 novel_in_catalog INO80E novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4010.1 chr6 - 5737 30 novel_not_in_catalog IBTK novel NA NA NA NA no_subtype TRUE non_canonical NA NA 164 None 5 5 1 TRUE 0 0 NA B coding 1353 4059 522 4580 PB.4010.2 chr6 - 2632 12 incomplete-splice_match IBTK ENST00000369751.2 4437 24 31 1774 internal_fragment FALSE canonical NA NA 162 None 6 4 0 FALSE 0 0 NA B coding 704 2112 520 2631 PB.4471.1 chr7 + 1288 1 antisense novelGene_YWHAG_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8528.1 chr16 + 3495 17 incomplete-splice_match ATXN2L ENST00000336783.8 4367 22 868 4 internal_fragment FALSE canonical NA NA 2194 None 5 3 0 FALSE 0 0 NA B coding 829 2487 38 2524 PB.8528.2 chr16 + 2891 18 incomplete-splice_match ATXN2L ENST00000340394.12 3807 23 912 4 internal_fragment FALSE canonical NA NA 2385 None 3 6 1 FALSE 0 0 NA B coding 798 2394 39 2432 PB.8871.3 chr17 - 4483 22 novel_in_catalog CAMTA2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 70 None 11 3 0 FALSE 0 0 NA A coding 1195 3585 135 3719 PB.966.2 chr1 + 2961 8 novel_not_in_catalog PPP1R12B novel NA NA NA NA no_subtype FALSE canonical NA NA 988 None 2 11 0 TRUE 0 0 NA B coding 185 555 518 1072 PB.8528.6 chr16 + 2925 10 full-splice_match SH2B1 ENST00000359285.9 3033 10 101 7 no_subtype FALSE canonical NA NA 2173 None 4 3 0 FALSE 0 0 NA C coding 683 2049 124 2172 PB.8528.7 chr16 + 2876 10 novel_not_in_catalog SH2B1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2118 None 46 3 1 TRUE 0 0 NA C coding 670 2010 125 2134 PB.4491.1 chr7 - 4348 28 full-splice_match ABCB1 ENST00000622132.4 4778 28 192 238 no_subtype FALSE canonical NA NA 127 None 23 5 0 FALSE 0 0 NA A coding 1280 3840 134 3973 PB.8395.1 chr16 + 2986 9 novel_not_in_catalog ZNF213 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2842 None 4 21 0 TRUE 0 0 NA A coding 459 1377 370 1746 PB.2101.1 chr3 + 4245 18 full-splice_match OXSR1 ENST00000311806.7 4553 18 303 5 no_subtype FALSE canonical NA NA 1578 None 11 9 0 FALSE 0 0 NA A coding 527 1581 70 1650 PB.768.2 chr1 + 2911 6 novel_not_in_catalog CD1C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1594 None 2 13 1 TRUE 0 0 NA C coding 347 1041 573 1613 PB.9872.1 chr19 + 612 5 full-splice_match RPL18A ENST00000222247.9 665 5 47 6 no_subtype TRUE canonical NA NA 472 None 15 2 0 FALSE 0 0 NA A coding 176 528 35 562 PB.5001.1 chr8 + 3601 25 full-splice_match WWP1 ENST00000517970.5 4686 25 -24 1109 no_subtype FALSE canonical NA NA 3000 None 4 2 0 FALSE 0 0 NA A coding 922 2766 332 3097 PB.1952.1 chr2 - 1519 10 full-splice_match NDUFA10 ENST00000252711.6 4915 10 21 3375 no_subtype FALSE canonical NA NA 155 None 43 3 0 FALSE 0 0 NA A coding 355 1065 81 1145 PB.10045.1 chr19 + 3177 9 novel_not_in_catalog PVR novel NA NA NA NA no_subtype FALSE canonical NA NA 2589 None 2 23 1 TRUE 0 0 NA A coding 405 1215 214 1428 PB.6321.1 chr11 - 3953 17 novel_not_in_catalog FNBP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 224 None 6 8 1 FALSE 0 0 NA B coding 924 2772 284 3055 PB.6501.1 chr11 + 3019 1 incomplete-splice_match CCND1 ENST00000227507.2 4307 5 1286 3 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6321.3 chr11 - 3202 15 novel_not_in_catalog FNBP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 221 None 3 7 1 FALSE 0 0 NA B coding 530 1590 281 1870 PB.6321.2 chr11 - 4166 18 novel_not_in_catalog FNBP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 335 None 2 13 2 FALSE 0 0 NA B coding 616 1848 110 1957 PB.6321.4 chr11 - 2822 15 novel_not_in_catalog FNBP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 268 None 5 6 1 FALSE 0 0 NA B coding 926 2778 43 2820 PB.6321.7 chr11 - 2517 11 novel_not_in_catalog FNBP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 226 None 2 3 1 FALSE 0 0 NA B coding 625 1875 1 1875 PB.5439.1 chr9 + 1478 4 full-splice_match DNAJC25 ENST00000313525.3 2268 4 -26 816 no_subtype FALSE canonical NA NA 1042 None 2 3 0 FALSE 0 0 NA C coding 360 1080 83 1162 PB.7346.4 chr12 + 2916 14 novel_in_catalog HIP1R novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1271 None 2 13 0 FALSE 0 0 NA C coding 351 1053 525 1577 PB.704.9 chr1 + 1828 2 full-splice_match IL6R ENST00000502679.1 588 2 362 -1602 no_subtype FALSE canonical NA NA 111 None 2 3 0 FALSE 0 0 NA C coding 65 195 161 355 PB.704.5 chr1 + 2637 10 novel_not_in_catalog IL6R novel NA NA NA NA no_subtype FALSE canonical NA NA 920 None 23 3 0 TRUE 0 0 NA C coding 277 831 334 1164 PB.704.4 chr1 + 2888 11 novel_not_in_catalog IL6R novel NA NA NA NA no_subtype FALSE canonical NA NA 1171 None 2 8 0 TRUE 0 0 NA C coding 423 1269 147 1415 PB.5033.4 chr8 + 2771 9 incomplete-splice_match MTDH ENST00000336273.7 6177 12 948 2458 internal_fragment FALSE canonical NA NA 1058 None 3 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9859.1 chr19 + 5642 29 novel_not_in_catalog MYO9B novel NA NA NA NA no_subtype FALSE canonical NA NA 4256 None 2 7 1 FALSE 0 0 NA A coding 787 2361 124 2484 PB.5033.2 chr8 + 1548 9 incomplete-splice_match MTDH ENST00000336273.7 6177 12 105 4524 3prime_fragment FALSE canonical NA NA 1495 None 31 0 0 FALSE 0 0 NA C coding 441 1323 224 1546 PB.5033.3 chr8 + 3609 12 full-splice_match MTDH ENST00000336273.7 6177 12 104 2464 no_subtype FALSE canonical NA NA 1902 None 4 6 0 FALSE 0 0 NA C coding 582 1746 225 1970 PB.3245.1 chr5 - 2746 1 antisense novelGene_PARP8_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4074.1 chr6 - 2636 10 full-splice_match SESN1 ENST00000356644.7 2676 10 35 5 no_subtype FALSE canonical NA NA 162 None 12 6 0 FALSE 0 0 NA C coding 492 1476 61 1536 PB.5152.2 chr8 - 980 8 full-splice_match EEF1D ENST00000529272.5 1311 8 329 2 no_subtype FALSE canonical NA NA 68 None 16 2 0 FALSE 0 0 NA C coding 281 843 73 915 PB.141.4 chr1 - 2893 4 novel_not_in_catalog CNR2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 117 None 2 8 0 TRUE 0 0 NA C coding 360 1080 163 1242 PB.1601.1 chr2 + 2642 2 novel_not_in_catalog MGAT5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 534 None 2 19 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.10940.1 chrX + 3215 21 full-splice_match USP11 ENST00000218348.7 3338 21 159 -36 no_subtype TRUE canonical NA NA 2644 None 119 5 0 FALSE 0 0 NA C coding 920 2760 20 2779 PB.8879.2 chr17 - 2913 2 novel_not_in_catalog DERL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2753 None 3 20 1 TRUE 0 0 NA B coding 105 315 20 334 PB.8879.1 chr17 - 1127 8 novel_not_in_catalog DERL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 109 None 14 2 0 TRUE 0 0 NA B coding 239 717 20 736 PB.5190.1 chr8 - 1878 1 novel_in_catalog ZNF250 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3696.1 chr5 - 1742 1 incomplete-splice_match TBC1D9B ENST00000519746.5 2755 8 1005 9 no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA B coding 99 297 70 366 PB.11084.1 chrX + 2108 4 full-splice_match ARMCX1 ENST00000372829.7 2141 4 23 10 no_subtype FALSE canonical NA NA 226 None 4 2 0 FALSE 0 0 NA A coding 453 1359 349 1707 PB.5382.1 chr9 - 1487 1 antisense novelGene_ZNF169_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8054.1 chr15 + 1759 1 incomplete-splice_match CTDSPL2 ENST00000260327.8 6828 13 5060 10 no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3092.2 chr4 - 2799 7 full-splice_match TMEM154 ENST00000304385.7 10698 7 211 7688 no_subtype FALSE canonical NA NA 85 None 4 7 0 FALSE 0 0 NA C coding 183 549 22 570 PB.4038.2 chr6 + 1850 17 novel_not_in_catalog UFL1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1722 None 2 0 0 TRUE 0 0 NA B coding 605 1815 36 1850 PB.4038.1 chr6 + 2847 21 novel_not_in_catalog UFL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2197 None 48 2 0 TRUE 0 0 NA B coding 794 2382 32 2413 PB.6871.1 chr12 - 1142 1 incomplete-splice_match KRAS ENST00000311936.7 5765 5 4161 463 no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4452.1 chr7 + 3708 3 genic WBSCR22 novel NA NA NA NA no_subtype FALSE canonical NA NA 3428 None 2 28 2 TRUE 0 0 NA C coding 101 303 1018 1320 PB.1391.2 chr2 + 3152 8 novel_in_catalog PLEK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2686 None 2 10 0 FALSE 0 0 NA C coding 229 687 71 757 PB.4208.1 chr6 + 5733 3 novel_not_in_catalog SCAF8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3042 None 2 54 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.10774.1 chr22 + 1413 3 full-splice_match ATF4 ENST00000396680.2 1419 3 0 6 no_subtype FALSE canonical NA NA 506 None 35 2 0 FALSE 0 0 NA A coding 351 1053 281 1333 PB.2638.1 chr3 + 3401 14 novel_in_catalog MAP3K13 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2947 None 3 2 0 FALSE 0 0 NA C coding 966 2898 149 3046 PB.8897.7 chr17 + 2743 1 full-splice_match KCTD11 ENST00000333751.4 2783 1 34 6 no_subtype FALSE canonical NA NA NA None 38 14 0 FALSE 0 0 NA A coding 228 684 760 1443 PB.8897.6 chr17 + 3104 20 novel_not_in_catalog ACAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2926 None 2 9 1 TRUE 0 0 NA B coding 408 1224 1006 2229 PB.8897.5 chr17 + 3049 21 novel_not_in_catalog ACAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2867 None 6 5 0 TRUE 0 0 NA B coding 645 1935 1031 2965 PB.8897.4 chr17 + 2581 22 novel_not_in_catalog ACAP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2404 None 2 5 0 TRUE 0 0 NA B coding 503 1509 199 1707 PB.8897.3 chr17 + 2496 23 novel_not_in_catalog ACAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2316 None 37 1 0 TRUE 0 0 NA B coding 740 2220 195 2414 PB.2293.2 chr3 - 2871 13 incomplete-splice_match TMF1 ENST00000398559.6 6849 17 30 3948 internal_fragment FALSE canonical NA NA 329 None 7 2 0 FALSE 0 0 NA B coding 894 2682 188 2869 PB.8897.1 chr17 + 2705 21 novel_in_catalog ACAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2523 None 14 2 0 FALSE 0 0 NA B coding 552 1656 966 2621 PB.10126.1 chr19 + 3131 26 novel_not_in_catalog MYH14 novel NA NA NA NA no_subtype TRUE canonical NA NA 3062 None 2 3 1 TRUE 0 0 NA B coding 1042 3126 6 3131 PB.4089.1 chr6 - 3776 1 novel_in_catalog FYN novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 29 0 FALSE 0 0 NA B coding 157 471 2855 3325 PB.2490.3 chr3 + 2720 3 full-splice_match NCK1 ENST00000469404.1 2403 3 47 -364 no_subtype FALSE canonical NA NA 791 None 9 20 0 FALSE 0 0 NA C coding 313 939 45 983 PB.6127.1 chr11 - 1340 6 full-splice_match TOLLIP ENST00000317204.10 3617 6 21 2256 no_subtype FALSE canonical NA NA 136 None 2 4 0 FALSE 0 0 NA A coding 274 822 104 925 PB.1936.1 chr2 + 3882 2 genic COPS8 novel NA NA NA NA no_subtype FALSE canonical NA NA 3518 None 3 27 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.10730.30 chr22 - 6416 38 novel_in_catalog MYH9 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 30 None 2 5 0 FALSE 0 0 NA C coding 1643 4929 464 5392 PB.10730.32 chr22 - 1617 3 novel_not_in_catalog MYH9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1310 None 2 5 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.7595.1 chr14 - 1691 7 full-splice_match TMEM55B ENST00000250489.8 1961 7 128 142 no_subtype FALSE canonical NA NA 301 None 8 3 0 FALSE 0 0 NA C coding 277 831 160 990 PB.9592.1 chr18 - 2776 1 genic_intron novelGene_599 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7595.2 chr14 - 1661 7 full-splice_match TMEM55B ENST00000398020.6 1696 7 31 4 no_subtype FALSE canonical NA NA 272 None 17 3 1 FALSE 0 0 NA C coding 284 852 110 961 PB.411.4 chr1 - 1419 1 novel_in_catalog Y_RNA novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10533.6 chr21 + 1875 8 novel_not_in_catalog IL10RB novel NA NA NA NA no_subtype FALSE canonical NA NA 1695 None 70 7 1 TRUE 0 0 NA C coding 325 975 57 1031 PB.411.7 chr1 - 4037 19 incomplete-splice_match JAK1 ENST00000342505.4 5047 25 1007 3 5prime_fragment FALSE canonical NA NA 232 None 6 11 0 FALSE 0 0 NA B coding 865 2595 110 2704 PB.1719.1 chr2 + 3231 20 full-splice_match AGPS ENST00000264167.8 7764 20 130 4403 no_subtype TRUE canonical NA NA 1871 None 9 16 0 FALSE 0 0 NA C coding 658 1974 17 1990 PB.2147.1 chr3 + 1537 5 novel_not_in_catalog CCR3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1459 None 10 2 1 TRUE 0 0 NA A coding 355 1065 114 1178 PB.411.3 chr1 - 3667 18 novel_not_in_catalog JAK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 51 None 38 10 0 FALSE 0 0 NA B coding 693 2079 259 2337 PB.4565.1 chr7 - 3198 3 novel_not_in_catalog RP11-395B7.2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 124 None 6 25 0 FALSE 0 0 NA A coding 161 483 1625 2107 PB.6654.1 chr11 - 3229 6 novel_not_in_catalog NXPE4 novel NA NA NA NA no_subtype FALSE canonical NA NA 78 None 4 16 0 FALSE 0 0 NA C coding 394 1182 89 1270 PB.6654.2 chr11 - 2086 6 full-splice_match NXPE4 ENST00000375478.3 1822 6 71 -335 no_subtype FALSE canonical NA NA 100 None 6 1 0 FALSE 0 0 NA C coding 544 1632 111 1742 PB.6654.3 chr11 - 4168 5 novel_in_catalog NXPE4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 98 None 5 16 0 FALSE 0 0 NA C coding 373 1119 109 1227 PB.2314.1 chr3 - 3555 3 genic PPATP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2033 None 9 16 1 FALSE 0 0 NA A coding 156 468 1205 1672 PB.2816.2 chr4 - 3441 6 full-splice_match RBM47 ENST00000381793.6 4816 6 190 1185 no_subtype FALSE canonical NA NA 53 None 11 10 0 FALSE 0 0 NA C coding 593 1779 208 1986 PB.2642.3 chr3 + 3106 17 novel_not_in_catalog SENP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1797 None 3 7 1 FALSE 0 0 NA C coding 509 1527 331 1857 PB.10229.5 chr20 + 3806 9 novel_not_in_catalog SIRPA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3091 None 2 18 0 TRUE 0 0 NA C coding 508 1524 42 1565 PB.6189.1 chr11 + 3818 2 genic TMEM9B-AS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 921 None 3 21 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.1677.1 chr2 + 3118 1 incomplete-splice_match CERS6 ENST00000392687.4 6851 11 3723 11 no_subtype FALSE canonical NA NA NA None 4 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10533.5 chr21 + 1986 9 novel_not_in_catalog IL10RB novel NA NA NA NA no_subtype FALSE canonical NA NA 1807 None 5 11 1 TRUE 0 0 NA C coding 356 1068 76 1143 PB.11104.1 chrX + 2604 5 novel_not_in_catalog NXT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 415 None 2 9 0 FALSE 0 0 NA C coding 142 426 169 594 PB.566.2 chr1 + 2593 2 novel_not_in_catalog ATP5F1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2154 None 3 15 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.2816.4 chr4 - 3615 1 novel_in_catalog RBM47 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.423.5 chr1 - 1344 8 full-splice_match SERBP1 ENST00000370994.8 6676 8 13 5319 no_subtype FALSE canonical NA NA 415 None 35 0 0 FALSE 0 0 NA C coding 387 1161 103 1263 PB.3251.1 chr5 - 2569 2 novel_not_in_catalog ARL15 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 860 None 3 19 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.423.1 chr1 - 1361 8 full-splice_match SERBP1 ENST00000361219.10 2103 8 -3 745 no_subtype FALSE canonical NA NA 415 None 80 0 0 FALSE 0 0 NA C coding 393 1179 103 1281 PB.9013.4 chr17 - 1500 6 novel_in_catalog MYO18A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 50 None 2 3 0 FALSE 0 0 NA B coding 260 780 45 824 PB.95.1 chr1 - 3089 16 novel_not_in_catalog ALDH4A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 65 None 9 12 1 TRUE 0 0 NA A coding 563 1689 4 1692 PB.7959.167 chr14 - 1555 12 fusion IGHV3-62,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 118 None 2 17 5 TRUE 0 0 NA B coding 196 588 833 1420 PB.4113.2 chr6 + 3068 6 novel_in_catalog NCOA7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 599 None 2 16 0 FALSE 0 0 NA C coding 209 627 106 732 PB.9013.1 chr17 - 6418 41 novel_not_in_catalog MYO18A novel NA NA NA NA no_subtype FALSE canonical NA NA 47 None 4 9 1 TRUE 0 0 NA B coding 1708 5124 42 5165 PB.6222.1 chr11 + 896 5 full-splice_match C11orf58 ENST00000228136.8 2049 5 270 883 no_subtype FALSE canonical NA NA 426 None 51 0 0 FALSE 0 0 NA A coding 183 549 109 657 PB.4113.1 chr6 + 5329 16 novel_not_in_catalog NCOA7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2857 None 2 18 0 FALSE 0 0 NA C coding 879 2637 354 2990 PB.10635.3 chr22 - 3577 17 novel_in_catalog ARVCF novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 115 None 2 16 1 FALSE 0 0 NA B coding 893 2679 95 2773 PB.10635.2 chr22 - 3433 16 novel_in_catalog ARVCF novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 94 None 4 6 0 FALSE 0 0 NA B coding 866 2598 74 2671 PB.10635.1 chr22 - 1936 19 novel_not_in_catalog TXNRD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 118 None 2 2 0 FALSE 0 0 NA A coding 519 1557 25 1581 PB.10825.1 chr22 + 3300 1 novel_in_catalog MIRLET7BHG novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 16 0 FALSE 0 0 NA A coding 147 441 175 615 PB.7959.161 chr14 - 1529 12 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 82 None 2 14 6 TRUE 0 0 NA B coding 196 588 806 1393 PB.6754.2 chr12 + 3144 1 genic_intron novelGene_11 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.162 chr14 - 1485 10 fusion IGHV4-34,IGHG1,IGHV3-21,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 81 None 2 8 3 TRUE 0 0 NA B coding 196 588 762 1349 PB.1681.1 chr2 - 2927 15 novel_not_in_catalog FASTKD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 172 None 14 2 1 FALSE 0 0 NA B coding 675 2025 835 2859 PB.2283.1 chr3 + 3940 1 antisense novelGene_RP11-320P11.1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1859.19 chr2 + 1602 1 incomplete-splice_match CTDSP1 ENST00000273062.6 2638 7 1031 6 no_subtype FALSE canonical NA NA NA None 3 12 0 FALSE 0 0 NA B coding 146 438 375 812 PB.11024.1 chrX + 6346 38 full-splice_match TAF1 ENST00000276072.7 5692 38 -1 -653 no_subtype FALSE canonical NA NA 5470 None 12 2 0 FALSE 0 0 NA C coding 1893 5679 12 5690 PB.1385.1 chr2 + 2692 9 full-splice_match ACTR2 ENST00000260641.9 3861 9 86 1083 no_subtype FALSE canonical NA NA 1085 None 21 9 0 FALSE 0 0 NA C coding 394 1182 72 1253 PB.1006.1 chr1 + 3230 24 novel_not_in_catalog IKBKE novel NA NA NA NA no_subtype FALSE canonical NA NA 2462 None 28 3 0 TRUE 0 0 NA B coding 716 2148 346 2493 PB.1016.4 chr1 + 3610 20 novel_not_in_catalog CR2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3196 None 6 6 2 TRUE 0 0 NA C coding 1028 3084 92 3175 PB.6521.2 chr11 + 1935 8 novel_in_catalog PAAF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 745 None 2 10 0 FALSE 0 0 NA C coding 283 849 19 867 PB.10387.1 chr20 + 3706 6 full-splice_match SRSF6 ENST00000244020.4 4325 6 -32 651 no_subtype FALSE canonical NA NA 812 None 27 23 0 FALSE 0 0 NA C coding 344 1032 139 1170 PB.10387.2 chr20 + 3056 5 novel_in_catalog SRSF6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2074 None 4 11 0 FALSE 0 0 NA C coding 120 360 140 499 PB.6443.2 chr11 - 3212 2 full-splice_match AP5B1 ENST00000532090.2 4811 2 -132 1731 no_subtype FALSE canonical NA NA 493 None 2 13 0 FALSE 0 0 NA C coding 878 2634 344 2977 PB.547.2 chr1 + 1522 8 full-splice_match GSTM5 ENST00000256593.7 1555 8 26 7 no_subtype FALSE canonical NA NA 599 None 47 3 0 FALSE 0 0 NA A coding 218 654 33 686 PB.6443.1 chr11 - 2841 2 novel_not_in_catalog AP5B1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1246 None 2 12 1 TRUE 0 0 NA C coding 223 669 257 925 PB.2209.2 chr3 - 1927 13 novel_not_in_catalog IFRD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 213 None 13 3 0 TRUE 0 0 NA A coding 442 1326 156 1481 PB.518.1 chr1 + 2858 1 antisense novelGene_BCAS2P2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.518.2 chr1 - 2782 1 genic_intron novelGene_914 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7226.6 chr12 - 3002 2 novel_in_catalog SART3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 326 None 2 12 0 FALSE 0 0 NA B coding 155 465 15 479 PB.10110.1 chr19 - 1590 8 full-splice_match IRF3 ENST00000377139.7 1613 8 18 5 no_subtype FALSE canonical NA NA 227 None 159 5 0 FALSE 0 0 NA A coding 427 1281 236 1516 PB.8935.2 chr17 + 2637 1 genic_intron novelGene_111 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4653.1 chr7 + 1609 2 genic_intron novelGene_1119 novel NA NA NA NA no_subtype FALSE canonical NA NA 406 None 2 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1463.2 chr2 + 2865 2 genic_intron novelGene_785 novel NA NA NA NA no_subtype FALSE canonical NA NA 831 None 7 27 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7589.1 chr14 - 1559 1 genic_intron novelGene_175 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1016.7 chr1 + 3033 1 novel_in_catalog CR2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA C coding 158 474 442 915 PB.5534.1 chr9 + 3389 10 full-splice_match SLC25A25 ENST00000373068.6 3431 10 41 1 no_subtype FALSE canonical NA NA 1405 None 22 16 0 FALSE 0 0 NA C coding 503 1509 79 1587 PB.8653.9 chr16 - 6138 38 incomplete-splice_match CNOT1 ENST00000317147.9 8471 49 1574 759 5prime_fragment FALSE canonical NA NA 102 None 4 2 0 FALSE 0 0 NA C coding 1894 5682 206 5887 PB.7566.1 chr13 - 1712 4 full-splice_match ARGLU1 ENST00000400198.7 3390 4 21 1657 no_subtype FALSE canonical NA NA 571 None 49 5 0 FALSE 0 0 NA C coding 273 819 225 1043 PB.5029.1 chr8 + 2522 15 novel_not_in_catalog PTDSS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1435 None 4 2 0 TRUE 0 0 NA B coding 473 1419 124 1542 PB.6093.1 chr10 + 2479 14 novel_not_in_catalog DPYSL4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1561 None 2 9 0 TRUE 0 0 NA B coding 512 1536 115 1650 PB.6309.1 chr11 + 1836 10 full-splice_match NR1H3 ENST00000441012.6 1637 10 46 -245 no_subtype TRUE canonical NA NA 1356 None 19 1 0 FALSE 0 0 NA A coding 447 1341 160 1500 PB.8653.6 chr16 - 7657 49 full-splice_match CNOT1 ENST00000317147.9 8471 49 60 754 no_subtype FALSE canonical NA NA 99 None 5 2 0 FALSE 0 0 NA C coding 2376 7128 274 7401 PB.7106.7 chr12 + 2952 1 novel_in_catalog MDM2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7194.1 chr12 - 2701 13 incomplete-splice_match GNPTAB ENST00000299314.11 5701 21 99 2901 internal_fragment FALSE canonical NA NA 281 None 19 2 0 FALSE 0 0 NA A coding 845 2535 165 2699 PB.3953.1 chr6 - 3016 4 novel_in_catalog CLIC5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 381 None 7 9 0 FALSE 0 0 NA A coding 137 411 319 729 PB.5345.21 chr9 - 1942 17 novel_not_in_catalog HNRNPK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 59 None 2 4 0 TRUE 0 0 NA C coding 446 1338 167 1504 PB.6214.1 chr11 - 4334 4 novel_not_in_catalog RRAS2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1028 None 2 38 1 TRUE 0 0 NA A coding 101 303 2901 3203 PB.6962.2 chr12 + 3083 12 novel_in_catalog SMARCD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1391 None 2 12 0 FALSE 0 0 NA C coding 474 1422 21 1442 PB.5345.22 chr9 - 2930 1 novel_in_catalog HNRNPK novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 22 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1534.4 chr2 + 2942 8 novel_in_catalog GCC2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2927 None 2 4 1 FALSE 0 0 NA B coding 961 2883 59 2941 PB.1534.5 chr2 + 6804 22 novel_not_in_catalog GCC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 4968 None 2 26 0 FALSE 0 0 NA B coding 1647 4941 96 5036 PB.3132.2 chr4 - 1673 6 full-splice_match FBXO8 ENST00000393674.6 2577 6 588 316 no_subtype FALSE canonical NA NA 267 None 2 3 0 FALSE 0 0 NA C coding 319 957 276 1232 PB.6093.2 chr10 + 2641 15 novel_not_in_catalog DPYSL4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1724 None 7 10 0 TRUE 0 0 NA B coding 572 1716 98 1813 PB.10692.2 chr22 + 1416 2 novel_not_in_catalog UQCR10 novel NA NA NA NA no_subtype FALSE canonical NA NA 157 None 2 6 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.3483.3 chr5 + 1523 1 genic_intron novelGene_1161 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10692.1 chr22 + 1446 3 novel_not_in_catalog UQCR10 novel NA NA NA NA no_subtype FALSE canonical NA NA 187 None 4 6 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.1695.1 chr2 - 2492 18 full-splice_match SLC25A12 ENST00000422440.6 2979 18 19 468 no_subtype FALSE canonical NA NA 31 None 10 0 0 FALSE 0 0 NA A coding 678 2034 20 2053 PB.5087.1 chr8 + 3060 23 novel_not_in_catalog MTBP novel NA NA NA NA no_subtype FALSE canonical NA NA 2725 None 2 7 0 TRUE 0 0 NA A coding 904 2712 50 2761 PB.10094.1 chr19 + 2944 8 novel_not_in_catalog SPHK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2519 None 23 6 1 TRUE 0 0 NA B coding 652 1956 384 2339 PB.3502.9 chr5 - 2925 21 novel_in_catalog BRD8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 36 None 2 1 0 FALSE 0 0 NA C coding 881 2643 18 2660 PB.7993.1 chr15 + 2959 1 genic EIF2AK4 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9194.1 chr17 + 5788 19 novel_not_in_catalog ITGB3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5707 None 2 14 2 TRUE 0 0 NA A coding 741 2223 446 2668 PB.3502.5 chr5 - 3078 21 novel_in_catalog BRD8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 27 None 7 1 0 FALSE 0 0 NA C coding 936 2808 9 2816 PB.3502.4 chr5 - 2877 20 full-splice_match BRD8 ENST00000411594.6 2967 20 41 49 no_subtype FALSE canonical NA NA 33 None 4 4 0 FALSE 0 0 NA C coding 866 2598 15 2612 PB.89.2 chr1 - 3216 24 novel_not_in_catalog ATP13A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 46 None 2 0 0 TRUE 0 0 NA B coding 971 2913 39 2951 PB.89.3 chr1 - 3851 30 novel_not_in_catalog ATP13A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 74 None 52 0 0 TRUE 0 0 NA B coding 1175 3525 65 3589 PB.3502.1 chr5 - 3131 22 full-splice_match BRD8 ENST00000230901.9 3198 22 2 65 no_subtype FALSE canonical NA NA 33 None 15 2 0 FALSE 0 0 NA C coding 951 2853 15 2867 PB.3502.3 chr5 - 2911 20 novel_in_catalog BRD8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 27 None 2 5 0 FALSE 0 0 NA C coding 863 2589 9 2597 PB.1225.5 chr2 + 1958 16 full-splice_match HADHB ENST00000317799.9 2044 16 80 6 no_subtype FALSE canonical NA NA 1413 None 124 5 0 FALSE 0 0 NA A coding 474 1422 25 1446 PB.11012.1 chrX + 5884 9 novel_not_in_catalog YIPF6 novel NA NA NA NA no_subtype TRUE canonical NA NA 5220 None 6 20 1 TRUE 0 0 NA A coding 236 708 15 722 PB.5812.4 chr10 + 2581 10 novel_not_in_catalog VPS26A novel NA NA NA NA no_subtype FALSE canonical NA NA 1994 None 109 11 1 TRUE 0 0 NA B coding 327 981 41 1021 PB.1016.1 chr1 + 3923 19 full-splice_match CR2 ENST00000367058.7 4063 19 125 15 no_subtype FALSE canonical NA NA 3184 None 75 4 0 FALSE 0 0 NA C coding 1033 3099 65 3163 PB.10249.2 chr20 - 2516 1 novel_in_catalog RNF24 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA C coding 103 309 1766 2074 PB.10994.1 chrX + 1967 6 full-splice_match APEX2 ENST00000374987.3 3245 6 -11 1289 no_subtype FALSE canonical NA NA 716 None 8 2 0 FALSE 0 0 NA A coding 518 1554 78 1631 PB.9349.1 chr17 - 1726 7 full-splice_match CD300LF ENST00000326165.10 1764 7 32 6 no_subtype FALSE canonical NA NA 123 None 9 9 0 FALSE 0 0 NA A coding 290 870 81 950 PB.2320.1 chr3 + 1486 1 novel_in_catalog C3orf38 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2294.1 chr3 - 1469 18 full-splice_match UBA3 ENST00000361055.8 2154 18 27 658 no_subtype FALSE canonical NA NA 48 None 24 0 0 FALSE 0 0 NA C coding 463 1389 29 1417 PB.890.3 chr1 - 3146 2 antisense novelGene_FAM20B_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1382 None 12 24 1 FALSE 0 0 NA B coding 102 306 2461 2766 PB.7959.87 chr14 - 1495 10 fusion IGHA1,IGHV3-38 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 124 None 2 12 4 TRUE 0 0 NA A coding 354 1062 388 1449 PB.10249.1 chr20 + 1832 7 full-splice_match PANK2 ENST00000610179.5 1807 7 -28 3 no_subtype FALSE canonical NA NA 1376 None 2 3 0 FALSE 0 0 NA A coding 447 1341 84 1424 PB.6996.1 chr12 + 2848 6 full-splice_match SP1 ENST00000327443.8 2846 6 -15 13 no_subtype FALSE canonical NA NA 2157 None 2 5 0 FALSE 0 0 NA A coding 785 2355 114 2468 PB.4544.1 chr7 + 1136 10 full-splice_match COPS6 ENST00000303904.7 1432 10 31 265 no_subtype FALSE canonical NA NA 849 None 11 4 0 FALSE 0 0 NA A coding 327 981 7 987 PB.9485.1 chr18 + 1358 6 full-splice_match VAPA ENST00000400000.6 6815 6 248 5209 no_subtype FALSE canonical NA NA 598 None 157 1 0 FALSE 0 0 NA A coding 242 726 29 754 PB.2597.1 chr3 - 1400 1 incomplete-splice_match TBL1XR1 ENST00000457928.6 4101 16 2692 10 no_subtype FALSE canonical NA NA NA None 41 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5550.2 chr9 - 2996 17 novel_not_in_catalog ZER1 novel NA NA NA NA no_subtype FALSE canonical NA NA 346 None 2 1 0 TRUE 0 0 NA B coding 766 2298 441 2738 PB.9774.1 chr19 + 3525 18 full-splice_match LDLR ENST00000558518.5 3617 18 109 -17 no_subtype FALSE canonical NA NA 2625 None 2 6 1 FALSE 0 0 NA A coding 860 2580 79 2658 PB.3673.1 chr5 + 2827 16 full-splice_match GRK6 ENST00000355472.9 2939 16 172 -60 no_subtype TRUE canonical NA NA 1673 None 15 8 1 FALSE 0 0 NA A coding 544 1632 93 1724 PB.2655.5 chr3 + 4169 8 novel_not_in_catalog ST6GAL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2994 None 23 19 1 TRUE 0 0 NA B coding 406 1218 215 1432 PB.7959.84 chr14 - 1548 7 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 122 None 2 15 1 TRUE 0 0 NA B coding 119 357 77 433 PB.6052.1 chr10 + 3239 1 genic_intron novelGene_1049 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A coding 139 417 1556 1972 PB.2158.2 chr3 + 4615 10 full-splice_match KLHL18 ENST00000232766.5 4620 10 -1 6 no_subtype FALSE canonical NA NA 1359 None 4 15 0 FALSE 0 0 NA A coding 574 1722 22 1743 PB.1532.1 chr2 + 2594 2 genic_intron novelGene_960 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2345 None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2686.3 chr3 - 1512 2 novel_not_in_catalog RNF168 novel NA NA NA NA no_subtype TRUE canonical NA NA 276 None 2 14 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.5444.1 chr9 + 1338 1 incomplete-splice_match SNX30 ENST00000374232.7 7622 9 6272 13 no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4707.1 chr7 + 2642 2 genic_intron novelGene_1179 novel NA NA NA NA no_subtype FALSE canonical NA NA 206 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7983.1 chr15 - 2485 2 incomplete-splice_match SLC12A6 ENST00000560164.5 3744 24 2899 -1640 5prime_fragment FALSE canonical NA NA 134 None 2 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7983.2 chr15 - 1878 1 incomplete-splice_match SLC12A6 ENST00000290209.9 7286 25 3783 1626 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9499.1 chr18 - 1672 4 novel_not_in_catalog FAM210A novel NA NA NA NA no_subtype TRUE canonical NA NA 146 None 4 8 1 FALSE 0 0 NA A coding 272 816 175 990 PB.2229.1 chr3 - 648 4 full-splice_match RPL29 ENST00000294189.10 723 4 43 32 no_subtype FALSE canonical NA NA 43 None 5 2 0 FALSE 0 0 NA A coding 159 477 52 528 PB.1634.1 chr2 - 2860 1 genic_intron novelGene_1225 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 19 0 FALSE 0 0 NA A coding 127 381 1268 1648 PB.3101.1 chr4 + 3049 1 genic_intron novelGene_1255 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4791.2 chr8 + 2459 14 novel_in_catalog TNKS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2021 None 2 18 1 FALSE 0 0 NA C coding 740 2220 21 2240 PB.4529.3 chr7 + 1413 7 novel_not_in_catalog ARPC1A novel NA NA NA NA no_subtype FALSE canonical NA NA 818 None 2 2 1 TRUE 0 0 NA C coding 238 714 102 815 PB.4791.1 chr8 + 6140 27 full-splice_match TNKS ENST00000310430.10 9620 27 16 3464 no_subtype FALSE canonical NA NA 3907 None 4 23 0 FALSE 0 0 NA C coding 1327 3981 11 3991 PB.9200.6 chr17 + 3003 7 novel_not_in_catalog SP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1773 None 4 9 2 TRUE 0 0 NA C coding 495 1485 387 1871 PB.1985.1 chr3 - 1451 12 full-splice_match CAMK1 ENST00000256460.7 1488 12 24 13 no_subtype FALSE canonical NA NA 122 None 7 1 0 FALSE 0 0 NA A coding 370 1110 155 1264 PB.1985.2 chr3 - 1904 9 full-splice_match TADA3 ENST00000301964.6 2355 9 334 117 no_subtype FALSE canonical NA NA 198 None 36 1 0 FALSE 0 0 NA C coding 432 1296 226 1521 PB.1985.3 chr3 - 1725 9 novel_not_in_catalog TADA3 novel NA NA NA NA no_subtype FALSE canonical NA NA 216 None 2 5 1 TRUE 0 0 NA C coding 369 1107 244 1350 PB.9200.3 chr17 + 3034 9 novel_not_in_catalog SP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1803 None 2 6 0 TRUE 0 0 NA C coding 606 1818 84 1901 PB.9200.1 chr17 + 3011 7 full-splice_match SP2 ENST00000376741.4 3112 7 97 4 no_subtype FALSE canonical NA NA 1781 None 22 4 0 FALSE 0 0 NA C coding 606 1818 62 1879 PB.10170.1 chr19 - 3505 24 full-splice_match PPP6R1 ENST00000412770.6 3961 24 455 1 no_subtype FALSE canonical NA NA 106 None 8 4 0 FALSE 0 0 NA C coding 881 2643 113 2755 PB.2513.7 chr3 - 1567 9 novel_in_catalog SLC9A9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 321 None 4 2 0 FALSE 0 0 NA A coding 377 1131 147 1277 PB.3859.3 chr6 - 3467 4 novel_not_in_catalog NUDT3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 102 None 2 20 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.10128.6 chr19 - 1298 9 novel_not_in_catalog NAPSB novel NA NA NA NA no_subtype FALSE canonical NA NA 83 None 7 3 0 FALSE 0 0 NA C coding 432 1296 1 1296 PB.7636.1 chr14 + 2092 10 full-splice_match NOP9 ENST00000267425.7 6033 10 32 3909 no_subtype FALSE canonical NA NA 1814 None 4 1 0 FALSE 0 0 NA A coding 636 1908 62 1969 PB.10128.2 chr19 - 1508 11 novel_not_in_catalog NAPSB novel NA NA NA NA no_subtype FALSE canonical NA NA 69 None 2 5 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.10128.3 chr19 - 1707 10 novel_not_in_catalog NAPSB novel NA NA NA NA no_subtype FALSE canonical NA NA 92 None 12 4 0 TRUE 0 0 NA C coding 247 741 10 750 PB.10128.1 chr19 - 1329 9 novel_not_in_catalog NAPSB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 83 None 497 5 1 TRUE 0 0 NA C coding 224 672 1 672 PB.3165.1 chr5 + 5855 7 incomplete-splice_match ICE1 ENST00000296564.8 7927 19 2050 22 internal_fragment FALSE canonical NA NA 4791 None 3 8 0 FALSE 0 0 NA A coding 1648 4944 27 4970 PB.5731.1 chr10 - 2855 14 full-splice_match EPC1 ENST00000319778.10 4057 14 60 1142 no_subtype FALSE canonical NA NA 396 None 2 1 0 FALSE 0 0 NA A coding 773 2319 364 2682 PB.1578.1 chr2 - 1987 11 novel_not_in_catalog LIMS2 novel NA NA NA NA no_subtype TRUE canonical NA NA 136 None 17 9 1 TRUE 0 0 NA A coding 341 1023 126 1148 PB.1292.1 chr2 - 2954 2 genic_intron novelGene_404 novel NA NA NA NA no_subtype FALSE canonical NA NA 2654 None 2 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10128.9 chr19 - 1475 11 fusion NAPSA,NAPSB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 93 None 3 5 2 TRUE 0 0 NA A coding 182 546 928 1473 PB.10922.1 chrX + 2558 1 full-splice_match RP5-1172N10.4 ENST00000602481.1 651 1 386 -2293 no_subtype FALSE canonical NA NA NA None 6 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.973.4 chr1 + 2776 8 novel_in_catalog TMEM183A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2093 None 8 4 0 FALSE 0 0 NA C coding 215 645 74 718 PB.2460.2 chr3 + 3036 18 novel_not_in_catalog ACAD9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1694 None 4 16 1 TRUE 0 0 NA C coding 498 1494 299 1792 PB.10037.1 chr19 - 1950 9 full-splice_match KCNN4 ENST00000262888.7 2240 9 284 6 no_subtype FALSE canonical NA NA 271 None 7 5 1 FALSE 0 0 NA A coding 427 1281 113 1393 PB.9491.1 chr18 + 1464 8 full-splice_match IMPA2 ENST00000269159.7 1534 8 62 8 no_subtype FALSE canonical NA NA 931 None 5 4 0 FALSE 0 0 NA A coding 288 864 181 1044 PB.7296.1 chr12 - 3118 21 novel_not_in_catalog TAOK3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 249 None 43 9 1 TRUE 0 0 NA B coding 898 2694 410 3103 PB.6617.15 chr11 - 1555 4 novel_not_in_catalog CARD16 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 38 None 2 6 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.6906.1 chr12 + 2921 22 incomplete-splice_match LRRK2 ENST00000343742.6 4740 27 36 1783 3prime_fragment FALSE canonical NA NA 2893 None 23 2 0 FALSE 0 0 NA B coding 945 2835 86 2920 PB.5751.1 chr10 + 3043 9 novel_not_in_catalog HSD17B7P2 novel NA NA NA NA no_subtype FALSE canonical NA NA 976 None 2 18 0 FALSE 0 0 NA A coding 262 786 73 858 PB.4036.1 chr6 - 2029 5 novel_in_catalog EPHA7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 310 None 2 2 0 FALSE 0 0 NA A coding 449 1347 214 1560 PB.1991.1 chr3 + 1759 11 full-splice_match CRELD1 ENST00000397170.7 1728 11 -6 -25 no_subtype FALSE canonical NA NA 1104 None 17 4 0 FALSE 0 0 NA A coding 420 1260 57 1316 PB.9370.3 chr17 + 2928 24 novel_in_catalog MYO15B novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 2476 None 3 3 0 FALSE 0 0 NA B coding 747 2241 311 2551 PB.769.7 chr1 + 3109 5 novel_in_catalog MNDA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2804 None 4 9 0 FALSE 0 0 NA C coding 173 519 2331 2849 PB.10835.1 chr22 + 1374 10 full-splice_match CRELD2 ENST00000328268.8 1357 10 -15 -2 no_subtype FALSE canonical NA NA 1098 None 18 1 0 FALSE 0 0 NA A coding 353 1059 90 1148 PB.1004.2 chr1 + 5780 20 novel_in_catalog SRGAP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2827 None 2 20 2 FALSE 0 0 NA B coding 833 2499 649 3147 PB.8719.1 chr16 + 3987 26 novel_not_in_catalog FUK novel NA NA NA NA no_subtype FALSE canonical NA NA 3295 None 2 4 0 TRUE 0 0 NA A coding 1084 3252 143 3394 PB.524.1 chr1 + 2783 2 full-splice_match S1PR1 ENST00000475821.1 763 2 -26 -1994 no_subtype FALSE canonical NA NA 91 None 39 1 0 FALSE 0 0 NA C coding 382 1146 255 1400 PB.6193.1 chr11 - 3383 10 novel_not_in_catalog TMEM41B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 229 None 30 20 2 TRUE 0 0 NA B coding 291 873 109 981 PB.6193.2 chr11 - 2880 10 novel_not_in_catalog TMEM41B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 229 None 2 18 2 TRUE 0 0 NA B coding 291 873 109 981 PB.8009.1 chr15 - 2429 7 incomplete-splice_match INO80 ENST00000361937.7 6439 36 4005 5 5prime_fragment FALSE canonical NA NA 149 None 2 15 0 FALSE 0 0 NA B coding 350 1050 39 1088 PB.9647.4 chr19 + 2492 7 full-splice_match SCAMP4 ENST00000316097.12 2684 7 187 5 no_subtype FALSE canonical NA NA 593 None 3 19 0 FALSE 0 0 NA C coding 229 687 81 767 PB.4638.2 chr7 - 2816 19 full-splice_match POT1 ENST00000357628.7 4080 19 132 1132 no_subtype FALSE canonical NA NA 56 None 18 3 0 FALSE 0 0 NA C coding 634 1902 468 2369 PB.4638.3 chr7 - 3153 20 novel_not_in_catalog POT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 26 None 2 15 2 TRUE 0 0 NA C coding 634 1902 552 2453 PB.9647.1 chr19 + 2492 8 novel_not_in_catalog SCAMP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 601 None 14 18 0 TRUE 0 0 NA C coding 229 687 81 767 PB.7557.1 chr13 - 1434 3 novel_not_in_catalog RP11-12G12.7 novel NA NA NA NA no_subtype TRUE canonical NA NA 312 None 2 3 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.6021.2 chr10 - 2908 5 novel_in_catalog SMNDC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 167 None 4 11 0 FALSE 0 0 NA C coding 99 297 1504 1800 PB.3374.1 chr5 - 4145 8 full-splice_match ARRDC3 ENST00000265138.3 4188 8 39 4 no_subtype TRUE canonical NA NA 508 None 2 13 0 FALSE 0 0 NA A coding 414 1242 229 1470 PB.9756.2 chr19 - 3470 13 full-splice_match RAVER1 ENST00000617231.4 3501 13 19 12 no_subtype FALSE canonical NA NA 239 None 34 3 0 FALSE 0 0 NA A coding 739 2217 21 2237 PB.3620.4 chr5 - 3403 12 novel_not_in_catalog CLINT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 162 None 2 19 1 TRUE 0 0 NA C coding 625 1875 179 2053 PB.10541.1 chr21 - 3077 8 novel_not_in_catalog ATP5O novel NA NA NA NA no_subtype FALSE canonical NA NA 44 None 11 23 1 TRUE 0 0 NA A coding 213 639 9 647 PB.10541.2 chr21 - 3723 3 antisense novelGene_LINC00649_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 765 None 2 20 0 FALSE 0 0 NA A coding 69 207 89 295 PB.9395.1 chr17 + 2038 13 full-splice_match MFSD11 ENST00000588460.5 3612 13 1724 -150 no_subtype FALSE canonical NA NA 1503 None 5 2 0 FALSE 0 0 NA C coding 449 1347 319 1665 PB.6965.1 chr12 - 3574 8 full-splice_match LIMA1 ENST00000552823.5 3254 8 -324 4 no_subtype FALSE canonical NA NA 652 None 2 11 0 FALSE 0 0 NA C coding 599 1797 503 2299 PB.4787.2 chr8 - 3045 1 genic_intron novelGene_59 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 29 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9092.1 chr17 + 1471 7 full-splice_match PPP1R1B ENST00000254079.8 1845 7 365 9 no_subtype FALSE canonical NA NA 669 None 4 2 0 FALSE 0 0 NA A coding 204 612 105 716 PB.11147.1 chrX + 3274 21 full-splice_match XPNPEP2 ENST00000371106.3 3270 21 34 -38 no_subtype FALSE canonical NA NA 1988 None 8 2 0 FALSE 0 0 NA A coding 674 2022 159 2180 PB.7362.4 chr12 - 1506 4 novel_not_in_catalog UBC novel NA NA NA NA no_subtype TRUE canonical NA NA 64 None 3 1 0 TRUE 0 0 NA B coding 457 1371 68 1438 PB.303.1 chr1 - 1479 1 incomplete-splice_match FOXJ3 ENST00000372571.5 4468 3 2978 12 no_subtype FALSE canonical NA NA NA None 16 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5460.10 chr9 - 5500 23 fusion RP11-9M16.2,AKNA novel NA NA NA NA no_subtype FALSE canonical NA NA 25 None 8 11 1 FALSE 0 0 NA B coding 1439 4317 257 4573 PB.9999.2 chr19 + 2310 18 full-splice_match SHKBP1 ENST00000291842.9 2363 18 49 4 no_subtype FALSE canonical NA NA 1892 None 21 1 0 FALSE 0 0 NA C coding 707 2121 1 2121 PB.9999.1 chr19 + 2628 17 novel_in_catalog SHKBP1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 2211 None 8 7 1 FALSE 0 0 NA C coding 508 1524 18 1541 PB.5460.13 chr9 - 5472 23 fusion RP11-9M16.2,AKNA novel NA NA NA NA no_subtype FALSE canonical NA NA 65 None 2 9 0 FALSE 0 0 NA B coding 899 2697 1849 4545 PB.7318.1 chr12 - 1709 1 genic_intron novelGene_1055 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8015.1 chr15 + 3545 9 full-splice_match MGA ENST00000566718.5 3439 9 32 -138 no_subtype FALSE canonical NA NA 3233 None 17 3 0 FALSE 0 0 NA A coding 1132 3396 150 3545 PB.7600.1 chr14 - 1933 15 full-splice_match NDRG2 ENST00000554143.5 1980 15 44 3 no_subtype FALSE canonical NA NA 33 None 29 8 1 FALSE 0 0 NA C coding 357 1071 40 1110 PB.7600.2 chr14 - 1968 15 full-splice_match NDRG2 ENST00000360463.7 2047 15 75 4 no_subtype FALSE canonical NA NA 68 None 2 7 1 FALSE 0 0 NA C coding 357 1071 75 1145 PB.10262.2 chr20 - 2988 20 novel_not_in_catalog GPCPD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 159 None 5 6 1 TRUE 0 0 NA C coding 491 1473 655 2127 PB.10262.1 chr20 - 2934 20 full-splice_match GPCPD1 ENST00000379019.5 5489 20 157 2398 no_subtype FALSE canonical NA NA 28 None 17 4 1 FALSE 0 0 NA C coding 672 2016 57 2072 PB.5953.1 chr10 + 1684 3 full-splice_match UBTD1 ENST00000370664.3 1706 3 15 7 no_subtype FALSE canonical NA NA 619 None 2 3 0 FALSE 0 0 NA A coding 227 681 322 1002 PB.10262.6 chr20 - 6023 5 novel_not_in_catalog GPCPD1 novel NA NA NA NA no_subtype TRUE canonical NA NA 145 None 2 40 1 TRUE 0 0 NA C coding 114 342 174 515 PB.10262.5 chr20 - 2941 19 novel_in_catalog GPCPD1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 110 None 2 4 2 FALSE 0 0 NA C coding 491 1473 606 2078 PB.10262.4 chr20 + 2759 1 full-splice_match EIF4EP1 ENST00000422311.1 642 1 -1861 -256 no_subtype FALSE canonical NA NA NA None 6 22 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10013.1 chr19 + 2102 1 full-splice_match AC005795.1 ENST00000600996.1 747 1 -68 -1287 no_subtype FALSE canonical NA NA NA None 3 13 0 FALSE 0 0 NA A coding 144 432 380 811 PB.9328.1 chr17 - 5816 40 novel_not_in_catalog ABCA8 novel NA NA NA NA no_subtype FALSE canonical NA NA 153 None 8 6 0 TRUE 0 0 NA A coding 1621 4863 159 5021 PB.1326.1 chr2 + 3084 16 full-splice_match MSH2 ENST00000233146.6 3307 16 215 8 no_subtype FALSE canonical NA NA 2642 None 50 2 0 FALSE 0 0 NA A coding 934 2802 9 2810 PB.1004.4 chr1 + 3571 19 novel_in_catalog SRGAP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2295 None 2 2 0 FALSE 0 0 NA B coding 805 2415 29 2443 PB.6686.1 chr11 + 3184 16 full-splice_match VPS11 ENST00000621676.4 3313 16 115 14 no_subtype FALSE canonical NA NA 2678 None 38 2 0 FALSE 0 0 NA A coding 941 2823 18 2840 PB.4369.2 chr7 - 2035 9 full-splice_match HERPUD2 ENST00000311350.7 2474 9 254 185 no_subtype FALSE canonical NA NA 81 None 15 2 0 FALSE 0 0 NA C coding 406 1218 379 1596 PB.4369.1 chr7 - 1616 2 genic HERPUD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1237 None 2 9 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.800.6 chr1 - 2399 12 full-splice_match ARHGAP30 ENST00000368013.7 4394 12 131 1864 no_subtype FALSE canonical NA NA 287 None 57 6 0 FALSE 0 0 NA C coding 736 2208 191 2398 PB.10606.3 chr21 + 4130 36 novel_not_in_catalog COL6A1 novel NA NA NA NA no_subtype TRUE canonical NA NA 3372 None 23 6 1 TRUE 0 0 NA C coding 1028 3084 97 3180 PB.6686.7 chr11 + 1735 1 novel_in_catalog HMBS novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6686.6 chr11 + 1470 15 novel_not_in_catalog HMBS novel NA NA NA NA no_subtype FALSE canonical NA NA 1032 None 12 0 0 TRUE 0 0 NA C coding 361 1083 121 1203 PB.8303.3 chr15 - 3059 15 full-splice_match PRC1 ENST00000394249.7 3034 15 -38 13 no_subtype FALSE canonical NA NA 127 None 3 13 0 FALSE 0 0 NA C coding 620 1860 117 1976 PB.8303.2 chr15 - 2922 14 novel_in_catalog PRC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 105 None 5 10 0 FALSE 0 0 NA C coding 566 1698 95 1792 PB.8303.1 chr15 - 3062 14 full-splice_match PRC1 ENST00000361188.9 4087 14 1055 -30 no_subtype FALSE canonical NA NA 168 None 11 9 0 FALSE 0 0 NA C coding 606 1818 158 1975 PB.3011.3 chr4 - 3598 18 novel_in_catalog CAMK2D novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 138 None 7 12 0 FALSE 0 0 NA B coding 477 1431 74 1504 PB.1977.2 chr3 + 1401 1 novel_in_catalog BHLHE40 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA C coding 177 531 372 902 PB.1977.1 chr3 + 2850 5 full-splice_match BHLHE40 ENST00000256495.3 3473 5 476 147 no_subtype FALSE canonical NA NA 509 None 73 7 0 FALSE 0 0 NA C coding 412 1236 128 1363 PB.4946.1 chr8 + 1748 1 full-splice_match KRT8P3 ENST00000519669.1 1449 1 -62 -237 no_subtype FALSE canonical NA NA NA None 526 4 0 FALSE 0 0 NA A coding 424 1272 240 1511 PB.4946.2 chr8 - 2792 15 novel_not_in_catalog ASPH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 219 None 2 10 1 FALSE 0 0 NA B coding 255 765 291 1055 PB.10933.1 chrX + 1934 6 full-splice_match KRBOX4 ENST00000298190.10 1354 6 -41 -539 no_subtype FALSE canonical NA NA 475 None 3 4 0 FALSE 0 0 NA A coding 166 498 238 735 PB.5474.1 chr9 - 1858 8 full-splice_match FBXW2 ENST00000608872.5 9138 8 0 7280 no_subtype FALSE canonical NA NA 59 None 14 7 1 FALSE 0 0 NA C coding 454 1362 189 1550 PB.5474.2 chr9 - 1806 8 novel_in_catalog FBXW2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 80 None 2 2 0 FALSE 0 0 NA C coding 325 975 505 1479 PB.8282.3 chr15 - 4342 22 novel_in_catalog POLG novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 152 None 3 5 0 FALSE 0 0 NA C coding 1203 3609 312 3920 PB.5282.2 chr9 - 1528 9 novel_not_in_catalog ARHGEF39 novel NA NA NA NA no_subtype FALSE canonical NA NA 115 None 5 4 0 FALSE 0 0 NA A coding 88 264 716 979 PB.10351.11 chr20 - 2807 1 genic_intron novelGene_349 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4309.1 chr7 - 2951 9 novel_not_in_catalog AGR2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 66 None 6 11 0 TRUE 0 0 NA A coding 175 525 74 598 PB.820.1 chr1 + 3098 1 incomplete-splice_match DDR2 ENST00000367922.7 10160 19 6229 834 no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9623.1 chr19 + 927 5 full-splice_match GZMM ENST00000264553.5 940 5 12 1 no_subtype TRUE canonical NA NA 637 None 5 4 0 FALSE 0 0 NA A coding 257 771 26 796 PB.7509.1 chr13 + 3367 10 novel_not_in_catalog CKAP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1913 None 8 16 0 TRUE 0 0 NA A coding 682 2046 112 2157 PB.3071.2 chr4 - 3129 7 novel_not_in_catalog SLC10A7 novel NA NA NA NA no_subtype FALSE canonical NA NA 319 None 2 12 0 TRUE 0 0 NA B coding 159 477 220 696 PB.1163.2 chr1 - 1384 2 novel_not_in_catalog RP11-488L18.4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 186 None 3 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.625.1 chr1 - 2776 6 full-splice_match RBM8A ENST00000583313.6 4961 6 83 2102 no_subtype FALSE canonical NA NA 94 None 13 10 0 FALSE 0 0 NA A coding 174 522 28 549 PB.3071.1 chr4 - 3759 14 novel_not_in_catalog SLC10A7 novel NA NA NA NA no_subtype TRUE canonical NA NA 335 None 4 15 0 TRUE 0 0 NA B coding 340 1020 236 1255 PB.5089.1 chr8 + 1802 1 genic_intron novelGene_1054 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.442.1 chr1 + 3005 11 novel_in_catalog NEXN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1575 None 2 17 0 FALSE 0 0 NA A coding 597 1791 151 1941 PB.5303.1 chr9 - 2505 1 genic_intron novelGene_373 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4288.1 chr7 - 2803 16 novel_not_in_catalog DAGLB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 55 None 33 10 1 TRUE 0 0 NA A coding 672 2016 84 2099 PB.4259.3 chr6 + 1545 2 novel_not_in_catalog TBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1382 None 4 12 1 TRUE 0 0 NA C coding 116 348 865 1212 PB.5766.1 chr10 + 1130 7 full-splice_match TIMM23 ENST00000580018.3 1222 7 62 30 no_subtype FALSE canonical NA NA 628 None 2 4 0 FALSE 0 0 NA A coding 209 627 115 741 PB.471.2 chr1 - 2121 13 novel_not_in_catalog GBP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 60 None 2 3 3 TRUE 0 0 NA C coding 591 1773 240 2012 PB.6818.1 chr12 + 1623 1 genic_intron novelGene_68 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6672.1 chr11 + 5617 10 incomplete-splice_match KMT2A ENST00000534358.5 16602 36 9745 1240 internal_fragment FALSE canonical NA NA 1921 None 6 14 0 FALSE 0 0 NA B coding 718 2154 41 2194 PB.6672.2 chr11 + 1795 1 incomplete-splice_match KMT2A ENST00000534358.5 16602 36 13563 1245 no_subtype FALSE canonical NA NA NA None 11 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10983.2 chrX - 5929 25 novel_in_catalog KDM5C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 476 None 3 9 1 FALSE 0 0 NA C coding 710 2130 2994 5123 PB.5782.1 chr10 - 3229 2 genic CSTF2T novel NA NA NA NA no_subtype TRUE canonical NA NA 2690 None 4 11 1 FALSE 0 0 NA A coding 616 1848 49 1896 PB.7602.11 chr14 - 1333 9 novel_not_in_catalog HNRNPC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 121 None 9 3 2 TRUE 0 0 NA C coding 292 876 173 1048 PB.313.1 chr1 + 1633 11 full-splice_match CDC20 ENST00000310955.10 1675 11 24 18 no_subtype FALSE canonical NA NA 1398 None 12 1 0 FALSE 0 0 NA C coding 499 1497 78 1574 PB.313.2 chr1 + 1539 10 full-splice_match CDC20 ENST00000372462.1 1777 10 234 4 no_subtype FALSE canonical NA NA 1290 None 4 2 0 FALSE 0 0 NA C coding 457 1371 96 1466 PB.3052.1 chr4 - 2972 1 genic_intron novelGene_1182 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.471.1 chr1 - 2067 11 full-splice_match GBP2 ENST00000370466.3 2220 11 84 69 no_subtype FALSE canonical NA NA 168 None 4 0 0 FALSE 0 0 NA C coding 591 1773 186 1958 PB.1320.1 chr2 + 3990 2 full-splice_match SOCS5 ENST00000394861.2 4058 2 50 18 no_subtype FALSE canonical NA NA 213 None 2 10 0 FALSE 0 0 NA A coding 530 1590 244 1833 PB.4121.2 chr6 - 2807 15 full-splice_match ARHGAP18 ENST00000368149.2 4462 15 4 1651 no_subtype FALSE canonical NA NA 198 None 5 6 0 FALSE 0 0 NA C coding 663 1989 86 2074 PB.1632.3 chr2 + 2714 2 antisense novelGene_ZEB2_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 1948 None 2 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2122.1 chr3 + 3287 12 novel_in_catalog NKTR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1480 None 16 5 0 FALSE 0 0 NA B coding 990 2970 318 3287 PB.7432.1 chr13 - 3190 1 novel_in_catalog RP11-141M1.3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2400.3 chr3 + 1399 7 novel_in_catalog POGLUT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 651 None 2 3 0 FALSE 0 0 NA C coding 269 807 14 820 PB.2353.8 chr3 - 3772 19 full-splice_match CBLB ENST00000264122.8 6780 19 59 2949 no_subtype FALSE canonical NA NA 249 None 5 2 0 FALSE 0 0 NA C coding 982 2946 264 3209 PB.742.16 chr1 + 1528 3 incomplete-splice_match SEMA4A ENST00000368284.5 2981 13 1443 10 internal_fragment FALSE canonical NA NA 199 None 4 2 0 FALSE 0 0 NA C coding 224 672 118 789 PB.5093.1 chr8 - 1718 1 genic_intron novelGene_1067 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3700.5 chr5 - 2643 5 novel_not_in_catalog MGAT1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 108 None 3 15 3 TRUE 0 0 NA B coding 445 1335 237 1571 PB.8190.1 chr15 - 2991 2 antisense novelGene_THSD4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1558 None 5 24 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3700.7 chr5 - 3075 4 novel_not_in_catalog MGAT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 114 None 44 9 1 TRUE 0 0 NA B coding 445 1335 670 2004 PB.2241.1 chr3 - 2744 4 incomplete-splice_match PBRM1 ENST00000356770.8 7523 28 4263 516 5prime_fragment FALSE canonical NA NA 88 None 2 12 0 FALSE 0 0 NA B coding 180 540 7 546 PB.1330.2 chr2 + 3201 1 novel_in_catalog PPP1R21 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 26 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5675.19 chr10 + 3771 1 genic_intron novelGene_88 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3700.3 chr5 - 2851 3 novel_not_in_catalog MGAT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 321 None 60 10 0 TRUE 0 0 NA B coding 445 1335 448 1782 PB.1330.1 chr2 + 3086 22 full-splice_match PPP1R21 ENST00000294952.12 3142 22 53 3 no_subtype FALSE canonical NA NA 2417 None 48 4 0 FALSE 0 0 NA C coding 780 2340 105 2444 PB.4756.1 chr7 + 3041 5 novel_not_in_catalog CHPF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1596 None 36 5 1 TRUE 0 0 NA A coding 772 2316 586 2901 PB.702.1 chr1 + 3363 25 novel_in_catalog UBAP2L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2967 None 48 2 0 FALSE 0 0 NA C coding 982 2946 69 3014 PB.4756.2 chr7 + 6253 3 antisense novelGene_SMARCD3_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4776 None 2 34 2 FALSE 0 0 NA A coding 331 993 5122 6114 PB.1719.2 chr2 + 6650 13 novel_not_in_catalog AGPS novel NA NA NA NA no_subtype TRUE canonical NA NA 5021 None 2 42 1 TRUE 0 0 NA C coding 338 1014 10 1023 PB.2405.1 chr3 + 3028 11 novel_not_in_catalog NR1I2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3011 None 46 10 1 TRUE 0 0 NA C coding 379 1137 376 1512 PB.10340.1 chr20 - 2632 15 full-splice_match GGT7 ENST00000336431.9 2642 15 5 5 no_subtype FALSE canonical NA NA 209 None 11 6 0 FALSE 0 0 NA A coding 662 1986 41 2026 PB.9293.1 chr17 - 2104 14 novel_not_in_catalog CCDC47 novel NA NA NA NA no_subtype FALSE canonical NA NA 158 None 26 3 0 TRUE 0 0 NA A coding 483 1449 178 1626 PB.10051.1 chr19 + 2686 19 novel_in_catalog CLASRP novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 2535 None 2 6 0 FALSE 0 0 NA A coding 474 1422 74 1495 PB.7889.1 chr14 + 1560 5 full-splice_match SERPINA3 ENST00000393078.4 1589 5 17 12 no_subtype FALSE canonical NA NA 1130 None 8 3 2 FALSE 0 0 NA A coding 423 1269 63 1331 PB.9237.1 chr17 + 1648 1 novel_in_catalog LUC7L3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.292.1 chr1 + 6230 8 full-splice_match RLF ENST00000372771.4 6246 8 14 2 no_subtype FALSE canonical NA NA 1102 None 11 4 0 FALSE 0 0 NA A coding 1914 5742 14 5755 PB.411.12 chr1 - 6325 19 novel_not_in_catalog JAK1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 136 None 3 33 2 TRUE 0 0 NA B coding 674 2022 14 2035 PB.2682.1 chr3 - 3997 15 novel_in_catalog TNK2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 41 None 2 11 1 FALSE 0 0 NA B coding 1040 3120 60 3179 PB.595.1 chr1 + 2962 4 incomplete-splice_match VANGL1 ENST00000369509.1 2062 7 932 -1832 internal_fragment FALSE canonical NA NA 394 None 2 14 0 FALSE 0 0 NA A coding 197 591 62 652 PB.2682.3 chr3 - 2828 7 novel_not_in_catalog TNK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 146 None 2 12 0 FALSE 0 0 NA B coding 550 1650 361 2010 PB.2353.1 chr3 - 3506 18 novel_in_catalog CBLB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 98 None 7 2 0 FALSE 0 0 NA C coding 938 2814 113 2926 PB.10456.1 chr20 + 2627 6 novel_not_in_catalog CASS4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1924 None 2 3 0 TRUE 0 0 NA A coding 671 2013 317 2329 PB.7660.1 chr14 + 2156 16 full-splice_match SRP54 ENST00000216774.10 2279 16 102 21 no_subtype FALSE canonical NA NA 1672 None 7 3 0 FALSE 0 0 NA A coding 504 1512 250 1761 PB.10488.1 chr20 + 1153 6 full-splice_match LIME1 ENST00000309546.7 1178 6 21 4 no_subtype FALSE canonical NA NA 651 None 8 3 0 FALSE 0 0 NA A coding 295 885 67 951 PB.3949.1 chr6 - 3844 22 full-splice_match AARS2 ENST00000244571.4 3854 22 -9 19 no_subtype TRUE canonical NA NA 255 None 28 7 0 FALSE 0 0 NA A coding 985 2955 13 2967 PB.7638.1 chr14 - 3397 26 full-splice_match ADCY4 ENST00000310677.8 3415 26 1 17 no_subtype TRUE canonical NA NA 87 None 2 0 0 FALSE 0 0 NA A coding 1077 3231 114 3344 PB.698.1 chr1 + 1544 10 full-splice_match CREB3L4 ENST00000368603.5 1557 10 7 6 no_subtype FALSE canonical NA NA 1065 None 2 3 0 FALSE 0 0 NA A coding 395 1185 72 1256 PB.10823.1 chr22 + 3620 2 novel_not_in_catalog FAM118A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1864 None 2 32 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.702.7 chr1 + 3856 26 full-splice_match UBAP2L ENST00000361546.6 3864 26 0 8 no_subtype FALSE canonical NA NA 3210 None 2 6 0 FALSE 0 0 NA C coding 1086 3258 46 3303 PB.1431.1 chr2 - 2872 4 full-splice_match MOGS ENST00000233616.8 2895 4 0 23 no_subtype FALSE canonical NA NA 515 None 33 1 0 FALSE 0 0 NA A coding 837 2511 164 2674 PB.7940.1 chr14 + 2823 2 intergenic novelGene_941 novel NA NA NA NA no_subtype FALSE canonical NA NA 94 None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2810.1 chr4 + 1572 11 full-splice_match LIAS ENST00000261434.7 1775 11 60 143 no_subtype TRUE canonical NA NA 1124 None 2 3 0 FALSE 0 0 NA A coding 372 1116 59 1174 PB.5676.1 chr10 - 3391 2 genic_intron novelGene_77 novel NA NA NA NA no_subtype FALSE canonical NA NA 2347 None 2 17 1 FALSE 0 0 NA A coding 113 339 1433 1771 PB.7147.1 chr12 - 3102 2 full-splice_match DUSP6 ENST00000547291.1 1074 2 -1330 -698 no_subtype FALSE canonical NA NA 1914 None 3 7 0 FALSE 0 0 NA C coding 256 768 1452 2219 PB.5676.3 chr10 - 2902 1 antisense novelGene_CELF2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7147.3 chr12 - 1551 1 novel_in_catalog DUSP6 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 8 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7147.4 chr12 - 3512 2 novel_in_catalog DUSP6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 858 None 4 10 0 FALSE 0 0 NA C coding 270 810 498 1307 PB.7147.5 chr12 - 2045 2 full-splice_match DUSP6 ENST00000308385.6 1959 2 -92 6 no_subtype FALSE canonical NA NA 858 None 5 7 0 FALSE 0 0 NA C coding 222 666 498 1163 PB.7881.1 chr14 - 3789 9 incomplete-splice_match BTBD7 ENST00000334746.9 8430 11 854 3787 5prime_fragment FALSE canonical NA NA 616 None 2 6 0 FALSE 0 0 NA A coding 950 2850 1 2850 PB.3866.1 chr6 + 3549 1 genic SCUBE3 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A coding 56 168 154 321 PB.8067.2 chr15 - 5747 36 novel_not_in_catalog FBN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 2 3 1 FALSE 0 0 NA A coding 1339 4017 20 4036 PB.4349.1 chr7 + 1614 1 genic_intron novelGene_288 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5415.1 chr9 + 1718 2 antisense novelGene_ABCA1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1580 None 9 7 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.618.1 chr1 + 3250 6 genic_intron novelGene_1220 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3122 None 2 29 5 FALSE 0 0 NA A non_coding NA NA NA NA PB.4724.2 chr7 + 3488 13 novel_not_in_catalog CASP2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2370 None 8 17 1 TRUE 0 0 NA B coding 452 1356 55 1410 PB.4724.3 chr7 + 3484 13 novel_not_in_catalog CASP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2365 None 5 20 1 TRUE 0 0 NA B coding 452 1356 22 1377 PB.7861.3 chr14 - 7948 32 novel_not_in_catalog CCDC88C novel NA NA NA NA no_subtype FALSE canonical NA NA 184 None 2 23 0 TRUE 0 0 NA B coding 1535 4605 125 4729 PB.8681.3 chr16 - 1810 13 incomplete-splice_match CENPT ENST00000440851.6 2200 14 386 4 5prime_fragment FALSE canonical NA NA 132 None 2 0 0 FALSE 0 0 NA B coding 561 1683 23 1705 PB.10328.1 chr20 + 3337 15 full-splice_match ZNF341 ENST00000375200.5 3579 15 236 6 no_subtype FALSE canonical NA NA 2061 None 2 5 0 FALSE 0 0 NA C coding 854 2562 27 2588 PB.10328.2 chr20 + 3313 15 full-splice_match ZNF341 ENST00000342427.6 3661 15 340 8 no_subtype FALSE canonical NA NA 2039 None 2 9 1 FALSE 0 0 NA C coding 847 2541 26 2566 PB.10328.3 chr20 - 3313 3 novel_not_in_catalog ZNF341-AS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 259 None 2 16 0 TRUE 0 0 NA A coding 109 327 2238 2564 PB.3785.30 chr6 - 5993 2 genic_intron novelGene_235 novel NA NA NA NA no_subtype FALSE canonical NA NA 1664 None 2 49 1 FALSE 0 0 NA B coding 106 318 4351 4668 PB.3785.33 chr6 - 1773 1 genic_intron novelGene_235 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2741.2 chr4 + 4340 18 full-splice_match SH3TC1 ENST00000515682.5 4293 18 -59 12 no_subtype FALSE canonical NA NA 3958 None 2 2 0 FALSE 0 0 NA C coding 1260 3780 434 4213 PB.2741.1 chr4 + 4259 18 full-splice_match SH3TC1 ENST00000245105.7 4226 18 -57 24 no_subtype FALSE canonical NA NA 3877 None 7 2 0 FALSE 0 0 NA C coding 1336 4008 125 4132 PB.3785.37 chr6 - 2970 1 genic_intron novelGene_238 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3785.38 chr6 - 1500 1 genic_intron novelGene_240 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.456.2 chr1 - 1235 3 full-splice_match C1orf52 ENST00000471115.5 1219 3 -19 3 no_subtype FALSE canonical NA NA 304 None 2 6 0 FALSE 0 0 NA C coding 182 546 29 574 PB.456.1 chr1 - 1377 4 full-splice_match C1orf52 ENST00000294661.8 3391 4 -4 2018 no_subtype FALSE canonical NA NA 319 None 3 6 0 FALSE 0 0 NA C coding 100 300 44 343 PB.1564.1 chr2 + 1884 2 full-splice_match TMEM37 ENST00000306406.4 1688 2 -11 -185 no_subtype FALSE canonical NA NA 67 None 13 9 0 FALSE 0 0 NA A coding 190 570 47 616 PB.2235.1 chr3 + 2837 2 genic_intron novelGene_520 novel NA NA NA NA no_subtype FALSE canonical NA NA 188 None 5 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2857.1 chr4 - 3062 18 novel_in_catalog CENPC novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 226 None 2 7 1 FALSE 0 0 NA B coding 911 2733 209 2941 PB.5664.5 chr10 + 2298 1 incomplete-splice_match PFKFB3 ENST00000379789.8 4157 15 1856 4 no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA C coding 138 414 1695 2108 PB.2857.2 chr4 - 1458 8 incomplete-splice_match CENPC ENST00000510189.5 2917 14 -60 1519 internal_fragment FALSE canonical NA NA 226 None 3 0 0 FALSE 0 0 NA B coding 416 1248 209 1456 PB.8444.3 chr16 + 3792 1 genic_intron novelGene_100 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5664.1 chr10 + 4160 15 full-splice_match PFKFB3 ENST00000379789.8 4157 15 -6 3 no_subtype FALSE canonical NA NA 1525 None 5 20 0 FALSE 0 0 NA C coding 500 1500 71 1570 PB.8444.1 chr16 + 2875 22 novel_not_in_catalog SNX29 novel NA NA NA NA no_subtype TRUE canonical NA NA 2264 None 3 5 0 TRUE 0 0 NA A coding 772 2316 90 2405 PB.5664.3 chr10 + 3625 10 novel_not_in_catalog PFKFB3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2856 None 2 16 1 TRUE 0 0 NA C coding 337 1011 38 1048 PB.5501.1 chr9 - 3134 4 genic_intron novelGene_1085 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 818 None 4 20 3 FALSE 0 0 NA A coding 103 309 2813 3121 PB.4972.5 chr8 - 3055 1 antisense novelGene_RP11-463D19.1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.14.1 chr1 - 2950 20 full-splice_match CDK11B ENST00000341832.10 2998 20 41 7 no_subtype FALSE canonical NA NA 58 None 2 7 1 FALSE 0 0 NA A coding 627 1881 537 2417 PB.5504.1 chr9 - 1517 1 incomplete-splice_match SCAI ENST00000336505.10 12079 18 10559 4 no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.54.2 chr1 + 1779 10 novel_in_catalog RP4-635E18.9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1437 None 2 3 1 FALSE 0 0 NA A coding 295 885 98 982 PB.2980.2 chr4 - 3146 9 full-splice_match SLC39A8 ENST00000356736.4 3144 9 -8 6 no_subtype FALSE canonical NA NA 138 None 27 8 0 FALSE 0 0 NA C coding 460 1380 392 1771 PB.54.1 chr1 + 2861 6 full-splice_match TARDBP ENST00000240185.7 5367 6 261 2245 no_subtype FALSE canonical NA NA 809 None 121 4 1 FALSE 0 0 NA C coding 414 1242 96 1337 PB.54.4 chr1 + 1524 1 incomplete-splice_match TARDBP ENST00000240185.7 5367 6 1452 2392 no_subtype FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9385.3 chr17 - 2787 9 novel_in_catalog PRPSAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 394 None 2 9 0 FALSE 0 0 NA C coding 311 933 225 1157 PB.5830.1 chr10 - 1925 8 novel_not_in_catalog C10orf54 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 168 None 3 6 1 TRUE 0 0 NA C coding 311 933 87 1019 PB.2521.2 chr3 - 2876 8 novel_in_catalog HLTF novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 216 None 2 12 0 FALSE 0 0 NA C coding 332 996 197 1192 PB.2521.1 chr3 - 5320 25 full-splice_match HLTF ENST00000310053.9 5317 25 -4 1 no_subtype FALSE canonical NA NA 218 None 3 21 1 FALSE 0 0 NA C coding 1009 3027 199 3225 PB.4539.1 chr7 + 3976 1 antisense novelGene_TRIM4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 32 0 FALSE 0 0 NA A coding 105 315 2587 2901 PB.4419.4 chr7 - 2857 2 antisense novelGene_IKZF1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2640 None 3 10 1 FALSE 0 0 NA A coding 109 327 389 715 PB.464.1 chr1 + 1463 9 full-splice_match SH3GLB1 ENST00000370558.8 6371 9 32 4876 no_subtype FALSE canonical NA NA 1282 None 2 1 0 FALSE 0 0 NA C coding 365 1095 293 1387 PB.8702.1 chr16 + 1498 2 genic_intron novelGene_656 novel NA NA NA NA no_subtype TRUE canonical NA NA 561 None 2 9 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7816.1 chr14 + 2778 15 full-splice_match DLST ENST00000334220.8 2838 15 53 7 no_subtype FALSE canonical NA NA 1235 None 51 7 1 FALSE 0 0 NA C coding 453 1359 9 1367 PB.10878.1 chrX - 3578 6 full-splice_match PIGA ENST00000333590.5 3652 6 55 19 no_subtype FALSE canonical NA NA 25 None 8 11 1 FALSE 0 0 NA A coding 484 1452 88 1539 PB.5951.2 chr10 + 1689 10 full-splice_match ZDHHC16 ENST00000352634.8 1718 10 24 5 no_subtype FALSE canonical NA NA 1104 None 4 0 0 FALSE 0 0 NA C coding 361 1083 134 1216 PB.1188.1 chr2 + 1776 5 full-splice_match HPCAL1 ENST00000307845.7 1751 5 -27 2 no_subtype FALSE canonical NA NA 892 None 13 3 0 FALSE 0 0 NA C coding 193 579 409 987 PB.7163.3 chr12 + 5745 3 antisense novelGene_RP11-74K11.2_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4922 None 2 29 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.1188.3 chr2 + 1481 4 novel_in_catalog HPCAL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 597 None 2 2 0 FALSE 0 0 NA C coding 193 579 114 692 PB.1188.2 chr2 + 1866 1 novel_in_catalog HPCAL1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4965.1 chr8 - 5999 19 novel_not_in_catalog NCOA2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 105 None 2 20 6 TRUE 0 0 NA C coding 1083 3249 1761 5009 PB.3352.1 chr5 + 2683 2 genic_intron novelGene_752 novel NA NA NA NA no_subtype FALSE canonical NA NA 552 None 2 20 1 FALSE 0 0 NA A coding 49 147 180 326 PB.10083.2 chr19 + 5645 2 genic NAPA-AS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 4511 None 2 28 0 TRUE 0 0 NA A coding 108 324 1031 1354 PB.10083.3 chr19 - 2579 2 novel_not_in_catalog NAPA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1893 None 2 12 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.10083.1 chr19 - 1618 12 novel_not_in_catalog NAPA novel NA NA NA NA no_subtype TRUE canonical NA NA 213 None 207 5 0 TRUE 0 0 NA B coding 295 885 116 1000 PB.1348.1 chr2 + 1239 1 full-splice_match EIF3FP3 ENST00000434851.1 1086 1 -11 -142 no_subtype FALSE canonical NA NA NA None 67 0 0 FALSE 0 0 NA A coding 361 1083 12 1094 PB.6585.1 chr11 - 1062 11 full-splice_match CHORDC1 ENST00000320585.10 2654 11 315 1277 no_subtype FALSE canonical NA NA 159 None 21 0 0 FALSE 0 0 NA C coding 322 966 96 1061 PB.729.10 chr1 - 2694 11 novel_in_catalog YY1AP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 51 None 2 6 1 FALSE 0 0 NA B coding 535 1605 887 2491 PB.6585.2 chr11 - 3079 12 novel_not_in_catalog CHORDC1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 188 None 16 20 1 TRUE 0 0 NA C coding 332 996 125 1120 PB.9544.1 chr18 + 2549 14 novel_in_catalog MOCOS novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2400 None 3 5 0 FALSE 0 0 NA C coding 848 2544 4 2547 PB.9816.3 chr19 + 3503 29 novel_not_in_catalog CC2D1A novel NA NA NA NA no_subtype FALSE canonical NA NA 3001 None 8 0 0 FALSE 0 0 NA B coding 950 2850 170 3019 PB.9544.2 chr18 + 2738 15 full-splice_match MOCOS ENST00000261326.5 6160 15 -21 3443 no_subtype FALSE canonical NA NA 2556 None 3 4 0 FALSE 0 0 NA C coding 888 2664 43 2706 PB.1267.3 chr2 + 2873 21 novel_in_catalog LTBP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2729 None 8 1 0 FALSE 0 0 NA B coding 912 2736 137 2872 PB.1267.2 chr2 + 2991 23 novel_not_in_catalog LTBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2847 None 11 1 0 TRUE 0 0 NA B coding 954 2862 129 2990 PB.2027.2 chr3 + 3224 3 novel_in_catalog CAPN7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 460 None 3 24 0 FALSE 0 0 NA C coding 131 393 250 642 PB.2027.3 chr3 + 3475 19 novel_in_catalog CAPN7 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2292 None 2 14 1 FALSE 0 0 NA C coding 474 1422 364 1785 PB.2027.4 chr3 + 2714 1 novel_in_catalog CAPN7 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 30 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2027.5 chr3 + 2781 3 full-splice_match CAPN7 ENST00000472400.1 501 3 -1279 -1001 no_subtype FALSE canonical NA NA 1593 None 2 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1267.4 chr2 + 2995 21 incomplete-splice_match LTBP1 ENST00000418533.6 5164 29 42 2127 3prime_fragment FALSE canonical NA NA 2851 None 3 0 0 FALSE 0 0 NA B coding 965 2895 100 2994 PB.921.8 chr1 - 3162 11 novel_not_in_catalog FAM129A novel NA NA NA NA no_subtype FALSE canonical NA NA 124 None 2 2 0 TRUE 0 0 NA B coding 726 2178 130 2307 PB.921.9 chr1 - 7593 6 novel_not_in_catalog FAM129A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1995 None 2 39 1 TRUE 0 0 NA B coding 163 489 1810 2298 PB.11185.1 chrX - 2672 7 full-splice_match TMEM185A ENST00000600449.7 2840 7 162 6 no_subtype FALSE canonical NA NA 208 None 7 10 1 FALSE 0 0 NA A coding 350 1050 171 1220 PB.2517.2 chr3 - 3195 9 novel_not_in_catalog PLSCR4 novel NA NA NA NA no_subtype FALSE canonical NA NA 113 None 10 20 1 FALSE 0 0 NA C coding 329 987 135 1121 PB.4194.2 chr6 - 3572 5 incomplete-splice_match LATS1 ENST00000253339.9 4256 7 1603 -919 5prime_fragment FALSE canonical NA NA 635 None 2 7 0 FALSE 0 0 NA A coding 630 1890 126 2015 PB.3350.2 chr5 + 4237 25 novel_not_in_catalog MSH3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3378 None 10 10 1 TRUE 0 0 NA B coding 1137 3411 77 3487 PB.4077.8 chr6 - 1806 1 incomplete-splice_match CD164 ENST00000324953.9 2936 5 1127 4 no_subtype FALSE canonical NA NA NA None 4 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3350.1 chr5 + 2619 18 incomplete-splice_match MSH3 ENST00000265081.6 4092 24 4 1469 3prime_fragment FALSE non_canonical NA NA 2511 None 11 2 0 FALSE 0 0 NA B coding 847 2541 77 2617 PB.8811.1 chr16 + 3041 18 novel_not_in_catalog SPG7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2849 None 106 8 1 TRUE 0 0 NA A coding 795 2385 24 2408 PB.4238.1 chr6 - 1477 2 genic_intron novelGene_1274 novel NA NA NA NA no_subtype FALSE canonical NA NA 1383 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3383.3 chr5 - 1414 1 novel_in_catalog TTC37 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2847.1 chr4 - 5721 30 full-splice_match KDR ENST00000263923.4 5831 30 -3 113 no_subtype FALSE canonical NA NA 366 None 17 7 0 FALSE 0 0 NA A coding 1356 4068 300 4367 PB.4077.1 chr6 - 1136 6 novel_not_in_catalog CD164 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 284 None 1107 3 1 TRUE 0 0 NA C coding 187 561 110 670 PB.7428.1 chr13 - 2063 6 full-splice_match N4BP2L2 ENST00000267068.5 9427 6 22 7342 no_subtype FALSE canonical NA NA 143 None 28 3 0 FALSE 0 0 NA A coding 583 1749 144 1892 PB.10870.2 chrX + 3194 4 novel_not_in_catalog TCEANC novel NA NA NA NA no_subtype FALSE canonical NA NA 298 None 2 16 0 FALSE 0 0 NA B coding 386 1158 202 1359 PB.2148.3 chr3 + 3612 1 genic CCR2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA B coding 421 1263 27 1289 PB.212.1 chr1 - 3107 1 incomplete-splice_match SDC3 ENST00000336798.11 6392 3 3285 1 no_subtype FALSE canonical NA NA NA None 9 10 0 FALSE 0 0 NA A coding 126 378 2295 2672 PB.3330.1 chr5 + 3709 16 novel_not_in_catalog POLK novel NA NA NA NA no_subtype TRUE canonical NA NA 2564 None 8 9 0 TRUE 0 0 NA B coding 870 2610 37 2646 PB.3330.2 chr5 + 2926 3 novel_not_in_catalog POLK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 649 None 14 17 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.3330.3 chr5 + 3536 13 novel_in_catalog POLK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2394 None 2 9 0 FALSE 0 0 NA B coding 804 2412 65 2476 PB.744.4 chr1 - 5888 20 novel_in_catalog SMG5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 202 None 2 21 1 FALSE 0 0 NA C coding 939 2817 129 2945 PB.10850.2 chrX - 3167 2 novel_not_in_catalog ZBED1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 139 None 85 14 0 FALSE 0 0 NA B coding 694 2082 193 2274 PB.4296.1 chr7 + 2832 1 genic_intron novelGene_57 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.880.1 chr1 + 1500 6 full-splice_match CACYBP ENST00000367679.6 2766 6 355 911 no_subtype FALSE canonical NA NA 623 None 58 8 0 FALSE 0 0 NA A coding 228 684 94 777 PB.10850.6 chrX - 3072 2 fusion ZBED1,DHRSX novel NA NA NA NA no_subtype FALSE canonical NA NA 59 None 4 15 0 FALSE 0 0 NA A coding 694 2082 113 2194 PB.10850.4 chrX - 2929 1 incomplete-splice_match ZBED1 ENST00000381222.7 4485 2 233 1324 no_subtype FALSE canonical NA NA NA None 7 12 0 FALSE 0 0 NA B coding 644 1932 120 2051 PB.3401.1 chr5 + 2692 3 full-splice_match C5orf30 ENST00000319933.6 3049 3 66 291 no_subtype FALSE canonical NA NA 219 None 14 11 0 FALSE 0 0 NA A coding 206 618 243 860 PB.1435.1 chr2 - 2839 15 novel_not_in_catalog LOXL3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 19 None 7 2 0 TRUE 0 0 NA A coding 753 2259 108 2366 PB.8083.2 chr15 + 2890 18 incomplete-splice_match AP4E1 ENST00000261842.9 6758 21 32 3836 3prime_fragment FALSE canonical NA NA 2420 None 2 6 0 FALSE 0 0 NA B coding 938 2814 75 2888 PB.4425.1 chr7 - 817 4 full-splice_match CHCHD2 ENST00000395422.3 901 4 76 8 no_subtype FALSE canonical NA NA 137 None 6 3 0 FALSE 0 0 NA A coding 140 420 121 540 PB.5653.1 chr10 - 3431 28 novel_not_in_catalog PITRM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 91 None 30 8 0 TRUE 0 0 NA A coding 1037 3111 36 3146 PB.3317.1 chr5 - 2627 11 full-splice_match MRPS27 ENST00000261413.9 2785 11 30 128 no_subtype FALSE canonical NA NA 83 None 64 11 0 FALSE 0 0 NA A coding 414 1242 11 1252 PB.763.2 chr1 - 1790 3 novel_not_in_catalog FCRL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 111 None 4 5 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.3641.2 chr5 - 3587 7 novel_not_in_catalog KCNMB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 21 14 2 TRUE 0 0 NA B coding 191 573 147 719 PB.8825.1 chr17 + 3162 4 full-splice_match TIMM22 ENST00000327158.4 3194 4 26 6 no_subtype FALSE canonical NA NA 508 None 9 26 0 FALSE 0 0 NA A coding 194 582 1 582 PB.3856.1 chr6 + 1245 2 novel_not_in_catalog CYCSP55 novel NA NA NA NA no_subtype FALSE canonical NA NA 349 None 10 4 1 FALSE 0 0 NA A coding 107 321 70 390 PB.9459.1 chr17 + 3892 40 novel_not_in_catalog TBCD novel NA NA NA NA no_subtype FALSE canonical NA NA 3642 None 15 2 0 TRUE 0 0 NA A coding 1192 3576 79 3654 PB.8817.3 chr16 - 3380 14 novel_not_in_catalog VPS9D1 novel NA NA NA NA no_subtype FALSE canonical NA NA 188 None 2 11 1 TRUE 0 0 NA A coding 387 1161 1492 2652 PB.2907.1 chr4 - 2928 15 novel_not_in_catalog RASGEF1B novel NA NA NA NA no_subtype TRUE canonical NA NA 138 None 44 21 1 TRUE 0 0 NA A coding 472 1416 145 1560 PB.1082.8 chr1 - 5614 3 novel_not_in_catalog TMEM63A novel NA NA NA NA no_subtype FALSE canonical NA NA 3415 None 9 29 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.9832.1 chr19 - 2908 17 novel_not_in_catalog ILVBL novel NA NA NA NA no_subtype FALSE canonical NA NA 106 None 2 2 0 TRUE 0 0 NA A coding 396 1188 117 1304 PB.4600.1 chr7 + 2883 9 novel_not_in_catalog BCAP29 novel NA NA NA NA no_subtype TRUE canonical NA NA 1587 None 8 10 2 TRUE 0 0 NA B coding 241 723 74 796 PB.1109.1 chr1 + 2633 18 full-splice_match COG2 ENST00000366669.8 2921 18 42 246 no_subtype FALSE canonical NA NA 2188 None 37 2 0 FALSE 0 0 NA A coding 738 2214 74 2287 PB.3383.1 chr5 - 5161 43 full-splice_match TTC37 ENST00000358746.6 5706 43 18 527 no_subtype TRUE canonical NA NA 54 None 13 5 0 FALSE 0 0 NA C coding 1564 4692 282 4973 PB.9288.1 chr17 + 6309 7 full-splice_match DCAF7 ENST00000614556.4 6340 7 26 5 no_subtype FALSE canonical NA NA 1047 None 2 28 0 FALSE 0 0 NA C coding 342 1026 192 1217 PB.7050.5 chr12 + 2950 15 novel_in_catalog LRP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2026 None 4 3 0 FALSE 0 0 NA B coding 691 2073 92 2164 PB.935.2 chr1 + 3231 1 novel_in_catalog RGS2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3661.1 chr5 - 3783 11 novel_in_catalog RNF44 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 126 None 4 16 1 FALSE 0 0 NA A coding 432 1296 171 1466 PB.7050.6 chr12 + 1946 12 full-splice_match SHMT2 ENST00000328923.7 2537 12 384 207 no_subtype FALSE canonical NA NA 1455 None 14 5 0 FALSE 0 0 NA A coding 504 1512 69 1580 PB.7050.1 chr12 + 2478 7 full-splice_match NAB2 ENST00000300131.7 2711 7 226 7 no_subtype FALSE canonical NA NA 1620 None 7 6 0 FALSE 0 0 NA A coding 525 1575 153 1727 PB.1277.1 chr2 + 1431 10 full-splice_match NDUFAF7 ENST00000002125.8 2176 10 3 742 no_subtype FALSE canonical NA NA 1147 None 6 1 0 FALSE 0 0 NA A coding 441 1323 38 1360 PB.7050.3 chr12 + 7011 46 incomplete-splice_match LRP1 ENST00000243077.7 14897 89 7861 25 internal_fragment FALSE canonical NA NA 6099 None 2 3 0 FALSE 0 0 NA B coding 1963 5889 349 6237 PB.8089.1 chr15 - 2589 13 novel_not_in_catalog GNB5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 127 None 3 19 1 TRUE 0 0 NA A coding 353 1059 16 1074 PB.7871.2 chr14 + 3379 4 genic_intron novelGene_848 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 136 None 3 16 2 FALSE 0 0 NA B coding 126 378 1393 1770 PB.3559.2 chr5 - 1579 6 full-splice_match YIPF5 ENST00000274496.9 3147 6 -2 1570 no_subtype FALSE canonical NA NA 127 None 18 2 0 FALSE 0 0 NA C coding 257 771 138 908 PB.3795.31 chr6 + 2575 3 novel_in_catalog BTN2A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 276 None 3 14 0 FALSE 0 0 NA C coding 209 627 195 821 PB.3795.30 chr6 + 4101 6 novel_in_catalog BTN2A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2410 None 2 12 0 FALSE 0 0 NA C coding 466 1398 1612 3009 PB.3795.33 chr6 + 3337 2 novel_in_catalog BTN2A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 164 None 2 18 0 FALSE 0 0 NA C coding 148 444 1140 1583 PB.3795.32 chr6 + 3738 9 novel_not_in_catalog BTN2A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1943 None 2 19 2 TRUE 0 0 NA C coding 529 1587 195 1781 PB.9113.5 chr17 - 5544 1 novel_in_catalog CCR7 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 23 0 FALSE 0 0 NA C coding 115 345 2765 3109 PB.9445.4 chr17 + 5823 18 novel_not_in_catalog ASPSCR1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5730 None 2 43 3 TRUE 0 0 NA B coding 480 1440 18 1457 PB.9113.1 chr17 - 3118 4 novel_not_in_catalog CCR7 novel NA NA NA NA no_subtype FALSE canonical NA NA 73 None 3 11 0 TRUE 0 0 NA C coding 378 1134 64 1197 PB.9113.3 chr17 - 1761 1 incomplete-splice_match CCR7 ENST00000246657.2 2173 3 368 45 no_subtype FALSE canonical NA NA NA None 6 5 0 FALSE 0 0 NA C coding 241 723 108 830 PB.9113.2 chr17 - 2128 3 full-splice_match CCR7 ENST00000246657.2 2173 3 0 45 no_subtype FALSE canonical NA NA 73 None 168 5 0 FALSE 0 0 NA C coding 378 1134 64 1197 PB.1666.1 chr2 + 1530 12 full-splice_match PSMD14 ENST00000409682.7 1954 12 422 2 no_subtype FALSE canonical NA NA 1116 None 36 1 0 FALSE 0 0 NA A coding 310 930 283 1212 PB.8253.1 chr15 + 1591 1 genic_intron novelGene_750 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1951.1 chr2 + 3303 2 genic_intron novelGene_1420 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 988 None 2 26 1 FALSE 0 0 NA A coding 101 303 279 581 PB.2581.2 chr3 - 3492 2 genic_intron novelGene_1308 novel NA NA NA NA no_subtype FALSE canonical NA NA 1197 None 5 23 1 FALSE 0 0 NA A coding 103 309 1796 2104 PB.6176.1 chr11 - 2871 2 genic RRP8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1558 None 2 22 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.2434.1 chr3 + 1529 8 full-splice_match SEC22A ENST00000473494.6 1011 8 -1 -517 no_subtype FALSE canonical NA NA 869 None 4 5 0 FALSE 0 0 NA A coding 307 921 147 1067 PB.10251.1 chr20 + 2161 7 full-splice_match SMOX ENST00000305958.8 2233 7 49 23 no_subtype FALSE canonical NA NA 1706 None 9 3 0 FALSE 0 0 NA A coding 555 1665 177 1841 PB.3415.2 chr5 + 6124 16 novel_in_catalog APC novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1941 None 2 10 0 FALSE 0 0 NA B coding 2022 6066 59 6124 PB.4698.1 chr7 - 4088 1 incomplete-splice_match CREB3L2 ENST00000616381.4 7133 13 2919 127 no_subtype FALSE canonical NA NA NA None 10 34 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4252.2 chr6 + 3300 4 novel_not_in_catalog CCR6 novel NA NA NA NA no_subtype FALSE canonical NA NA 409 None 5 19 0 FALSE 0 0 NA C coding 374 1122 401 1522 PB.2411.1 chr3 + 4003 28 novel_not_in_catalog STXBP5L novel NA NA NA NA no_subtype FALSE canonical NA NA 3588 None 2 6 0 TRUE 0 0 NA C coding 679 2037 141 2177 PB.3545.12 chr5 - 3447 1 novel_in_catalog DIAPH1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 27 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5960.6 chr10 - 2963 21 novel_not_in_catalog HPS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 4 10 2 TRUE 0 0 NA B coding 700 2100 328 2427 PB.7225.2 chr12 + 3636 3 novel_not_in_catalog FICD novel NA NA NA NA no_subtype FALSE canonical NA NA 828 None 2 32 0 FALSE 0 0 NA C coding 453 1359 543 1901 PB.7225.1 chr12 + 3237 3 full-splice_match FICD ENST00000552695.5 3347 3 103 7 no_subtype FALSE canonical NA NA 433 None 9 20 0 FALSE 0 0 NA C coding 453 1359 148 1506 PB.2362.1 chr3 - 2572 18 incomplete-splice_match KIAA1524 ENST00000295746.12 4075 21 -171 1674 internal_fragment TRUE canonical NA NA 350 None 2 4 0 FALSE 0 0 NA A coding 774 2322 249 2570 PB.5439.2 chr9 + 1689 5 full-splice_match DNAJC25 ENST00000447096.1 2498 5 -7 816 no_subtype FALSE canonical NA NA 1253 None 2 6 0 FALSE 0 0 NA C coding 135 405 56 460 PB.5412.2 chr9 - 4093 2 novel_not_in_catalog TMEM246 novel NA NA NA NA no_subtype FALSE canonical NA NA 101 None 2 12 0 FALSE 0 0 NA C coding 403 1209 179 1387 PB.3868.1 chr6 + 2921 10 novel_in_catalog DEF6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2344 None 3 8 0 FALSE 0 0 NA C coding 563 1689 877 2565 PB.3868.2 chr6 + 2260 11 full-splice_match DEF6 ENST00000316637.6 2262 11 -4 6 no_subtype FALSE canonical NA NA 1681 None 4 6 0 FALSE 0 0 NA C coding 631 1893 10 1902 PB.4008.1 chr6 - 2908 1 incomplete-splice_match FAM46A ENST00000369756.3 5537 3 2627 3 no_subtype FALSE canonical NA NA NA None 5 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.11198.1 chrX + 3132 7 novel_not_in_catalog SSR4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2976 None 2 19 2 TRUE 0 0 NA A coding 110 330 2749 3078 PB.5478.3 chr9 + 1672 12 novel_not_in_catalog CNTRL novel NA NA NA NA no_subtype FALSE canonical NA NA 1485 None 5 0 0 TRUE 0 0 NA B coding 436 1308 364 1671 PB.3307.2 chr5 + 2760 2 novel_not_in_catalog RAD17 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 537 None 5 17 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.9599.1 chr18 - 3388 16 full-splice_match TMX3 ENST00000299608.6 4927 16 239 1300 no_subtype FALSE canonical NA NA 124 None 28 14 0 FALSE 0 0 NA A coding 454 1362 79 1440 PB.3307.1 chr5 + 2930 18 novel_in_catalog RAD17 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2162 None 3 5 0 FALSE 0 0 NA B coding 670 2010 412 2421 PB.1882.2 chr2 + 3169 10 novel_not_in_catalog STK11IP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2767 None 2 12 1 TRUE 0 0 NA B coding 252 756 1461 2216 PB.1882.3 chr2 + 3569 25 novel_not_in_catalog STK11IP novel NA NA NA NA no_subtype FALSE canonical NA NA 3166 None 13 4 1 FALSE 0 0 NA B coding 1088 3264 50 3313 PB.6591.1 chr11 + 3354 12 full-splice_match MED17 ENST00000251871.7 4874 12 155 1365 no_subtype FALSE canonical NA NA 1876 None 6 16 0 FALSE 0 0 NA A coding 651 1953 133 2085 PB.5960.2 chr10 - 2791 20 novel_not_in_catalog HPS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 38 None 57 7 1 FALSE 0 0 NA B coding 700 2100 153 2252 PB.581.5 chr1 - 2939 7 full-splice_match RSBN1 ENST00000615321.1 2418 7 -3 -518 no_subtype FALSE canonical NA NA 583 None 5 2 0 FALSE 0 0 NA C coding 754 2262 25 2286 PB.5321.1 chr9 - 2691 6 full-splice_match ZFAND5 ENST00000376960.8 2686 6 -12 7 no_subtype FALSE canonical NA NA 552 None 3 7 0 FALSE 0 0 NA C coding 213 639 562 1200 PB.5321.2 chr9 - 2782 7 full-splice_match ZFAND5 ENST00000376962.9 2785 7 -8 11 no_subtype FALSE canonical NA NA 510 None 2 12 1 FALSE 0 0 NA C coding 213 639 657 1295 PB.6467.5 chr11 + 1573 2 full-splice_match RBM4 ENST00000483858.5 1548 2 -27 2 no_subtype FALSE canonical NA NA 82 None 3 8 0 FALSE 0 0 NA C coding 177 531 95 625 PB.331.1 chr1 + 2822 21 full-splice_match KIF2C ENST00000372224.8 2879 21 22 35 no_subtype FALSE canonical NA NA 2186 None 10 1 0 FALSE 0 0 NA A coding 723 2169 98 2266 PB.170.1 chr1 - 2689 3 genic_intron novelGene_258 novel NA NA NA NA no_subtype FALSE canonical NA NA 1866 None 2 20 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.7038.3 chr12 - 3130 10 novel_not_in_catalog CS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 168 None 2 29 2 TRUE 0 0 NA C coding 288 864 127 990 PB.7038.1 chr12 - 2828 12 novel_in_catalog CS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 27 None 4 10 1 FALSE 0 0 NA C coding 466 1398 47 1444 PB.10354.1 chr20 + 1655 1 full-splice_match RNU4-40P ENST00000364351.1 143 1 -1519 7 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A coding 105 315 597 911 PB.4061.1 chr6 - 3097 7 novel_not_in_catalog OSTM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 488 None 30 9 1 TRUE 0 0 NA C coding 334 1002 87 1088 PB.4061.2 chr6 - 2791 6 full-splice_match OSTM1 ENST00000193322.7 4467 6 20 1656 no_subtype FALSE canonical NA NA 468 None 14 8 0 FALSE 0 0 NA C coding 334 1002 67 1068 PB.8830.8 chr17 - 1756 2 novel_in_catalog SLC43A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 27 None 2 8 0 FALSE 0 0 NA C coding 90 270 74 343 PB.2128.2 chr3 - 2644 15 novel_not_in_catalog ANO10 novel NA NA NA NA no_subtype FALSE canonical NA NA 106 None 7 5 0 TRUE 0 0 NA B coding 660 1980 121 2100 PB.10777.1 chr22 + 5835 24 novel_in_catalog TNRC6B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5062 None 6 4 2 FALSE 0 0 NA C coding 1759 5277 171 5447 PB.10777.2 chr22 + 3401 3 novel_not_in_catalog TNRC6B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1149 None 2 26 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.10777.3 chr22 + 5931 25 novel_not_in_catalog TNRC6B novel NA NA NA NA no_subtype FALSE canonical NA NA 5156 None 2 9 1 TRUE 0 0 NA C coding 1734 5202 340 5541 PB.11065.1 chrX + 4322 10 full-splice_match ZNF711 ENST00000276123.7 2887 10 -1 -1434 no_subtype FALSE canonical NA NA 1617 None 2 7 0 FALSE 0 0 NA A coding 761 2283 510 2792 PB.8830.3 chr17 - 3030 14 full-splice_match SLC43A2 ENST00000301335.9 8136 14 -35 5141 no_subtype FALSE canonical NA NA 78 None 72 10 0 FALSE 0 0 NA C coding 569 1707 125 1831 PB.10777.6 chr22 + 5682 21 full-splice_match TNRC6B ENST00000335727.13 17933 21 -14 12265 no_subtype FALSE canonical NA NA 4992 None 26 4 0 FALSE 0 0 NA C coding 1723 5169 209 5377 PB.8830.1 chr17 - 3213 14 novel_in_catalog SLC43A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 261 None 17 11 0 FALSE 0 0 NA C coding 569 1707 308 2014 PB.7410.4 chr13 - 1649 3 novel_not_in_catalog CDX2 novel NA NA NA NA no_subtype FALSE canonical NA NA 272 None 2 6 0 FALSE 0 0 NA C coding 99 297 1103 1399 PB.6617.10 chr11 - 1332 11 fusion CARD16,CASP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 34 None 2 2 0 TRUE 0 0 NA B coding 404 1212 28 1239 PB.7410.1 chr13 - 3257 4 novel_not_in_catalog CDX2 novel NA NA NA NA no_subtype FALSE canonical NA NA 675 None 3 17 1 TRUE 0 0 NA C coding 313 939 135 1073 PB.7410.3 chr13 - 1873 3 full-splice_match CDX2 ENST00000381020.7 4053 3 1947 233 no_subtype FALSE canonical NA NA 727 None 26 4 0 FALSE 0 0 NA C coding 313 939 187 1125 PB.7410.2 chr13 - 3257 4 novel_not_in_catalog CDX2 novel NA NA NA NA no_subtype TRUE canonical NA NA 675 None 3 19 1 TRUE 0 0 NA C coding 313 939 135 1073 PB.8850.2 chr17 - 2783 14 novel_not_in_catalog NCBP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 209 None 6 5 0 TRUE 0 0 NA A coding 620 1860 27 1886 PB.5503.1 chr9 - 3821 22 incomplete-splice_match GOLGA1 ENST00000373555.8 4811 23 129 861 5prime_fragment FALSE canonical NA NA 50 None 2 16 0 FALSE 0 0 NA A coding 767 2301 206 2506 PB.10482.1 chr20 + 777 4 full-splice_match PPDPF ENST00000370179.7 868 4 45 46 no_subtype FALSE canonical NA NA 284 None 10 4 1 FALSE 0 0 NA A coding 114 342 152 493 PB.1859.14 chr2 + 2119 7 novel_in_catalog SLC11A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1122 None 2 12 0 FALSE 0 0 NA C coding 214 642 66 707 PB.8565.1 chr16 - 3037 3 full-splice_match ZNF629 ENST00000262525.5 6087 3 23 3027 no_subtype FALSE canonical NA NA 152 None 2 3 0 FALSE 0 0 NA A coding 869 2607 186 2792 PB.1215.1 chr2 - 3870 4 full-splice_match WDCP ENST00000295148.8 3817 4 -57 4 no_subtype FALSE canonical NA NA 97 None 4 9 0 FALSE 0 0 NA A coding 721 2163 116 2278 PB.2053.3 chr3 + 820 4 full-splice_match RPL15 ENST00000435882.5 1063 4 1 242 no_subtype FALSE canonical NA NA 466 None 12 0 0 FALSE 0 0 NA C coding 204 612 158 769 PB.2053.2 chr3 + 1983 4 full-splice_match RPL15 ENST00000307839.9 2730 4 604 143 no_subtype FALSE canonical NA NA 344 None 94 20 0 FALSE 0 0 NA C coding 204 612 36 647 PB.10668.1 chr22 + 2372 9 novel_in_catalog CABIN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1800 None 6 6 0 FALSE 0 0 NA B coding 645 1935 7 1941 PB.10668.3 chr22 + 2396 9 novel_in_catalog CABIN1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1822 None 15 10 1 FALSE 0 0 NA B coding 639 1917 47 1963 PB.2067.1 chr3 - 5501 2 genic_intron novelGene_292 novel NA NA NA NA no_subtype FALSE canonical NA NA 2308 None 3 32 1 FALSE 0 0 NA A coding 100 300 1372 1671 PB.2206.8 chr3 + 2815 2 novel_not_in_catalog GNAI2 novel NA NA NA NA no_subtype FALSE canonical NA NA 575 None 3 17 0 TRUE 0 0 NA C coding 121 363 1828 2190 PB.1859.17 chr2 + 2503 7 novel_in_catalog CTDSP1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 860 None 3 15 0 FALSE 0 0 NA B coding 260 780 207 986 PB.4381.9 chr7 - 1469 8 fusion TRGC1,TRGC2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 59 None 17 2 1 TRUE 0 0 NA B coding 197 591 20 610 PB.4381.8 chr7 - 1607 8 fusion TRGC1,TRGC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 195 None 3 3 1 TRUE 0 0 NA B coding 196 588 156 743 PB.4381.5 chr7 - 1502 8 fusion TRGC1,TRGC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 83 None 2 6 2 TRUE 0 0 NA B coding 195 585 44 628 PB.2206.3 chr3 + 1379 1 full-splice_match XXcos-LUCA16.1 ENST00000395152.3 367 1 -79 -933 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C coding 131 393 697 1089 PB.4381.6 chr7 - 1573 9 fusion TRGC1,TRGC2,TRGV9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 166 None 2 4 2 TRUE 0 0 NA B coding 143 429 704 1132 PB.4381.1 chr7 - 1812 8 fusion TRGC1,TRGV5,TRGV4,TRGC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 394 None 3 3 0 TRUE 0 0 NA A coding 143 429 936 1364 PB.10264.1 chr20 + 2466 5 full-splice_match CHGB ENST00000378961.8 2550 5 79 5 no_subtype FALSE canonical NA NA 2081 None 12 1 0 FALSE 0 0 NA C coding 677 2031 126 2156 PB.4381.3 chr7 - 1590 8 fusion TRGC1,TRGV7,TRGC2,TRGV8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 196 None 4 4 1 TRUE 0 0 NA B coding 330 990 154 1143 PB.4381.2 chr7 - 1487 8 fusion TRGC1,TRGC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 72 None 3 6 3 TRUE 0 0 NA B coding 193 579 33 611 PB.5076.1 chr8 + 3943 1 genic_intron novelGene_1037 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.458.1 chr1 - 3026 1 incomplete-splice_match DDAH1 ENST00000483110.5 3905 7 878 2 no_subtype FALSE canonical NA NA NA None 2 35 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8170.2 chr15 - 1418 10 full-splice_match RPL4 ENST00000307961.10 2769 10 37 1314 no_subtype FALSE canonical NA NA 59 None 272 0 0 FALSE 0 0 NA C coding 427 1281 57 1337 PB.8170.1 chr15 - 1557 11 novel_not_in_catalog RPL4 novel NA NA NA NA no_subtype FALSE canonical NA NA 59 None 2 4 1 TRUE 0 0 NA C coding 427 1281 57 1337 PB.458.2 chr1 - 3982 6 full-splice_match DDAH1 ENST00000284031.12 3920 6 -66 4 no_subtype FALSE canonical NA NA 464 None 19 15 0 FALSE 0 0 NA C coding 285 855 162 1016 PB.6241.2 chr11 + 2594 17 novel_not_in_catalog PRMT3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2309 None 7 10 1 TRUE 0 0 NA B coding 531 1593 154 1746 PB.9010.2 chr17 - 3597 14 novel_in_catalog PHF12 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 398 None 11 0 0 FALSE 0 0 NA A coding 986 2958 205 3162 PB.7959.225 chr14 - 1598 11 fusion IGHV3-52,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 113 None 2 11 4 TRUE 0 0 NA A coding 196 588 879 1466 PB.6241.1 chr11 + 2632 18 novel_not_in_catalog PRMT3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2607 None 2 9 2 TRUE 0 0 NA B coding 531 1593 174 1766 PB.7959.223 chr14 - 1558 10 fusion IGHV1-24,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 101 None 2 15 4 TRUE 0 0 NA B coding 196 588 838 1425 PB.7959.222 chr14 - 1516 10 fusion IGHG1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 20 3 TRUE 0 0 NA A coding 196 588 796 1383 PB.7959.221 chr14 - 1574 8 fusion IGHG1,IGHV3-7,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 2 15 3 TRUE 0 0 NA B coding 196 588 854 1441 PB.7959.220 chr14 - 1573 8 fusion IGHG1,IGHV3-23 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 124 None 2 13 3 TRUE 0 0 NA A coding 454 1362 79 1440 PB.4769.2 chr7 + 2810 1 genic_intron novelGene_1260 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1086.1 chr1 + 875 4 full-splice_match H3F3A ENST00000366815.7 1088 4 54 159 no_subtype FALSE canonical NA NA 385 None 16 2 0 FALSE 0 0 NA A coding 136 408 104 511 PB.1269.1 chr2 - 2725 8 full-splice_match FAM98A ENST00000238823.12 2816 8 84 7 no_subtype FALSE canonical NA NA 110 None 39 6 0 FALSE 0 0 NA C coding 518 1554 58 1611 PB.7682.3 chr14 - 1692 4 novel_not_in_catalog DNAAF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 712 None 7 8 1 TRUE 0 0 NA B coding 328 984 377 1360 PB.8097.1 chr15 - 1367 6 full-splice_match RSL24D1 ENST00000260443.8 2015 6 130 518 no_subtype TRUE canonical NA NA 128 None 39 12 0 FALSE 0 0 NA A coding 144 432 105 536 PB.1269.2 chr2 - 3514 3 full-splice_match FAM98A ENST00000464415.1 655 3 146 -3005 no_subtype FALSE canonical NA NA 68 None 2 11 0 FALSE 0 0 NA C coding 120 360 16 375 PB.622.2 chr1 - 1689 9 full-splice_match RNF115 ENST00000582693.4 9117 9 -166 7594 no_subtype FALSE canonical NA NA 472 None 26 3 0 FALSE 0 0 NA C coding 304 912 371 1282 PB.4913.1 chr8 + 3124 17 full-splice_match MCM4 ENST00000523944.5 4105 17 83 898 no_subtype FALSE canonical NA NA 2547 None 59 9 0 FALSE 0 0 NA C coding 863 2589 49 2637 PB.10636.1 chr22 + 2741 1 novel_in_catalog TANGO2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4822.3 chr8 - 3489 4 novel_in_catalog REEP4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1646 None 2 21 0 FALSE 0 0 NA C coding 105 315 2708 3022 PB.4822.2 chr8 - 1683 8 full-splice_match REEP4 ENST00000306306.7 1710 8 10 17 no_subtype FALSE canonical NA NA 491 None 18 7 0 FALSE 0 0 NA C coding 257 771 460 1230 PB.4822.1 chr8 - 1532 8 novel_not_in_catalog REEP4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 411 None 2 6 0 TRUE 0 0 NA C coding 224 672 392 1063 PB.4504.1 chr7 + 6215 21 novel_not_in_catalog ANKIB1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3051 None 2 19 0 TRUE 0 0 NA B coding 1089 3267 520 3786 PB.1108.4 chr1 + 4086 14 novel_not_in_catalog GALNT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1271 None 2 16 0 FALSE 0 0 NA B coding 367 1101 324 1424 PB.5048.2 chr8 - 775 1 incomplete-splice_match YWHAZ ENST00000353245.7 2829 6 1039 1016 no_subtype FALSE canonical NA NA NA None 10 2 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5048.3 chr8 - 3026 7 novel_in_catalog YWHAZ novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 109 None 11 11 0 FALSE 0 0 NA C coding 245 735 329 1063 PB.5048.8 chr8 - 2864 6 full-splice_match YWHAZ ENST00000395951.7 964 6 0 -1900 no_subtype FALSE canonical NA NA 152 None 4 11 0 FALSE 0 0 NA C coding 245 735 164 898 PB.2339.3 chr3 + 1828 9 novel_not_in_catalog TFG novel NA NA NA NA no_subtype FALSE canonical NA NA 1015 None 4 6 0 TRUE 0 0 NA C coding 275 825 198 1022 PB.3104.2 chr4 + 2525 9 novel_in_catalog GUCY1A3 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2138 None 3 4 0 FALSE 0 0 NA C coding 690 2070 268 2337 PB.6255.1 chr11 - 3097 1 antisense novelGene_EIF3M_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2897.1 chr4 + 1168 4 novel_in_catalog CXCL13 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 324 None 17 7 0 FALSE 0 0 NA A coding 109 327 47 373 PB.1575.3 chr2 - 2726 15 novel_not_in_catalog ERCC3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 48 None 2 7 1 TRUE 0 0 NA C coding 700 2100 21 2120 PB.1575.2 chr2 - 2811 17 novel_not_in_catalog ERCC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 86 None 2 11 2 TRUE 0 0 NA C coding 448 1344 59 1402 PB.1575.4 chr2 - 2765 16 novel_not_in_catalog ERCC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 48 None 2 6 0 FALSE 0 0 NA C coding 673 2019 21 2039 PB.9193.2 chr17 - 3106 19 full-splice_match CDC27 ENST00000527547.5 2579 19 -92 -435 no_subtype FALSE canonical NA NA 171 None 7 2 0 FALSE 0 0 NA A coding 823 2469 145 2613 PB.1009.1 chr1 + 2575 10 full-splice_match MAPKAPK2 ENST00000367103.3 2961 10 382 4 no_subtype FALSE canonical NA NA 870 None 3 8 0 FALSE 0 0 NA A coding 307 921 91 1011 PB.10432.24 chr20 - 5618 1 genic_intron novelGene_483 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 43 0 FALSE 0 0 NA A coding 134 402 2291 2692 PB.1009.2 chr1 + 1445 2 antisense novelGene_Y_RNA_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 19 None 18 6 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9322.1 chr17 + 1969 11 full-splice_match KPNA2 ENST00000330459.7 2181 11 216 -4 no_subtype FALSE canonical NA NA 1626 None 47 3 0 FALSE 0 0 NA A coding 529 1587 130 1716 PB.3111.1 chr4 + 2195 13 full-splice_match ETFDH ENST00000511912.5 3282 13 191 896 no_subtype FALSE canonical NA NA 1831 None 3 1 0 FALSE 0 0 NA A coding 617 1851 142 1992 PB.2649.1 chr3 - 2833 3 novel_not_in_catalog DGKG novel NA NA NA NA no_subtype TRUE canonical NA NA 43 None 2 13 0 TRUE 0 0 NA B coding 99 297 1810 2106 PB.2615.1 chr3 - 3193 6 full-splice_match LAMP3 ENST00000265598.7 3375 6 177 5 no_subtype FALSE canonical NA NA 128 None 29 19 0 FALSE 0 0 NA A coding 416 1248 80 1327 PB.1857.3 chr2 - 3234 8 novel_in_catalog TMBIM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 245 None 4 12 0 FALSE 0 0 NA C coding 127 381 1579 1959 PB.4566.4 chr7 + 2947 15 novel_not_in_catalog MUC12 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2614 None 2 11 5 TRUE 0 0 NA B coding 271 813 1744 2556 PB.11179.1 chrX + 1307 1 antisense novelGene_ATP11C_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4636.1 chr7 + 2737 1 genic_intron novelGene_1076 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5532.3 chr9 - 3537 10 incomplete-splice_match FAM102A ENST00000373095.5 4144 11 602 5 5prime_fragment FALSE canonical NA NA 41 None 2 22 0 FALSE 0 0 NA B coding 242 726 201 926 PB.5804.1 chr10 - 3807 25 full-splice_match HERC4 ENST00000373700.8 3905 25 96 2 no_subtype FALSE canonical NA NA 109 None 8 4 1 FALSE 0 0 NA C coding 1049 3147 218 3364 PB.4473.2 chr7 + 2514 11 novel_not_in_catalog DTX2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1891 None 6 3 0 TRUE 0 0 NA B coding 575 1725 392 2116 PB.470.3 chr1 - 1457 3 genic PTGES3P1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 537 None 4 6 0 FALSE 0 0 NA B coding 139 417 163 579 PB.5804.2 chr10 - 3808 26 novel_not_in_catalog HERC4 novel NA NA NA NA no_subtype FALSE canonical NA NA 86 None 2 7 2 TRUE 0 0 NA C coding 1056 3168 195 3362 PB.470.1 chr1 - 1504 2 genic PTGES3P1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1401 None 36 5 0 FALSE 0 0 NA B coding 160 480 148 627 PB.11142.1 chrX - 3819 31 incomplete-splice_match THOC2 ENST00000355725.8 4930 39 22 1089 internal_fragment FALSE canonical NA NA 83 None 28 5 1 FALSE 0 0 NA B coding 1269 3807 13 3819 PB.4543.1 chr7 - 2807 6 full-splice_match ZNF3 ENST00000299667.8 2799 6 -2 -6 no_subtype FALSE canonical NA NA 108 None 20 10 1 FALSE 0 0 NA A coding 446 1338 306 1643 PB.5040.1 chr8 + 5877 19 incomplete-splice_match VPS13B ENST00000357162.6 14019 62 8133 9 internal_fragment TRUE canonical NA NA 3723 None 2 27 0 FALSE 0 0 NA B coding 1183 3549 421 3969 PB.5040.2 chr8 + 6357 8 novel_in_catalog VPS13B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1145 None 3 22 0 FALSE 0 0 NA B coding 558 1674 292 1965 PB.5040.3 chr8 + 3083 4 novel_in_catalog VPS13B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 922 None 2 30 0 FALSE 0 0 NA B coding 303 909 260 1168 PB.8087.1 chr15 + 4078 6 full-splice_match MAPK6 ENST00000261845.6 5345 6 37 1230 no_subtype FALSE canonical NA NA 1837 None 44 9 0 FALSE 0 0 NA C coding 721 2163 771 2933 PB.8087.2 chr15 + 4147 6 novel_not_in_catalog MAPK6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1801 None 3 13 1 FALSE 0 0 NA C coding 721 2163 735 2897 PB.8087.3 chr15 + 3187 5 incomplete-splice_match MAPK6 ENST00000261845.6 5345 6 1041 1117 internal_fragment FALSE canonical NA NA 833 None 7 8 0 FALSE 0 0 NA C coding 611 1833 97 1929 PB.3597.2 chr5 - 2829 1 novel_in_catalog FAM114A2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 9 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9916.1 chr19 - 4577 31 novel_not_in_catalog ANKRD27 novel NA NA NA NA no_subtype FALSE canonical NA NA 96 None 4 12 0 TRUE 0 0 NA B coding 1050 3150 288 3437 PB.9916.2 chr19 - 4381 30 novel_not_in_catalog ANKRD27 novel NA NA NA NA no_subtype FALSE canonical NA NA 62 None 14 12 0 TRUE 0 0 NA B coding 1050 3150 93 3242 PB.8423.1 chr16 - 1232 8 full-splice_match EEF2KMT ENST00000427587.8 2390 8 60 1098 no_subtype FALSE canonical NA NA 105 None 5 1 0 FALSE 0 0 NA A coding 330 990 10 999 PB.4973.1 chr8 + 3097 2 antisense novelGene_UBE2W_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 594 None 3 25 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1404.1 chr2 + 1871 6 full-splice_match PCYOX1 ENST00000433351.6 5345 6 19 3455 no_subtype FALSE canonical NA NA 868 None 129 2 0 FALSE 0 0 NA C coding 505 1515 10 1524 PB.5507.2 chr9 - 2233 8 full-splice_match HSPA5 ENST00000324460.6 3908 8 -13 1688 no_subtype FALSE canonical NA NA 339 None 365 2 0 FALSE 0 0 NA C coding 654 1962 218 2179 PB.5060.4 chr8 + 1541 1 incomplete-splice_match OXR1 ENST00000312046.10 4406 14 2860 6 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5060.2 chr8 + 3535 14 full-splice_match OXR1 ENST00000312046.10 4406 14 38 833 no_subtype FALSE canonical NA NA 2479 None 4 7 0 FALSE 0 0 NA C coding 839 2517 96 2612 PB.5060.3 chr8 + 1466 1 novel_in_catalog OXR1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4525.1 chr7 + 3213 2 full-splice_match BHLHA15 ENST00000609256.1 796 2 41 -2458 no_subtype FALSE canonical NA NA 31 None 5 16 0 FALSE 0 0 NA A coding 189 567 86 652 PB.5060.1 chr8 + 3633 15 novel_in_catalog OXR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2579 None 2 7 0 FALSE 0 0 NA C coding 866 2598 115 2712 PB.3234.1 chr5 - 3422 1 novel_in_catalog CCL28 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7391.1 chr13 - 3371 12 novel_in_catalog ZDHHC20 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 198 None 3 25 0 FALSE 0 0 NA A coding 355 1065 81 1145 PB.1132.1 chr1 - 3569 8 incomplete-splice_match LYST ENST00000465349.5 5220 12 1451 200 internal_fragment FALSE canonical NA NA 1463 None 3 0 0 FALSE 0 0 NA B coding 1164 3492 76 3567 PB.7056.4 chr12 + 2778 22 novel_not_in_catalog MARS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2568 None 3 4 2 TRUE 0 0 NA C coding 826 2478 26 2503 PB.5901.4 chr10 + 1429 1 incomplete-splice_match IFIT2 ENST00000611722.1 3038 3 1602 8 no_subtype FALSE canonical NA NA NA None 14 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.11030.2 chrX - 2933 9 novel_in_catalog HDAC8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 193 None 2 2 0 FALSE 0 0 NA C coding 350 1050 83 1132 PB.4009.2 chr6 - 3033 1 novel_in_catalog FAM46A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA C coding 252 756 2228 2983 PB.8967.1 chr17 - 2463 1 full-splice_match FOXO3B ENST00000395675.4 1928 1 453 -988 no_subtype FALSE canonical NA NA NA None 11 7 0 FALSE 0 0 NA A coding 287 861 654 1514 PB.4009.1 chr6 - 1663 3 full-splice_match FAM46A ENST00000320172.10 5609 3 28 3918 no_subtype FALSE canonical NA NA 250 None 11 2 0 FALSE 0 0 NA C coding 433 1299 315 1613 PB.3782.3 chr6 - 1493 3 incomplete-splice_match C6orf62 ENST00000378102.3 741 5 405 -1157 5prime_fragment FALSE canonical NA NA 34 None 3 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3782.2 chr6 - 2903 5 full-splice_match C6orf62 ENST00000378119.8 4134 5 1153 78 no_subtype FALSE canonical NA NA 1144 None 20 18 0 FALSE 0 0 NA C coding 229 687 1016 1702 PB.497.3 chr1 - 2494 8 novel_not_in_catalog DNTTIP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 111 None 2 15 1 FALSE 0 0 NA C coding 551 1653 771 2423 PB.989.1 chr1 - 2975 1 full-splice_match LRRN2 ENST00000367175.1 5036 1 2024 37 no_subtype FALSE canonical NA NA NA None 4 3 0 FALSE 0 0 NA A coding 713 2139 190 2328 PB.4054.1 chr6 + 2015 11 full-splice_match QRSL1 ENST00000369046.8 4106 11 32 2059 no_subtype FALSE canonical NA NA 1438 None 9 3 0 FALSE 0 0 NA A coding 528 1584 73 1656 PB.894.1 chr1 + 2555 14 novel_not_in_catalog TOR1AIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2310 None 20 11 1 TRUE 0 0 NA B coding 478 1434 43 1476 PB.10610.5 chr21 - 6264 29 full-splice_match MCM3AP ENST00000397708.1 6333 29 63 6 no_subtype FALSE canonical NA NA 84 None 5 4 0 FALSE 0 0 NA C coding 1980 5940 193 6132 PB.894.3 chr1 + 2568 13 novel_not_in_catalog TOR1AIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2323 None 31 11 1 TRUE 0 0 NA B coding 478 1434 56 1489 PB.5183.1 chr8 + 2151 4 novel_in_catalog LRRC14 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1015 None 3 10 0 FALSE 0 0 NA A coding 493 1479 102 1580 PB.894.5 chr1 + 2559 13 novel_not_in_catalog TOR1AIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2347 None 3 13 0 TRUE 0 0 NA B coding 478 1434 54 1487 PB.894.4 chr1 + 3168 16 novel_not_in_catalog TOR1AIP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3112 None 2 14 2 TRUE 0 0 NA B coding 599 1797 219 2015 PB.10610.3 chr21 - 6691 30 novel_not_in_catalog MCM3AP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 445 None 2 49 4 TRUE 0 0 NA C coding 1715 5145 627 5771 PB.4126.6 chr6 - 1835 9 novel_in_catalog MED23 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 172 None 2 7 0 FALSE 0 0 NA C coding 263 789 134 922 PB.894.8 chr1 + 1608 12 novel_not_in_catalog TOR1AIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 674 None 2 2 0 TRUE 0 0 NA B coding 478 1434 23 1456 PB.4126.4 chr6 - 1586 11 novel_not_in_catalog MED23 novel NA NA NA NA no_subtype FALSE canonical NA NA 218 None 2 2 0 TRUE 0 0 NA C coding 338 1014 180 1193 PB.3105.1 chr4 + 3069 14 full-splice_match GUCY1B3 ENST00000264424.12 3124 14 52 3 no_subtype FALSE canonical NA NA 1866 None 77 6 0 FALSE 0 0 NA A coding 619 1857 31 1887 PB.4126.2 chr6 - 5192 29 full-splice_match MED23 ENST00000368068.7 5233 29 12 29 no_subtype FALSE canonical NA NA 207 None 7 13 0 FALSE 0 0 NA C coding 1368 4104 169 4272 PB.4126.3 chr6 - 1695 12 novel_not_in_catalog MED23 novel NA NA NA NA no_subtype FALSE canonical NA NA 225 None 6 3 0 TRUE 0 0 NA C coding 372 1116 187 1302 PB.2382.2 chr3 - 2421 5 full-splice_match NAA50 ENST00000240922.7 6135 5 33 3681 no_subtype FALSE canonical NA NA 300 None 117 7 0 FALSE 0 0 NA C coding 169 507 293 799 PB.937.2 chr1 - 1690 11 full-splice_match UCHL5 ENST00000367455.8 5327 11 122 3515 no_subtype FALSE canonical NA NA 190 None 39 2 1 FALSE 0 0 NA C coding 329 987 115 1101 PB.4964.1 chr8 + 1774 1 genic_intron novelGene_659 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2914.7 chr4 - 3838 24 novel_not_in_catalog SEC31A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 18 None 2 24 1 TRUE 0 0 NA C coding 1106 3318 108 3425 PB.9814.1 chr19 + 1683 6 full-splice_match MRI1 ENST00000040663.7 1735 6 11 41 no_subtype FALSE canonical NA NA 978 None 4 1 0 FALSE 0 0 NA C coding 369 1107 30 1136 PB.4229.1 chr6 + 3686 2 antisense novelGene_RSPH3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2374 None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8559.1 chr16 + 5149 33 novel_not_in_catalog ITGAL novel NA NA NA NA no_subtype TRUE canonical NA NA 3458 None 16 10 0 TRUE 0 0 NA B coding 1169 3507 123 3629 PB.6778.1 chr12 + 2905 17 novel_not_in_catalog PLEKHG6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2542 None 26 4 2 TRUE 0 0 NA B coding 719 2157 393 2549 PB.6972.1 chr12 + 2635 2 full-splice_match METTL7A ENST00000332160.4 3390 2 -53 808 no_subtype FALSE canonical NA NA 839 None 4 17 0 FALSE 0 0 NA A coding 244 732 342 1073 PB.2401.1 chr3 + 1344 7 full-splice_match TIMMDC1 ENST00000494664.5 2394 7 13 1037 no_subtype FALSE canonical NA NA 896 None 10 3 0 FALSE 0 0 NA A coding 285 855 190 1044 PB.4816.4 chr8 - 4070 2 full-splice_match DOK2 ENST00000522011.1 501 2 -2615 -954 no_subtype FALSE canonical NA NA 3018 None 2 16 0 FALSE 0 0 NA C coding 258 774 2863 3636 PB.4816.5 chr8 - 1967 3 novel_not_in_catalog DOK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1462 None 2 8 0 TRUE 0 0 NA C coding 111 333 710 1042 PB.4816.2 chr8 - 1744 5 full-splice_match DOK2 ENST00000276420.8 1936 5 185 7 no_subtype FALSE canonical NA NA 137 None 39 4 0 FALSE 0 0 NA C coding 412 1236 75 1310 PB.4816.3 chr8 - 1671 4 full-splice_match DOK2 ENST00000517422.5 936 4 0 -735 no_subtype FALSE canonical NA NA 152 None 28 1 0 FALSE 0 0 NA C coding 258 774 464 1237 PB.2514.1 chr3 + 3449 3 full-splice_match C3orf58 ENST00000315691.7 4346 3 899 -2 no_subtype FALSE canonical NA NA 597 None 19 8 0 FALSE 0 0 NA A coding 290 870 57 926 PB.3020.1 chr4 + 2780 1 incomplete-splice_match SYNPO2 ENST00000448416.6 4298 3 1517 2 no_subtype FALSE canonical NA NA NA None 75 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2914.6 chr4 - 3892 26 full-splice_match SEC31A ENST00000311785.11 3909 26 15 2 no_subtype FALSE canonical NA NA 157 None 14 6 0 FALSE 0 0 NA C coding 1106 3318 162 3479 PB.10113.1 chr19 - 1706 11 full-splice_match FUZ ENST00000313777.8 1675 11 -28 -3 no_subtype FALSE canonical NA NA 303 None 2 6 0 FALSE 0 0 NA A coding 418 1254 193 1446 PB.3020.2 chr4 + 3745 2 genic SYNPO2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3429 None 4 24 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.10229.1 chr20 + 3782 10 novel_not_in_catalog SIRPA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3067 None 37 18 0 TRUE 0 0 NA C coding 504 1512 30 1541 PB.10229.2 chr20 + 2452 9 full-splice_match SIRPA ENST00000400068.7 4201 9 321 1428 no_subtype FALSE canonical NA NA 1305 None 2 10 0 FALSE 0 0 NA C coding 504 1512 40 1551 PB.10229.3 chr20 + 3164 7 novel_not_in_catalog SIRPA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2446 None 2 15 0 TRUE 0 0 NA C coding 287 861 60 920 PB.10229.4 chr20 + 3767 9 novel_not_in_catalog SIRPA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3052 None 11 14 0 TRUE 0 0 NA C coding 504 1512 15 1526 PB.8977.1 chr17 + 3067 17 full-splice_match SLC47A1 ENST00000270570.8 3280 17 80 133 no_subtype TRUE canonical NA NA 1492 None 9 9 0 FALSE 0 0 NA A coding 570 1710 7 1716 PB.6438.3 chr11 + 3136 16 novel_in_catalog SCYL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2872 None 2 7 0 FALSE 0 0 NA B coding 604 1812 1183 2994 PB.9678.2 chr19 - 2175 9 novel_in_catalog DAPK3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 73 None 2 10 0 FALSE 0 0 NA B coding 454 1362 168 1529 PB.9678.1 chr19 - 2160 10 novel_not_in_catalog DAPK3 novel NA NA NA NA no_subtype FALSE canonical NA NA 74 None 8 9 1 TRUE 0 0 NA B coding 454 1362 169 1530 PB.5532.4 chr9 - 3856 13 novel_not_in_catalog FAM102A novel NA NA NA NA no_subtype TRUE canonical NA NA 542 None 21 14 0 TRUE 0 0 NA B coding 384 1152 397 1548 PB.2664.2 chr3 + 3133 9 genic LPP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3075 None 4 23 3 TRUE 0 0 NA B non_coding NA NA NA NA PB.4633.1 chr7 - 1468 5 full-splice_match NDUFA5 ENST00000355749.6 1901 5 425 8 no_subtype FALSE canonical NA NA 56 None 34 9 0 FALSE 0 0 NA A coding 116 348 36 383 PB.7129.1 chr12 + 2985 1 genic_intron novelGene_715 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5803.3 chr10 - 6207 15 novel_in_catalog JMJD1C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 552 None 4 3 0 FALSE 0 0 NA B coding 1812 5436 771 6206 PB.10321.1 chr20 + 3194 1 genic_intron novelGene_318 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 31 0 FALSE 0 0 NA A coding 123 369 510 878 PB.6352.1 chr11 + 1091 7 novel_not_in_catalog MS4A12 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 693 None 3 9 2 TRUE 0 0 NA C coding 246 738 58 795 PB.1482.1 chr2 - 1465 1 genic AC021188.4 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8953.2 chr17 - 3550 1 novel_in_catalog TOM1L2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10249.3 chr20 - 1536 6 full-splice_match RNF24 ENST00000358395.10 3242 6 37 1669 no_subtype FALSE canonical NA NA 109 None 7 4 0 FALSE 0 0 NA C coding 148 444 117 560 PB.8953.1 chr17 - 5698 17 novel_not_in_catalog TOM1L2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 169 None 6 21 0 TRUE 0 0 NA B coding 507 1521 118 1638 PB.3788.1 chr6 - 1593 1 genic_intron novelGene_244 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10034.1 chr19 - 926 7 full-splice_match ETHE1 ENST00000292147.6 963 7 30 7 no_subtype FALSE canonical NA NA 118 None 5 2 0 FALSE 0 0 NA A coding 254 762 38 799 PB.8739.1 chr16 + 3380 3 antisense novelGene_GLG1_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 1420 None 2 23 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.184.3 chr1 + 1628 8 novel_not_in_catalog TMEM222 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 608 None 5 23 3 TRUE 0 0 NA B coding 124 372 322 693 PB.184.1 chr1 + 1492 6 novel_not_in_catalog TMEM222 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 473 None 26 12 2 TRUE 0 0 NA B coding 175 525 34 558 PB.769.1 chr1 + 2642 8 novel_not_in_catalog MNDA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2334 None 2 13 1 TRUE 0 0 NA C coding 173 519 1861 2379 PB.2126.1 chr3 - 2537 2 full-splice_match POMGNT2 ENST00000344697.2 2544 2 2 5 no_subtype FALSE canonical NA NA 239 None 10 7 0 FALSE 0 0 NA C coding 580 1740 345 2084 PB.2126.2 chr3 - 2745 3 novel_not_in_catalog POMGNT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 242 None 4 13 0 FALSE 0 0 NA C coding 580 1740 550 2289 PB.1141.1 chr1 - 1653 2 full-splice_match GREM2 ENST00000318160.4 4170 2 -6 2523 no_subtype FALSE canonical NA NA 272 None 23 5 0 FALSE 0 0 NA A coding 168 504 274 777 PB.4917.2 chr8 - 3361 4 novel_not_in_catalog RB1CC1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 991 None 2 19 1 TRUE 0 0 NA C coding 106 318 916 1233 PB.4917.3 chr8 - 4460 16 incomplete-splice_match RB1CC1 ENST00000435644.6 6614 24 -23 2177 internal_fragment FALSE canonical NA NA 372 None 2 0 0 FALSE 0 0 NA C coding 1307 3921 539 4459 PB.6190.1 chr11 - 3371 18 incomplete-splice_match DENND5A ENST00000328194.7 5031 23 1650 10 5prime_fragment FALSE canonical NA NA 126 None 3 2 0 FALSE 0 0 NA A coding 761 2283 250 2532 PB.4917.1 chr8 - 6200 24 full-splice_match RB1CC1 ENST00000025008.9 6635 24 -3 438 no_subtype FALSE canonical NA NA 361 None 2 16 0 FALSE 0 0 NA C coding 1594 4782 528 5309 PB.7559.1 chr13 - 1492 4 novel_not_in_catalog GGACT novel NA NA NA NA no_subtype FALSE canonical NA NA 30 None 2 11 2 FALSE 0 0 NA A coding 153 459 482 940 PB.7296.4 chr12 - 3044 21 novel_not_in_catalog TAOK3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 173 None 24 4 1 TRUE 0 0 NA B coding 898 2694 334 3027 PB.4917.4 chr8 - 3091 15 incomplete-splice_match RB1CC1 ENST00000435644.6 6614 24 -12 3535 internal_fragment FALSE canonical NA NA 361 None 8 0 0 FALSE 0 0 NA C coding 854 2562 528 3089 PB.2357.1 chr3 - 2656 1 novel_in_catalog CD47 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5409.1 chr9 - 3066 15 full-splice_match TEX10 ENST00000374902.8 3074 15 0 8 no_subtype FALSE canonical NA NA 168 None 19 5 0 FALSE 0 0 NA A coding 929 2787 178 2964 PB.2774.2 chr4 - 1935 5 novel_in_catalog SEPSECS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 169 None 2 10 0 FALSE 0 0 NA C coding 234 702 56 757 PB.2774.1 chr4 - 5451 11 full-splice_match SEPSECS ENST00000382103.6 5496 11 48 -3 no_subtype FALSE canonical NA NA 139 None 2 24 0 FALSE 0 0 NA C coding 501 1503 26 1528 PB.5901.9 chr10 + 1620 2 antisense novelGene_LIPA_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 578 None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8231.1 chr15 - 1656 7 full-splice_match TSPAN3 ENST00000267970.8 6467 7 182 4629 no_subtype FALSE canonical NA NA 155 None 220 1 0 FALSE 0 0 NA C coding 253 759 93 851 PB.5718.1 chr10 - 2525 19 full-splice_match YME1L1 ENST00000376016.7 3856 19 41 1290 no_subtype FALSE canonical NA NA 174 None 174 1 0 FALSE 0 0 NA A coding 716 2148 142 2289 PB.8231.3 chr15 - 3442 5 novel_in_catalog TSPAN3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 230 None 2 14 0 FALSE 0 0 NA C coding 96 288 168 455 PB.6824.2 chr12 - 2195 7 novel_not_in_catalog CLEC7A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 194 None 3 10 0 TRUE 0 0 NA B coding 247 741 92 832 PB.9751.1 chr19 - 5192 41 novel_not_in_catalog DNMT1 novel NA NA NA NA no_subtype TRUE canonical NA NA 102 None 8 10 1 TRUE 0 0 NA A coding 1616 4848 23 4870 PB.3636.16 chr5 + 5593 1 genic_intron novelGene_1302 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 45 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2629.2 chr3 + 5383 33 novel_in_catalog EIF4G1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4764 None 41 8 0 FALSE 0 0 NA B coding 1560 4680 264 4943 PB.589.1 chr1 - 1093 7 full-splice_match BCAS2 ENST00000369541.3 1299 7 24 182 no_subtype FALSE canonical NA NA 117 None 2 7 0 FALSE 0 0 NA C coding 225 675 25 699 PB.3636.13 chr5 + 2705 1 genic_intron novelGene_1299 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2629.5 chr3 + 3007 19 novel_in_catalog EIF4G1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2983 None 4 6 1 FALSE 0 0 NA B coding 921 2763 245 3007 PB.3636.11 chr5 + 3309 26 novel_in_catalog DOCK2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2728 None 2 0 0 FALSE 0 0 NA B coding 919 2757 32 2788 PB.6762.1 chr12 + 2168 10 full-splice_match FKBP4 ENST00000001008.5 3732 10 72 1492 no_subtype FALSE canonical NA NA 1387 None 6 5 0 FALSE 0 0 NA A coding 459 1377 116 1492 PB.1892.1 chr2 + 2972 2 antisense novelGene_DOCK10_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2054 None 2 24 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8662.1 chr16 + 3858 2 novel_in_catalog PDP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 138 None 15 11 0 FALSE 0 0 NA A coding 529 1587 193 1779 PB.6947.1 chr12 - 2097 17 full-splice_match LMBR1L ENST00000267102.12 2934 17 226 611 no_subtype FALSE canonical NA NA 189 None 6 5 1 FALSE 0 0 NA A coding 489 1467 118 1584 PB.178.1 chr1 + 1314 9 full-splice_match NUDC ENST00000321265.9 1800 9 20 466 no_subtype FALSE canonical NA NA 1047 None 45 2 0 FALSE 0 0 NA A coding 331 993 104 1096 PB.9070.1 chr17 - 3103 2 antisense novelGene_TAF15_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 177 None 9 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4344.4 chr7 - 3125 3 genic_intron novelGene_275 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 92 None 4 18 1 FALSE 0 0 NA A coding 101 303 1829 2131 PB.4376.13 chr7 - 3152 1 genic_intron novelGene_357 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A coding 115 345 1046 1390 PB.6623.2 chr11 - 3234 18 full-splice_match CWF19L2 ENST00000282251.9 3278 18 19 25 no_subtype FALSE canonical NA NA 114 None 8 5 0 FALSE 0 0 NA A coding 890 2670 22 2691 PB.4413.1 chr7 - 1842 4 incomplete-splice_match IGFBP3 ENST00000381086.9 2322 6 366 114 5prime_fragment FALSE canonical NA NA 105 None 2 4 0 FALSE 0 0 NA A coding 75 225 124 348 PB.6703.7 chr11 + 6491 49 novel_not_in_catalog SORL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 6309 None 9 0 0 TRUE 0 0 NA B coding 1972 5916 459 6374 PB.6623.1 chr11 + 2865 3 antisense novelGene_CWF19L2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2601 None 3 24 0 FALSE 0 0 NA B coding 175 525 1379 1903 PB.4907.1 chr8 + 1978 5 novel_not_in_catalog POMK novel NA NA NA NA no_subtype FALSE canonical NA NA 1244 None 2 9 2 TRUE 0 0 NA B coding 350 1050 171 1220 PB.4623.1 chr7 + 2733 7 full-splice_match TES ENST00000358204.8 2782 7 46 3 no_subtype FALSE canonical NA NA 1246 None 5 13 0 FALSE 0 0 NA C coding 421 1263 170 1432 PB.4907.2 chr8 + 2063 6 novel_not_in_catalog POMK novel NA NA NA NA no_subtype FALSE canonical NA NA 1324 None 2 6 2 TRUE 0 0 NA B coding 350 1050 251 1300 PB.2382.3 chr3 - 2772 1 incomplete-splice_match NAA50 ENST00000616174.1 3257 3 485 1 no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5899.2 chr10 + 2439 8 full-splice_match FAS ENST00000357339.6 1044 8 22 -1417 no_subtype FALSE canonical NA NA 690 None 4 10 2 FALSE 0 0 NA C coding 314 942 78 1019 PB.2992.1 chr4 - 4010 2 genic_intron novelGene_959 novel NA NA NA NA no_subtype FALSE canonical NA NA 3268 None 2 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5899.1 chr10 + 1670 9 novel_not_in_catalog FAS novel NA NA NA NA no_subtype FALSE canonical NA NA 689 None 32 5 2 TRUE 0 0 NA C coding 206 618 25 642 PB.11223.1 chrX + 1571 7 novel_not_in_catalog VBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 532 None 14 5 0 TRUE 0 0 NA A coding 197 591 10 600 PB.9686.1 chr19 - 2458 10 full-splice_match SH3GL1 ENST00000269886.7 2516 10 55 3 no_subtype FALSE canonical NA NA 169 None 6 11 0 FALSE 0 0 NA A coding 368 1104 125 1228 PB.8180.1 chr15 - 3490 1 novel_in_catalog RP11-315D16.2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 32 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11085.2 chrX - 1838 3 full-splice_match ARMCX6 ENST00000361910.8 1846 3 1 7 no_subtype FALSE canonical NA NA 116 None 2 1 0 FALSE 0 0 NA C coding 300 900 345 1244 PB.4116.3 chr6 + 2827 1 novel_in_catalog RNF146 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 12 0 FALSE 0 0 NA C coding 358 1074 1088 2161 PB.4116.2 chr6 + 2149 4 novel_in_catalog RNF146 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 410 None 2 5 0 FALSE 0 0 NA C coding 358 1074 412 1485 PB.4116.1 chr6 + 2065 3 full-splice_match RNF146 ENST00000610153.1 2070 3 0 5 no_subtype FALSE canonical NA NA 323 None 10 4 0 FALSE 0 0 NA C coding 358 1074 325 1398 PB.6539.4 chr11 + 1661 3 genic_intron novelGene_711 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 305 None 3 11 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6539.5 chr11 + 3364 2 genic_intron novelGene_712 novel NA NA NA NA no_subtype FALSE canonical NA NA 24 None 5 20 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6539.6 chr11 + 1523 3 genic_intron novelGene_713 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1256 None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10155.1 chr19 + 3935 6 incomplete-splice_match ZNF528 ENST00000360465.7 3978 7 37 6 internal_fragment FALSE canonical NA NA 660 None 8 15 0 FALSE 0 0 NA A coding 628 1884 390 2273 PB.7823.1 chr14 + 2093 4 full-splice_match FOS ENST00000303562.8 2158 4 57 8 no_subtype FALSE canonical NA NA 653 None 32 2 0 FALSE 0 0 NA C coding 380 1140 153 1292 PB.4352.1 chr7 + 2094 1 antisense novelGene_NOD1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8126.2 chr15 + 2800 1 genic_intron novelGene_576 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4600.2 chr7 + 5702 10 novel_not_in_catalog BCAP29 novel NA NA NA NA no_subtype FALSE canonical NA NA 3535 None 3 37 4 TRUE 0 0 NA B coding 241 723 71 793 PB.755.6 chr1 - 3198 27 novel_not_in_catalog ARHGEF11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 33 None 2 7 3 TRUE 0 0 NA B coding 960 2880 318 3197 PB.1754.1 chr2 - 2718 2 genic_intron novelGene_1357 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1283 None 2 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3012.1 chr4 + 3559 5 full-splice_match UGT8 ENST00000394511.3 2448 5 510 -1621 no_subtype FALSE canonical NA NA 1266 None 2 11 0 FALSE 0 0 NA A coding 541 1623 5 1627 PB.9217.1 chr17 - 2853 1 novel_in_catalog ZNF652 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1089.1 chr1 - 1939 2 genic_intron novelGene_1406 novel NA NA NA NA no_subtype FALSE canonical NA NA 1080 None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11085.1 chrX - 1845 4 novel_not_in_catalog ARMCX6 novel NA NA NA NA no_subtype FALSE canonical NA NA 43 None 4 2 0 FALSE 0 0 NA C coding 300 900 354 1253 PB.8126.1 chr15 + 2884 1 novel_in_catalog RORA-AS1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1075.1 chr1 - 2547 1 incomplete-splice_match WDR26 ENST00000414423.6 6872 14 2470 1856 no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9374.4 chr17 - 1643 1 full-splice_match H3F3B ENST00000586518.1 1701 1 -4 62 no_subtype FALSE canonical NA NA NA None 4 2 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1075.3 chr1 - 6450 6 novel_not_in_catalog WDR26 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1674 None 3 37 3 TRUE 0 0 NA B coding 137 411 20 430 PB.9374.2 chr17 - 2690 5 novel_not_in_catalog H3F3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 120 None 3 18 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.9374.1 chr17 - 884 4 full-splice_match H3F3B ENST00000254810.8 2705 4 3 1818 no_subtype TRUE canonical NA NA 120 None 358 1 0 FALSE 0 0 NA C coding 136 408 131 538 PB.5726.3 chr10 - 6615 36 novel_not_in_catalog SVIL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 26 None 2 14 2 TRUE 0 0 NA B coding 1479 4437 1373 5809 PB.5726.1 chr10 - 6883 35 novel_not_in_catalog SVIL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 301 None 2 10 2 FALSE 0 0 NA B coding 1479 4437 1533 5969 PB.11105.1 chrX - 2931 2 incomplete-splice_match ACSL4 ENST00000348502.10 5032 16 2098 3 5prime_fragment FALSE canonical NA NA 84 None 3 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7745.1 chr14 + 1508 16 full-splice_match SLC38A6 ENST00000267488.8 1688 16 85 95 no_subtype TRUE canonical NA NA 1321 None 4 1 0 FALSE 0 0 NA A coding 456 1368 32 1399 PB.5726.5 chr10 - 2806 2 genic_intron novelGene_282 novel NA NA NA NA no_subtype FALSE canonical NA NA 317 None 2 18 0 FALSE 0 0 NA A coding 100 300 1589 1888 PB.4245.1 chr6 - 1733 1 genic_intron novelGene_1286 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A coding 119 357 231 587 PB.1746.2 chr2 - 3603 4 novel_not_in_catalog ORMDL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 337 None 4 30 2 TRUE 0 0 NA C coding 153 459 1703 2161 PB.11082.1 chrX - 1315 7 full-splice_match GLA ENST00000218516.3 1318 7 0 3 no_subtype FALSE canonical NA NA 216 None 12 0 0 FALSE 0 0 NA A coding 429 1287 23 1309 PB.6967.1 chr12 + 2631 17 novel_not_in_catalog LARP4 novel NA NA NA NA no_subtype TRUE canonical NA NA 1960 None 2 5 0 FALSE 0 0 NA B coding 724 2172 125 2296 PB.46.13 chr1 + 5306 26 novel_not_in_catalog PIK3CD novel NA NA NA NA no_subtype FALSE canonical NA NA 3299 None 5 19 0 TRUE 0 0 NA C coding 1044 3132 303 3434 PB.46.11 chr1 + 5452 28 novel_not_in_catalog PIK3CD novel NA NA NA NA no_subtype FALSE canonical NA NA 3452 None 2 20 0 TRUE 0 0 NA C coding 1044 3132 456 3587 PB.46.10 chr1 + 5335 27 novel_not_in_catalog PIK3CD novel NA NA NA NA no_subtype FALSE canonical NA NA 3335 None 17 19 0 TRUE 0 0 NA C coding 1044 3132 339 3470 PB.46.14 chr1 + 5502 21 novel_in_catalog PIK3CD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3504 None 4 18 0 FALSE 0 0 NA C coding 604 1812 140 1951 PB.3897.6 chr6 + 2893 15 novel_in_catalog CMTR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1400 None 4 7 0 FALSE 0 0 NA C coding 474 1422 109 1530 PB.3897.4 chr6 + 5671 22 novel_not_in_catalog CMTR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 4178 None 2 38 1 TRUE 0 0 NA C coding 433 1299 93 1391 PB.3897.5 chr6 + 1347 1 novel_in_catalog CMTR1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3897.2 chr6 + 3998 24 full-splice_match CMTR1 ENST00000373451.8 4033 24 37 -2 no_subtype FALSE canonical NA NA 2502 None 14 10 0 FALSE 0 0 NA C coding 835 2505 128 2632 PB.3897.3 chr6 + 4483 25 novel_not_in_catalog CMTR1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2991 None 2 19 1 TRUE 0 0 NA C coding 708 2124 113 2236 PB.3897.1 chr6 + 3976 25 novel_not_in_catalog CMTR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2484 None 35 8 0 TRUE 0 0 NA C coding 835 2505 110 2614 PB.4128.1 chr6 + 3129 2 novel_not_in_catalog ENPP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2634 None 2 20 0 TRUE 0 0 NA B coding 92 276 24 299 PB.6263.2 chr11 - 3694 10 full-splice_match FBXO3 ENST00000448981.6 1672 10 34 -2056 no_subtype FALSE canonical NA NA 116 None 3 11 0 FALSE 0 0 NA C coding 415 1245 13 1257 PB.6263.3 chr11 - 2910 1 novel_in_catalog FBXO3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8739.2 chr16 + 1605 7 antisense novelGene_GLG1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1453 None 2 9 3 FALSE 0 0 NA B non_coding NA NA NA NA PB.6263.1 chr11 - 2617 11 novel_in_catalog FBXO3 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 108 None 9 9 0 FALSE 0 0 NA C coding 412 1236 14 1249 PB.9305.7 chr17 - 3525 12 full-splice_match DDX5 ENST00000581230.5 3558 12 0 33 no_subtype FALSE canonical NA NA 214 None 181 3 0 FALSE 0 0 NA C coding 406 1218 171 1388 PB.93.2 chr1 + 3031 1 genic_intron novelGene_162 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A coding 109 327 1504 1830 PB.3801.2 chr6 - 2806 3 genic ZSCAN12 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 253 None 7 16 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.1940.7 chr2 + 2069 1 incomplete-splice_match LRRFIP1 ENST00000289175.10 3709 8 1620 21 no_subtype FALSE canonical NA NA NA None 15 3 0 FALSE 0 0 NA C coding 262 786 162 947 PB.8239.1 chr15 + 1150 9 full-splice_match PSMA4 ENST00000044462.11 4411 9 31 3230 no_subtype FALSE canonical NA NA 750 None 7 2 0 FALSE 0 0 NA A coding 261 783 120 902 PB.2655.1 chr3 + 3883 9 novel_not_in_catalog ST6GAL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3378 None 2 17 1 TRUE 0 0 NA B coding 406 1218 599 1816 PB.493.2 chr1 + 1520 2 novel_not_in_catalog DR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 485 None 2 5 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.493.1 chr1 + 2719 3 full-splice_match DR1 ENST00000370272.8 10148 3 516 6913 no_subtype FALSE canonical NA NA 626 None 76 7 0 FALSE 0 0 NA C coding 176 528 243 770 PB.10310.1 chr20 + 1468 12 full-splice_match HM13 ENST00000340852.9 1606 12 110 28 no_subtype FALSE canonical NA NA 1048 None 102 3 0 FALSE 0 0 NA C coding 377 1131 15 1145 PB.5964.1 chr10 + 1343 9 full-splice_match CUTC ENST00000370476.9 1346 9 -3 6 no_subtype FALSE canonical NA NA 839 None 3 3 0 FALSE 0 0 NA A coding 273 819 133 951 PB.8185.1 chr15 + 1713 1 antisense novelGene_TLE3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 14 13 0 FALSE 0 0 NA A coding 107 321 739 1059 PB.5795.1 chr10 + 3227 1 genic_intron novelGene_574 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10255.1 chr20 - 1371 4 full-splice_match TMEM230 ENST00000202834.11 1472 4 46 55 no_subtype FALSE canonical NA NA 97 None 8 6 0 FALSE 0 0 NA C coding 120 360 113 472 PB.10310.3 chr20 + 1369 13 novel_not_in_catalog HM13 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 952 None 2 3 0 TRUE 0 0 NA C coding 312 936 114 1049 PB.10255.2 chr20 - 1459 4 full-splice_match TMEM230 ENST00000379299.6 1642 4 150 33 no_subtype FALSE canonical NA NA 163 None 2 7 0 FALSE 0 0 NA C coding 119 357 182 538 PB.4376.16 chr7 - 3680 1 genic_intron novelGene_362 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5354.1 chr9 + 5692 26 full-splice_match DAPK1 ENST00000472284.5 5759 26 64 3 no_subtype FALSE canonical NA NA 3196 None 18 6 0 FALSE 0 0 NA C coding 1430 4290 137 4426 PB.5354.2 chr9 + 5879 26 full-splice_match DAPK1 ENST00000408954.7 5892 26 14 -1 no_subtype FALSE canonical NA NA 3381 None 21 9 0 FALSE 0 0 NA C coding 1430 4290 322 4611 PB.10310.2 chr20 + 3020 14 novel_not_in_catalog HM13 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2791 None 9 16 0 TRUE 0 0 NA C coding 377 1131 96 1226 PB.8485.2 chr16 + 1630 4 incomplete-splice_match TMEM159 ENST00000261388.7 1812 5 172 10 internal_fragment FALSE canonical NA NA 505 None 3 7 0 FALSE 0 0 NA C coding 161 483 102 584 PB.8485.1 chr16 + 1659 5 full-splice_match TMEM159 ENST00000233047.8 2014 5 339 16 no_subtype FALSE canonical NA NA 533 None 14 8 0 FALSE 0 0 NA C coding 161 483 130 612 PB.7573.1 chr13 + 2789 9 novel_in_catalog NAXD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 905 None 2 20 0 FALSE 0 0 NA A coding 126 378 676 1053 PB.742.14 chr1 + 2930 2 full-splice_match SEMA4A ENST00000484155.1 576 2 -1277 -1077 no_subtype FALSE canonical NA NA 1601 None 3 10 0 FALSE 0 0 NA C coding 224 672 1520 2191 PB.8731.1 chr16 - 3150 3 antisense novelGene_IST1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 52 None 3 26 0 FALSE 0 0 NA A coding 111 333 2241 2573 PB.10310.4 chr20 + 3528 11 novel_in_catalog HM13 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3106 None 2 28 0 FALSE 0 0 NA C coding 282 846 87 932 PB.6499.2 chr11 + 3733 25 novel_not_in_catalog TPCN2 novel NA NA NA NA no_subtype TRUE canonical NA NA 3179 None 2 14 0 TRUE 0 0 NA B coding 635 1905 1351 3255 PB.6499.1 chr11 + 2773 26 novel_not_in_catalog TPCN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2218 None 18 1 0 TRUE 0 0 NA B coding 752 2256 39 2294 PB.2257.1 chr3 - 3463 14 novel_not_in_catalog ARHGEF3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 82 None 9 12 1 TRUE 0 0 NA C coding 532 1596 32 1627 PB.11038.1 chrX - 1746 1 incomplete-splice_match RLIM ENST00000332687.10 8317 4 6295 277 no_subtype FALSE canonical NA NA NA None 3 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6639.1 chr11 + 5651 15 full-splice_match SIK2 ENST00000304987.3 9678 15 77 3950 no_subtype TRUE canonical NA NA 2243 None 3 18 0 FALSE 0 0 NA A coding 926 2778 97 2874 PB.112.1 chr1 - 2894 18 novel_not_in_catalog EIF4G3 novel NA NA NA NA no_subtype FALSE canonical NA NA 460 None 4 8 0 TRUE 0 0 NA A coding 763 2289 326 2614 PB.6967.2 chr12 + 2904 3 novel_not_in_catalog LARP4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 263 None 2 20 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.7319.1 chr12 + 2869 3 genic_intron novelGene_1056 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1388 None 5 24 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2092.5 chr3 - 5375 7 novel_not_in_catalog TRANK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 196 None 2 22 1 TRUE 0 0 NA B coding 264 792 66 857 PB.2092.6 chr3 - 6261 2 novel_not_in_catalog TRANK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3183 None 5 35 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.6832.1 chr12 - 3196 1 antisense novelGene_ETV6_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A coding 165 495 214 708 PB.9676.1 chr19 + 2996 22 novel_not_in_catalog TJP3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2770 None 61 3 1 TRUE 0 0 NA B coding 914 2742 129 2870 PB.2720.1 chr4 - 3241 18 full-splice_match NOP14 ENST00000416614.6 3538 18 12 285 no_subtype FALSE canonical NA NA 249 None 57 16 0 FALSE 0 0 NA C coding 857 2571 55 2625 PB.2092.2 chr3 - 3161 7 novel_in_catalog TRANK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 211 None 10 13 0 FALSE 0 0 NA B coding 296 888 81 968 PB.2092.3 chr3 - 5819 6 novel_in_catalog TRANK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 211 None 2 38 1 FALSE 0 0 NA B coding 199 597 81 677 PB.2282.1 chr3 + 3110 4 novel_not_in_catalog ADAMTS9-AS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 860 None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8499.1 chr16 + 3349 1 incomplete-splice_match UBFD1 ENST00000567212.5 4727 7 1374 5 no_subtype FALSE canonical NA NA NA None 11 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.33.2 chr1 + 5694 12 novel_not_in_catalog ZBTB48 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5335 None 3 21 1 TRUE 0 0 NA B coding 393 1179 4451 5629 PB.33.1 chr1 + 5820 13 novel_not_in_catalog ZBTB48 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5461 None 2 25 1 TRUE 0 0 NA B coding 311 933 213 1145 PB.4215.1 chr6 + 3067 2 incomplete-splice_match ARID1B ENST00000636254.1 3848 4 1207 -426 internal_fragment FALSE canonical NA NA 107 None 2 8 0 FALSE 0 0 NA B coding 609 1827 3 1829 PB.5362.7 chr9 + 3467 1 genic_intron novelGene_834 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 10 0 FALSE 0 0 NA B coding 123 369 76 444 PB.8725.2 chr16 - 3920 3 novel_not_in_catalog CMTR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 263 None 5 14 1 TRUE 0 0 NA B coding 770 2310 371 2680 PB.8725.1 chr16 - 3999 3 novel_not_in_catalog CMTR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 279 None 3 20 1 FALSE 0 0 NA B coding 770 2310 387 2696 PB.8206.1 chr15 + 1526 4 genic_intron novelGene_702 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 324 None 4 9 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7379.1 chr12 + 3484 5 novel_in_catalog ZNF268 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 925 None 2 6 0 FALSE 0 0 NA A coding 947 2841 469 3309 PB.5362.1 chr9 - 3243 2 genic_intron novelGene_831 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2997 None 3 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.11125.1 chrX + 1777 6 full-splice_match UBE2A ENST00000371558.6 1874 6 98 -1 no_subtype FALSE canonical NA NA 477 None 71 8 0 FALSE 0 0 NA C coding 152 456 148 603 PB.4832.1 chr8 - 3025 11 novel_not_in_catalog TNFRSF10A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 342 None 5 15 0 TRUE 0 0 NA A coding 468 1404 37 1440 PB.5564.2 chr9 - 2852 5 novel_in_catalog ASB6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 264 None 5 13 0 FALSE 0 0 NA C coding 188 564 1393 1956 PB.5092.1 chr8 + 1715 1 genic_intron novelGene_1066 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7144.1 chr12 - 3021 1 incomplete-splice_match KITLG ENST00000378535.4 5191 9 2168 3 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5675.22 chr10 + 734 1 incomplete-splice_match CELF2 ENST00000631460.1 5538 14 3187 1618 no_subtype FALSE canonical NA NA NA None 6 5 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1663.3 chr2 - 1645 14 novel_not_in_catalog RBMS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 228 None 2 2 0 FALSE 0 0 NA C coding 402 1206 154 1359 PB.1663.2 chr2 - 1640 14 full-splice_match RBMS1 ENST00000348849.7 4273 14 297 2336 no_subtype FALSE canonical NA NA 209 None 2 1 0 FALSE 0 0 NA C coding 406 1218 135 1352 PB.1663.1 chr2 - 1556 14 full-splice_match RBMS1 ENST00000409972.5 1815 14 292 -33 no_subtype FALSE canonical NA NA 134 None 6 3 0 FALSE 0 0 NA C coding 401 1203 66 1268 PB.9205.2 chr17 - 1399 7 novel_not_in_catalog CBX1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 103 None 2 2 0 TRUE 0 0 NA C coding 221 663 235 897 PB.9205.1 chr17 - 1373 5 full-splice_match CBX1 ENST00000225603.8 2232 5 47 812 no_subtype FALSE canonical NA NA 207 None 15 2 0 FALSE 0 0 NA C coding 185 555 245 799 PB.1663.4 chr2 - 3651 1 novel_in_catalog RBMS1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4680.1 chr7 - 3222 1 genic_intron novelGene_1153 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5637.1 chr9 + 1557 4 full-splice_match TUBB4B ENST00000340384.4 1637 4 76 4 no_subtype FALSE canonical NA NA 349 None 84 6 0 FALSE 0 0 NA A coding 445 1335 73 1407 PB.2014.1 chr3 + 2808 11 novel_not_in_catalog HDAC11 novel NA NA NA NA no_subtype TRUE canonical NA NA 862 None 19 8 0 TRUE 0 0 NA A coding 347 1041 35 1075 PB.9384.4 chr17 - 2822 7 novel_not_in_catalog EXOC7 novel NA NA NA NA no_subtype FALSE canonical NA NA 142 None 18 11 0 TRUE 0 0 NA B coding 283 849 83 931 PB.9384.3 chr17 - 3440 16 novel_not_in_catalog EXOC7 novel NA NA NA NA no_subtype FALSE canonical NA NA 143 None 3 13 0 TRUE 0 0 NA B coding 407 1221 84 1304 PB.9384.2 chr17 - 2697 17 novel_not_in_catalog EXOC7 novel NA NA NA NA no_subtype FALSE canonical NA NA 133 None 3 10 0 TRUE 0 0 NA B coding 407 1221 74 1294 PB.9384.1 chr17 - 2065 19 novel_not_in_catalog EXOC7 novel NA NA NA NA no_subtype FALSE canonical NA NA 94 None 10 0 0 TRUE 0 0 NA B coding 653 1959 35 1993 PB.5551.2 chr9 + 3767 14 novel_not_in_catalog TBC1D13 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2908 None 3 22 4 TRUE 0 0 NA B coding 399 1197 73 1269 PB.259.2 chr1 + 1774 1 novel_in_catalog ADPRHL2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA C coding 108 324 41 364 PB.259.1 chr1 + 1646 6 full-splice_match ADPRHL2 ENST00000373178.4 1668 6 20 2 no_subtype FALSE canonical NA NA 812 None 34 4 0 FALSE 0 0 NA C coding 358 1074 26 1099 PB.10361.1 chr20 + 1061 4 full-splice_match C20orf24 ENST00000344795.7 1114 4 47 6 no_subtype FALSE canonical NA NA 519 None 4 3 0 FALSE 0 0 NA A coding 129 387 172 558 PB.2728.1 chr4 - 2866 14 full-splice_match CRMP1 ENST00000397890.6 2911 14 43 2 no_subtype FALSE canonical NA NA 211 None 2 2 0 FALSE 0 0 NA A coding 572 1716 173 1888 PB.124.1 chr1 + 1177 3 full-splice_match C1QC ENST00000374640.8 1163 3 -19 5 no_subtype FALSE canonical NA NA 298 None 34 5 0 FALSE 0 0 NA C coding 245 735 118 852 PB.9519.2 chr18 - 2795 11 full-splice_match SS18 ENST00000415083.6 3414 11 26 593 no_subtype FALSE canonical NA NA 99 None 8 9 0 FALSE 0 0 NA C coding 418 1254 31 1284 PB.124.3 chr1 + 1311 3 full-splice_match C1QC ENST00000374637.1 1089 3 -8 -214 no_subtype FALSE canonical NA NA 436 None 2 12 0 FALSE 0 0 NA C coding 245 735 256 990 PB.124.2 chr1 + 1169 3 full-splice_match C1QC ENST00000374639.7 1183 3 1 13 no_subtype FALSE canonical NA NA 298 None 2 7 0 FALSE 0 0 NA C coding 245 735 118 852 PB.6809.1 chr12 - 2009 3 novel_not_in_catalog C3AR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 155 None 17 5 0 TRUE 0 0 NA A coding 479 1437 166 1602 PB.1665.1 chr2 + 1683 8 full-splice_match TANK ENST00000392749.6 2171 8 21 467 no_subtype FALSE canonical NA NA 1319 None 2 4 1 FALSE 0 0 NA C coding 425 1275 219 1493 PB.9519.4 chr18 - 3768 7 novel_not_in_catalog SS18 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 113 None 2 39 1 TRUE 0 0 NA C coding 204 612 45 656 PB.6485.1 chr11 + 729 7 full-splice_match GSTP1 ENST00000398606.7 965 7 218 18 no_subtype FALSE canonical NA NA 475 None 11 2 0 FALSE 0 0 NA C coding 210 630 32 661 PB.6485.2 chr11 + 2993 1 genic GSTP1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 11 23 0 FALSE 0 0 NA C coding 118 354 2109 2462 PB.6485.3 chr11 + 1560 5 novel_in_catalog GSTP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1305 None 2 12 0 FALSE 0 0 NA C coding 159 477 1015 1491 PB.8590.1 chr16 - 1779 9 full-splice_match DNAJA2 ENST00000317089.9 3122 9 111 1232 no_subtype FALSE canonical NA NA 183 None 23 1 0 FALSE 0 0 NA A coding 412 1236 106 1341 PB.7546.2 chr13 + 3390 6 novel_in_catalog MBNL2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1606 None 2 9 0 FALSE 0 0 NA C coding 353 1059 803 1861 PB.3357.1 chr5 + 2538 1 antisense novelGene_TMEM167A_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 29 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.874.1 chr1 - 3388 1 incomplete-splice_match RC3H1 ENST00000258349.8 10988 19 7596 5 no_subtype FALSE canonical NA NA NA None 4 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2848.1 chr4 + 1729 6 full-splice_match TMEM165 ENST00000381334.9 1928 6 200 -1 no_subtype FALSE canonical NA NA 931 None 4 7 0 FALSE 0 0 NA C coding 324 972 34 1005 PB.5249.1 chr9 - 2564 6 novel_not_in_catalog MOB3B novel NA NA NA NA no_subtype TRUE canonical NA NA 270 None 2 10 0 TRUE 0 0 NA B coding 216 648 469 1116 PB.2848.2 chr4 + 2601 5 novel_in_catalog TMEM165 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 957 None 2 16 0 FALSE 0 0 NA C coding 302 906 166 1071 PB.7899.12 chr14 + 1380 1 incomplete-splice_match PAPOLA ENST00000216277.12 4519 22 3130 10 no_subtype FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5979.2 chr10 + 2667 11 novel_not_in_catalog SFXN3 novel NA NA NA NA no_subtype FALSE canonical NA NA 916 None 64 6 0 TRUE 0 0 NA B coding 321 963 48 1010 PB.7899.10 chr14 + 2860 7 incomplete-splice_match PAPOLA ENST00000216277.12 4519 22 1654 5 internal_fragment FALSE canonical NA NA 708 None 7 6 0 FALSE 0 0 NA C coding 265 795 7 801 PB.4402.1 chr7 - 1591 11 full-splice_match POLD2 ENST00000610533.4 1619 11 13 15 no_subtype FALSE canonical NA NA 36 None 78 3 0 FALSE 0 0 NA A coding 469 1407 93 1499 PB.2651.1 chr3 - 2694 8 full-splice_match TBCCD1 ENST00000338733.9 2441 8 11 -264 no_subtype FALSE canonical NA NA 75 None 10 5 0 FALSE 0 0 NA A coding 557 1671 119 1789 PB.6065.1 chr10 - 2876 6 full-splice_match C10orf88 ENST00000481909.1 2482 6 204 -598 no_subtype FALSE canonical NA NA 185 None 16 5 0 FALSE 0 0 NA A coding 445 1335 22 1356 PB.4919.1 chr8 - 2618 10 full-splice_match TCEA1 ENST00000521604.6 2858 10 239 1 no_subtype FALSE canonical NA NA 228 None 10 10 0 FALSE 0 0 NA A coding 301 903 166 1068 PB.8717.2 chr16 + 2915 12 full-splice_match DDX19A ENST00000302243.11 2997 12 74 8 no_subtype FALSE canonical NA NA 1464 None 53 12 0 FALSE 0 0 NA C coding 478 1434 90 1523 PB.3817.1 chr6 - 1968 20 full-splice_match ABHD16A ENST00000395952.7 2103 20 120 15 no_subtype TRUE canonical NA NA 175 None 41 3 0 FALSE 0 0 NA A coding 558 1674 44 1717 PB.1867.4 chr2 - 2955 9 novel_not_in_catalog CNPPD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 193 None 2 16 2 FALSE 0 0 NA C coding 419 1257 125 1381 PB.7645.2 chr14 + 2960 15 full-splice_match G2E3 ENST00000206595.10 5804 15 35 2809 no_subtype FALSE canonical NA NA 1983 None 4 4 0 FALSE 0 0 NA A coding 706 2118 120 2237 PB.10514.2 chr21 - 3670 9 full-splice_match ADAMTS1 ENST00000284984.7 5191 9 0 1521 no_subtype FALSE canonical NA NA 1185 None 2 2 0 FALSE 0 0 NA C coding 967 2901 456 3356 PB.10514.1 chr21 - 4633 10 novel_not_in_catalog ADAMTS1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1184 None 9 12 1 TRUE 0 0 NA C coding 950 2850 506 3355 PB.8123.3 chr15 - 3136 10 novel_in_catalog BNIP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 186 None 4 15 1 FALSE 0 0 NA B coding 107 321 244 564 PB.9219.1 chr17 - 1819 7 full-splice_match PHB ENST00000300408.7 1832 7 3 10 no_subtype FALSE canonical NA NA 43 None 8 4 0 FALSE 0 0 NA A coding 272 816 71 886 PB.8123.1 chr15 - 3600 6 genic BNIP2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1987 None 2 30 3 TRUE 0 0 NA B non_coding NA NA NA NA PB.5654.5 chr10 - 2927 3 novel_in_catalog KLF6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 296 None 14 12 0 FALSE 0 0 NA C coding 281 843 195 1037 PB.5654.4 chr10 - 3482 2 full-splice_match KLF6 ENST00000469435.1 2169 2 -45 -1268 no_subtype FALSE canonical NA NA 326 None 3 17 0 FALSE 0 0 NA C coding 281 843 225 1067 PB.10502.1 chr21 - 3944 5 full-splice_match HSPA13 ENST00000285667.3 3986 5 37 5 no_subtype TRUE canonical NA NA 56 None 21 19 0 FALSE 0 0 NA A coding 471 1413 32 1444 PB.5654.1 chr10 - 1525 4 novel_not_in_catalog KLF6 novel NA NA NA NA no_subtype FALSE canonical NA NA 297 None 375 2 1 FALSE 0 0 NA C coding 282 846 196 1041 PB.6801.1 chr12 - 2731 6 full-splice_match C1RL ENST00000266542.8 3394 6 75 588 no_subtype FALSE canonical NA NA 89 None 2 10 0 FALSE 0 0 NA C coding 487 1461 19 1479 PB.6801.2 chr12 - 3820 1 novel_in_catalog C1RL novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA C coding 112 336 2964 3299 PB.6801.3 chr12 - 3929 1 novel_in_catalog C1RL novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA C coding 152 456 21 476 PB.8062.3 chr15 + 1536 10 novel_not_in_catalog SQRDL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1248 None 2 7 0 TRUE 0 0 NA C coding 168 504 79 582 PB.8062.1 chr15 + 1647 10 full-splice_match SQRDL ENST00000260324.11 2003 10 331 25 no_subtype FALSE canonical NA NA 1350 None 148 1 0 FALSE 0 0 NA C coding 450 1350 56 1405 PB.3460.1 chr5 + 2962 1 genic_intron novelGene_1140 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8062.4 chr15 + 1685 10 novel_not_in_catalog SQRDL novel NA NA NA NA no_subtype FALSE canonical NA NA 1398 None 2 3 0 FALSE 0 0 NA C coding 450 1350 104 1453 PB.2906.2 chr4 + 3928 1 genic BMP3 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10838.1 chr22 + 3091 12 novel_not_in_catalog TRABD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1845 None 5 27 0 TRUE 0 0 NA C coding 425 1275 743 2017 PB.11008.2 chrX - 1700 8 novel_not_in_catalog VSIG4 novel NA NA NA NA no_subtype FALSE canonical NA NA 138 None 5 1 0 FALSE 0 0 NA C coding 332 996 84 1079 PB.10838.3 chr22 + 1415 10 full-splice_match TRABD ENST00000380909.8 2272 10 0 857 no_subtype FALSE canonical NA NA 1052 None 2 3 0 FALSE 0 0 NA C coding 376 1128 97 1224 PB.10838.5 chr22 + 2617 8 novel_in_catalog TRABD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1373 None 7 9 0 FALSE 0 0 NA C coding 224 672 105 776 PB.10838.6 chr22 + 1386 11 novel_not_in_catalog TRABD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1020 None 2 5 2 TRUE 0 0 NA C coding 376 1128 65 1192 PB.3086.1 chr4 + 858 6 full-splice_match RPS3A ENST00000274065.8 934 6 58 18 no_subtype FALSE canonical NA NA 695 None 24 0 0 FALSE 0 0 NA A coding 264 792 23 814 PB.10838.8 chr22 + 2713 7 novel_in_catalog TRABD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1467 None 4 9 0 FALSE 0 0 NA C coding 181 543 102 644 PB.4701.2 chr7 - 1396 1 incomplete-splice_match ZC3HAV1 ENST00000242351.9 7100 13 4100 1605 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9754.2 chr19 + 3062 6 novel_in_catalog ICAM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1228 None 21 6 0 FALSE 0 0 NA C coding 477 1431 49 1479 PB.8378.1 chr16 + 1689 2 full-splice_match SYNGR3 ENST00000564642.1 752 2 31 -968 no_subtype FALSE canonical NA NA 285 None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11039.1 chrX - 5694 19 novel_not_in_catalog ABCB7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 178 None 2 25 1 TRUE 0 0 NA C coding 752 2256 11 2266 PB.6735.6 chr11 + 2572 1 genic_intron novelGene_1113 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 12 0 FALSE 0 0 NA A coding 162 486 518 1003 PB.8326.1 chr15 - 2650 3 novel_in_catalog LYSMD4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 43 None 10 11 0 FALSE 0 0 NA A coding 296 888 52 939 PB.6499.4 chr11 + 5545 8 novel_not_in_catalog TPCN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4990 None 2 53 1 TRUE 0 0 NA B coding 132 396 4671 5066 PB.2608.1 chr3 + 2732 22 novel_not_in_catalog USP13 novel NA NA NA NA no_subtype FALSE canonical NA NA 2588 None 6 0 0 TRUE 0 0 NA A coding 477 1431 1249 2679 PB.4148.10 chr6 - 2853 12 novel_in_catalog BCLAF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 85 None 2 4 0 FALSE 0 0 NA C coding 698 2094 200 2293 PB.4148.11 chr6 - 2765 11 incomplete-splice_match BCLAF1 ENST00000527536.5 5371 12 33 2573 internal_fragment FALSE canonical NA NA 84 None 2 1 0 FALSE 0 0 NA C coding 855 2565 199 2763 PB.4148.13 chr6 - 1572 4 novel_in_catalog BCLAF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 120 None 2 1 0 FALSE 0 0 NA C coding 339 1017 235 1251 PB.4148.14 chr6 - 3354 1 novel_in_catalog BCLAF1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3468.1 chr5 + 3105 17 incomplete-splice_match RAD50 ENST00000378823.7 8306 25 49 5152 3prime_fragment FALSE canonical NA NA 3056 None 16 3 0 FALSE 0 0 NA B coding 922 2766 339 3104 PB.3468.2 chr5 + 3397 20 incomplete-splice_match RAD50 ENST00000378823.7 8306 25 56 4853 3prime_fragment FALSE canonical NA NA 3367 None 2 2 0 FALSE 0 0 NA B coding 1022 3066 332 3397 PB.3468.3 chr5 + 3296 19 incomplete-splice_match RAD50 ENST00000378823.7 8306 25 60 4950 3prime_fragment FALSE canonical NA NA 3249 None 2 2 0 FALSE 0 0 NA B coding 989 2967 328 3294 PB.11025.1 chrX + 3893 22 full-splice_match OGT ENST00000373719.7 5461 22 21 1547 no_subtype FALSE canonical NA NA 3162 None 8 2 0 FALSE 0 0 NA C coding 1046 3138 197 3334 PB.11025.2 chrX + 7163 21 novel_in_catalog OGT novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 6433 None 4 12 0 FALSE 0 0 NA C coding 920 2760 3846 6605 PB.8133.4 chr15 - 1749 11 full-splice_match CA12 ENST00000178638.7 6413 11 315 4349 no_subtype FALSE canonical NA NA 211 None 3 2 0 FALSE 0 0 NA C coding 354 1062 127 1188 PB.8133.1 chr15 - 3645 13 novel_not_in_catalog CA12 novel NA NA NA NA no_subtype FALSE canonical NA NA 211 None 21 20 2 TRUE 0 0 NA C coding 354 1062 127 1188 PB.8133.3 chr15 - 2748 12 novel_not_in_catalog CA12 novel NA NA NA NA no_subtype FALSE canonical NA NA 207 None 233 10 1 TRUE 0 0 NA C coding 354 1062 123 1184 PB.5597.1 chr9 - 3597 19 novel_not_in_catalog RALGDS novel NA NA NA NA no_subtype FALSE canonical NA NA 171 None 2 9 0 TRUE 0 0 NA B coding 897 2691 40 2730 PB.4916.6 chr8 - 2771 1 genic_intron novelGene_516 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3308.1 chr5 + 1474 9 full-splice_match SMN1 ENST00000380707.8 1536 9 59 3 no_subtype FALSE canonical NA NA 903 None 17 2 0 FALSE 0 0 NA A coding 294 882 16 897 PB.316.1 chr1 - 2761 2 antisense novelGene_U3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1073 None 2 24 1 FALSE 0 0 NA A coding 102 306 2308 2613 PB.7051.13 chr12 - 2729 6 genic STAT6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1427 None 4 10 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.7718.1 chr14 - 3791 28 novel_not_in_catalog WDHD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 74 None 4 8 0 TRUE 0 0 NA A coding 1129 3387 91 3477 PB.4046.1 chr6 - 2149 12 full-splice_match CCNC ENST00000520429.5 2473 12 313 11 no_subtype FALSE canonical NA NA 165 None 6 2 0 FALSE 0 0 NA A coding 283 849 134 982 PB.1227.1 chr2 - 1606 1 genic_intron novelGene_254 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4916.3 chr8 - 3685 5 novel_in_catalog PCMTD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 149 None 2 22 0 FALSE 0 0 NA C coding 181 543 371 913 PB.11008.1 chrX - 1807 8 full-splice_match VSIG4 ENST00000374737.8 1834 8 29 -2 no_subtype FALSE canonical NA NA 135 None 3 2 0 FALSE 0 0 NA C coding 399 1197 81 1277 PB.2103.1 chr3 + 3682 19 full-splice_match WDR48 ENST00000302313.9 3707 19 14 11 no_subtype TRUE canonical NA NA 1952 None 50 9 0 FALSE 0 0 NA A coding 677 2031 15 2045 PB.4916.2 chr8 - 4104 6 full-splice_match PCMTD1 ENST00000522514.5 1287 6 -56 -2761 no_subtype FALSE canonical NA NA 163 None 8 21 0 FALSE 0 0 NA C coding 357 1071 259 1329 PB.3755.3 chr6 + 1629 1 novel_in_catalog MYLIP novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 13 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3755.2 chr6 + 1429 1 antisense novelGene_SNORA20_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3755.1 chr6 + 1693 7 novel_not_in_catalog MYLIP novel NA NA NA NA no_subtype FALSE canonical NA NA 1489 None 10 3 1 FALSE 0 0 NA B coding 278 834 238 1071 PB.2092.7 chr3 + 3085 2 antisense novelGene_TRANK1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2709 None 4 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6497.1 chr11 + 2623 13 incomplete-splice_match IGHMBP2 ENST00000255078.7 3961 15 75 1263 3prime_fragment FALSE canonical NA NA 1792 None 14 3 0 FALSE 0 0 NA B coding 862 2586 37 2622 PB.8718.1 chr16 - 3901 6 novel_in_catalog ST3GAL2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 149 None 2 38 1 FALSE 0 0 NA C coding 290 870 1153 2022 PB.2962.2 chr4 + 3326 14 novel_not_in_catalog PDLIM5 novel NA NA NA NA no_subtype FALSE canonical NA NA 1822 None 19 10 0 TRUE 0 0 NA C coding 596 1788 122 1909 PB.6497.2 chr11 + 3807 16 novel_not_in_catalog IGHMBP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3671 None 4 19 2 TRUE 0 0 NA B coding 993 2979 11 2989 PB.8342.1 chr16 - 2075 7 incomplete-splice_match AXIN1 ENST00000354866.7 3324 10 1247 2 5prime_fragment FALSE canonical NA NA 31 None 2 13 1 FALSE 0 0 NA A coding 409 1227 167 1393 PB.8837.1 chr17 - 6009 21 novel_not_in_catalog SMG6 novel NA NA NA NA no_subtype FALSE canonical NA NA 198 None 13 16 0 TRUE 0 0 NA B coding 1419 4257 111 4367 PB.870.1 chr1 - 1941 2 genic_intron novelGene_1328 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1741 None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8837.3 chr17 - 4117 1 full-splice_match RP11-667K14.9 ENST00000623339.1 167 1 -3463 -487 no_subtype FALSE canonical NA NA NA None 2 35 0 FALSE 0 0 NA A coding 100 300 1412 1711 PB.8837.2 chr17 - 5968 21 novel_not_in_catalog SMG6 novel NA NA NA NA no_subtype TRUE canonical NA NA 155 None 2 17 0 TRUE 0 0 NA B coding 1388 4164 161 4324 PB.2035.1 chr3 - 1815 1 genic_intron novelGene_136 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10643.1 chr22 - 1079 5 full-splice_match DGCR6L ENST00000248879.7 1154 5 66 9 no_subtype FALSE canonical NA NA 136 None 2 4 0 FALSE 0 0 NA A coding 220 660 27 686 PB.10127.1 chr19 + 3131 26 novel_not_in_catalog MYH14 novel NA NA NA NA no_subtype FALSE canonical NA NA 3062 None 2 1 0 TRUE 0 0 NA B coding 1042 3126 6 3131 PB.2720.2 chr4 - 3330 19 novel_not_in_catalog NOP14 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 279 None 13 13 1 TRUE 0 0 NA C coding 857 2571 85 2655 PB.6328.3 chr11 - 5782 13 novel_not_in_catalog TNKS1BP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 80 None 2 9 0 TRUE 0 0 NA B coding 1729 5187 146 5332 PB.4095.1 chr6 - 2769 10 novel_not_in_catalog FRK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 96 None 2 7 1 TRUE 0 0 NA A coding 505 1515 376 1890 PB.10068.2 chr19 + 1535 1 incomplete-splice_match CALM3 ENST00000291295.13 2289 6 741 14 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10068.1 chr19 + 2165 6 full-splice_match CALM3 ENST00000291295.13 2289 6 110 14 no_subtype FALSE canonical NA NA 510 None 41 6 0 FALSE 0 0 NA C coding 149 447 90 536 PB.2720.3 chr4 - 3147 17 novel_in_catalog NOP14 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 231 None 3 16 1 FALSE 0 0 NA C coding 823 2469 37 2505 PB.7784.1 chr14 + 3215 10 novel_not_in_catalog EXD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1744 None 20 4 0 TRUE 0 0 NA B coding 621 1863 96 1958 PB.6703.2 chr11 + 1632 9 novel_in_catalog SORL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1226 None 2 2 0 FALSE 0 0 NA B coding 472 1416 16 1431 PB.7963.2 chr15 - 3088 19 incomplete-splice_match CYFIP1 ENST00000610365.4 4515 32 1425 2 5prime_fragment FALSE canonical NA NA 125 None 2 5 0 FALSE 0 0 NA C coding 797 2391 135 2525 PB.7963.3 chr15 - 4410 31 full-splice_match CYFIP1 ENST00000617928.4 6793 31 -33 2416 no_subtype FALSE canonical NA NA 82 None 30 5 0 FALSE 0 0 NA C coding 1253 3759 89 3847 PB.6439.3 chr11 - 3696 10 novel_not_in_catalog MAP3K11 novel NA NA NA NA no_subtype FALSE canonical NA NA 1200 None 2 12 0 FALSE 0 0 NA C coding 539 1617 462 2078 PB.2191.1 chr3 - 3016 23 novel_not_in_catalog USP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 136 None 140 0 0 TRUE 0 0 NA B coding 963 2889 36 2924 PB.2191.6 chr3 - 2850 22 novel_not_in_catalog USP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 118 None 2 1 0 TRUE 0 0 NA B coding 899 2697 18 2714 PB.1093.1 chr1 + 3286 1 novel_in_catalog ZNF678 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7963.4 chr15 - 4404 31 novel_in_catalog CYFIP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 82 None 10 5 0 FALSE 0 0 NA C coding 1251 3753 89 3841 PB.2191.5 chr3 - 2965 22 novel_not_in_catalog USP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 145 None 2 5 0 TRUE 0 0 NA B coding 857 2571 45 2615 PB.7323.1 chr12 - 2026 6 full-splice_match OASL ENST00000257570.9 3266 6 32 1208 no_subtype FALSE canonical NA NA 437 None 42 4 0 FALSE 0 0 NA C coding 514 1542 240 1781 PB.2191.9 chr3 - 3428 1 novel_in_catalog USP4 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2358.6 chr3 - 1309 11 full-splice_match CD47 ENST00000361309.5 1285 11 -23 -1 no_subtype FALSE canonical NA NA 175 None 2 1 0 FALSE 0 0 NA C coding 323 969 130 1098 PB.225.2 chr1 + 2986 1 incomplete-splice_match TXLNA ENST00000373610.7 4854 11 1866 3 no_subtype FALSE canonical NA NA NA None 3 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.225.1 chr1 + 4788 11 full-splice_match TXLNA ENST00000373610.7 4854 11 63 3 no_subtype FALSE canonical NA NA 1407 None 5 12 0 FALSE 0 0 NA C coding 546 1638 61 1698 PB.3347.1 chr5 + 1410 1 antisense novelGene_SERINC5_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10433.9 chr20 + 2557 22 novel_not_in_catalog DDX27 novel NA NA NA NA no_subtype FALSE canonical NA NA 2310 None 11 5 0 TRUE 0 0 NA A coding 765 2295 32 2326 PB.8056.1 chr15 + 1727 8 full-splice_match EIF3J ENST00000261868.9 2569 8 121 721 no_subtype FALSE canonical NA NA 662 None 6 7 0 FALSE 0 0 NA A coding 258 774 18 791 PB.10433.3 chr20 + 3255 24 novel_in_catalog CSE1L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3020 None 3 1 0 FALSE 0 0 NA C coding 838 2514 594 3107 PB.10433.2 chr20 + 3164 25 full-splice_match CSE1L ENST00000262982.2 3553 25 27 362 no_subtype FALSE canonical NA NA 2922 None 71 2 0 FALSE 0 0 NA C coding 971 2913 97 3009 PB.10433.1 chr20 + 3682 7 incomplete-splice_match ARFGEF2 ENST00000371917.4 8852 39 4461 709 internal_fragment FALSE canonical NA NA 720 None 2 17 0 FALSE 0 0 NA A coding 292 876 19 894 PB.9948.1 chr19 + 3148 3 full-splice_match LRFN3 ENST00000246529.3 2513 3 -647 12 no_subtype FALSE canonical NA NA 2514 None 2 12 0 FALSE 0 0 NA A coding 628 1884 1100 2983 PB.784.7 chr1 - 6460 13 novel_in_catalog DCAF8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 39 None 4 39 0 FALSE 0 0 NA B coding 485 1455 140 1594 PB.4738.1 chr7 - 670 6 novel_in_catalog RARRES2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 29 None 2 0 0 FALSE 0 0 NA A coding 163 489 50 538 PB.10433.4 chr20 + 3324 26 novel_not_in_catalog CSE1L novel NA NA NA NA no_subtype FALSE canonical NA NA 3092 None 5 5 1 FALSE 0 0 NA C coding 971 2913 267 3179 PB.5873.1 chr10 + 1540 6 full-splice_match PPIF ENST00000225174.7 2190 6 24 626 no_subtype FALSE canonical NA NA 535 None 7 8 1 FALSE 0 0 NA A coding 207 621 48 668 PB.9122.1 chr17 + 2618 10 full-splice_match FKBP10 ENST00000321562.8 2662 10 33 11 no_subtype FALSE canonical NA NA 1634 None 6 6 0 FALSE 0 0 NA A coding 582 1746 72 1817 PB.6011.2 chr10 - 1354 10 full-splice_match OBFC1 ENST00000224950.7 1417 10 73 -10 no_subtype FALSE canonical NA NA 33 None 14 0 0 FALSE 0 0 NA A coding 368 1104 96 1199 PB.10786.1 chr22 + 2648 10 full-splice_match XPNPEP3 ENST00000357137.8 7988 10 -9 5349 no_subtype FALSE canonical NA NA 1450 None 2 12 0 FALSE 0 0 NA A coding 507 1521 94 1614 PB.5528.6 chr9 - 2420 8 novel_not_in_catalog ST6GALNAC6 novel NA NA NA NA no_subtype FALSE canonical NA NA 118 None 2 10 1 TRUE 0 0 NA B coding 333 999 148 1146 PB.5528.4 chr9 - 2392 7 novel_not_in_catalog ST6GALNAC6 novel NA NA NA NA no_subtype FALSE canonical NA NA 140 None 15 8 0 TRUE 0 0 NA B coding 299 897 217 1113 PB.5528.3 chr9 - 2464 8 novel_not_in_catalog ST6GALNAC6 novel NA NA NA NA no_subtype FALSE canonical NA NA 122 None 2 12 0 TRUE 0 0 NA B coding 228 684 199 882 PB.7071.3 chr12 - 1560 3 genic_intron novelGene_598 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 133 None 5 9 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.7071.1 chr12 + 2681 1 novel_in_catalog USP15 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10417.1 chr20 - 1742 16 full-splice_match PLTP ENST00000372431.7 1743 16 -5 6 no_subtype FALSE canonical NA NA 74 None 20 1 0 FALSE 0 0 NA C coding 493 1479 86 1564 PB.10417.2 chr20 - 1494 14 full-splice_match PLTP ENST00000372420.5 1530 14 35 1 no_subtype FALSE canonical NA NA 32 None 4 2 1 FALSE 0 0 NA C coding 405 1215 97 1311 PB.9517.1 chr18 - 3084 31 novel_not_in_catalog OSBPL1A novel NA NA NA NA no_subtype FALSE canonical NA NA 140 None 5 3 1 TRUE 0 0 NA B coding 950 2850 143 2992 PB.3038.1 chr4 + 3280 1 novel_in_catalog LARP1B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5362.6 chr9 + 1865 1 novel_in_catalog SYK novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6936.3 chr12 - 2106 10 novel_not_in_catalog KANSL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 262 None 2 4 0 TRUE 0 0 NA C coding 492 1476 12 1487 PB.6936.2 chr12 - 2155 10 full-splice_match KANSL2 ENST00000420613.6 2155 10 -10 10 no_subtype TRUE canonical NA NA 49 None 2 6 1 FALSE 0 0 NA C coding 492 1476 59 1534 PB.1216.1 chr2 - 1455 4 full-splice_match SF3B6 ENST00000233468.4 770 4 -13 -672 no_subtype FALSE canonical NA NA 257 None 4 6 0 FALSE 0 0 NA A coding 125 375 228 602 PB.2199.1 chr3 - 2848 1 full-splice_match AMIGO3 ENST00000320431.7 2862 1 13 1 no_subtype FALSE canonical NA NA NA None 6 5 0 FALSE 0 0 NA A coding 504 1512 218 1729 PB.11199.5 chrX - 3418 20 novel_not_in_catalog ARHGAP4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 124 None 3 10 1 TRUE 0 0 NA C coding 641 1923 58 1980 PB.3741.1 chr6 - 1558 6 full-splice_match ADTRP ENST00000414691.7 2058 6 350 150 no_subtype FALSE canonical NA NA 214 None 2 7 0 FALSE 0 0 NA A coding 230 690 62 751 PB.10280.1 chr20 - 2922 19 incomplete-splice_match KIF16B ENST00000408042.5 4640 23 63 1655 internal_fragment TRUE canonical NA NA 142 None 14 1 0 FALSE 0 0 NA A coding 942 2826 96 2921 PB.5556.1 chr9 + 5640 46 novel_not_in_catalog NUP188 novel NA NA NA NA no_subtype FALSE canonical NA NA 5309 None 93 9 1 TRUE 0 0 NA A coding 1555 4665 579 5243 PB.10050.1 chr19 + 2466 14 full-splice_match CLPTM1 ENST00000337392.9 2604 14 135 3 no_subtype FALSE canonical NA NA 1738 None 32 1 0 FALSE 0 0 NA A coding 669 2007 16 2022 PB.11018.1 chrX + 6933 45 novel_not_in_catalog MED12 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 6662 None 6 5 0 TRUE 0 0 NA B coding 2178 6534 170 6703 PB.11018.2 chrX + 6811 46 novel_not_in_catalog MED12 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 6541 None 2 8 0 TRUE 0 0 NA B coding 2156 6468 115 6582 PB.6895.1 chr12 - 1949 8 novel_not_in_catalog AMN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 54 None 3 7 0 TRUE 0 0 NA A coding 258 774 17 790 PB.10653.2 chr22 - 1050 5 full-splice_match THAP7 ENST00000399133.2 1144 5 89 5 no_subtype TRUE canonical NA NA 22 None 2 3 0 FALSE 0 0 NA A coding 309 927 23 949 PB.10301.1 chr20 - 793 3 full-splice_match CST3 ENST00000376925.7 873 3 69 11 no_subtype FALSE canonical NA NA 338 None 39 5 0 FALSE 0 0 NA A coding 146 438 96 533 PB.7462.1 chr13 - 1755 3 full-splice_match TSC22D1 ENST00000261489.6 3135 3 -9 1389 no_subtype FALSE canonical NA NA 351 None 85 3 0 FALSE 0 0 NA A coding 134 402 257 658 PB.4585.6 chr7 + 3255 2 novel_in_catalog KMT2E novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 331 None 2 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8625.2 chr16 + 1752 7 novel_in_catalog HERPUD1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1006 None 2 1 0 FALSE 0 0 NA C coding 321 963 102 1064 PB.8625.3 chr16 + 1789 7 full-splice_match HERPUD1 ENST00000379792.6 1782 7 -13 6 no_subtype FALSE canonical NA NA 1034 None 3 1 0 FALSE 0 0 NA C coding 366 1098 99 1196 PB.11199.4 chrX - 2939 20 novel_in_catalog ARHGAP4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 112 None 2 11 1 FALSE 0 0 NA C coding 847 2541 46 2586 PB.8625.1 chr16 + 1454 8 full-splice_match HERPUD1 ENST00000439977.6 2946 8 95 1397 no_subtype FALSE canonical NA NA 1113 None 136 1 0 FALSE 0 0 NA C coding 391 1173 103 1275 PB.3273.1 chr5 + 3280 1 genic_intron novelGene_567 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8411.3 chr16 + 2682 12 full-splice_match DNAJA3 ENST00000262375.10 2763 12 76 5 no_subtype FALSE canonical NA NA 1457 None 19 8 1 FALSE 0 0 NA C coding 480 1440 2 1441 PB.8411.2 chr16 + 2571 11 full-splice_match DNAJA3 ENST00000355296.8 2591 11 10 10 no_subtype FALSE canonical NA NA 1351 None 7 5 0 FALSE 0 0 NA C coding 453 1359 13 1371 PB.699.1 chr1 - 981 5 full-splice_match JTB ENST00000271843.8 1287 5 60 246 no_subtype FALSE canonical NA NA 459 None 7 1 0 FALSE 0 0 NA A coding 146 438 377 814 PB.4771.1 chr7 + 2842 3 novel_not_in_catalog RBM33 novel NA NA NA NA no_subtype FALSE canonical NA NA 1547 None 4 30 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.8678.1 chr16 - 1524 12 full-splice_match ACD ENST00000620761.4 1483 12 -65 24 no_subtype TRUE canonical NA NA 176 None 3 2 0 FALSE 0 0 NA A coding 458 1374 78 1451 PB.2123.1 chr3 + 1616 12 novel_in_catalog NKTR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1490 None 2 3 0 FALSE 0 0 NA B coding 429 1287 328 1614 PB.4985.1 chr8 + 3310 9 novel_not_in_catalog ZC2HC1A novel NA NA NA NA no_subtype FALSE canonical NA NA 869 None 2 34 0 FALSE 0 0 NA A coding 324 972 61 1032 PB.6138.1 chr11 + 2731 4 genic_intron novelGene_25 novel NA NA NA NA no_subtype FALSE canonical NA NA 1811 None 2 22 3 FALSE 0 0 NA A coding 157 471 1409 1879 PB.4527.3 chr7 - 2992 11 novel_in_catalog BAIAP2L1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 251 None 4 6 0 FALSE 0 0 NA B coding 414 1242 201 1442 PB.4527.2 chr7 - 1957 15 novel_not_in_catalog BAIAP2L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 251 None 2 2 1 TRUE 0 0 NA B coding 511 1533 201 1733 PB.4527.1 chr7 - 3533 16 novel_not_in_catalog BAIAP2L1 novel NA NA NA NA no_subtype TRUE canonical NA NA 251 None 5 30 2 TRUE 0 0 NA B coding 511 1533 201 1733 PB.1145.1 chr1 + 1751 5 genic_intron novelGene_1422 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1491 None 2 8 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8244.1 chr15 - 1583 14 novel_not_in_catalog CTSH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 147 None 3 4 2 TRUE 0 0 NA C coding 335 1005 57 1061 PB.8244.3 chr15 - 1081 11 novel_not_in_catalog CTSH novel NA NA NA NA no_subtype FALSE canonical NA NA 147 None 2 1 0 FALSE 0 0 NA C coding 341 1023 57 1079 PB.8927.4 chr17 - 2174 1 novel_in_catalog PIK3R5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 37 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9972.2 chr19 - 2636 32 novel_not_in_catalog MAP4K1 novel NA NA NA NA no_subtype FALSE canonical NA NA 172 None 138 2 0 TRUE 0 0 NA B coding 821 2463 74 2536 PB.9972.3 chr19 - 1540 19 incomplete-splice_match MAP4K1 ENST00000396857.6 2653 31 -12 1125 internal_fragment FALSE canonical NA NA 219 None 2 1 0 FALSE 0 0 NA B coding 473 1419 121 1539 PB.8431.1 chr16 + 2780 4 genic C16orf72 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2571 None 2 22 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.9604.1 chr18 - 2898 1 novel_in_catalog LINC00909 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 22 0 FALSE 0 0 NA A coding 112 336 19 354 PB.10271.1 chr20 + 3354 2 genic_intron novelGene_61 novel NA NA NA NA no_subtype FALSE canonical NA NA 91 None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6296.1 chr11 - 1613 11 full-splice_match PEX16 ENST00000378750.9 1335 11 218 -496 no_subtype FALSE canonical NA NA 138 None 6 3 0 FALSE 0 0 NA A coding 336 1008 27 1034 PB.8147.1 chr15 + 1989 13 full-splice_match TRIP4 ENST00000261884.7 2045 13 39 17 no_subtype TRUE canonical NA NA 1699 None 11 1 0 FALSE 0 0 NA A coding 581 1743 22 1764 PB.11111.1 chrX + 1319 5 novel_not_in_catalog ALG13 novel NA NA NA NA no_subtype FALSE canonical NA NA 1012 None 2 10 1 TRUE 0 0 NA A coding 165 495 50 544 PB.8631.3 chr16 - 1819 9 novel_not_in_catalog FAM192A novel NA NA NA NA no_subtype FALSE canonical NA NA 215 None 2 8 1 FALSE 0 0 NA C coding 254 762 302 1063 PB.8631.2 chr16 - 2826 8 novel_not_in_catalog FAM192A novel NA NA NA NA no_subtype FALSE canonical NA NA 228 None 27 12 0 FALSE 0 0 NA C coding 254 762 247 1008 PB.8631.4 chr16 - 1743 7 full-splice_match FAM192A ENST00000567439.5 1086 7 5 -662 no_subtype FALSE canonical NA NA 211 None 2 9 0 FALSE 0 0 NA C coding 254 762 227 988 PB.9292.3 chr17 - 1342 5 novel_in_catalog LIMD2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 130 None 7 1 0 FALSE 0 0 NA C coding 127 381 228 608 PB.1155.1 chr1 - 2196 13 full-splice_match ADSS ENST00000366535.3 2780 13 224 360 no_subtype FALSE canonical NA NA 276 None 23 10 0 FALSE 0 0 NA A coding 456 1368 94 1461 PB.9292.2 chr17 - 1357 4 novel_in_catalog LIMD2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 94 None 2 8 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.1847.3 chr2 + 3313 20 novel_not_in_catalog XRCC5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2488 None 2 6 0 TRUE 0 0 NA C coding 716 2148 34 2181 PB.9560.1 chr18 - 6992 4 antisense novelGene_CTIF_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1497 None 2 33 3 FALSE 0 0 NA A coding 99 297 2342 2638 PB.11199.6 chrX - 3240 22 full-splice_match ARHGAP4 ENST00000350060.9 3235 22 -14 9 no_subtype FALSE canonical NA NA 123 None 59 6 1 FALSE 0 0 NA C coding 946 2838 57 2894 PB.3512.10 chr5 + 2705 14 full-splice_match MATR3 ENST00000503811.5 2518 14 213 -400 no_subtype FALSE canonical NA NA 1647 None 7 1 0 FALSE 0 0 NA C coding 559 1677 19 1695 PB.1847.1 chr2 + 3291 21 full-splice_match XRCC5 ENST00000392132.6 3428 21 124 13 no_subtype FALSE canonical NA NA 2200 None 153 7 0 FALSE 0 0 NA C coding 732 2196 17 2212 PB.7901.1 chr14 + 3166 2 intergenic novelGene_898 novel NA NA NA NA no_subtype TRUE canonical NA NA 1205 None 4 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9935.1 chr19 + 1869 9 full-splice_match LSR ENST00000354900.7 2105 9 231 5 no_subtype FALSE canonical NA NA 1733 None 6 3 0 FALSE 0 0 NA C coding 582 1746 21 1766 PB.2919.2 chr4 - 2850 2 novel_not_in_catalog PLAC8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2817 None 4 19 1 TRUE 0 0 NA B coding 89 267 32 298 PB.4141.1 chr6 + 1709 2 genic_intron novelGene_1158 novel NA NA NA NA no_subtype TRUE canonical NA NA 1349 None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9935.2 chr19 + 1720 8 full-splice_match LSR ENST00000360798.7 1963 8 243 0 no_subtype FALSE canonical NA NA 1581 None 5 5 0 FALSE 0 0 NA C coding 533 1599 16 1614 PB.3512.12 chr5 + 3132 2 genic_intron novelGene_1176 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2365 None 2 27 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2919.3 chr4 - 2833 1 novel_in_catalog PLAC8 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 17 20 0 FALSE 0 0 NA B coding 89 267 47 313 PB.692.1 chr1 + 4505 30 full-splice_match INTS3 ENST00000318967.6 5235 30 0 730 no_subtype FALSE canonical NA NA 3619 None 6 9 0 FALSE 0 0 NA C coding 1042 3126 569 3694 PB.8439.2 chr16 + 2564 1 incomplete-splice_match SNN ENST00000329565.5 3312 2 727 22 no_subtype FALSE canonical NA NA NA None 3 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8439.1 chr16 + 3147 2 full-splice_match SNN ENST00000329565.5 3312 2 84 81 no_subtype FALSE canonical NA NA 43 None 6 24 0 FALSE 0 0 NA C coding 88 264 129 392 PB.5930.1 chr10 + 3091 22 full-splice_match HELLS ENST00000348459.9 3099 22 6 2 no_subtype FALSE canonical NA NA 2521 None 2 7 1 FALSE 0 0 NA A coding 838 2514 100 2613 PB.641.1 chr1 + 3964 1 antisense novelGene_CH17-478G19.2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3767.1 chr6 - 5866 22 full-splice_match NUP153 ENST00000262077.2 5487 22 -383 4 no_subtype TRUE canonical NA NA 494 None 2 7 0 FALSE 0 0 NA C coding 1475 4425 384 4808 PB.4047.3 chr6 - 6556 39 incomplete-splice_match ASCC3 ENST00000369162.6 8146 42 1037 553 5prime_fragment FALSE canonical NA NA 109 None 2 8 0 FALSE 0 0 NA C coding 1965 5895 20 5914 PB.9810.1 chr19 + 1552 2 genic_intron novelGene_105 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1293 None 2 11 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10978.1 chrX + 2588 12 incomplete-splice_match MAGED1 ENST00000375772.7 2701 13 111 2 internal_fragment FALSE canonical NA NA 2381 None 10 1 0 FALSE 0 0 NA C coding 778 2334 37 2370 PB.10978.3 chrX + 2948 12 novel_in_catalog MAGED1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2150 None 2 4 0 FALSE 0 0 NA C coding 778 2334 192 2525 PB.10978.2 chrX + 2717 13 full-splice_match MAGED1 ENST00000326587.11 2747 13 23 7 no_subtype FALSE canonical NA NA 2512 None 30 0 0 FALSE 0 0 NA C coding 778 2334 168 2501 PB.2510.2 chr3 + 3495 17 novel_not_in_catalog PLS1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3397 None 2 16 0 TRUE 0 0 NA C coding 629 1887 109 1995 PB.3754.3 chr6 - 1728 1 genic_intron novelGene_135 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7195.2 chr12 + 3153 7 full-splice_match DRAM1 ENST00000258534.12 3519 7 352 14 no_subtype FALSE canonical NA NA 759 None 21 20 1 FALSE 0 0 NA C coding 238 714 88 801 PB.8425.1 chr16 + 1547 11 full-splice_match METTL22 ENST00000381920.7 4984 11 -6 3443 no_subtype FALSE canonical NA NA 1443 None 2 2 0 FALSE 0 0 NA C coding 404 1212 265 1476 PB.8425.2 chr16 + 1493 10 full-splice_match METTL22 ENST00000163678.11 1510 10 7 10 no_subtype FALSE canonical NA NA 1386 None 2 2 0 FALSE 0 0 NA C coding 179 537 883 1419 PB.9929.1 chr19 + 2499 19 novel_in_catalog GRAMD1A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2083 None 5 4 0 FALSE 0 0 NA A coding 720 2160 14 2173 PB.969.1 chr1 - 1637 2 full-splice_match RABIF ENST00000367262.3 2430 2 7 786 no_subtype FALSE canonical NA NA 156 None 3 6 0 FALSE 0 0 NA A coding 123 369 31 399 PB.11144.6 chrX + 5681 32 novel_in_catalog STAG2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3770 None 2 4 0 FALSE 0 0 NA C coding 1231 3693 99 3791 PB.11144.4 chrX + 5900 34 novel_in_catalog STAG2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3978 None 6 4 0 FALSE 0 0 NA C coding 1268 3804 196 3999 PB.8276.2 chr15 + 5563 4 novel_not_in_catalog AEN novel NA NA NA NA no_subtype TRUE canonical NA NA 3347 None 3 32 1 TRUE 0 0 NA C coding 201 603 142 744 PB.8276.3 chr15 + 3216 5 novel_not_in_catalog AEN novel NA NA NA NA no_subtype FALSE canonical NA NA 996 None 2 16 0 FALSE 0 0 NA C coding 370 1110 121 1230 PB.2491.1 chr3 + 2692 22 full-splice_match ARMC8 ENST00000469044.5 4790 22 246 1852 no_subtype FALSE canonical NA NA 2013 None 8 4 0 FALSE 0 0 NA C coding 673 2019 26 2044 PB.8276.1 chr15 + 3087 4 full-splice_match AEN ENST00000332810.3 3117 4 21 9 no_subtype FALSE canonical NA NA 871 None 40 15 0 FALSE 0 0 NA C coding 325 975 131 1105 PB.1779.1 chr2 - 2276 12 full-splice_match HSPD1 ENST00000388968.7 2455 12 168 11 no_subtype FALSE canonical NA NA 98 None 26 3 0 FALSE 0 0 NA C coding 573 1719 101 1819 PB.9656.1 chr19 + 2958 13 novel_not_in_catalog SPPL2B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2261 None 2 21 0 TRUE 0 0 NA C coding 444 1332 88 1419 PB.1692.1 chr2 - 2959 3 novel_not_in_catalog TLK1 novel NA NA NA NA no_subtype TRUE canonical NA NA 375 None 2 20 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.563.2 chr1 - 2005 12 full-splice_match DENND2D ENST00000369752.5 1894 12 -129 18 no_subtype FALSE canonical NA NA 243 None 10 8 1 FALSE 0 0 NA C coding 468 1404 186 1589 PB.5414.1 chr9 + 1625 6 full-splice_match NIPSNAP3A ENST00000374767.4 1633 6 0 8 no_subtype FALSE canonical NA NA 772 None 8 5 0 FALSE 0 0 NA A coding 247 741 106 846 PB.1504.1 chr2 - 1865 5 novel_not_in_catalog MITD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1389 None 2 8 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.6224.2 chr11 - 3029 4 novel_not_in_catalog RPS13 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 47 None 4 20 2 TRUE 0 0 NA A non_coding NA NA NA NA PB.6048.4 chr10 - 3812 20 incomplete-splice_match EIF3A ENST00000541549.2 4495 23 -56 739 internal_fragment FALSE canonical NA NA 252 None 10 7 0 FALSE 0 0 NA C coding 1153 3459 354 3812 PB.6735.10 chr11 + 2367 1 genic_intron novelGene_1115 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10589.1 chr21 + 1792 13 full-splice_match RRP1 ENST00000497547.1 3022 13 33 1197 no_subtype FALSE canonical NA NA 1207 None 22 5 0 FALSE 0 0 NA C coding 461 1383 85 1467 PB.7386.1 chr13 - 1420 1 novel_in_catalog CRYL1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.563.1 chr1 - 2016 12 full-splice_match DENND2D ENST00000357640.8 2077 12 43 18 no_subtype FALSE canonical NA NA 254 None 21 4 1 FALSE 0 0 NA C coding 471 1413 188 1600 PB.11170.1 chrX + 4440 17 full-splice_match SLC9A6 ENST00000370701.6 4755 17 300 15 no_subtype FALSE canonical NA NA 1776 None 4 9 1 FALSE 0 0 NA A coding 649 1947 100 2046 PB.3987.1 chr6 + 2860 6 full-splice_match RIMS1 ENST00000414192.2 1787 6 78 -1151 no_subtype TRUE canonical NA NA 553 None 18 13 0 FALSE 0 0 NA A coding 219 657 113 769 PB.5154.2 chr8 + 2696 1 full-splice_match ZNF623 ENST00000501748.3 6759 1 4056 7 no_subtype FALSE canonical NA NA NA None 4 36 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5154.1 chr8 + 2574 2 full-splice_match ZNF623 ENST00000526926.5 2612 2 33 5 no_subtype FALSE canonical NA NA 100 None 2 7 0 FALSE 0 0 NA C coding 496 1488 196 1683 PB.3388.1 chr5 + 3032 32 novel_not_in_catalog CAST novel NA NA NA NA no_subtype FALSE canonical NA NA 2442 None 4 5 0 TRUE 0 0 NA B coding 769 2307 110 2416 PB.6205.15 chr11 - 2507 17 novel_in_catalog EIF4G2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 236 None 2 3 0 FALSE 0 0 NA C coding 493 1479 941 2419 PB.7005.1 chr12 + 1452 2 antisense novelGene_CBX5_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 33 None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7780.3 chr14 - 3477 22 novel_not_in_catalog ACTN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 375 None 3 10 1 TRUE 0 0 NA B coding 793 2379 271 2649 PB.2079.3 chr3 + 3013 2 novel_in_catalog GPD1L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 81 None 2 6 0 FALSE 0 0 NA B coding 134 402 35 436 PB.3795.19 chr6 + 1524 13 novel_not_in_catalog BTN3A3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1477 None 2 13 1 TRUE 0 0 NA B coding 365 1095 250 1344 PB.6205.13 chr11 - 3667 21 novel_not_in_catalog EIF4G2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 221 None 3 3 1 TRUE 0 0 NA C coding 426 1278 1627 2904 PB.3795.16 chr6 + 2764 7 novel_not_in_catalog BTN3A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2587 None 5 9 2 TRUE 0 0 NA B coding 157 471 243 713 PB.3795.15 chr6 + 3014 12 novel_not_in_catalog BTN3A1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2537 None 5 16 3 TRUE 0 0 NA B coding 507 1521 280 1800 PB.9921.1 chr19 + 3625 2 full-splice_match CEBPG ENST00000284000.8 4109 2 475 9 no_subtype FALSE canonical NA NA 91 None 37 24 0 FALSE 0 0 NA A coding 150 450 188 637 PB.3795.13 chr6 + 2733 7 novel_not_in_catalog BTN3A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2556 None 8 6 0 TRUE 0 0 NA B coding 157 471 212 682 PB.3795.11 chr6 + 2784 7 novel_not_in_catalog BTN3A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2607 None 8 6 1 TRUE 0 0 NA B coding 157 471 263 733 PB.3795.10 chr6 + 3456 1 novel_in_catalog BTN2A2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA C coding 153 459 956 1414 PB.9299.8 chr17 - 1216 5 full-splice_match ICAM2 ENST00000418105.5 1252 5 34 2 no_subtype FALSE canonical NA NA 195 None 7 0 0 FALSE 0 0 NA C coding 275 825 240 1064 PB.9432.2 chr17 - 3586 9 full-splice_match FAAP100 ENST00000327787.12 3627 9 27 14 no_subtype FALSE canonical NA NA 185 None 12 10 0 FALSE 0 0 NA C coding 881 2643 21 2663 PB.9432.1 chr17 - 3794 9 novel_not_in_catalog FAAP100 novel NA NA NA NA no_subtype FALSE canonical NA NA 223 None 7 19 0 FALSE 0 0 NA C coding 730 2190 683 2872 PB.4909.4 chr8 + 3251 21 novel_not_in_catalog SPIDR novel NA NA NA NA no_subtype FALSE canonical NA NA 2648 None 2 8 0 TRUE 0 0 NA B coding 696 2088 702 2789 PB.3398.4 chr5 - 1735 3 full-splice_match ST8SIA4 ENST00000451528.2 1794 3 -58 117 no_subtype FALSE canonical NA NA 430 None 2 7 0 FALSE 0 0 NA C coding 168 504 318 821 PB.1177.1 chr2 + 1354 9 novel_not_in_catalog COLEC11 novel NA NA NA NA no_subtype TRUE canonical NA NA 633 None 2 8 0 TRUE 0 0 NA A coding 271 813 210 1022 PB.7785.1 chr14 + 5372 7 full-splice_match SLC39A9 ENST00000336643.9 3560 7 23 -1835 no_subtype FALSE canonical NA NA 1348 None 7 25 0 FALSE 0 0 NA C coding 307 921 656 1576 PB.6075.1 chr10 + 1526 8 novel_not_in_catalog LHPP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 894 None 17 6 0 TRUE 0 0 NA B coding 270 810 31 840 PB.9299.3 chr17 - 3009 6 novel_not_in_catalog ICAM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 85 None 15 10 1 TRUE 0 0 NA C coding 275 825 130 954 PB.2624.2 chr3 + 3184 13 novel_in_catalog EIF2B5 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 2765 None 2 20 2 FALSE 0 0 NA C coding 583 1749 21 1769 PB.9299.7 chr17 - 3012 6 novel_not_in_catalog ICAM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 84 None 3 10 1 TRUE 0 0 NA C coding 275 825 129 953 PB.6423.4 chr11 + 1460 1 novel_in_catalog VPS51 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C coding 116 348 26 373 PB.6423.5 chr11 + 3038 9 novel_in_catalog VPS51 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2658 None 4 6 0 FALSE 0 0 NA C coding 768 2304 13 2316 PB.7240.1 chr12 + 3022 13 full-splice_match TCHP ENST00000405876.8 3090 13 65 3 no_subtype FALSE canonical NA NA 1546 None 7 13 0 FALSE 0 0 NA C coding 498 1494 83 1576 PB.8399.2 chr16 - 3122 7 full-splice_match ZSCAN32 ENST00000396852.8 3169 7 44 3 no_subtype FALSE canonical NA NA 77 None 4 7 0 FALSE 0 0 NA C coding 696 2088 268 2355 PB.6423.1 chr11 + 2966 9 novel_in_catalog VPS51 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2589 None 2 6 0 FALSE 0 0 NA C coding 536 1608 137 1744 PB.6423.2 chr11 + 2486 10 full-splice_match VPS51 ENST00000279281.7 2714 10 75 153 no_subtype FALSE canonical NA NA 2105 None 29 2 0 FALSE 0 0 NA C coding 782 2346 18 2363 PB.8399.1 chr16 - 3032 6 novel_in_catalog ZSCAN32 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 81 None 2 9 0 FALSE 0 0 NA C coding 471 1413 852 2264 PB.10314.1 chr20 + 2003 13 full-splice_match HCK ENST00000518730.5 1742 13 71 -332 no_subtype FALSE canonical NA NA 1468 None 62 0 0 FALSE 0 0 NA C coding 504 1512 157 1668 PB.8772.1 chr16 + 2186 5 full-splice_match MLYCD ENST00000262430.5 13038 5 14 10838 no_subtype FALSE canonical NA NA 953 None 2 3 0 FALSE 0 0 NA A coding 493 1479 6 1484 PB.7959.204 chr14 - 1563 10 fusion IGHV1-24,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 100 None 2 24 6 TRUE 0 0 NA B coding 196 588 842 1429 PB.5398.3 chr9 - 3329 1 genic_intron novelGene_891 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6538.2 chr11 + 3483 2 genic_intron novelGene_710 novel NA NA NA NA no_subtype FALSE canonical NA NA 912 None 2 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2936.1 chr4 + 1895 3 novel_in_catalog AFF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 275 None 3 5 0 FALSE 0 0 NA B coding 376 1128 138 1265 PB.942.1 chr1 + 3225 2 antisense novelGene_DENND1B_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1621 None 2 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2563.2 chr3 - 2887 1 antisense novelGene_PPM1L_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2350.1 chr3 + 2690 1 novel_in_catalog ALCAM novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 15 16 0 FALSE 0 0 NA C coding 158 474 123 596 PB.5869.1 chr10 + 6804 3 genic_intron novelGene_736 novel NA NA NA NA no_subtype FALSE canonical NA NA 3622 None 4 31 1 FALSE 0 0 NA A coding 108 324 4115 4438 PB.2350.2 chr3 + 4692 16 full-splice_match ALCAM ENST00000306107.9 4701 16 6 3 no_subtype FALSE canonical NA NA 2271 None 3 12 0 FALSE 0 0 NA C coding 532 1596 648 2243 PB.2138.1 chr3 - 5665 1 genic_intron novelGene_449 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 28 0 FALSE 0 0 NA A coding 113 339 731 1069 PB.1918.1 chr2 + 2073 7 full-splice_match COPS7B ENST00000410024.5 1103 7 20 -990 no_subtype FALSE canonical NA NA 845 None 2 9 0 FALSE 0 0 NA A coding 264 792 210 1001 PB.6131.1 chr11 + 1512 12 novel_not_in_catalog LSP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1030 None 2 5 1 TRUE 0 0 NA C coding 294 882 42 923 PB.6131.2 chr11 + 1563 11 full-splice_match LSP1 ENST00000311604.7 1699 11 134 2 no_subtype FALSE canonical NA NA 1074 None 7 4 0 FALSE 0 0 NA C coding 339 1017 42 1058 PB.8385.1 chr16 + 1627 10 full-splice_match C16orf59 ENST00000361837.8 1662 10 29 6 no_subtype FALSE canonical NA NA 1191 None 2 2 0 FALSE 0 0 NA A coding 433 1299 37 1335 PB.2642.9 chr3 + 2867 7 novel_in_catalog SENP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1547 None 2 13 0 FALSE 0 0 NA C coding 218 654 954 1607 PB.2542.2 chr3 + 1869 1 incomplete-splice_match ARHGEF26 ENST00000483068.1 3106 5 1204 34 no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1411.2 chr2 + 3488 13 novel_in_catalog ZNF638 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2988 None 4 5 0 FALSE 0 0 NA C coding 918 2754 259 3012 PB.6397.1 chr11 + 1228 1 incomplete-splice_match RTN3 ENST00000537981.5 2532 7 1302 3 no_subtype FALSE canonical NA NA NA None 7 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2542.1 chr3 + 3846 18 novel_not_in_catalog ARHGEF26 novel NA NA NA NA no_subtype FALSE canonical NA NA 2639 None 10 9 0 TRUE 0 0 NA B coding 871 2613 167 2779 PB.5802.3 chr10 + 3522 2 genic_intron novelGene_606 novel NA NA NA NA no_subtype TRUE canonical NA NA 233 None 2 23 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1411.3 chr2 + 2962 1 novel_in_catalog ZNF638 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 9 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.364.7 chr1 - 2877 1 novel_in_catalog NRDC novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 7 15 0 FALSE 0 0 NA C coding 114 342 136 477 PB.8072.1 chr15 - 1610 11 incomplete-splice_match SECISBP2L ENST00000559471.5 7176 18 94 5472 internal_fragment FALSE canonical NA NA 194 None 2 1 0 FALSE 0 0 NA C coding 480 1440 171 1610 PB.4871.1 chr8 - 1947 9 novel_not_in_catalog TTI2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 190 None 5 8 1 TRUE 0 0 NA A coding 508 1524 369 1892 PB.8072.3 chr15 - 2867 1 novel_in_catalog SECISBP2L novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8072.4 chr15 - 3514 2 full-splice_match SECISBP2L ENST00000557923.1 546 2 -24 -2944 no_subtype FALSE canonical NA NA 195 None 2 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8072.5 chr15 - 2846 1 novel_in_catalog SECISBP2L novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 13 12 0 FALSE 0 0 NA C coding 33 99 546 644 PB.364.1 chr1 - 3630 31 full-splice_match NRDC ENST00000352171.11 3691 31 35 26 no_subtype FALSE canonical NA NA 496 None 152 2 0 FALSE 0 0 NA C coding 1151 3453 156 3608 PB.3620.5 chr5 - 3079 1 novel_in_catalog CLINT1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA C coding 110 330 308 637 PB.6516.1 chr11 + 1527 3 novel_not_in_catalog P2RY6 novel NA NA NA NA no_subtype FALSE canonical NA NA 210 None 4 1 0 FALSE 0 0 NA A coding 328 984 245 1228 PB.7915.1 chr14 + 1839 14 full-splice_match EVL ENST00000392920.7 1978 14 135 4 no_subtype FALSE canonical NA NA 1307 None 45 2 0 FALSE 0 0 NA C coding 418 1254 89 1342 PB.603.1 chr1 + 2743 2 novel_not_in_catalog PTGFRN novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1108 None 17 14 1 TRUE 0 0 NA A coding 114 342 149 490 PB.1411.1 chr2 + 3827 2 novel_in_catalog ZNF638 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 104 None 2 16 0 FALSE 0 0 NA C coding 466 1398 307 1704 PB.4034.2 chr6 - 2824 5 genic_intron novelGene_821 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2609 None 11 20 4 FALSE 0 0 NA B non_coding NA NA NA NA PB.9462.1 chr18 - 3079 10 full-splice_match COLEC12 ENST00000400256.4 5742 10 37 2626 no_subtype FALSE canonical NA NA 178 None 9 5 0 FALSE 0 0 NA A coding 742 2226 172 2397 PB.678.10 chr1 - 3428 7 novel_not_in_catalog RFX5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 256 None 2 20 1 TRUE 0 0 NA C coding 445 1335 549 1883 PB.10752.3 chr22 + 2609 17 novel_not_in_catalog EIF3L novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2588 None 2 8 1 TRUE 0 0 NA C coding 564 1692 32 1723 PB.10752.2 chr22 + 1809 12 novel_in_catalog EIF3L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1607 None 2 1 0 FALSE 0 0 NA C coding 456 1368 276 1643 PB.10752.1 chr22 + 1862 13 full-splice_match EIF3L ENST00000624234.3 2091 13 74 155 no_subtype FALSE canonical NA NA 1660 None 258 1 0 FALSE 0 0 NA C coding 564 1692 5 1696 PB.9849.1 chr19 + 847 2 full-splice_match KLF2 ENST00000592003.1 564 2 -19 -264 no_subtype FALSE canonical NA NA 178 None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10752.6 chr22 + 3797 16 full-splice_match MICALL1 ENST00000215957.10 4710 16 97 816 no_subtype FALSE canonical NA NA 2499 None 2 15 0 FALSE 0 0 NA A coding 863 2589 30 2618 PB.10752.4 chr22 + 1566 10 novel_in_catalog EIF3L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1365 None 2 1 0 FALSE 0 0 NA C coding 297 891 511 1401 PB.2119.2 chr3 + 2847 13 novel_not_in_catalog VIPR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1379 None 2 8 1 FALSE 0 0 NA B coding 433 1299 94 1392 PB.9230.1 chr17 + 3462 11 full-splice_match XYLT2 ENST00000017003.6 3507 11 43 2 no_subtype FALSE canonical NA NA 2281 None 9 7 0 FALSE 0 0 NA A coding 865 2595 7 2601 PB.2119.1 chr3 + 2711 12 novel_in_catalog VIPR1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1233 None 2 7 0 FALSE 0 0 NA B coding 443 1329 94 1422 PB.6407.2 chr11 + 1549 8 novel_in_catalog GPR137 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1201 None 2 3 0 FALSE 0 0 NA B coding 417 1251 171 1421 PB.6407.3 chr11 + 2833 6 novel_in_catalog GPR137 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2378 None 4 5 0 FALSE 0 0 NA B coding 172 516 2020 2535 PB.6407.1 chr11 + 1651 8 novel_in_catalog GPR137 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1197 None 4 5 0 FALSE 0 0 NA B coding 396 1188 167 1354 PB.8512.3 chr16 - 3219 19 full-splice_match ARHGAP17 ENST00000303665.9 3219 19 -9 9 no_subtype FALSE canonical NA NA 132 None 26 3 0 FALSE 0 0 NA C coding 803 2409 80 2488 PB.8512.2 chr16 - 3464 20 full-splice_match ARHGAP17 ENST00000289968.10 3461 20 -14 11 no_subtype FALSE canonical NA NA 137 None 15 6 0 FALSE 0 0 NA C coding 881 2643 85 2727 PB.8512.1 chr16 - 3503 21 novel_in_catalog ARHGAP17 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 118 None 2 2 0 FALSE 0 0 NA C coding 840 2520 66 2585 PB.1910.1 chr2 + 2094 10 novel_not_in_catalog CAB39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1568 None 3 6 1 TRUE 0 0 NA B coding 341 1023 132 1154 PB.8512.7 chr16 - 2862 19 novel_in_catalog ARHGAP17 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 149 None 3 3 0 FALSE 0 0 NA C coding 775 2325 97 2421 PB.8512.5 chr16 - 3305 20 novel_in_catalog ARHGAP17 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 164 None 10 4 0 FALSE 0 0 NA C coding 775 2325 112 2436 PB.8512.4 chr16 - 3068 18 novel_in_catalog ARHGAP17 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 145 None 2 1 0 FALSE 0 0 NA C coding 498 1494 93 1586 PB.6784.6 chr12 - 2719 16 novel_not_in_catalog NOP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 84 None 2 3 0 FALSE 0 0 NA C coding 812 2436 162 2597 PB.2137.2 chr3 + 5622 2 antisense novelGene_LARS2-AS1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1725 None 2 46 0 FALSE 0 0 NA A coding 108 324 104 427 PB.6784.4 chr12 - 2706 16 novel_not_in_catalog NOP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 84 None 32 6 0 FALSE 0 0 NA C coding 808 2424 162 2585 PB.6784.5 chr12 - 2655 16 full-splice_match NOP2 ENST00000541778.5 3038 16 379 4 no_subtype FALSE canonical NA NA 106 None 30 4 0 FALSE 0 0 NA C coding 808 2424 111 2534 PB.6784.2 chr12 - 2862 10 novel_not_in_catalog IFFO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 347 None 2 10 0 TRUE 0 0 NA B coding 200 600 1314 1913 PB.4173.1 chr6 + 1638 1 incomplete-splice_match PHACTR2 ENST00000427704.6 9531 13 7534 360 no_subtype FALSE canonical NA NA NA None 13 6 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6784.1 chr12 - 2758 12 novel_not_in_catalog IFFO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 358 None 2 8 0 TRUE 0 0 NA B coding 199 597 1211 1807 PB.8198.1 chr15 - 2952 1 full-splice_match NPTN-IT1 ENST00000628401.1 2283 1 -686 17 no_subtype FALSE canonical NA NA NA None 67 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7736.4 chr14 + 3965 3 genic_intron novelGene_569 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3818 None 2 27 0 FALSE 0 0 NA A coding 120 360 1084 1443 PB.7915.6 chr14 + 3895 1 novel_in_catalog EVL novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 22 0 FALSE 0 0 NA C coding 171 513 2742 3254 PB.7736.2 chr14 + 3024 25 novel_not_in_catalog DAAM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2920 None 7 0 0 TRUE 0 0 NA B coding 976 2928 95 3022 PB.7736.3 chr14 + 3766 27 novel_not_in_catalog DAAM1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3197 None 2 7 0 TRUE 0 0 NA B coding 1028 3084 321 3404 PB.7736.1 chr14 + 3730 26 novel_not_in_catalog DAAM1 novel NA NA NA NA no_subtype TRUE canonical NA NA 3161 None 2 7 0 TRUE 0 0 NA B coding 1068 3204 165 3368 PB.2257.6 chr3 - 5578 2 genic_intron novelGene_552 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1492 None 2 31 1 FALSE 0 0 NA A coding 139 417 703 1119 PB.4164.1 chr6 - 6496 1 novel_in_catalog HIVEP2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 34 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6159.9 chr11 - 586 3 novel_not_in_catalog HBB novel NA NA NA NA no_subtype FALSE canonical NA NA 104 None 6 1 0 FALSE 0 0 NA B coding 122 366 88 453 PB.5982.1 chr10 + 2819 9 intergenic novelGene_926 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2517 None 6 20 6 FALSE 0 0 NA A coding 106 318 1410 1727 PB.5412.1 chr9 - 1944 2 full-splice_match TMEM246 ENST00000374848.7 4244 2 130 2170 no_subtype FALSE canonical NA NA 115 None 17 1 0 FALSE 0 0 NA C coding 403 1209 193 1401 PB.6159.3 chr11 - 583 3 novel_not_in_catalog HBB novel NA NA NA NA no_subtype FALSE canonical NA NA 104 None 53 3 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6159.1 chr11 - 629 3 novel_not_in_catalog HBB novel NA NA NA NA no_subtype FALSE canonical NA NA 146 None 10837 1 1 FALSE 0 0 NA B coding 127 381 115 495 PB.6159.6 chr11 - 439 2 fusion HBD,HBB novel NA NA NA NA no_subtype FALSE canonical NA NA 185 None 5 1 0 FALSE 0 0 NA A coding 92 276 36 311 PB.5394.1 chr9 - 1513 5 novel_not_in_catalog TRMO novel NA NA NA NA no_subtype FALSE non_canonical NA NA 81 None 5 2 1 TRUE 0 0 NA A coding 362 1086 6 1091 PB.8224.1 chr15 - 1293 12 full-splice_match ETFA ENST00000557943.5 2287 12 26 968 no_subtype FALSE canonical NA NA 94 None 15 1 0 FALSE 0 0 NA C coding 333 999 56 1054 PB.9045.1 chr17 + 2969 19 full-splice_match RHOT1 ENST00000333942.10 3133 19 124 40 no_subtype FALSE canonical NA NA 1854 None 24 6 0 FALSE 0 0 NA C coding 618 1854 116 1969 PB.10791.1 chr22 + 5023 23 full-splice_match ZC3H7B ENST00000352645.4 5909 23 59 827 no_subtype FALSE canonical NA NA 2879 None 5 15 0 FALSE 0 0 NA A coding 977 2931 199 3129 PB.9045.3 chr17 + 2833 20 full-splice_match RHOT1 ENST00000394692.6 2960 20 -102 229 no_subtype FALSE canonical NA NA 1950 None 9 5 0 FALSE 0 0 NA C coding 650 1950 116 2065 PB.9045.2 chr17 + 3118 20 full-splice_match RHOT1 ENST00000545287.6 2516 20 9 -611 no_subtype FALSE canonical NA NA 2009 None 2 7 0 FALSE 0 0 NA C coding 659 1977 148 2124 PB.7959.205 chr14 - 1480 10 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 83 None 2 12 6 TRUE 0 0 NA B coding 196 588 759 1346 PB.9045.4 chr17 + 3508 18 full-splice_match RHOT1 ENST00000581094.5 3231 18 -81 -196 no_subtype FALSE canonical NA NA 1680 None 2 11 0 FALSE 0 0 NA C coding 580 1740 145 1884 PB.7959.207 chr14 - 1500 10 fusion IGHV4-34,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 82 None 2 16 6 TRUE 0 0 NA B coding 196 588 779 1366 PB.9938.1 chr19 + 3266 14 full-splice_match CD22 ENST00000085219.9 3268 14 1 1 no_subtype FALSE canonical NA NA 2477 None 37 8 0 FALSE 0 0 NA C coding 847 2541 66 2606 PB.7959.209 chr14 - 1519 10 fusion IGHV3-62,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 124 None 2 6 5 TRUE 0 0 NA B coding 196 588 798 1385 PB.7959.208 chr14 - 1506 11 fusion IGHV4-39,IGHG1,IGHV3-21,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 83 None 2 10 3 TRUE 0 0 NA A coding 196 588 785 1372 PB.4514.3 chr7 - 2876 10 novel_not_in_catalog HEPACAM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 99 None 4 10 0 TRUE 0 0 NA B coding 462 1386 21 1406 PB.3890.9 chr6 + 2764 6 novel_not_in_catalog PI16 novel NA NA NA NA no_subtype FALSE canonical NA NA 2318 None 4 9 1 FALSE 0 0 NA C coding 359 1077 263 1339 PB.3890.8 chr6 + 1445 2 novel_in_catalog PI16 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 435 None 2 5 0 FALSE 0 0 NA C coding 169 507 265 771 PB.7822.1 chr14 - 3062 1 incomplete-splice_match TMED10 ENST00000303575.8 4127 5 1056 10 no_subtype FALSE canonical NA NA NA None 8 24 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3890.5 chr6 + 2752 5 novel_in_catalog PI16 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 856 None 5 6 0 FALSE 0 0 NA C coding 445 1335 265 1599 PB.7959.72 chr14 - 1517 8 fusion IGHV3-62,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 124 None 2 20 3 TRUE 0 0 NA B coding 251 753 719 1471 PB.3890.6 chr6 + 5942 1 novel_in_catalog PI16 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 25 0 FALSE 0 0 NA C coding 99 297 265 561 PB.3890.1 chr6 + 2336 6 novel_in_catalog PI16 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1888 None 10 11 0 FALSE 0 0 NA C coding 445 1335 269 1603 PB.3890.3 chr6 + 1879 7 full-splice_match PI16 ENST00000373674.3 2190 7 304 7 no_subtype FALSE canonical NA NA 1434 None 8 6 0 FALSE 0 0 NA C coding 463 1389 25 1413 PB.3890.2 chr6 + 1300 7 novel_in_catalog PI16 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 854 None 83 3 0 FALSE 0 0 NA C coding 270 810 24 833 PB.7546.1 chr13 + 4492 7 full-splice_match MBNL2 ENST00000343600.8 4596 7 96 8 no_subtype FALSE canonical NA NA 1702 None 10 7 0 FALSE 0 0 NA C coding 361 1083 745 1827 PB.9059.1 chr17 + 1648 2 antisense novelGene_RAD51D_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1038 None 3 12 1 FALSE 0 0 NA B coding 119 357 1290 1646 PB.1747.3 chr2 + 2961 13 novel_not_in_catalog PMS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2605 None 2 5 0 TRUE 0 0 NA B coding 856 2568 133 2700 PB.9855.1 chr19 - 949 5 full-splice_match SMIM7 ENST00000487416.6 2776 5 1 1826 no_subtype FALSE canonical NA NA 72 None 4 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3241.1 chr5 - 2153 9 full-splice_match EMB ENST00000303221.9 4281 9 116 2012 no_subtype FALSE canonical NA NA 212 None 4 10 0 FALSE 0 0 NA C coding 327 981 101 1081 PB.1147.5 chr1 - 2942 13 novel_not_in_catalog CEP170 novel NA NA NA NA no_subtype FALSE canonical NA NA 241 None 3 1 0 TRUE 0 0 NA B coding 886 2658 283 2940 PB.7575.3 chr13 - 3033 6 novel_not_in_catalog ANKRD10 novel NA NA NA NA no_subtype FALSE canonical NA NA 303 None 4 11 0 FALSE 0 0 NA C coding 316 948 94 1041 PB.720.1 chr1 - 3141 23 full-splice_match THBS3 ENST00000368378.7 3145 23 0 4 no_subtype FALSE canonical NA NA 100 None 6 2 0 FALSE 0 0 NA C coding 956 2868 22 2889 PB.2905.9 chr4 - 5876 1 genic_intron novelGene_745 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 32 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.363.5 chr1 + 2691 21 novel_not_in_catalog OSBPL9 novel NA NA NA NA no_subtype FALSE canonical NA NA 1945 None 3 9 2 TRUE 0 0 NA B coding 470 1410 136 1545 PB.10671.3 chr22 + 2546 4 novel_not_in_catalog ADORA2A novel NA NA NA NA no_subtype FALSE canonical NA NA 777 None 11 3 0 FALSE 0 0 NA C coding 412 1236 446 1681 PB.10671.2 chr22 + 2620 4 novel_not_in_catalog ADORA2A novel NA NA NA NA no_subtype FALSE canonical NA NA 853 None 2 6 0 FALSE 0 0 NA C coding 412 1236 522 1757 PB.10671.1 chr22 + 2363 3 novel_in_catalog ADORA2A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 637 None 3 4 0 FALSE 0 0 NA C coding 412 1236 306 1541 PB.1076.4 chr1 - 2711 14 full-splice_match LBR ENST00000272163.8 3745 14 -18 1052 no_subtype FALSE canonical NA NA 100 None 177 4 0 FALSE 0 0 NA C coding 615 1845 115 1959 PB.10671.7 chr22 + 2678 4 novel_not_in_catalog ADORA2A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 914 None 2 11 1 TRUE 0 0 NA C coding 412 1236 583 1818 PB.8563.1 chr16 + 5779 10 incomplete-splice_match SRCAP ENST00000395059.6 9126 29 3737 -390 internal_fragment FALSE canonical NA NA 2704 None 2 7 0 FALSE 0 0 NA B coding 1251 3753 1634 5386 PB.10671.5 chr22 + 2606 4 novel_not_in_catalog ADORA2A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 838 None 3 6 1 TRUE 0 0 NA C coding 412 1236 507 1742 PB.10671.4 chr22 + 2510 3 full-splice_match ADORA2A ENST00000337539.11 2569 3 49 10 no_subtype FALSE canonical NA NA 742 None 6 3 0 FALSE 0 0 NA C coding 412 1236 411 1646 PB.634.1 chr1 + 2928 23 full-splice_match CHD1L ENST00000369258.8 2967 23 20 19 no_subtype FALSE canonical NA NA 2615 None 35 3 0 FALSE 0 0 NA C coding 897 2691 1 2691 PB.2632.1 chr3 + 3275 23 full-splice_match CHRD ENST00000204604.5 3521 23 241 5 no_subtype TRUE canonical NA NA 2817 None 2 9 2 FALSE 0 0 NA A coding 955 2865 6 2870 PB.6670.1 chr11 + 6058 1 genic_intron novelGene_1042 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 32 0 FALSE 0 0 NA A coding 116 348 4563 4910 PB.1555.1 chr2 + 1644 12 novel_not_in_catalog WASH2P novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1611 None 20 4 0 TRUE 0 0 NA B coding 266 798 645 1442 PB.3634.3 chr5 + 2866 7 novel_not_in_catalog RARS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2708 None 3 18 2 TRUE 0 0 NA B coding 147 441 18 458 PB.1395.1 chr2 - 3969 5 novel_not_in_catalog AAK1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 81 None 2 36 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.1147.2 chr1 - 5897 21 novel_not_in_catalog CEP170 novel NA NA NA NA no_subtype FALSE canonical NA NA 201 None 3 7 0 TRUE 0 0 NA B coding 1476 4428 243 4670 PB.4242.1 chr6 + 2715 1 genic_intron novelGene_1283 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1932.1 chr2 - 1436 1 full-splice_match ARL4C ENST00000390645.2 4013 1 434 2143 no_subtype FALSE canonical NA NA NA None 13 4 0 FALSE 0 0 NA A coding 192 576 34 609 PB.7388.1 chr13 - 3500 23 full-splice_match XPO4 ENST00000255305.10 9921 23 60 6361 no_subtype TRUE non_canonical NA NA 81 None 2 2 0 FALSE 0 0 NA A coding 1150 3450 16 3465 PB.4764.9 chr7 - 4156 28 novel_not_in_catalog KMT2C novel NA NA NA NA no_subtype FALSE canonical NA NA 108 None 3 3 0 TRUE 0 0 NA B coding 1349 4047 110 4156 PB.10164.14 chr19 - 1967 13 fusion LILRA6,LILRB3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 68 None 4 9 3 TRUE 0 0 NA B coding 346 1038 35 1072 PB.1867.2 chr2 - 1968 9 novel_not_in_catalog CNPPD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 29 None 6 5 1 FALSE 0 0 NA C coding 410 1230 49 1278 PB.2780.2 chr4 + 1534 11 full-splice_match RBPJ ENST00000348160.8 1752 11 208 10 no_subtype FALSE canonical NA NA 1169 None 2 2 1 FALSE 0 0 NA C coding 487 1461 22 1482 PB.2780.3 chr4 + 1699 1 incomplete-splice_match RBPJ ENST00000342320.8 5761 11 3849 214 no_subtype FALSE canonical NA NA NA None 6 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6855.1 chr12 + 3344 1 novel_in_catalog AEBP2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2780.1 chr4 + 2685 11 full-splice_match RBPJ ENST00000361572.10 1697 11 -814 -174 no_subtype FALSE canonical NA NA 2195 None 2 5 0 FALSE 0 0 NA C coding 389 1167 1342 2508 PB.5386.1 chr9 + 2912 16 novel_in_catalog ERCC6L2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2525 None 19 3 0 FALSE 0 0 NA B coding 867 2601 312 2912 PB.10483.2 chr20 - 6647 16 novel_not_in_catalog HELZ2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 175 None 2 19 0 TRUE 0 0 NA B coding 1832 5496 2 5497 PB.5386.2 chr9 + 5735 19 novel_in_catalog ERCC6L2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4022 None 6 11 0 FALSE 0 0 NA B coding 1561 4683 316 4998 PB.5589.1 chr9 - 3572 2 incomplete-splice_match SETX ENST00000224140.5 11100 26 7442 86 5prime_fragment FALSE canonical NA NA 28 None 2 24 0 FALSE 0 0 NA B coding 249 747 26 772 PB.5589.2 chr9 - 2734 1 incomplete-splice_match SETX ENST00000477049.1 4067 5 1248 86 no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6706.1 chr11 + 3550 14 full-splice_match UBASH3B ENST00000284273.5 6912 14 47 3315 no_subtype FALSE canonical NA NA 2140 None 2 15 0 FALSE 0 0 NA A coding 649 1947 329 2275 PB.9868.2 chr19 + 1246 1 incomplete-splice_match COLGALT1 ENST00000593832.1 2941 2 1688 8 no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9570.1 chr18 - 3105 2 full-splice_match MEX3C ENST00000406189.3 3781 2 664 12 no_subtype FALSE canonical NA NA 90 None 6 5 0 FALSE 0 0 NA A coding 372 1116 198 1313 PB.9868.1 chr19 + 3363 12 full-splice_match COLGALT1 ENST00000252599.8 3704 12 337 4 no_subtype FALSE canonical NA NA 1384 None 7 11 0 FALSE 0 0 NA C coding 529 1587 63 1649 PB.8278.1 chr15 - 1853 5 full-splice_match HAPLN3 ENST00000359595.7 1980 5 109 18 no_subtype FALSE canonical NA NA 59 None 4 4 0 FALSE 0 0 NA A coding 360 1080 107 1186 PB.3087.1 chr4 - 1562 1 incomplete-splice_match SH3D19 ENST00000478503.6 4038 13 2476 1 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1867.6 chr2 - 3134 5 novel_in_catalog CNPPD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 741 None 2 12 0 FALSE 0 0 NA C coding 116 348 852 1199 PB.4672.1 chr7 + 2688 2 genic_intron novelGene_1130 novel NA NA NA NA no_subtype FALSE canonical NA NA 384 None 9 21 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1026.1 chr1 + 2028 16 novel_in_catalog TRAF3IP3 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1776 None 14 1 0 FALSE 0 0 NA B coding 551 1653 214 1866 PB.1026.2 chr1 + 1838 13 novel_in_catalog TRAF3IP3 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1501 None 4 2 0 FALSE 0 0 NA B coding 446 1338 250 1587 PB.9345.2 chr17 + 1427 4 novel_not_in_catalog CD300A novel NA NA NA NA no_subtype FALSE canonical NA NA 54 None 2 5 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.1026.5 chr1 + 1169 10 novel_in_catalog TRAF3IP3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 917 None 8 1 0 FALSE 0 0 NA B coding 287 861 147 1007 PB.10998.1 chrX + 1404 1 full-splice_match MAGEH1 ENST00000342972.2 1462 1 49 9 no_subtype FALSE canonical NA NA NA None 10 8 0 FALSE 0 0 NA C coding 219 657 222 878 PB.9345.1 chr17 + 1595 7 full-splice_match CD300A ENST00000360141.7 1858 7 255 8 no_subtype FALSE canonical NA NA 807 None 28 3 0 FALSE 0 0 NA C coding 299 897 34 930 PB.290.2 chr1 + 2227 13 full-splice_match CAP1 ENST00000372792.6 1496 13 -20 -711 no_subtype FALSE canonical NA NA 1430 None 428 4 0 FALSE 0 0 NA C coding 475 1425 87 1511 PB.290.5 chr1 + 2156 12 novel_in_catalog CAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1359 None 209 3 0 FALSE 0 0 NA C coding 475 1425 16 1440 PB.7591.1 chr14 + 1840 16 full-splice_match PARP2 ENST00000429687.7 1881 16 34 7 no_subtype FALSE canonical NA NA 1579 None 20 1 0 FALSE 0 0 NA A coding 570 1710 27 1736 PB.7706.4 chr14 - 2520 16 full-splice_match ERO1A ENST00000395686.7 5285 16 147 2618 no_subtype FALSE canonical NA NA 191 None 24 4 0 FALSE 0 0 NA A coding 468 1404 78 1481 PB.7706.2 chr14 - 1871 2 antisense novelGene_RP11-841O20.2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 612 None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8930.1 chr17 - 1673 7 novel_not_in_catalog SCO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 298 None 34 6 0 TRUE 0 0 NA A coding 301 903 26 928 PB.8717.1 chr16 + 1725 13 novel_not_in_catalog DDX19A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1463 None 3 16 2 TRUE 0 0 NA C coding 295 885 638 1522 PB.1405.1 chr2 - 1712 3 full-splice_match FAM136A ENST00000037869.7 1810 3 90 8 no_subtype FALSE canonical NA NA 76 None 30 4 0 FALSE 0 0 NA A coding 123 369 35 403 PB.6869.2 chr12 - 4474 12 novel_not_in_catalog BCAT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 150 None 6 19 0 TRUE 0 0 NA B coding 386 1158 145 1302 PB.1087.1 chr1 - 2874 14 full-splice_match LIN9 ENST00000460719.5 2909 14 19 16 no_subtype FALSE canonical NA NA 45 None 2 9 0 FALSE 0 0 NA A coding 507 1521 15 1535 PB.6869.1 chr12 - 3045 1 incomplete-splice_match BCAT1 ENST00000261192.11 9674 11 5269 1361 no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9860.2 chr19 + 1368 9 full-splice_match BABAM1 ENST00000601043.5 1366 9 -8 6 no_subtype FALSE canonical NA NA 881 None 6 0 0 FALSE 0 0 NA C coding 329 987 96 1082 PB.2723.1 chr4 - 1447 8 full-splice_match LRPAP1 ENST00000500728.2 7819 8 118 6254 no_subtype TRUE canonical NA NA 233 None 96 3 0 FALSE 0 0 NA A coding 357 1071 30 1100 PB.9860.1 chr19 + 1393 9 novel_in_catalog BABAM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 898 None 43 0 0 FALSE 0 0 NA C coding 329 987 113 1099 PB.9359.1 chr17 - 946 4 full-splice_match SUMO2 ENST00000420826.6 3190 4 91 2153 no_subtype FALSE canonical NA NA 79 None 10 2 0 FALSE 0 0 NA A coding 95 285 59 343 PB.10114.6 chr19 + 2769 17 novel_in_catalog MED25 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2018 None 2 5 0 FALSE 0 0 NA C coding 745 2235 54 2288 PB.6849.1 chr12 - 1165 6 full-splice_match ARHGDIB ENST00000228945.8 1256 6 74 17 no_subtype FALSE canonical NA NA 59 None 109 3 0 FALSE 0 0 NA C coding 201 603 72 674 PB.6849.3 chr12 - 3763 5 novel_not_in_catalog ARHGDIB novel NA NA NA NA no_subtype FALSE canonical NA NA 59 None 8 16 0 TRUE 0 0 NA C coding 123 369 72 440 PB.6849.4 chr12 - 3818 4 full-splice_match ARHGDIB ENST00000535676.1 593 4 -4 -3221 no_subtype FALSE canonical NA NA 59 None 5 14 0 FALSE 0 0 NA C coding 123 369 72 440 PB.1050.1 chr1 + 2831 1 antisense novelGene_GPATCH2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.235 chr14 - 1560 11 fusion IGHV1-3,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 93 None 2 21 7 TRUE 0 0 NA B coding 229 687 747 1433 PB.2612.2 chr3 + 2845 1 novel_in_catalog ATP11B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6365.4 chr11 - 1642 1 incomplete-splice_match CPSF7 ENST00000439958.7 3524 10 1880 3 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4813.7 chr8 + 3081 15 novel_not_in_catalog INTS10 novel NA NA NA NA no_subtype FALSE canonical NA NA 1732 None 2 11 0 FALSE 0 0 NA C coding 622 1866 91 1956 PB.4813.6 chr8 + 2966 17 novel_not_in_catalog INTS10 novel NA NA NA NA no_subtype FALSE canonical NA NA 2559 None 2 4 0 FALSE 0 0 NA C coding 642 1926 91 2016 PB.4813.5 chr8 + 3947 16 novel_not_in_catalog INTS10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3353 None 2 7 0 TRUE 0 0 NA C coding 642 1926 123 2048 PB.9792.1 chr19 + 2865 9 novel_in_catalog WDR83 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 871 None 4 12 0 FALSE 0 0 NA A coding 315 945 74 1018 PB.4813.3 chr8 + 4164 17 novel_not_in_catalog INTS10 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3749 None 2 6 0 TRUE 0 0 NA C coding 642 1926 383 2308 PB.4813.2 chr8 + 3157 18 novel_not_in_catalog INTS10 novel NA NA NA NA no_subtype FALSE canonical NA NA 2741 None 3 3 1 TRUE 0 0 NA C coding 642 1926 383 2308 PB.4813.1 chr8 + 2463 17 full-splice_match INTS10 ENST00000397977.7 2804 17 327 14 no_subtype FALSE canonical NA NA 2047 None 21 1 0 FALSE 0 0 NA C coding 710 2130 72 2201 PB.10573.5 chr21 + 2677 17 novel_not_in_catalog MX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1999 None 58 8 0 TRUE 0 0 NA B coding 662 1986 239 2224 PB.5933.3 chr10 - 3393 19 novel_not_in_catalog ALDH18A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 164 None 13 6 0 TRUE 0 0 NA B coding 795 2385 193 2577 PB.6439.1 chr11 - 3536 10 full-splice_match MAP3K11 ENST00000309100.7 3566 10 24 6 no_subtype FALSE canonical NA NA 1201 None 146 4 0 FALSE 0 0 NA C coding 847 2541 463 3003 PB.10573.8 chr21 + 2644 17 novel_not_in_catalog MX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1966 None 20 6 0 TRUE 0 0 NA B coding 662 1986 206 2191 PB.2340.1 chr3 - 1619 5 incomplete-splice_match ABI3BP ENST00000470336.5 2984 18 1361 4 5prime_fragment FALSE canonical NA NA 32 None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9702.1 chr19 - 3826 15 novel_not_in_catalog DUS3L novel NA NA NA NA no_subtype FALSE canonical NA NA 130 None 2 7 0 FALSE 0 0 NA A coding 492 1476 2332 3807 PB.5933.4 chr10 - 3191 19 novel_not_in_catalog ALDH18A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 186 None 2 14 2 TRUE 0 0 NA B coding 684 2052 324 2375 PB.9033.1 chr17 - 1277 5 novel_not_in_catalog TEFM novel NA NA NA NA no_subtype FALSE canonical NA NA 48 None 2 3 0 TRUE 0 0 NA A coding 360 1080 18 1097 PB.1929.1 chr2 + 2371 7 novel_not_in_catalog UGT1A5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1334 None 6 11 0 TRUE 0 0 NA A coding 265 795 835 1629 PB.10810.1 chr22 - 1627 12 novel_not_in_catalog TTLL1 novel NA NA NA NA no_subtype TRUE canonical NA NA 137 None 2 1 0 TRUE 0 0 NA A coding 423 1269 227 1495 PB.5124.1 chr8 - 3479 6 incomplete-splice_match ASAP1 ENST00000524124.5 5478 24 1995 4 5prime_fragment FALSE canonical NA NA 38 None 2 7 0 FALSE 0 0 NA A coding 144 432 422 853 PB.1246.1 chr2 - 5426 1 genic_intron novelGene_277 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 37 0 FALSE 0 0 NA A coding 140 420 4836 5255 PB.5634.2 chr9 + 2806 12 novel_in_catalog MAN1B1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2014 None 4 8 0 FALSE 0 0 NA C coding 754 2262 36 2297 PB.5634.1 chr9 + 2608 13 full-splice_match MAN1B1 ENST00000371589.8 2769 13 154 7 no_subtype FALSE canonical NA NA 1815 None 99 4 0 FALSE 0 0 NA C coding 663 1989 28 2016 PB.9171.1 chr17 - 3334 30 novel_in_catalog ITGA2B novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 220 None 29 2 1 FALSE 0 0 NA A coding 724 2172 982 3153 PB.10383.4 chr20 + 5808 1 novel_in_catalog TOP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 39 0 FALSE 0 0 NA C coding 104 312 5446 5757 PB.7738.2 chr14 + 1622 7 full-splice_match JKAMP ENST00000425728.6 1636 7 14 0 no_subtype FALSE canonical NA NA 772 None 2 2 0 FALSE 0 0 NA C coding 305 915 74 988 PB.11072.1 chrX - 2777 1 genic_intron novelGene_888 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9726.3 chr19 - 3184 9 novel_not_in_catalog CD209 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 67 None 73 16 2 TRUE 0 0 NA B coding 381 1143 22 1164 PB.9726.2 chr19 - 3506 8 novel_not_in_catalog CD209 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 67 None 4 17 2 TRUE 0 0 NA B coding 357 1071 22 1092 PB.9726.1 chr19 - 3506 10 novel_not_in_catalog CD209 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 67 None 52 24 4 TRUE 0 0 NA B coding 135 405 689 1093 PB.8123.2 chr15 - 3894 9 novel_in_catalog BNIP2 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 186 None 2 27 0 FALSE 0 0 NA B coding 117 351 244 594 PB.6319.1 chr11 + 1344 5 novel_not_in_catalog FAM180B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1246 None 2 10 2 TRUE 0 0 NA A coding 201 603 46 648 PB.1479.3 chr2 - 3079 5 novel_not_in_catalog TMEM127 novel NA NA NA NA no_subtype FALSE canonical NA NA 138 None 19 20 1 TRUE 0 0 NA B coding 238 714 270 983 PB.1479.4 chr2 - 2667 4 novel_not_in_catalog TMEM127 novel NA NA NA NA no_subtype FALSE canonical NA NA 44 None 3 20 1 TRUE 0 0 NA B coding 154 462 53 514 PB.1479.5 chr2 - 1316 2 genic_intron novelGene_874 novel NA NA NA NA no_subtype FALSE canonical NA NA 419 None 2 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1479.6 chr2 - 2632 1 genic TMEM127 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA B coding 112 336 633 968 PB.9522.1 chr18 - 1285 1 incomplete-splice_match DSC2 ENST00000251081.6 4826 17 3534 8 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9522.3 chr18 - 3411 18 novel_not_in_catalog DSC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 407 None 2 6 0 TRUE 0 0 NA B coding 847 2541 339 2879 PB.9522.2 chr18 - 3358 17 novel_not_in_catalog DSC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 406 None 28 6 0 TRUE 0 0 NA B coding 901 2703 338 3040 PB.8279.2 chr15 - 2998 5 novel_in_catalog MFGE8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 133 None 2 20 1 FALSE 0 0 NA C coding 235 705 61 765 PB.2642.2 chr3 + 1435 10 novel_in_catalog SENP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 953 None 5 1 0 FALSE 0 0 NA C coding 319 957 85 1041 PB.10238.1 chr20 + 1008 4 full-splice_match MRPS26 ENST00000380325.3 1127 4 119 0 no_subtype FALSE canonical NA NA 488 None 7 6 0 FALSE 0 0 NA A coding 205 615 6 620 PB.502.1 chr1 - 1744 7 full-splice_match CNN3 ENST00000370206.8 2165 7 160 261 no_subtype FALSE canonical NA NA 281 None 45 4 0 FALSE 0 0 NA A coding 329 987 225 1211 PB.8714.1 chr16 - 1709 9 full-splice_match NOB1 ENST00000268802.9 1734 9 16 9 no_subtype TRUE canonical NA NA 77 None 29 4 0 FALSE 0 0 NA A coding 412 1236 15 1250 PB.2650.1 chr3 - 3581 1 genic DGKG novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 20 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3548.1 chr5 - 2603 20 novel_in_catalog FCHSD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 45 None 17 3 0 FALSE 0 0 NA A coding 688 2064 25 2088 PB.5506.2 chr9 - 3395 1 novel_in_catalog PPP6C novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4803.1 chr8 - 2994 10 full-splice_match MSR1 ENST00000262101.9 2132 10 59 -921 no_subtype FALSE canonical NA NA 59 None 10 10 0 FALSE 0 0 NA A coding 451 1353 64 1416 PB.8218.1 chr15 - 1379 9 full-splice_match SNUPN ENST00000308588.9 1513 9 116 18 no_subtype FALSE canonical NA NA 34 None 6 1 0 FALSE 0 0 NA A coding 360 1080 40 1119 PB.5593.1 chr9 + 1291 1 incomplete-splice_match SPACA9 ENST00000356311.9 2243 4 948 5 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5506.1 chr9 - 1537 7 full-splice_match PPP6C ENST00000373547.8 4118 7 23 2558 no_subtype FALSE canonical NA NA 152 None 40 4 0 FALSE 0 0 NA C coding 305 915 78 992 PB.1857.5 chr2 - 2954 8 novel_in_catalog TMBIM1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 245 None 2 7 0 FALSE 0 0 NA C coding 137 411 1269 1679 PB.2725.1 chr4 + 2838 8 full-splice_match ZBTB49 ENST00000337872.8 2889 8 48 3 no_subtype FALSE canonical NA NA 1694 None 4 6 0 FALSE 0 0 NA C coding 765 2295 74 2368 PB.7997.1 chr15 + 3227 2 novel_not_in_catalog PHGR1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 33 None 2 25 1 TRUE 0 0 NA A coding 111 333 1534 1866 PB.7466.1 chr13 - 1763 10 full-splice_match SLC25A30 ENST00000519676.5 3670 10 16 1891 no_subtype FALSE canonical NA NA 65 None 10 3 0 FALSE 0 0 NA A coding 291 873 121 993 PB.8235.2 chr15 + 2995 1 incomplete-splice_match IDH3A ENST00000299518.6 4128 11 1119 15 no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA C coding 127 381 1111 1491 PB.992.3 chr1 - 3286 14 full-splice_match RBBP5 ENST00000264515.10 4404 14 43 1075 no_subtype FALSE canonical NA NA 118 None 8 5 0 FALSE 0 0 NA C coding 538 1614 100 1713 PB.1217.6 chr2 - 2026 17 novel_not_in_catalog ITSN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 240 None 2 0 0 TRUE 0 0 NA B coding 583 1749 277 2025 PB.6439.2 chr11 - 2595 10 full-splice_match MAP3K11 ENST00000530153.5 2830 10 232 3 no_subtype FALSE canonical NA NA 258 None 2 5 0 FALSE 0 0 NA C coding 590 1770 291 2060 PB.4212.1 chr6 + 3670 2 genic_intron novelGene_1263 novel NA NA NA NA no_subtype FALSE canonical NA NA 2410 None 2 31 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9778.1 chr19 + 1386 13 novel_not_in_catalog CCDC159 novel NA NA NA NA no_subtype FALSE canonical NA NA 1318 None 2 0 0 FALSE 0 0 NA A coding 410 1230 91 1320 PB.5440.1 chr9 + 1419 9 full-splice_match UGCG ENST00000374279.3 4007 9 368 2220 no_subtype TRUE canonical NA NA 1096 None 7 1 0 FALSE 0 0 NA A coding 394 1182 83 1264 PB.3463.1 chr5 + 1179 7 full-splice_match PDLIM4 ENST00000253754.7 2282 7 -23 1126 no_subtype TRUE canonical NA NA 875 None 3 2 0 FALSE 0 0 NA A coding 330 990 88 1077 PB.2725.2 chr4 + 2833 7 novel_in_catalog ZBTB49 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1695 None 2 11 0 FALSE 0 0 NA C coding 420 1260 122 1381 PB.11098.1 chrX + 3139 3 novel_not_in_catalog KCTD9P2 novel NA NA NA NA no_subtype FALSE canonical NA NA 464 None 2 12 2 TRUE 0 0 NA A coding 110 330 987 1316 PB.1217.4 chr2 - 2266 18 novel_not_in_catalog ITSN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 232 None 2 2 0 TRUE 0 0 NA B coding 666 1998 269 2266 PB.9243.1 chr17 + 1865 14 full-splice_match UTP18 ENST00000225298.11 1894 14 23 6 no_subtype FALSE canonical NA NA 1719 None 14 3 1 FALSE 0 0 NA A coding 556 1668 35 1702 PB.9718.2 chr19 + 1489 1 incomplete-splice_match CTD-2207O23.3 ENST00000617428.2 4964 22 3474 2 no_subtype FALSE canonical NA NA NA None 5 8 0 FALSE 0 0 NA A coding 112 336 178 513 PB.4899.1 chr8 + 1276 14 full-splice_match POLB ENST00000265421.8 1329 14 41 12 no_subtype FALSE canonical NA NA 1042 None 2 3 0 FALSE 0 0 NA A coding 335 1005 130 1134 PB.6157.1 chr11 - 829 1 incomplete-splice_match TRIM68 ENST00000300747.9 3352 7 2515 9 no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6157.2 chr11 - 3302 7 full-splice_match TRIM68 ENST00000300747.9 3352 7 41 9 no_subtype FALSE canonical NA NA 192 None 2 23 0 FALSE 0 0 NA C coding 485 1455 250 1704 PB.9053.1 chr17 - 1488 2 genic_intron novelGene_325 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 58 None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9165.3 chr17 - 3387 11 incomplete-splice_match ATXN7L3 ENST00000389384.8 3811 12 421 3 5prime_fragment FALSE canonical NA NA 72 None 2 5 0 FALSE 0 0 NA A coding 290 870 60 929 PB.3830.1 chr6 + 2469 18 novel_not_in_catalog CFB novel NA NA NA NA no_subtype TRUE canonical NA NA 2265 None 2 1 0 FALSE 0 0 NA A coding 763 2289 130 2418 PB.5654.2 chr10 - 6151 1 novel_in_catalog KLF6 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 30 0 FALSE 0 0 NA C coding 281 843 2894 3736 PB.9683.1 chr19 + 1769 13 full-splice_match FSD1 ENST00000221856.10 1831 13 67 -5 no_subtype FALSE canonical NA NA 1460 None 2 3 0 FALSE 0 0 NA A coding 496 1488 81 1568 PB.1542.1 chr2 - 5719 1 full-splice_match MIR4435-2,RP11-803D5.1 ENST00000622940.1 3380 1 125 -2464 no_subtype FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA A coding 51 153 186 338 PB.4596.1 chr7 - 2764 1 genic_intron novelGene_961 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3175.1 chr5 + 5624 3 genic_intron novelGene_65 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3784 None 2 41 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1711.1 chr2 - 4066 13 full-splice_match ATF2 ENST00000345739.9 4079 13 -2 15 no_subtype FALSE canonical NA NA 159 None 8 15 0 FALSE 0 0 NA C coding 442 1326 394 1719 PB.1711.3 chr2 - 3634 3 novel_not_in_catalog ATF2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 65 None 2 15 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.1711.2 chr2 - 4143 14 full-splice_match ATF2 ENST00000264110.6 4176 14 18 15 no_subtype FALSE canonical NA NA 139 None 18 16 0 FALSE 0 0 NA C coding 505 1515 282 1796 PB.7511.1 chr13 + 5810 6 novel_not_in_catalog PCDH17 novel NA NA NA NA no_subtype FALSE canonical NA NA 5130 None 2 13 0 TRUE 0 0 NA A coding 1159 3477 2334 5810 PB.4294.1 chr7 + 2956 12 full-splice_match MIOS ENST00000405785.5 3095 12 136 3 no_subtype FALSE canonical NA NA 2731 None 2 1 0 FALSE 0 0 NA A coding 875 2625 201 2825 PB.4643.10 chr7 + 1463 1 genic_intron novelGene_1102 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4643.11 chr7 + 2892 2 genic_intron novelGene_1103 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1646 None 2 33 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4643.12 chr7 + 1487 8 novel_in_catalog SND1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 890 None 2 3 0 FALSE 0 0 NA C coding 310 930 24 953 PB.5225.2 chr9 - 3401 1 genic_intron novelGene_110 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1967.1 chr2 + 2512 11 novel_not_in_catalog D2HGDH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2123 None 2 15 1 TRUE 0 0 NA A coding 521 1563 148 1710 PB.1723.2 chr2 - 3127 20 full-splice_match CWC22 ENST00000404136.2 2392 20 8 -743 no_subtype TRUE canonical NA NA 36 None 30 3 1 FALSE 0 0 NA A coding 908 2724 150 2873 PB.2747.1 chr4 - 2697 1 genic_intron novelGene_76 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A coding 109 327 1536 1862 PB.4327.1 chr7 + 2601 12 novel_not_in_catalog GPNMB novel NA NA NA NA no_subtype FALSE canonical NA NA 1563 None 163 4 0 TRUE 0 0 NA B coding 560 1680 41 1720 PB.4327.2 chr7 + 3973 7 novel_in_catalog GPNMB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1105 None 2 12 0 FALSE 0 0 NA B coding 380 1140 88 1227 PB.11135.1 chrX - 6664 3 genic LAMP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3751 None 2 37 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.3169.1 chr5 - 4119 1 antisense novelGene_PAPD7_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5741.1 chr10 - 2744 1 genic_intron novelGene_335 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2584.1 chr3 - 2116 1 genic_intron novelGene_1311 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A coding 146 438 939 1376 PB.2353.3 chr3 - 3647 18 novel_in_catalog CBLB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 254 None 16 5 0 FALSE 0 0 NA C coding 938 2814 269 3082 PB.3497.1 chr5 + 2676 17 full-splice_match TGFBI ENST00000442011.6 2804 17 126 2 no_subtype TRUE canonical NA NA 2046 None 130 3 0 FALSE 0 0 NA A coding 683 2049 36 2084 PB.3360.3 chr5 + 2053 3 novel_not_in_catalog VCAN novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1164 None 2 8 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.3360.2 chr5 + 2698 3 novel_in_catalog VCAN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 381 None 28 9 0 FALSE 0 0 NA C coding 111 333 456 788 PB.3360.1 chr5 + 1368 7 full-splice_match VCAN ENST00000513960.5 3973 7 81 2524 no_subtype FALSE canonical NA NA 1214 None 21 2 0 FALSE 0 0 NA C coding 350 1050 317 1366 PB.7796.1 chr14 + 2894 12 novel_not_in_catalog PSEN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1630 None 2 5 0 TRUE 0 0 NA B coding 463 1389 395 1783 PB.3360.7 chr5 + 2990 1 genic_intron novelGene_764 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3360.6 chr5 + 5971 3 genic_intron novelGene_764 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5689 None 2 28 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.7944.1 chr14 - 1417 8 full-splice_match CKB ENST00000348956.6 1709 8 278 14 no_subtype FALSE canonical NA NA 68 None 75 1 0 FALSE 0 0 NA A coding 381 1143 81 1223 PB.5468.2 chr9 - 2808 5 novel_not_in_catalog TNFSF8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 451 None 44 10 1 TRUE 0 0 NA A coding 234 702 257 958 PB.6727.2 chr11 + 1913 4 genic FOXRED1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1770 None 2 10 0 TRUE 0 0 NA C coding 101 303 51 353 PB.6727.1 chr11 + 1918 11 full-splice_match FOXRED1 ENST00000263578.9 1970 11 52 0 no_subtype FALSE canonical NA NA 1228 None 14 4 0 FALSE 0 0 NA C coding 486 1458 23 1480 PB.681.2 chr1 - 2772 7 antisense novelGene_SNX27_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2309 None 5 21 3 FALSE 0 0 NA B coding 114 342 1244 1585 PB.6727.7 chr11 + 1178 6 full-splice_match DCPS ENST00000263579.4 1479 6 302 -1 no_subtype FALSE canonical NA NA 774 None 3 1 0 FALSE 0 0 NA A coding 337 1011 28 1038 PB.6727.4 chr11 + 1892 11 novel_not_in_catalog FOXRED1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1202 None 2 6 1 FALSE 0 0 NA C coding 468 1404 51 1454 PB.2941.1 chr4 + 1558 8 full-splice_match NUDT9 ENST00000302174.8 1701 8 139 4 no_subtype FALSE canonical NA NA 1059 None 9 4 0 FALSE 0 0 NA A coding 350 1050 186 1235 PB.9427.1 chr17 + 2029 15 novel_not_in_catalog BAIAP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1643 None 2 7 0 TRUE 0 0 NA A coding 521 1563 109 1671 PB.3905.1 chr6 + 3781 10 full-splice_match NFYA ENST00000341376.10 3811 10 24 6 no_subtype FALSE canonical NA NA 1167 None 2 17 1 FALSE 0 0 NA A coding 347 1041 178 1218 PB.5786.1 chr10 - 1563 8 novel_in_catalog ZWINT novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 74 None 14 8 0 FALSE 0 0 NA C coding 282 846 34 879 PB.5786.2 chr10 - 1826 8 full-splice_match ZWINT ENST00000395405.5 1851 8 15 10 no_subtype TRUE canonical NA NA 63 None 2 12 0 FALSE 0 0 NA C coding 277 831 23 853 PB.1618.1 chr2 + 5792 1 antisense novelGene_RP11-570L15.1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 30 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6451.2 chr11 + 2568 4 genic_intron novelGene_621 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2264 None 8 29 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.9111.4 chr17 - 3541 26 novel_not_in_catalog TOP2A novel NA NA NA NA no_subtype FALSE canonical NA NA 147 None 6 2 1 FALSE 0 0 NA B coding 940 2820 722 3541 PB.9111.3 chr17 - 3818 28 novel_not_in_catalog TOP2A novel NA NA NA NA no_subtype FALSE canonical NA NA 147 None 23 2 1 FALSE 0 0 NA B coding 1032 3096 722 3817 PB.9111.2 chr17 - 3877 29 novel_not_in_catalog TOP2A novel NA NA NA NA no_subtype FALSE canonical NA NA 122 None 7 2 1 FALSE 0 0 NA B coding 1060 3180 697 3876 PB.9111.1 chr17 - 5721 35 novel_not_in_catalog TOP2A novel NA NA NA NA no_subtype FALSE canonical NA NA 147 None 7 7 2 FALSE 0 0 NA B coding 1168 3504 722 4225 PB.10545.1 chr21 - 2773 1 genic_intron novelGene_338 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5854.4 chr10 - 7461 2 novel_not_in_catalog CAMK2G novel NA NA NA NA no_subtype FALSE canonical NA NA 3374 None 2 36 1 TRUE 0 0 NA B coding 101 303 1185 1487 PB.6946.3 chr12 - 2814 1 novel_in_catalog PRKAG1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5854.2 chr10 - 5906 1 novel_in_catalog CAMK2G novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA B coding 107 321 1263 1583 PB.5854.1 chr10 - 1865 20 novel_in_catalog CAMK2G novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 159 None 8 0 0 FALSE 0 0 NA B coding 518 1554 95 1648 PB.10926.1 chrX - 2644 1 full-splice_match RP11-204C16.4 ENST00000405276.2 735 1 -12 -1897 no_subtype FALSE canonical NA NA NA None 4 10 0 FALSE 0 0 NA A coding 245 735 13 747 PB.7530.1 chr13 + 2650 4 full-splice_match CLN5 ENST00000377453.8 2629 4 -13 -8 no_subtype FALSE canonical NA NA 593 None 32 8 0 FALSE 0 0 NA A coding 358 1074 29 1102 PB.1671.1 chr2 - 3178 11 novel_not_in_catalog GALNT3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 214 None 24 5 1 TRUE 0 0 NA A coding 633 1899 312 2210 PB.3980.6 chr6 - 2661 2 antisense novelGene_PTP4A1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 29 None 23 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5755.8 chr10 - 2181 4 full-splice_match HNRNPF ENST00000357065.8 2617 4 29 407 no_subtype FALSE canonical NA NA 74 None 2 5 0 FALSE 0 0 NA C coding 414 1242 324 1565 PB.10108.1 chr19 + 1441 7 full-splice_match RCN3 ENST00000270645.7 1859 7 408 10 no_subtype FALSE canonical NA NA 918 None 2 6 0 FALSE 0 0 NA A coding 327 981 43 1023 PB.10438.1 chr20 - 1856 4 full-splice_match UBE2V1 ENST00000371674.7 2133 4 27 250 no_subtype FALSE canonical NA NA 40 None 52 3 0 FALSE 0 0 NA C coding 147 441 19 459 PB.10438.2 chr20 - 1712 3 full-splice_match UBE2V1 ENST00000396059.7 1983 3 22 249 no_subtype FALSE canonical NA NA 44 None 7 3 1 FALSE 0 0 NA C coding 58 174 141 314 PB.5755.1 chr10 - 2104 3 novel_not_in_catalog HNRNPF novel NA NA NA NA no_subtype FALSE canonical NA NA 56 None 5 2 0 FALSE 0 0 NA C coding 414 1242 247 1488 PB.7604.1 chr14 - 6115 30 incomplete-splice_match CHD8 ENST00000430710.7 7420 38 1307 -2 5prime_fragment FALSE canonical NA NA 90 None 2 6 0 FALSE 0 0 NA B coding 1877 5631 61 5691 PB.5755.3 chr10 - 1864 1 incomplete-splice_match HNRNPF ENST00000357065.8 2617 4 520 234 no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA C coding 347 1041 35 1075 PB.9096.1 chr17 + 4471 28 novel_not_in_catalog ERBB2 novel NA NA NA NA no_subtype TRUE canonical NA NA 3586 None 14 3 0 TRUE 0 0 NA A coding 1255 3765 175 3939 PB.5755.4 chr10 - 1970 2 novel_in_catalog HNRNPF novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 61 None 7 3 0 FALSE 0 0 NA C coding 414 1242 117 1358 PB.5755.7 chr10 - 2161 4 novel_not_in_catalog HNRNPF novel NA NA NA NA no_subtype FALSE non_canonical NA NA 51 None 4 4 0 TRUE 0 0 NA C coding 414 1242 304 1545 PB.5755.6 chr10 - 2142 3 novel_in_catalog HNRNPF novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 98 None 8 3 0 FALSE 0 0 NA C coding 414 1242 289 1530 PB.9365.8 chr17 + 2851 6 genic_intron novelGene_705 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2553 None 19 25 5 FALSE 0 0 NA B non_coding NA NA NA NA PB.9676.2 chr19 + 3051 21 novel_not_in_catalog TJP3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2821 None 54 7 1 TRUE 0 0 NA B coding 923 2769 153 2921 PB.3181.2 chr5 - 3372 1 antisense novelGene_MARCH6_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3181.1 chr5 - 2739 1 genic_intron novelGene_73 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7964.1 chr15 - 3716 24 novel_not_in_catalog TUBGCP5 novel NA NA NA NA no_subtype FALSE canonical NA NA 162 None 11 7 0 TRUE 0 0 NA B coding 1024 3072 17 3088 PB.9365.1 chr17 + 5520 2 genic RP11-16C1.3 novel NA NA NA NA no_subtype FALSE canonical NA NA 5057 None 5 37 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.7964.3 chr15 - 1660 12 novel_not_in_catalog TUBGCP5 novel NA NA NA NA no_subtype FALSE canonical NA NA 153 None 2 2 0 TRUE 0 0 NA B coding 463 1389 8 1396 PB.4337.1 chr7 + 2445 7 full-splice_match SNX10 ENST00000338523.8 2546 7 91 10 no_subtype FALSE canonical NA NA 620 None 3 13 0 FALSE 0 0 NA A coding 201 603 97 699 PB.9365.4 chr17 + 2834 5 genic_intron novelGene_705 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2053 None 2 31 4 FALSE 0 0 NA B non_coding NA NA NA NA PB.1138.1 chr1 + 2635 21 incomplete-splice_match MTR ENST00000366577.9 10529 33 7 7887 3prime_fragment FALSE canonical NA NA 2583 None 4 1 0 FALSE 0 0 NA B coding 749 2247 388 2634 PB.5278.3 chr9 - 3031 9 full-splice_match FAM214B ENST00000322813.9 3028 9 -10 7 no_subtype FALSE canonical NA NA 102 None 16 10 0 FALSE 0 0 NA C coding 538 1614 322 1935 PB.5278.2 chr9 - 3144 9 full-splice_match FAM214B ENST00000378557.1 3070 9 -56 -18 no_subtype TRUE canonical NA NA 211 None 2 12 0 FALSE 0 0 NA C coding 538 1614 431 2044 PB.4554.5 chr7 - 5421 1 novel_in_catalog TSC22D4 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 12 31 0 FALSE 0 0 NA C coding 259 777 1191 1967 PB.6612.1 chr11 - 1807 10 full-splice_match MMP3 ENST00000299855.9 2016 10 199 10 no_subtype TRUE canonical NA NA 163 None 3 3 0 FALSE 0 0 NA A coding 477 1431 59 1489 PB.1903.3 chr2 - 1655 1 genic_intron novelGene_1408 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 17 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8480.2 chr16 - 1410 5 novel_not_in_catalog THUMPD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 287 None 2 1 0 FALSE 0 0 NA C coding 353 1059 57 1115 PB.8480.1 chr16 - 2632 4 full-splice_match THUMPD1 ENST00000396083.6 2624 4 -34 26 no_subtype FALSE canonical NA NA 322 None 46 9 0 FALSE 0 0 NA C coding 353 1059 92 1150 PB.5323.1 chr9 - 1772 14 novel_not_in_catalog ALDH1A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 119 None 59 1 0 TRUE 0 0 NA B coding 501 1503 54 1556 PB.333.1 chr1 + 5715 5 genic PLK3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4544 None 2 25 4 TRUE 0 0 NA A coding 124 372 2907 3278 PB.8821.1 chr16 + 3073 11 full-splice_match GAS8 ENST00000268699.8 3185 11 93 19 no_subtype FALSE canonical NA NA 1316 None 5 15 1 FALSE 0 0 NA A coding 478 1434 30 1463 PB.3407.5 chr5 - 3929 10 full-splice_match PJA2 ENST00000361189.6 4889 10 62 898 no_subtype FALSE canonical NA NA 91 None 8 5 0 FALSE 0 0 NA C coding 708 2124 179 2302 PB.3407.4 chr5 - 3027 5 incomplete-splice_match PJA2 ENST00000361557.4 4645 9 1611 7 5prime_fragment FALSE canonical NA NA 41 None 4 9 0 FALSE 0 0 NA C coding 132 396 118 513 PB.4701.1 chr7 - 1271 2 novel_not_in_catalog ZC3HAV1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 299 None 2 3 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.2013.7 chr3 - 3692 1 genic_intron novelGene_108 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A coding 103 309 1725 2033 PB.8307.1 chr15 + 2746 2 genic_intron novelGene_841 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 184 None 2 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7332.1 chr12 + 1741 2 antisense novelGene_LINC01089_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1200 None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5874.1 chr10 + 1527 4 genic SFTPD-AS1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1332 None 2 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.11103.2 chrX + 5942 1 genic_intron novelGene_972 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA A coding 113 339 4746 5084 PB.2955.1 chr4 - 3379 2 full-splice_match GPRIN3 ENST00000609438.1 14244 2 -36 10901 no_subtype FALSE canonical NA NA 432 None 2 4 0 FALSE 0 0 NA C coding 776 2328 556 2883 PB.5258.1 chr9 - 1695 12 full-splice_match SMU1 ENST00000397149.3 7122 12 18 5409 no_subtype TRUE canonical NA NA 59 None 15 4 0 FALSE 0 0 NA A coding 513 1539 34 1572 PB.10430.1 chr20 - 1794 2 antisense novelGene_NCOA3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 217 None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10430.2 chr20 - 2622 2 genic SULF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 13 None 16 27 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.6603.9 chr11 - 2529 1 genic_intron novelGene_876 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9664.2 chr19 - 2088 3 genic AC005262.2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1442 None 14 23 2 TRUE 0 0 NA B coding 236 708 1079 1786 PB.7093.1 chr12 + 2959 1 incomplete-splice_match MSRB3 ENST00000614640.4 4270 7 1311 1 no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5957.1 chr10 + 3005 12 novel_not_in_catalog ZFYVE27 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1349 None 40 15 1 TRUE 0 0 NA C coding 315 945 195 1139 PB.5957.3 chr10 + 2995 12 novel_in_catalog ZFYVE27 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1342 None 12 14 0 FALSE 0 0 NA C coding 409 1227 178 1404 PB.8686.1 chr16 - 2773 6 novel_not_in_catalog PSMB10 novel NA NA NA NA no_subtype FALSE canonical NA NA 157 None 2 22 1 TRUE 0 0 NA C coding 161 483 102 584 PB.9505.1 chr18 + 1711 4 full-splice_match SNRPD1 ENST00000300413.9 4909 4 84 3114 no_subtype FALSE canonical NA NA 362 None 11 4 0 FALSE 0 0 NA A coding 119 357 80 436 PB.9975.5 chr19 - 2580 6 novel_in_catalog HNRNPL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 241 None 3 11 0 FALSE 0 0 NA C coding 280 840 68 907 PB.9975.6 chr19 - 2624 2 genic AC008982.2 novel NA NA NA NA no_subtype FALSE canonical NA NA 210 None 2 12 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.9603.1 chr18 + 1690 1 genic_intron novelGene_700 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9975.3 chr19 - 1870 13 full-splice_match HNRNPL ENST00000600873.5 1633 13 -9 -228 no_subtype FALSE canonical NA NA 52 None 12 5 0 FALSE 0 0 NA C coding 456 1368 185 1552 PB.9975.2 chr19 - 2058 13 full-splice_match HNRNPL ENST00000221419.9 2471 13 396 17 no_subtype FALSE canonical NA NA 238 None 14 5 0 FALSE 0 0 NA C coding 558 1674 65 1738 PB.8031.3 chr15 + 2809 7 novel_not_in_catalog HAUS2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1360 None 2 17 2 TRUE 0 0 NA C coding 235 705 21 725 PB.8031.2 chr15 + 1761 6 full-splice_match HAUS2 ENST00000260372.7 3949 6 36 2152 no_subtype FALSE canonical NA NA 525 None 8 5 0 FALSE 0 0 NA C coding 235 705 28 732 PB.8031.1 chr15 + 3839 6 novel_not_in_catalog HAUS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 461 None 2 22 0 FALSE 0 0 NA C coding 200 600 69 668 PB.4885.1 chr8 + 2638 9 novel_in_catalog PLEKHA2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 902 None 2 12 0 FALSE 0 0 NA B coding 209 627 348 974 PB.11039.2 chrX - 2360 16 full-splice_match ABCB7 ENST00000253577.7 2377 16 14 3 no_subtype FALSE canonical NA NA 179 None 13 0 0 FALSE 0 0 NA C coding 753 2259 12 2270 PB.2019.8 chr3 + 5585 2 novel_not_in_catalog SLC6A6 novel NA NA NA NA no_subtype FALSE canonical NA NA 4892 None 2 26 1 TRUE 0 0 NA B coding 161 483 137 619 PB.8789.1 chr16 + 4058 14 novel_not_in_catalog GSE1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2986 None 7 11 1 TRUE 0 0 NA B coding 689 2067 1052 3118 PB.8789.3 chr16 + 2737 1 incomplete-splice_match GSE1 ENST00000469381.1 5885 5 3147 2 no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7865.2 chr14 - 1076 1 novel_in_catalog TRIP11 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA B coding 101 303 47 349 PB.2019.3 chr3 + 6474 16 novel_not_in_catalog SLC6A6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1995 None 9 28 0 TRUE 0 0 NA B coding 620 1860 274 2133 PB.2019.2 chr3 + 1540 2 novel_in_catalog SLC6A6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 242 None 3 6 0 FALSE 0 0 NA B coding 8 24 312 335 PB.2019.1 chr3 + 5621 6 novel_in_catalog SLC6A6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 879 None 9 28 0 FALSE 0 0 NA B coding 285 855 281 1135 PB.2019.7 chr3 + 1358 2 novel_not_in_catalog SLC6A6 novel NA NA NA NA no_subtype TRUE canonical NA NA 674 None 10 7 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.2019.6 chr3 + 2306 2 genic_intron novelGene_117 novel NA NA NA NA no_subtype FALSE canonical NA NA 1067 None 4 13 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.4383.1 chr7 - 4210 29 full-splice_match VPS41 ENST00000310301.8 5903 29 42 1651 no_subtype TRUE canonical NA NA 34 None 8 7 0 FALSE 0 0 NA C coding 854 2562 14 2575 PB.2019.4 chr3 + 6462 17 novel_not_in_catalog SLC6A6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4511 None 19 30 1 TRUE 0 0 NA B coding 620 1860 276 2135 PB.4526.2 chr7 - 4239 25 novel_in_catalog TECPR1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 71 None 3 8 0 FALSE 0 0 NA B coding 1165 3495 91 3585 PB.3556.11 chr5 + 2905 2 genic_intron novelGene_1202 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 20 None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3556.13 chr5 + 5495 3 novel_not_in_catalog ARHGAP26 novel NA NA NA NA no_subtype FALSE canonical NA NA 3780 None 2 42 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.6916.1 chr12 + 5849 21 full-splice_match ARID2 ENST00000334344.10 8642 21 29 2764 no_subtype FALSE canonical NA NA 5506 None 11 3 0 FALSE 0 0 NA A coding 1835 5505 144 5648 PB.6375.1 chr11 - 3480 5 full-splice_match AHNAK ENST00000378024.8 18787 5 30 15277 no_subtype FALSE canonical NA NA 146 None 7 6 0 FALSE 0 0 NA C coding 1078 3234 246 3479 PB.5286.1 chr9 - 3396 17 full-splice_match GBA2 ENST00000378103.7 3611 17 208 7 no_subtype TRUE canonical NA NA 675 None 25 2 0 FALSE 0 0 NA A coding 927 2781 317 3097 PB.8317.1 chr15 - 2732 5 genic_intron novelGene_889 novel NA NA NA NA no_subtype TRUE canonical NA NA 1346 None 2 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.11096.1 chrX - 2911 2 novel_not_in_catalog SLC25A53 novel NA NA NA NA no_subtype FALSE canonical NA NA 73 None 4 13 0 FALSE 0 0 NA A coding 307 921 105 1025 PB.621.3 chr1 + 1542 12 full-splice_match POLR3C ENST00000369294.5 1590 12 46 2 no_subtype FALSE canonical NA NA 1389 None 2 2 0 FALSE 0 0 NA C coding 411 1233 169 1401 PB.621.2 chr1 + 1764 15 full-splice_match POLR3C ENST00000334163.3 1851 15 67 20 no_subtype FALSE canonical NA NA 1617 None 4 2 0 FALSE 0 0 NA C coding 534 1602 95 1696 PB.153.1 chr1 + 1282 1 full-splice_match RP3-469D22.1 ENST00000419297.2 478 1 -9 -795 no_subtype FALSE canonical NA NA NA None 8 8 0 FALSE 0 0 NA A coding 159 477 10 486 PB.3075.1 chr4 - 2873 12 full-splice_match PRMT9 ENST00000322396.6 3528 12 52 603 no_subtype FALSE canonical NA NA 380 None 29 1 0 FALSE 0 0 NA A coding 845 2535 192 2726 PB.844.2 chr1 + 2967 7 novel_not_in_catalog MPZL1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1514 None 2 20 2 TRUE 0 0 NA C coding 209 627 910 1536 PB.844.3 chr1 + 3401 3 full-splice_match MPZL1 ENST00000392121.7 3421 3 19 1 no_subtype FALSE canonical NA NA 402 None 11 21 0 FALSE 0 0 NA C coding 119 357 145 501 PB.7655.1 chr14 - 1278 2 full-splice_match SPTSSA ENST00000298130.4 2777 2 113 1386 no_subtype FALSE canonical NA NA 148 None 16 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4752.1 chr7 + 4012 23 full-splice_match SLC4A2 ENST00000413384.6 4142 23 123 7 no_subtype FALSE canonical NA NA 3778 None 12 3 0 FALSE 0 0 NA C coding 1241 3723 134 3856 PB.10953.1 chrX + 1726 12 full-splice_match WAS ENST00000376701.4 1849 12 116 7 no_subtype FALSE canonical NA NA 1412 None 90 5 0 FALSE 0 0 NA C coding 465 1395 71 1465 PB.10953.2 chrX + 3131 10 novel_in_catalog WAS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2815 None 2 11 0 FALSE 0 0 NA C coding 264 792 2077 2868 PB.10953.3 chrX + 2921 11 novel_in_catalog WAS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2607 None 3 8 0 FALSE 0 0 NA C coding 196 588 2073 2660 PB.6698.1 chr11 + 2898 1 incomplete-splice_match ARHGEF12 ENST00000532993.5 8753 41 5843 13 no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11178.1 chrX - 1512 9 full-splice_match RBMX ENST00000320676.11 2012 9 0 500 no_subtype FALSE canonical NA NA 129 None 6 1 0 FALSE 0 0 NA A coding 391 1173 156 1328 PB.601.2 chr1 - 2193 4 full-splice_match CD58 ENST00000369487.3 892 4 50 -1351 no_subtype FALSE canonical NA NA 87 None 3 11 0 FALSE 0 0 NA A coding 240 720 18 737 PB.5262.2 chr9 - 4661 28 novel_not_in_catalog NOL6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 43 None 4 7 2 TRUE 0 0 NA A coding 1146 3438 62 3499 PB.6703.8 chr11 + 6471 49 novel_not_in_catalog SORL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 6282 None 12 1 1 TRUE 0 0 NA B coding 2097 6291 57 6347 PB.9835.1 chr19 + 2853 1 genic_intron novelGene_129 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6703.5 chr11 + 1585 10 novel_not_in_catalog SORL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1179 None 8 0 0 TRUE 0 0 NA B coding 368 1104 281 1384 PB.8458.5 chr16 - 2994 23 incomplete-splice_match MYH11 ENST00000300036.5 6029 41 162 2873 internal_fragment FALSE canonical NA NA 293 None 5 0 0 FALSE 0 0 NA C coding 937 2811 183 2993 PB.4554.1 chr7 - 2679 4 novel_in_catalog TSC22D4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 402 None 3 3 0 FALSE 0 0 NA C coding 382 1146 672 1817 PB.10977.1 chrX + 2506 2 genic GSPT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 284 None 2 11 0 FALSE 0 0 NA A coding 624 1872 214 2085 PB.6703.1 chr11 + 3470 14 novel_not_in_catalog SORL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1689 None 7 19 0 TRUE 0 0 NA B coding 610 1830 5 1834 PB.248.1 chr1 + 2739 1 antisense novelGene_SFPQ_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8458.2 chr16 + 1933 8 novel_in_catalog NDE1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 991 None 4 3 0 FALSE 0 0 NA B coding 335 1005 45 1049 PB.8458.3 chr16 + 1931 10 novel_not_in_catalog NDE1 novel NA NA NA NA no_subtype FALSE canonical NA NA 991 None 2 4 0 TRUE 0 0 NA B coding 335 1005 45 1049 PB.3812.6 chr6 + 5811 23 novel_in_catalog PRRC2A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5497 None 5 6 0 FALSE 0 0 NA C coding 1863 5589 47 5635 PB.3812.5 chr6 + 6056 26 incomplete-splice_match PRRC2A ENST00000376007.8 6861 31 793 12 internal_fragment FALSE canonical NA NA 5742 None 6 8 1 FALSE 0 0 NA C coding 1909 5727 154 5880 PB.3812.4 chr6 + 6584 31 novel_not_in_catalog PRRC2A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 6271 None 2 35 1 TRUE 0 0 NA C coding 1393 4179 208 4386 PB.3812.3 chr6 + 2596 12 novel_in_catalog PRRC2A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1522 None 2 7 0 FALSE 0 0 NA C coding 617 1851 233 2083 PB.3812.2 chr6 + 6846 31 full-splice_match PRRC2A ENST00000376007.8 6861 31 2 13 no_subtype FALSE canonical NA NA 6533 None 36 7 0 FALSE 0 0 NA C coding 2157 6471 201 6671 PB.3812.1 chr6 + 6612 31 novel_not_in_catalog PRRC2A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 6311 None 3 8 1 TRUE 0 0 NA C coding 2102 6306 144 6449 PB.2686.5 chr3 - 1594 3 novel_not_in_catalog RNF168 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 308 None 3 14 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.2686.4 chr3 - 1603 3 novel_not_in_catalog RNF168 novel NA NA NA NA no_subtype TRUE canonical NA NA 291 None 8 15 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.1749.1 chr2 + 3918 2 novel_not_in_catalog C2orf88 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 141 None 2 30 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.2686.1 chr3 - 1709 3 novel_not_in_catalog RNF168 novel NA NA NA NA no_subtype TRUE canonical NA NA 291 None 4 15 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.3025.1 chr4 - 5812 3 antisense novelGene_RP11-679C8.2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1048 None 2 37 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5774.1 chr10 - 3256 18 full-splice_match PARG ENST00000616448.1 3197 18 43 -102 no_subtype FALSE canonical NA NA 434 None 4 4 0 FALSE 0 0 NA A coding 976 2928 218 3145 PB.3704.1 chr5 + 2831 8 novel_not_in_catalog TRIM41 novel NA NA NA NA no_subtype FALSE canonical NA NA 2477 None 2 19 1 TRUE 0 0 NA B coding 625 1875 306 2180 PB.666.1 chr1 + 4302 22 novel_in_catalog SETDB1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3816 None 4 1 0 FALSE 0 0 NA B coding 1292 3876 56 3931 PB.5681.1 chr10 + 1308 13 full-splice_match CDC123 ENST00000281141.8 1542 13 225 9 no_subtype FALSE canonical NA NA 1039 None 24 3 0 FALSE 0 0 NA A coding 336 1008 56 1063 PB.3704.2 chr5 + 3187 7 novel_not_in_catalog TRIM41 novel NA NA NA NA no_subtype FALSE canonical NA NA 2833 None 3 15 1 TRUE 0 0 NA B coding 625 1875 304 2178 PB.10452.1 chr20 - 3177 12 full-splice_match BCAS1 ENST00000395961.7 3303 12 -45 171 no_subtype FALSE canonical NA NA 207 None 11 6 0 FALSE 0 0 NA A coding 584 1752 213 1964 PB.3971.1 chr6 - 3100 7 full-splice_match BMP5 ENST00000370830.3 3952 7 653 199 no_subtype FALSE canonical NA NA 536 None 3 10 0 FALSE 0 0 NA A coding 454 1362 47 1408 PB.3295.1 chr5 + 3463 13 full-splice_match NLN ENST00000380985.9 8661 13 52 5146 no_subtype FALSE canonical NA NA 2106 None 19 5 0 FALSE 0 0 NA A coding 704 2112 127 2238 PB.7062.8 chr12 + 3689 14 novel_not_in_catalog OS9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2920 None 2 10 1 TRUE 0 0 NA C coding 629 1887 13 1899 PB.3564.2 chr5 + 4129 23 novel_not_in_catalog FBXO38 novel NA NA NA NA no_subtype FALSE canonical NA NA 3538 None 3 3 0 TRUE 0 0 NA C coding 1188 3564 151 3714 PB.5865.1 chr10 - 2992 2 full-splice_match KCNMA1 ENST00000481070.1 896 2 -17 -2079 no_subtype FALSE canonical NA NA 542 None 5 17 0 FALSE 0 0 NA A coding 128 384 165 548 PB.642.2 chr1 + 4004 18 novel_not_in_catalog PDE4DIP novel NA NA NA NA no_subtype FALSE canonical NA NA 3499 None 15 3 0 TRUE 0 0 NA B coding 1116 3348 324 3671 PB.816.2 chr1 + 2727 7 novel_in_catalog UHMK1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1079 None 24 10 0 FALSE 0 0 NA C coding 355 1065 159 1223 PB.3096.1 chr4 + 3798 12 novel_in_catalog TRIM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2266 None 2 12 0 FALSE 0 0 NA C coding 744 2232 185 2416 PB.4319.1 chr7 + 5973 6 full-splice_match SP4 ENST00000222584.7 6126 6 71 82 no_subtype FALSE canonical NA NA 2254 None 9 17 0 FALSE 0 0 NA A coding 784 2352 148 2499 PB.816.7 chr1 + 2584 1 incomplete-splice_match UHMK1 ENST00000545294.5 8117 8 5508 26 no_subtype FALSE canonical NA NA NA None 21 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1354.1 chr2 - 1493 1 full-splice_match ATP1B3P1 ENST00000605365.1 821 1 -211 -461 no_subtype FALSE canonical NA NA NA None 13 5 0 FALSE 0 0 NA C coding 232 696 339 1034 PB.1354.2 chr2 - 1439 2 genic ATP1B3P1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 773 None 2 6 0 FALSE 0 0 NA C coding 163 489 338 826 PB.3564.4 chr5 + 3941 21 novel_in_catalog FBXO38 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3453 None 2 1 0 FALSE 0 0 NA C coding 1188 3564 66 3629 PB.3048.2 chr4 + 3195 1 genic_intron novelGene_1177 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4757.2 chr7 + 3195 16 novel_not_in_catalog NUB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1803 None 4 11 1 TRUE 0 0 NA B coding 615 1845 135 1979 PB.6708.10 chr11 - 1563 7 incomplete-splice_match HSPA8 ENST00000534624.5 2463 9 198 702 internal_fragment FALSE canonical NA NA 74 None 5 1 0 FALSE 0 0 NA C coding 494 1482 80 1561 PB.5561.8 chr9 + 1496 1 incomplete-splice_match PTPA ENST00000347048.8 1989 4 490 4 no_subtype FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4136.8 chr6 - 1874 1 novel_in_catalog VNN1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5561.6 chr9 + 1714 3 full-splice_match PTPA ENST00000414510.5 1153 3 92 -653 no_subtype FALSE canonical NA NA 160 None 5 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10324.1 chr20 - 5840 1 genic_intron novelGene_321 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA A coding 140 420 3323 3742 PB.5561.4 chr9 + 2603 11 novel_not_in_catalog PTPA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1046 None 2 7 2 TRUE 0 0 NA C coding 298 894 228 1121 PB.9500.1 chr18 + 1667 4 novel_not_in_catalog RNMT novel NA NA NA NA no_subtype FALSE canonical NA NA 285 None 2 11 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.5561.3 chr9 + 2594 10 novel_not_in_catalog PTPA novel NA NA NA NA no_subtype FALSE canonical NA NA 1037 None 3 5 0 TRUE 0 0 NA C coding 294 882 231 1112 PB.968.3 chr1 - 2788 16 novel_in_catalog KDM5B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 368 None 2 2 0 FALSE 0 0 NA C coding 776 2328 165 2492 PB.9500.2 chr18 + 6169 11 full-splice_match RNMT ENST00000589866.5 1879 11 189 -4479 no_subtype FALSE canonical NA NA 1564 None 12 36 0 FALSE 0 0 NA C coding 476 1428 172 1599 PB.2539.2 chr3 - 3157 2 antisense novelGene_MBNL1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 19 None 3 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8191.1 chr15 + 1525 2 novel_not_in_catalog SENP8 novel NA NA NA NA no_subtype FALSE canonical NA NA 152 None 2 3 0 FALSE 0 0 NA A coding 212 636 189 824 PB.2539.4 chr3 - 3163 2 antisense novelGene_MBNL1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 19 None 19 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1021.3 chr1 - 3695 2 novel_not_in_catalog C1orf132 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 789 None 3 12 0 TRUE 0 0 NA C coding 101 303 834 1136 PB.8176.1 chr15 - 3054 2 antisense novelGene_SMAD3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2269 None 2 19 1 FALSE 0 0 NA B coding 115 345 2292 2636 PB.7883.1 chr14 + 3877 7 novel_not_in_catalog OTUB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1107 None 4 16 1 TRUE 0 0 NA A coding 234 702 177 878 PB.408.2 chr1 + 2591 11 full-splice_match ATG4C ENST00000317868.8 2938 11 -19 366 no_subtype FALSE canonical NA NA 1435 None 3 8 0 FALSE 0 0 NA C coding 458 1374 227 1600 PB.408.3 chr1 + 2635 11 full-splice_match ATG4C ENST00000371120.7 2890 11 2 253 no_subtype FALSE canonical NA NA 1366 None 4 7 0 FALSE 0 0 NA C coding 458 1374 158 1531 PB.8245.1 chr15 - 1686 10 novel_not_in_catalog RASGRF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 2 3 0 FALSE 0 0 NA A coding 413 1239 333 1571 PB.3824.1 chr6 + 1908 1 full-splice_match HSPA1A ENST00000375651.6 2483 1 572 3 no_subtype FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA A coding 520 1560 85 1644 PB.3532.2 chr5 + 1844 12 full-splice_match TMCO6 ENST00000394671.7 1887 12 42 1 no_subtype FALSE canonical NA NA 1427 None 4 4 0 FALSE 0 0 NA C coding 493 1479 60 1538 PB.8730.2 chr16 - 3938 23 full-splice_match AP1G1 ENST00000299980.8 6969 23 142 2889 no_subtype FALSE canonical NA NA 297 None 46 7 0 FALSE 0 0 NA C coding 822 2466 301 2766 PB.3965.1 chr6 - 7016 12 novel_not_in_catalog TRAM2 novel NA NA NA NA no_subtype TRUE canonical NA NA 236 None 3 53 0 TRUE 0 0 NA A coding 370 1110 117 1226 PB.10464.1 chr20 + 3061 8 full-splice_match STX16 ENST00000371132.8 4552 8 -322 1813 no_subtype FALSE canonical NA NA 1534 None 2 11 0 FALSE 0 0 NA A coding 304 912 725 1636 PB.910.2 chr1 + 5780 22 full-splice_match SMG7 ENST00000347615.6 5788 22 7 1 no_subtype FALSE canonical NA NA 3412 None 10 14 1 FALSE 0 0 NA C coding 1137 3411 113 3523 PB.4542.1 chr7 + 2013 4 full-splice_match ZSCAN21 ENST00000292450.8 2005 4 -2 -6 no_subtype FALSE canonical NA NA 758 None 2 6 0 FALSE 0 0 NA A coding 466 1398 188 1585 PB.50.1 chr1 + 1943 8 novel_in_catalog UBE4B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1663 None 2 1 0 FALSE 0 0 NA A coding 355 1065 713 1777 PB.1809.1 chr2 + 1567 13 full-splice_match CYP20A1 ENST00000356079.8 1949 13 62 320 no_subtype FALSE canonical NA NA 1299 None 6 1 0 FALSE 0 0 NA A coding 462 1386 62 1447 PB.3656.1 chr5 - 1527 6 full-splice_match THOC3 ENST00000265097.8 1589 6 46 16 no_subtype FALSE canonical NA NA 312 None 8 6 0 FALSE 0 0 NA A coding 351 1053 46 1098 PB.3736.1 chr6 + 1586 2 full-splice_match SMIM13 ENST00000416247.3 4688 2 202 2900 no_subtype FALSE canonical NA NA 155 None 4 4 0 FALSE 0 0 NA A coding 198 594 865 1458 PB.6116.1 chr11 + 1186 8 full-splice_match TALDO1 ENST00000319006.7 1346 8 147 13 no_subtype FALSE canonical NA NA 987 None 55 0 0 FALSE 0 0 NA C coding 327 981 37 1017 PB.893.1 chr1 - 3936 4 novel_not_in_catalog TOR1AIP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 117 None 3 17 1 TRUE 0 0 NA B coding 131 393 931 1323 PB.6116.3 chr11 + 1099 7 novel_in_catalog TALDO1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 902 None 2 1 0 FALSE 0 0 NA C coding 283 849 84 932 PB.6116.2 chr11 + 1615 7 novel_in_catalog TALDO1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 893 None 2 3 0 FALSE 0 0 NA C coding 364 1092 89 1180 PB.5701.1 chr10 + 1466 1 genic_intron novelGene_171 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9127.7 chr17 - 2477 11 novel_in_catalog DHX58 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 85 None 2 2 0 FALSE 0 0 NA B coding 585 1755 87 1841 PB.5466.1 chr9 + 3573 9 full-splice_match C9orf91 ENST00000288502.8 2314 9 263 -1522 no_subtype FALSE canonical NA NA 1023 None 4 15 0 FALSE 0 0 NA A coding 342 1026 175 1200 PB.6603.6 chr11 - 1330 1 genic_intron novelGene_871 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6030.1 chr10 + 2635 14 full-splice_match TCF7L2 ENST00000627217.2 3680 14 -146 1191 no_subtype FALSE canonical NA NA 1887 None 2 11 0 FALSE 0 0 NA C coding 602 1806 497 2302 PB.6030.2 chr10 + 1423 10 incomplete-splice_match TCF7L2 ENST00000543371.5 4037 14 115 2499 3prime_fragment FALSE canonical NA NA 1408 None 2 8 1 FALSE 0 0 NA C coding 343 1029 393 1421 PB.5235.1 chr9 + 1508 1 genic_intron novelGene_179 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11118.1 chrX + 3974 11 full-splice_match IL13RA1 ENST00000371666.7 4036 11 52 10 no_subtype FALSE canonical NA NA 1206 None 66 12 0 FALSE 0 0 NA C coding 427 1281 16 1296 PB.919.1 chr1 - 2998 2 novel_not_in_catalog EDEM3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1627 None 4 25 1 TRUE 0 0 NA B coding 53 159 141 299 PB.3636.3 chr5 + 5902 52 novel_not_in_catalog DOCK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 5319 None 9 10 3 TRUE 0 0 NA B coding 1745 5235 145 5379 PB.919.2 chr1 - 1437 1 novel_in_catalog EDEM3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 9 8 0 FALSE 0 0 NA B coding 53 159 218 376 PB.11118.2 chrX + 2745 6 full-splice_match IL13RA1 ENST00000371642.1 1096 6 22 -1671 no_subtype FALSE canonical NA NA 691 None 3 12 0 FALSE 0 0 NA C coding 279 837 16 852 PB.5668.1 chr10 - 3280 14 full-splice_match ITIH5 ENST00000397146.6 6721 14 -19 3460 no_subtype FALSE canonical NA NA 188 None 15 6 0 FALSE 0 0 NA A coding 942 2826 99 2924 PB.6420.1 chr11 + 1849 8 full-splice_match SNX15 ENST00000377244.7 1939 8 86 4 no_subtype FALSE canonical NA NA 966 None 25 5 0 FALSE 0 0 NA A coding 342 1026 45 1070 PB.10087.2 chr19 - 2950 18 novel_not_in_catalog PLA2G4C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 239 None 5 15 3 TRUE 0 0 NA B coding 526 1578 275 1852 PB.10087.1 chr19 - 2462 19 novel_not_in_catalog PLA2G4C novel NA NA NA NA no_subtype TRUE non_canonical NA NA 315 None 2 8 3 TRUE 0 0 NA B coding 272 816 351 1166 PB.10196.1 chr19 - 3787 8 novel_not_in_catalog ZNF606 novel NA NA NA NA no_subtype FALSE canonical NA NA 437 None 2 24 1 TRUE 0 0 NA A coding 792 2376 480 2855 PB.8630.4 chr16 + 6153 2 full-splice_match CPNE2 ENST00000567011.1 901 2 -5055 -197 no_subtype FALSE canonical NA NA 5737 None 4 28 0 FALSE 0 0 NA A coding 176 528 5315 5842 PB.7859.1 chr14 - 3068 17 novel_not_in_catalog RPS6KA5 novel NA NA NA NA no_subtype TRUE canonical NA NA 296 None 2 5 0 TRUE 0 0 NA B coding 521 1563 934 2496 PB.7859.2 chr14 - 3120 18 novel_not_in_catalog RPS6KA5 novel NA NA NA NA no_subtype FALSE canonical NA NA 254 None 11 7 1 TRUE 0 0 NA B coding 802 2406 152 2557 PB.776.1 chr1 + 3143 5 full-splice_match SLAMF8 ENST00000289707.9 2996 5 98 -245 no_subtype FALSE canonical NA NA 832 None 2 9 0 FALSE 0 0 NA A coding 285 855 52 906 PB.10759.4 chr22 - 6144 12 full-splice_match DDX17 ENST00000216019.11 6441 12 267 30 no_subtype FALSE canonical NA NA 77 None 4 28 0 FALSE 0 0 NA C coding 407 1221 28 1248 PB.10759.6 chr22 - 5804 9 incomplete-splice_match DDX17 ENST00000216019.11 6441 12 595 42 5prime_fragment FALSE canonical NA NA 134 None 8 28 0 FALSE 0 0 NA C coding 304 912 9 920 PB.10759.7 chr22 - 2725 14 novel_in_catalog DDX17 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 367 None 5 8 2 FALSE 0 0 NA C coding 418 1254 318 1571 PB.10759.1 chr22 - 599 1 incomplete-splice_match DDX17 ENST00000431312.2 1853 2 1221 34 no_subtype FALSE canonical NA NA NA None 15 7 0 FALSE 0 0 NA C coding 37 111 262 372 PB.10759.2 chr22 - 2514 13 full-splice_match DDX17 ENST00000403230.1 2322 13 -25 -167 no_subtype FALSE canonical NA NA 387 None 48 10 0 FALSE 0 0 NA C coding 650 1950 338 2287 PB.8460.2 chr16 - 2258 5 full-splice_match FOPNL ENST00000255759.10 2275 5 7 10 no_subtype FALSE canonical NA NA 51 None 4 9 0 FALSE 0 0 NA A coding 174 522 24 545 PB.1158.8 chr1 - 2960 14 novel_not_in_catalog HNRNPU novel NA NA NA NA no_subtype FALSE non_canonical NA NA 860 None 2 3 1 FALSE 0 0 NA C coding 814 2442 203 2644 PB.1836.1 chr2 - 4456 12 novel_not_in_catalog LANCL1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 57 None 2 25 2 TRUE 0 0 NA C coding 399 1197 74 1270 PB.10759.8 chr22 - 2520 13 full-splice_match DDX17 ENST00000396821.7 4791 13 0 2271 no_subtype FALSE canonical NA NA 387 None 28 9 1 FALSE 0 0 NA C coding 652 1956 338 2293 PB.4177.2 chr6 + 2078 3 novel_not_in_catalog STX11 novel NA NA NA NA no_subtype FALSE canonical NA NA 323 None 2 5 0 FALSE 0 0 NA C coding 287 861 329 1189 PB.4339.4 chr7 - 1863 13 novel_not_in_catalog SKAP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 110 None 2 2 0 TRUE 0 0 NA B coding 187 561 320 880 PB.6783.4 chr12 + 1275 9 novel_not_in_catalog GAPDH novel NA NA NA NA no_subtype FALSE canonical NA NA 1008 None 223 2 1 FALSE 0 0 NA B coding 335 1005 71 1075 PB.905.4 chr1 + 1283 13 novel_not_in_catalog NPL novel NA NA NA NA no_subtype FALSE canonical NA NA 979 None 2 2 0 FALSE 0 0 NA B coding 320 960 202 1161 PB.6783.6 chr12 + 2908 8 novel_not_in_catalog GAPDH novel NA NA NA NA no_subtype FALSE canonical NA NA 2641 None 13 17 1 FALSE 0 0 NA B coding 334 1002 1707 2708 PB.6783.1 chr12 + 5415 39 novel_not_in_catalog NCAPD2 novel NA NA NA NA no_subtype TRUE canonical NA NA 5350 None 3 11 0 TRUE 0 0 NA C coding 1401 4203 810 5012 PB.4339.1 chr7 - 1663 1 incomplete-splice_match SKAP2 ENST00000345317.6 3998 13 2323 13 no_subtype FALSE canonical NA NA NA None 19 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.78.2 chr1 + 2916 6 novel_not_in_catalog SLC25A34 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2650 None 2 9 2 TRUE 0 0 NA B coding 259 777 188 964 PB.4339.3 chr7 - 2861 17 novel_not_in_catalog SKAP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 193 None 4 17 0 TRUE 0 0 NA B coding 359 1077 127 1203 PB.2545.1 chr3 - 2921 1 genic_intron novelGene_1259 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8146.3 chr15 - 2826 12 full-splice_match CSNK1G1 ENST00000303052.12 8179 12 86 5267 no_subtype FALSE canonical NA NA 186 None 3 6 0 FALSE 0 0 NA C coding 405 1215 462 1676 PB.6783.9 chr12 + 3420 2 antisense novelGene_CHD4_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 3207 None 2 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4339.9 chr7 - 2974 1 novel_in_catalog SKAP2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 22 0 FALSE 0 0 NA B coding 31 93 283 375 PB.6132.1 chr11 - 1752 5 full-splice_match H19 ENST00000414790.5 2361 5 591 18 no_subtype FALSE canonical NA NA 767 None 2 7 1 FALSE 0 0 NA A coding 256 768 68 835 PB.7377.1 chr12 + 2598 4 novel_in_catalog ZNF140 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 684 None 6 16 0 FALSE 0 0 NA B coding 457 1371 453 1823 PB.681.1 chr1 - 2855 6 antisense novelGene_SNX27_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2427 None 7 10 1 FALSE 0 0 NA B coding 114 342 1250 1591 PB.3442.3 chr5 + 3462 1 genic_intron novelGene_1074 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8053.2 chr15 - 1928 1 novel_in_catalog RP11-516C1.1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3784.1 chr6 - 4153 22 full-splice_match FAM65B ENST00000538035.5 5389 22 107 1129 no_subtype FALSE canonical NA NA 108 None 3 3 0 FALSE 0 0 NA C coding 1047 3141 48 3188 PB.4421.1 chr7 - 2012 17 novel_not_in_catalog DDC novel NA NA NA NA no_subtype TRUE canonical NA NA 125 None 2 7 1 TRUE 0 0 NA A coding 480 1440 154 1593 PB.9461.1 chr18 - 2076 21 full-splice_match THOC1 ENST00000261600.10 2087 21 4 7 no_subtype FALSE canonical NA NA 58 None 5 2 0 FALSE 0 0 NA A coding 657 1971 5 1975 PB.8197.1 chr15 + 2945 1 antisense novelGene_NPTN-IT1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 15 20 0 FALSE 0 0 NA A coding 146 438 1667 2104 PB.3784.4 chr6 - 2728 14 novel_in_catalog FAM65B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 126 None 21 4 0 FALSE 0 0 NA C coding 642 1926 66 1991 PB.5480.2 chr9 + 2593 18 novel_not_in_catalog GSN novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2186 None 3 5 1 TRUE 0 0 NA C coding 731 2193 161 2353 PB.5480.3 chr9 + 2536 18 novel_not_in_catalog GSN novel NA NA NA NA no_subtype FALSE canonical NA NA 2129 None 2 8 0 TRUE 0 0 NA C coding 731 2193 104 2296 PB.4190.1 chr6 - 2074 13 full-splice_match PPIL4 ENST00000253329.2 2232 13 -34 192 no_subtype FALSE canonical NA NA 137 None 3 7 0 FALSE 0 0 NA A coding 492 1476 68 1543 PB.4866.1 chr8 - 1609 6 full-splice_match SARAF ENST00000256255.10 2154 6 133 412 no_subtype FALSE canonical NA NA 228 None 132 2 0 FALSE 0 0 NA A coding 339 1017 126 1142 PB.4150.6 chr6 - 5708 4 antisense novelGene_RNA5SP219_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4242 None 2 34 2 FALSE 0 0 NA A coding 121 363 124 486 PB.6884.1 chr12 + 2741 3 full-splice_match KLHL42 ENST00000381271.6 6703 3 271 3691 no_subtype FALSE canonical NA NA 1106 None 15 13 0 FALSE 0 0 NA C coding 505 1515 41 1555 PB.6884.2 chr12 + 2558 2 full-splice_match KLHL42 ENST00000543254.1 772 2 -557 -1229 no_subtype FALSE canonical NA NA 893 None 6 8 0 FALSE 0 0 NA C coding 357 1071 22 1092 PB.1192.1 chr2 - 3217 7 full-splice_match E2F6 ENST00000381525.7 3218 7 -3 4 no_subtype FALSE canonical NA NA 381 None 2 13 0 FALSE 0 0 NA A coding 281 843 274 1116 PB.5179.1 chr8 + 2934 11 novel_in_catalog PPP1R16A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2338 None 6 12 0 FALSE 0 0 NA B coding 240 720 1041 1760 PB.10751.1 chr22 + 1457 9 full-splice_match GCAT ENST00000248924.10 1497 9 35 5 no_subtype TRUE canonical NA NA 1129 None 2 1 0 FALSE 0 0 NA A coding 419 1257 22 1278 PB.5179.3 chr8 + 2992 10 novel_in_catalog PPP1R16A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2392 None 2 8 0 FALSE 0 0 NA B coding 240 720 1015 1734 PB.5179.2 chr8 + 2768 12 novel_in_catalog PPP1R16A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2169 None 25 13 0 FALSE 0 0 NA B coding 528 1584 967 2550 PB.6219.1 chr11 + 5808 15 novel_not_in_catalog PDE3B novel NA NA NA NA no_subtype FALSE canonical NA NA 1936 None 2 31 1 TRUE 0 0 NA A coding 530 1590 544 2133 PB.7782.3 chr14 - 2839 9 novel_not_in_catalog DCAF5 novel NA NA NA NA no_subtype FALSE canonical NA NA 180 None 8 3 1 FALSE 0 0 NA B coding 616 1848 949 2796 PB.4441.1 chr7 - 1632 6 novel_not_in_catalog SBDS novel NA NA NA NA no_subtype FALSE canonical NA NA 358 None 57 6 0 TRUE 0 0 NA A coding 250 750 231 980 PB.4170.1 chr6 + 1575 8 incomplete-splice_match PHACTR2 ENST00000367582.7 4367 12 4 2788 3prime_fragment FALSE canonical NA NA 1526 None 2 2 0 FALSE 0 0 NA B coding 466 1398 178 1575 PB.9636.1 chr19 + 6807 48 novel_not_in_catalog ABCA7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 6508 None 4 9 2 FALSE 0 0 NA B coding 2146 6438 224 6661 PB.7000.2 chr12 + 1450 9 full-splice_match TARBP2 ENST00000394357.6 1402 9 -33 -15 no_subtype FALSE canonical NA NA 1013 None 4 2 0 FALSE 0 0 NA C coding 345 1035 134 1168 PB.9852.1 chr19 - 4066 7 novel_not_in_catalog SLC35E1 novel NA NA NA NA no_subtype FALSE canonical NA NA 449 None 2 37 2 TRUE 0 0 NA C coding 410 1230 29 1258 PB.7622.1 chr14 + 1508 3 novel_in_catalog THTPA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 625 None 21 8 0 FALSE 0 0 NA A coding 230 690 79 768 PB.9852.3 chr19 - 2559 6 full-splice_match SLC35E1 ENST00000595753.5 5099 6 11 2529 no_subtype FALSE canonical NA NA 428 None 25 7 0 FALSE 0 0 NA C coding 410 1230 8 1237 PB.10656.2 chr22 + 3468 24 novel_not_in_catalog PPIL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2902 None 10 25 2 TRUE 0 0 NA B coding 520 1560 67 1626 PB.10304.1 chr20 - 1549 9 full-splice_match APMAP ENST00000217456.2 2430 9 257 624 no_subtype FALSE canonical NA NA 129 None 36 3 0 FALSE 0 0 NA A coding 416 1248 35 1282 PB.2202.4 chr3 - 3885 22 novel_in_catalog UBA7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 215 None 2 5 0 FALSE 0 0 NA C coding 632 1896 1895 3790 PB.4462.1 chr7 + 1345 11 full-splice_match NCF1 ENST00000289473.8 1396 11 50 1 no_subtype FALSE canonical NA NA 1071 None 46 0 0 FALSE 0 0 NA C coding 390 1170 21 1190 PB.8628.8 chr16 + 6802 50 novel_not_in_catalog NLRC5 novel NA NA NA NA no_subtype FALSE canonical NA NA 5712 None 3 7 0 TRUE 0 0 NA B coding 1064 3192 2630 5821 PB.2202.1 chr3 - 3290 24 full-splice_match UBA7 ENST00000333486.3 3299 24 0 9 no_subtype FALSE canonical NA NA 215 None 33 1 0 FALSE 0 0 NA C coding 1012 3036 160 3195 PB.2202.3 chr3 - 3704 23 novel_in_catalog UBA7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 215 None 2 3 0 FALSE 0 0 NA C coding 707 2121 1489 3609 PB.2202.2 chr3 - 3406 25 novel_not_in_catalog UBA7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 215 None 5 14 2 TRUE 0 0 NA C coding 653 1959 1353 3311 PB.8628.3 chr16 + 6859 51 novel_not_in_catalog NLRC5 novel NA NA NA NA no_subtype FALSE canonical NA NA 5769 None 3 9 0 TRUE 0 0 NA B coding 1832 5496 191 5686 PB.8628.2 chr16 + 6904 50 novel_not_in_catalog NLRC5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5816 None 2 17 3 FALSE 0 0 NA B coding 843 2529 200 2728 PB.8829.2 chr17 - 3383 12 novel_not_in_catalog PITPNA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 38 None 4 17 3 TRUE 0 0 NA A coding 264 792 19 810 PB.10866.1 chrX + 2649 1 genic TLR8 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 6 0 FALSE 0 0 NA A coding 367 1101 478 1578 PB.8628.6 chr16 + 6794 50 novel_not_in_catalog NLRC5 novel NA NA NA NA no_subtype FALSE canonical NA NA 5704 None 4 3 0 TRUE 0 0 NA B coding 1875 5625 189 5813 PB.8628.4 chr16 + 2976 5 novel_not_in_catalog NLRC5 novel NA NA NA NA no_subtype FALSE canonical NA NA 1749 None 4 17 0 TRUE 0 0 NA B coding 150 450 147 596 PB.8043.1 chr15 + 1582 10 novel_not_in_catalog CKMT1A novel NA NA NA NA no_subtype FALSE canonical NA NA 1335 None 38 4 0 FALSE 0 0 NA C coding 417 1251 199 1449 PB.8043.2 chr15 + 1579 10 novel_not_in_catalog CKMT1A novel NA NA NA NA no_subtype FALSE canonical NA NA 1332 None 27 2 0 FALSE 0 0 NA C coding 417 1251 196 1446 PB.8043.3 chr15 + 1488 10 novel_not_in_catalog CKMT1A novel NA NA NA NA no_subtype FALSE canonical NA NA 1246 None 15 3 0 TRUE 0 0 NA C coding 417 1251 110 1360 PB.8043.5 chr15 + 1523 10 novel_not_in_catalog CKMT1A novel NA NA NA NA no_subtype FALSE canonical NA NA 1276 None 7 2 0 TRUE 0 0 NA C coding 417 1251 140 1390 PB.8043.6 chr15 + 1574 10 novel_not_in_catalog CKMT1A novel NA NA NA NA no_subtype FALSE canonical NA NA 1327 None 9 3 0 FALSE 0 0 NA C coding 417 1251 191 1441 PB.8043.7 chr15 + 1630 10 full-splice_match CKMT1A ENST00000434505.5 1779 10 144 5 no_subtype FALSE canonical NA NA 1385 None 11 4 1 FALSE 0 0 NA C coding 417 1251 249 1499 PB.8043.8 chr15 + 1590 9 full-splice_match CKMT1A ENST00000413453.6 1911 9 319 2 no_subtype FALSE canonical NA NA 1342 None 6 1 0 FALSE 0 0 NA C coding 417 1251 206 1456 PB.4449.1 chr7 - 1572 6 full-splice_match BCL7B ENST00000223368.6 1975 6 402 1 no_subtype FALSE canonical NA NA 114 None 2 7 0 FALSE 0 0 NA C coding 202 606 23 628 PB.9550.2 chr18 + 3593 1 genic_intron novelGene_444 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A coding 104 312 2789 3100 PB.5030.1 chr8 + 2155 6 novel_not_in_catalog SDC2 novel NA NA NA NA no_subtype TRUE canonical NA NA 901 None 12 6 0 TRUE 0 0 NA C coding 172 516 547 1062 PB.5030.3 chr8 + 2918 5 novel_not_in_catalog SDC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 541 None 2 13 0 FALSE 0 0 NA C coding 172 516 187 702 PB.5030.2 chr8 + 3273 7 novel_not_in_catalog SDC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2308 None 14 11 0 TRUE 0 0 NA C coding 172 516 547 1062 PB.5030.4 chr8 + 2928 5 full-splice_match SDC2 ENST00000302190.8 3759 5 814 17 no_subtype FALSE canonical NA NA 549 None 4 9 0 FALSE 0 0 NA C coding 201 603 108 710 PB.678.8 chr1 - 3586 11 novel_in_catalog RFX5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 60 None 3 16 0 FALSE 0 0 NA C coding 616 1848 192 2039 PB.5717.9 chr10 - 3096 1 genic_intron novelGene_263 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4850.1 chr8 + 4490 14 full-splice_match DPYSL2 ENST00000311151.9 4603 14 105 8 no_subtype TRUE canonical NA NA 1934 None 2 19 0 FALSE 0 0 NA A coding 572 1716 308 2023 PB.703.1 chr1 + 1065 7 full-splice_match HAX1 ENST00000328703.11 1227 7 158 4 no_subtype FALSE canonical NA NA 809 None 4 2 0 FALSE 0 0 NA A coding 279 837 56 892 PB.5697.6 chr10 + 2611 7 novel_in_catalog VIM novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2256 None 6 7 0 FALSE 0 0 NA C coding 347 1041 144 1184 PB.7565.1 chr13 - 3259 6 full-splice_match SLC10A2 ENST00000245312.4 3779 6 516 4 no_subtype FALSE canonical NA NA 458 None 6 8 0 FALSE 0 0 NA A coding 348 1044 82 1125 PB.5697.4 chr10 + 1733 11 novel_not_in_catalog VIM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1383 None 2 13 2 TRUE 0 0 NA C coding 313 939 484 1422 PB.5697.5 chr10 + 2728 7 novel_in_catalog VIM novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2364 None 3 9 0 FALSE 0 0 NA C coding 410 1230 146 1375 PB.2787.1 chr4 + 1935 3 full-splice_match C4orf19 ENST00000284437.6 1949 3 0 14 no_subtype FALSE canonical NA NA 210 None 2 5 0 FALSE 0 0 NA A coding 314 942 179 1120 PB.5697.3 chr10 + 3070 6 novel_in_catalog VIM novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2714 None 7 11 0 FALSE 0 0 NA C coding 347 1041 146 1186 PB.5697.1 chr10 + 1450 9 full-splice_match VIM ENST00000224237.9 1868 9 416 2 no_subtype FALSE canonical NA NA 1088 None 593 2 0 FALSE 0 0 NA C coding 313 939 189 1127 PB.3605.1 chr5 - 1041 1 antisense novelGene_LARP1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2245.1 chr3 + 808 4 full-splice_match SPCS1 ENST00000602728.1 832 4 23 1 no_subtype FALSE canonical NA NA 329 None 3 2 0 FALSE 0 0 NA A coding 102 306 147 452 PB.5578.3 chr9 - 2550 1 incomplete-splice_match FAM78A ENST00000372269.7 3659 4 1102 8 no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA C coding 99 297 1867 2163 PB.349.1 chr1 - 2725 4 full-splice_match MOB3C ENST00000319928.7 2822 4 81 16 no_subtype FALSE canonical NA NA 100 None 17 12 0 FALSE 0 0 NA A coding 216 648 151 798 PB.7959.99 chr14 - 1504 10 fusion IGHA1,IGHV3-11 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 124 None 2 26 6 TRUE 0 0 NA A coding 229 687 238 924 PB.7959.98 chr14 - 1546 7 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 3 9 2 TRUE 0 0 NA B coding 254 762 740 1501 PB.11212.2 chrX - 1699 10 full-splice_match FAM3A ENST00000359889.9 1712 10 -6 19 no_subtype TRUE canonical NA NA 333 None 3 7 0 FALSE 0 0 NA C coding 230 690 374 1063 PB.1801.2 chr2 + 2062 13 novel_not_in_catalog STRADB novel NA NA NA NA no_subtype FALSE canonical NA NA 1378 None 11 3 0 TRUE 0 0 NA C coding 418 1254 266 1519 PB.7747.2 chr14 + 2943 14 full-splice_match PRKCH ENST00000555082.5 2932 14 -18 7 no_subtype FALSE canonical NA NA 1658 None 3 1 1 FALSE 0 0 NA C coding 522 1566 237 1802 PB.740.1 chr1 - 2808 1 incomplete-splice_match MEX3A ENST00000532414.2 6124 2 890 2427 no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A coding 51 153 519 671 PB.7747.1 chr14 + 2930 14 full-splice_match PRKCH ENST00000332981.9 3582 14 626 26 no_subtype FALSE canonical NA NA 1664 None 4 0 0 FALSE 0 0 NA C coding 522 1566 243 1808 PB.2914.22 chr4 - 5515 19 novel_not_in_catalog SEC31A novel NA NA NA NA no_subtype FALSE canonical NA NA 106 None 2 29 3 TRUE 0 0 NA C coding 509 1527 111 1637 PB.7959.90 chr14 - 1462 8 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 8 4 TRUE 0 0 NA B coding 254 762 656 1417 PB.2914.20 chr4 - 4351 25 novel_not_in_catalog SEC31A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 392 None 3 13 0 FALSE 0 0 NA C coding 1181 3543 397 3939 PB.7959.92 chr14 - 1499 7 fusion IGHV3-62,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 125 None 2 5 2 TRUE 0 0 NA B coding 254 762 693 1454 PB.7959.95 chr14 - 1482 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 17 2 TRUE 0 0 NA B coding 261 783 11 793 PB.8537.1 chr16 - 2591 2 full-splice_match C16orf54 ENST00000329410.3 2585 2 -16 10 no_subtype FALSE canonical NA NA 112 None 55 17 0 FALSE 0 0 NA A coding 224 672 113 784 PB.7959.97 chr14 - 1505 9 fusion IGHV6-1,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 99 None 2 6 5 TRUE 0 0 NA B coding 470 1410 51 1460 PB.2914.25 chr4 - 1482 11 incomplete-splice_match SEC31A ENST00000436790.6 1717 12 -10 245 internal_fragment FALSE canonical NA NA 107 None 4 0 0 FALSE 0 0 NA C coding 457 1371 112 1482 PB.10773.4 chr22 + 3552 7 novel_not_in_catalog MIEF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 918 None 2 11 2 TRUE 0 0 NA C coding 239 717 1006 1722 PB.10773.5 chr22 + 2972 1 incomplete-splice_match MIEF1 ENST00000325301.6 5625 6 2649 5 no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA C coding 158 474 2370 2843 PB.4399.1 chr7 - 3823 8 novel_not_in_catalog RASA4CP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 172 None 7 24 1 TRUE 0 0 NA A coding 219 657 95 751 PB.10773.1 chr22 + 5611 6 full-splice_match MIEF1 ENST00000325301.6 5625 6 11 3 no_subtype FALSE canonical NA NA 998 None 22 22 0 FALSE 0 0 NA C coding 463 1389 414 1802 PB.10773.2 chr22 + 5542 6 full-splice_match MIEF1 ENST00000433117.6 3838 6 53 -1757 no_subtype FALSE canonical NA NA 921 None 4 22 0 FALSE 0 0 NA C coding 285 855 871 1725 PB.10773.3 chr22 + 3590 6 novel_not_in_catalog MIEF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 945 None 2 10 1 FALSE 0 0 NA C coding 331 993 757 1749 PB.1935.1 chr2 - 1483 2 genic_intron novelGene_1418 novel NA NA NA NA no_subtype FALSE canonical NA NA 89 None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8936.2 chr17 + 3976 3 genic_intron novelGene_112 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1805 None 3 18 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.10624.12 chr22 - 2923 9 novel_in_catalog DGCR2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 288 None 10 13 1 FALSE 0 0 NA C coding 243 729 877 1605 PB.11041.2 chrX + 1592 5 novel_in_catalog PBDC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1006 None 2 5 0 FALSE 0 0 NA B coding 122 366 75 440 PB.11041.1 chrX + 2848 4 novel_in_catalog PBDC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2261 None 4 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8961.1 chr17 - 3777 21 novel_not_in_catalog TOP3A novel NA NA NA NA no_subtype FALSE canonical NA NA 377 None 21 3 0 TRUE 0 0 NA A coding 976 2928 273 3200 PB.477.1 chr1 + 3204 2 novel_not_in_catalog ZNF326 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1018 None 6 25 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.1704.2 chr2 + 2749 10 full-splice_match CDCA7 ENST00000306721.7 2789 10 32 8 no_subtype FALSE canonical NA NA 1393 None 11 6 0 FALSE 0 0 NA C coding 450 1350 72 1421 PB.9595.1 chr18 - 2918 1 genic_intron novelGene_604 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 12 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4140.3 chr6 - 2788 11 novel_in_catalog SGK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 125 None 2 15 0 FALSE 0 0 NA C coding 288 864 917 1780 PB.8527.2 chr16 + 2927 21 novel_not_in_catalog EIF3C novel NA NA NA NA no_subtype FALSE canonical NA NA 2763 None 102 2 0 FALSE 0 0 NA C coding 913 2739 105 2843 PB.8527.1 chr16 + 2900 21 full-splice_match EIF3C ENST00000331666.10 3145 21 110 135 no_subtype TRUE canonical NA NA 2735 None 395 0 0 FALSE 0 0 NA C coding 913 2739 77 2815 PB.8527.4 chr16 + 2755 20 full-splice_match EIF3C ENST00000566866.5 2986 20 228 3 no_subtype FALSE canonical NA NA 2591 None 6 0 0 FALSE 0 0 NA C coding 843 2529 143 2671 PB.9550.1 chr18 + 3637 3 incomplete-splice_match SETBP1 ENST00000282030.5 9899 6 2558 3704 internal_fragment FALSE canonical NA NA 1909 None 2 10 0 FALSE 0 0 NA B coding 821 2463 64 2526 PB.3552.2 chr5 + 3053 9 novel_not_in_catalog RNF14 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1604 None 30 9 1 TRUE 0 0 NA B coding 474 1422 238 1659 PB.4140.1 chr6 - 2359 12 full-splice_match SGK1 ENST00000237305.11 2401 12 40 2 no_subtype FALSE canonical NA NA 125 None 7 7 0 FALSE 0 0 NA C coding 431 1293 50 1342 PB.8252.1 chr15 + 1383 1 full-splice_match MESDC1 ENST00000267984.3 4845 1 1675 1787 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A coding 188 564 176 739 PB.3230.5 chr5 - 1247 1 incomplete-splice_match SEPP1 ENST00000514985.5 2243 5 984 13 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3230.4 chr5 - 2051 5 full-splice_match SEPP1 ENST00000514985.5 2243 5 189 3 no_subtype FALSE canonical NA NA 55 None 2 9 1 FALSE 0 0 NA C coding 100 300 613 912 PB.7101.1 chr12 + 2943 3 novel_not_in_catalog IFNG-AS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 215 None 2 10 0 FALSE 0 0 NA A coding 315 945 1427 2371 PB.3230.1 chr5 - 1809 6 novel_not_in_catalog SEPP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 52 None 115 4 0 TRUE 0 0 NA C coding 100 300 615 914 PB.4099.1 chr6 + 1087 2 novel_in_catalog FAM26F novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 595 None 3 0 0 FALSE 0 0 NA A coding 315 945 71 1015 PB.3552.1 chr5 + 3352 10 novel_not_in_catalog RNF14 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3302 None 3 10 1 TRUE 0 0 NA B coding 474 1422 258 1679 PB.9447.1 chr17 + 2779 17 novel_not_in_catalog LRRC45 novel NA NA NA NA no_subtype FALSE canonical NA NA 2239 None 4 7 1 TRUE 0 0 NA C coding 363 1089 347 1435 PB.6279.2 chr11 - 3415 5 novel_not_in_catalog COMMD9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 70 None 4 27 1 TRUE 0 0 NA C coding 106 318 20 337 PB.6279.1 chr11 - 1276 6 full-splice_match COMMD9 ENST00000263401.9 2954 6 5 1673 no_subtype FALSE canonical NA NA 63 None 8 2 0 FALSE 0 0 NA C coding 198 594 13 606 PB.7686.2 chr14 + 1643 1 incomplete-splice_match ARF6 ENST00000298316.6 3865 2 2218 5 no_subtype FALSE canonical NA NA NA None 115 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8329.3 chr15 + 6173 26 incomplete-splice_match LRRK1 ENST00000388948.7 7671 34 1492 6 internal_fragment FALSE canonical NA NA 4737 None 2 17 1 FALSE 0 0 NA B coding 1572 4716 197 4912 PB.7686.1 chr14 + 1550 2 full-splice_match ARF6 ENST00000298316.6 3865 2 26 2289 no_subtype FALSE canonical NA NA 40 None 29 4 0 FALSE 0 0 NA C coding 175 525 522 1046 PB.7463.1 chr13 + 1554 1 full-splice_match GPALPP1 ENST00000611650.1 899 1 -2 -653 no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A coding 100 300 129 428 PB.9014.1 chr17 - 3187 2 novel_in_catalog MYO18A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 78 None 7 11 0 FALSE 0 0 NA B coding 353 1059 160 1218 PB.1076.6 chr1 - 1649 1 incomplete-splice_match LBR ENST00000272163.8 3745 14 2091 6 no_subtype FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6541.3 chr11 - 3554 1 novel_in_catalog THAP12 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 29 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6541.2 chr11 - 3099 4 novel_in_catalog THAP12 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 123 None 3 5 0 FALSE 0 0 NA B coding 696 2088 109 2196 PB.8854.1 chr17 + 1285 1 antisense novelGene_UBE2G1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11049.1 chrX - 2677 3 genic_intron novelGene_731 novel NA NA NA NA no_subtype FALSE canonical NA NA 177 None 2 19 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.3138.1 chr4 + 2598 3 novel_not_in_catalog CDKN2AIP novel NA NA NA NA no_subtype FALSE canonical NA NA 498 None 7 17 1 FALSE 0 0 NA C coding 579 1737 96 1832 PB.10091.1 chr19 - 1485 5 full-splice_match KDELR1 ENST00000330720.6 1557 5 53 19 no_subtype TRUE canonical NA NA 233 None 115 1 0 FALSE 0 0 NA A coding 212 636 143 778 PB.2426.1 chr3 + 3745 9 novel_not_in_catalog PARP15 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3534 None 2 18 1 TRUE 0 0 NA A coding 380 1140 732 1871 PB.6440.1 chr11 - 2551 11 full-splice_match RELA ENST00000406246.7 2700 11 141 8 no_subtype TRUE canonical NA NA 128 None 36 10 0 FALSE 0 0 NA A coding 551 1653 122 1774 PB.8679.1 chr16 - 2005 3 full-splice_match GFOD2 ENST00000268797.11 2126 3 105 16 no_subtype FALSE canonical NA NA 154 None 4 5 0 FALSE 0 0 NA A coding 385 1155 242 1396 PB.1012.11 chr1 - 3026 12 novel_not_in_catalog PIGR novel NA NA NA NA no_subtype FALSE non_canonical NA NA 130 None 2 4 1 TRUE 0 0 NA C coding 764 2292 184 2475 PB.1012.10 chr1 - 3113 12 novel_not_in_catalog PIGR novel NA NA NA NA no_subtype FALSE canonical NA NA 131 None 4 3 1 TRUE 0 0 NA C coding 764 2292 185 2476 PB.1012.15 chr1 - 3118 11 full-splice_match PIGR ENST00000356495.4 4279 11 1 1160 no_subtype FALSE canonical NA NA 130 None 121 1 0 FALSE 0 0 NA C coding 764 2292 184 2475 PB.1012.14 chr1 - 3038 11 novel_not_in_catalog PIGR novel NA NA NA NA no_subtype FALSE canonical NA NA 130 None 2 13 2 TRUE 0 0 NA C coding 361 1083 184 1266 PB.8874.1 chr17 + 3200 1 incomplete-splice_match ZFP3 ENST00000318833.3 5206 2 2005 2 no_subtype FALSE canonical NA NA NA None 7 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6506.1 chr11 - 8702 27 novel_not_in_catalog NUMA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 133 None 2 34 1 TRUE 0 0 NA B coding 1564 4692 171 4862 PB.9828.2 chr19 - 1761 10 novel_not_in_catalog GIPC1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 19 None 2 12 1 TRUE 0 0 NA B coding 289 867 244 1110 PB.9828.3 chr19 - 1689 9 novel_not_in_catalog GIPC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 84 None 3 4 0 FALSE 0 0 NA B coding 236 708 331 1038 PB.10117.2 chr19 - 1727 17 full-splice_match PNKP ENST00000322344.7 2041 17 310 4 no_subtype FALSE canonical NA NA 108 None 18 0 0 FALSE 0 0 NA C coding 521 1563 122 1684 PB.9828.1 chr19 - 1868 9 novel_not_in_catalog GIPC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 8 4 0 FALSE 0 0 NA B coding 333 999 225 1223 PB.4792.1 chr8 + 5587 2 genic_intron novelGene_71 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 866 None 2 30 1 FALSE 0 0 NA A coding 211 633 1368 2000 PB.7296.5 chr12 - 1342 12 novel_not_in_catalog TAOK3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 269 None 2 4 1 TRUE 0 0 NA B coding 304 912 430 1341 PB.5120.1 chr8 + 2360 3 full-splice_match MYC ENST00000613283.1 2364 3 1 3 no_subtype FALSE canonical NA NA 1326 None 2 6 0 FALSE 0 0 NA A coding 439 1317 570 1886 PB.8555.1 chr16 - 1321 7 full-splice_match CD2BP2 ENST00000305596.7 3421 7 82 2018 no_subtype FALSE canonical NA NA 68 None 39 2 0 FALSE 0 0 NA A coding 341 1023 95 1117 PB.2998.1 chr4 + 1938 1 genic_intron novelGene_968 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4830.1 chr8 - 1528 9 full-splice_match BIN3 ENST00000276416.10 1835 9 -1 308 no_subtype FALSE canonical NA NA 78 None 39 2 0 FALSE 0 0 NA A coding 253 759 71 829 PB.9254.1 chr17 - 3207 11 full-splice_match CUEDC1 ENST00000577830.5 3621 11 51 363 no_subtype FALSE canonical NA NA 48 None 2 17 0 FALSE 0 0 NA A coding 386 1158 364 1521 PB.2278.1 chr3 - 1335 8 full-splice_match PSMD6 ENST00000295901.8 1430 8 90 5 no_subtype FALSE canonical NA NA 196 None 13 3 0 FALSE 0 0 NA A coding 389 1167 52 1218 PB.1425.2 chr2 - 1309 6 full-splice_match MOB1A ENST00000396049.4 4885 6 16 3560 no_subtype FALSE canonical NA NA 192 None 122 1 0 FALSE 0 0 NA C coding 216 648 179 826 PB.474.2 chr1 + 3661 2 novel_in_catalog LRRC8C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 191 None 2 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.266.94 chr1 - 1933 6 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 95 None 2 12 3 TRUE 0 0 NA C coding 118 354 546 899 PB.7394.1 chr13 - 3899 1 genic_intron novelGene_231 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4868.1 chr8 - 1315 8 full-splice_match GTF2E2 ENST00000355904.8 1762 8 203 244 no_subtype FALSE canonical NA NA 76 None 33 3 0 FALSE 0 0 NA A coding 291 873 81 953 PB.6456.1 chr11 - 5820 3 genic RP11-755F10.1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4667 None 2 44 0 TRUE 0 0 NA A coding 196 588 3080 3667 PB.9034.1 chr17 + 1471 11 novel_not_in_catalog ADAP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1091 None 2 3 0 TRUE 0 0 NA A coding 259 777 347 1123 PB.2218.1 chr3 + 3859 6 novel_not_in_catalog HEMK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2930 None 20 14 0 TRUE 0 0 NA C coding 178 534 256 789 PB.2218.2 chr3 + 3816 6 novel_not_in_catalog HEMK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2887 None 5 18 2 TRUE 0 0 NA C coding 24 72 334 405 PB.2218.3 chr3 + 1494 11 full-splice_match HEMK1 ENST00000232854.8 6087 11 325 4268 no_subtype FALSE canonical NA NA 1207 None 3 4 0 FALSE 0 0 NA C coding 338 1014 228 1241 PB.6667.2 chr11 + 2478 8 novel_not_in_catalog CD3G novel NA NA NA NA no_subtype FALSE canonical NA NA 1968 None 2 18 0 TRUE 0 0 NA B coding 182 546 35 580 PB.9136.20 chr17 - 2696 25 novel_not_in_catalog STAT3 novel NA NA NA NA no_subtype FALSE canonical NA NA 153 None 2 2 0 TRUE 0 0 NA B coding 779 2337 177 2513 PB.6667.1 chr11 + 2609 8 novel_not_in_catalog CD3G novel NA NA NA NA no_subtype FALSE canonical NA NA 1944 None 4 18 1 TRUE 0 0 NA B coding 182 546 26 571 PB.4852.11 chr8 + 3937 31 novel_not_in_catalog PTK2B novel NA NA NA NA no_subtype FALSE canonical NA NA 2847 None 5 5 0 TRUE 0 0 NA B coding 967 2901 160 3060 PB.8880.1 chr17 - 5538 17 novel_not_in_catalog NLRP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 217 None 4 35 4 TRUE 0 0 NA B coding 1117 3351 364 3714 PB.3135.2 chr4 + 4436 6 novel_not_in_catalog SPCS3 novel NA NA NA NA no_subtype FALSE canonical NA NA 3386 None 2 36 1 TRUE 0 0 NA C coding 162 486 156 641 PB.8880.5 chr17 - 3026 5 novel_not_in_catalog NLRP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 825 None 2 5 0 FALSE 0 0 NA B coding 789 2367 555 2921 PB.8880.4 chr17 - 2933 5 novel_not_in_catalog NLRP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 809 None 3 5 0 FALSE 0 0 NA B coding 795 2385 539 2923 PB.9197.1 chr17 - 3659 23 full-splice_match OSBPL7 ENST00000007414.7 3640 23 -20 1 no_subtype FALSE canonical NA NA 125 None 2 4 0 FALSE 0 0 NA C coding 842 2526 213 2738 PB.4977.1 chr8 - 2825 1 novel_in_catalog TCEB1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 8 36 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9197.2 chr17 - 2953 23 novel_not_in_catalog OSBPL7 novel NA NA NA NA no_subtype FALSE canonical NA NA 114 None 4 1 0 FALSE 0 0 NA C coding 813 2439 202 2640 PB.6164.2 chr11 - 2521 8 novel_in_catalog TRIM5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 44 None 74 13 0 FALSE 0 0 NA C coding 493 1479 106 1584 PB.1425.1 chr2 - 1475 1 incomplete-splice_match MOB1A ENST00000396049.4 4885 6 1075 2336 no_subtype FALSE canonical NA NA NA None 22 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6164.1 chr11 - 2905 8 full-splice_match TRIM5 ENST00000380034.7 2991 8 4 82 no_subtype FALSE canonical NA NA 192 None 47 11 0 FALSE 0 0 NA C coding 493 1479 254 1732 PB.2072.1 chr3 + 2933 4 novel_not_in_catalog TGFBR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 248 None 4 13 0 TRUE 0 0 NA B coding 134 402 24 425 PB.4560.1 chr7 + 3270 14 novel_in_catalog SLC12A9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1980 None 6 7 0 FALSE 0 0 NA B coding 914 2742 123 2864 PB.4560.4 chr7 + 3272 15 novel_not_in_catalog SLC12A9 novel NA NA NA NA no_subtype FALSE canonical NA NA 1982 None 4 8 1 FALSE 0 0 NA B coding 914 2742 125 2866 PB.2797.4 chr4 + 2843 2 novel_not_in_catalog KLF3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2658 None 2 23 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.76.1 chr1 - 1870 1 antisense novelGene_DDI2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7014.1 chr12 + 3067 15 full-splice_match PDE1B ENST00000550620.1 2150 15 8 -925 no_subtype FALSE canonical NA NA 1688 None 2 5 0 FALSE 0 0 NA A coding 516 1548 121 1668 PB.8806.1 chr16 - 775 5 full-splice_match APRT ENST00000378364.7 947 5 35 137 no_subtype FALSE canonical NA NA 90 None 3 4 0 FALSE 0 0 NA A coding 180 540 11 550 PB.2797.1 chr4 + 1500 6 full-splice_match KLF3 ENST00000261438.9 5122 6 216 3406 no_subtype FALSE canonical NA NA 945 None 2 1 0 FALSE 0 0 NA C coding 345 1035 90 1124 PB.900.1 chr1 + 3336 1 incomplete-splice_match XPR1 ENST00000367590.8 8474 15 5076 63 no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6717.1 chr11 + 5224 19 novel_not_in_catalog SLC37A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2747 None 2 27 2 TRUE 0 0 NA A coding 501 1503 64 1566 PB.10315.1 chr20 - 6537 2 antisense novelGene_HCK_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 6077 None 2 50 1 FALSE 0 0 NA A coding 157 471 5441 5911 PB.5636.1 chr9 - 1559 1 full-splice_match TMEM203 ENST00000343666.5 1557 1 -7 5 no_subtype FALSE canonical NA NA NA None 8 6 0 FALSE 0 0 NA A coding 136 408 232 639 PB.8159.1 chr15 - 2574 12 full-splice_match VWA9 ENST00000573314.5 2615 12 28 13 no_subtype FALSE canonical NA NA 313 None 2 15 0 FALSE 0 0 NA A coding 518 1554 376 1929 PB.2419.1 chr3 - 2716 2 antisense novelGene_SLC15A2_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 369 None 2 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7535.2 chr13 - 3640 21 full-splice_match RBM26 ENST00000438724.5 5152 21 402 1110 no_subtype FALSE canonical NA NA 116 None 2 2 0 FALSE 0 0 NA C coding 983 2949 46 2994 PB.4547.1 chr7 + 1489 6 full-splice_match CNPY4 ENST00000262932.4 1502 6 2 11 no_subtype FALSE canonical NA NA 713 None 2 7 0 FALSE 0 0 NA A coding 226 678 197 874 PB.4231.5 chr6 - 1793 1 incomplete-splice_match TAGAP ENST00000367066.7 3887 10 1561 534 no_subtype FALSE canonical NA NA NA None 3 4 0 FALSE 0 0 NA C coding 223 669 297 965 PB.7535.1 chr13 - 3629 21 novel_in_catalog RBM26 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 90 None 2 6 0 FALSE 0 0 NA C coding 988 2964 20 2983 PB.4231.8 chr6 - 3018 9 full-splice_match TAGAP ENST00000326965.6 3051 9 167 -134 no_subtype FALSE canonical NA NA 107 None 2 4 0 FALSE 0 0 NA C coding 553 1659 533 2191 PB.946.29 chr1 + 4608 31 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3320 None 6 13 0 TRUE 0 0 NA B coding 1192 3576 18 3593 PB.98.1 chr1 - 1179 7 fusion AKR7L,AKR7A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 235 None 2 13 0 FALSE 0 0 NA A coding 161 483 532 1014 PB.9338.2 chr17 - 2750 10 full-splice_match SLC39A11 ENST00000542342.6 2752 10 1 1 no_subtype FALSE canonical NA NA 77 None 6 7 0 FALSE 0 0 NA C coding 342 1026 89 1114 PB.3399.5 chr5 + 3742 25 novel_not_in_catalog PAM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2920 None 2 8 1 TRUE 0 0 NA B coding 898 2694 242 2935 PB.9338.1 chr17 - 2744 11 novel_not_in_catalog SLC39A11 novel NA NA NA NA no_subtype TRUE canonical NA NA 92 None 24 7 0 TRUE 0 0 NA C coding 335 1005 104 1108 PB.1563.1 chr2 + 2990 4 novel_not_in_catalog DBI novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2695 None 2 11 1 TRUE 0 0 NA C coding 123 369 85 453 PB.11130.1 chrX + 1566 1 full-splice_match SOWAHD ENST00000343905.4 1552 1 20 -34 no_subtype FALSE canonical NA NA NA None 3 3 0 FALSE 0 0 NA A coding 315 945 36 980 PB.4595.2 chr7 + 1604 10 novel_in_catalog HBP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1434 None 14 0 0 FALSE 0 0 NA C coding 524 1572 20 1591 PB.5520.1 chr9 - 643 7 full-splice_match RPL12 ENST00000361436.9 633 7 -12 2 no_subtype FALSE canonical NA NA 137 None 3 0 0 FALSE 0 0 NA A coding 165 495 101 595 PB.545.3 chr1 + 3421 18 full-splice_match AMPD2 ENST00000256578.7 3899 18 479 -1 no_subtype FALSE canonical NA NA 2311 None 3 1 0 FALSE 0 0 NA C coding 825 2475 44 2518 PB.8648.1 chr16 - 1198 6 full-splice_match CFAP20 ENST00000262498.7 1354 6 148 8 no_subtype FALSE canonical NA NA 271 None 4 2 0 FALSE 0 0 NA A coding 193 579 188 766 PB.4211.1 chr6 + 3000 1 novel_in_catalog ARID1B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA B coding 101 303 1482 1784 PB.2311.1 chr3 - 2914 16 full-splice_match GBE1 ENST00000429644.6 3461 16 522 25 no_subtype FALSE canonical NA NA 265 None 2 6 0 FALSE 0 0 NA C coding 702 2106 123 2228 PB.8300.9 chr15 + 2749 19 novel_not_in_catalog FES novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2392 None 3 3 1 TRUE 0 0 NA C coding 410 1230 51 1280 PB.3399.2 chr5 + 3945 27 novel_not_in_catalog PAM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3120 None 2 7 2 TRUE 0 0 NA B coding 960 2880 417 3296 PB.3129.1 chr4 - 1118 5 full-splice_match HMGB2 ENST00000296503.9 1889 5 761 10 no_subtype FALSE canonical NA NA 93 None 3 2 0 FALSE 0 0 NA A coding 209 627 114 740 PB.5675.14 chr10 + 5948 4 genic_intron novelGene_81 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1084 None 2 44 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2471.1 chr3 - 1548 13 novel_not_in_catalog MRPL3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 124 None 4 5 1 TRUE 0 0 NA B coding 348 1044 33 1076 PB.3498.1 chr5 + 3641 7 full-splice_match SMAD5 ENST00000545620.5 6937 7 60 3236 no_subtype FALSE canonical NA NA 1479 None 20 16 1 FALSE 0 0 NA A coding 462 1386 235 1620 PB.4742.3 chr7 + 1497 1 incomplete-splice_match GIMAP4 ENST00000255945.3 2060 3 559 5 no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA C coding 190 570 34 603 PB.4953.1 chr8 - 5941 3 full-splice_match VCPIP1 ENST00000310421.4 9942 3 139 3862 no_subtype FALSE canonical NA NA 2830 None 2 20 0 FALSE 0 0 NA A coding 1222 3666 121 3786 PB.5443.1 chr9 - 1125 5 full-splice_match INIP ENST00000374242.8 4233 5 128 2980 no_subtype FALSE canonical NA NA 122 None 8 0 0 FALSE 0 0 NA A coding 104 312 179 490 PB.1835.1 chr2 - 2966 2 genic_intron novelGene_1395 novel NA NA NA NA no_subtype FALSE canonical NA NA 2407 None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9689.1 chr19 - 4071 22 full-splice_match DPP9 ENST00000262960.13 4295 22 67 157 no_subtype TRUE canonical NA NA 123 None 9 3 0 FALSE 0 0 NA A coding 892 2676 212 2887 PB.90.4 chr1 - 3852 12 incomplete-splice_match PADI2 ENST00000375486.8 4345 16 491 2 5prime_fragment FALSE canonical NA NA 102 None 2 10 0 FALSE 0 0 NA C coding 485 1455 114 1568 PB.90.5 chr1 - 4351 16 full-splice_match PADI2 ENST00000375486.8 4345 16 -16 10 no_subtype FALSE canonical NA NA 172 None 167 14 0 FALSE 0 0 NA C coding 665 1995 81 2075 PB.9203.1 chr17 + 1816 14 full-splice_match CDK5RAP3 ENST00000338399.8 1866 14 86 -36 no_subtype FALSE canonical NA NA 1475 None 37 1 0 FALSE 0 0 NA A coding 506 1518 21 1538 PB.7832.1 chr14 + 2648 4 full-splice_match CIPC ENST00000361786.6 4486 4 155 1683 no_subtype FALSE canonical NA NA 468 None 10 7 0 FALSE 0 0 NA A coding 399 1197 163 1359 PB.90.8 chr1 - 2834 1 novel_in_catalog PADI2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 8 15 0 FALSE 0 0 NA C coding 109 327 792 1118 PB.2657.1 chr3 - 3889 11 full-splice_match MASP1 ENST00000296280.10 4015 11 121 5 no_subtype TRUE canonical NA NA 110 None 18 8 0 FALSE 0 0 NA A coding 728 2184 106 2289 PB.7801.5 chr14 - 3634 12 novel_not_in_catalog NUMB novel NA NA NA NA no_subtype FALSE canonical NA NA 177 None 4 6 0 FALSE 0 0 NA C coding 592 1776 499 2274 PB.4025.1 chr6 - 1729 19 novel_in_catalog RARS2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 76 None 4 0 0 FALSE 0 0 NA A coding 403 1209 492 1700 PB.3517.1 chr5 + 2114 7 full-splice_match UBE2D2 ENST00000398733.7 2702 7 584 4 no_subtype FALSE canonical NA NA 440 None 25 4 0 FALSE 0 0 NA C coding 147 441 43 483 PB.7801.4 chr14 - 2582 2 novel_not_in_catalog NUMB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 41 None 2 10 1 TRUE 0 0 NA C coding 135 405 818 1222 PB.1684.2 chr2 + 2668 10 novel_in_catalog SSB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2287 None 3 16 0 FALSE 0 0 NA C coding 271 813 1561 2373 PB.1684.3 chr2 + 1547 11 novel_in_catalog SSB novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1156 None 2 8 0 FALSE 0 0 NA C coding 370 1110 133 1242 PB.1684.1 chr2 + 1633 12 full-splice_match SSB ENST00000260956.8 1709 12 68 8 no_subtype FALSE canonical NA NA 1244 None 73 7 0 FALSE 0 0 NA C coding 408 1224 107 1330 PB.861.2 chr1 + 1733 9 full-splice_match FMO3 ENST00000367755.8 2087 9 62 292 no_subtype FALSE canonical NA NA 1305 None 2 1 0 FALSE 0 0 NA C coding 532 1596 50 1645 PB.2469.4 chr3 + 3698 29 novel_not_in_catalog ATP2C1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2923 None 4 9 1 TRUE 0 0 NA C coding 919 2757 295 3051 PB.3944.2 chr6 + 3361 24 novel_in_catalog TMEM63B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2544 None 3 8 0 FALSE 0 0 NA C coding 832 2496 238 2733 PB.3944.1 chr6 + 3186 24 full-splice_match TMEM63B ENST00000323267.10 3198 24 8 4 no_subtype TRUE canonical NA NA 2363 None 25 8 0 FALSE 0 0 NA C coding 832 2496 57 2552 PB.10598.3 chr21 + 5548 34 novel_not_in_catalog TRPM2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5098 None 3 12 1 TRUE 0 0 NA C coding 1503 4509 182 4690 PB.10598.2 chr21 + 5889 34 novel_not_in_catalog TRPM2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4891 None 3 35 2 TRUE 0 0 NA C coding 1456 4368 135 4502 PB.10598.1 chr21 + 5590 33 full-splice_match TRPM2 ENST00000300482.9 5989 33 8 391 no_subtype TRUE canonical NA NA 4591 None 3 14 1 FALSE 0 0 NA C coding 1503 4509 206 4714 PB.4557.1 chr7 + 1509 9 full-splice_match PCOLCE ENST00000223061.5 1702 9 186 7 no_subtype FALSE canonical NA NA 1277 None 39 2 1 FALSE 0 0 NA A coding 449 1347 95 1441 PB.5889.1 chr10 - 2635 11 novel_not_in_catalog ATAD1 novel NA NA NA NA no_subtype TRUE canonical NA NA 50 None 31 12 0 TRUE 0 0 NA A coding 361 1083 64 1146 PB.6971.4 chr12 + 3040 7 novel_not_in_catalog ATF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1401 None 2 22 1 TRUE 0 0 NA C coding 271 813 731 1543 PB.8957.1 chr17 - 1426 1 antisense novelGene_ALKBH5_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 35 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10624.9 chr22 - 2907 9 novel_in_catalog DGCR2 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 268 None 12 12 0 FALSE 0 0 NA C coding 467 1401 190 1590 PB.10624.8 chr22 - 4279 9 novel_in_catalog DGCR2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 267 None 3 27 0 FALSE 0 0 NA C coding 505 1515 189 1703 PB.1251.2 chr2 + 2632 2 full-splice_match LBH ENST00000484150.1 510 2 200 -2322 no_subtype FALSE canonical NA NA 42 None 8 9 0 FALSE 0 0 NA C coding 127 381 1838 2218 PB.1251.3 chr2 + 2233 1 incomplete-splice_match LBH ENST00000395323.7 2933 3 695 6 no_subtype FALSE canonical NA NA NA None 10 14 0 FALSE 0 0 NA C coding 127 381 1438 1818 PB.10624.4 chr22 - 4268 9 novel_in_catalog DGCR2 novel NA NA NA NA no_combination_of_known_junctions TRUE non_canonical NA NA 297 None 2 31 0 FALSE 0 0 NA C coding 491 1473 219 1691 PB.10624.6 chr22 - 4445 10 full-splice_match DGCR2 ENST00000263196.11 4480 10 30 5 no_subtype FALSE non_canonical NA NA 297 None 43 22 0 FALSE 0 0 NA C coding 550 1650 219 1868 PB.7723.5 chr14 + 2670 2 genic_intron novelGene_538 novel NA NA NA NA no_subtype TRUE canonical NA NA 1493 None 3 40 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10624.2 chr22 - 2809 1 incomplete-splice_match DGCR2 ENST00000537045.5 4361 9 1544 9 no_subtype FALSE canonical NA NA NA None 3 21 0 FALSE 0 0 NA C coding 123 369 776 1144 PB.5431.1 chr9 - 4026 25 novel_in_catalog PTPN3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 85 None 2 4 0 FALSE 0 0 NA C coding 868 2604 103 2706 PB.5431.2 chr9 - 4181 26 full-splice_match PTPN3 ENST00000374541.3 6703 26 -27 2549 no_subtype FALSE canonical NA NA 115 None 7 0 0 FALSE 0 0 NA C coding 913 2739 133 2871 PB.2654.12 chr3 + 3054 9 novel_not_in_catalog EIF4A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 964 None 2 19 2 TRUE 0 0 NA C coding 240 720 326 1045 PB.2191.4 chr3 - 2789 21 novel_not_in_catalog USP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 110 None 2 0 0 TRUE 0 0 NA B coding 810 2430 10 2439 PB.6675.1 chr11 + 2725 2 genic ARCN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 306 None 7 14 0 TRUE 0 0 NA C coding 99 297 883 1179 PB.11102.1 chrX - 1373 5 full-splice_match PSMD10 ENST00000361815.9 768 5 16 -621 no_subtype FALSE canonical NA NA 120 None 2 4 0 FALSE 0 0 NA C coding 151 453 7 459 PB.314.4 chr1 - 2995 8 novel_in_catalog ELOVL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1706 None 5 13 0 FALSE 0 0 NA C coding 144 432 1721 2152 PB.314.2 chr1 - 3107 8 full-splice_match ELOVL1 ENST00000470769.5 1215 8 -1424 -468 no_subtype FALSE canonical NA NA 1744 None 42 14 0 FALSE 0 0 NA C coding 279 837 1759 2595 PB.8656.1 chr16 - 3063 13 full-splice_match CDH11 ENST00000268603.8 6857 13 131 3663 no_subtype FALSE canonical NA NA 188 None 13 0 0 FALSE 0 0 NA A coding 796 2388 486 2873 PB.2125.1 chr3 - 1344 4 full-splice_match HIGD1A ENST00000418900.6 1322 4 4 -26 no_subtype FALSE canonical NA NA 49 None 14 8 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.314.1 chr1 - 1478 8 full-splice_match ELOVL1 ENST00000372458.7 1477 8 -7 6 no_subtype FALSE canonical NA NA 111 None 55 8 0 FALSE 0 0 NA C coding 279 837 126 962 PB.7020.1 chr12 - 872 11 full-splice_match SARNP ENST00000336133.7 926 11 34 20 no_subtype FALSE canonical NA NA 57 None 4 0 0 FALSE 0 0 NA A coding 210 630 22 651 PB.946.25 chr1 + 2815 22 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2695 None 2 6 0 TRUE 0 0 NA B coding 496 1488 73 1560 PB.523.2 chr1 - 3008 9 novel_not_in_catalog DPH5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 69 None 2 26 0 TRUE 0 0 NA B coding 285 855 95 949 PB.6194.2 chr11 + 2728 15 novel_in_catalog ZNF143 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1743 None 2 3 0 FALSE 0 0 NA C coding 584 1752 73 1824 PB.6194.1 chr11 + 2635 16 full-splice_match ZNF143 ENST00000396602.6 2947 16 60 252 no_subtype FALSE canonical NA NA 1892 None 12 6 0 FALSE 0 0 NA C coding 638 1914 60 1973 PB.523.1 chr1 - 2996 8 novel_not_in_catalog DPH5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 69 None 5 23 1 TRUE 0 0 NA B coding 284 852 95 946 PB.9480.1 chr18 + 3910 12 novel_not_in_catalog RALBP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1992 None 2 11 0 TRUE 0 0 NA C coding 655 1965 286 2250 PB.9480.2 chr18 + 3773 10 full-splice_match RALBP1 ENST00000019317.8 4368 10 75 520 no_subtype FALSE canonical NA NA 1849 None 2 5 0 FALSE 0 0 NA C coding 655 1965 149 2113 PB.9480.3 chr18 + 3841 10 full-splice_match RALBP1 ENST00000383432.7 4224 10 -138 521 no_subtype FALSE canonical NA NA 1916 None 2 8 0 FALSE 0 0 NA C coding 655 1965 216 2180 PB.9480.4 chr18 + 3282 9 novel_in_catalog RALBP1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1356 None 2 7 0 FALSE 0 0 NA C coding 502 1506 115 1620 PB.9480.7 chr18 + 1428 1 incomplete-splice_match RALBP1 ENST00000383432.7 4224 10 2276 521 no_subtype FALSE canonical NA NA NA None 4 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2625.4 chr3 + 4276 6 novel_not_in_catalog AP2M1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2689 None 2 18 1 TRUE 0 0 NA C coding 148 444 147 590 PB.2625.5 chr3 + 1919 10 novel_in_catalog AP2M1 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 1313 None 3 12 1 FALSE 0 0 NA C coding 251 753 693 1445 PB.2654.13 chr3 + 2695 11 novel_in_catalog EIF4A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1112 None 2 4 0 FALSE 0 0 NA C coding 362 1086 34 1119 PB.9755.1 chr19 + 1276 3 full-splice_match ICAM4 ENST00000380770.3 1211 3 14 -79 no_subtype FALSE canonical NA NA 729 None 2 2 0 FALSE 0 0 NA A coding 271 813 33 845 PB.2337.1 chr3 + 1585 7 novel_not_in_catalog TMEM45A novel NA NA NA NA no_subtype FALSE canonical NA NA 1068 None 2 7 0 TRUE 0 0 NA A coding 275 825 335 1159 PB.2625.2 chr3 + 1958 11 novel_in_catalog AP2M1 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 1354 None 68 4 1 FALSE 0 0 NA C coding 251 753 734 1486 PB.2625.3 chr3 + 1457 8 novel_in_catalog AP2M1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 849 None 2 5 1 FALSE 0 0 NA C coding 251 753 229 981 PB.11128.1 chrX + 2729 2 antisense novelGene_SEPT6_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2156 None 3 19 1 FALSE 0 0 NA A coding 100 300 1600 1899 PB.5908.1 chr10 + 2813 16 novel_not_in_catalog KIF20B novel NA NA NA NA no_subtype TRUE canonical NA NA 1851 None 2 9 0 TRUE 0 0 NA B coding 582 1746 181 1926 PB.5396.1 chr9 + 1157 6 full-splice_match NANS ENST00000210444.5 1170 6 10 3 no_subtype FALSE canonical NA NA 930 None 8 2 0 FALSE 0 0 NA C coding 359 1077 61 1137 PB.3507.1 chr5 - 3495 11 full-splice_match ETF1 ENST00000360541.9 3742 11 135 112 no_subtype FALSE canonical NA NA 69 None 36 4 0 FALSE 0 0 NA A coding 437 1311 88 1398 PB.941.1 chr1 + 3937 22 fusion CFHR1,CFH novel NA NA NA NA no_subtype FALSE canonical NA NA 3555 None 61 1 0 FALSE 0 0 NA A coding 1231 3693 63 3755 PB.946.26 chr1 + 2575 25 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2536 None 2 11 2 TRUE 0 0 NA B coding 616 1848 728 2575 PB.7094.4 chr12 - 2974 2 novel_not_in_catalog TMBIM4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2673 None 39 20 0 TRUE 0 0 NA C coding 99 297 22 318 PB.10572.14 chr21 + 2751 1 novel_in_catalog MX2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA C coding 105 315 815 1129 PB.10572.13 chr21 + 1504 7 novel_in_catalog MX2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 837 None 2 2 0 FALSE 0 0 NA C coding 336 1008 70 1077 PB.3751.1 chr6 - 1769 3 genic_intron novelGene_127 novel NA NA NA NA no_subtype TRUE canonical NA NA 1646 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7094.2 chr12 - 1432 7 full-splice_match TMBIM4 ENST00000358230.7 2952 7 69 1451 no_subtype FALSE canonical NA NA 149 None 31 12 0 FALSE 0 0 NA C coding 238 714 53 766 PB.6073.1 chr10 + 2788 4 antisense novelGene_OAT_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2744 None 2 30 1 FALSE 0 0 NA A coding 119 357 821 1177 PB.3932.1 chr6 - 5550 25 novel_in_catalog CUL7 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 100 None 2 20 3 FALSE 0 0 NA A coding 977 2931 2550 5480 PB.7607.1 chr14 - 2824 8 novel_in_catalog METTL3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 186 None 3 7 0 FALSE 0 0 NA A coding 305 915 87 1001 PB.1766.2 chr2 - 3942 8 full-splice_match STK17B ENST00000263955.8 5287 8 5 1340 no_subtype FALSE canonical NA NA 238 None 3 20 0 FALSE 0 0 NA C coding 372 1116 283 1398 PB.1766.1 chr2 - 2778 1 incomplete-splice_match STK17B ENST00000263955.8 5287 8 1168 1342 no_subtype FALSE canonical NA NA NA None 15 21 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7456.1 chr13 + 1611 1 incomplete-splice_match AKAP11 ENST00000025301.3 9920 13 2826 5484 no_subtype FALSE canonical NA NA NA None 2 1 0 FALSE 0 0 NA B coding 530 1590 20 1609 PB.9340.1 chr17 - 2801 3 full-splice_match FAM104A ENST00000403627.7 2798 3 -19 16 no_subtype FALSE canonical NA NA 301 None 84 5 0 FALSE 0 0 NA A coding 120 360 279 638 PB.1091.1 chr1 + 2786 16 novel_not_in_catalog ADCK3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1719 None 70 8 0 TRUE 0 0 NA B coding 647 1941 61 2001 PB.5714.1 chr10 + 2628 15 full-splice_match APBB1IP ENST00000376236.8 2771 15 138 5 no_subtype FALSE canonical NA NA 1790 None 4 4 0 FALSE 0 0 NA C coding 666 1998 318 2315 PB.5714.2 chr10 + 1795 8 novel_in_catalog APBB1IP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 940 None 2 10 0 FALSE 0 0 NA C coding 329 987 128 1114 PB.3360.10 chr5 + 2610 8 full-splice_match VCAN ENST00000513016.5 8483 8 5849 24 no_subtype FALSE canonical NA NA 1604 None 41 0 0 FALSE 0 0 NA C coding 538 1614 116 1729 PB.831.1 chr1 - 1680 7 full-splice_match TMCO1 ENST00000392129.10 1946 7 43 223 no_subtype FALSE canonical NA NA 178 None 2 8 0 FALSE 0 0 NA C coding 188 564 109 672 PB.5714.5 chr10 + 3068 14 novel_not_in_catalog APBB1IP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2977 None 3 14 4 TRUE 0 0 NA C coding 393 1179 3 1181 PB.6993.2 chr12 + 1658 3 novel_not_in_catalog MFSD5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 73 None 3 2 1 TRUE 0 0 NA C coding 475 1425 17 1441 PB.6993.3 chr12 + 1717 2 full-splice_match MFSD5 ENST00000552097.1 427 2 -94 -1196 no_subtype FALSE canonical NA NA 129 None 2 2 1 FALSE 0 0 NA C coding 450 1350 148 1497 PB.6669.1 chr11 + 1671 8 novel_in_catalog UBE4A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1053 None 2 2 0 FALSE 0 0 NA C coding 395 1185 130 1314 PB.6669.2 chr11 + 3815 20 full-splice_match UBE4A ENST00000252108.7 6103 20 49 2239 no_subtype FALSE canonical NA NA 3156 None 23 7 0 FALSE 0 0 NA C coding 1066 3198 83 3280 PB.6669.3 chr11 + 6216 22 novel_not_in_catalog UBE4A novel NA NA NA NA no_subtype FALSE canonical NA NA 3323 None 3 25 0 TRUE 0 0 NA C coding 1066 3198 250 3447 PB.6669.4 chr11 + 2665 1 incomplete-splice_match UBE4A ENST00000431736.6 6061 20 3392 5 no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10903.2 chrX - 1462 2 antisense novelGene_ZFX_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1425 None 2 9 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.10903.1 chrX - 3176 2 antisense novelGene_ZFX_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 3094 None 7 23 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1610.1 chr2 - 1665 2 full-splice_match CXCR4 ENST00000241393.3 1682 2 16 1 no_subtype FALSE canonical NA NA 104 None 15 5 0 FALSE 0 0 NA A coding 352 1056 90 1145 PB.533.1 chr1 + 2859 16 novel_not_in_catalog GPSM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2150 None 2 12 0 TRUE 0 0 NA B coding 684 2052 328 2379 PB.5734.1 chr10 - 1170 1 full-splice_match C1DP1 ENST00000426049.1 402 1 -64 -704 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A coding 111 333 152 484 PB.1758.1 chr2 + 1096 3 novel_not_in_catalog AC067945.2 novel NA NA NA NA no_subtype FALSE canonical NA NA 276 None 2 5 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.1831.1 chr2 - 2736 3 novel_in_catalog PLEKHM3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 142 None 3 6 0 FALSE 0 0 NA A coding 523 1569 461 2029 PB.3804.6 chr6 - 4342 6 novel_in_catalog DDX39B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 116 None 5 18 0 FALSE 0 0 NA C coding 290 870 249 1118 PB.2706.1 chr4 + 2153 9 full-splice_match MAEA ENST00000303400.8 2222 9 43 26 no_subtype FALSE canonical NA NA 1115 None 4 1 0 FALSE 0 0 NA A coding 396 1188 21 1208 PB.10163.1 chr19 + 1289 6 novel_not_in_catalog TSEN34 novel NA NA NA NA no_subtype FALSE canonical NA NA 799 None 4 3 0 TRUE 0 0 NA B coding 310 930 55 984 PB.10163.3 chr19 + 1598 4 novel_not_in_catalog RPS9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 964 None 6 6 1 TRUE 0 0 NA B coding 156 468 29 496 PB.10163.2 chr19 + 1382 6 novel_not_in_catalog TSEN34 novel NA NA NA NA no_subtype FALSE canonical NA NA 891 None 4 3 0 TRUE 0 0 NA B coding 310 930 147 1076 PB.5767.1 chr10 - 3205 8 full-splice_match NCOA4 ENST00000585056.5 2124 8 0 -1081 no_subtype FALSE canonical NA NA 90 None 2 18 1 FALSE 0 0 NA C coding 514 1542 161 1702 PB.6983.1 chr12 - 1721 8 incomplete-splice_match KRT8 ENST00000293308.11 1882 9 134 27 5prime_fragment FALSE canonical NA NA 386 None 477 5 0 FALSE 0 0 NA A coding 483 1449 63 1511 PB.6707.2 chr11 + 1941 2 genic RP11-335F8.2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 912 None 4 8 1 FALSE 0 0 NA A coding 108 324 672 995 PB.3072.1 chr4 + 3197 8 full-splice_match EDNRA ENST00000324300.9 4135 8 163 775 no_subtype FALSE canonical NA NA 1495 None 6 12 0 FALSE 0 0 NA A coding 427 1281 353 1633 PB.154.1 chr1 + 2846 9 full-splice_match LDLRAP1 ENST00000374338.4 2940 9 88 6 no_subtype FALSE canonical NA NA 813 None 115 13 0 FALSE 0 0 NA C coding 308 924 32 955 PB.154.2 chr1 + 3093 11 novel_not_in_catalog LDLRAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1058 None 2 13 1 TRUE 0 0 NA C coding 263 789 412 1200 PB.154.3 chr1 + 2542 4 full-splice_match LDLRAP1 ENST00000484476.5 657 4 -3 -1882 no_subtype FALSE canonical NA NA 507 None 7 10 0 FALSE 0 0 NA C coding 138 414 236 649 PB.1557.1 chr2 - 3233 16 full-splice_match SLC35F5 ENST00000245680.6 4412 16 189 990 no_subtype FALSE canonical NA NA 265 None 2 11 0 FALSE 0 0 NA A coding 523 1569 226 1794 PB.6326.2 chr11 - 3212 1 antisense novelGene_PTPRJ_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1110.3 chr1 - 3343 25 novel_not_in_catalog TTC13 novel NA NA NA NA no_subtype FALSE canonical NA NA 268 None 4 20 0 TRUE 0 0 NA B coding 177 531 502 1032 PB.6326.1 chr11 - 3103 3 antisense novelGene_PTPRJ_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2052 None 2 17 0 FALSE 0 0 NA B coding 113 339 1370 1708 PB.8674.1 chr16 - 1636 8 full-splice_match ATP6V0D1 ENST00000290949.7 1716 8 69 11 no_subtype TRUE canonical NA NA 212 None 150 5 0 FALSE 0 0 NA C coding 351 1053 83 1135 PB.8674.2 chr16 - 5363 7 novel_not_in_catalog ATP6V0D1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 189 None 2 35 2 TRUE 0 0 NA C coding 210 630 60 689 PB.10433.7 chr20 - 3144 13 novel_not_in_catalog STAU1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 196 None 2 5 0 TRUE 0 0 NA C coding 496 1488 305 1792 PB.10379.1 chr20 - 2535 1 genic_intron novelGene_385 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 15 0 FALSE 0 0 NA A coding 130 390 317 706 PB.6267.2 chr11 + 3500 19 novel_not_in_catalog CAPRIN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2144 None 2 6 0 TRUE 0 0 NA C coding 694 2082 144 2225 PB.6267.3 chr11 + 3350 19 novel_not_in_catalog CAPRIN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2158 None 2 8 0 TRUE 0 0 NA C coding 709 2127 94 2220 PB.8026.1 chr15 - 2882 1 incomplete-splice_match ZNF106 ENST00000263805.8 10460 19 7573 6 no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6267.1 chr11 + 4053 19 full-splice_match CAPRIN1 ENST00000341394.8 4108 19 49 6 no_subtype FALSE canonical NA NA 2205 None 60 9 0 FALSE 0 0 NA C coding 709 2127 141 2267 PB.606.3 chr1 + 3656 2 novel_not_in_catalog MAN1A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1711 None 3 25 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.6267.7 chr11 + 2674 14 novel_in_catalog CAPRIN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1462 None 2 6 0 FALSE 0 0 NA C coding 410 1230 295 1524 PB.6267.4 chr11 + 3900 18 full-splice_match CAPRIN1 ENST00000532820.5 3438 18 229 -691 no_subtype FALSE canonical NA NA 2047 None 61 9 0 FALSE 0 0 NA C coding 656 1968 142 2109 PB.1750.1 chr2 - 1701 14 full-splice_match HIBCH ENST00000359678.9 1939 14 235 3 no_subtype FALSE canonical NA NA 95 None 16 4 0 FALSE 0 0 NA A coding 386 1158 61 1218 PB.5773.2 chr10 - 3418 6 full-splice_match ERCC6 ENST00000447839.6 3411 6 -14 7 no_subtype FALSE canonical NA NA 93 None 2 4 0 FALSE 0 0 NA A coding 1061 3183 108 3290 PB.1333.1 chr2 - 1913 10 novel_not_in_catalog GPR75-ASB3 novel NA NA NA NA no_subtype FALSE canonical NA NA 162 None 2 13 0 FALSE 0 0 NA A coding 518 1554 176 1729 PB.1366.2 chr2 - 1558 1 genic_intron novelGene_596 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4655.1 chr7 - 1893 10 full-splice_match ZC3HC1 ENST00000358303.8 1972 10 67 12 no_subtype FALSE canonical NA NA 164 None 8 7 0 FALSE 0 0 NA A coding 502 1506 19 1524 PB.4372.1 chr7 + 2818 10 novel_not_in_catalog EEPD1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2108 None 21 4 0 TRUE 0 0 NA A coding 569 1707 599 2305 PB.3586.1 chr5 - 2839 19 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 131 None 7 4 0 TRUE 0 0 NA B coding 636 1908 168 2075 PB.1994.2 chr3 + 1542 1 novel_in_catalog BRK1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1994.1 chr3 + 1138 3 full-splice_match BRK1 ENST00000530758.1 1233 3 92 3 no_subtype FALSE canonical NA NA 219 None 12 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4316.1 chr7 + 1507 5 antisense novelGene_MACC1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 368 None 2 14 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.9398.5 chr17 + 3194 10 full-splice_match SEPT9 ENST00000541152.6 3026 10 -180 12 no_subtype FALSE canonical NA NA 1134 None 9 20 0 FALSE 0 0 NA C coding 335 1005 263 1267 PB.9398.6 chr17 + 3086 11 novel_not_in_catalog SEPT9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1025 None 2 19 2 TRUE 0 0 NA C coding 335 1005 154 1158 PB.2762.1 chr4 + 3516 5 novel_not_in_catalog MED28 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1494 None 6 18 1 TRUE 0 0 NA B coding 178 534 18 551 PB.9398.1 chr17 + 3785 13 novel_not_in_catalog SEPT9 novel NA NA NA NA no_subtype FALSE canonical NA NA 1724 None 49 15 0 TRUE 0 0 NA C coding 586 1758 100 1857 PB.9398.2 chr17 + 3675 11 novel_in_catalog SEPT9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1607 None 2 17 1 FALSE 0 0 NA C coding 422 1266 475 1740 PB.9398.3 chr17 + 3775 11 full-splice_match SEPT9 ENST00000423034.6 3984 11 198 11 no_subtype FALSE canonical NA NA 1714 None 43 14 0 FALSE 0 0 NA C coding 579 1737 111 1847 PB.469.10 chr1 - 1483 2 full-splice_match GBP1 ENST00000484970.1 829 2 -554 -100 no_subtype FALSE canonical NA NA 1214 None 3 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1366.1 chr2 - 1440 2 genic_intron novelGene_596 novel NA NA NA NA no_subtype FALSE canonical NA NA 320 None 2 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5459.1 chr9 - 7005 1 novel_in_catalog AKNA novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 33 0 FALSE 0 0 NA B coding 138 414 3361 3774 PB.7959.56 chr14 - 1484 8 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 16 4 TRUE 0 0 NA B coding 261 783 11 793 PB.4270.1 chr7 - 2178 1 genic_intron novelGene_21 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9642.1 chr19 + 2615 14 novel_not_in_catalog MUM1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2167 None 3 9 1 FALSE 0 0 NA B coding 710 2130 93 2222 PB.9642.2 chr19 + 4077 14 novel_in_catalog MUM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2171 None 5 18 0 FALSE 0 0 NA B coding 710 2130 97 2226 PB.2144.1 chr3 - 3724 2 novel_not_in_catalog FYCO1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 156 None 2 25 1 TRUE 0 0 NA A coding 102 306 101 406 PB.3519.1 chr5 + 1358 3 full-splice_match CXXC5 ENST00000511048.1 1892 3 31 503 no_subtype FALSE canonical NA NA 1130 None 2 1 0 FALSE 0 0 NA A coding 322 966 207 1172 PB.1868.1 chr2 + 2835 9 full-splice_match FAM134A ENST00000430297.6 4618 9 24 1759 no_subtype FALSE canonical NA NA 1127 None 4 8 0 FALSE 0 0 NA A coding 526 1578 164 1741 PB.5972.2 chr10 + 6831 9 novel_not_in_catalog HIF1AN novel NA NA NA NA no_subtype FALSE canonical NA NA 5561 None 6 40 0 TRUE 0 0 NA C coding 349 1047 17 1063 PB.10936.2 chrX + 1996 1 novel_in_catalog RP2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10936.1 chrX + 3687 5 full-splice_match RP2 ENST00000218340.3 3803 5 103 13 no_subtype FALSE canonical NA NA 1027 None 36 9 0 FALSE 0 0 NA C coding 350 1050 59 1108 PB.5972.1 chr10 + 1766 8 full-splice_match HIF1AN ENST00000299163.6 13011 8 90 11155 no_subtype FALSE canonical NA NA 1015 None 36 6 0 FALSE 0 0 NA C coding 349 1047 11 1057 PB.5316.1 chr9 - 2674 1 genic_intron novelGene_652 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA A coding 122 366 1789 2154 PB.8287.2 chr15 - 1458 9 novel_not_in_catalog IDH2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 199 None 2 4 1 FALSE 0 0 NA C coding 322 966 210 1175 PB.1960.2 chr2 + 3288 14 novel_not_in_catalog SEPT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1231 None 50 22 0 TRUE 0 0 NA C coding 361 1083 117 1199 PB.1960.1 chr2 + 3376 13 full-splice_match SEPT2 ENST00000391973.6 3701 13 318 7 no_subtype FALSE canonical NA NA 1325 None 7 22 0 FALSE 0 0 NA C coding 361 1083 211 1293 PB.8287.1 chr15 - 1737 11 full-splice_match IDH2 ENST00000330062.7 2694 11 15 942 no_subtype FALSE canonical NA NA 214 None 112 1 0 FALSE 0 0 NA C coding 452 1356 100 1455 PB.3418.5 chr5 - 2919 6 novel_not_in_catalog REEP5 novel NA NA NA NA no_subtype FALSE canonical NA NA 79 None 3 19 1 TRUE 0 0 NA B coding 75 225 304 528 PB.3418.4 chr5 - 2835 6 novel_not_in_catalog REEP5 novel NA NA NA NA no_subtype FALSE canonical NA NA 5 None 3 17 1 TRUE 0 0 NA B coding 75 225 230 454 PB.1960.5 chr2 + 2810 13 novel_not_in_catalog SEPT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1931 None 2 20 1 TRUE 0 0 NA C coding 361 1083 19 1101 PB.684.1 chr1 - 652 3 full-splice_match S100A10 ENST00000368811.7 1202 3 546 4 no_subtype FALSE canonical NA NA 93 None 6 1 0 FALSE 0 0 NA C coding 97 291 115 405 PB.2813.1 chr4 - 6288 30 incomplete-splice_match PDS5A ENST00000303538.12 7176 33 883 5 5prime_fragment FALSE canonical NA NA 86 None 2 15 0 FALSE 0 0 NA A coding 1153 3459 210 3668 PB.3418.8 chr5 - 1479 2 novel_in_catalog REEP5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 152 None 2 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3446.3 chr5 + 3071 7 novel_not_in_catalog PHAX novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2583 None 2 21 1 TRUE 0 0 NA B coding 394 1182 13 1194 PB.8010.1 chr15 - 2908 2 novel_not_in_catalog INO80 novel NA NA NA NA no_subtype FALSE canonical NA NA 1322 None 2 26 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.187.10 chr1 - 1382 7 novel_in_catalog WASF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 181 None 2 2 0 FALSE 0 0 NA C coding 275 825 225 1049 PB.187.11 chr1 - 2579 2 novel_in_catalog WASF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 181 None 3 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3865.1 chr6 + 3784 2 antisense novelGene_RP11-174N3.4_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1639 None 3 37 1 FALSE 0 0 NA A coding 137 411 2113 2523 PB.9982.2 chr19 + 3804 14 novel_not_in_catalog SAMD4B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2399 None 2 10 2 TRUE 0 0 NA B coding 694 2082 344 2425 PB.9982.1 chr19 + 3817 13 novel_in_catalog SAMD4B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2421 None 5 7 0 FALSE 0 0 NA B coding 694 2082 366 2447 PB.6384.1 chr11 - 1131 9 full-splice_match UBXN1 ENST00000301935.9 1153 9 17 5 no_subtype FALSE canonical NA NA 209 None 15 2 0 FALSE 0 0 NA C coding 297 891 151 1041 PB.3739.1 chr6 + 1552 1 incomplete-splice_match TMEM170B ENST00000379426.1 8362 3 2084 4727 no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9769.1 chr19 + 6909 10 novel_not_in_catalog DNM2 novel NA NA NA NA no_subtype TRUE canonical NA NA 4613 None 2 21 1 TRUE 0 0 NA C coding 428 1284 191 1474 PB.9769.2 chr19 + 3416 21 full-splice_match DNM2 ENST00000355667.10 3541 21 116 9 no_subtype FALSE canonical NA NA 2507 None 25 5 0 FALSE 0 0 NA C coding 712 2136 439 2574 PB.9769.3 chr19 + 3578 21 full-splice_match DNM2 ENST00000389253.8 3581 21 -13 16 no_subtype FALSE canonical NA NA 2668 None 15 4 0 FALSE 0 0 NA C coding 870 2610 126 2735 PB.9769.4 chr19 + 3626 20 full-splice_match DNM2 ENST00000359692.10 3588 20 -14 -24 no_subtype FALSE canonical NA NA 2695 None 3 6 0 FALSE 0 0 NA C coding 866 2598 165 2762 PB.7148.5 chr12 - 2708 11 novel_not_in_catalog POC1B novel NA NA NA NA no_subtype FALSE canonical NA NA 116 None 2 7 0 TRUE 0 0 NA C coding 321 963 320 1282 PB.9508.1 chr18 + 2817 1 genic_intron novelGene_203 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7892.1 chr14 - 1365 1 incomplete-splice_match CLMN ENST00000298912.8 12747 13 11160 223 no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4705.1 chr7 + 5944 1 antisense novelGene_HIPK2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 28 0 FALSE 0 0 NA A coding 115 345 5040 5384 PB.2107.2 chr3 + 1876 7 full-splice_match SLC25A38 ENST00000273158.8 2123 7 82 165 no_subtype FALSE canonical NA NA 1087 None 20 4 0 FALSE 0 0 NA C coding 304 912 296 1207 PB.3146.6 chr4 - 6363 11 novel_not_in_catalog ACSL1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1670 None 2 18 1 TRUE 0 0 NA C coding 365 1095 3743 4837 PB.4299.2 chr7 + 2639 16 incomplete-splice_match PHF14 ENST00000634607.1 3407 18 747 21 internal_fragment FALSE canonical NA NA 2445 None 2 2 0 FALSE 0 0 NA B coding 752 2256 262 2517 PB.4299.1 chr7 + 2628 18 novel_not_in_catalog PHF14 novel NA NA NA NA no_subtype FALSE canonical NA NA 2429 None 2 5 1 TRUE 0 0 NA B coding 443 1329 521 1849 PB.7467.1 chr13 + 4366 24 novel_not_in_catalog COG3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2444 None 5 8 0 TRUE 0 0 NA A coding 732 2196 276 2471 PB.1777.20 chr2 - 3125 11 novel_not_in_catalog SF3B1 novel NA NA NA NA no_subtype FALSE canonical NA NA 39 None 3 5 0 FALSE 0 0 NA C coding 344 1032 2093 3124 PB.11019.1 chrX + 1523 1 genic_intron novelGene_667 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10179.1 chr19 + 2579 5 full-splice_match ZNF583 ENST00000333201.13 4916 5 3 2334 no_subtype FALSE canonical NA NA 439 None 2 13 0 FALSE 0 0 NA A coding 569 1707 208 1914 PB.7252.1 chr12 - 2617 1 incomplete-splice_match PPTC7 ENST00000354300.4 4996 6 2375 5 no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8792.1 chr16 + 664 5 full-splice_match COX4I1 ENST00000253452.6 708 5 40 4 no_subtype FALSE canonical NA NA 403 None 9 3 0 FALSE 0 0 NA A coding 131 393 145 537 PB.10706.1 chr22 + 3288 21 full-splice_match SMTN ENST00000333137.11 3295 21 0 7 no_subtype FALSE canonical NA NA 2986 None 30 15 2 FALSE 0 0 NA C coding 915 2745 219 2963 PB.10706.2 chr22 + 1600 11 incomplete-splice_match SMTN ENST00000347557.6 3130 20 1528 2 internal_fragment FALSE canonical NA NA 1293 None 41 2 0 FALSE 0 0 NA C coding 461 1383 59 1441 PB.10706.4 chr22 + 1768 10 novel_in_catalog SMTN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1466 None 2 3 0 FALSE 0 0 NA C coding 516 1548 67 1614 PB.10706.5 chr22 + 2890 1 novel_in_catalog SMTN novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5663.1 chr10 + 2629 12 full-splice_match RBM17 ENST00000379888.8 2755 12 75 51 no_subtype FALSE canonical NA NA 1252 None 20 9 1 FALSE 0 0 NA C coding 401 1203 151 1353 PB.2424.2 chr3 + 3048 5 full-splice_match DTX3L ENST00000296161.8 5868 5 184 2636 no_subtype FALSE canonical NA NA 2158 None 31 8 0 FALSE 0 0 NA A coding 740 2220 6 2225 PB.6481.1 chr11 - 1891 11 full-splice_match CORO1B ENST00000341356.9 1881 11 9 -19 no_subtype FALSE canonical NA NA 100 None 34 1 0 FALSE 0 0 NA C coding 489 1467 103 1569 PB.6481.2 chr11 - 2128 12 novel_not_in_catalog CORO1B novel NA NA NA NA no_subtype FALSE canonical NA NA 149 None 29 2 1 FALSE 0 0 NA C coding 489 1467 341 1807 PB.6481.3 chr11 - 2069 12 novel_not_in_catalog CORO1B novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 6 1 0 FALSE 0 0 NA C coding 489 1467 281 1747 PB.2431.1 chr3 + 6977 1 full-splice_match RP11-67L2.2 ENST00000610128.2 5476 1 -1508 7 no_subtype FALSE canonical NA NA NA None 2 44 0 FALSE 0 0 NA A coding 123 369 1538 1906 PB.7904.1 chr14 + 2589 2 genic_intron novelGene_899 novel NA NA NA NA no_subtype FALSE canonical NA NA 2510 None 3 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1370.1 chr2 + 1269 9 full-splice_match MDH1 ENST00000233114.12 1650 9 370 11 no_subtype FALSE canonical NA NA 944 None 37 1 0 FALSE 0 0 NA C coding 334 1002 66 1067 PB.53.1 chr1 - 4241 14 novel_in_catalog CASZ1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 128 None 4 3 0 FALSE 0 0 NA A coding 1190 3570 80 3649 PB.2199.2 chr3 - 3113 10 novel_not_in_catalog GMPPB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 370 None 20 12 1 TRUE 0 0 NA C coding 360 1080 242 1321 PB.7071.2 chr12 - 1734 5 genic_intron novelGene_598 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 196 None 2 12 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.6438.1 chr11 + 2631 19 novel_not_in_catalog SCYL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2367 None 97 1 0 TRUE 0 0 NA B coding 808 2424 66 2489 PB.2199.3 chr3 - 1578 9 full-splice_match GMPPB ENST00000308388.6 1582 9 -22 26 no_subtype FALSE canonical NA NA 374 None 19 2 0 FALSE 0 0 NA C coding 360 1080 246 1325 PB.3422.2 chr5 - 4169 11 novel_not_in_catalog TRIM36 novel NA NA NA NA no_subtype FALSE canonical NA NA 299 None 2 18 0 FALSE 0 0 NA C coding 723 2169 273 2441 PB.8894.1 chr17 + 2827 12 novel_not_in_catalog SLC2A4 novel NA NA NA NA no_subtype TRUE canonical NA NA 2223 None 5 5 1 TRUE 0 0 NA A coding 509 1527 209 1735 PB.11081.1 chrX - 2569 19 full-splice_match BTK ENST00000308731.7 2579 19 4 6 no_subtype FALSE canonical NA NA 130 None 4 3 0 FALSE 0 0 NA A coding 659 1977 161 2137 PB.3422.1 chr5 - 4145 10 full-splice_match TRIM36 ENST00000513154.5 4218 10 55 18 no_subtype FALSE canonical NA NA 299 None 4 15 0 FALSE 0 0 NA C coding 716 2148 273 2420 PB.6936.1 chr12 - 2664 13 novel_not_in_catalog KANSL2 novel NA NA NA NA no_subtype TRUE canonical NA NA 66 None 2 8 0 TRUE 0 0 NA C coding 332 996 255 1250 PB.166.1 chr1 - 1652 6 novel_in_catalog ZNF683 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 110 None 2 1 0 FALSE 0 0 NA A coding 504 1512 125 1636 PB.1656.1 chr2 - 2820 16 novel_in_catalog BAZ2B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 229 None 2 2 0 FALSE 0 0 NA B coding 848 2544 275 2818 PB.1128.7 chr1 - 2071 17 incomplete-splice_match ARID4B ENST00000421364.5 5151 25 -41 3121 internal_fragment FALSE canonical NA NA 407 None 3 1 0 FALSE 0 0 NA C coding 538 1614 457 2070 PB.9660.1 chr19 - 2260 12 full-splice_match SGTA ENST00000221566.6 2330 12 68 2 no_subtype FALSE canonical NA NA 71 None 5 8 0 FALSE 0 0 NA C coding 313 939 95 1033 PB.9660.2 chr19 - 1521 1 novel_in_catalog SGTA novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA C coding 115 345 1032 1376 PB.10510.1 chr21 - 528 4 novel_not_in_catalog ATP5J novel NA NA NA NA no_subtype FALSE non_canonical NA NA 52 None 2 0 0 FALSE 0 0 NA A coding 108 324 66 389 PB.9569.1 chr18 + 1491 3 novel_not_in_catalog ELAC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1136 None 5 11 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.5801.1 chr10 + 1799 4 full-splice_match NRBF2 ENST00000277746.10 1853 4 49 5 no_subtype FALSE canonical NA NA 288 None 9 4 0 FALSE 0 0 NA A coding 287 861 133 993 PB.4406.2 chr7 - 1885 5 full-splice_match TMED4 ENST00000457408.6 2322 5 16 421 no_subtype FALSE canonical NA NA 197 None 37 5 0 FALSE 0 0 NA A coding 227 681 38 718 PB.3803.24 chr6 - 1794 3 novel_in_catalog HLA-C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 228 None 2 21 0 FALSE 0 0 NA C coding 90 270 462 731 PB.3803.26 chr6 - 2097 11 novel_not_in_catalog HLA-B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 94 None 2 9 0 TRUE 0 0 NA C coding 241 723 630 1352 PB.3803.27 chr6 - 1451 9 fusion HLA-C,HLA-B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 94 None 81 12 1 TRUE 0 0 NA B coding 366 1098 22 1119 PB.3803.20 chr6 - 1509 8 fusion HLA-C,HLA-B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 99 None 13 24 1 TRUE 0 0 NA B coding 298 894 170 1063 PB.3803.21 chr6 - 1456 9 fusion HLA-C,HLA-B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 92 None 2 18 3 TRUE 0 0 NA B coding 123 369 20 388 PB.3803.22 chr6 - 2877 5 fusion HLA-C,HLA-B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 94 None 2 41 1 TRUE 0 0 NA B coding 116 348 22 369 PB.3803.23 chr6 - 2794 6 fusion HLA-C,HLA-B novel NA NA NA NA no_subtype FALSE canonical NA NA 92 None 3 27 0 TRUE 0 0 NA B coding 116 348 20 367 PB.10191.2 chr19 + 2608 4 full-splice_match ZNF211 ENST00000541801.5 2629 4 7 14 no_subtype FALSE canonical NA NA 546 None 2 6 0 FALSE 0 0 NA C coding 616 1848 174 2021 PB.10191.1 chr19 + 2649 5 full-splice_match ZNF211 ENST00000299871.9 2577 5 -47 -25 no_subtype FALSE canonical NA NA 590 None 2 6 0 FALSE 0 0 NA C coding 629 1887 179 2065 PB.3803.28 chr6 - 1448 9 fusion HLA-C,HLA-B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 92 None 2 18 0 TRUE 0 0 NA B coding 366 1098 20 1117 PB.3803.29 chr6 - 1439 8 full-splice_match HLA-C ENST00000376228.9 1536 8 4 93 no_subtype FALSE canonical NA NA 84 None 2 17 1 FALSE 0 0 NA C coding 366 1098 12 1109 PB.1128.2 chr1 - 6009 24 full-splice_match ARID4B ENST00000264183.7 6067 24 54 4 no_subtype FALSE canonical NA NA 395 None 3 8 0 FALSE 0 0 NA C coding 1312 3936 445 4380 PB.10826.1 chr22 - 1484 4 full-splice_match CDPF1 ENST00000314567.7 1875 4 387 4 no_subtype FALSE canonical NA NA 37 None 5 6 0 FALSE 0 0 NA C coding 123 369 38 406 PB.10530.2 chr21 - 1421 7 full-splice_match C21orf59 ENST00000290155.7 1692 7 256 15 no_subtype FALSE canonical NA NA 506 None 4 4 0 FALSE 0 0 NA A coding 290 870 368 1237 PB.10826.4 chr22 - 1760 4 novel_not_in_catalog CDPF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 315 None 2 7 0 FALSE 0 0 NA C coding 123 369 316 684 PB.5821.1 chr10 - 1285 11 full-splice_match PPA1 ENST00000373232.7 1295 11 0 10 no_subtype FALSE canonical NA NA 164 None 16 1 0 FALSE 0 0 NA A coding 289 867 101 967 PB.10345.1 chr20 - 1087 7 full-splice_match EIF6 ENST00000374450.7 1289 7 189 13 no_subtype TRUE canonical NA NA 71 None 5 2 0 FALSE 0 0 NA A coding 245 735 77 811 PB.7673.1 chr14 - 1504 1 incomplete-splice_match FBXO33 ENST00000298097.7 3853 4 2262 88 no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10388.1 chr20 + 1800 13 full-splice_match SGK2 ENST00000373092.7 1906 13 37 69 no_subtype FALSE canonical NA NA 1043 None 2 3 0 FALSE 0 0 NA A coding 367 1101 105 1205 PB.5673.1 chr10 + 3287 4 antisense novelGene_RP11-397O4.1_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 1719 None 2 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5253.1 chr9 + 3513 21 full-splice_match ACO1 ENST00000309951.7 7466 21 31 3922 no_subtype FALSE canonical NA NA 2663 None 7 6 0 FALSE 0 0 NA C coding 889 2667 108 2774 PB.5675.17 chr10 + 2042 1 genic_intron novelGene_85 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 23 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1432.8 chr2 + 2861 12 novel_not_in_catalog TTC31 novel NA NA NA NA no_subtype FALSE canonical NA NA 1550 None 5 6 0 TRUE 0 0 NA B coding 196 588 339 926 PB.10046.2 chr19 + 1413 11 novel_not_in_catalog CBLC novel NA NA NA NA no_subtype FALSE canonical NA NA 1330 None 2 0 0 TRUE 0 0 NA B coding 428 1284 37 1320 PB.10730.1 chr22 - 3306 14 novel_not_in_catalog MYH9 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 93 None 2 11 1 TRUE 0 0 NA C coding 592 1776 103 1878 PB.10801.1 chr22 - 1898 10 full-splice_match NAGA ENST00000402937.1 1869 10 2 -31 no_subtype FALSE canonical NA NA 78 None 56 2 0 FALSE 0 0 NA A coding 411 1233 155 1387 PB.541.1 chr1 - 6389 16 incomplete-splice_match SORT1 ENST00000256637.7 7028 20 630 9 5prime_fragment FALSE canonical NA NA 137 None 2 26 2 FALSE 0 0 NA B coding 612 1836 87 1922 PB.5326.1 chr9 - 3992 8 full-splice_match CARNMT1 ENST00000376834.7 4130 8 132 6 no_subtype FALSE canonical NA NA 251 None 2 13 0 FALSE 0 0 NA A coding 409 1227 22 1248 PB.7069.1 chr12 - 3140 2 genic RP11-557F20.2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1711 None 6 24 1 FALSE 0 0 NA A coding 103 309 410 718 PB.7349.2 chr12 + 1750 7 full-splice_match OGFOD2 ENST00000228922.11 1780 7 24 6 no_subtype FALSE canonical NA NA 797 None 10 9 0 FALSE 0 0 NA C coding 350 1050 9 1058 PB.21.1 chr1 - 1687 12 full-splice_match WRAP73 ENST00000270708.11 1665 12 -33 11 no_subtype FALSE canonical NA NA 176 None 3 5 0 FALSE 0 0 NA A coding 460 1380 108 1487 PB.5122.1 chr8 - 1604 1 full-splice_match SNORA25 ENST00000363205.1 127 1 -195 -1282 no_subtype FALSE canonical NA NA NA None 3 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6041.1 chr10 + 3018 3 genic TRUB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 317 None 3 26 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.5818.4 chr10 - 2922 7 novel_in_catalog AIFM2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 197 None 2 15 1 FALSE 0 0 NA C coding 333 999 20 1018 PB.201.1 chr1 + 1896 2 full-splice_match ATPIF1 ENST00000465645.1 1855 2 -36 -5 no_subtype FALSE canonical NA NA 153 None 3 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3327.1 chr5 - 2868 22 novel_not_in_catalog GFM2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 166 None 4 15 1 TRUE 0 0 NA B coding 779 2337 191 2527 PB.8028.3 chr15 + 2544 8 novel_in_catalog SNAP23 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 905 None 2 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3327.3 chr5 - 2886 22 novel_not_in_catalog GFM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 6 None 4 9 1 TRUE 0 0 NA B coding 779 2337 157 2493 PB.10538.1 chr21 - 4102 23 novel_not_in_catalog GART novel NA NA NA NA no_subtype FALSE non_canonical NA NA 61 None 3 8 1 TRUE 0 0 NA C coding 1010 3030 103 3132 PB.2852.1 chr4 - 1134 3 full-splice_match HOPX ENST00000555760.6 1139 3 0 5 no_subtype FALSE canonical NA NA 183 None 4 6 1 FALSE 0 0 NA C coding 2 6 342 347 PB.10538.3 chr21 - 3419 23 novel_not_in_catalog GART novel NA NA NA NA no_subtype FALSE canonical NA NA 47 None 2 4 0 FALSE 0 0 NA C coding 1010 3030 235 3264 PB.10538.2 chr21 - 3267 22 full-splice_match GART ENST00000381815.8 3341 22 33 41 no_subtype FALSE canonical NA NA 41 None 27 1 0 FALSE 0 0 NA C coding 1010 3030 83 3112 PB.2852.4 chr4 - 1176 3 novel_not_in_catalog HOPX novel NA NA NA NA no_subtype FALSE non_canonical NA NA 222 None 2 6 0 TRUE 0 0 NA C coding 9 27 465 491 PB.1375.1 chr2 + 3489 5 full-splice_match LGALSL ENST00000238875.9 3926 5 429 8 no_subtype FALSE canonical NA NA 400 None 2 17 0 FALSE 0 0 NA A coding 172 516 26 541 PB.9108.7 chr17 + 1476 1 incomplete-splice_match CASC3 ENST00000394114.2 2792 3 1311 6 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10861.1 chrX - 3555 10 full-splice_match MID1 ENST00000317552.8 6463 10 89 2819 no_subtype FALSE canonical NA NA 256 None 2 4 0 FALSE 0 0 NA A coding 667 2001 313 2313 PB.6733.4 chr11 - 3561 1 genic_intron novelGene_1109 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A coding 194 582 2305 2886 PB.6342.1 chr11 - 3901 1 full-splice_match MPEG1 ENST00000361050.3 4442 1 -28 569 no_subtype FALSE canonical NA NA NA None 19 13 0 FALSE 0 0 NA C coding 716 2148 115 2262 PB.8001.1 chr15 + 1847 3 full-splice_match RPUSD2 ENST00000315616.11 2358 3 24 487 no_subtype FALSE canonical NA NA 917 None 4 4 0 FALSE 0 0 NA A coding 511 1533 117 1649 PB.3359.2 chr5 + 1531 7 novel_in_catalog XRCC4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 905 None 5 2 0 FALSE 0 0 NA B coding 334 1002 13 1014 PB.7815.1 chr14 + 5810 13 incomplete-splice_match YLPM1 ENST00000325680.11 7108 21 -49 1347 3prime_fragment FALSE canonical NA NA 5738 None 2 3 0 FALSE 0 0 NA C coding 1879 5637 174 5810 PB.11029.1 chrX - 1527 8 novel_not_in_catalog RPS4X novel NA NA NA NA no_subtype FALSE canonical NA NA 26 None 2 6 0 FALSE 0 0 NA C coding 263 789 24 812 PB.467.1 chr1 - 1291 7 full-splice_match GTF2B ENST00000370500.9 1351 7 51 9 no_subtype FALSE canonical NA NA 85 None 23 1 0 FALSE 0 0 NA A coding 316 948 69 1016 PB.7531.4 chr13 - 3230 5 novel_not_in_catalog FBXL3 novel NA NA NA NA no_subtype FALSE canonical NA NA 59 None 3 15 1 FALSE 0 0 NA C coding 428 1284 61 1344 PB.441.2 chr1 + 2571 16 novel_not_in_catalog FAM73A novel NA NA NA NA no_subtype FALSE canonical NA NA 1646 None 5 5 1 FALSE 0 0 NA A coding 600 1800 63 1862 PB.832.1 chr1 + 2827 2 novel_not_in_catalog UCK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 135 None 42 14 0 TRUE 0 0 NA A coding 117 351 2349 2699 PB.5835.2 chr10 + 972 3 novel_in_catalog ANAPC16 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 150 None 2 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5835.3 chr10 + 1135 4 full-splice_match ANAPC16 ENST00000299381.4 3195 4 16 2044 no_subtype FALSE canonical NA NA 319 None 2 4 0 FALSE 0 0 NA C coding 110 330 103 432 PB.5835.4 chr10 + 1402 6 novel_not_in_catalog ANAPC16 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 578 None 5 7 0 TRUE 0 0 NA C coding 110 330 362 691 PB.3950.1 chr6 + 2808 16 full-splice_match CDC5L ENST00000371477.3 6423 16 205 3410 no_subtype FALSE canonical NA NA 2398 None 62 2 0 FALSE 0 0 NA A coding 802 2406 95 2500 PB.11029.2 chrX - 870 7 full-splice_match RPS4X ENST00000316084.9 1526 7 82 574 no_subtype FALSE canonical NA NA 26 None 19 0 0 FALSE 0 0 NA C coding 263 789 24 812 PB.6950.1 chr12 + 1788 9 full-splice_match PRPH ENST00000257860.8 3245 9 1445 12 no_subtype FALSE canonical NA NA 1401 None 2 1 0 FALSE 0 0 NA A coding 470 1410 55 1464 PB.9167.3 chr17 - 3328 21 novel_not_in_catalog SLC4A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 82 None 2 5 0 TRUE 0 0 NA B coding 911 2733 151 2883 PB.3594.2 chr5 - 1584 10 full-splice_match SPARC ENST00000231061.8 3701 10 250 1867 no_subtype FALSE canonical NA NA 51 None 422 1 0 FALSE 0 0 NA C coding 303 909 65 973 PB.2517.1 chr3 - 3205 9 full-splice_match PLSCR4 ENST00000354952.6 3303 9 97 1 no_subtype FALSE canonical NA NA 123 None 16 20 0 FALSE 0 0 NA C coding 329 987 145 1131 PB.4108.3 chr6 - 1490 1 incomplete-splice_match SERINC1 ENST00000339697.4 3137 10 1646 2 no_subtype FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4719.4 chr7 - 3440 7 genic RP5-894A10.2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 76 None 3 18 3 TRUE 0 0 NA B non_coding NA NA NA NA PB.1895.1 chr2 - 2647 23 incomplete-splice_match DOCK10 ENST00000409592.7 7288 56 49 4592 internal_fragment TRUE canonical NA NA 170 None 2 1 0 FALSE 0 0 NA B coding 860 2580 66 2645 PB.209.1 chr1 - 1895 4 genic TMEM200B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1752 None 8 11 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.4719.3 chr7 - 3268 4 genic RP5-894A10.2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 20 None 12 11 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.5318.1 chr9 + 3332 14 full-splice_match MAMDC2 ENST00000377182.4 3616 14 286 -2 no_subtype FALSE canonical NA NA 2327 None 21 3 0 FALSE 0 0 NA A coding 686 2058 332 2389 PB.4004.1 chr6 - 2732 1 antisense novelGene_SH3BGRL2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9549.1 chr18 - 1621 1 genic_intron novelGene_442 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1656.4 chr2 - 1166 1 incomplete-splice_match BAZ2B ENST00000483316.1 6838 4 2991 2682 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8441.1 chr16 - 3668 22 full-splice_match ZC3H7A ENST00000396516.6 3845 22 161 16 no_subtype FALSE canonical NA NA 105 None 5 3 0 FALSE 0 0 NA A coding 971 2913 38 2950 PB.3413.1 chr5 - 4638 6 full-splice_match STARD4 ENST00000505803.5 803 6 8 -3843 no_subtype FALSE canonical NA NA 164 None 4 33 0 FALSE 0 0 NA A coding 205 615 174 788 PB.4739.1 chr7 + 3656 5 full-splice_match GIMAP8 ENST00000307271.3 4184 5 465 63 no_subtype TRUE canonical NA NA 1418 None 123 9 0 FALSE 0 0 NA C coding 665 1995 110 2104 PB.4739.3 chr7 + 3572 4 novel_in_catalog GIMAP8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1338 None 6 4 0 FALSE 0 0 NA C coding 665 1995 30 2024 PB.1550.3 chr2 + 1545 4 novel_in_catalog SLC20A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 931 None 4 7 0 FALSE 0 0 NA C coding 217 651 457 1107 PB.6001.1 chr10 + 1890 6 novel_not_in_catalog BORCS7 novel NA NA NA NA no_subtype FALSE canonical NA NA 453 None 2 8 1 TRUE 0 0 NA A coding 105 315 19 333 PB.899.1 chr1 - 1288 9 novel_not_in_catalog ACBD6 novel NA NA NA NA no_subtype FALSE canonical NA NA 532 None 4 1 0 TRUE 0 0 NA A coding 282 846 311 1156 PB.7936.2 chr14 + 2742 8 novel_in_catalog TRAF3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 841 None 2 17 0 FALSE 0 0 NA C coding 300 900 116 1015 PB.11021.1 chrX + 1560 2 full-splice_match GJB1 ENST00000374022.3 1904 2 27 317 no_subtype FALSE canonical NA NA 52 None 7 0 0 FALSE 0 0 NA A coding 283 849 69 917 PB.2806.2 chr4 - 1831 9 novel_not_in_catalog TMEM156 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 165 None 2 11 2 TRUE 0 0 NA B coding 170 510 394 903 PB.1771.1 chr2 - 2887 2 genic_intron novelGene_1362 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2112 None 3 25 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5041.2 chr8 + 2760 3 novel_not_in_catalog POLR2K novel NA NA NA NA no_subtype FALSE non_canonical NA NA 917 None 2 24 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.7207.3 chr12 - 3131 1 antisense novelGene_CHST11_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA A coding 129 387 318 704 PB.5219.1 chr9 + 3022 15 novel_in_catalog UHRF2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2007 None 2 3 1 FALSE 0 0 NA B coding 579 1737 415 2151 PB.5219.2 chr9 + 5681 13 novel_in_catalog UHRF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4672 None 2 17 1 FALSE 0 0 NA B coding 189 567 311 877 PB.2974.1 chr4 - 5766 7 full-splice_match DNAJB14 ENST00000334223.6 2617 7 -7 -3142 no_subtype FALSE canonical NA NA 157 None 3 35 0 FALSE 0 0 NA C coding 312 936 54 989 PB.4281.12 chr7 - 1688 6 novel_not_in_catalog ACTB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 54 None 2 4 0 TRUE 0 0 NA C coding 332 996 100 1095 PB.8362.1 chr16 + 1180 11 full-splice_match GNPTG ENST00000204679.8 1983 11 33 770 no_subtype FALSE canonical NA NA 833 None 2 9 1 FALSE 0 0 NA A coding 305 915 11 925 PB.4281.10 chr7 - 2244 5 full-splice_match ACTB ENST00000462494.5 2245 5 0 1 no_subtype FALSE canonical NA NA 78 None 2 10 0 FALSE 0 0 NA C coding 253 759 892 1650 PB.4281.11 chr7 - 1681 7 novel_in_catalog ACTB novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 78 None 2 4 0 FALSE 0 0 NA C coding 375 1125 85 1209 PB.6503.1 chr11 + 3111 17 full-splice_match CTTN ENST00000346329.7 3272 17 150 11 no_subtype FALSE canonical NA NA 1563 None 99 16 1 FALSE 0 0 NA C coding 513 1539 159 1697 PB.6267.12 chr11 + 1726 1 incomplete-splice_match CAPRIN1 ENST00000341394.8 4108 19 2381 2 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8157.3 chr15 - 2956 19 novel_in_catalog DPP8 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 203 None 2 1 1 FALSE 0 0 NA C coding 831 2493 215 2707 PB.8113.1 chr15 + 3002 6 full-splice_match AQP9 ENST00000219919.8 3034 6 25 7 no_subtype FALSE canonical NA NA 1058 None 5 7 0 FALSE 0 0 NA A coding 295 885 346 1230 PB.3396.1 chr5 + 1684 1 genic CTD-2007H13.3 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6904.1 chr12 - 1813 11 incomplete-splice_match KIF21A ENST00000544797.6 5040 34 -83 3310 internal_fragment FALSE canonical NA NA 216 None 3 1 0 FALSE 0 0 NA A coding 547 1641 173 1813 PB.815.1 chr1 - 2505 5 novel_not_in_catalog SH2D1B novel NA NA NA NA no_subtype FALSE canonical NA NA 239 None 2 11 0 TRUE 0 0 NA A coding 132 396 106 501 PB.6374.2 chr11 - 6964 2 novel_not_in_catalog AHNAK novel NA NA NA NA no_subtype TRUE canonical NA NA 297 None 2 15 0 TRUE 0 0 NA C coding 2028 6084 39 6122 PB.10673.1 chr22 + 3424 6 novel_not_in_catalog SNRPD3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2164 None 4 27 2 TRUE 0 0 NA A coding 126 378 100 477 PB.5975.1 chr10 - 1373 5 novel_not_in_catalog MRPL43 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 202 None 3 9 2 TRUE 0 0 NA A coding 159 477 72 548 PB.9541.1 chr18 - 3549 11 novel_not_in_catalog SLC39A6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 264 None 2 5 1 TRUE 0 0 NA B coding 737 2211 274 2484 PB.9541.2 chr18 - 2903 11 novel_not_in_catalog SLC39A6 novel NA NA NA NA no_subtype FALSE canonical NA NA 269 None 32 4 2 TRUE 0 0 NA B coding 650 1950 559 2508 PB.9813.3 chr19 + 1739 9 full-splice_match CCDC130 ENST00000593174.5 1783 9 53 -9 no_subtype FALSE canonical NA NA 1040 None 2 12 0 FALSE 0 0 NA C coding 251 753 764 1516 PB.8833.1 chr17 + 5578 9 novel_in_catalog WDR81 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 4360 None 3 13 0 FALSE 0 0 NA A coding 802 2406 342 2747 PB.10357.7 chr20 + 1152 4 full-splice_match MYL9 ENST00000279022.6 2821 4 41 1628 no_subtype FALSE canonical NA NA 409 None 21 3 0 FALSE 0 0 NA A coding 172 516 64 579 PB.10357.4 chr20 + 2607 6 incomplete-splice_match DLGAP4 ENST00000475894.5 3110 7 498 5 internal_fragment FALSE canonical NA NA 787 None 18 19 0 FALSE 0 0 NA B coding 285 855 149 1003 PB.10357.5 chr20 + 5328 2 genic DLGAP4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5052 None 2 33 0 TRUE 0 0 NA B coding 172 516 3327 3842 PB.10357.2 chr20 + 3017 7 novel_in_catalog DLGAP4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1198 None 22 22 0 FALSE 0 0 NA B coding 285 855 560 1414 PB.8625.4 chr16 + 1570 8 novel_in_catalog HERPUD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 827 None 2 1 0 FALSE 0 0 NA C coding 297 891 99 989 PB.7669.1 chr14 - 1875 1 full-splice_match CLEC14A ENST00000342213.2 2267 1 283 109 no_subtype FALSE canonical NA NA NA None 3 4 0 FALSE 0 0 NA A coding 490 1470 65 1534 PB.10357.1 chr20 + 2427 6 incomplete-splice_match DLGAP4 ENST00000475894.5 3110 7 173 510 internal_fragment FALSE canonical NA NA 1112 None 9 15 0 FALSE 0 0 NA B coding 285 855 474 1328 PB.766.1 chr1 + 1774 7 novel_not_in_catalog CD1D novel NA NA NA NA no_subtype FALSE canonical NA NA 1132 None 5 10 1 TRUE 0 0 NA A coding 335 1005 33 1037 PB.3312.1 chr5 + 1587 10 novel_not_in_catalog BDP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1424 None 14 5 1 FALSE 0 0 NA B coding 457 1371 215 1585 PB.5524.1 chr9 - 1525 5 full-splice_match TOR2A ENST00000373284.9 1523 5 -8 6 no_subtype FALSE canonical NA NA 206 None 37 4 0 FALSE 0 0 NA A coding 321 963 56 1018 PB.3312.3 chr5 + 3161 17 incomplete-splice_match BDP1 ENST00000508917.6 7194 32 -12 4045 3prime_fragment FALSE canonical NA NA 2576 None 2 14 2 FALSE 0 0 NA B coding 985 2955 205 3159 PB.10708.6 chr22 + 2546 3 genic_intron novelGene_302 novel NA NA NA NA no_subtype FALSE canonical NA NA 2302 None 2 11 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.10708.7 chr22 - 2971 3 genic PATZ1 novel NA NA NA NA no_subtype FALSE canonical NA NA 206 None 19 11 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.10708.4 chr22 - 2937 8 novel_not_in_catalog PIK3IP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 116 None 11 15 0 TRUE 0 0 NA C coding 206 618 47 664 PB.10708.5 chr22 - 2423 6 full-splice_match PIK3IP1 ENST00000215912.9 2467 6 40 4 no_subtype FALSE canonical NA NA 214 None 4 11 0 FALSE 0 0 NA C coding 263 789 145 933 PB.10708.3 chr22 - 1642 3 genic_intron novelGene_300 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 266 None 2 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10708.1 chr22 - 5825 5 genic_intron novelGene_299 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1076 None 2 38 2 FALSE 0 0 NA A coding 111 333 1674 2006 PB.10284.2 chr20 - 1920 12 novel_in_catalog SNX5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 115 None 3 6 0 FALSE 0 0 NA C coding 367 1101 65 1165 PB.10284.1 chr20 - 1377 13 full-splice_match SNX5 ENST00000377759.8 2270 13 245 648 no_subtype FALSE canonical NA NA 101 None 34 1 0 FALSE 0 0 NA C coding 404 1212 51 1262 PB.3745.5 chr6 - 1655 1 full-splice_match RP1-257A7.5 ENST00000606393.1 473 1 6 -1188 no_subtype FALSE canonical NA NA NA None 7 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1432.2 chr2 + 3017 13 novel_not_in_catalog TTC31 novel NA NA NA NA no_subtype FALSE canonical NA NA 1707 None 6 6 0 TRUE 0 0 NA B coding 360 1080 4 1083 PB.9555.2 chr18 + 2985 2 genic_intron novelGene_456 novel NA NA NA NA no_subtype FALSE canonical NA NA 199 None 3 29 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9803.1 chr19 - 1410 6 full-splice_match DNASE2 ENST00000222219.7 1955 6 37 508 no_subtype FALSE canonical NA NA 142 None 7 3 0 FALSE 0 0 NA A coding 360 1080 57 1136 PB.6932.2 chr12 - 3085 10 novel_not_in_catalog VDR novel NA NA NA NA no_subtype FALSE non_canonical NA NA 61 None 2 18 0 TRUE 0 0 NA B coding 427 1281 150 1430 PB.6932.1 chr12 - 3449 10 novel_not_in_catalog VDR novel NA NA NA NA no_subtype FALSE canonical NA NA 85 None 3 13 1 TRUE 0 0 NA B coding 424 1272 97 1368 PB.2232.1 chr3 - 6223 4 novel_not_in_catalog TLR9 novel NA NA NA NA no_subtype FALSE canonical NA NA 54 None 3 21 1 TRUE 0 0 NA C coding 1032 3096 52 3147 PB.7760.3 chr14 + 3025 6 novel_not_in_catalog CHURC1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2435 None 4 14 1 TRUE 0 0 NA B coding 150 450 164 613 PB.7760.2 chr14 + 2932 3 genic CHURC1-FNTB novel NA NA NA NA no_subtype FALSE canonical NA NA 2094 None 5 16 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.7760.1 chr14 + 2726 6 novel_not_in_catalog CHURC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2194 None 152 13 1 TRUE 0 0 NA B coding 112 336 37 372 PB.7187.2 chr12 - 2608 7 novel_in_catalog UHRF1BP1L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 283 None 3 13 0 FALSE 0 0 NA B coding 293 879 240 1118 PB.5403.1 chr9 + 2463 2 novel_not_in_catalog TGFBR1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 221 None 3 24 1 TRUE 0 0 NA B coding 100 300 1953 2252 PB.7948.1 chr14 + 1337 8 novel_not_in_catalog ZFYVE21 novel NA NA NA NA no_subtype FALSE canonical NA NA 839 None 22 4 1 TRUE 0 0 NA A coding 234 702 9 710 PB.1782.2 chr2 + 2900 2 novel_not_in_catalog MARS2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2713 None 3 9 1 FALSE 0 0 NA C coding 593 1779 1 1779 PB.3081.1 chr4 + 2768 1 full-splice_match MAB21L2 ENST00000317605.5 2772 1 0 4 no_subtype FALSE canonical NA NA NA None 36 11 0 FALSE 0 0 NA A coding 359 1077 1109 2185 PB.2253.2 chr3 - 2847 1 incomplete-splice_match DCP1A ENST00000610213.5 5994 10 2024 1124 no_subtype FALSE canonical NA NA NA None 3 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2253.1 chr3 - 4787 10 full-splice_match DCP1A ENST00000610213.5 5994 10 74 1133 no_subtype TRUE canonical NA NA 154 None 15 6 0 FALSE 0 0 NA C coding 582 1746 20 1765 PB.8507.2 chr16 - 2716 3 genic_intron novelGene_228 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 150 None 3 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2476.1 chr3 + 2788 5 novel_in_catalog CDV3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 425 None 2 15 0 FALSE 0 0 NA B coding 155 465 109 573 PB.2253.4 chr3 - 2931 1 novel_in_catalog DCP1A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 17 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4566.2 chr7 + 1506 11 novel_not_in_catalog MUC12 novel NA NA NA NA no_subtype FALSE canonical NA NA 1167 None 6 5 1 TRUE 0 0 NA B coding 348 1044 163 1206 PB.7200.1 chr12 + 2707 18 full-splice_match HSP90B1 ENST00000299767.9 2858 18 145 6 no_subtype FALSE canonical NA NA 2419 None 391 6 1 FALSE 0 0 NA C coding 803 2409 38 2446 PB.7200.2 chr12 + 1021 7 incomplete-splice_match HSP90B1 ENST00000299767.9 2858 18 98 1739 3prime_fragment FALSE canonical NA NA 939 None 9 1 0 FALSE 0 0 NA C coding 312 936 85 1020 PB.7200.3 chr12 + 1690 12 incomplete-splice_match HSP90B1 ENST00000299767.9 2858 18 74 1094 3prime_fragment FALSE canonical NA NA 1482 None 4 1 0 FALSE 0 0 NA C coding 527 1581 109 1689 PB.1432.1 chr2 + 2892 14 novel_not_in_catalog TTC31 novel NA NA NA NA no_subtype FALSE canonical NA NA 1582 None 51 6 0 TRUE 0 0 NA B coding 519 1557 13 1569 PB.49.1 chr1 - 2757 8 full-splice_match LZIC ENST00000377213.1 945 8 24 -1836 no_subtype FALSE canonical NA NA 35 None 5 14 1 FALSE 0 0 NA A coding 190 570 203 772 PB.7560.1 chr13 - 3420 18 full-splice_match TMTC4 ENST00000376234.7 3483 18 48 15 no_subtype FALSE canonical NA NA 88 None 18 9 0 FALSE 0 0 NA C coding 741 2223 143 2365 PB.3853.4 chr6 - 5546 7 novel_not_in_catalog BAK1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 839 None 3 37 3 TRUE 0 0 NA C coding 138 414 2589 3002 PB.1910.6 chr2 + 2690 1 novel_in_catalog CAB39 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.189.4 chr1 - 2347 13 full-splice_match FGR ENST00000374005.7 2729 13 139 243 no_subtype FALSE canonical NA NA 74 None 14 12 1 FALSE 0 0 NA A coding 529 1587 151 1737 PB.3853.1 chr6 - 2041 6 full-splice_match BAK1 ENST00000374467.3 2136 6 90 5 no_subtype TRUE canonical NA NA 128 None 22 20 0 FALSE 0 0 NA C coding 211 633 160 792 PB.7681.1 chr14 + 2730 1 full-splice_match MGAT2 ENST00000305386.3 2687 1 33 -76 no_subtype FALSE canonical NA NA NA None 37 9 0 FALSE 0 0 NA A coding 447 1341 442 1782 PB.3077.1 chr4 + 1461 1 genic_intron novelGene_1232 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.556.2 chr1 + 1471 8 full-splice_match CD53 ENST00000271324.5 1505 8 25 9 no_subtype FALSE canonical NA NA 675 None 144 2 0 FALSE 0 0 NA C coding 219 657 88 744 PB.556.3 chr1 + 2038 8 novel_not_in_catalog CD53 novel NA NA NA NA no_subtype FALSE canonical NA NA 1243 None 3 6 0 FALSE 0 0 NA C coding 218 654 659 1312 PB.556.1 chr1 + 1551 9 novel_not_in_catalog CD53 novel NA NA NA NA no_subtype FALSE canonical NA NA 748 None 98 3 0 TRUE 0 0 NA C coding 219 657 161 817 PB.2939.1 chr4 - 3781 10 novel_not_in_catalog KLHL8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 191 None 10 16 1 TRUE 0 0 NA A coding 620 1860 344 2203 PB.556.4 chr1 + 3844 6 novel_in_catalog CD53 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3059 None 2 15 0 FALSE 0 0 NA C coding 100 300 121 420 PB.556.5 chr1 + 4166 6 novel_in_catalog CD53 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3374 None 2 17 0 FALSE 0 0 NA C coding 163 489 2955 3443 PB.11014.1 chrX + 1371 6 full-splice_match IGBP1 ENST00000342206.10 1862 6 486 5 no_subtype FALSE canonical NA NA 884 None 25 0 0 FALSE 0 0 NA A coding 339 1017 14 1030 PB.7055.5 chr12 - 2614 18 full-splice_match ARHGAP9 ENST00000393791.7 2597 18 -34 17 no_subtype FALSE canonical NA NA 155 None 4 2 0 FALSE 0 0 NA C coding 731 2193 174 2366 PB.3590.2 chr5 + 1887 6 novel_not_in_catalog GM2A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1659 None 2 10 1 TRUE 0 0 NA B coding 190 570 32 601 PB.7055.3 chr12 - 1989 16 full-splice_match ARHGAP9 ENST00000430041.6 2323 16 332 2 no_subtype FALSE canonical NA NA 82 None 16 3 0 FALSE 0 0 NA C coding 547 1641 101 1741 PB.4224.1 chr6 - 2921 1 antisense novelGene_TULP4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 11 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4166.1 chr6 + 1356 6 full-splice_match AIG1 ENST00000357847.8 1395 6 33 6 no_subtype FALSE canonical NA NA 696 None 6 3 0 FALSE 0 0 NA A coding 238 714 18 731 PB.7136.8 chr12 - 1991 15 full-splice_match PPP1R12A ENST00000547330.5 2275 15 184 100 no_subtype FALSE canonical NA NA 252 None 19 0 0 FALSE 0 0 NA C coding 658 1974 16 1989 PB.7136.9 chr12 - 2008 15 incomplete-splice_match PPP1R12A ENST00000550107.5 2925 24 -15 932 internal_fragment FALSE canonical NA NA 252 None 4 0 0 FALSE 0 0 NA C coding 664 1992 16 2007 PB.5519.1 chr9 + 1908 11 novel_not_in_catalog SLC2A8 novel NA NA NA NA no_subtype TRUE canonical NA NA 1361 None 3 3 0 TRUE 0 0 NA A coding 477 1431 63 1493 PB.4507.2 chr7 + 1686 1 novel_in_catalog RBM48 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7136.4 chr12 - 3288 25 full-splice_match PPP1R12A ENST00000450142.6 5721 25 63 2370 no_subtype FALSE canonical NA NA 441 None 4 25 2 FALSE 0 0 NA C coding 1026 3078 211 3288 PB.7136.5 chr12 - 3112 24 novel_in_catalog PPP1R12A novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 441 None 3 3 0 FALSE 0 0 NA C coding 967 2901 211 3111 PB.7136.6 chr12 - 1602 1 novel_in_catalog PPP1R12A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7136.7 chr12 - 3127 14 novel_in_catalog PPP1R12A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 441 None 6 10 0 FALSE 0 0 NA C coding 550 1650 211 1860 PB.793.1 chr1 - 1443 1 incomplete-splice_match CD84 ENST00000534968.5 7885 6 6437 6 no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9295.4 chr17 - 3239 20 novel_in_catalog FTSJ3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 45 None 2 21 0 FALSE 0 0 NA C coding 782 2346 529 2874 PB.7435.1 chr13 - 2724 1 incomplete-splice_match DCLK1 ENST00000460982.1 5247 3 2524 0 no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9567.1 chr18 - 2310 15 full-splice_match CXXC1 ENST00000285106.10 2936 15 617 9 no_subtype FALSE canonical NA NA 101 None 2 0 0 FALSE 0 0 NA C coding 656 1968 99 2066 PB.9567.2 chr18 - 2887 12 novel_in_catalog CXXC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 118 None 2 1 0 FALSE 0 0 NA C coding 350 1050 1601 2650 PB.9295.3 chr17 - 3043 21 novel_not_in_catalog FTSJ3 novel NA NA NA NA no_subtype TRUE canonical NA NA 59 None 7 16 1 TRUE 0 0 NA C coding 847 2541 138 2678 PB.8556.3 chr16 - 1547 10 novel_in_catalog SEPT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 58 None 31 9 1 FALSE 0 0 NA B coding 192 576 675 1250 PB.8556.1 chr16 - 1429 11 incomplete-splice_match SEPT1 ENST00000321367.7 1592 12 156 7 5prime_fragment FALSE canonical NA NA 34 None 139 4 0 FALSE 0 0 NA B coding 372 1116 17 1132 PB.8556.6 chr16 - 1051 6 novel_in_catalog SEPT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 36 None 2 1 0 FALSE 0 0 NA B coding 172 516 19 534 PB.8556.5 chr16 - 1386 11 novel_not_in_catalog SEPT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 27 None 2 9 1 TRUE 0 0 NA B coding 192 576 536 1111 PB.8556.4 chr16 - 1348 11 novel_not_in_catalog SEPT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 33 None 2 10 3 TRUE 0 0 NA B coding 241 723 479 1201 PB.8588.1 chr16 - 2613 17 full-splice_match VPS35 ENST00000299138.11 6790 17 25 4152 no_subtype FALSE canonical NA NA 37 None 123 0 0 FALSE 0 0 NA C coding 796 2388 35 2422 PB.8455.2 chr16 - 1754 3 genic_intron novelGene_124 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 248 None 2 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8588.4 chr16 - 3113 16 novel_in_catalog VPS35 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical NA NA 58 None 3 12 0 FALSE 0 0 NA C coding 755 2265 56 2320 PB.2243.4 chr3 + 1746 13 incomplete-splice_match GNL3 ENST00000418458.5 2040 15 290 4 internal_fragment FALSE canonical NA NA 1450 None 6 3 0 FALSE 0 0 NA C coding 444 1332 199 1530 PB.2243.5 chr3 + 3017 13 novel_in_catalog GNL3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2718 None 4 10 0 FALSE 0 0 NA C coding 258 774 2025 2798 PB.8923.1 chr17 - 2894 22 incomplete-splice_match MYH10 ENST00000269243.8 7662 41 37 4731 internal_fragment FALSE canonical NA NA 71 None 8 1 0 FALSE 0 0 NA A coding 930 2790 103 2892 PB.7228.1 chr12 - 2642 2 full-splice_match TMEM119 ENST00000392806.3 2707 2 52 13 no_subtype FALSE canonical NA NA 103 None 2 15 0 FALSE 0 0 NA A coding 283 849 118 966 PB.3974.2 chr6 + 3526 16 novel_not_in_catalog ZNF451 novel NA NA NA NA no_subtype FALSE canonical NA NA 3198 None 25 8 1 TRUE 0 0 NA A coding 1061 3183 60 3242 PB.2243.1 chr3 + 1480 13 incomplete-splice_match GNL3 ENST00000418458.5 2040 15 114 446 3prime_fragment FALSE canonical NA NA 1383 None 3 1 0 FALSE 0 0 NA C coding 473 1419 60 1478 PB.2243.2 chr3 + 1925 15 full-splice_match GNL3 ENST00000418458.5 2040 15 114 1 no_subtype FALSE canonical NA NA 1626 None 10 3 0 FALSE 0 0 NA C coding 549 1647 60 1706 PB.2243.3 chr3 + 2915 12 novel_in_catalog GNL3 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2619 None 2 8 0 FALSE 0 0 NA C coding 216 648 2052 2699 PB.3469.1 chr5 - 1361 1 incomplete-splice_match KIF3A ENST00000378746.8 6325 17 4959 6 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6469.1 chr11 + 1430 8 full-splice_match RCE1 ENST00000309657.7 1485 8 31 24 no_subtype FALSE canonical NA NA 767 None 4 2 0 FALSE 0 0 NA A coding 329 987 14 1000 PB.8927.1 chr17 - 1588 5 novel_in_catalog PIK3R5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 103 None 8 6 0 FALSE 0 0 NA B coding 140 420 117 536 PB.1432.6 chr2 + 2891 12 novel_not_in_catalog TTC31 novel NA NA NA NA no_subtype FALSE canonical NA NA 1581 None 3 7 1 TRUE 0 0 NA B coding 312 936 22 957 PB.392.1 chr1 - 2744 1 novel_in_catalog USP24 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.847.2 chr1 + 3194 19 full-splice_match DCAF6 ENST00000312263.10 3186 19 -3 -5 no_subtype FALSE canonical NA NA 2725 None 39 2 0 FALSE 0 0 NA C coding 860 2580 208 2787 PB.195.1 chr1 + 2029 3 full-splice_match XKR8 ENST00000373884.5 2692 3 661 2 no_subtype FALSE canonical NA NA 437 None 11 3 0 FALSE 0 0 NA A coding 264 792 341 1132 PB.5511.2 chr9 + 2771 9 full-splice_match PBX3 ENST00000373489.9 2775 9 -6 10 no_subtype FALSE canonical NA NA 1234 None 5 7 0 FALSE 0 0 NA C coding 434 1302 23 1324 PB.5047.1 chr8 + 1261 1 antisense novelGene_YWHAZ_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.195.2 chr1 + 1247 1 antisense novelGene_EYA3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.910.6 chr1 + 2928 5 novel_in_catalog SMG7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 560 None 2 11 0 FALSE 0 0 NA C coding 213 639 33 671 PB.9911.1 chr19 + 5933 4 novel_not_in_catalog AC007795.1 novel NA NA NA NA no_subtype FALSE canonical NA NA 4286 None 2 38 2 TRUE 0 0 NA A non_coding NA NA NA NA PB.5063.1 chr8 - 3103 7 novel_not_in_catalog RSPO2 novel NA NA NA NA no_subtype TRUE canonical NA NA 452 None 13 11 0 TRUE 0 0 NA A coding 243 729 622 1350 PB.1974.1 chr3 - 2130 10 novel_not_in_catalog SUMF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 287 None 5 6 0 TRUE 0 0 NA B coding 374 1122 18 1139 PB.560.1 chr1 - 3286 5 novel_not_in_catalog LRIF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 301 None 4 12 1 TRUE 0 0 NA A coding 506 1518 234 1751 PB.8228.2 chr15 - 2654 20 incomplete-splice_match SCAPER ENST00000324767.11 4707 31 -1 2054 internal_fragment FALSE canonical NA NA 66 None 4 1 1 FALSE 0 0 NA B coding 863 2589 64 2652 PB.4974.1 chr8 - 3114 2 novel_not_in_catalog UBE2W novel NA NA NA NA no_subtype FALSE canonical NA NA 2543 None 5 24 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.2375.6 chr3 - 1763 2 incomplete-splice_match CCDC80 ENST00000439685.6 3557 8 260 1534 internal_fragment FALSE canonical NA NA 117 None 3 1 0 FALSE 0 0 NA C coding 535 1605 159 1763 PB.3993.1 chr6 - 2607 11 full-splice_match SLC17A5 ENST00000355773.5 3455 11 186 662 no_subtype FALSE canonical NA NA 177 None 23 5 0 FALSE 0 0 NA A coding 495 1485 84 1568 PB.1432.5 chr2 + 2968 13 novel_not_in_catalog TTC31 novel NA NA NA NA no_subtype FALSE canonical NA NA 1659 None 6 6 0 TRUE 0 0 NA B coding 340 1020 16 1035 PB.1096.3 chr1 + 1690 4 novel_in_catalog ARF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 423 None 15 2 0 FALSE 0 0 NA C coding 181 543 40 582 PB.8807.1 chr16 - 2338 15 novel_not_in_catalog GALNS novel NA NA NA NA no_subtype FALSE canonical NA NA 193 None 3 6 0 TRUE 0 0 NA A coding 522 1566 74 1639 PB.9671.1 chr19 + 3585 14 full-splice_match FZR1 ENST00000441788.6 5212 14 57 1570 no_subtype FALSE canonical NA NA 1619 None 15 17 0 FALSE 0 0 NA A coding 493 1479 180 1658 PB.10031.5 chr19 - 3368 8 novel_not_in_catalog CEACAM1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 125 None 10 14 2 FALSE 0 0 NA C coding 465 1395 62 1456 PB.1481.8 chr2 - 7476 48 novel_not_in_catalog SNRNP200 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 107 None 2 14 3 TRUE 0 0 NA B coding 1946 5838 1363 7200 PB.3929.1 chr6 + 2931 17 novel_not_in_catalog PPP2R5D novel NA NA NA NA no_subtype FALSE canonical NA NA 1741 None 123 4 0 TRUE 0 0 NA C coding 602 1806 71 1876 PB.4024.1 chr6 + 1740 9 novel_not_in_catalog SLC35A1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1611 None 13 11 1 TRUE 0 0 NA A coding 337 1011 8 1018 PB.6347.1 chr11 - 5707 2 antisense novelGene_STX3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 3071 None 2 45 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.380.1 chr1 - 1115 8 full-splice_match TMEM59 ENST00000234831.9 6691 8 237 5339 no_subtype FALSE canonical NA NA 202 None 138 0 0 FALSE 0 0 NA A coding 323 969 14 982 PB.4058.9 chr6 - 3603 2 full-splice_match SCML4 ENST00000476798.1 2679 2 -47 -877 no_subtype FALSE canonical NA NA 177 None 2 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5369.1 chr9 - 3114 10 novel_in_catalog ECM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 62 None 3 10 1 FALSE 0 0 NA A coding 677 2031 90 2120 PB.4058.4 chr6 - 2020 11 novel_not_in_catalog SCML4 novel NA NA NA NA no_subtype FALSE canonical NA NA 195 None 5 2 0 TRUE 0 0 NA C coding 392 1176 321 1496 PB.4058.5 chr6 - 2550 9 novel_not_in_catalog SCML4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 183 None 2 10 1 FALSE 0 0 NA C coding 440 1320 243 1562 PB.6461.1 chr11 - 818 5 full-splice_match MRPL11 ENST00000310999.11 1605 5 22 765 no_subtype FALSE canonical NA NA 195 None 2 2 0 FALSE 0 0 NA A coding 192 576 73 648 PB.4058.1 chr6 - 2815 2 genic SCML4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2558 None 2 17 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.4566.3 chr7 - 1469 1 antisense novelGene_MUC12_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4058.3 chr6 - 3276 2 genic RP1-47M23.3 novel NA NA NA NA no_subtype FALSE canonical NA NA 787 None 11 17 1 FALSE 0 0 NA B coding 125 375 436 810 PB.1432.4 chr2 + 2811 13 novel_not_in_catalog TTC31 novel NA NA NA NA no_subtype FALSE canonical NA NA 1500 None 3 15 1 TRUE 0 0 NA B coding 352 1056 22 1077 PB.4125.2 chr6 + 3142 8 full-splice_match AKAP7 ENST00000431975.6 2954 8 -192 4 no_subtype FALSE canonical NA NA 1140 None 2 30 2 FALSE 0 0 NA A coding 438 1314 21 1334 PB.6812.4 chr12 - 2789 9 novel_not_in_catalog M6PR novel NA NA NA NA no_subtype FALSE non_canonical NA NA 158 None 3 15 3 TRUE 0 0 NA C coding 277 831 512 1342 PB.7082.1 chr12 + 1662 1 genic_intron novelGene_610 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6230.2 chr11 - 1596 1 incomplete-splice_match TPH1 ENST00000250018.6 5325 10 2095 1635 no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9919.1 chr19 - 3504 16 novel_not_in_catalog RHPN2 novel NA NA NA NA no_subtype TRUE canonical NA NA 105 None 2 10 0 TRUE 0 0 NA A coding 686 2058 37 2094 PB.6230.1 chr11 - 3329 11 novel_not_in_catalog TPH1 novel NA NA NA NA no_subtype FALSE canonical NA NA 176 None 7 14 0 FALSE 0 0 NA B coding 444 1332 203 1534 PB.8978.7 chr17 + 3507 13 novel_not_in_catalog ALDH3A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2458 None 20 12 0 TRUE 0 0 NA B coding 485 1455 44 1498 PB.8978.6 chr17 + 1674 13 novel_not_in_catalog ALDH3A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1490 None 2 1 1 TRUE 0 0 NA B coding 485 1455 44 1498 PB.8978.5 chr17 + 3536 14 novel_not_in_catalog ALDH3A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2482 None 2 14 1 TRUE 0 0 NA B coding 485 1455 68 1522 PB.8978.4 chr17 + 3638 15 novel_not_in_catalog ALDH3A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2591 None 5 13 1 TRUE 0 0 NA B coding 508 1524 52 1575 PB.8978.3 chr17 + 3688 15 novel_not_in_catalog ALDH3A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2635 None 2 14 1 TRUE 0 0 NA B coding 508 1524 96 1619 PB.9134.1 chr17 + 3432 19 full-splice_match STAT5A ENST00000590949.5 3318 19 641 -755 no_subtype FALSE canonical NA NA 2323 None 80 8 0 FALSE 0 0 NA C coding 794 2382 102 2483 PB.8978.1 chr17 + 3533 14 novel_not_in_catalog ALDH3A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2480 None 57 13 1 TRUE 0 0 NA B coding 485 1455 66 1520 PB.9134.3 chr17 + 3664 18 novel_in_catalog STAT5A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2234 None 2 11 0 FALSE 0 0 NA C coding 794 2382 13 2394 PB.4558.1 chr7 + 1495 10 full-splice_match GNB2 ENST00000303210.8 1878 10 374 9 no_subtype FALSE canonical NA NA 1024 None 56 1 0 FALSE 0 0 NA A coding 340 1020 109 1128 PB.651.2 chr1 - 2004 6 full-splice_match APH1A ENST00000360244.8 2353 6 346 3 no_subtype FALSE canonical NA NA 260 None 3 6 0 FALSE 0 0 NA C coding 247 741 148 888 PB.9147.1 chr17 + 3878 4 full-splice_match AOC3 ENST00000308423.6 4026 4 144 4 no_subtype FALSE canonical NA NA 2032 None 75 8 0 FALSE 0 0 NA C coding 763 2289 17 2305 PB.8196.1 chr15 - 2534 8 novel_not_in_catalog ADPGK novel NA NA NA NA no_subtype TRUE canonical NA NA 302 None 9 4 0 FALSE 0 0 NA C coding 497 1491 70 1560 PB.396.1 chr1 - 1879 10 novel_not_in_catalog OMA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 37 None 2 4 1 FALSE 0 0 NA A coding 524 1572 63 1634 PB.11220.1 chrX - 1938 12 full-splice_match MPP1 ENST00000369534.7 2042 12 99 5 no_subtype FALSE canonical NA NA 151 None 16 4 0 FALSE 0 0 NA A coding 466 1398 50 1447 PB.5416.1 chr9 - 5820 20 incomplete-splice_match ABCA1 ENST00000374736.7 10494 50 4669 5 5prime_fragment FALSE canonical NA NA 190 None 2 26 0 FALSE 0 0 NA B coding 816 2448 62 2509 PB.2642.4 chr3 + 3086 17 novel_not_in_catalog SENP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1772 None 2 15 2 TRUE 0 0 NA C coding 509 1527 306 1832 PB.6155.1 chr11 - 1877 8 novel_not_in_catalog TRIM21 novel NA NA NA NA no_subtype FALSE canonical NA NA 36 None 19 4 1 TRUE 0 0 NA A coding 475 1425 86 1510 PB.4815.1 chr8 + 2836 14 full-splice_match ATP6V1B2 ENST00000276390.6 2875 14 18 21 no_subtype FALSE canonical NA NA 1418 None 208 11 0 FALSE 0 0 NA C coding 511 1533 23 1555 PB.4815.2 chr8 + 2697 13 novel_in_catalog ATP6V1B2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1271 None 2 20 0 FALSE 0 0 NA C coding 317 951 27 977 PB.388.1 chr1 + 3067 17 novel_not_in_catalog ACOT11 novel NA NA NA NA no_subtype FALSE canonical NA NA 1703 None 7 5 0 TRUE 0 0 NA B coding 560 1680 177 1856 PB.9681.2 chr19 - 1570 8 novel_not_in_catalog SIRT6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 90 None 3 7 1 TRUE 0 0 NA C coding 245 735 25 759 PB.9681.1 chr19 - 1584 8 full-splice_match SIRT6 ENST00000337491.6 1641 8 41 16 no_subtype TRUE canonical NA NA 90 None 22 3 0 FALSE 0 0 NA C coding 355 1065 25 1089 PB.388.2 chr1 + 2969 16 novel_not_in_catalog ACOT11 novel NA NA NA NA no_subtype FALSE canonical NA NA 1599 None 5 3 0 TRUE 0 0 NA B coding 560 1680 73 1752 PB.5130.3 chr8 + 1886 13 novel_in_catalog PHF20L1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1873 None 2 2 1 FALSE 0 0 NA B coding 531 1593 292 1884 PB.8092.2 chr15 - 1111 4 full-splice_match ARPP19 ENST00000566423.5 5362 4 107 4144 no_subtype FALSE canonical NA NA 17 None 6 2 0 FALSE 0 0 NA A coding 112 336 28 363 PB.1740.1 chr2 + 2951 28 novel_not_in_catalog COL3A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2535 None 2 3 1 TRUE 0 0 NA C coding 853 2559 121 2679 PB.9420.2 chr17 - 3004 12 full-splice_match TBC1D16 ENST00000310924.6 10936 12 -21 7953 no_subtype FALSE canonical NA NA 75 None 55 1 0 FALSE 0 0 NA C coding 767 2301 138 2438 PB.9420.3 chr17 - 3820 6 novel_not_in_catalog TBC1D16 novel NA NA NA NA no_subtype FALSE canonical NA NA 78 None 3 21 2 TRUE 0 0 NA C coding 260 780 141 920 PB.3769.1 chr6 - 2994 1 genic_intron novelGene_168 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A coding 102 306 184 489 PB.3983.1 chr6 - 2052 17 novel_not_in_catalog LMBRD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 93 None 2 3 1 TRUE 0 0 NA C coding 540 1620 25 1644 PB.3983.2 chr6 - 1937 16 full-splice_match LMBRD1 ENST00000370577.7 2209 16 206 66 no_subtype FALSE canonical NA NA 93 None 9 2 0 FALSE 0 0 NA C coding 540 1620 25 1644 PB.8132.4 chr15 + 3208 1 incomplete-splice_match APH1B ENST00000261879.9 4189 6 977 5 no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1051.1 chr1 - 1646 1 genic_intron novelGene_1399 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11024.2 chrX + 6392 39 novel_in_catalog TAF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5516 None 2 15 1 FALSE 0 0 NA C coding 1907 5721 16 5736 PB.6706.2 chr11 + 6447 1 genic_intron novelGene_1063 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 35 0 FALSE 0 0 NA A coding 128 384 3913 4296 PB.8138.6 chr15 - 5730 30 novel_in_catalog HERC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 104 None 2 3 0 FALSE 0 0 NA B coding 1866 5598 131 5728 PB.6149.1 chr11 - 6702 33 full-splice_match NUP98 ENST00000324932.11 6973 33 250 21 no_subtype FALSE canonical NA NA 143 None 4 13 0 FALSE 0 0 NA C coding 1800 5400 172 5571 PB.8970.2 chr17 + 1825 11 novel_in_catalog PRPSAP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1082 None 6 1 0 FALSE 0 0 NA C coding 357 1071 168 1238 PB.8970.1 chr17 + 1903 12 full-splice_match PRPSAP2 ENST00000268835.6 1910 12 2 5 no_subtype FALSE canonical NA NA 1232 None 3 1 0 FALSE 0 0 NA C coding 357 1071 318 1388 PB.6149.2 chr11 - 3639 20 full-splice_match NUP98 ENST00000397004.8 3923 20 -1 285 no_subtype FALSE canonical NA NA 143 None 6 7 0 FALSE 0 0 NA C coding 920 2760 172 2931 PB.1648.2 chr2 - 1793 14 full-splice_match STAM2 ENST00000263904.4 5701 14 273 3635 no_subtype FALSE canonical NA NA 117 None 4 0 0 FALSE 0 0 NA C coding 525 1575 78 1652 PB.9104.1 chr17 + 1613 1 genic_intron novelGene_398 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7477.2 chr13 - 1549 4 genic ESD novel NA NA NA NA no_subtype TRUE canonical NA NA 131 None 2 13 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.3211.1 chr5 - 4343 35 full-splice_match NUP155 ENST00000231498.7 8143 35 94 3706 no_subtype FALSE canonical NA NA 267 None 7 0 0 FALSE 0 0 NA A coding 1382 4146 138 4283 PB.8950.1 chr17 + 2189 2 full-splice_match MED9 ENST00000268711.3 2228 2 20 19 no_subtype FALSE canonical NA NA 260 None 2 11 0 FALSE 0 0 NA A coding 146 438 37 474 PB.1815.1 chr2 + 2834 1 novel_in_catalog NRP2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2471.7 chr3 - 1686 15 novel_not_in_catalog MRPL3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 272 None 5 10 4 TRUE 0 0 NA B coding 348 1044 181 1224 PB.2117.3 chr3 + 3785 3 novel_not_in_catalog TRAK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 953 None 19 11 1 FALSE 0 0 NA B coding 292 876 871 1746 PB.4517.2 chr7 + 4248 52 full-splice_match COL1A2 ENST00000297268.10 5411 52 358 805 no_subtype FALSE canonical NA NA 4067 None 23 2 0 FALSE 0 0 NA C coding 270 810 1345 2154 PB.4517.1 chr7 + 4575 53 novel_not_in_catalog COL1A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 4162 None 35 3 0 TRUE 0 0 NA C coding 270 810 1440 2249 PB.6582.1 chr11 - 1480 1 novel_in_catalog CTSC novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7742.1 chr14 + 1829 5 incomplete-splice_match PPM1A ENST00000325642.7 1713 6 498 -614 internal_fragment FALSE canonical NA NA 936 None 2 2 0 FALSE 0 0 NA A coding 271 813 151 963 PB.1843.1 chr2 - 2592 11 full-splice_match BARD1 ENST00000260947.8 5499 11 -6 2913 no_subtype TRUE canonical NA NA 299 None 8 5 0 FALSE 0 0 NA A coding 777 2331 142 2472 PB.910.3 chr1 + 5706 22 novel_in_catalog SMG7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3338 None 2 19 1 FALSE 0 0 NA C coding 756 2268 1182 3449 PB.2124.1 chr3 + 2848 1 novel_in_catalog NKTR novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10788.2 chr22 + 3501 20 incomplete-splice_match EP300 ENST00000263253.8 9587 31 1412 4674 internal_fragment FALSE canonical NA NA 3478 None 2 0 0 FALSE 0 0 NA B coding 1162 3486 15 3500 PB.3599.3 chr5 + 2802 1 incomplete-splice_match GALNT10 ENST00000297107.10 5961 12 3153 7 no_subtype FALSE canonical NA NA NA None 4 14 0 FALSE 0 0 NA C coding 152 456 1017 1472 PB.7972.1 chr15 + 3578 1 novel_in_catalog FAN1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A coding 203 609 90 698 PB.2354.1 chr3 + 2965 1 antisense novelGene_CBLB_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6403.3 chr11 + 2567 15 novel_not_in_catalog FERMT3 novel NA NA NA NA no_subtype TRUE canonical NA NA 1997 None 3 9 0 FALSE 0 0 NA C coding 427 1281 894 2174 PB.6403.1 chr11 + 2493 15 full-splice_match FERMT3 ENST00000345728.9 2481 15 -8 -4 no_subtype FALSE canonical NA NA 1915 None 65 4 0 FALSE 0 0 NA C coding 663 1989 104 2092 PB.7441.3 chr13 + 3600 2 novel_in_catalog UFM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 63 None 3 25 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.187.1 chr1 - 2839 9 full-splice_match WASF2 ENST00000618852.4 5676 9 -5 2842 no_subtype FALSE canonical NA NA 178 None 74 8 0 FALSE 0 0 NA C coding 498 1494 222 1715 PB.7441.1 chr13 + 1797 7 novel_not_in_catalog UFM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 424 None 12 8 1 TRUE 0 0 NA B coding 85 255 62 316 PB.9244.1 chr17 - 1504 5 novel_not_in_catalog COX11 novel NA NA NA NA no_subtype FALSE canonical NA NA 406 None 11 10 1 TRUE 0 0 NA A coding 276 828 41 868 PB.187.9 chr1 - 5610 9 novel_not_in_catalog WASF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 181 None 7 30 1 TRUE 0 0 NA C coding 461 1383 225 1607 PB.6761.1 chr12 + 3923 2 genic_intron novelGene_19 novel NA NA NA NA no_subtype FALSE canonical NA NA 2621 None 2 29 1 FALSE 0 0 NA A coding 123 369 878 1246 PB.7207.4 chr12 + 5578 1 genic_intron novelGene_947 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA B coding 135 405 4911 5315 PB.6536.3 chr11 + 2873 5 novel_in_catalog RPS3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2800 None 2 19 1 FALSE 0 0 NA C coding 117 351 29 379 PB.6536.2 chr11 + 821 7 full-splice_match RPS3 ENST00000531188.5 2097 7 38 1238 no_subtype FALSE canonical NA NA 759 None 13 1 0 FALSE 0 0 NA C coding 243 729 25 753 PB.6536.1 chr11 + 3040 6 novel_not_in_catalog RPS3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2967 None 2 24 1 TRUE 0 0 NA C coding 117 351 2611 2961 PB.2626.3 chr3 + 2437 21 full-splice_match ABCF3 ENST00000429586.6 2624 21 179 8 no_subtype FALSE canonical NA NA 1977 None 15 3 0 FALSE 0 0 NA C coding 709 2127 7 2133 PB.2334.2 chr3 + 3623 18 full-splice_match TBC1D23 ENST00000344949.9 3656 18 14 19 no_subtype FALSE canonical NA NA 1977 None 5 8 0 FALSE 0 0 NA C coding 684 2052 5 2056 PB.2334.1 chr3 + 3683 19 full-splice_match TBC1D23 ENST00000394144.8 3677 19 -12 6 no_subtype FALSE canonical NA NA 2037 None 8 8 0 FALSE 0 0 NA C coding 699 2097 20 2116 PB.7376.1 chr12 - 2964 19 novel_not_in_catalog CHFR novel NA NA NA NA no_subtype TRUE non_canonical NA NA 29 None 3 16 2 TRUE 0 0 NA B coding 286 858 964 1821 PB.7959.226 chr14 - 1531 14 fusion IGHV3-62,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 74 None 2 20 8 TRUE 0 0 NA B coding 196 588 812 1399 PB.6620.1 chr11 + 1078 6 full-splice_match AASDHPPT ENST00000278618.8 2955 6 200 1677 no_subtype FALSE canonical NA NA 787 None 91 1 0 FALSE 0 0 NA A coding 309 927 23 949 PB.129.1 chr1 - 2922 2 genic_intron novelGene_217 novel NA NA NA NA no_subtype FALSE canonical NA NA 1939 None 4 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.883.1 chr1 + 3542 3 antisense novelGene_RFWD2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2687 None 3 23 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.10646.10 chr22 + 2980 15 novel_not_in_catalog MED15 novel NA NA NA NA no_subtype FALSE canonical NA NA 1930 None 3 13 1 FALSE 0 0 NA C coding 665 1995 70 2064 PB.10646.12 chr22 + 2400 1 novel_in_catalog MED15 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C coding 101 303 936 1238 PB.10256.1 chr20 - 1133 6 full-splice_match PCNA ENST00000379143.9 1344 6 68 143 no_subtype FALSE canonical NA NA 381 None 2 0 0 FALSE 0 0 NA A coding 261 783 161 943 PB.10164.8 chr19 - 2028 14 fusion LILRA6,LILRB3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 114 None 5 7 3 TRUE 0 0 NA B coding 346 1038 81 1118 PB.5999.3 chr10 + 2837 2 genic_intron novelGene_935 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 157 None 6 17 1 FALSE 0 0 NA A coding 183 549 65 613 PB.9367.2 chr17 + 5381 32 full-splice_match TMEM94 ENST00000314256.11 5213 32 193 -361 no_subtype FALSE canonical NA NA 4199 None 7 6 0 FALSE 0 0 NA C coding 1356 4068 202 4269 PB.9367.3 chr17 - 2714 4 antisense novelGene_TMEM94_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 176 None 2 18 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.9367.1 chr17 + 5397 32 novel_in_catalog TMEM94 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4211 None 5 7 1 FALSE 0 0 NA C coding 1360 4080 202 4281 PB.9041.1 chr17 + 3018 13 full-splice_match RAB11FIP4 ENST00000394744.6 1968 13 148 -1198 no_subtype FALSE canonical NA NA 1586 None 22 13 0 FALSE 0 0 NA A coding 535 1605 96 1700 PB.9041.2 chr17 + 6416 3 antisense novelGene_RP1-41C23.2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 5848 None 7 42 1 FALSE 0 0 NA A coding 103 309 3782 4090 PB.6068.3 chr10 + 2598 8 full-splice_match BUB3 ENST00000368865.8 7828 8 125 5105 no_subtype FALSE canonical NA NA 1055 None 138 6 0 FALSE 0 0 NA C coding 328 984 85 1068 PB.7774.1 chr14 + 3166 9 novel_not_in_catalog RAD51B novel NA NA NA NA no_subtype FALSE canonical NA NA 1380 None 2 17 1 TRUE 0 0 NA A coding 279 837 303 1139 PB.6068.1 chr10 + 1371 8 full-splice_match BUB3 ENST00000368858.9 1361 8 -13 3 no_subtype TRUE canonical NA NA 1055 None 13 2 0 FALSE 0 0 NA C coding 326 978 85 1062 PB.9402.1 chr17 + 5770 1 novel_in_catalog TNRC6C novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 42 0 FALSE 0 0 NA A coding 100 300 4320 4619 PB.10615.1 chr22 + 6122 17 novel_not_in_catalog IL17RA novel NA NA NA NA no_subtype TRUE canonical NA NA 6084 None 3 36 0 TRUE 0 0 NA C coding 677 2031 635 2665 PB.4652.1 chr7 + 3171 11 full-splice_match NRF1 ENST00000223190.8 2424 11 -41 -706 no_subtype FALSE canonical NA NA 1467 None 3 7 0 FALSE 0 0 NA A coding 492 1476 153 1628 PB.6248.1 chr11 + 1782 4 full-splice_match ARL14EP ENST00000282032.3 2430 4 53 595 no_subtype FALSE canonical NA NA 716 None 7 8 0 FALSE 0 0 NA A coding 260 780 163 942 PB.10615.2 chr22 + 6007 15 novel_not_in_catalog IL17RA novel NA NA NA NA no_subtype FALSE canonical NA NA 5872 None 14 38 0 TRUE 0 0 NA C coding 866 2598 92 2689 PB.5717.5 chr10 - 3137 10 full-splice_match ABI1 ENST00000376160.5 3515 10 71 307 no_subtype FALSE canonical NA NA 156 None 2 11 1 FALSE 0 0 NA C coding 475 1425 40 1464 PB.5717.4 chr10 - 1669 1 incomplete-splice_match ABI1 ENST00000490841.6 3188 7 1215 305 no_subtype FALSE canonical NA NA NA None 8 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5717.3 chr10 - 2868 9 full-splice_match ABI1 ENST00000376166.5 3441 9 84 489 no_subtype FALSE canonical NA NA 156 None 17 10 1 FALSE 0 0 NA C coding 446 1338 40 1377 PB.5717.2 chr10 - 1963 8 novel_in_catalog ABI1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 166 None 54 9 2 FALSE 0 0 NA C coding 388 1164 50 1213 PB.5717.1 chr10 - 3363 8 novel_not_in_catalog ABI1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 292 None 3 13 1 TRUE 0 0 NA C coding 291 873 176 1048 PB.4490.1 chr7 + 3309 19 novel_not_in_catalog CROT novel NA NA NA NA no_subtype FALSE canonical NA NA 2043 None 2 14 0 FALSE 0 0 NA A coding 612 1836 326 2161 PB.9214.1 chr17 + 2822 7 full-splice_match UBE2Z ENST00000360943.9 3122 7 294 6 no_subtype FALSE canonical NA NA 735 None 4 11 0 FALSE 0 0 NA A coding 246 738 166 903 PB.7455.1 chr13 + 2847 15 full-splice_match NAA16 ENST00000464857.5 2816 15 -36 5 no_subtype FALSE canonical NA NA 2737 None 2 6 0 FALSE 0 0 NA C coding 516 1548 271 1818 PB.7455.2 chr13 + 3554 1 novel_in_catalog NAA16 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA C coding 118 354 263 616 PB.7455.3 chr13 + 2923 1 novel_in_catalog NAA16 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3585.2 chr5 + 1606 5 full-splice_match GPX3 ENST00000388825.8 1636 5 28 2 no_subtype FALSE canonical NA NA 523 None 213 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9061.1 chr17 - 1827 13 full-splice_match NLE1 ENST00000442241.8 2588 13 21 740 no_subtype FALSE canonical NA NA 37 None 8 2 0 FALSE 0 0 NA A coding 485 1455 20 1474 PB.6568.1 chr11 - 1470 5 full-splice_match RAB30 ENST00000527633.5 792 5 0 -678 no_subtype FALSE canonical NA NA 164 None 6 2 0 FALSE 0 0 NA C coding 201 603 179 781 PB.2366.1 chr3 + 5790 1 genic PLCXD2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 42 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5929.1 chr10 - 3007 3 antisense novelGene_TBC1D12_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 49 None 4 21 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.9377.1 chr17 - 1791 8 full-splice_match WBP2 ENST00000254806.7 1944 8 82 71 no_subtype FALSE canonical NA NA 100 None 211 4 0 FALSE 0 0 NA C coding 261 783 42 824 PB.6508.1 chr11 + 1099 5 full-splice_match FOLR2 ENST00000298223.10 1138 5 28 11 no_subtype FALSE canonical NA NA 634 None 2 0 0 FALSE 0 0 NA A coding 272 816 109 924 PB.9377.2 chr17 - 2703 6 novel_in_catalog WBP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 114 None 2 40 0 FALSE 0 0 NA C coding 141 423 56 478 PB.3553.2 chr5 - 2920 7 novel_in_catalog GNPDA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 694 None 5 9 0 FALSE 0 0 NA C coding 289 867 701 1567 PB.10609.4 chr21 - 4118 24 novel_not_in_catalog LSS novel NA NA NA NA no_subtype FALSE canonical NA NA 36 None 12 19 2 TRUE 0 0 NA B coding 732 2196 23 2218 PB.6775.1 chr12 + 2855 2 genic KCNA5 novel NA NA NA NA no_subtype TRUE canonical NA NA 444 None 3 4 1 FALSE 0 0 NA A coding 539 1617 444 2060 PB.10609.2 chr21 - 3416 16 novel_not_in_catalog LSS novel NA NA NA NA no_subtype FALSE canonical NA NA 327 None 2 16 2 TRUE 0 0 NA B coding 389 1167 346 1512 PB.2705.2 chr4 - 1565 5 novel_in_catalog CTBP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 211 None 2 5 1 FALSE 0 0 NA A coding 187 561 212 772 PB.10609.1 chr21 - 3419 18 novel_not_in_catalog LSS novel NA NA NA NA no_subtype FALSE canonical NA NA 102 None 2 17 2 TRUE 0 0 NA B coding 500 1500 16 1515 PB.7608.27 chr14 + 1393 6 fusion TRAV20,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 847 None 2 4 1 TRUE 0 0 NA B coding 121 363 72 434 PB.2586.1 chr3 - 3705 1 genic_intron novelGene_1312 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA A coding 113 339 1415 1753 PB.9884.4 chr19 - 6792 10 novel_not_in_catalog ELL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 166 None 2 31 3 TRUE 0 0 NA C coding 300 900 32 931 PB.9884.5 chr19 - 2611 6 novel_not_in_catalog ELL novel NA NA NA NA no_subtype FALSE canonical NA NA 143 None 3 6 1 TRUE 0 0 NA C coding 300 900 9 908 PB.8254.4 chr15 + 2489 9 novel_not_in_catalog IL16 novel NA NA NA NA no_subtype FALSE canonical NA NA 2018 None 2 5 1 TRUE 0 0 NA B coding 631 1893 314 2206 PB.2474.1 chr3 + 2912 12 full-splice_match UBA5 ENST00000356232.8 3705 12 942 -149 no_subtype FALSE canonical NA NA 1261 None 23 7 0 FALSE 0 0 NA A coding 404 1212 131 1342 PB.10270.1 chr20 - 3544 1 genic_intron novelGene_58 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8677.1 chr16 + 3728 12 full-splice_match CTCF ENST00000264010.8 3939 12 196 15 no_subtype FALSE canonical NA NA 2247 None 8 2 0 FALSE 0 0 NA A coding 727 2181 249 2429 PB.8272.9 chr15 + 5910 33 novel_not_in_catalog AKAP13 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5632 None 2 10 3 TRUE 0 0 NA B coding 969 2907 3002 5908 PB.6081.1 chr10 - 1328 10 full-splice_match UROS ENST00000368797.8 1313 10 -33 18 no_subtype TRUE canonical NA NA 232 None 3 5 1 FALSE 0 0 NA A coding 265 795 259 1053 PB.3894.1 chr6 + 2469 6 full-splice_match PIM1 ENST00000373509.5 2650 6 179 2 no_subtype FALSE canonical NA NA 978 None 44 7 0 FALSE 0 0 NA C coding 313 939 195 1133 PB.5371.2 chr9 - 3346 8 full-splice_match BICD2 ENST00000375512.3 4636 8 -36 1326 no_subtype FALSE canonical NA NA 344 None 3 3 0 FALSE 0 0 NA A coding 824 2472 105 2576 PB.3894.3 chr6 + 3441 1 novel_in_catalog PIM1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3894.2 chr6 + 1566 2 incomplete-splice_match PIM1 ENST00000373509.5 2650 6 1081 3 internal_fragment FALSE canonical NA NA 76 None 5 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5180.1 chr8 + 2853 12 novel_in_catalog PPP1R16A novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 2254 None 5 8 0 FALSE 0 0 NA B coding 528 1584 1052 2635 PB.5505.1 chr9 + 3365 2 genic PRPS1P2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1330 None 3 19 0 FALSE 0 0 NA A coding 102 306 1756 2061 PB.6260.1 chr11 + 6189 17 full-splice_match HIPK3 ENST00000303296.8 7408 17 -302 1521 no_subtype FALSE canonical NA NA 3778 None 2 10 0 FALSE 0 0 NA C coding 1215 3645 608 4252 PB.3370.8 chr5 - 3281 8 novel_not_in_catalog MEF2C novel NA NA NA NA no_subtype TRUE canonical NA NA 222 None 3 7 0 TRUE 0 0 NA B coding 231 693 362 1054 PB.6260.3 chr11 + 3367 2 novel_in_catalog HIPK3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 505 None 3 16 0 FALSE 0 0 NA C coding 366 1098 508 1605 PB.6260.2 chr11 + 7529 16 full-splice_match HIPK3 ENST00000379016.7 7345 16 -191 7 no_subtype FALSE canonical NA NA 3604 None 5 19 2 FALSE 0 0 NA C coding 1194 3582 497 4078 PB.10224.5 chr20 - 1544 5 full-splice_match FKBP1A ENST00000400137.8 1622 5 68 10 no_subtype FALSE canonical NA NA 133 None 364 7 0 FALSE 0 0 NA C coding 108 324 97 420 PB.10224.4 chr20 - 2777 10 novel_not_in_catalog SDCBP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 55 None 2 21 3 TRUE 0 0 NA B coding 317 951 75 1025 PB.9069.1 chr17 + 3111 1 full-splice_match TAF15 ENST00000604434.1 2103 1 2 -1010 no_subtype FALSE canonical NA NA NA None 9 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10224.6 chr20 - 3535 5 novel_not_in_catalog FKBP1A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 133 None 4 21 1 TRUE 0 0 NA C coding 108 324 97 420 PB.1757.2 chr2 - 2639 25 full-splice_match STAT1 ENST00000361099.7 4310 25 94 1577 no_subtype FALSE canonical NA NA 139 None 589 3 0 FALSE 0 0 NA C coding 750 2250 295 2544 PB.5057.3 chr8 - 3208 4 novel_not_in_catalog SLC25A32 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1488 None 2 21 0 TRUE 0 0 NA B coding 115 345 1423 1767 PB.7283.1 chr12 - 3591 27 novel_not_in_catalog RBM19 novel NA NA NA NA no_subtype TRUE canonical NA NA 144 None 30 2 0 TRUE 0 0 NA A coding 960 2880 109 2988 PB.6096.4 chr10 - 3720 23 novel_not_in_catalog ADAM8 novel NA NA NA NA no_subtype TRUE canonical NA NA 97 None 3 11 0 FALSE 0 0 NA C coding 655 1965 52 2016 PB.1563.2 chr2 + 543 4 full-splice_match DBI ENST00000355857.7 637 4 68 26 no_subtype FALSE canonical NA NA 253 None 2 1 0 FALSE 0 0 NA C coding 87 261 64 324 PB.3566.1 chr5 + 3972 5 novel_not_in_catalog GRPEL2 novel NA NA NA NA no_subtype TRUE canonical NA NA 2317 None 4 25 1 TRUE 0 0 NA B coding 225 675 31 705 PB.6507.1 chr11 - 1065 5 full-splice_match LAMTOR1 ENST00000278671.9 1179 5 111 3 no_subtype FALSE canonical NA NA 94 None 7 1 0 FALSE 0 0 NA A coding 161 483 53 535 PB.6096.2 chr10 - 3233 23 full-splice_match ADAM8 ENST00000445355.7 3279 23 22 24 no_subtype FALSE canonical NA NA 75 None 36 8 0 FALSE 0 0 NA C coding 824 2472 30 2501 PB.8768.1 chr16 + 1431 6 novel_not_in_catalog HSD17B2 novel NA NA NA NA no_subtype FALSE canonical NA NA 974 None 16 1 0 TRUE 0 0 NA A coding 387 1161 173 1333 PB.9075.1 chr17 + 1868 12 novel_not_in_catalog GGNBP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1782 None 5 0 0 FALSE 0 0 NA B coding 528 1584 285 1868 PB.9075.2 chr17 + 1866 12 incomplete-splice_match GGNBP2 ENST00000613102.4 2847 14 32 949 3prime_fragment FALSE canonical NA NA 1776 None 3 0 0 FALSE 0 0 NA B coding 527 1581 285 1865 PB.9075.3 chr17 + 1686 11 novel_in_catalog GGNBP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1600 None 4 0 0 FALSE 0 0 NA B coding 526 1578 109 1686 PB.9075.4 chr17 + 1699 11 novel_not_in_catalog GGNBP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1614 None 3 0 0 FALSE 0 0 NA B coding 527 1581 117 1697 PB.9075.5 chr17 + 1557 7 incomplete-splice_match GGNBP2 ENST00000613102.4 2847 14 1285 5 internal_fragment FALSE canonical NA NA 921 None 3 1 0 FALSE 0 0 NA B coding 372 1116 7 1122 PB.10686.4 chr22 + 5650 15 novel_in_catalog EWSR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5261 None 2 19 1 FALSE 0 0 NA C coding 325 975 19 993 PB.9226.2 chr17 + 3522 14 full-splice_match KAT7 ENST00000424009.6 3469 14 -57 4 no_subtype FALSE canonical NA NA 1830 None 2 10 1 FALSE 0 0 NA C coding 581 1743 187 1929 PB.9226.3 chr17 + 3425 15 novel_not_in_catalog KAT7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1733 None 2 8 1 TRUE 0 0 NA C coding 560 1680 153 1832 PB.3913.1 chr6 + 3870 1 antisense novelGene_MED20_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9226.1 chr17 + 3517 15 full-splice_match KAT7 ENST00000259021.8 9644 15 190 5937 no_subtype FALSE canonical NA NA 1824 None 138 6 0 FALSE 0 0 NA C coding 611 1833 91 1923 PB.9226.7 chr17 + 1673 1 incomplete-splice_match KAT7 ENST00000424009.6 3469 14 1792 5 no_subtype FALSE canonical NA NA NA None 3 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9226.4 chr17 + 5486 14 novel_in_catalog KAT7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3784 None 2 17 0 FALSE 0 0 NA C coding 351 1053 145 1197 PB.9226.5 chr17 + 3414 14 novel_in_catalog KAT7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1721 None 3 5 0 FALSE 0 0 NA C coding 455 1365 456 1820 PB.2089.1 chr3 + 5900 18 full-splice_match PDCD6IP ENST00000307296.7 6161 18 260 1 no_subtype FALSE canonical NA NA 2549 None 7 19 0 FALSE 0 0 NA C coding 868 2604 118 2721 PB.484.1 chr1 - 3329 1 incomplete-splice_match EVI5 ENST00000370331.5 7403 18 3261 814 no_subtype FALSE canonical NA NA NA None 5 19 0 FALSE 0 0 NA A coding 101 303 1398 1700 PB.10130.1 chr19 + 3513 26 novel_in_catalog POLD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3341 None 47 4 1 FALSE 0 0 NA A coding 720 2160 1285 3444 PB.11001.1 chrX - 4394 2 full-splice_match SPIN3 ENST00000374919.4 4438 2 43 1 no_subtype FALSE canonical NA NA 278 None 2 22 0 FALSE 0 0 NA A coding 258 774 281 1054 PB.8486.1 chr16 + 3036 2 full-splice_match ANKS4B ENST00000311620.6 4352 2 62 1254 no_subtype FALSE canonical NA NA 175 None 6 9 0 FALSE 0 0 NA A coding 417 1251 12 1262 PB.4566.1 chr7 + 1659 13 novel_not_in_catalog MUC12 novel NA NA NA NA no_subtype TRUE canonical NA NA 1319 None 2 6 1 TRUE 0 0 NA B coding 382 1146 213 1358 PB.7811.3 chr14 - 5625 4 novel_not_in_catalog ABCD4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 63 None 2 44 1 TRUE 0 0 NA B coding 120 360 3994 4353 PB.3033.1 chr4 + 3036 14 incomplete-splice_match KIAA1109 ENST00000306802.8 4650 24 1609 5 internal_fragment FALSE canonical NA NA 2319 None 2 9 0 FALSE 0 0 NA B coding 770 2310 224 2533 PB.6701.1 chr11 + 2026 4 novel_in_catalog SC5D novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 456 None 6 11 0 FALSE 0 0 NA A coding 299 897 13 909 PB.5862.1 chr10 - 6579 1 antisense novelGene_KCNMA1-AS1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 36 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3900.3 chr6 - 3996 2 genic_intron novelGene_377 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1976 None 2 25 1 FALSE 0 0 NA A coding 99 297 187 483 PB.7608.29 chr14 + 1350 7 fusion TRAV22,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 802 None 4 9 1 TRUE 0 0 NA A coding 125 375 15 389 PB.3272.2 chr5 - 6523 12 novel_not_in_catalog PDE4D novel NA NA NA NA no_subtype FALSE canonical NA NA 324 None 3 39 1 TRUE 0 0 NA A coding 507 1521 423 1943 PB.4357.1 chr7 + 2724 5 novel_not_in_catalog RP5-877J2.1 novel NA NA NA NA no_subtype FALSE canonical NA NA 659 None 2 11 0 FALSE 0 0 NA A coding 174 522 315 836 PB.4357.2 chr7 + 2751 4 full-splice_match AQP1 ENST00000311813.8 2752 4 -2 3 no_subtype FALSE canonical NA NA 687 None 82 10 0 FALSE 0 0 NA A coding 269 807 58 864 PB.4883.7 chr8 + 2962 3 incomplete-splice_match TACC1 ENST00000518809.5 4116 12 1153 1 internal_fragment FALSE canonical NA NA 142 None 9 24 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8736.2 chr16 + 4190 27 novel_in_catalog DHX38 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3699 None 4 9 1 FALSE 0 0 NA C coding 1227 3681 101 3781 PB.8736.1 chr16 + 4204 27 full-splice_match DHX38 ENST00000268482.7 4608 27 395 9 no_subtype FALSE canonical NA NA 3713 None 19 6 0 FALSE 0 0 NA C coding 1227 3681 115 3795 PB.3095.1 chr4 + 3810 12 full-splice_match TRIM2 ENST00000338700.9 6735 12 -50 2975 no_subtype TRUE canonical NA NA 2278 None 3 10 0 FALSE 0 0 NA C coding 744 2232 197 2428 PB.1433.6 chr2 - 1688 11 full-splice_match AUP1 ENST00000466894.5 1658 11 3 -33 no_subtype FALSE canonical NA NA 103 None 2 7 1 FALSE 0 0 NA C coding 244 732 637 1368 PB.3095.2 chr4 + 3816 12 novel_in_catalog TRIM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2284 None 5 12 0 FALSE 0 0 NA C coding 744 2232 203 2434 PB.4586.1 chr7 - 1699 1 genic_intron novelGene_955 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1433.4 chr2 - 2783 3 novel_in_catalog AUP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1951 None 6 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1462.1 chr2 - 2123 6 full-splice_match CHMP3 ENST00000263856.8 3171 6 94 954 no_subtype FALSE canonical NA NA 80 None 160 5 0 FALSE 0 0 NA C coding 222 666 36 701 PB.2095.5 chr3 + 2604 1 full-splice_match TCEA1P2 ENST00000420496.3 906 1 -152 -1546 no_subtype FALSE canonical NA NA NA None 131 10 0 FALSE 0 0 NA A coding 301 903 153 1055 PB.101.1 chr1 + 3315 3 novel_in_catalog MINOS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 165 None 2 15 0 FALSE 0 0 NA A coding 91 273 54 326 PB.2095.2 chr3 + 1553 11 incomplete-splice_match GOLGA4 ENST00000356847.8 7673 23 17 6103 3prime_fragment FALSE canonical NA NA 1434 None 2 0 0 FALSE 0 0 NA B coding 423 1269 283 1551 PB.2095.1 chr3 + 3022 15 incomplete-splice_match GOLGA4 ENST00000356847.8 7673 23 190 4461 3prime_fragment FALSE canonical NA NA 1876 None 51 0 0 FALSE 0 0 NA B coding 971 2913 110 3022 PB.6831.2 chr12 + 3019 2 novel_not_in_catalog ETV6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1484 None 4 22 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.918.3 chr1 - 3004 4 incomplete-splice_match EDEM3 ENST00000466392.1 491 5 113 -2626 5prime_fragment FALSE canonical NA NA 21 None 2 10 0 FALSE 0 0 NA B coding 230 690 91 780 PB.6175.2 chr11 + 1166 3 full-splice_match TIMM10B ENST00000254616.10 2840 3 52 1622 no_subtype FALSE canonical NA NA 153 None 2 5 0 FALSE 0 0 NA C coding 103 309 19 327 PB.6175.3 chr11 + 1355 2 full-splice_match TIMM10B ENST00000528908.1 593 2 7 -769 no_subtype FALSE canonical NA NA 345 None 5 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5769.12 chr10 + 876 1 genic_intron novelGene_486 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.659.4 chr1 - 2519 4 novel_not_in_catalog ENSA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 21 None 7 10 0 TRUE 0 0 NA C coding 117 351 146 496 PB.3445.1 chr5 - 1814 18 full-splice_match ALDH7A1 ENST00000409134.7 4964 18 213 2937 no_subtype FALSE canonical NA NA 199 None 9 0 0 FALSE 0 0 NA A coding 539 1617 8 1624 PB.2804.1 chr4 + 3839 14 novel_not_in_catalog FAM114A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1599 None 21 14 0 TRUE 0 0 NA A coding 563 1689 10 1698 PB.9169.7 chr17 + 2579 12 novel_in_catalog GRN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2139 None 2 4 1 FALSE 0 0 NA C coding 443 1329 946 2274 PB.10581.3 chr21 + 1703 17 novel_not_in_catalog PDE9A novel NA NA NA NA no_subtype FALSE canonical NA NA 1483 None 2 2 0 TRUE 0 0 NA B coding 386 1158 337 1494 PB.9169.5 chr17 + 2690 11 novel_in_catalog GRN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1929 None 3 2 0 FALSE 0 0 NA C coding 477 1431 808 2238 PB.9169.2 chr17 + 1677 10 novel_not_in_catalog GRN novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1234 None 4 1 0 TRUE 0 0 NA C coding 249 747 623 1369 PB.9169.3 chr17 + 2691 11 novel_in_catalog GRN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2249 None 2 11 0 FALSE 0 0 NA C coding 249 747 1638 2384 PB.5890.1 chr10 + 3206 1 novel_in_catalog PTEN novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9169.1 chr17 + 2114 13 full-splice_match GRN ENST00000053867.7 2342 13 228 0 no_subtype FALSE canonical NA NA 1672 None 289 0 0 FALSE 0 0 NA C coding 593 1779 29 1807 PB.5398.1 chr9 - 3234 15 novel_not_in_catalog TBC1D2 novel NA NA NA NA no_subtype TRUE canonical NA NA 475 None 26 3 0 TRUE 0 0 NA B coding 928 2784 107 2890 PB.10577.4 chr21 + 2144 1 full-splice_match RNA5SP492 ENST00000411330.1 114 1 -2031 1 no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A coding 166 498 462 959 PB.9502.4 chr18 - 2699 17 incomplete-splice_match ROCK1 ENST00000635540.1 5656 34 -655 3612 internal_fragment FALSE canonical NA NA 858 None 19 0 0 FALSE 0 0 NA B coding 644 1932 766 2697 PB.9502.3 chr18 - 2969 18 incomplete-splice_match ROCK1 ENST00000635540.1 5656 34 -718 3405 internal_fragment FALSE canonical NA NA 921 None 13 0 0 FALSE 0 0 NA B coding 713 2139 829 2967 PB.10577.3 chr21 + 2585 14 novel_in_catalog ABCG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1810 None 2 10 0 FALSE 0 0 NA C coding 603 1809 122 1930 PB.9502.1 chr18 - 3461 22 incomplete-splice_match ROCK1 ENST00000635540.1 5656 34 -772 2967 internal_fragment FALSE canonical NA NA 975 None 77 3 0 FALSE 0 0 NA B coding 859 2577 883 3459 PB.10577.1 chr21 + 3007 15 full-splice_match ABCG1 ENST00000361802.6 3034 15 23 4 no_subtype FALSE canonical NA NA 1930 None 24 4 0 FALSE 0 0 NA C coding 678 2034 123 2156 PB.10206.1 chr19 + 735 6 full-splice_match RPS5 ENST00000196551.7 740 6 2 3 no_subtype FALSE canonical NA NA 616 None 17 0 0 FALSE 0 0 NA A coding 204 612 71 682 PB.1251.1 chr2 + 2764 3 full-splice_match LBH ENST00000395323.7 2933 3 166 3 no_subtype FALSE canonical NA NA 171 None 164 10 0 FALSE 0 0 NA C coding 105 315 43 357 PB.3502.10 chr5 - 2660 19 novel_in_catalog BRD8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 36 None 2 14 5 FALSE 0 0 NA C coding 793 2379 18 2396 PB.5937.1 chr10 - 1537 17 full-splice_match BLNK ENST00000224337.9 1784 17 -29 276 no_subtype FALSE canonical NA NA 218 None 23 0 0 FALSE 0 0 NA C coding 455 1365 172 1536 PB.5638.1 chr9 + 1727 9 incomplete-splice_match NELFB ENST00000634710.1 2565 13 829 9 internal_fragment FALSE canonical NA NA 970 None 2 6 0 FALSE 0 0 NA A coding 364 1092 23 1114 PB.8153.1 chr15 - 2507 5 full-splice_match RASL12 ENST00000220062.8 2640 5 129 4 no_subtype FALSE canonical NA NA 251 None 2 17 0 FALSE 0 0 NA A coding 266 798 149 946 PB.10362.2 chr20 - 2587 9 novel_not_in_catalog SLA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 329 None 4 13 1 FALSE 0 0 NA C coding 261 783 462 1244 PB.10362.3 chr20 - 3634 6 novel_in_catalog SLA2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 360 None 2 19 0 FALSE 0 0 NA C coding 186 558 404 961 PB.10362.1 chr20 - 2529 8 full-splice_match SLA2 ENST00000262866.8 2757 8 20 208 no_subtype FALSE canonical NA NA 360 None 24 12 0 FALSE 0 0 NA C coding 261 783 404 1186 PB.8937.1 chr17 + 3082 2 full-splice_match HS3ST3B1 ENST00000360954.2 5367 2 13 2272 no_subtype FALSE canonical NA NA 977 None 15 14 0 FALSE 0 0 NA A coding 390 1170 424 1593 PB.7307.3 chr12 - 2551 11 full-splice_match PXN ENST00000424649.6 3683 11 58 1074 no_subtype FALSE canonical NA NA 97 None 446 7 0 FALSE 0 0 NA C coding 557 1671 85 1755 PB.9175.1 chr17 - 3031 9 full-splice_match GFAP ENST00000253408.9 3086 9 52 3 no_subtype FALSE canonical NA NA 475 None 2 12 1 FALSE 0 0 NA A coding 432 1296 15 1310 PB.8937.2 chr17 + 5746 1 full-splice_match RP11-214O1.2 ENST00000583262.1 1652 1 -2772 -1322 no_subtype FALSE canonical NA NA NA None 2 30 0 FALSE 0 0 NA A coding 185 555 438 992 PB.5052.1 chr8 - 3104 2 genic_intron novelGene_933 novel NA NA NA NA no_subtype FALSE canonical NA NA 1708 None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5618.1 chr9 + 2851 1 antisense novelGene_CAMSAP1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1147.3 chr1 - 6208 21 novel_not_in_catalog CEP170 novel NA NA NA NA no_subtype FALSE canonical NA NA 194 None 3 3 0 TRUE 0 0 NA B coding 1584 4752 236 4987 PB.1858.1 chr2 + 2861 9 full-splice_match PNKD ENST00000258362.7 2991 9 126 4 no_subtype FALSE canonical NA NA 881 None 4 10 0 FALSE 0 0 NA A coding 318 954 99 1052 PB.4123.1 chr6 + 3048 2 full-splice_match TMEM200A ENST00000617887.4 2899 2 150 -299 no_subtype FALSE canonical NA NA 94 None 3 5 0 FALSE 0 0 NA A coding 491 1473 111 1583 PB.4250.2 chr6 - 1085 10 novel_not_in_catalog RNASET2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 24 None 40 2 1 TRUE 0 0 NA A coding 256 768 311 1078 PB.6482.1 chr11 + 1126 6 full-splice_match AIP ENST00000279146.7 1221 6 92 3 no_subtype FALSE canonical NA NA 813 None 10 1 0 FALSE 0 0 NA A coding 330 990 27 1016 PB.10688.3 chr22 - 2941 19 novel_in_catalog THOC5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 106 None 2 11 2 FALSE 0 0 NA B coding 410 1230 1583 2812 PB.3477.1 chr5 - 1773 9 full-splice_match VDAC1 ENST00000395047.6 1873 9 133 -33 no_subtype FALSE canonical NA NA 63 None 4 5 0 FALSE 0 0 NA A coding 283 849 70 918 PB.10688.1 chr22 - 2230 20 novel_not_in_catalog THOC5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 41 None 3 1 1 TRUE 0 0 NA B coding 683 2049 52 2100 PB.11156.1 chrX - 2918 1 genic_intron novelGene_1143 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 6 0 FALSE 0 0 NA A coding 99 297 1273 1569 PB.133.1 chr1 - 4082 25 full-splice_match ASAP3 ENST00000336689.7 4050 25 -33 1 no_subtype FALSE canonical NA NA 207 None 7 4 0 FALSE 0 0 NA A coding 903 2709 79 2787 PB.10688.4 chr22 - 2220 20 novel_in_catalog THOC5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 106 None 2 2 0 FALSE 0 0 NA B coding 694 2082 11 2092 PB.3814.1 chr6 - 1961 1 full-splice_match C6orf47 ENST00000375911.1 2475 1 21 493 no_subtype FALSE canonical NA NA NA None 6 5 0 FALSE 0 0 NA A coding 294 882 805 1686 PB.9663.2 chr19 - 1348 7 full-splice_match AES ENST00000327141.8 1608 7 259 1 no_subtype FALSE canonical NA NA 125 None 10 4 0 FALSE 0 0 NA A coding 197 591 99 689 PB.6032.1 chr10 + 1648 2 incomplete-splice_match CASP7 ENST00000452490.3 2271 6 616 7 internal_fragment FALSE canonical NA NA 58 None 2 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7206.3 chr12 + 5747 2 genic RP11-43D4.2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1807 None 3 38 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6066.1 chr10 - 4383 4 novel_in_catalog IKZF5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 106 None 3 19 0 FALSE 0 0 NA C coding 419 1257 153 1409 PB.8710.1 chr16 + 2966 5 full-splice_match CYB5B ENST00000307892.12 4286 5 68 1252 no_subtype FALSE canonical NA NA 383 None 37 14 0 FALSE 0 0 NA A coding 150 450 22 471 PB.6066.2 chr10 - 2903 5 full-splice_match IKZF5 ENST00000368886.9 4555 5 7 1645 no_subtype FALSE canonical NA NA 117 None 11 9 0 FALSE 0 0 NA C coding 419 1257 315 1571 PB.2836.2 chr4 + 2750 2 novel_in_catalog SLAIN2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 659 None 2 16 0 FALSE 0 0 NA C coding 194 582 271 852 PB.2836.3 chr4 + 2534 9 novel_in_catalog SLAIN2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2024 None 2 7 0 FALSE 0 0 NA C coding 607 1821 268 2088 PB.9722.1 chr19 - 2639 19 full-splice_match XAB2 ENST00000358368.4 2667 19 24 4 no_subtype FALSE canonical NA NA 65 None 25 2 1 FALSE 0 0 NA A coding 855 2565 15 2579 PB.2836.1 chr4 + 3841 8 full-splice_match SLAIN2 ENST00000264313.10 6299 8 154 2304 no_subtype FALSE canonical NA NA 1943 None 13 9 0 FALSE 0 0 NA C coding 581 1743 265 2007 PB.10513.2 chr21 - 3054 4 full-splice_match CYYR1 ENST00000299340.8 3101 4 17 30 no_subtype FALSE canonical NA NA 400 None 25 9 0 FALSE 0 0 NA A coding 262 786 4 789 PB.10351.12 chr20 - 2088 13 full-splice_match NFS1 ENST00000374092.8 3012 13 7 917 no_subtype FALSE canonical NA NA 161 None 3 2 0 FALSE 0 0 NA A coding 457 1371 65 1435 PB.5927.1 chr10 + 3428 3 full-splice_match SLC35G1 ENST00000427197.1 2402 3 58 -1084 no_subtype FALSE canonical NA NA 362 None 6 19 0 FALSE 0 0 NA A coding 365 1095 4 1098 PB.10351.10 chr20 - 3173 1 incomplete-splice_match RBM12 ENST00000374104.7 5213 3 341 1700 no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA C coding 854 2562 111 2672 PB.11144.8 chrX + 3456 28 novel_not_in_catalog STAG2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3148 None 2 5 2 TRUE 0 0 NA C coding 979 2937 24 2960 PB.6369.1 chr11 + 2011 2 full-splice_match FEN1 ENST00000305885.2 2296 2 276 9 no_subtype FALSE canonical NA NA 116 None 4 7 0 FALSE 0 0 NA A coding 380 1140 138 1277 PB.5343.1 chr9 - 5681 1 genic_intron novelGene_766 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 41 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1409.2 chr2 + 2823 1 antisense novelGene_PAIP2B_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 14 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1256.1 chr2 + 3763 6 full-splice_match EHD3 ENST00000322054.9 4636 6 -185 1058 no_subtype FALSE canonical NA NA 1550 None 5 11 0 FALSE 0 0 NA A coding 535 1605 471 2075 PB.4145.3 chr6 - 2995 16 novel_in_catalog HBS1L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 171 None 2 7 0 FALSE 0 0 NA C coding 633 1899 129 2027 PB.4605.1 chr7 - 3066 11 novel_not_in_catalog PNPLA8 novel NA NA NA NA no_subtype FALSE canonical NA NA 97 None 20 4 0 TRUE 0 0 NA B coding 782 2346 181 2526 PB.6806.3 chr12 - 3697 17 novel_not_in_catalog CD163 novel NA NA NA NA no_subtype FALSE canonical NA NA 133 None 179 3 1 FALSE 0 0 NA A coding 1114 3342 103 3444 PB.4932.10 chr8 + 1428 1 incomplete-splice_match LYN ENST00000520220.6 5808 13 1586 2795 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4462.2 chr7 + 1450 4 novel_in_catalog NCF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 249 None 46 5 0 FALSE 0 0 NA C coding 132 396 21 416 PB.6008.1 chr10 + 6473 37 novel_not_in_catalog PDCD11 novel NA NA NA NA no_subtype TRUE canonical NA NA 5560 None 9 6 1 TRUE 0 0 NA B coding 1871 5613 117 5729 PB.3467.6 chr5 - 2027 11 novel_not_in_catalog IRF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 228 None 3 15 3 TRUE 0 0 NA C coding 273 819 234 1052 PB.3467.5 chr5 - 1464 10 full-splice_match IRF1 ENST00000245414.8 3579 10 25 2090 no_subtype FALSE canonical NA NA 229 None 134 2 0 FALSE 0 0 NA C coding 325 975 235 1209 PB.5397.8 chr9 - 2833 2 novel_not_in_catalog TRIM14 novel NA NA NA NA no_subtype FALSE canonical NA NA 786 None 3 27 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.7392.1 chr13 - 1870 13 novel_not_in_catalog MICU2 novel NA NA NA NA no_subtype TRUE canonical NA NA 229 None 40 3 0 TRUE 0 0 NA A coding 434 1302 20 1321 PB.3467.1 chr5 - 2746 11 novel_not_in_catalog IRF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 229 None 61 7 0 TRUE 0 0 NA C coding 325 975 235 1209 PB.1302.1 chr2 + 1684 1 antisense novelGene_ZFP36L2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 11 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3393.1 chr5 - 3049 11 novel_not_in_catalog RIOK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 104 None 5 19 0 TRUE 0 0 NA C coding 552 1656 39 1694 PB.1870.2 chr2 - 3734 16 full-splice_match ATG9A ENST00000361242.8 3130 16 61 -665 no_subtype FALSE canonical NA NA 75 None 43 5 0 FALSE 0 0 NA C coding 839 2517 157 2673 PB.3937.1 chr6 - 1503 9 full-splice_match YIPF3 ENST00000372422.6 1576 9 52 21 no_subtype FALSE canonical NA NA 212 None 72 3 0 FALSE 0 0 NA A coding 350 1050 132 1181 PB.5848.1 chr10 + 4433 24 novel_not_in_catalog SEC24C novel NA NA NA NA no_subtype TRUE canonical NA NA 3230 None 35 8 0 TRUE 0 0 NA B coding 1094 3282 87 3368 PB.5848.2 chr10 + 4476 25 novel_not_in_catalog SEC24C novel NA NA NA NA no_subtype FALSE canonical NA NA 3273 None 3 10 0 TRUE 0 0 NA B coding 1117 3351 61 3411 PB.1870.6 chr2 - 3693 16 novel_not_in_catalog ATG9A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 57 None 2 4 1 TRUE 0 0 NA C coding 839 2517 113 2629 PB.226.1 chr1 + 1410 11 full-splice_match EIF3I ENST00000373586.1 1458 11 37 11 no_subtype FALSE canonical NA NA 931 None 81 2 0 FALSE 0 0 NA A coding 325 975 36 1010 PB.7960.1 chr15 - 2450 1 full-splice_match RP11-403B2.10 ENST00000622705.1 1090 1 -79 -1281 no_subtype FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA A coding 219 657 78 734 PB.9369.1 chr17 + 3421 25 incomplete-splice_match LLGL2 ENST00000392550.7 3509 26 87 1 internal_fragment TRUE canonical NA NA 3085 None 11 2 0 FALSE 0 0 NA A coding 1020 3060 31 3090 PB.1094.1 chr1 - 2771 3 novel_not_in_catalog JMJD4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 472 None 2 17 1 TRUE 0 0 NA C coding 102 306 2102 2407 PB.2642.1 chr3 + 3059 17 full-splice_match SENP2 ENST00000296257.9 5717 17 200 2458 no_subtype FALSE canonical NA NA 1747 None 40 9 1 FALSE 0 0 NA C coding 589 1767 41 1807 PB.4605.2 chr7 - 2985 11 novel_not_in_catalog PNPLA8 novel NA NA NA NA no_subtype TRUE canonical NA NA 134 None 9 4 0 TRUE 0 0 NA B coding 682 2046 391 2436 PB.5242.1 chr9 + 1848 8 full-splice_match MTAP ENST00000380172.8 6122 8 151 4123 no_subtype FALSE canonical NA NA 868 None 4 3 0 FALSE 0 0 NA A coding 283 849 56 904 PB.4690.1 chr7 + 2987 2 antisense novelGene_CNOT4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 466 None 10 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.117.1 chr1 - 3497 27 full-splice_match USP48 ENST00000308271.13 4595 27 441 657 no_subtype FALSE canonical NA NA 342 None 6 1 0 FALSE 0 0 NA A coding 1035 3105 209 3313 PB.2450.9 chr3 + 5567 5 novel_not_in_catalog ABTB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 4630 None 2 42 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.1240.3 chr2 + 3225 12 novel_in_catalog ZNF512 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1288 None 3 5 0 FALSE 0 0 NA C coding 513 1539 56 1594 PB.8329.1 chr15 + 3004 20 novel_not_in_catalog LRRK1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2748 None 5 7 0 TRUE 0 0 NA B coding 912 2736 253 2988 PB.2450.5 chr3 + 2507 9 novel_in_catalog ABTB1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1851 None 2 6 0 FALSE 0 0 NA C coding 142 426 1630 2055 PB.2450.2 chr3 + 1849 12 full-splice_match ABTB1 ENST00000475042.5 1915 12 58 8 no_subtype FALSE canonical NA NA 1205 None 3 3 0 FALSE 0 0 NA C coding 453 1359 51 1409 PB.2450.3 chr3 + 1919 12 novel_not_in_catalog ABTB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1265 None 6 3 1 FALSE 0 0 NA C coding 439 1317 153 1469 PB.2450.1 chr3 + 1913 12 full-splice_match ABTB1 ENST00000232744.12 1965 12 57 -5 no_subtype FALSE canonical NA NA 1259 None 61 3 0 FALSE 0 0 NA C coding 478 1434 30 1463 PB.5236.1 chr9 - 826 6 full-splice_match RPS6 ENST00000380394.8 1387 6 18 543 no_subtype FALSE canonical NA NA 47 None 53 0 0 FALSE 0 0 NA C coding 249 747 42 788 PB.5236.2 chr9 - 2771 2 novel_not_in_catalog RPS6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1567 None 2 51 1 TRUE 0 0 NA C coding 103 309 20 328 PB.3642.1 chr5 + 3288 11 novel_not_in_catalog GABRP novel NA NA NA NA no_subtype FALSE canonical NA NA 1203 None 116 7 0 TRUE 0 0 NA A coding 440 1320 184 1503 PB.6590.1 chr11 + 1735 13 incomplete-splice_match CEP295 ENST00000325212.10 8057 30 62 6260 3prime_fragment FALSE canonical NA NA 1633 None 2 1 0 FALSE 0 0 NA A coding 545 1635 101 1735 PB.715.8 chr1 + 2875 2 full-splice_match ZBTB7B ENST00000292176.2 2129 2 793 -1539 no_subtype FALSE canonical NA NA 574 None 9 8 0 FALSE 0 0 NA C coding 225 675 363 1037 PB.4323.1 chr7 - 433 3 full-splice_match TOMM7 ENST00000358435.8 778 3 4 341 no_subtype FALSE canonical NA NA 171 None 3 1 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5397.6 chr9 - 1625 2 antisense novelGene_NANS_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 424 None 3 9 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6331.4 chr11 - 3112 1 genic_intron novelGene_556 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4272.1 chr7 + 2998 22 novel_not_in_catalog IQCE novel NA NA NA NA no_subtype TRUE canonical NA NA 2158 None 2 9 1 FALSE 0 0 NA A coding 721 2163 112 2274 PB.8349.1 chr16 + 2754 13 novel_not_in_catalog PIGQ novel NA NA NA NA no_subtype FALSE canonical NA NA 2564 None 15 11 1 TRUE 0 0 NA A coding 581 1743 126 1868 PB.11026.1 chrX - 1664 2 full-splice_match CXCR3 ENST00000373693.3 1624 2 -49 9 no_subtype FALSE canonical NA NA 129 None 35 4 0 FALSE 0 0 NA C coding 368 1104 118 1221 PB.1006.3 chr1 + 3656 24 novel_not_in_catalog IKBKE novel NA NA NA NA no_subtype FALSE canonical NA NA 2888 None 2 15 0 TRUE 0 0 NA B coding 284 852 346 1197 PB.8134.4 chr15 + 2401 16 full-splice_match USP3 ENST00000559192.5 5499 16 -98 3196 no_subtype FALSE canonical NA NA 1617 None 2 2 0 FALSE 0 0 NA C coding 435 1305 476 1780 PB.8134.3 chr15 + 2286 15 full-splice_match USP3 ENST00000380324.7 2333 15 24 23 no_subtype FALSE canonical NA NA 1502 None 2 1 0 FALSE 0 0 NA C coding 520 1560 106 1665 PB.8134.2 chr15 + 5400 17 novel_not_in_catalog USP3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2988 None 5 34 3 TRUE 0 0 NA C coding 520 1560 120 1679 PB.8134.1 chr15 + 2810 17 novel_not_in_catalog USP3 novel NA NA NA NA no_subtype TRUE canonical NA NA 2390 None 9 5 1 FALSE 0 0 NA C coding 520 1560 147 1706 PB.7046.1 chr12 - 802 8 full-splice_match NACA ENST00000356769.7 2690 8 1883 5 no_subtype FALSE canonical NA NA 52 None 11 1 0 FALSE 0 0 NA A coding 215 645 55 699 PB.2442.1 chr3 - 2726 1 incomplete-splice_match ZNF148 ENST00000360647.8 9651 9 6808 118 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7620.1 chr14 + 3511 4 full-splice_match BCL2L2 ENST00000250405.9 3605 4 81 13 no_subtype FALSE canonical NA NA 580 None 2 6 0 FALSE 0 0 NA A coding 193 579 149 727 PB.10306.4 chr20 + 2726 2 novel_not_in_catalog ENTPD6 novel NA NA NA NA no_subtype FALSE canonical NA NA 800 None 2 17 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.11148.3 chrX + 2940 7 novel_not_in_catalog SASH3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1389 None 3 7 0 TRUE 0 0 NA B coding 318 954 136 1089 PB.10306.6 chr20 + 2611 14 novel_in_catalog ENTPD6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1397 None 2 7 0 FALSE 0 0 NA B coding 456 1368 126 1493 PB.10306.1 chr20 + 2620 15 novel_not_in_catalog ENTPD6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1406 None 29 5 0 FALSE 0 0 NA B coding 456 1368 135 1502 PB.10306.3 chr20 + 2591 14 novel_not_in_catalog ENTPD6 novel NA NA NA NA no_subtype TRUE canonical NA NA 1378 None 2 7 0 FALSE 0 0 NA B coding 437 1311 164 1474 PB.3199.1 chr5 - 2661 5 novel_not_in_catalog AMACR novel NA NA NA NA no_subtype FALSE non_canonical NA NA 566 None 3 9 0 TRUE 0 0 NA A coding 298 894 1465 2358 PB.524.2 chr1 + 2858 2 full-splice_match S1PR1 ENST00000305352.6 2909 2 131 -80 no_subtype FALSE canonical NA NA 81 None 158 2 0 FALSE 0 0 NA C coding 382 1146 245 1390 PB.814.1 chr1 - 3153 9 novel_not_in_catalog OLFML2B novel NA NA NA NA no_subtype FALSE canonical NA NA 601 None 13 12 0 TRUE 0 0 NA A coding 750 2250 428 2677 PB.11148.1 chrX + 2516 9 novel_not_in_catalog SASH3 novel NA NA NA NA no_subtype FALSE canonical NA NA 960 None 383 2 0 TRUE 0 0 NA B coding 380 1140 9 1148 PB.9381.1 chr17 - 1871 1 incomplete-splice_match ACOX1 ENST00000293217.9 7514 14 5635 9 no_subtype FALSE canonical NA NA NA None 12 21 0 FALSE 0 0 NA C coding 106 318 174 491 PB.254.1 chr1 - 2617 2 full-splice_match C1orf216 ENST00000270815.4 3218 2 597 4 no_subtype FALSE canonical NA NA 169 None 3 11 0 FALSE 0 0 NA A coding 229 687 175 861 PB.8429.3 chr16 - 1574 1 novel_in_catalog USP7 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 4 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2557.1 chr3 + 1571 7 full-splice_match SCHIP1 ENST00000482804.1 1799 7 239 -11 no_subtype FALSE canonical NA NA 933 None 2 4 0 FALSE 0 0 NA A coding 260 780 203 982 PB.5909.2 chr10 + 3686 10 full-splice_match PCGF5 ENST00000336126.5 7018 10 -21 3353 no_subtype FALSE canonical NA NA 976 None 4 18 0 FALSE 0 0 NA C coding 256 768 254 1021 PB.4376.24 chr7 - 6191 2 genic_intron novelGene_368 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 6054 None 2 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1586.1 chr2 - 1448 5 full-splice_match CCDC115 ENST00000259229.6 1646 5 194 4 no_subtype FALSE canonical NA NA 141 None 22 9 0 FALSE 0 0 NA A coding 180 540 31 570 PB.6468.4 chr11 - 2900 3 novel_in_catalog RBM4B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 114 None 3 19 1 FALSE 0 0 NA C coding 359 1077 127 1203 PB.5909.4 chr10 + 1687 1 genic_intron novelGene_837 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.585.1 chr1 - 1585 6 incomplete-splice_match AP4B1 ENST00000369567.5 2144 7 245 314 5prime_fragment FALSE canonical NA NA 476 None 2 0 0 FALSE 0 0 NA A coding 487 1461 119 1579 PB.1887.2 chr2 + 3023 4 full-splice_match MRPL44 ENST00000258383.3 1748 4 63 -1338 no_subtype FALSE canonical NA NA 833 None 12 21 0 FALSE 0 0 NA C coding 332 996 7 1002 PB.3185.1 chr5 - 1427 7 full-splice_match FAM134B ENST00000399793.6 3145 7 78 1640 no_subtype FALSE canonical NA NA 343 None 4 2 0 FALSE 0 0 NA A coding 356 1068 309 1376 PB.5449.3 chr9 - 4322 28 full-splice_match FKBP15 ENST00000238256.7 4336 28 -1 15 no_subtype FALSE canonical NA NA 172 None 15 10 0 FALSE 0 0 NA C coding 1219 3657 120 3776 PB.2563.1 chr3 - 2921 6 antisense novelGene_PPM1L_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2621 None 4 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9228.2 chr17 - 4732 51 full-splice_match COL1A1 ENST00000225964.9 6727 51 3 1992 no_subtype FALSE canonical NA NA 219 None 78 3 0 FALSE 0 0 NA C coding 261 783 952 1734 PB.9228.3 chr17 - 2818 25 incomplete-splice_match COL1A1 ENST00000225964.9 6727 51 1959 1950 5prime_fragment FALSE canonical NA NA 35 None 3 3 0 FALSE 0 0 NA C coding 276 828 652 1479 PB.5244.2 chr9 - 2681 14 full-splice_match PLAA ENST00000397292.7 4234 14 289 1264 no_subtype FALSE canonical NA NA 278 None 54 3 0 FALSE 0 0 NA C coding 795 2385 130 2514 PB.5244.3 chr9 - 3008 15 novel_not_in_catalog PLAA novel NA NA NA NA no_subtype FALSE canonical NA NA 334 None 2 8 0 FALSE 0 0 NA C coding 524 1572 186 1757 PB.5244.1 chr9 - 2991 15 novel_not_in_catalog PLAA novel NA NA NA NA no_subtype TRUE non_canonical NA NA 308 None 2 13 0 FALSE 0 0 NA C coding 524 1572 160 1731 PB.682.1 chr1 - 3035 12 novel_not_in_catalog RORC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 73 None 2 8 1 TRUE 0 0 NA C coding 518 1554 34 1587 PB.5622.1 chr9 - 3626 18 incomplete-splice_match SEC16A ENST00000453963.5 4834 26 1201 7 5prime_fragment TRUE canonical NA NA 38 None 2 10 0 FALSE 0 0 NA A coding 631 1893 84 1976 PB.4258.2 chr6 - 880 6 full-splice_match PSMB1 ENST00000262193.6 928 6 38 10 no_subtype FALSE canonical NA NA 174 None 2 1 0 FALSE 0 0 NA C coding 241 723 62 784 PB.7291.1 chr12 - 955 8 full-splice_match TESC ENST00000335209.11 1041 8 54 32 no_subtype FALSE canonical NA NA 191 None 3 1 0 FALSE 0 0 NA A coding 214 642 134 775 PB.10973.1 chrX + 5731 2 novel_not_in_catalog PPP1R3F novel NA NA NA NA no_subtype FALSE canonical NA NA 2714 None 2 40 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.8055.1 chr15 - 1775 1 novel_in_catalog EIF3J-AS1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2987.1 chr4 + 2509 4 novel_not_in_catalog TET2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1065 None 8 2 1 TRUE 0 0 NA B coding 435 1305 1204 2508 PB.7267.3 chr12 + 3144 13 novel_not_in_catalog TRAFD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2282 None 7 0 0 TRUE 0 0 NA B coding 582 1746 591 2336 PB.7267.2 chr12 + 2629 13 novel_not_in_catalog TRAFD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1763 None 119 0 0 TRUE 0 0 NA B coding 582 1746 72 1817 PB.3921.1 chr6 + 5490 47 full-splice_match UBR2 ENST00000372901.1 7857 47 144 2223 no_subtype TRUE canonical NA NA 5240 None 10 9 1 FALSE 0 0 NA C coding 1755 5265 115 5379 PB.3921.3 chr6 - 1777 2 antisense novelGene_UBR2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 298 None 4 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3921.4 chr6 - 2660 1 antisense novelGene_UBR2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5666.5 chr10 - 3156 1 genic_intron novelGene_42 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.944.5 chr1 + 3980 10 full-splice_match NEK7 ENST00000367385.8 4149 10 162 7 no_subtype FALSE canonical NA NA 978 None 2 9 0 FALSE 0 0 NA C coding 302 906 181 1086 PB.10561.1 chr21 - 5757 4 antisense novelGene_DYRK1A_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 733 None 2 55 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.5475.1 chr9 - 2602 11 novel_not_in_catalog PSMD5 novel NA NA NA NA no_subtype FALSE canonical NA NA 180 None 2 12 0 TRUE 0 0 NA A coding 504 1512 8 1519 PB.2959.1 chr4 + 3702 2 genic_intron novelGene_830 novel NA NA NA NA no_subtype TRUE canonical NA NA 3592 None 2 24 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.649.1 chr1 + 1358 6 full-splice_match PLEKHO1 ENST00000369124.4 2050 6 283 409 no_subtype FALSE canonical NA NA 520 None 2 1 0 FALSE 0 0 NA A coding 237 711 512 1222 PB.842.3 chr1 + 2870 6 full-splice_match RCSD1 ENST00000537350.5 3044 6 164 10 no_subtype FALSE canonical NA NA 1295 None 6 6 0 FALSE 0 0 NA C coding 386 1158 168 1325 PB.3030.1 chr4 - 3685 19 full-splice_match BBS7 ENST00000264499.8 3752 19 63 4 no_subtype FALSE canonical NA NA 157 None 2 14 0 FALSE 0 0 NA A coding 715 2145 122 2266 PB.2162.1 chr3 - 5557 32 novel_not_in_catalog SMARCC1 novel NA NA NA NA no_subtype TRUE canonical NA NA 271 None 10 15 1 TRUE 0 0 NA A coding 1105 3315 77 3391 PB.6617.8 chr11 - 1976 11 novel_not_in_catalog CASP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 33 None 2 3 0 TRUE 0 0 NA C coding 404 1212 27 1238 PB.10414.1 chr20 + 2772 2 full-splice_match ZSWIM3 ENST00000255152.2 2773 2 0 1 no_subtype FALSE canonical NA NA 364 None 10 6 0 FALSE 0 0 NA A coding 696 2088 210 2297 PB.10287.4 chr20 + 2731 22 novel_not_in_catalog SEC23B novel NA NA NA NA no_subtype TRUE canonical NA NA 2293 None 3 3 1 TRUE 0 0 NA B coding 767 2301 80 2380 PB.1830.1 chr2 - 2850 1 genic_intron novelGene_1394 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10287.1 chr20 + 2754 21 novel_not_in_catalog SEC23B novel NA NA NA NA no_subtype FALSE canonical NA NA 2316 None 109 1 0 TRUE 0 0 NA B coding 767 2301 103 2403 PB.10287.2 chr20 + 2717 21 novel_not_in_catalog SEC23B novel NA NA NA NA no_subtype FALSE canonical NA NA 2346 None 4 2 0 TRUE 0 0 NA B coding 767 2301 133 2433 PB.10287.3 chr20 + 2738 21 novel_not_in_catalog SEC23B novel NA NA NA NA no_subtype FALSE canonical NA NA 2300 None 10 3 0 TRUE 0 0 NA B coding 767 2301 87 2387 PB.836.1 chr1 - 2514 7 full-splice_match GPA33 ENST00000367868.3 2802 7 270 18 no_subtype FALSE canonical NA NA 117 None 8 8 0 FALSE 0 0 NA C coding 319 957 75 1031 PB.715.7 chr1 + 3778 3 novel_not_in_catalog ZBTB7B novel NA NA NA NA no_subtype FALSE canonical NA NA 1477 None 11 9 0 FALSE 0 0 NA C coding 539 1617 324 1940 PB.6998.28 chr12 + 2807 1 full-splice_match PCBP2-OT1 ENST00000634357.1 590 1 575 -2792 no_subtype FALSE canonical NA NA NA None 6 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2428.1 chr3 - 1666 8 full-splice_match HSPBAP1 ENST00000306103.2 1953 8 27 260 no_subtype FALSE canonical NA NA 181 None 5 5 0 FALSE 0 0 NA A coding 488 1464 118 1581 PB.7005.2 chr12 - 2727 1 full-splice_match CBX5 ENST00000577868.1 80 1 -2201 -446 no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6998.22 chr12 + 1601 15 novel_not_in_catalog PCBP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1395 None 2 5 1 TRUE 0 0 NA C coding 237 711 348 1058 PB.11148.4 chrX + 1511 1 genic RP4-753P9.3 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 2 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6998.20 chr12 + 1577 14 novel_in_catalog PCBP2 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 1369 None 2 5 0 FALSE 0 0 NA C coding 352 1056 348 1403 PB.6998.21 chr12 + 1445 12 novel_in_catalog PCBP2 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 1237 None 2 4 1 FALSE 0 0 NA C coding 308 924 348 1271 PB.6998.26 chr12 + 2830 13 novel_in_catalog PCBP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2623 None 2 10 0 FALSE 0 0 NA C coding 301 903 128 1030 PB.6998.27 chr12 + 2673 1 full-splice_match PCBP2-OT1 ENST00000634357.1 590 1 -2488 405 no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6998.24 chr12 + 1674 11 novel_in_catalog PCBP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1051 None 2 9 1 FALSE 0 0 NA C coding 301 903 338 1240 PB.7488.1 chr13 - 1735 1 genic_intron novelGene_489 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7795.3 chr14 + 2887 6 genic_intron novelGene_685 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2209 None 2 25 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.7795.2 chr14 + 3985 10 novel_in_catalog RBM25 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1054 None 2 15 0 FALSE 0 0 NA B coding 294 882 188 1069 PB.276.1 chr1 - 1597 6 full-splice_match FHL3 ENST00000373016.3 1647 6 55 -5 no_subtype FALSE canonical NA NA 94 None 2 6 0 FALSE 0 0 NA A coding 280 840 115 954 PB.3620.3 chr5 - 3341 12 full-splice_match CLINT1 ENST00000523908.5 2346 12 3 -998 no_subtype FALSE canonical NA NA 211 None 40 8 0 FALSE 0 0 NA C coding 643 1929 171 2099 PB.5186.3 chr8 - 963 6 full-splice_match RPL8 ENST00000394920.6 965 6 -1 3 no_subtype FALSE canonical NA NA 146 None 2 0 0 FALSE 0 0 NA C coding 257 771 158 928 PB.7795.4 chr14 + 2959 10 incomplete-splice_match RBM25 ENST00000528081.5 3008 18 1183 -1134 internal_fragment TRUE canonical NA NA 1308 None 4 11 0 FALSE 0 0 NA B coding 355 1065 334 1398 PB.2188.1 chr3 - 5123 27 novel_not_in_catalog USP19 novel NA NA NA NA no_subtype FALSE canonical NA NA 520 None 2 5 0 FALSE 0 0 NA A coding 1369 4107 657 4763 PB.7203.1 chr12 + 2561 15 full-splice_match HCFC2 ENST00000229330.8 5734 15 88 3085 no_subtype FALSE canonical NA NA 2080 None 8 6 0 FALSE 0 0 NA A coding 792 2376 17 2392 PB.1775.1 chr2 - 6054 2 genic_intron novelGene_1367 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4610 None 2 29 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9971.8 chr19 + 1631 7 novel_not_in_catalog ACTN4 novel NA NA NA NA no_subtype FALSE canonical NA NA 791 None 2 16 1 FALSE 0 0 NA B coding 242 726 222 947 PB.7474.1 chr13 + 1790 3 antisense novelGene_KIAA0226L_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 577 None 2 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9607.1 chr18 + 2708 1 full-splice_match TSHZ1 ENST00000584217.1 7080 1 3759 613 no_subtype FALSE canonical NA NA NA None 4 3 0 FALSE 0 0 NA A coding 659 1977 40 2016 PB.2009.1 chr3 - 507 5 novel_not_in_catalog RPL32 novel NA NA NA NA no_subtype FALSE canonical NA NA 48 None 2 0 0 FALSE 0 0 NA A coding 135 405 57 461 PB.9971.3 chr19 + 3489 22 novel_not_in_catalog ACTN4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2676 None 410 15 1 TRUE 0 0 NA B coding 912 2736 97 2832 PB.9971.2 chr19 + 702 8 full-splice_match EIF3K ENST00000248342.8 864 8 156 6 no_subtype FALSE canonical NA NA 641 None 4 0 0 FALSE 0 0 NA A coding 218 654 17 670 PB.9971.7 chr19 + 2989 4 genic_intron novelGene_383 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2682 None 2 28 1 FALSE 0 0 NA B coding 115 345 1499 1843 PB.9971.6 chr19 + 2995 5 genic_intron novelGene_383 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2688 None 3 26 0 FALSE 0 0 NA B coding 115 345 1505 1849 PB.1111.1 chr1 + 1282 6 full-splice_match ARV1 ENST00000310256.6 1335 6 43 10 no_subtype FALSE canonical NA NA 834 None 2 0 0 FALSE 0 0 NA A coding 271 813 15 827 PB.5266.3 chr9 + 2649 6 full-splice_match UBAP1 ENST00000625521.2 2029 6 45 -665 no_subtype FALSE canonical NA NA 1525 None 2 6 0 FALSE 0 0 NA C coding 401 1203 461 1663 PB.840.4 chr1 - 3973 1 novel_in_catalog CD247 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 7 14 0 FALSE 0 0 NA B coding 106 318 1225 1542 PB.5266.1 chr9 + 2611 7 full-splice_match UBAP1 ENST00000297661.8 2735 7 33 91 no_subtype FALSE canonical NA NA 1570 None 64 6 1 FALSE 0 0 NA C coding 502 1506 203 1708 PB.840.2 chr1 - 2934 7 novel_not_in_catalog CD247 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 199 None 4 11 0 FALSE 0 0 NA B coding 69 207 142 348 PB.7298.1 chr12 + 1659 4 novel_not_in_catalog HSPB8 novel NA NA NA NA no_subtype FALSE canonical NA NA 617 None 11 3 0 TRUE 0 0 NA A coding 196 588 187 774 PB.7118.1 chr12 - 1688 8 novel_not_in_catalog TSPAN8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 156 None 2 8 1 TRUE 0 0 NA B coding 171 513 294 806 PB.2899.1 chr4 - 2503 1 incomplete-splice_match CNOT6L ENST00000504123.5 8843 12 6339 2 no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.466.5 chr1 + 2822 1 genic_intron novelGene_804 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8355.1 chr16 - 2030 7 novel_not_in_catalog RPUSD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 131 None 6 4 0 TRUE 0 0 NA A coding 312 936 139 1074 PB.678.1 chr1 - 3161 10 novel_not_in_catalog POGZ novel NA NA NA NA no_subtype FALSE canonical NA NA 333 None 6 19 1 TRUE 0 0 NA C coding 363 1089 335 1423 PB.3716.1 chr6 - 1607 4 full-splice_match TUBB2A ENST00000333628.3 1595 4 -17 5 no_subtype FALSE canonical NA NA 137 None 65 2 0 FALSE 0 0 NA A coding 445 1335 81 1415 PB.678.3 chr1 - 3584 13 novel_not_in_catalog PI4KB novel NA NA NA NA no_subtype FALSE canonical NA NA 387 None 6 6 0 TRUE 0 0 NA C coding 816 2448 416 2863 PB.3795.14 chr6 + 2890 6 novel_not_in_catalog BTN3A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2599 None 2 20 0 TRUE 0 0 NA B coding 157 471 276 746 PB.678.5 chr1 - 3524 10 novel_not_in_catalog RFX5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 49 None 2 25 1 TRUE 0 0 NA C coding 628 1884 94 1977 PB.5872.1 chr10 - 3364 3 antisense novelGene_ZMIZ1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2233 None 2 17 2 FALSE 0 0 NA A coding 120 360 1208 1567 PB.678.6 chr1 - 3432 10 novel_in_catalog RFX5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 24 None 2 22 0 FALSE 0 0 NA C coding 616 1848 38 1885 PB.5545.4 chr9 + 7849 59 novel_not_in_catalog SPTAN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 7400 None 19 4 0 TRUE 0 0 NA B coding 2471 7413 111 7523 PB.9564.2 chr18 - 1454 10 novel_not_in_catalog ACAA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 114 None 2 1 1 TRUE 0 0 NA B coding 276 828 295 1122 PB.9564.1 chr18 - 1948 11 novel_not_in_catalog ACAA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 441 None 94 5 1 TRUE 0 0 NA B coding 397 1191 426 1616 PB.790.1 chr1 - 3180 1 antisense novelGene_VANGL2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 23 0 FALSE 0 0 NA A coding 104 312 601 912 PB.5545.1 chr9 + 7866 60 novel_not_in_catalog SPTAN1 novel NA NA NA NA no_subtype TRUE canonical NA NA 7421 None 2 5 0 TRUE 0 0 NA B coding 2477 7431 114 7544 PB.6281.1 chr11 - 3603 7 full-splice_match TRAF6 ENST00000526995.5 4627 7 3 1021 no_subtype FALSE canonical NA NA 222 None 23 15 0 FALSE 0 0 NA A coding 522 1566 245 1810 PB.9248.2 chr17 - 5702 9 full-splice_match TRIM25 ENST00000316881.8 5734 9 29 3 no_subtype TRUE canonical NA NA 618 None 9 12 0 FALSE 0 0 NA C coding 630 1890 22 1911 PB.9248.1 chr17 - 5489 2 novel_in_catalog TRIM25 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1175 None 6 17 0 FALSE 0 0 NA C coding 147 441 1262 1702 PB.9248.6 chr17 - 3189 1 novel_in_catalog TRIM25 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 9 8 0 FALSE 0 0 NA C coding 114 342 969 1310 PB.9945.1 chr19 - 1455 3 full-splice_match HSPB6 ENST00000004982.4 1458 3 0 3 no_subtype TRUE canonical NA NA 219 None 120 6 0 FALSE 0 0 NA A coding 160 480 22 501 PB.9248.4 chr17 - 5373 3 full-splice_match TRIM25 ENST00000574234.1 471 3 -710 -4192 no_subtype FALSE canonical NA NA 964 None 2 16 0 FALSE 0 0 NA C coding 147 441 1150 1590 PB.9248.5 chr17 - 2504 2 novel_in_catalog TRIM25 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 615 None 7 8 0 FALSE 0 0 NA C coding 256 768 19 786 PB.1581.1 chr2 - 3127 6 full-splice_match WDR33 ENST00000409658.7 3104 6 14 -37 no_subtype FALSE canonical NA NA 146 None 2 19 0 FALSE 0 0 NA C coding 326 978 170 1147 PB.7269.1 chr12 - 3017 1 novel_in_catalog HECTD4 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 14 0 FALSE 0 0 NA A coding 103 309 1807 2115 PB.5999.7 chr10 - 1772 2 antisense novelGene_WBP1L_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 30 None 2 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1779.2 chr2 - 3192 12 novel_not_in_catalog HSPD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1186 None 6 6 1 TRUE 0 0 NA C coding 357 1071 1665 2735 PB.9432.3 chr17 - 3819 9 full-splice_match FAAP100 ENST00000443656.6 3822 9 -12 15 no_subtype FALSE canonical NA NA 223 None 3 14 0 FALSE 0 0 NA C coding 730 2190 708 2897 PB.5790.1 chr10 - 2751 2 antisense novelGene_CISD1_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 881 None 2 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6082.1 chr10 + 1264 10 novel_not_in_catalog BCCIP novel NA NA NA NA no_subtype FALSE canonical NA NA 868 None 4 6 0 TRUE 0 0 NA C coding 323 969 16 984 PB.3299.1 chr5 - 2973 3 full-splice_match CD180 ENST00000256447.5 5388 3 59 2356 no_subtype FALSE canonical NA NA 189 None 16 8 0 FALSE 0 0 NA A coding 661 1983 100 2082 PB.7959.85 chr14 - 1518 9 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 83 None 2 12 4 TRUE 0 0 NA B coding 254 762 711 1472 PB.1350.1 chr2 + 6219 2 antisense novelGene_BCL11A_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5150 None 2 32 1 FALSE 0 0 NA B coding 105 315 5297 5611 PB.4053.1 chr6 - 1621 9 full-splice_match RTN4IP1 ENST00000369063.7 1682 9 51 10 no_subtype FALSE canonical NA NA 689 None 2 3 0 FALSE 0 0 NA A coding 396 1188 416 1603 PB.9477.5 chr18 + 3050 1 genic_intron novelGene_64 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9477.2 chr18 + 1591 8 novel_in_catalog ANKRD12 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1071 None 2 1 0 FALSE 0 0 NA B coding 464 1392 198 1589 PB.7837.1 chr14 - 2040 14 novel_not_in_catalog SPTLC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 220 None 5 5 0 TRUE 0 0 NA A coding 562 1686 89 1774 PB.5123.3 chr8 - 1847 12 full-splice_match FAM49B ENST00000519824.6 3798 12 70 1881 no_subtype FALSE canonical NA NA 155 None 2 2 0 FALSE 0 0 NA C coding 324 972 205 1176 PB.9477.1 chr18 + 1647 8 novel_in_catalog ANKRD12 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1182 None 5 4 0 FALSE 0 0 NA B coding 446 1338 309 1646 PB.5559.1 chr9 + 2165 8 full-splice_match DOLPP1 ENST00000372546.8 2177 8 11 1 no_subtype FALSE canonical NA NA 701 None 2 5 0 FALSE 0 0 NA A coding 238 714 22 735 PB.3092.3 chr4 + 1504 1 genic_intron novelGene_1250 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8234.1 chr15 - 5939 14 novel_not_in_catalog TBC1D2B novel NA NA NA NA no_subtype FALSE canonical NA NA 236 None 4 34 0 TRUE 0 0 NA A coding 837 2511 255 2765 PB.3760.1 chr6 - 2567 1 novel_in_catalog ATXN1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 8 23 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.646.1 chr1 - 2860 15 novel_not_in_catalog MTMR11 novel NA NA NA NA no_subtype FALSE canonical NA NA 197 None 2 6 1 FALSE 0 0 NA A coding 333 999 140 1138 PB.10735.2 chr22 + 5666 2 novel_not_in_catalog CSF2RB novel NA NA NA NA no_subtype FALSE canonical NA NA 744 None 3 25 1 TRUE 0 0 NA B coding 140 420 2188 2607 PB.10735.3 chr22 + 3688 7 incomplete-splice_match CSF2RB ENST00000403662.7 4863 14 1156 19 internal_fragment FALSE canonical NA NA 634 None 5 13 0 FALSE 0 0 NA B coding 558 1674 84 1757 PB.10735.1 chr22 + 6162 14 novel_not_in_catalog CSF2RB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3105 None 15 22 2 TRUE 0 0 NA B coding 456 1368 2861 4228 PB.10416.4 chr20 + 1846 15 novel_in_catalog CTSA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1397 None 10 5 1 FALSE 0 0 NA C coding 480 1440 39 1478 PB.6385.1 chr11 - 1896 3 novel_not_in_catalog LRRN4CL novel NA NA NA NA no_subtype FALSE canonical NA NA 104 None 6 13 1 TRUE 0 0 NA A coding 238 714 110 823 PB.1850.2 chr2 - 6118 19 incomplete-splice_match TNS1 ENST00000615025.4 6488 31 1025 -655 5prime_fragment FALSE canonical NA NA 46 None 3 17 0 FALSE 0 0 NA B coding 1401 4203 245 4447 PB.74.1 chr1 + 3650 10 full-splice_match DDI2 ENST00000480945.5 10625 10 -42 7017 no_subtype FALSE canonical NA NA 1459 None 2 3 0 FALSE 0 0 NA C coding 617 1851 1492 3342 PB.3128.2 chr4 + 3435 12 full-splice_match GALNT7 ENST00000265000.8 4307 12 30 842 no_subtype FALSE canonical NA NA 1889 None 15 2 0 FALSE 0 0 NA C coding 657 1971 54 2024 PB.7016.1 chr12 - 4119 26 novel_not_in_catalog ITGA7 novel NA NA NA NA no_subtype FALSE canonical NA NA 423 None 19 6 0 TRUE 0 0 NA A coding 1141 3423 218 3640 PB.1572.1 chr2 - 3344 11 novel_in_catalog CLASP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 106 None 19 15 0 FALSE 0 0 NA A coding 347 1041 392 1432 PB.38.1 chr1 + 2698 1 genic_intron novelGene_49 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11153.1 chrX - 2085 19 novel_not_in_catalog AIFM1 novel NA NA NA NA no_subtype TRUE canonical NA NA 164 None 12 1 0 TRUE 0 0 NA A coding 613 1839 59 1897 PB.6014.1 chr10 + 1427 4 full-splice_match SFR1 ENST00000369727.3 1438 4 7 4 no_subtype FALSE canonical NA NA 558 None 2 5 0 FALSE 0 0 NA A coding 245 735 13 747 PB.5798.4 chr10 + 2529 1 novel_in_catalog ARID5B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 7 16 0 FALSE 0 0 NA B coding 126 378 1362 1739 PB.5798.6 chr10 + 6249 2 incomplete-splice_match ARID5B ENST00000279873.11 7891 10 1636 6 internal_fragment FALSE canonical NA NA 172 None 4 17 0 FALSE 0 0 NA B coding 696 2088 251 2338 PB.6607.1 chr11 + 2629 10 full-splice_match BIRC3 ENST00000532808.5 4238 10 -78 1687 no_subtype FALSE canonical NA NA 1821 None 5 5 0 FALSE 0 0 NA C coding 604 1812 201 2012 PB.2573.2 chr3 + 2596 8 full-splice_match SEC62 ENST00000337002.8 6568 8 46 3926 no_subtype FALSE canonical NA NA 742 None 3 7 0 FALSE 0 0 NA C coding 399 1197 13 1209 PB.5798.1 chr10 + 1782 5 novel_in_catalog ARID5B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 749 None 2 3 0 FALSE 0 0 NA B coding 318 954 17 970 PB.5798.2 chr10 + 2965 8 novel_in_catalog ARID5B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1112 None 3 8 0 FALSE 0 0 NA B coding 400 1200 12 1211 PB.5798.3 chr10 + 1358 9 incomplete-splice_match ARID5B ENST00000279873.11 7891 10 399 6134 3prime_fragment FALSE canonical NA NA 1210 None 3 1 0 FALSE 0 0 NA B coding 449 1347 12 1358 PB.4980.1 chr8 + 3638 6 full-splice_match GDAP1 ENST00000220822.11 3666 6 18 10 no_subtype FALSE canonical NA NA 756 None 6 17 0 FALSE 0 0 NA A coding 358 1074 63 1136 PB.1850.1 chr2 - 3933 1 incomplete-splice_match TNS1 ENST00000171887.8 10331 33 6386 13 no_subtype FALSE canonical NA NA NA None 5 12 0 FALSE 0 0 NA B coding 184 552 137 688 PB.2885.1 chr4 - 1169 4 full-splice_match CXCL10 ENST00000306602.2 1176 4 0 7 no_subtype FALSE canonical NA NA 127 None 20 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3988.1 chr6 + 2083 1 genic_intron novelGene_682 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3768.2 chr6 - 1562 2 genic_intron novelGene_164 novel NA NA NA NA no_subtype FALSE canonical NA NA 636 None 2 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3768.1 chr6 - 5942 22 full-splice_match NUP153 ENST00000262077.2 5487 22 -547 92 no_subtype FALSE canonical NA NA 658 None 2 10 0 FALSE 0 0 NA C coding 1475 4425 548 4972 PB.4530.2 chr7 + 1714 7 novel_not_in_catalog ARPC1B novel NA NA NA NA no_subtype FALSE canonical NA NA 600 None 2 11 0 TRUE 0 0 NA B coding 236 708 101 808 PB.4530.1 chr7 + 1388 11 novel_not_in_catalog ARPC1B novel NA NA NA NA no_subtype FALSE canonical NA NA 1141 None 830 2 0 TRUE 0 0 NA B coding 352 1056 66 1121 PB.4530.6 chr7 + 1339 8 novel_not_in_catalog ARPC1B novel NA NA NA NA no_subtype FALSE canonical NA NA 765 None 10 7 0 TRUE 0 0 NA B coding 325 975 59 1033 PB.4530.4 chr7 + 1723 10 novel_not_in_catalog ARPC1B novel NA NA NA NA no_subtype FALSE canonical NA NA 1054 None 5 3 0 TRUE 0 0 NA B coding 385 1155 66 1220 PB.6898.2 chr12 + 5948 5 novel_not_in_catalog KIAA1551 novel NA NA NA NA no_subtype FALSE canonical NA NA 5229 None 3 16 2 TRUE 0 0 NA B coding 1154 3462 155 3616 PB.7117.1 chr12 - 1533 1 incomplete-splice_match PTPRB ENST00000334414.10 12316 34 7008 3776 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1378.1 chr2 - 5541 2 full-splice_match SERTAD2 ENST00000313349.3 5549 2 -5 13 no_subtype FALSE canonical NA NA 299 None 5 18 0 FALSE 0 0 NA A coding 314 942 304 1245 PB.4687.2 chr7 + 5419 3 novel_not_in_catalog TMEM140 novel NA NA NA NA no_subtype FALSE canonical NA NA 293 None 17 36 0 FALSE 0 0 NA C coding 225 675 198 872 PB.4687.3 chr7 + 2439 1 novel_in_catalog TMEM140 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 8 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.961.6 chr1 + 2004 9 full-splice_match ELF3 ENST00000367283.7 2044 9 38 2 no_subtype FALSE canonical NA NA 1205 None 4 6 0 FALSE 0 0 NA C coding 371 1113 205 1317 PB.4687.1 chr7 + 1698 2 full-splice_match TMEM140 ENST00000275767.3 1997 2 -25 324 no_subtype FALSE canonical NA NA 224 None 16 6 0 FALSE 0 0 NA C coding 185 555 249 803 PB.961.1 chr1 + 1884 9 full-splice_match ELF3 ENST00000367284.9 3179 9 108 1187 no_subtype FALSE canonical NA NA 1091 None 160 5 0 FALSE 0 0 NA C coding 371 1113 91 1203 PB.961.2 chr1 + 3223 6 novel_not_in_catalog ELF3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2429 None 3 10 1 TRUE 0 0 NA C coding 109 327 2215 2541 PB.961.3 chr1 + 3101 10 novel_not_in_catalog ELF3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2984 None 4 20 1 TRUE 0 0 NA C coding 371 1113 94 1206 PB.2228.1 chr3 + 1423 16 novel_not_in_catalog ACY1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1135 None 21 1 0 TRUE 0 0 NA B coding 408 1224 74 1297 PB.1898.2 chr2 + 3546 8 novel_not_in_catalog RHBDD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3486 None 2 17 1 TRUE 0 0 NA B coding 315 945 1265 2209 PB.3360.11 chr5 + 2899 7 novel_in_catalog VCAN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1566 None 5 1 0 FALSE 0 0 NA C coding 583 1749 48 1796 PB.2228.2 chr3 + 1536 14 novel_in_catalog ACY1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1131 None 2 3 0 FALSE 0 0 NA B coding 436 1308 131 1438 PB.8414.1 chr16 + 1673 6 full-splice_match HMOX2 ENST00000570646.5 2147 6 472 2 no_subtype FALSE canonical NA NA 956 None 32 2 1 FALSE 0 0 NA A coding 316 948 134 1081 PB.9950.1 chr19 + 1487 6 full-splice_match TBCB ENST00000221855.7 1473 6 -20 6 no_subtype FALSE canonical NA NA 1215 None 2 7 0 FALSE 0 0 NA A coding 244 732 596 1327 PB.4602.19 chr7 - 2542 1 genic_intron novelGene_967 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9292.1 chr17 - 1255 5 full-splice_match LIMD2 ENST00000259006.7 3193 5 19 1919 no_subtype FALSE canonical NA NA 90 None 10 2 0 FALSE 0 0 NA C coding 127 381 141 521 PB.4725.2 chr7 + 3475 12 novel_not_in_catalog ZYX novel NA NA NA NA no_subtype FALSE canonical NA NA 2945 None 7 9 1 TRUE 0 0 NA C coding 346 1038 111 1148 PB.6424.1 chr11 + 1587 10 full-splice_match TM7SF2 ENST00000279263.11 1722 10 1 134 no_subtype FALSE canonical NA NA 1257 None 2 3 0 FALSE 0 0 NA A coding 418 1254 162 1415 PB.4602.13 chr7 - 3048 23 novel_not_in_catalog SLC26A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 99 None 2 25 3 TRUE 0 0 NA C coding 764 2292 376 2667 PB.9930.1 chr19 + 1400 8 novel_not_in_catalog SCN1B novel NA NA NA NA no_subtype FALSE canonical NA NA 750 None 2 5 0 TRUE 0 0 NA A coding 218 654 89 742 PB.377.1 chr1 - 4515 18 full-splice_match NDC1 ENST00000371429.3 5134 18 600 19 no_subtype FALSE canonical NA NA 56 None 3 8 0 FALSE 0 0 NA A coding 559 1677 345 2021 PB.4602.10 chr7 - 2925 22 novel_not_in_catalog SLC26A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 110 None 7 9 0 FALSE 0 0 NA C coding 764 2292 252 2543 PB.4602.17 chr7 - 2009 17 incomplete-splice_match SLC26A3 ENST00000340010.9 2863 21 -13 867 internal_fragment FALSE canonical NA NA 110 None 2 7 0 FALSE 0 0 NA C coding 603 1809 199 2007 PB.4602.16 chr7 - 3867 18 novel_in_catalog SLC26A3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 110 None 5 14 0 FALSE 0 0 NA C coding 697 2091 199 2289 PB.4602.15 chr7 - 3107 23 novel_not_in_catalog SLC26A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 110 None 7 12 0 TRUE 0 0 NA C coding 764 2292 436 2727 PB.4602.14 chr7 - 2741 21 novel_not_in_catalog SLC26A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 110 None 5 6 1 TRUE 0 0 NA C coding 721 2163 199 2361 PB.7271.1 chr12 + 6104 16 full-splice_match PTPN11 ENST00000351677.6 6101 16 -7 4 no_subtype FALSE canonical NA NA 2019 None 17 18 0 FALSE 0 0 NA C coding 593 1779 206 1984 PB.7271.2 chr12 + 2864 1 genic PTPN11 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7855.2 chr14 - 3900 16 novel_not_in_catalog NRDE2 novel NA NA NA NA no_subtype FALSE canonical NA NA 194 None 12 3 1 TRUE 0 0 NA A coding 618 1854 131 1984 PB.5714.3 chr10 + 1419 1 genic_intron novelGene_256 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1657.1 chr2 + 3511 10 novel_in_catalog MARCH7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2223 None 32 11 1 FALSE 0 0 NA B coding 704 2112 168 2279 PB.6964.1 chr12 - 1987 10 full-splice_match CERS5 ENST00000317551.10 2051 10 61 3 no_subtype FALSE canonical NA NA 261 None 9 6 0 FALSE 0 0 NA A coding 392 1176 65 1240 PB.1464.2 chr2 - 3030 4 full-splice_match RNF103 ENST00000237455.4 3477 4 437 10 no_subtype FALSE canonical NA NA 758 None 2 7 0 FALSE 0 0 NA C coding 685 2055 533 2587 PB.5009.3 chr8 - 2076 13 novel_in_catalog NBN novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 143 None 2 6 1 FALSE 0 0 NA C coding 461 1383 543 1925 PB.10300.1 chr20 - 3766 11 full-splice_match NAPB ENST00000377026.4 3837 11 60 11 no_subtype FALSE canonical NA NA 124 None 8 20 0 FALSE 0 0 NA C coding 298 894 27 920 PB.5147.2 chr8 + 1270 3 novel_in_catalog LY6E novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 428 None 5 6 0 FALSE 0 0 NA C coding 131 393 257 649 PB.7209.1 chr12 - 1602 1 incomplete-splice_match SLC41A2 ENST00000258538.7 4449 10 2842 6 no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3745.1 chr6 + 3777 5 full-splice_match PHACTR1 ENST00000379335.7 943 5 66 -2900 no_subtype FALSE canonical NA NA 458 None 34 18 0 FALSE 0 0 NA A coding 144 432 40 471 PB.6389.9 chr11 - 1934 12 novel_not_in_catalog STX5 novel NA NA NA NA no_subtype FALSE canonical NA NA 128 None 2 5 1 FALSE 0 0 NA C coding 355 1065 297 1361 PB.2931.1 chr4 + 2876 2 genic_intron novelGene_772 novel NA NA NA NA no_subtype TRUE canonical NA NA 30 None 6 18 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7642.2 chr14 - 938 5 full-splice_match GZMH ENST00000216338.8 909 5 -42 13 no_subtype FALSE canonical NA NA 142 None 11 1 0 FALSE 0 0 NA C coding 246 738 88 825 PB.1168.1 chr1 + 2704 3 full-splice_match PGBD2 ENST00000329291.5 2136 3 1 -569 no_subtype FALSE canonical NA NA 163 None 6 7 0 FALSE 0 0 NA A coding 592 1776 147 1922 PB.7642.1 chr14 - 1514 5 novel_not_in_catalog GZMH novel NA NA NA NA no_subtype FALSE canonical NA NA 109 None 2 3 1 TRUE 0 0 NA C coding 181 543 388 930 PB.3601.1 chr5 + 4350 1 novel_in_catalog SAP30L novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 30 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.723.1 chr1 + 3842 8 full-splice_match HCN3 ENST00000368358.3 3718 8 -127 3 no_subtype FALSE canonical NA NA 1777 None 2 8 0 FALSE 0 0 NA A coding 774 2322 136 2457 PB.6201.1 chr11 - 2038 6 full-splice_match RNF141 ENST00000265981.6 4074 6 11 2025 no_subtype FALSE canonical NA NA 85 None 23 8 0 FALSE 0 0 NA A coding 230 690 133 822 PB.4037.1 chr6 + 1918 5 full-splice_match MANEA ENST00000358812.8 4575 5 -4 2661 no_subtype FALSE canonical NA NA 869 None 10 2 0 FALSE 0 0 NA A coding 462 1386 139 1524 PB.5484.1 chr9 + 1702 7 full-splice_match MRRF ENST00000344641.7 9826 7 238 7886 no_subtype FALSE canonical NA NA 784 None 9 6 0 FALSE 0 0 NA A coding 262 786 74 859 PB.7721.1 chr14 - 2079 5 genic_intron novelGene_537 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1772 None 6 20 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.4459.1 chr7 + 1744 13 full-splice_match LAT2 ENST00000344995.9 2363 13 610 9 no_subtype FALSE canonical NA NA 862 None 113 4 1 FALSE 0 0 NA C coding 243 729 113 841 PB.4459.2 chr7 + 2876 8 novel_in_catalog LAT2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2008 None 2 18 1 FALSE 0 0 NA C coding 154 462 1526 1987 PB.1806.1 chr2 + 2573 1 incomplete-splice_match FAM117B ENST00000392238.2 5763 8 3163 28 no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A coding 52 156 190 345 PB.7829.1 chr14 + 3014 4 novel_in_catalog GPATCH2L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 824 None 2 11 1 FALSE 0 0 NA B coding 304 912 98 1009 PB.9465.1 chr18 + 1673 2 antisense novelGene_YES1_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 1061 None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4902.1 chr8 - 2126 3 full-splice_match THAP1 ENST00000254250.7 2161 3 24 11 no_subtype FALSE canonical NA NA 278 None 3 15 0 FALSE 0 0 NA A coding 213 639 208 846 PB.4045.1 chr6 + 2856 2 antisense novelGene_CCNC_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 1085 None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3745.2 chr6 + 2515 1 antisense novelGene_TBC1D7_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11166.1 chrX + 3369 2 antisense novelGene_ZNF75D_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3093 None 4 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6712.6 chr11 + 2851 19 novel_not_in_catalog VWA5A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2638 None 2 4 1 TRUE 0 0 NA C coding 700 2100 159 2258 PB.5492.1 chr9 + 6953 1 antisense novelGene_STRBP_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 48 0 FALSE 0 0 NA A coding 105 315 3728 4042 PB.9410.6 chr17 - 3299 14 full-splice_match CYTH1 ENST00000446868.7 3311 14 -3 15 no_subtype FALSE canonical NA NA 96 None 93 8 0 FALSE 0 0 NA C coding 398 1194 75 1268 PB.6787.1 chr12 + 1824 8 full-splice_match COPS7A ENST00000229251.7 1721 8 -51 -52 no_subtype FALSE canonical NA NA 964 None 2 2 0 FALSE 0 0 NA C coding 275 825 177 1001 PB.10981.4 chrX + 2821 7 novel_not_in_catalog TSPYL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2059 None 4 10 1 TRUE 0 0 NA C coding 696 2088 133 2220 PB.6787.3 chr12 + 1937 7 novel_in_catalog COPS7A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 747 None 2 16 0 FALSE 0 0 NA C coding 263 789 112 900 PB.6787.2 chr12 + 1766 8 full-splice_match COPS7A ENST00000543155.5 2127 8 376 -15 no_subtype FALSE canonical NA NA 894 None 20 2 0 FALSE 0 0 NA C coding 275 825 107 931 PB.10981.1 chrX + 2812 7 full-splice_match TSPYL2 ENST00000375442.8 2815 7 0 3 no_subtype FALSE canonical NA NA 2050 None 41 7 0 FALSE 0 0 NA C coding 693 2079 133 2211 PB.10981.3 chrX + 2768 7 novel_in_catalog TSPYL2 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 2006 None 23 10 1 FALSE 0 0 NA C coding 390 1170 998 2167 PB.3790.1 chr6 + 1442 12 novel_not_in_catalog SCGN novel NA NA NA NA no_subtype FALSE canonical NA NA 1186 None 3 4 1 TRUE 0 0 NA A coding 276 828 186 1013 PB.7735.1 chr14 + 1442 17 novel_not_in_catalog ARID4A novel NA NA NA NA no_subtype FALSE canonical NA NA 1374 None 5 0 0 TRUE 0 0 NA B coding 413 1239 203 1441 PB.7735.2 chr14 + 1600 18 novel_not_in_catalog ARID4A novel NA NA NA NA no_subtype FALSE canonical NA NA 1567 None 7 0 0 TRUE 0 0 NA B coding 479 1437 164 1600 PB.4174.1 chr6 - 1595 1 antisense novelGene_PHACTR2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9659.1 chr19 - 1369 4 novel_not_in_catalog SLC39A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 106 None 6 2 1 FALSE 0 0 NA B coding 314 942 204 1145 PB.2369.1 chr3 + 3115 1 novel_in_catalog C3orf52 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 10 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7766.1 chr14 + 3121 1 novel_in_catalog FUT8 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2403.1 chr3 + 1752 11 full-splice_match PLA1A ENST00000273371.8 1786 11 38 -4 no_subtype TRUE canonical NA NA 1320 None 7 5 1 FALSE 0 0 NA A coding 456 1368 35 1402 PB.4474.2 chr7 - 2212 1 incomplete-splice_match FGL2 ENST00000248598.5 4261 2 1206 844 no_subtype FALSE canonical NA NA NA None 5 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7205.1 chr12 + 3571 15 full-splice_match TXNRD1 ENST00000503506.6 3930 15 356 3 no_subtype FALSE canonical NA NA 1649 None 89 15 0 FALSE 0 0 NA C coding 497 1491 219 1709 PB.2573.1 chr3 + 1934 9 novel_not_in_catalog SEC62 novel NA NA NA NA no_subtype FALSE canonical NA NA 706 None 7 3 0 TRUE 0 0 NA C coding 361 1083 91 1173 PB.7814.3 chr14 + 3285 3 novel_not_in_catalog FCF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3075 None 2 21 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.2569.1 chr3 - 3538 15 novel_not_in_catalog MECOM novel NA NA NA NA no_subtype FALSE canonical NA NA 75 None 5 1 0 FALSE 0 0 NA B coding 1114 3342 49 3390 PB.11034.2 chrX - 2627 1 genic_intron novelGene_697 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9166.1 chr17 - 1584 1 incomplete-splice_match UBTF ENST00000343638.9 4684 20 3098 3 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.787.6 chr1 - 3565 26 incomplete-splice_match COPA ENST00000241704.7 4789 33 887 337 5prime_fragment FALSE canonical NA NA 49 None 3 2 0 FALSE 0 0 NA C coding 991 2973 43 3015 PB.7814.2 chr14 + 1647 9 novel_not_in_catalog FCF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1315 None 6 16 1 TRUE 0 0 NA B coding 186 558 79 636 PB.1457.2 chr2 - 2631 14 novel_not_in_catalog IMMT novel NA NA NA NA no_subtype FALSE non_canonical NA NA 125 None 4 6 1 FALSE 0 0 NA B coding 494 1482 812 2293 PB.424.1 chr1 - 4250 4 full-splice_match GNG12 ENST00000370982.3 4404 4 21 133 no_subtype FALSE canonical NA NA 103 None 24 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.424.2 chr1 - 2984 1 incomplete-splice_match GNG12 ENST00000370982.3 4404 4 1294 127 no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.351.1 chr1 + 3035 1 antisense novelGene_EFCAB14_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10290.7 chr20 + 3016 2 genic_intron novelGene_189 novel NA NA NA NA no_subtype FALSE canonical NA NA 2909 None 9 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9405.1 chr17 + 2595 4 full-splice_match SYNGR2 ENST00000225777.7 2325 4 30 -300 no_subtype FALSE canonical NA NA 506 None 229 19 0 FALSE 0 0 NA A coding 224 672 30 701 PB.3762.1 chr6 - 1580 1 genic_intron novelGene_148 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6719.1 chr11 + 3665 13 full-splice_match PKNOX2 ENST00000298282.13 3687 13 19 3 no_subtype FALSE canonical NA NA 1444 None 3 12 0 FALSE 0 0 NA A coding 459 1377 292 1668 PB.9479.1 chr18 + 3646 6 novel_not_in_catalog TWSG1 novel NA NA NA NA no_subtype TRUE canonical NA NA 581 None 15 21 0 TRUE 0 0 NA A coding 223 669 92 760 PB.8743.1 chr16 - 2380 7 full-splice_match FA2H ENST00000219368.7 2424 7 31 13 no_subtype FALSE canonical NA NA 309 None 2 6 0 FALSE 0 0 NA C coding 372 1116 40 1155 PB.10846.1 chr22 - 1477 11 full-splice_match CHKB ENST00000406938.2 1638 11 141 20 no_subtype FALSE canonical NA NA 301 None 23 1 0 FALSE 0 0 NA A coding 395 1185 78 1262 PB.4445.1 chr7 - 1502 1 antisense novelGene_GTF2IP4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9856.1 chr19 + 2628 6 full-splice_match TMEM38A ENST00000187762.6 2649 6 12 9 no_subtype FALSE canonical NA NA 751 None 5 12 0 FALSE 0 0 NA A coding 299 897 80 976 PB.4854.1 chr8 + 2074 19 full-splice_match EPHX2 ENST00000521400.5 3140 19 417 649 no_subtype FALSE canonical NA NA 1602 None 12 13 1 FALSE 0 0 NA A coding 555 1665 14 1678 PB.7205.6 chr12 + 3495 15 novel_not_in_catalog TXNRD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1567 None 2 14 0 FALSE 0 0 NA C coding 497 1491 137 1627 PB.5034.1 chr8 + 1975 7 full-splice_match LAPTM4B ENST00000619747.1 2758 7 781 2 no_subtype TRUE canonical NA NA 775 None 9 8 0 FALSE 0 0 NA A coding 226 678 173 850 PB.5161.2 chr8 - 3627 10 novel_in_catalog PARP10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 50 None 2 7 0 FALSE 0 0 NA C coding 604 1812 58 1869 PB.7205.9 chr12 + 1387 1 full-splice_match EID3 ENST00000527879.2 1467 1 6 74 no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA A coding 331 993 197 1189 PB.5161.1 chr8 - 3444 11 full-splice_match PARP10 ENST00000313028.11 3497 11 33 20 no_subtype FALSE canonical NA NA 64 None 66 5 0 FALSE 0 0 NA C coding 1022 3066 72 3137 PB.1172.2 chr2 - 1688 10 novel_not_in_catalog TSSC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 205 None 48 3 0 TRUE 0 0 NA B coding 387 1161 164 1324 PB.1172.3 chr2 - 1592 9 novel_not_in_catalog TSSC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 193 None 2 2 0 TRUE 0 0 NA B coding 359 1077 152 1228 PB.9858.2 chr19 + 2586 2 genic_intron novelGene_155 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2526 None 2 12 1 FALSE 0 0 NA A coding 129 387 501 887 PB.1172.1 chr2 - 1671 9 novel_not_in_catalog TSSC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 192 None 3 6 1 FALSE 0 0 NA B coding 386 1158 151 1308 PB.4154.1 chr6 - 1942 3 full-splice_match PERP ENST00000421351.3 4290 3 62 2286 no_subtype FALSE canonical NA NA 323 None 16 7 0 FALSE 0 0 NA A coding 193 579 110 688 PB.3624.1 chr5 + 2162 11 full-splice_match UBLCP1 ENST00000296786.7 2392 11 219 11 no_subtype FALSE canonical NA NA 1036 None 5 6 1 FALSE 0 0 NA A coding 318 954 108 1061 PB.7133.1 chr12 + 1968 2 genic_intron novelGene_739 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1514 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9008.1 chr17 - 2651 11 novel_not_in_catalog FLOT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 180 None 2 7 0 FALSE 0 0 NA C coding 379 1137 288 1424 PB.9008.3 chr17 - 2562 11 full-splice_match FLOT2 ENST00000394908.8 2618 11 47 9 no_subtype FALSE canonical NA NA 107 None 230 4 0 FALSE 0 0 NA C coding 428 1284 59 1342 PB.949.5 chr1 - 2973 3 full-splice_match ZNF281 ENST00000367352.3 2933 3 -48 8 no_subtype FALSE canonical NA NA 95 None 2 12 2 FALSE 0 0 NA C coding 859 2577 114 2690 PB.949.3 chr1 - 3096 2 full-splice_match ZNF281 ENST00000294740.3 4891 2 -2 1797 no_subtype FALSE canonical NA NA 113 None 79 3 1 FALSE 0 0 NA C coding 895 2685 128 2812 PB.949.1 chr1 - 3299 1 novel_in_catalog ZNF281 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 3 0 FALSE 0 0 NA C coding 895 2685 327 3011 PB.5009.2 chr8 - 1466 8 novel_not_in_catalog NBN novel NA NA NA NA no_subtype FALSE canonical NA NA 184 None 25 3 1 FALSE 0 0 NA C coding 366 1098 225 1322 PB.8533.1 chr16 + 1985 13 novel_not_in_catalog SPNS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1643 None 4 2 0 FALSE 0 0 NA C coding 528 1584 152 1735 PB.8533.2 chr16 + 3089 12 novel_not_in_catalog SPNS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2753 None 2 9 0 FALSE 0 0 NA C coding 342 1026 1820 2845 PB.8522.17 chr16 - 3747 22 novel_in_catalog XPO6 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 22 None 2 3 0 FALSE 0 0 NA B coding 1051 3153 38 3190 PB.8522.10 chr16 - 3697 20 novel_not_in_catalog XPO6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 325 None 4 2 1 TRUE 0 0 NA B coding 837 2511 627 3137 PB.8522.13 chr16 - 3644 18 novel_in_catalog XPO6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 808 None 3 3 0 FALSE 0 0 NA B coding 774 2322 765 3086 PB.3080.2 chr4 - 3087 1 genic_intron novelGene_1237 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8156.1 chr15 - 2727 6 novel_in_catalog PARP16 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 632 None 17 7 0 FALSE 0 0 NA A coding 322 966 459 1424 PB.9844.2 chr19 + 1867 8 full-splice_match RAB8A ENST00000300935.7 2827 8 257 703 no_subtype FALSE canonical NA NA 547 None 119 6 0 FALSE 0 0 NA A coding 207 621 17 637 PB.3634.1 chr5 + 2089 15 novel_not_in_catalog RARS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1872 None 9 2 1 FALSE 0 0 NA B coding 422 1266 7 1272 PB.7469.1 chr13 - 3194 14 novel_in_catalog ZC3H13 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 325 None 3 2 0 FALSE 0 0 NA B coding 953 2859 335 3193 PB.4665.1 chr7 + 1083 1 genic_intron novelGene_1126 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6959.2 chr12 + 3926 9 novel_in_catalog TMBIM6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 699 None 4 23 0 FALSE 0 0 NA C coding 232 696 86 781 PB.8517.1 chr16 + 2829 9 full-splice_match IL21R ENST00000337929.7 4849 9 50 1970 no_subtype FALSE canonical NA NA 1290 None 12 7 0 FALSE 0 0 NA C coding 538 1614 424 2037 PB.1931.1 chr2 - 1964 2 full-splice_match MSL3P1 ENST00000438684.1 2032 2 56 12 no_subtype FALSE canonical NA NA 62 None 4 9 0 FALSE 0 0 NA A coding 356 1068 218 1285 PB.11075.1 chrX + 4454 14 novel_not_in_catalog CSTF2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1642 None 2 26 1 TRUE 0 0 NA C coding 399 1197 440 1636 PB.2984.4 chr4 - 1554 8 full-splice_match UBE2D3 ENST00000394801.8 2368 8 189 625 no_subtype FALSE canonical NA NA 168 None 10 1 0 FALSE 0 0 NA C coding 147 441 297 737 PB.5169.1 chr8 + 1700 13 novel_not_in_catalog MROH1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1242 None 3 5 0 TRUE 0 0 NA A coding 422 1266 98 1363 PB.8380.1 chr16 + 3658 21 full-splice_match TRAF7 ENST00000326181.10 3700 21 31 11 no_subtype TRUE canonical NA NA 2099 None 26 13 0 FALSE 0 0 NA A coding 670 2010 102 2111 PB.2236.2 chr3 + 3972 4 novel_in_catalog GLYCTK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 961 None 2 7 0 FALSE 0 0 NA C coding 523 1569 257 1825 PB.2984.3 chr4 - 1514 8 full-splice_match UBE2D3 ENST00000394803.9 2227 8 96 617 no_subtype FALSE canonical NA NA 120 None 10 1 0 FALSE 0 0 NA C coding 147 441 249 689 PB.4001.5 chr6 - 2873 24 novel_not_in_catalog PHIP novel NA NA NA NA no_subtype FALSE canonical NA NA 175 None 37 0 0 FALSE 0 0 NA B coding 530 1590 136 1725 PB.4478.1 chr7 + 3193 1 incomplete-splice_match RSBN1L ENST00000334955.12 6422 8 3225 5 no_subtype FALSE canonical NA NA NA None 10 23 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5611.1 chr9 + 3106 14 novel_not_in_catalog WDR5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1035 None 3 14 0 TRUE 0 0 NA A coding 334 1002 132 1133 PB.8201.1 chr15 - 3351 15 novel_not_in_catalog SEMA7A novel NA NA NA NA no_subtype FALSE canonical NA NA 218 None 6 11 0 TRUE 0 0 NA A coding 666 1998 41 2038 PB.8753.2 chr16 - 1999 14 full-splice_match KARS ENST00000302445.7 2005 14 23 -17 no_subtype FALSE canonical NA NA 79 None 31 2 0 FALSE 0 0 NA C coding 597 1791 18 1808 PB.8753.3 chr16 - 2168 15 full-splice_match KARS ENST00000319410.9 2421 15 -4 257 no_subtype FALSE canonical NA NA 92 None 5 4 0 FALSE 0 0 NA C coding 625 1875 127 2001 PB.7313.1 chr12 + 3076 18 novel_not_in_catalog RNF10 novel NA NA NA NA no_subtype FALSE canonical NA NA 2780 None 4 6 1 TRUE 0 0 NA C coding 811 2433 422 2854 PB.3629.2 chr5 - 1575 14 incomplete-splice_match SLU7 ENST00000297151.8 3793 16 277 1941 internal_fragment FALSE canonical NA NA 95 None 75 1 0 FALSE 0 0 NA B coding 488 1464 112 1575 PB.3629.1 chr5 - 3151 17 novel_not_in_catalog SLU7 novel NA NA NA NA no_subtype TRUE canonical NA NA 59 None 9 18 1 TRUE 0 0 NA B coding 586 1758 76 1833 PB.2233.1 chr3 - 1575 9 full-splice_match TWF2 ENST00000305533.9 1718 9 133 10 no_subtype FALSE canonical NA NA 136 None 150 0 0 FALSE 0 0 NA A coding 349 1047 112 1158 PB.5473.4 chr9 - 2729 1 incomplete-splice_match MEGF9 ENST00000373930.3 6298 6 2347 1223 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3908.3 chr6 - 2834 5 novel_not_in_catalog TREM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 92 None 3 14 1 TRUE 0 0 NA B coding 234 702 44 745 PB.4762.1 chr7 + 2713 14 novel_not_in_catalog GALNT11 novel NA NA NA NA no_subtype TRUE canonical NA NA 2280 None 10 11 1 TRUE 0 0 NA B coding 608 1824 249 2072 PB.5473.5 chr9 - 2793 7 novel_not_in_catalog MEGF9 novel NA NA NA NA no_subtype FALSE canonical NA NA 193 None 5 12 1 TRUE 0 0 NA B coding 600 1800 97 1896 PB.3093.10 chr4 - 1732 3 novel_in_catalog TMEM154 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 97 None 2 4 0 FALSE 0 0 NA C coding 111 333 1234 1566 PB.3908.4 chr6 - 3246 5 novel_not_in_catalog TREM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 94 None 24 13 1 TRUE 0 0 NA B coding 234 702 46 747 PB.10432.25 chr20 - 6389 4 genic_intron novelGene_484 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 325 None 2 51 3 FALSE 0 0 NA B coding 102 306 2449 2754 PB.4987.3 chr8 - 3306 1 full-splice_match THAP12P7 ENST00000520248.1 2290 1 -111 -905 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C coding 623 1869 312 2180 PB.7678.3 chr14 + 3814 12 novel_in_catalog PRPF39 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3074 None 2 10 0 FALSE 0 0 NA B coding 273 819 2310 3128 PB.10896.1 chrX - 1606 15 full-splice_match ACOT9 ENST00000336430.11 1675 15 66 3 no_subtype FALSE canonical NA NA 86 None 6 1 0 FALSE 0 0 NA C coding 439 1317 67 1383 PB.10896.2 chrX - 1673 16 full-splice_match ACOT9 ENST00000379303.9 3117 16 12 1432 no_subtype FALSE canonical NA NA 137 None 2 5 2 FALSE 0 0 NA C coding 448 1344 118 1461 PB.2973.1 chr4 - 1235 6 full-splice_match LAMTOR3 ENST00000515100.1 961 6 5 -279 no_subtype FALSE canonical NA NA 89 None 2 2 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.6545.1 chr11 + 2601 2 full-splice_match TSKU ENST00000333090.4 2712 2 88 23 no_subtype FALSE canonical NA NA 78 None 6 5 0 FALSE 0 0 NA A coding 353 1059 87 1145 PB.5675.11 chr10 + 1565 1 genic_intron novelGene_79 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 1 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2934.1 chr4 + 3387 2 novel_not_in_catalog AFF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1798 None 9 22 1 TRUE 0 0 NA B coding 102 306 462 767 PB.8467.1 chr16 + 3636 4 genic_intron novelGene_159 novel NA NA NA NA no_subtype FALSE canonical NA NA 2970 None 2 24 0 FALSE 0 0 NA A coding 142 426 3090 3515 PB.4470.1 chr7 + 773 3 full-splice_match HSPB1 ENST00000248553.6 909 3 129 7 no_subtype FALSE canonical NA NA 468 None 2 2 0 FALSE 0 0 NA A coding 205 615 41 655 PB.2478.1 chr3 - 2704 1 novel_in_catalog TOPBP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A coding 153 459 1697 2155 PB.2100.9 chr3 + 1475 1 incomplete-splice_match MYD88 ENST00000421516.1 2687 5 1206 7 no_subtype FALSE canonical NA NA NA None 4 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8870.1 chr17 - 1001 8 novel_not_in_catalog SPAG7 novel NA NA NA NA no_subtype TRUE canonical NA NA 98 None 3 2 0 TRUE 0 0 NA A coding 227 681 14 694 PB.1376.1 chr2 + 3774 9 novel_in_catalog AFTPH novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2655 None 60 4 0 FALSE 0 0 NA A coding 908 2724 77 2800 PB.1433.1 chr2 - 1415 13 novel_not_in_catalog AUP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 113 None 9 6 2 TRUE 0 0 NA C coding 281 843 426 1268 PB.4987.2 chr8 - 1676 7 novel_not_in_catalog IL7 novel NA NA NA NA no_subtype TRUE canonical NA NA 551 None 2 1 0 TRUE 0 0 NA B coding 126 378 639 1016 PB.4585.7 chr7 + 1568 1 genic_intron novelGene_953 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2100.1 chr3 + 2525 5 full-splice_match MYD88 ENST00000396334.7 2850 5 318 7 no_subtype FALSE canonical NA NA 641 None 244 9 0 FALSE 0 0 NA C coding 243 729 65 793 PB.2100.2 chr3 + 2668 5 full-splice_match MYD88 ENST00000396334.7 2850 5 162 20 no_subtype FALSE canonical NA NA 797 None 2 14 0 FALSE 0 0 NA C coding 309 927 23 949 PB.2100.3 chr3 + 2853 4 novel_in_catalog MYD88 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 968 None 5 9 0 FALSE 0 0 NA C coding 227 681 45 725 PB.2100.4 chr3 + 3241 3 novel_in_catalog MYD88 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1353 None 4 10 0 FALSE 0 0 NA C coding 185 555 2 556 PB.2100.5 chr3 + 3683 3 novel_in_catalog MYD88 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1799 None 2 14 0 FALSE 0 0 NA C coding 261 783 774 1556 PB.2100.6 chr3 + 2712 5 novel_not_in_catalog MYD88 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 831 None 2 17 1 FALSE 0 0 NA C coding 227 681 31 711 PB.2100.7 chr3 + 3468 4 novel_in_catalog MYD88 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1584 None 2 15 0 FALSE 0 0 NA C coding 330 990 747 1736 PB.7797.1 chr14 - 2663 3 antisense novelGene_PSEN1_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 475 None 3 20 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6021.1 chr10 - 2012 6 full-splice_match SMNDC1 ENST00000369603.9 4341 6 16 2313 no_subtype FALSE canonical NA NA 188 None 5 7 0 FALSE 0 0 NA C coding 238 714 189 902 PB.5675.16 chr10 + 1245 1 genic_intron novelGene_84 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6150.1 chr11 + 1727 6 full-splice_match PGAP2 ENST00000463452.6 931 6 3 -799 no_subtype FALSE canonical NA NA 714 None 4 5 0 FALSE 0 0 NA A coding 254 762 81 842 PB.4796.4 chr8 + 2926 13 novel_not_in_catalog BLK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2888 None 3 12 1 TRUE 0 0 NA C coding 454 1362 171 1532 PB.3591.2 chr5 + 5748 12 novel_not_in_catalog SLC36A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 5645 None 12 27 1 TRUE 0 0 NA B coding 476 1428 221 1648 PB.4796.1 chr8 + 5937 2 genic BLK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 626 None 2 26 1 TRUE 0 0 NA C coding 109 327 4574 4900 PB.6055.2 chr10 - 1567 12 full-splice_match TIAL1 ENST00000436547.6 1401 12 -149 -17 no_subtype FALSE canonical NA NA 226 None 18 0 0 FALSE 0 0 NA C coding 375 1125 195 1319 PB.4796.3 chr8 + 2568 13 full-splice_match BLK ENST00000259089.8 2606 13 30 8 no_subtype FALSE canonical NA NA 1874 None 2 6 0 FALSE 0 0 NA C coding 505 1515 563 2077 PB.4796.2 chr8 + 2558 14 novel_not_in_catalog BLK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2525 None 3 5 1 TRUE 0 0 NA C coding 505 1515 600 2114 PB.1485.1 chr2 + 3794 2 antisense novelGene_NEURL3_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 3369 None 2 10 0 FALSE 0 0 NA A coding 161 483 288 770 PB.826.1 chr1 + 3015 1 incomplete-splice_match PBX1 ENST00000612123.3 6062 6 1111 1937 no_subtype FALSE canonical NA NA NA None 11 7 0 FALSE 0 0 NA A coding 138 414 255 668 PB.7219.1 chr12 - 2992 13 full-splice_match CRY1 ENST00000008527.9 3267 13 263 12 no_subtype FALSE canonical NA NA 763 None 49 5 0 FALSE 0 0 NA A coding 586 1758 606 2363 PB.9791.1 chr19 - 3170 24 full-splice_match MAN2B1 ENST00000456935.6 3184 24 1 13 no_subtype TRUE canonical NA NA 199 None 333 4 0 FALSE 0 0 NA C coding 1011 3033 41 3073 PB.6878.1 chr12 - 2610 17 full-splice_match ASUN ENST00000261191.11 2974 17 343 21 no_subtype FALSE canonical NA NA 183 None 39 1 0 FALSE 0 0 NA A coding 706 2118 195 2312 PB.364.6 chr1 - 2844 2 novel_not_in_catalog NRDC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2763 None 5 11 1 TRUE 0 0 NA C coding 114 342 122 463 PB.5844.4 chr10 - 1624 6 novel_not_in_catalog MRPS16 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 65 None 8 11 2 TRUE 0 0 NA B coding 137 411 149 559 PB.10201.1 chr19 - 2808 1 antisense novelGene_ZNF274_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8072.2 chr15 - 2735 4 novel_in_catalog SECISBP2L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 199 None 2 12 0 FALSE 0 0 NA C coding 242 726 176 901 PB.3620.1 chr5 - 3489 13 novel_not_in_catalog CLINT1 novel NA NA NA NA no_subtype TRUE canonical NA NA 198 None 2 12 0 TRUE 0 0 NA C coding 625 1875 158 2032 PB.9030.1 chr17 + 2591 10 novel_not_in_catalog GOSR1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1189 None 10 7 0 TRUE 0 0 NA A coding 250 750 19 768 PB.2214.1 chr3 - 1681 3 full-splice_match TUSC2 ENST00000232496.4 1691 3 4 6 no_subtype FALSE canonical NA NA 286 None 39 3 0 FALSE 0 0 NA A coding 110 330 141 470 PB.10380.1 chr20 + 3311 22 full-splice_match DHX35 ENST00000252011.7 3325 22 9 5 no_subtype FALSE canonical NA NA 2091 None 2 6 0 FALSE 0 0 NA A coding 703 2109 25 2133 PB.3244.1 chr5 + 2750 1 incomplete-splice_match PARP8 ENST00000281631.9 7177 26 4418 10 no_subtype FALSE canonical NA NA NA None 14 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7011.1 chr12 - 1505 2 full-splice_match GPR84 ENST00000267015.3 1497 2 -12 4 no_subtype FALSE canonical NA NA 94 None 11 0 0 FALSE 0 0 NA A coding 396 1188 103 1290 PB.4987.4 chr8 - 1840 1 genic_intron novelGene_734 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5149.1 chr8 - 5284 9 novel_not_in_catalog ZC3H3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 76 None 2 35 5 TRUE 0 0 NA C coding 468 1404 31 1434 PB.5149.2 chr8 - 3243 12 full-splice_match ZC3H3 ENST00000262577.5 3280 12 22 15 no_subtype FALSE canonical NA NA 56 None 21 4 0 FALSE 0 0 NA C coding 948 2844 11 2854 PB.5149.3 chr8 - 3361 13 novel_not_in_catalog ZC3H3 novel NA NA NA NA no_subtype TRUE canonical NA NA 68 None 2 12 2 FALSE 0 0 NA C coding 930 2790 23 2812 PB.5002.1 chr8 - 4411 1 novel_in_catalog RMDN1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 50 0 FALSE 0 0 NA B coding 100 300 3356 3655 PB.1476.1 chr2 + 2936 2 genic_intron novelGene_865 novel NA NA NA NA no_subtype FALSE canonical NA NA 312 None 5 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9020.2 chr17 + 1440 7 full-splice_match TP53I13 ENST00000301057.7 1530 7 87 3 no_subtype FALSE canonical NA NA 1097 None 11 4 1 FALSE 0 0 NA C coding 368 1104 104 1207 PB.3697.1 chr5 - 1452 9 full-splice_match RNF130 ENST00000521389.5 2263 9 377 434 no_subtype FALSE canonical NA NA 286 None 40 4 0 FALSE 0 0 NA C coding 419 1257 40 1296 PB.9020.1 chr17 + 1570 8 novel_not_in_catalog TP53I13 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1227 None 3 2 0 FALSE 0 0 NA C coding 368 1104 234 1337 PB.4209.1 chr6 + 2601 5 incomplete-splice_match SCAF8 ENST00000367186.7 4908 22 2119 188 internal_fragment FALSE canonical NA NA 483 None 3 2 0 FALSE 0 0 NA B coding 632 1896 42 1937 PB.1029.1 chr1 + 2929 12 full-splice_match DIEXF ENST00000491415.6 8446 12 22 5495 no_subtype FALSE canonical NA NA 2062 None 21 7 0 FALSE 0 0 NA A coding 756 2268 36 2303 PB.6297.4 chr11 - 3768 1 genic_intron novelGene_454 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 33 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.130.2 chr1 - 2693 11 full-splice_match HNRNPR ENST00000302271.10 2629 11 -69 5 no_subtype FALSE canonical NA NA 121 None 66 2 0 FALSE 0 0 NA C coding 633 1899 131 2029 PB.8896.3 chr17 - 1638 9 novel_in_catalog GPS2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 44 None 2 6 1 FALSE 0 0 NA C coding 183 549 996 1544 PB.8896.1 chr17 - 1180 11 full-splice_match GPS2 ENST00000380728.6 1379 11 199 0 no_subtype FALSE canonical NA NA 35 None 6 1 0 FALSE 0 0 NA C coding 327 981 103 1083 PB.6870.1 chr12 + 2465 24 novel_not_in_catalog LRMP novel NA NA NA NA no_subtype FALSE canonical NA NA 1950 None 11 1 0 TRUE 0 0 NA B coding 499 1497 695 2191 PB.8896.4 chr17 - 1441 9 novel_in_catalog GPS2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 24 None 2 3 0 FALSE 0 0 NA C coding 135 405 92 496 PB.11171.2 chrX + 2280 6 full-splice_match FHL1 ENST00000370683.5 2565 6 275 10 no_subtype FALSE canonical NA NA 801 None 3 2 0 FALSE 0 0 NA C coding 280 840 114 953 PB.5540.1 chr9 + 1238 7 novel_not_in_catalog COQ4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 646 None 16 5 1 TRUE 0 0 NA B coding 241 723 93 815 PB.6126.1 chr11 + 3680 30 novel_not_in_catalog MUC2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3316 None 3 12 3 TRUE 0 0 NA B coding 917 2751 783 3533 PB.6126.2 chr11 + 3963 29 novel_not_in_catalog MUC2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3599 None 3 25 5 TRUE 0 0 NA B coding 917 2751 1066 3816 PB.6126.3 chr11 + 3883 28 novel_not_in_catalog MUC2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3519 None 2 26 4 TRUE 0 0 NA B coding 748 2244 1493 3736 PB.6126.4 chr11 + 3343 23 novel_not_in_catalog MUC2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2979 None 11 7 2 TRUE 0 0 NA B coding 748 2244 953 3196 PB.6126.5 chr11 + 3335 21 novel_not_in_catalog MUC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2971 None 3 7 0 TRUE 0 0 NA B coding 933 2799 390 3188 PB.6126.6 chr11 + 2833 23 novel_not_in_catalog MUC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2469 None 47 6 3 TRUE 0 0 NA B coding 748 2244 443 2686 PB.6126.7 chr11 + 3292 20 incomplete-splice_match MUC2 ENST00000361558.7 12667 49 9363 12 internal_fragment FALSE canonical NA NA 2928 None 6 9 0 FALSE 0 0 NA B coding 1042 3126 20 3145 PB.9698.1 chr19 + 2779 21 full-splice_match SAFB ENST00000592224.5 3014 21 230 5 no_subtype FALSE canonical NA NA 2479 None 88 3 0 FALSE 0 0 NA C coding 859 2577 30 2606 PB.7594.1 chr14 + 1450 5 full-splice_match APEX1 ENST00000216714.7 1484 5 31 3 no_subtype FALSE canonical NA NA 676 None 24 1 0 FALSE 0 0 NA C coding 318 954 238 1191 PB.7594.2 chr14 + 1328 5 novel_not_in_catalog APEX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 553 None 4 3 0 FALSE 0 0 NA C coding 318 954 115 1068 PB.9698.2 chr19 + 3046 21 novel_in_catalog SAFB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2732 None 27 3 0 FALSE 0 0 NA C coding 914 2742 118 2859 PB.7594.4 chr14 + 1334 5 novel_not_in_catalog APEX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 559 None 2 2 0 FALSE 0 0 NA C coding 318 954 121 1074 PB.7594.5 chr14 + 1367 6 novel_not_in_catalog APEX1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 593 None 2 5 2 TRUE 0 0 NA C coding 318 954 155 1108 PB.4034.3 chr6 - 3807 1 genic_intron novelGene_823 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.410.1 chr1 + 2367 11 full-splice_match PGM1 ENST00000371084.7 2472 11 101 4 no_subtype FALSE canonical NA NA 1711 None 2 4 0 FALSE 0 0 NA C coding 562 1686 113 1798 PB.7476.1 chr13 + 2988 19 full-splice_match LRCH1 ENST00000311191.10 4710 19 -3 1725 no_subtype FALSE canonical NA NA 2212 None 3 12 0 FALSE 0 0 NA A coding 696 2088 233 2320 PB.7261.1 chr12 - 3994 12 full-splice_match BRAP ENST00000419234.8 4026 12 16 16 no_subtype FALSE canonical NA NA 260 None 11 8 0 FALSE 0 0 NA A coding 592 1776 179 1954 PB.2315.1 chr3 + 1218 6 full-splice_match CHMP2B ENST00000263780.8 2557 6 49 1290 no_subtype FALSE canonical NA NA 720 None 12 0 0 FALSE 0 0 NA A coding 213 639 190 828 PB.5340.1 chr9 - 2857 22 novel_not_in_catalog TLE1 novel NA NA NA NA no_subtype TRUE canonical NA NA 59 None 2 9 0 TRUE 0 0 NA A coding 770 2310 36 2345 PB.283.4 chr1 + 4115 25 novel_not_in_catalog MACF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3584 None 2 6 1 TRUE 0 0 NA B coding 1264 3792 47 3838 PB.283.3 chr1 + 3777 25 incomplete-splice_match MACF1 ENST00000372925.6 14496 71 8187 2532 internal_fragment FALSE canonical NA NA 3721 None 2 1 0 FALSE 0 0 NA B coding 1248 3744 32 3775 PB.283.1 chr1 + 6605 39 novel_in_catalog MACF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 6075 None 2 5 0 FALSE 0 0 NA B coding 2095 6285 45 6329 PB.8628.13 chr16 + 3174 3 novel_in_catalog NLRC5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 419 None 2 25 0 FALSE 0 0 NA B coding 130 390 125 514 PB.8628.12 chr16 + 6844 49 novel_not_in_catalog NLRC5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5754 None 3 6 1 FALSE 0 0 NA B coding 1128 3384 129 3512 PB.6846.1 chr12 - 3679 27 full-splice_match GUCY2C ENST00000261170.4 3844 27 102 63 no_subtype FALSE canonical NA NA 252 None 21 5 0 FALSE 0 0 NA A coding 1073 3219 36 3254 PB.8628.16 chr16 + 1908 1 novel_in_catalog NLRC5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 12 0 FALSE 0 0 NA B coding 99 297 562 858 PB.8628.15 chr16 + 6592 47 novel_in_catalog NLRC5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5502 None 2 2 1 FALSE 0 0 NA B coding 1866 5598 14 5611 PB.8628.14 chr16 + 7015 48 novel_not_in_catalog NLRC5 novel NA NA NA NA no_subtype FALSE canonical NA NA 5925 None 3 16 0 FALSE 0 0 NA B coding 1073 3219 125 3343 PB.8628.19 chr16 + 3578 31 novel_in_catalog NLRC5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2488 None 2 2 0 FALSE 0 0 NA B coding 781 2343 255 2597 PB.6188.1 chr11 - 1534 5 full-splice_match TMEM9B ENST00000534025.5 2083 5 331 218 no_subtype FALSE canonical NA NA 234 None 73 8 0 FALSE 0 0 NA C coding 198 594 130 723 PB.6188.2 chr11 - 1655 4 full-splice_match TMEM9B ENST00000309134.9 1659 4 1 3 no_subtype FALSE canonical NA NA 232 None 6 9 0 FALSE 0 0 NA C coding 124 372 258 629 PB.7297.1 chr12 + 2678 12 full-splice_match SUDS3 ENST00000543473.1 4897 12 177 2042 no_subtype FALSE canonical NA NA 1023 None 9 15 0 FALSE 0 0 NA C coding 328 984 136 1119 PB.1503.2 chr2 - 3631 1 novel_in_catalog MITD1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5507.3 chr9 - 2634 7 novel_in_catalog HSPA5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 351 None 4 5 0 FALSE 0 0 NA C coding 392 1176 1105 2280 PB.1503.1 chr2 + 2728 3 antisense novelGene_MITD1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 381 None 3 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3137.2 chr4 - 1755 1 novel_in_catalog DCTD novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7297.2 chr12 + 4412 13 novel_not_in_catalog SUDS3 novel NA NA NA NA no_subtype FALSE canonical NA NA 3626 None 3 27 0 TRUE 0 0 NA C coding 328 984 146 1129 PB.2186.1 chr3 - 3028 10 novel_not_in_catalog QRICH1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 147 None 38 6 0 TRUE 0 0 NA A coding 776 2328 168 2495 PB.9533.1 chr18 + 3056 2 genic_intron novelGene_347 novel NA NA NA NA no_subtype FALSE canonical NA NA 2753 None 2 21 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.433.1 chr1 - 2786 10 full-splice_match ZRANB2 ENST00000370920.7 3078 10 240 52 no_subtype FALSE canonical NA NA 118 None 98 7 0 FALSE 0 0 NA C coding 330 990 63 1052 PB.1680.2 chr2 - 3552 1 antisense novelGene_DHRS9_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 27 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6901.1 chr12 - 1604 5 full-splice_match YARS2 ENST00000324868.12 2122 5 11 507 no_subtype FALSE canonical NA NA 796 None 9 3 0 FALSE 0 0 NA A coding 477 1431 18 1448 PB.1680.1 chr2 - 5691 2 antisense novelGene_DHRS9_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 4495 None 3 35 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4068.1 chr6 + 2917 1 genic_intron novelGene_981 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7703.1 chr14 + 2925 2 full-splice_match PTGDR ENST00000306051.2 2942 2 11 6 no_subtype FALSE canonical NA NA 937 None 14 15 0 FALSE 0 0 NA A coding 359 1077 92 1168 PB.1635.1 chr2 - 1505 14 full-splice_match ORC4 ENST00000392857.9 6530 14 27 4998 no_subtype FALSE canonical NA NA 64 None 5 1 0 FALSE 0 0 NA A coding 436 1308 82 1389 PB.1035.1 chr1 - 1389 1 incomplete-splice_match LPGAT1 ENST00000366997.8 7782 8 4866 1528 no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6686.11 chr11 + 2730 9 novel_in_catalog HINFP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1767 None 2 12 0 FALSE 0 0 NA B coding 311 933 1247 2179 PB.6686.10 chr11 + 2760 9 novel_not_in_catalog HINFP novel NA NA NA NA no_subtype FALSE canonical NA NA 1791 None 2 8 1 FALSE 0 0 NA B coding 311 933 1271 2203 PB.6686.13 chr11 + 3633 10 novel_in_catalog NLRX1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2742 None 14 2 0 FALSE 0 0 NA A coding 975 2925 137 3061 PB.6686.12 chr11 + 3522 15 novel_in_catalog ABCG4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1755 None 2 6 0 FALSE 0 0 NA A coding 646 1938 41 1978 PB.5540.2 chr9 + 1511 8 novel_not_in_catalog COQ4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 917 None 3 7 2 TRUE 0 0 NA B coding 241 723 364 1086 PB.3345.6 chr5 + 1358 2 genic_intron novelGene_742 novel NA NA NA NA no_subtype FALSE canonical NA NA 146 None 2 8 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1910.8 chr2 + 2777 5 novel_not_in_catalog CAB39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 849 None 3 16 1 TRUE 0 0 NA B coding 96 288 148 435 PB.389.1 chr1 - 2897 9 genic_intron novelGene_533 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1212 None 4 24 4 FALSE 0 0 NA B non_coding NA NA NA NA PB.938.1 chr1 + 3564 1 novel_in_catalog TROVE2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 34 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5974.1 chr10 + 3985 16 novel_in_catalog SEMA4G novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2861 None 6 6 0 FALSE 0 0 NA B coding 843 2529 104 2632 PB.7479.1 chr13 + 1852 4 novel_not_in_catalog NUDT15 novel NA NA NA NA no_subtype FALSE canonical NA NA 1278 None 3 12 1 TRUE 0 0 NA A coding 68 204 246 449 PB.1101.1 chr1 + 1450 8 full-splice_match RAB4A ENST00000366690.4 2966 8 35 1481 no_subtype FALSE canonical NA NA 842 None 13 5 0 FALSE 0 0 NA C coding 218 654 174 827 PB.4275.1 chr7 - 5584 25 full-splice_match CARD11 ENST00000396946.8 4366 25 70 -1288 no_subtype FALSE canonical NA NA 209 None 4 7 0 FALSE 0 0 NA C coding 1154 3462 335 3796 PB.6579.1 chr11 + 2785 11 novel_in_catalog EED novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2448 None 2 4 0 FALSE 0 0 NA C coding 384 1152 471 1622 PB.4275.3 chr7 - 4239 25 novel_in_catalog CARD11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 160 None 11 4 0 FALSE 0 0 NA C coding 1154 3462 286 3747 PB.4275.2 chr7 - 5572 26 novel_not_in_catalog CARD11 novel NA NA NA NA no_subtype TRUE canonical NA NA 197 None 2 16 0 FALSE 0 0 NA C coding 1154 3462 323 3784 PB.6579.4 chr11 + 1583 13 full-splice_match EED ENST00000351625.10 1696 13 33 80 no_subtype FALSE canonical NA NA 1248 None 2 14 2 FALSE 0 0 NA C coding 452 1356 17 1372 PB.6579.5 chr11 + 1397 11 novel_in_catalog EED novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1060 None 2 0 0 FALSE 0 0 NA C coding 290 870 10 879 PB.4886.1 chr8 + 1998 2 antisense novelGene_CTD-2544N14.3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 60 None 5 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.266.53 chr1 - 3249 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 103 None 2 12 2 TRUE 0 0 NA C coding 836 2508 480 2987 PB.4886.2 chr8 + 1648 1 incomplete-splice_match PLEKHA2 ENST00000617275.4 5582 12 3933 2 no_subtype FALSE canonical NA NA NA None 3 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.266.56 chr1 - 3357 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 29 None 2 8 2 FALSE 0 0 NA C coding 608 1824 410 2233 PB.266.54 chr1 - 2773 16 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 2 4 2 TRUE 0 0 NA C coding 776 2328 184 2511 PB.266.55 chr1 - 3351 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 250 None 2 11 1 TRUE 0 0 NA C coding 836 2508 582 3089 PB.8652.1 chr16 + 1486 9 full-splice_match SETD6 ENST00000310682.6 2042 9 45 511 no_subtype FALSE canonical NA NA 1058 None 3 4 0 FALSE 0 0 NA A coding 449 1347 15 1361 PB.266.58 chr1 - 3326 19 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 3 4 1 FALSE 0 0 NA C coding 704 2112 953 3064 PB.9707.1 chr19 - 2435 13 full-splice_match GTF2F1 ENST00000394456.9 2731 13 296 0 no_subtype FALSE canonical NA NA 181 None 9 12 0 FALSE 0 0 NA A coding 489 1467 254 1720 PB.1910.2 chr2 + 3528 10 novel_not_in_catalog CAB39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1602 None 2 18 1 TRUE 0 0 NA B coding 341 1023 166 1188 PB.3274.1 chr5 + 3224 2 genic_intron novelGene_570 novel NA NA NA NA no_subtype TRUE canonical NA NA 49 None 2 22 0 FALSE 0 0 NA A coding 108 324 1083 1406 PB.6308.1 chr11 + 1720 10 full-splice_match DDB2 ENST00000256996.8 1870 10 125 25 no_subtype FALSE canonical NA NA 1304 None 6 6 0 FALSE 0 0 NA A coding 427 1281 71 1351 PB.1221.1 chr2 + 1777 1 antisense novelGene_DTNB_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA A coding 72 216 155 370 PB.3482.2 chr5 - 2591 6 novel_in_catalog PPP2CA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 314 None 2 6 0 FALSE 0 0 NA C coding 170 510 213 722 PB.3482.3 chr5 - 3075 5 novel_in_catalog PPP2CA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 317 None 2 8 0 FALSE 0 0 NA C coding 170 510 216 725 PB.10693.6 chr22 - 2603 19 novel_in_catalog ASCC2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 77 None 2 8 1 FALSE 0 0 NA C coding 704 2112 95 2206 PB.10693.5 chr22 - 2686 19 novel_in_catalog ASCC2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 96 None 2 3 1 FALSE 0 0 NA C coding 643 1929 358 2286 PB.3664.8 chr5 - 3088 20 novel_not_in_catalog HK3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 26 None 4 1 0 TRUE 0 0 NA B coding 923 2769 126 2894 PB.3829.1 chr6 + 2586 18 full-splice_match C2 ENST00000299367.9 2850 18 260 4 no_subtype FALSE canonical NA NA 2095 None 108 0 0 FALSE 0 0 NA A coding 752 2256 17 2272 PB.7258.1 chr12 + 2500 1 genic_intron novelGene_993 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA A coding 130 390 626 1015 PB.7992.1 chr15 + 5766 22 full-splice_match THBS1 ENST00000260356.5 7775 22 -9 2018 no_subtype FALSE canonical NA NA 3679 None 4 14 0 FALSE 0 0 NA A coding 1170 3510 175 3684 PB.3689.1 chr5 + 5423 5 full-splice_match ZNF354C ENST00000315475.6 5411 5 -27 15 no_subtype FALSE canonical NA NA 583 None 2 44 1 FALSE 0 0 NA A coding 554 1662 334 1995 PB.10898.1 chrX - 1620 1 antisense novelGene_SAT1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3503.1 chr5 + 3269 20 novel_not_in_catalog KIF20A novel NA NA NA NA no_subtype FALSE canonical NA NA 3224 None 6 2 1 TRUE 0 0 NA C coding 890 2670 81 2750 PB.3503.2 chr5 + 2997 19 full-splice_match KIF20A ENST00000394894.7 3201 19 146 58 no_subtype FALSE canonical NA NA 2435 None 16 2 0 FALSE 0 0 NA C coding 890 2670 81 2750 PB.7428.3 chr13 - 1708 4 genic_intron novelGene_320 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 50 None 2 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1825.6 chr2 + 1069 2 genic_intron novelGene_1390 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 977 None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3166.1 chr5 - 1046 4 full-splice_match MED10 ENST00000255764.3 1141 4 46 49 no_subtype FALSE canonical NA NA 187 None 4 6 0 FALSE 0 0 NA A coding 135 405 66 470 PB.1481.10 chr2 - 6874 47 novel_not_in_catalog SNRNP200 novel NA NA NA NA no_subtype FALSE canonical NA NA 58 None 38 5 1 TRUE 0 0 NA B coding 2136 6408 192 6599 PB.3968.1 chr6 + 2815 13 novel_not_in_catalog FBXO9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2410 None 17 12 1 TRUE 0 0 NA B coding 205 615 707 1321 PB.3968.3 chr6 + 3012 14 novel_not_in_catalog FBXO9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1752 None 7 3 1 TRUE 0 0 NA B coding 327 981 690 1670 PB.3968.2 chr6 + 1408 11 novel_not_in_catalog FBXO9 novel NA NA NA NA no_subtype FALSE canonical NA NA 1330 None 20 1 1 FALSE 0 0 NA B coding 235 705 702 1406 PB.3968.5 chr6 + 2980 12 novel_not_in_catalog FBXO9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2592 None 7 14 1 TRUE 0 0 NA B coding 161 483 703 1185 PB.4872.1 chr8 + 3912 12 full-splice_match ERLIN2 ENST00000276461.9 6073 12 -20 2181 no_subtype FALSE canonical NA NA 906 None 10 13 0 FALSE 0 0 NA A coding 339 1017 88 1104 PB.3182.1 chr5 - 1064 4 full-splice_match DAP ENST00000230895.10 2339 4 26 1249 no_subtype FALSE canonical NA NA 233 None 2 3 0 FALSE 0 0 NA A coding 102 306 179 484 PB.2668.2 chr3 + 1542 1 incomplete-splice_match IL1RAP ENST00000342550.6 4490 10 2947 2 no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1412.1 chr2 + 7109 60 novel_not_in_catalog DYSF novel NA NA NA NA no_subtype TRUE canonical NA NA 6802 None 4 1 0 TRUE 0 0 NA B coding 2132 6396 443 6838 PB.6372.2 chr11 - 947 4 full-splice_match FTH1 ENST00000273550.11 1229 4 -3 285 no_subtype FALSE canonical NA NA 352 None 75 1 0 FALSE 0 0 NA A coding 183 549 239 787 PB.10135.4 chr19 + 2649 2 novel_not_in_catalog SIGLEC9 novel NA NA NA NA no_subtype FALSE canonical NA NA 1913 None 3 18 1 TRUE 0 0 NA B coding 198 594 66 659 PB.10135.5 chr19 + 1515 7 full-splice_match CD33 ENST00000262262.4 1444 7 -75 4 no_subtype FALSE canonical NA NA 1020 None 3 2 0 FALSE 0 0 NA A coding 364 1092 97 1188 PB.8691.1 chr16 + 3757 10 full-splice_match NFATC3 ENST00000346183.7 6040 10 -80 2363 no_subtype FALSE canonical NA NA 3210 None 27 5 0 FALSE 0 0 NA C coding 1075 3225 105 3329 PB.7115.2 chr12 + 2820 16 full-splice_match CNOT2 ENST00000229195.7 3282 16 460 2 no_subtype FALSE canonical NA NA 1658 None 50 4 0 FALSE 0 0 NA A coding 540 1620 123 1742 PB.4312.1 chr7 - 6361 27 novel_not_in_catalog SNX13 novel NA NA NA NA no_subtype TRUE canonical NA NA 220 None 4 15 0 TRUE 0 0 NA C coding 957 2871 209 3079 PB.10135.1 chr19 + 2927 8 novel_not_in_catalog SIGLEC9 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1557 None 13 10 1 TRUE 0 0 NA B coding 461 1383 66 1448 PB.10135.2 chr19 + 2799 7 novel_not_in_catalog SIGLEC9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1433 None 11 10 1 TRUE 0 0 NA B coding 369 1107 39 1145 PB.4312.2 chr7 - 3698 26 full-splice_match SNX13 ENST00000428135.7 6357 26 -14 2673 no_subtype FALSE canonical NA NA 225 None 6 2 0 FALSE 0 0 NA C coding 957 2871 214 3084 PB.5320.1 chr9 - 6079 24 novel_not_in_catalog TMEM2 novel NA NA NA NA no_subtype TRUE canonical NA NA 90 None 2 23 1 FALSE 0 0 NA C coding 1383 4149 103 4251 PB.6997.1 chr12 + 1082 4 full-splice_match PRR13 ENST00000429243.6 1229 4 146 1 no_subtype FALSE canonical NA NA 464 None 32 5 1 FALSE 0 0 NA C coding 148 444 63 506 PB.6997.2 chr12 + 1266 2 novel_in_catalog PRR13 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 643 None 4 6 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.6997.3 chr12 + 1739 3 novel_in_catalog PRR13 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1122 None 2 11 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.7758.12 chr14 + 2554 2 incomplete-splice_match PLEKHG3 ENST00000484731.2 3001 4 445 2 internal_fragment FALSE canonical NA NA 1192 None 6 2 0 FALSE 0 0 NA B coding 637 1911 1 1911 PB.1106.1 chr1 - 3039 5 novel_not_in_catalog TAF5L novel NA NA NA NA no_subtype FALSE canonical NA NA 91 None 4 2 0 FALSE 0 0 NA C coding 589 1767 95 1861 PB.2591.11 chr3 + 2841 3 genic_intron novelGene_1321 novel NA NA NA NA no_subtype FALSE canonical NA NA 2635 None 2 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3581.1 chr5 - 2277 11 full-splice_match RBM22 ENST00000199814.8 2342 11 64 1 no_subtype FALSE canonical NA NA 112 None 8 9 0 FALSE 0 0 NA A coding 420 1260 59 1318 PB.299.2 chr1 + 3224 19 novel_not_in_catalog CTPS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2322 None 2 13 2 TRUE 0 0 NA C coding 591 1773 538 2310 PB.299.1 chr1 + 2794 19 full-splice_match CTPS1 ENST00000372621.8 3201 19 387 20 no_subtype FALSE canonical NA NA 1906 None 39 7 1 FALSE 0 0 NA C coding 591 1773 122 1894 PB.7331.2 chr12 - 2606 7 novel_not_in_catalog RHOF novel NA NA NA NA no_subtype FALSE non_canonical NA NA 485 None 3 13 2 TRUE 0 0 NA B coding 211 633 348 980 PB.7575.2 chr13 - 3843 5 novel_in_catalog ANKRD10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 303 None 5 29 0 FALSE 0 0 NA C coding 316 948 94 1041 PB.9484.1 chr18 + 1459 1 incomplete-splice_match RAB31 ENST00000578921.5 4055 7 2593 4 no_subtype FALSE canonical NA NA NA None 7 5 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1110.2 chr1 - 3237 24 novel_not_in_catalog TTC13 novel NA NA NA NA no_subtype FALSE canonical NA NA 272 None 4 12 0 TRUE 0 0 NA B coding 860 2580 2 2581 PB.5364.2 chr9 - 2798 16 novel_not_in_catalog SPTLC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 72 None 4 6 0 FALSE 0 0 NA C coding 488 1464 16 1479 PB.6657.1 chr11 - 3835 22 novel_not_in_catalog PCSK7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 52 None 2 13 4 TRUE 0 0 NA B coding 785 2355 323 2677 PB.2565.2 chr3 + 1480 1 incomplete-splice_match NMD3 ENST00000351193.6 3049 16 1554 16 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6346.4 chr11 + 2997 15 novel_not_in_catalog STX3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1072 None 2 13 2 TRUE 0 0 NA B coding 289 867 200 1066 PB.1825.4 chr2 + 5835 9 novel_in_catalog CREB1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1568 None 2 32 0 FALSE 0 0 NA C coding 325 975 166 1140 PB.7090.2 chr12 - 2669 1 incomplete-splice_match GNS ENST00000418919.6 4877 13 2202 7 no_subtype FALSE canonical NA NA NA None 4 19 0 FALSE 0 0 NA B coding 134 402 193 594 PB.2551.3 chr3 - 3937 11 novel_in_catalog CCNL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 350 None 2 12 0 FALSE 0 0 NA C coding 299 897 2597 3493 PB.8273.1 chr15 - 6284 2 genic_intron novelGene_776 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5297 None 2 31 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4552.1 chr7 - 874 4 full-splice_match PPP1R35 ENST00000292330.2 1031 4 149 8 no_subtype FALSE canonical NA NA 276 None 2 3 0 FALSE 0 0 NA A coding 253 759 43 801 PB.5289.3 chr9 + 2648 3 novel_in_catalog GLIPR2 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 932 None 2 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5289.2 chr9 + 1984 4 novel_in_catalog GLIPR2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 271 None 5 14 0 FALSE 0 0 NA C coding 129 387 46 432 PB.5289.1 chr9 + 1892 5 full-splice_match GLIPR2 ENST00000377960.8 1890 5 -12 10 no_subtype FALSE canonical NA NA 350 None 194 6 0 FALSE 0 0 NA C coding 154 462 47 508 PB.8771.1 chr16 + 1562 4 full-splice_match HSBP1 ENST00000433866.6 8784 4 184 7038 no_subtype FALSE canonical NA NA 283 None 53 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8771.2 chr16 + 3483 5 novel_not_in_catalog HSBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3336 None 7 29 1 TRUE 0 0 NA C coding 107 321 1869 2189 PB.7503.4 chr13 + 3807 1 genic_intron novelGene_513 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9765.4 chr19 + 3369 22 full-splice_match SLC44A2 ENST00000335757.9 3671 22 298 4 no_subtype FALSE canonical NA NA 2092 None 22 7 0 FALSE 0 0 NA C coding 706 2118 79 2196 PB.3478.3 chr5 + 2872 13 novel_not_in_catalog TCF7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1639 None 7 22 2 TRUE 0 0 NA B coding 300 900 92 991 PB.9765.1 chr19 + 3299 22 full-splice_match SLC44A2 ENST00000407327.8 3301 22 7 -5 no_subtype FALSE canonical NA NA 2022 None 141 6 0 FALSE 0 0 NA C coding 704 2112 15 2126 PB.9765.2 chr19 + 3367 23 novel_not_in_catalog SLC44A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2089 None 2 5 0 FALSE 0 0 NA C coding 644 1932 77 2008 PB.2977.5 chr4 - 3243 2 novel_in_catalog PPP3CA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 405 None 4 29 0 FALSE 0 0 NA C coding 114 342 234 575 PB.936.1 chr1 + 1899 9 full-splice_match TROVE2 ENST00000400968.6 2143 9 228 16 no_subtype FALSE canonical NA NA 1612 None 18 11 1 FALSE 0 0 NA C coding 538 1614 149 1762 PB.3478.1 chr5 + 2778 12 novel_not_in_catalog TCF7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1545 None 8 18 2 TRUE 0 0 NA B coding 269 807 91 897 PB.1780.1 chr2 + 2653 8 full-splice_match MOB4 ENST00000323303.8 3986 8 242 1091 no_subtype FALSE canonical NA NA 559 None 36 11 0 FALSE 0 0 NA C coding 225 675 14 688 PB.9139.15 chr17 + 1853 8 full-splice_match MLX ENST00000435881.6 2428 8 34 541 no_subtype FALSE canonical NA NA 701 None 5 8 0 FALSE 0 0 NA C coding 244 732 24 755 PB.9139.14 chr17 + 2019 9 novel_not_in_catalog MLX novel NA NA NA NA no_subtype FALSE canonical NA NA 1341 None 2 12 1 TRUE 0 0 NA C coding 298 894 41 934 PB.9083.1 chr17 + 2641 1 full-splice_match MLLT6 ENST00000615741.1 2937 1 2880 -2584 no_subtype FALSE canonical NA NA NA None 24 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4812.1 chr8 - 3760 9 novel_in_catalog CSGALNACT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 157 None 2 16 1 FALSE 0 0 NA A coding 530 1590 555 2144 PB.9139.11 chr17 + 2454 10 novel_not_in_catalog COASY novel NA NA NA NA no_subtype FALSE canonical NA NA 2087 None 3 3 0 TRUE 0 0 NA B coding 564 1692 456 2147 PB.9139.10 chr17 + 2890 8 novel_not_in_catalog COASY novel NA NA NA NA no_subtype FALSE canonical NA NA 2523 None 2 10 0 TRUE 0 0 NA B coding 707 2121 463 2583 PB.9139.13 chr17 + 1842 9 novel_not_in_catalog MLX novel NA NA NA NA no_subtype TRUE canonical NA NA 1160 None 25 9 1 TRUE 0 0 NA C coding 244 732 22 753 PB.9139.12 chr17 + 2721 9 novel_not_in_catalog COASY novel NA NA NA NA no_subtype FALSE canonical NA NA 2354 None 2 14 0 TRUE 0 0 NA B coding 654 1962 453 2414 PB.6718.1 chr11 - 1547 5 novel_not_in_catalog TMEM218 novel NA NA NA NA no_subtype FALSE canonical NA NA 41 None 2 10 1 TRUE 0 0 NA A coding 155 465 490 954 PB.271.1 chr1 + 2365 10 full-splice_match CDCA8 ENST00000373055.5 2469 10 100 4 no_subtype FALSE canonical NA NA 971 None 2 9 0 FALSE 0 0 NA A coding 280 840 174 1013 PB.6286.1 chr11 + 2122 12 novel_not_in_catalog HSD17B12 novel NA NA NA NA no_subtype FALSE canonical NA NA 866 None 2 6 0 TRUE 0 0 NA A coding 312 936 33 968 PB.2481.1 chr3 - 2812 9 novel_in_catalog RYK novel NA NA NA NA combination_of_known_junctions TRUE non_canonical NA NA 848 None 2 22 0 FALSE 0 0 NA A coding 369 1107 683 1789 PB.7637.1 chr14 + 1388 2 full-splice_match LTB4R ENST00000396789.4 4110 2 1625 1097 no_subtype FALSE canonical NA NA 85 None 27 3 0 FALSE 0 0 NA A coding 352 1056 101 1156 PB.9450.3 chr17 - 5801 28 incomplete-splice_match FASN ENST00000306749.3 8565 43 2732 32 5prime_fragment FALSE canonical NA NA 80 None 5 15 0 FALSE 0 0 NA B coding 1482 4446 575 5020 PB.1495.6 chr2 + 3475 14 novel_not_in_catalog ZAP70 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2991 None 2 19 2 TRUE 0 0 NA C coding 312 936 2177 3112 PB.9102.1 chr17 + 2115 12 full-splice_match PSMD3 ENST00000264639.8 2158 12 32 11 no_subtype FALSE canonical NA NA 1669 None 23 4 0 FALSE 0 0 NA A coding 534 1602 143 1744 PB.10923.2 chrX + 4566 17 full-splice_match DDX3X ENST00000399959.6 5399 17 764 69 no_subtype FALSE canonical NA NA 2000 None 45 7 0 FALSE 0 0 NA C coding 662 1986 92 2077 PB.5730.2 chr10 - 1107 1 genic_intron novelGene_313 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1069.1 chr1 - 2954 9 full-splice_match SUSD4 ENST00000366878.8 3025 9 68 3 no_subtype FALSE canonical NA NA 78 None 2 8 0 FALSE 0 0 NA A coding 490 1470 114 1583 PB.742.9 chr1 + 3575 16 novel_not_in_catalog SEMA4A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3545 None 3 8 3 TRUE 0 0 NA C coding 592 1776 1031 2806 PB.5730.1 chr10 - 1410 11 incomplete-splice_match KIF5B ENST00000302418.4 5877 26 65 4402 internal_fragment FALSE canonical NA NA 519 None 102 2 0 FALSE 0 0 NA A coding 339 1017 394 1410 PB.3537.2 chr5 - 1956 13 full-splice_match HARS ENST00000504156.5 3334 13 640 738 no_subtype TRUE canonical NA NA 170 None 39 2 0 FALSE 0 0 NA A coding 509 1527 81 1607 PB.150.1 chr1 - 1726 7 full-splice_match SYF2 ENST00000236273.8 1345 7 -32 -349 no_subtype FALSE canonical NA NA 82 None 5 6 0 FALSE 0 0 NA C coding 243 729 59 787 PB.150.2 chr1 - 1674 6 novel_in_catalog SYF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 58 None 2 1 0 FALSE 0 0 NA C coding 116 348 35 382 PB.10572.8 chr21 + 1478 9 novel_in_catalog MX2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1344 None 2 0 0 FALSE 0 0 NA C coding 468 1404 73 1476 PB.1337.1 chr2 - 1522 1 antisense novelGene_SPTBN1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1463.3 chr2 + 1609 2 genic_intron novelGene_786 novel NA NA NA NA no_subtype FALSE canonical NA NA 432 None 2 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5281.1 chr9 - 1232 5 full-splice_match SIT1 ENST00000259608.7 1231 5 -9 8 no_subtype FALSE canonical NA NA 196 None 8 2 0 FALSE 0 0 NA A coding 196 588 97 684 PB.9566.4 chr18 - 2865 17 novel_not_in_catalog MBD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 92 None 2 4 0 FALSE 0 0 NA C coding 655 1965 118 2082 PB.7941.6 chr14 + 2968 6 incomplete-splice_match EIF5 ENST00000558506.1 4384 10 1404 12 internal_fragment FALSE canonical NA NA 714 None 7 23 0 FALSE 0 0 NA C coding 237 711 91 801 PB.5750.1 chr10 + 3440 6 novel_not_in_catalog ZNF37A novel NA NA NA NA no_subtype FALSE canonical NA NA 415 None 2 15 0 FALSE 0 0 NA B coding 561 1683 178 1860 PB.5750.2 chr10 + 3291 5 novel_not_in_catalog ZNF37A novel NA NA NA NA no_subtype FALSE canonical NA NA 264 None 2 11 0 FALSE 0 0 NA B coding 471 1413 297 1709 PB.1990.1 chr3 + 1962 1 novel_in_catalog IL17RE novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A coding 86 258 120 377 PB.7941.2 chr14 + 892 7 incomplete-splice_match EIF5 ENST00000216554.7 5945 12 239 4814 3prime_fragment FALSE canonical NA NA 876 None 7 0 0 FALSE 0 0 NA C coding 151 453 438 890 PB.9566.7 chr18 - 2978 17 novel_in_catalog MBD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 136 None 7 7 1 FALSE 0 0 NA C coding 604 1812 162 1973 PB.10572.6 chr21 + 2502 13 incomplete-splice_match MX2 ENST00000330714.7 3042 14 251 289 internal_fragment FALSE canonical NA NA 1838 None 168 3 0 FALSE 0 0 NA C coding 690 2070 9 2078 PB.5261.1 chr9 - 1809 7 novel_not_in_catalog AQP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 168 None 17 9 0 TRUE 0 0 NA A coding 292 876 64 939 PB.1495.2 chr2 + 2878 13 novel_in_catalog ZAP70 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2396 None 19 9 0 FALSE 0 0 NA C coding 412 1236 124 1359 PB.1110.1 chr1 - 3248 24 novel_not_in_catalog TTC13 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 289 None 2 29 3 TRUE 0 0 NA B coding 857 2571 19 2589 PB.7835.1 chr14 + 1300 9 full-splice_match AHSA1 ENST00000216479.7 1402 9 91 11 no_subtype TRUE canonical NA NA 913 None 16 0 0 FALSE 0 0 NA A coding 338 1014 70 1083 PB.9703.2 chr19 - 3176 17 full-splice_match RANBP3 ENST00000439268.6 3186 17 10 0 no_subtype TRUE canonical NA NA 38 None 4 8 0 FALSE 0 0 NA C coding 562 1686 17 1702 PB.7941.8 chr14 + 2278 2 full-splice_match EIF5 ENST00000558800.1 552 2 86 -1812 no_subtype FALSE canonical NA NA 72 None 3 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1495.3 chr2 + 2412 14 full-splice_match ZAP70 ENST00000264972.9 2437 14 22 3 no_subtype FALSE canonical NA NA 1929 None 20 5 0 FALSE 0 0 NA C coding 619 1857 194 2050 PB.9618.1 chr18 + 1271 7 full-splice_match RBFA ENST00000306735.9 1407 7 128 8 no_subtype FALSE canonical NA NA 660 None 7 2 0 FALSE 0 0 NA A coding 343 1029 11 1039 PB.10944.1 chrX - 2752 6 full-splice_match ELK1 ENST00000247161.7 2695 6 -66 9 no_subtype FALSE canonical NA NA 132 None 82 8 0 FALSE 0 0 NA A coding 428 1284 167 1450 PB.6346.7 chr11 + 6053 1 genic_intron novelGene_571 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4931.1 chr8 + 1513 2 genic_intron novelGene_543 novel NA NA NA NA no_subtype FALSE canonical NA NA 1438 None 2 11 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8898.1 chr17 + 2786 13 incomplete-splice_match TNK1 ENST00000570896.5 3122 14 329 7 internal_fragment FALSE canonical NA NA 1989 None 10 0 0 FALSE 0 0 NA A coding 661 1983 118 2100 PB.5461.1 chr9 + 2582 1 antisense novelGene_WHRN_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A coding 161 483 1567 2049 PB.3097.1 chr4 + 3200 26 novel_not_in_catalog KIAA0922 novel NA NA NA NA no_subtype TRUE canonical NA NA 2829 None 7 0 0 TRUE 0 0 NA A coding 1053 3159 41 3199 PB.6208.1 chr11 + 2850 2 genic_intron novelGene_97 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2078 None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9646.1 chr19 - 2088 1 incomplete-splice_match TCF3 ENST00000344749.9 4289 17 2194 8 no_subtype FALSE canonical NA NA NA None 12 18 0 FALSE 0 0 NA A coding 109 327 1037 1363 PB.1495.1 chr2 + 2892 14 novel_not_in_catalog ZAP70 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2409 None 2 14 0 FALSE 0 0 NA C coding 312 936 1595 2530 PB.3849.1 chr6 - 2058 15 full-splice_match WDR46 ENST00000374617.8 2358 15 296 4 no_subtype FALSE canonical NA NA 130 None 9 4 0 FALSE 0 0 NA A coding 610 1830 62 1891 PB.10572.2 chr21 + 2813 15 novel_not_in_catalog MX2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2147 None 7 2 0 FALSE 0 0 NA C coding 715 2145 243 2387 PB.146.5 chr1 + 3699 17 novel_in_catalog SRRM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2625 None 15 7 0 FALSE 0 0 NA C coding 902 2706 22 2727 PB.146.4 chr1 + 3710 17 full-splice_match SRRM1 ENST00000323848.13 4011 17 294 7 no_subtype FALSE canonical NA NA 2631 None 8 8 1 FALSE 0 0 NA C coding 904 2712 22 2733 PB.146.7 chr1 + 5594 1 novel_in_catalog SRRM1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 47 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.146.6 chr1 + 3613 17 novel_in_catalog SRRM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2533 None 2 20 2 FALSE 0 0 NA C coding 872 2616 20 2635 PB.146.1 chr1 + 3786 18 novel_in_catalog SRRM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2706 None 12 8 0 FALSE 0 0 NA C coding 918 2754 55 2808 PB.10572.1 chr21 + 2699 14 full-splice_match MX2 ENST00000330714.7 3042 14 56 287 no_subtype TRUE canonical NA NA 2033 None 57 2 0 FALSE 0 0 NA C coding 715 2145 129 2273 PB.146.3 chr1 + 2879 5 novel_in_catalog SRRM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 450 None 2 27 0 FALSE 0 0 NA C coding 180 540 46 585 PB.146.2 chr1 + 2491 16 incomplete-splice_match SRRM1 ENST00000479034.5 2671 17 -30 210 3prime_fragment FALSE canonical NA NA 2295 None 2 4 1 FALSE 0 0 NA C coding 814 2442 50 2491 PB.3049.2 chr4 - 6793 8 full-splice_match SETD7 ENST00000274031.7 7365 8 565 7 no_subtype FALSE canonical NA NA 112 None 6 44 1 FALSE 0 0 NA C coding 366 1098 73 1170 PB.8688.2 chr16 - 3233 7 novel_in_catalog DPEP2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2276 None 4 7 0 FALSE 0 0 NA B coding 276 828 1955 2782 PB.8620.6 chr16 - 5836 3 genic_intron novelGene_550 novel NA NA NA NA no_subtype FALSE canonical NA NA 3542 None 2 46 1 FALSE 0 0 NA A coding 270 810 1429 2238 PB.5768.18 chr10 - 3408 11 novel_not_in_catalog NCOA4 novel NA NA NA NA no_subtype FALSE canonical NA NA 45 None 2 15 0 TRUE 0 0 NA C coding 614 1842 65 1906 PB.9998.1 chr19 - 1359 2 full-splice_match SERTAD3 ENST00000322354.3 1734 2 370 5 no_subtype FALSE canonical NA NA 121 None 16 5 0 FALSE 0 0 NA A coding 196 588 128 715 PB.5768.11 chr10 - 3247 12 novel_not_in_catalog NCOA4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 94 None 2 30 4 TRUE 0 0 NA C coding 330 990 755 1744 PB.8014.1 chr15 - 4659 25 full-splice_match RPAP1 ENST00000304330.8 4665 25 0 6 no_subtype TRUE canonical NA NA 41 None 2 4 0 FALSE 0 0 NA A coding 1393 4179 118 4296 PB.5768.13 chr10 - 3410 11 novel_not_in_catalog NCOA4 novel NA NA NA NA no_subtype FALSE canonical NA NA 49 None 43 14 0 TRUE 0 0 NA C coding 614 1842 69 1910 PB.5768.12 chr10 - 3409 11 novel_not_in_catalog NCOA4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 39 None 2 16 2 TRUE 0 0 NA C coding 614 1842 65 1906 PB.5768.15 chr10 - 3403 10 novel_not_in_catalog NCOA4 novel NA NA NA NA no_subtype FALSE canonical NA NA 47 None 8 17 1 FALSE 0 0 NA C coding 614 1842 59 1900 PB.9093.1 chr17 + 2012 15 full-splice_match STARD3 ENST00000336308.9 2132 15 100 20 no_subtype FALSE canonical NA NA 1351 None 7 3 0 FALSE 0 0 NA C coding 445 1335 119 1453 PB.302.1 chr1 + 1481 1 antisense novelGene_FOXJ3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 6 0 FALSE 0 0 NA A coding 120 360 566 925 PB.10441.1 chr20 + 3466 10 full-splice_match PTPN1 ENST00000371621.4 4008 10 58 484 no_subtype FALSE canonical NA NA 1400 None 16 7 0 FALSE 0 0 NA C coding 435 1305 117 1421 PB.10441.2 chr20 + 3507 1 novel_in_catalog PTPN1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 19 0 FALSE 0 0 NA C coding 136 408 146 553 PB.10441.3 chr20 + 1943 2 novel_in_catalog PTPN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 203 None 2 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10441.4 chr20 + 5652 2 genic_intron novelGene_500 novel NA NA NA NA no_subtype TRUE canonical NA NA 5615 None 3 30 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1495.8 chr2 + 3378 13 novel_not_in_catalog ZAP70 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2896 None 3 9 0 FALSE 0 0 NA C coding 307 921 167 1087 PB.1601.2 chr2 + 1345 1 incomplete-splice_match MGAT5 ENST00000281923.3 8144 16 6796 4 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1353.1 chr2 + 1696 1 antisense novelGene_BCL11A_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.122.2 chr1 - 3063 1 genic_intron novelGene_209 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A coding 103 309 1815 2123 PB.5205.1 chr9 + 3022 1 genic_intron novelGene_28 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.201 chr14 - 1512 9 fusion IGHV3-36,IGHV3-35,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 87 None 5 12 4 TRUE 0 0 NA A coding 196 588 791 1378 PB.8143.1 chr15 - 852 5 full-splice_match PPIB ENST00000300026.3 1081 5 215 14 no_subtype FALSE canonical NA NA 139 None 4 1 0 FALSE 0 0 NA A coding 216 648 5 652 PB.7959.200 chr14 - 1494 9 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 81 None 4 26 5 TRUE 0 0 NA B coding 196 588 773 1360 PB.1976.2 chr3 + 6325 34 novel_not_in_catalog ITPR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 4969 None 2 10 0 TRUE 0 0 NA B coding 1641 4923 131 5053 PB.4990.5 chr8 - 4419 9 full-splice_match PAG1 ENST00000220597.4 10744 9 -47 6372 no_subtype FALSE canonical NA NA 525 None 5 17 0 FALSE 0 0 NA C coding 432 1296 759 2054 PB.1976.1 chr3 + 5903 42 novel_not_in_catalog ITPR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 5776 None 2 7 2 TRUE 0 0 NA B coding 1851 5553 350 5902 PB.7959.203 chr14 - 1589 10 fusion IGHV7-34-1,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 102 None 2 15 4 TRUE 0 0 NA A coding 196 588 868 1455 PB.6687.2 chr11 - 1898 9 full-splice_match DPAGT1 ENST00000354202.8 2205 9 296 11 no_subtype FALSE canonical NA NA 352 None 8 3 0 FALSE 0 0 NA A coding 408 1224 192 1415 PB.2160.3 chr3 - 4131 23 novel_not_in_catalog SCAP novel NA NA NA NA no_subtype FALSE canonical NA NA 64 None 21 3 1 FALSE 0 0 NA B coding 1278 3834 163 3996 PB.7182.4 chr12 + 1285 9 novel_not_in_catalog SLC25A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 950 None 11 1 2 TRUE 0 0 NA C coding 361 1083 26 1108 PB.8705.1 chr16 + 2182 17 full-splice_match UTP4 ENST00000314423.11 2322 17 138 2 no_subtype FALSE canonical NA NA 1983 None 4 1 1 FALSE 0 0 NA A coding 686 2058 40 2097 PB.4747.1 chr7 + 1456 3 full-splice_match GIMAP5 ENST00000358647.4 2291 3 344 491 no_subtype FALSE canonical NA NA 66 None 187 2 0 FALSE 0 0 NA C coding 307 921 24 944 PB.7959.202 chr14 - 1534 10 fusion IGHV1-24,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 66 None 2 13 5 TRUE 0 0 NA B coding 196 588 813 1400 PB.1110.4 chr1 - 2891 19 novel_in_catalog TTC13 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 312 None 2 16 1 FALSE 0 0 NA B coding 731 2193 42 2234 PB.8302.1 chr15 + 2653 8 full-splice_match RCCD1 ENST00000394258.6 2689 8 34 2 no_subtype FALSE canonical NA NA 1147 None 2 18 1 FALSE 0 0 NA A coding 376 1128 169 1296 PB.821.1 chr1 + 1492 9 full-splice_match HSD17B7 ENST00000254521.7 1190 9 -17 -285 no_subtype FALSE canonical NA NA 975 None 7 4 0 FALSE 0 0 NA A coding 341 1023 73 1095 PB.4308.1 chr7 + 1828 6 full-splice_match TSPAN13 ENST00000262067.4 2093 6 209 56 no_subtype FALSE canonical NA NA 764 None 9 8 0 FALSE 0 0 NA A coding 204 612 225 836 PB.9622.1 chr19 + 1355 6 novel_not_in_catalog MADCAM1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 876 None 2 7 2 TRUE 0 0 NA A coding 127 381 15 395 PB.9957.1 chr19 + 2786 7 novel_not_in_catalog ZNF567 novel NA NA NA NA no_subtype FALSE canonical NA NA 416 None 8 6 0 TRUE 0 0 NA B coding 647 1941 191 2131 PB.10932.2 chrX + 5620 28 novel_in_catalog KDM6A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4405 None 3 7 0 FALSE 0 0 NA B coding 1343 4029 404 4432 PB.10932.1 chrX + 5585 30 novel_not_in_catalog KDM6A novel NA NA NA NA no_subtype FALSE canonical NA NA 4720 None 2 13 0 FALSE 0 0 NA B coding 1305 3915 445 4359 PB.9957.2 chr19 + 3000 8 novel_not_in_catalog ZNF567 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 630 None 7 10 2 TRUE 0 0 NA B coding 647 1941 405 2345 PB.5088.1 chr8 - 2591 1 genic_intron novelGene_1053 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5635.1 chr9 - 2652 13 full-splice_match ANAPC2 ENST00000323927.2 2632 13 -26 6 no_subtype FALSE canonical NA NA 148 None 53 9 0 FALSE 0 0 NA A coding 822 2466 32 2497 PB.7256.1 chr12 - 2319 7 full-splice_match PPP1CC ENST00000335007.9 2559 7 10 230 no_subtype FALSE canonical NA NA 236 None 10 8 0 FALSE 0 0 NA C coding 323 969 182 1150 PB.8283.1 chr15 - 2700 3 full-splice_match PEX11A ENST00000300056.7 2740 3 28 12 no_subtype FALSE canonical NA NA 178 None 2 14 0 FALSE 0 0 NA A coding 247 741 123 863 PB.4289.1 chr7 - 1182 5 full-splice_match KDELR2 ENST00000258739.8 2884 5 63 1639 no_subtype FALSE canonical NA NA 213 None 144 2 0 FALSE 0 0 NA C coding 212 636 123 758 PB.4289.2 chr7 - 2859 5 novel_not_in_catalog KDELR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 255 None 2 14 0 FALSE 0 0 NA C coding 150 450 351 800 PB.4289.3 chr7 - 2676 1 novel_in_catalog KDELR2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4418.12 chr7 + 2736 1 genic_intron novelGene_497 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 16 8 0 FALSE 0 0 NA A coding 101 303 445 747 PB.4418.13 chr7 + 3329 6 novel_not_in_catalog IKZF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 691 None 3 5 0 TRUE 0 0 NA B coding 447 1341 58 1398 PB.8261.1 chr15 - 1416 4 full-splice_match C15orf40 ENST00000304177.9 11244 4 -1 9829 no_subtype FALSE canonical NA NA 120 None 4 8 0 FALSE 0 0 NA A coding 153 459 10 468 PB.5831.11 chr10 - 1634 7 full-splice_match C10orf54 ENST00000394957.7 4689 7 -41 3096 no_subtype FALSE canonical NA NA 182 None 3 2 0 FALSE 0 0 NA C coding 311 933 101 1033 PB.6697.1 chr11 - 3359 3 antisense novelGene_ARHGEF12_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 496 None 2 24 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2661.1 chr3 + 3117 1 full-splice_match MIR28 ENST00000384918.1 86 1 77 -3108 no_subtype FALSE canonical NA NA NA None 7 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4597.2 chr7 - 3725 26 novel_not_in_catalog COG5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 124 None 2 20 1 TRUE 0 0 NA C coding 463 1389 31 1419 PB.4585.3 chr7 + 1661 1 novel_in_catalog KMT2E novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 11 5 0 FALSE 0 0 NA B coding 45 135 303 437 PB.9136.6 chr17 - 2664 25 novel_not_in_catalog STAT3 novel NA NA NA NA no_subtype FALSE canonical NA NA 153 None 146 3 1 TRUE 0 0 NA B coding 543 1629 862 2490 PB.9136.7 chr17 - 2899 25 novel_not_in_catalog STAT3 novel NA NA NA NA no_subtype FALSE canonical NA NA 59 None 4 6 2 TRUE 0 0 NA B coding 495 1485 768 2252 PB.1321.2 chr2 - 4078 6 novel_not_in_catalog MCFD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 80 None 16 23 2 TRUE 0 0 NA B coding 144 432 93 524 PB.9136.2 chr17 - 2870 27 novel_not_in_catalog STAT3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 161 None 2 12 3 TRUE 0 0 NA B coding 543 1629 870 2498 PB.10154.1 chr19 + 2724 7 novel_not_in_catalog ZNF766 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1778 None 59 6 1 TRUE 0 0 NA B coding 483 1449 53 1501 PB.7625.1 chr14 + 1287 8 fusion DHRS4,DHRS4L2 novel NA NA NA NA no_subtype FALSE canonical NA NA 777 None 5 8 1 FALSE 0 0 NA A coding 232 696 57 752 PB.9136.1 chr17 - 1316 1 incomplete-splice_match STAT3 ENST00000264657.9 5047 24 3730 2 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1633.8 chr2 - 5618 1 genic_intron novelGene_1221 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1633.9 chr2 - 2760 1 genic_intron novelGene_1222 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6911.1 chr12 - 2944 9 full-splice_match TWF1 ENST00000395510.6 3045 9 92 9 no_subtype FALSE canonical NA NA 63 None 269 7 0 FALSE 0 0 NA A coding 350 1050 39 1088 PB.10818.2 chr22 - 5239 3 novel_not_in_catalog LDOC1L novel NA NA NA NA no_subtype FALSE canonical NA NA 59 None 6 22 1 TRUE 0 0 NA B coding 239 717 315 1031 PB.10818.1 chr22 - 6249 4 novel_not_in_catalog LDOC1L novel NA NA NA NA no_subtype FALSE canonical NA NA 45 None 2 35 2 TRUE 0 0 NA B coding 239 717 301 1017 PB.8796.1 chr16 + 740 4 full-splice_match MAP1LC3B ENST00000268607.9 2688 4 536 1412 no_subtype FALSE canonical NA NA 295 None 16 3 0 FALSE 0 0 NA A coding 125 375 93 467 PB.2977.6 chr4 - 1638 3 novel_in_catalog PPP3CA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 816 None 2 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10072.4 chr19 - 2970 18 full-splice_match STRN4 ENST00000263280.10 3210 18 230 10 no_subtype FALSE canonical NA NA 102 None 2 11 0 FALSE 0 0 NA A coding 634 1902 178 2079 PB.4597.3 chr7 + 3418 2 genic_intron novelGene_962 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2184 None 2 28 0 FALSE 0 0 NA A coding 98 294 189 482 PB.2977.7 chr4 - 3042 2 genic_intron novelGene_922 novel NA NA NA NA no_subtype FALSE canonical NA NA 2521 None 7 17 0 FALSE 0 0 NA A coding 156 468 1076 1543 PB.663.1 chr1 - 1699 10 novel_not_in_catalog CTSS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 131 None 4 3 0 TRUE 0 0 NA C coding 331 993 133 1125 PB.3701.1 chr5 - 1763 1 genic_intron novelGene_1339 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 16 0 FALSE 0 0 NA A coding 126 378 646 1023 PB.4219.2 chr6 + 3727 3 novel_in_catalog SNX9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2025 None 2 29 0 FALSE 0 0 NA C coding 101 303 1768 2070 PB.4051.3 chr6 - 1527 7 full-splice_match ATG5 ENST00000369070.5 3088 7 114 1447 no_subtype FALSE canonical NA NA 152 None 2 2 1 FALSE 0 0 NA C coding 197 591 317 907 PB.663.7 chr1 - 3682 8 novel_not_in_catalog CTSS novel NA NA NA NA no_subtype FALSE canonical NA NA 130 None 2 21 0 TRUE 0 0 NA C coding 220 660 132 791 PB.663.6 chr1 - 1187 9 novel_not_in_catalog CTSS novel NA NA NA NA no_subtype FALSE canonical NA NA 73 None 297 1 0 TRUE 0 0 NA C coding 331 993 75 1067 PB.5863.1 chr10 - 3133 2 genic_intron novelGene_722 novel NA NA NA NA no_subtype FALSE canonical NA NA 676 None 5 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7831.1 chr14 - 4024 10 full-splice_match ANGEL1 ENST00000251089.6 5176 10 79 1073 no_subtype FALSE canonical NA NA 98 None 23 13 0 FALSE 0 0 NA A coding 670 2010 35 2044 PB.7959.199 chr14 - 1533 9 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 9 3 TRUE 0 0 NA B coding 196 588 812 1399 PB.7959.198 chr14 - 1492 7 fusion IGHV2-5,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 63 None 2 3 3 TRUE 0 0 NA A coding 196 588 771 1358 PB.10195.1 chr19 - 2932 6 novel_not_in_catalog ZNF418 novel NA NA NA NA no_subtype FALSE canonical NA NA 208 None 3 12 2 TRUE 0 0 NA A coding 625 1875 176 2050 PB.7959.195 chr14 - 1579 11 fusion IGHV1-3,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 102 None 2 13 5 TRUE 0 0 NA B coding 196 588 858 1445 PB.10341.2 chr20 + 2810 18 novel_not_in_catalog ACSS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1940 None 67 4 1 FALSE 0 0 NA A coding 285 855 1211 2065 PB.7856.1 chr14 + 1468 6 full-splice_match CALM1 ENST00000356978.8 4242 6 119 2655 no_subtype FALSE canonical NA NA 550 None 111 5 0 FALSE 0 0 NA C coding 149 447 130 576 PB.7959.196 chr14 - 1544 13 fusion IGHG1,IGHV3-13 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 92 None 5 8 4 TRUE 0 0 NA A coding 196 588 823 1410 PB.7959.191 chr14 - 1473 9 fusion IGHV4-34,IGHG1,IGHV3-21,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 58 8 3 TRUE 0 0 NA B coding 196 588 751 1338 PB.7959.190 chr14 - 1559 12 fusion IGHV1-24,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 104 None 2 14 7 TRUE 0 0 NA B coding 196 588 837 1424 PB.7856.5 chr14 + 2857 1 novel_in_catalog CALM1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7856.4 chr14 + 2684 2 full-splice_match CALM1 ENST00000556721.1 444 2 -2242 2 no_subtype FALSE canonical NA NA 2589 None 3 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7888.2 chr14 - 1607 6 novel_not_in_catalog SERPINA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 82 None 4 2 1 FALSE 0 0 NA C coding 418 1254 279 1532 PB.7888.3 chr14 - 1564 6 novel_not_in_catalog SERPINA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 45 None 24 9 0 TRUE 0 0 NA C coding 418 1254 236 1489 PB.7888.1 chr14 - 1403 5 novel_not_in_catalog SERPINA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 76 None 260 1 0 FALSE 0 0 NA C coding 418 1254 81 1334 PB.7888.6 chr14 - 5287 1 novel_in_catalog SERPINA1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 8 24 0 FALSE 0 0 NA C coding 134 402 3894 4295 PB.1591.1 chr2 - 2599 1 full-splice_match GNAQP1 ENST00000444815.2 1067 1 651 -2183 no_subtype FALSE canonical NA NA NA None 3 17 0 FALSE 0 0 NA A coding 123 369 26 394 PB.7888.4 chr14 - 3500 3 novel_not_in_catalog SERPINA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 82 None 2 8 0 FALSE 0 0 NA C coding 306 918 87 1004 PB.7888.5 chr14 - 1536 5 full-splice_match SERPINA1 ENST00000440909.5 3144 5 -21 1629 no_subtype FALSE canonical NA NA 202 None 3 2 0 FALSE 0 0 NA C coding 418 1254 207 1460 PB.2143.1 chr3 - 1396 11 novel_not_in_catalog LZTFL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 83 None 7 4 0 FALSE 0 0 NA A coding 299 897 81 977 PB.2191.2 chr3 - 2854 22 novel_not_in_catalog USP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 115 None 53 0 0 TRUE 0 0 NA B coding 916 2748 15 2762 PB.908.2 chr1 + 1811 12 novel_in_catalog DHX9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1330 None 2 3 0 FALSE 0 0 NA C coding 222 666 132 797 PB.2536.2 chr3 - 1493 2 full-splice_match P2RY13 ENST00000325602.5 2764 2 0 1271 no_subtype FALSE canonical NA NA 68 None 64 3 0 FALSE 0 0 NA A coding 354 1062 21 1082 PB.5548.2 chr9 - 2725 3 antisense novelGene_SET_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 745 None 2 22 2 FALSE 0 0 NA B coding 115 345 24 368 PB.11027.1 chrX + 2941 3 novel_not_in_catalog NHSL2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 191 None 4 15 1 TRUE 0 0 NA B coding 107 321 1409 1729 PB.9406.1 chr17 - 1459 7 full-splice_match TK1 ENST00000301634.11 1628 7 151 18 no_subtype FALSE canonical NA NA 154 None 15 4 0 FALSE 0 0 NA A coding 234 702 89 790 PB.2683.1 chr3 - 5009 19 full-splice_match TFRC ENST00000360110.8 5111 19 99 3 no_subtype FALSE canonical NA NA 48 None 2 17 0 FALSE 0 0 NA A coding 760 2280 72 2351 PB.6025.3 chr10 + 2795 7 full-splice_match SHOC2 ENST00000489390.1 815 7 -1 -1979 no_subtype FALSE canonical NA NA 755 None 2 8 0 FALSE 0 0 NA C coding 221 663 299 961 PB.6103.3 chr11 + 3535 13 novel_not_in_catalog ATHL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3416 None 4 17 1 TRUE 0 0 NA B coding 368 1104 842 1945 PB.6103.2 chr11 + 2521 13 novel_not_in_catalog ATHL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2330 None 7 8 0 FALSE 0 0 NA B coding 560 1680 842 2521 PB.6103.1 chr11 + 3341 15 novel_not_in_catalog ATHL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3240 None 10 11 1 TRUE 0 0 NA B coding 737 2211 226 2436 PB.7639.3 chr14 - 1815 10 full-splice_match RIPK3 ENST00000216274.9 1930 10 102 13 no_subtype FALSE canonical NA NA 137 None 8 0 0 FALSE 0 0 NA C coding 518 1554 118 1671 PB.6103.7 chr11 + 3724 12 novel_not_in_catalog ATHL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3621 None 4 18 1 TRUE 0 0 NA B coding 392 1176 843 2018 PB.6103.5 chr11 + 3405 14 novel_not_in_catalog ATHL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3287 None 4 19 1 TRUE 0 0 NA B coding 325 975 880 1854 PB.6103.4 chr11 + 3415 14 novel_not_in_catalog ATHL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3296 None 52 14 1 TRUE 0 0 NA B coding 560 1680 813 2492 PB.1166.1 chr1 - 3122 8 novel_not_in_catalog SH3BP5L novel NA NA NA NA no_subtype FALSE canonical NA NA 68 None 24 15 0 TRUE 0 0 NA B coding 393 1179 500 1678 PB.6103.9 chr11 + 2913 13 novel_not_in_catalog ATHL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2219 None 2 16 1 TRUE 0 0 NA B coding 321 963 843 1805 PB.6103.8 chr11 + 3432 15 novel_not_in_catalog ATHL1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3324 None 3 18 2 TRUE 0 0 NA B coding 560 1680 841 2520 PB.2888.1 chr4 - 3052 1 novel_in_catalog NUP54 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 17 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5487.2 chr9 - 2702 5 novel_not_in_catalog PDCL novel NA NA NA NA no_subtype TRUE canonical NA NA 80 None 62 20 0 TRUE 0 0 NA B coding 301 903 86 988 PB.479.2 chr1 + 3146 12 novel_not_in_catalog CDC7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1433 None 3 10 0 FALSE 0 0 NA B coding 574 1722 104 1825 PB.4593.2 chr7 - 2856 9 novel_not_in_catalog NAMPT novel NA NA NA NA no_subtype FALSE canonical NA NA 115 None 2 13 0 TRUE 0 0 NA B coding 368 1104 59 1162 PB.479.1 chr1 + 3162 12 novel_not_in_catalog CDC7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1442 None 2 8 0 FALSE 0 0 NA B coding 574 1722 113 1834 PB.10822.1 chr22 + 2836 10 novel_not_in_catalog FAM118A novel NA NA NA NA no_subtype FALSE canonical NA NA 2359 None 19 16 1 TRUE 0 0 NA B coding 357 1071 243 1313 PB.2508.1 chr3 - 5677 5 incomplete-splice_match XRN1 ENST00000498077.6 5600 27 2702 -2779 5prime_fragment FALSE canonical NA NA 98 None 2 38 0 FALSE 0 0 NA C coding 239 717 60 776 PB.3595.1 chr5 + 2776 12 novel_not_in_catalog G3BP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1322 None 419 14 1 TRUE 0 0 NA C coding 466 1398 129 1526 PB.7880.3 chr14 + 3446 12 novel_not_in_catalog UBR7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2729 None 12 10 1 TRUE 0 0 NA C coding 425 1275 36 1310 PB.7880.1 chr14 + 3476 11 full-splice_match UBR7 ENST00000013070.10 3694 11 217 1 no_subtype FALSE canonical NA NA 1204 None 29 14 0 FALSE 0 0 NA C coding 425 1275 20 1294 PB.7880.4 chr14 + 3381 11 novel_not_in_catalog UBR7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2667 None 2 12 1 TRUE 0 0 NA C coding 376 1128 36 1163 PB.1929.2 chr2 + 1552 5 full-splice_match UGT1A1 ENST00000305208.9 2382 5 830 0 no_subtype FALSE canonical NA NA 514 None 2 7 1 FALSE 0 0 NA A coding 265 795 15 809 PB.839.3 chr1 - 2858 7 novel_not_in_catalog CD247 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 117 None 2 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4593.1 chr7 - 2100 12 novel_not_in_catalog NAMPT novel NA NA NA NA no_subtype FALSE canonical NA NA 156 None 40 6 0 TRUE 0 0 NA B coding 491 1473 100 1572 PB.4442.1 chr7 + 3338 17 novel_not_in_catalog TYW1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2132 None 16 6 0 TRUE 0 0 NA A coding 732 2196 156 2351 PB.3833.1 chr6 - 1505 7 full-splice_match DXO ENST00000337523.9 1628 7 111 12 no_subtype TRUE canonical NA NA 253 None 2 2 0 FALSE 0 0 NA A coding 396 1188 260 1447 PB.10329.1 chr20 + 1583 10 novel_not_in_catalog RALY novel NA NA NA NA no_subtype FALSE canonical NA NA 1234 None 24 6 0 TRUE 0 0 NA C coding 306 918 310 1227 PB.5352.2 chr9 - 2618 1 genic_intron novelGene_783 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10329.2 chr20 + 1535 9 full-splice_match RALY ENST00000375114.7 6430 9 268 4627 no_subtype FALSE canonical NA NA 1187 None 16 5 0 FALSE 0 0 NA C coding 290 870 311 1180 PB.10329.4 chr20 + 1441 8 novel_in_catalog RALY novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1093 None 2 5 0 FALSE 0 0 NA C coding 290 870 217 1086 PB.6798.1 chr12 - 2832 12 novel_in_catalog LPCAT3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 203 None 2 8 0 FALSE 0 0 NA C coding 347 1041 53 1093 PB.2036.3 chr3 - 3041 2 full-splice_match DPH3 ENST00000383775.4 3052 2 4 7 no_subtype FALSE canonical NA NA 197 None 8 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6798.3 chr12 - 2215 13 full-splice_match LPCAT3 ENST00000261407.8 2268 13 43 10 no_subtype FALSE canonical NA NA 194 None 4 12 1 FALSE 0 0 NA C coding 487 1461 44 1504 PB.6798.2 chr12 - 2932 11 full-splice_match LPCAT3 ENST00000535479.5 2902 11 -30 0 no_subtype FALSE canonical NA NA 234 None 2 11 2 FALSE 0 0 NA C coding 347 1041 84 1124 PB.881.3 chr1 - 4074 4 full-splice_match KIAA0040 ENST00000444639.5 4494 4 -137 557 no_subtype FALSE canonical NA NA 221 None 2 19 0 FALSE 0 0 NA C coding 99 297 605 901 PB.881.2 chr1 - 3352 3 full-splice_match KIAA0040 ENST00000545251.6 2485 3 -27 -840 no_subtype FALSE canonical NA NA 142 None 107 12 0 FALSE 0 0 NA C coding 99 297 452 748 PB.881.1 chr1 - 2158 1 novel_in_catalog KIAA0040 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 29 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5352.1 chr9 + 6505 2 antisense novelGene_ZCCHC6_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2742 None 2 46 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2397.2 chr3 + 1977 7 incomplete-splice_match UPK1B ENST00000264234.7 2118 8 130 11 internal_fragment FALSE canonical NA NA 751 None 7 7 0 FALSE 0 0 NA B coding 260 780 20 799 PB.5624.1 chr9 + 3130 2 genic_intron novelGene_1166 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1783 None 3 21 1 FALSE 0 0 NA A coding 162 486 762 1247 PB.10865.1 chrX + 2689 2 genic TLR7 novel NA NA NA NA no_subtype TRUE canonical NA NA 2095 None 2 7 1 TRUE 0 0 NA A coding 125 375 1528 1902 PB.8826.2 chr17 - 5089 23 novel_not_in_catalog ABR novel NA NA NA NA no_subtype FALSE canonical NA NA 223 None 2 29 2 TRUE 0 0 NA B coding 769 2307 248 2554 PB.8826.1 chr17 - 5052 23 novel_not_in_catalog ABR novel NA NA NA NA no_subtype TRUE canonical NA NA 185 None 5 25 1 TRUE 0 0 NA B coding 822 2466 51 2516 PB.1638.1 chr2 - 1344 8 full-splice_match MMADHC ENST00000303319.9 1436 8 84 8 no_subtype FALSE canonical NA NA 69 None 20 1 0 FALSE 0 0 NA A coding 296 888 122 1009 PB.2856.1 chr4 - 2175 7 full-splice_match NOA1 ENST00000264230.4 3415 7 1258 -18 no_subtype FALSE canonical NA NA 1124 None 5 2 0 FALSE 0 0 NA A coding 631 1893 182 2074 PB.928.6 chr1 - 3238 16 novel_in_catalog TPR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 399 None 2 15 1 FALSE 0 0 NA C coding 575 1725 249 1973 PB.8538.2 chr16 + 1867 3 novel_in_catalog ZG16 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 199 None 2 7 0 FALSE 0 0 NA C coding 167 501 12 512 PB.8538.1 chr16 + 626 4 full-splice_match ZG16 ENST00000400752.5 3132 4 45 2461 no_subtype FALSE canonical NA NA 217 None 4 1 0 FALSE 0 0 NA C coding 167 501 30 530 PB.928.2 chr1 - 7458 51 full-splice_match TPR ENST00000367478.8 9708 51 71 2179 no_subtype FALSE canonical NA NA 377 None 2 2 0 FALSE 0 0 NA C coding 2363 7089 227 7315 PB.10845.1 chr22 - 1564 9 full-splice_match TYMP ENST00000487577.5 1751 9 184 3 no_subtype FALSE canonical NA NA 317 None 23 1 1 FALSE 0 0 NA A coding 482 1446 104 1549 PB.9587.1 chr18 + 3158 1 antisense novelGene_PIGN_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6113.1 chr11 - 1884 11 full-splice_match IRF7 ENST00000397574.6 1968 11 20 64 no_subtype TRUE canonical NA NA 67 None 21 6 0 FALSE 0 0 NA A coding 503 1509 351 1859 PB.5102.1 chr8 + 3466 1 antisense novelGene_FBXO32_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 22 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9251.1 chr17 + 3096 11 full-splice_match AKAP1 ENST00000337714.7 3970 11 92 782 no_subtype FALSE canonical NA NA 2778 None 38 4 0 FALSE 0 0 NA C coding 903 2709 142 2850 PB.3442.1 chr5 + 2987 12 novel_in_catalog CSNK1G3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1736 None 32 11 0 FALSE 0 0 NA B coding 415 1245 544 1788 PB.2440.1 chr3 + 1685 6 full-splice_match UMPS ENST00000232607.6 6738 6 70 4983 no_subtype FALSE canonical NA NA 1309 None 11 3 0 FALSE 0 0 NA A coding 480 1440 37 1476 PB.4145.1 chr6 - 2822 18 full-splice_match HBS1L ENST00000367837.9 7163 18 83 4258 no_subtype FALSE canonical NA NA 167 None 144 7 1 FALSE 0 0 NA C coding 684 2052 125 2176 PB.10741.13 chr22 + 2704 9 incomplete-splice_match CYTH4 ENST00000248901.10 3206 13 494 8 internal_fragment FALSE canonical NA NA 805 None 4 11 0 FALSE 0 0 NA C coding 232 696 180 875 PB.10741.12 chr22 + 2823 10 novel_not_in_catalog CYTH4 novel NA NA NA NA no_subtype FALSE canonical NA NA 917 None 2 8 0 FALSE 0 0 NA C coding 324 972 16 987 PB.10741.11 chr22 + 2995 12 novel_in_catalog CYTH4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1095 None 28 9 0 FALSE 0 0 NA C coding 337 1011 155 1165 PB.2520.1 chr3 + 1785 8 novel_not_in_catalog GYG1 novel NA NA NA NA no_subtype FALSE canonical NA NA 927 None 31 4 0 TRUE 0 0 NA A coding 333 999 100 1098 PB.9297.1 chr17 - 3474 2 novel_in_catalog CD79B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2890 None 5 11 0 FALSE 0 0 NA C coding 123 369 1911 2279 PB.5694.3 chr10 - 1420 9 full-splice_match RSU1 ENST00000345264.9 3834 9 107 2307 no_subtype FALSE canonical NA NA 107 None 51 8 0 FALSE 0 0 NA C coding 277 831 111 941 PB.5694.2 chr10 - 3579 12 novel_not_in_catalog RSU1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 67 None 18 27 3 TRUE 0 0 NA C coding 277 831 71 901 PB.465.1 chr1 + 1460 5 full-splice_match LMO4 ENST00000370544.9 5405 5 417 3528 no_subtype FALSE canonical NA NA 852 None 12 6 0 FALSE 0 0 NA A coding 165 495 364 858 PB.5694.4 chr10 - 2867 8 novel_in_catalog RSU1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 92 None 5 21 1 FALSE 0 0 NA C coding 243 729 96 824 PB.4857.1 chr8 - 3617 9 full-splice_match SCARA5 ENST00000354914.7 4026 9 50 359 no_subtype FALSE canonical NA NA 421 None 25 9 0 FALSE 0 0 NA A coding 495 1485 437 1921 PB.1349.2 chr2 - 3019 1 incomplete-splice_match BCL11A ENST00000335712.10 5942 4 1499 1425 no_subtype FALSE canonical NA NA NA None 5 7 0 FALSE 0 0 NA B coding 402 1206 30 1235 PB.11078.2 chrX - 2677 13 full-splice_match TRMT2B ENST00000545398.5 3106 13 215 214 no_subtype FALSE canonical NA NA 118 None 6 6 0 FALSE 0 0 NA C coding 504 1512 142 1653 PB.11078.1 chrX - 2826 12 novel_in_catalog TRMT2B novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 329 None 3 7 0 FALSE 0 0 NA C coding 385 1155 439 1593 PB.714.1 chr1 + 1724 8 full-splice_match FLAD1 ENST00000315144.14 1730 8 4 2 no_subtype FALSE canonical NA NA 1516 None 11 0 0 FALSE 0 0 NA C coding 490 1470 180 1649 PB.714.4 chr1 + 1411 3 full-splice_match FLAD1 ENST00000487371.1 757 3 -76 -578 no_subtype FALSE canonical NA NA 504 None 2 4 0 FALSE 0 0 NA C coding 296 888 424 1311 PB.9817.1 chr19 + 2607 14 full-splice_match IL27RA ENST00000263379.3 2962 14 41 314 no_subtype TRUE canonical NA NA 1800 None 42 2 0 FALSE 0 0 NA A coding 636 1908 85 1992 PB.9545.2 chr18 - 1674 7 full-splice_match TPGS2 ENST00000334295.8 4030 7 386 1970 no_subtype FALSE canonical NA NA 127 None 11 5 0 FALSE 0 0 NA C coding 300 900 43 942 PB.6726.4 chr11 - 3115 13 novel_in_catalog SRPRA novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 207 None 2 5 0 FALSE 0 0 NA C coding 353 1059 91 1149 PB.10082.1 chr19 - 1661 12 full-splice_match KPTN ENST00000338134.7 1691 12 17 13 no_subtype FALSE canonical NA NA 317 None 2 0 0 FALSE 0 0 NA A coding 435 1305 95 1399 PB.1587.1 chr2 + 1707 1 genic_intron novelGene_1124 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A coding 114 342 899 1240 PB.4749.1 chr7 - 1383 7 full-splice_match TMEM176B ENST00000326442.9 1129 7 -279 25 no_subtype FALSE canonical NA NA 346 None 12 4 0 FALSE 0 0 NA A coding 270 810 352 1161 PB.4077.10 chr6 - 3001 7 novel_not_in_catalog CD164 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 265 None 2 28 2 TRUE 0 0 NA C coding 193 579 91 669 PB.4195.1 chr6 + 1588 8 full-splice_match PCMT1 ENST00000367384.6 1938 8 340 10 no_subtype FALSE canonical NA NA 793 None 44 3 0 FALSE 0 0 NA C coding 228 684 120 803 PB.4195.2 chr6 + 1667 8 full-splice_match PCMT1 ENST00000464889.5 1984 8 302 15 no_subtype FALSE canonical NA NA 877 None 27 4 0 FALSE 0 0 NA C coding 227 681 157 837 PB.1266.2 chr2 + 2726 19 novel_not_in_catalog TTC27 novel NA NA NA NA no_subtype FALSE canonical NA NA 2498 None 2 7 1 FALSE 0 0 NA B coding 475 1425 1194 2618 PB.8530.2 chr16 - 2834 13 novel_not_in_catalog RABEP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 582 None 2 6 0 TRUE 0 0 NA B coding 239 717 1597 2313 PB.8530.1 chr16 - 2786 14 novel_not_in_catalog RABEP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 619 None 66 6 0 TRUE 0 0 NA B coding 569 1707 559 2265 PB.1266.1 chr2 + 2831 20 novel_not_in_catalog TTC27 novel NA NA NA NA no_subtype FALSE canonical NA NA 2603 None 29 2 1 FALSE 0 0 NA B coding 508 1524 1200 2723 PB.4028.1 chr6 - 2618 16 full-splice_match RNGTT ENST00000369485.8 4553 16 104 1831 no_subtype TRUE canonical NA NA 272 None 9 13 0 FALSE 0 0 NA A coding 597 1791 209 1999 PB.3542.1 chr5 - 2258 1 full-splice_match TAF7 ENST00000313368.7 2334 1 67 9 no_subtype FALSE canonical NA NA NA None 6 5 0 FALSE 0 0 NA A coding 349 1047 711 1757 PB.3648.1 chr5 - 2010 4 full-splice_match DUSP1 ENST00000239223.3 2019 4 -2 11 no_subtype FALSE canonical NA NA 612 None 16 3 0 FALSE 0 0 NA A coding 367 1101 246 1346 PB.720.2 chr1 - 3734 21 novel_in_catalog THBS3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 127 None 2 6 1 FALSE 0 0 NA C coding 260 780 1248 2027 PB.4076.1 chr6 - 1517 1 incomplete-splice_match CD164 ENST00000413644.6 2414 7 892 6 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.11166.3 chrX + 3263 2 genic_intron novelGene_1163 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3224 None 2 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11046.5 chrX - 3263 8 novel_not_in_catalog ATRX novel NA NA NA NA no_subtype FALSE non_canonical NA NA 238 None 2 2 1 TRUE 0 0 NA B coding 835 2505 758 3262 PB.11046.6 chrX - 3083 10 novel_in_catalog ATRX novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 229 None 2 0 0 FALSE 0 0 NA B coding 958 2874 210 3083 PB.11046.1 chrX - 3096 8 incomplete-splice_match ATRX ENST00000395603.7 10218 34 -3 7125 internal_fragment FALSE canonical NA NA 238 None 14 0 0 FALSE 0 0 NA B coding 959 2877 219 3095 PB.2986.1 chr4 - 1612 16 incomplete-splice_match CENPE ENST00000503705.5 3468 26 29 1827 internal_fragment FALSE canonical NA NA 116 None 4 0 0 FALSE 0 0 NA A coding 517 1551 61 1611 PB.11046.3 chrX - 1479 9 novel_in_catalog ATRX novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 235 None 19 0 0 FALSE 0 0 NA B coding 421 1263 216 1478 PB.6614.1 chr11 - 2591 2 genic_intron novelGene_940 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2271 None 5 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7407.1 chr13 + 1303 9 full-splice_match GTF3A ENST00000381140.8 1383 9 75 5 no_subtype FALSE canonical NA NA 1052 None 7 0 0 FALSE 0 0 NA A coding 130 390 825 1214 PB.2794.1 chr4 + 5412 4 novel_not_in_catalog TBC1D1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5257 None 2 36 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.1978.5 chr3 + 2555 1 novel_in_catalog ARL8B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3400.1 chr5 - 1729 8 full-splice_match GIN1 ENST00000399004.6 3229 8 11 1489 no_subtype FALSE canonical NA NA 77 None 4 3 0 FALSE 0 0 NA A coding 522 1566 85 1650 PB.5067.1 chr8 - 3914 12 novel_not_in_catalog NUDCD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 210 None 2 14 1 TRUE 0 0 NA B coding 583 1749 93 1841 PB.1978.1 chr3 + 2920 7 novel_not_in_catalog ARL8B novel NA NA NA NA no_subtype FALSE canonical NA NA 670 None 126 11 1 FALSE 0 0 NA B coding 155 465 156 620 PB.1978.3 chr3 + 1520 2 genic_intron novelGene_37 novel NA NA NA NA no_subtype TRUE canonical NA NA 259 None 2 13 1 FALSE 0 0 NA A coding 106 318 768 1085 PB.71.1 chr1 + 2838 2 genic_intron novelGene_133 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1557 None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6945.1 chr12 - 3552 5 full-splice_match ARF3 ENST00000256682.8 4105 5 65 488 no_subtype FALSE canonical NA NA 177 None 41 20 0 FALSE 0 0 NA C coding 181 543 271 813 PB.1466.1 chr2 - 1007 7 novel_not_in_catalog CD8B novel NA NA NA NA no_subtype FALSE canonical NA NA 77 None 2 7 0 TRUE 0 0 NA B coding 243 729 35 763 PB.3857.2 chr6 + 1806 6 novel_not_in_catalog HMGA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 411 None 5 6 1 TRUE 0 0 NA C coding 107 321 142 462 PB.3857.3 chr6 + 1810 6 novel_not_in_catalog HMGA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 411 None 3 9 2 TRUE 0 0 NA C coding 96 288 175 462 PB.3857.1 chr6 + 1826 5 full-splice_match HMGA1 ENST00000447654.5 2159 5 331 2 no_subtype FALSE canonical NA NA 428 None 64 4 0 FALSE 0 0 NA C coding 107 321 159 479 PB.3857.6 chr6 + 1794 5 full-splice_match HMGA1 ENST00000447654.5 2159 5 364 1 no_subtype FALSE canonical NA NA 395 None 7 4 0 FALSE 0 0 NA C coding 107 321 126 446 PB.3857.7 chr6 + 1529 3 incomplete-splice_match HMGA1 ENST00000347617.10 1773 5 241 3 internal_fragment FALSE canonical NA NA 131 None 5 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3857.4 chr6 + 1830 6 novel_not_in_catalog HMGA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 432 None 2 8 2 FALSE 0 0 NA C coding 107 321 163 483 PB.3857.5 chr6 + 1855 6 full-splice_match HMGA1 ENST00000401473.7 1887 6 32 0 no_subtype FALSE canonical NA NA 454 None 16 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9833.2 chr19 + 1615 2 antisense novelGene_BRD4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 977 None 8 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9833.1 chr19 + 1618 2 antisense novelGene_BRD4_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 999 None 2 12 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.9874.1 chr19 + 2867 1 full-splice_match CTB-52I2.4 ENST00000614660.1 1401 1 -73 -1393 no_subtype FALSE canonical NA NA NA None 60 8 0 FALSE 0 0 NA A coding 175 525 533 1057 PB.3316.1 chr5 - 1580 1 antisense novelGene_MAP1B_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2513.5 chr3 - 1630 1 genic_intron novelGene_1210 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4131.1 chr6 - 2869 13 novel_not_in_catalog MOXD1 novel NA NA NA NA no_subtype TRUE canonical NA NA 325 None 33 7 0 TRUE 0 0 NA A coding 613 1839 62 1900 PB.3223.1 chr5 - 4607 9 full-splice_match PRKAA1 ENST00000397128.6 5088 9 30 451 no_subtype FALSE canonical NA NA 106 None 4 19 0 FALSE 0 0 NA C coding 550 1650 7 1656 PB.3223.2 chr5 - 1722 1 novel_in_catalog PRKAA1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C coding 101 303 22 324 PB.7685.1 chr14 - 1583 14 incomplete-splice_match NEMF ENST00000298310.9 6234 33 177 4474 internal_fragment FALSE canonical NA NA 332 None 10 2 0 FALSE 0 0 NA A coding 436 1308 274 1581 PB.5398.4 chr9 - 5739 6 novel_not_in_catalog TBC1D2 novel NA NA NA NA no_subtype FALSE canonical NA NA 482 None 3 33 0 TRUE 0 0 NA B coding 348 1044 114 1157 PB.2906.1 chr4 + 3435 3 full-splice_match BMP3 ENST00000282701.2 5734 3 -206 2505 no_subtype FALSE canonical NA NA 1753 None 10 7 0 FALSE 0 0 NA C coding 472 1416 527 1942 PB.7051.1 chr12 - 3523 23 novel_not_in_catalog STAT6 novel NA NA NA NA no_subtype FALSE canonical NA NA 225 None 183 7 1 TRUE 0 0 NA B coding 847 2541 247 2787 PB.8853.2 chr17 - 7453 25 novel_not_in_catalog ANKFY1 novel NA NA NA NA no_subtype FALSE canonical NA NA 195 None 2 26 0 TRUE 0 0 NA B coding 1156 3468 32 3499 PB.8853.1 chr17 - 2831 1 genic ANKFY1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 23 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10671.6 chr22 + 2596 4 novel_not_in_catalog ADORA2A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 829 None 5 10 2 TRUE 0 0 NA C coding 412 1236 498 1733 PB.7863.1 chr14 - 2719 12 novel_not_in_catalog TC2N novel NA NA NA NA no_subtype FALSE canonical NA NA 388 None 2 8 0 FALSE 0 0 NA C coding 490 1470 445 1914 PB.8800.1 chr16 - 680 6 full-splice_match CYBA ENST00000261623.7 797 6 107 10 no_subtype FALSE canonical NA NA 90 None 8 3 0 FALSE 0 0 NA A coding 195 585 33 617 PB.5599.1 chr9 - 1940 5 full-splice_match SURF6 ENST00000372022.5 4447 5 222 2285 no_subtype TRUE canonical NA NA 138 None 10 10 0 FALSE 0 0 NA A coding 361 1083 45 1127 PB.3660.1 chr5 + 1440 11 novel_not_in_catalog FAF2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1196 None 9 2 1 FALSE 0 0 NA A coding 306 918 459 1376 PB.8877.1 chr17 - 1128 6 novel_not_in_catalog C1QBP novel NA NA NA NA no_subtype FALSE canonical NA NA 273 None 2 7 1 FALSE 0 0 NA A coding 128 384 42 425 PB.9112.1 chr17 + 1645 4 full-splice_match IGFBP4 ENST00000269593.4 2200 4 547 8 no_subtype FALSE canonical NA NA 370 None 6 6 0 FALSE 0 0 NA A coding 165 495 8 502 PB.5991.1 chr10 - 1129 11 novel_not_in_catalog CUEDC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 80 None 2 2 0 TRUE 0 0 NA B coding 287 861 91 951 PB.4012.1 chr6 + 2831 5 novel_in_catalog DOPEY1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 602 None 4 9 0 FALSE 0 0 NA A coding 241 723 112 834 PB.4801.1 chr8 - 3194 2 genic_intron novelGene_107 novel NA NA NA NA no_subtype FALSE canonical NA NA 318 None 2 19 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4438.1 chr7 + 1977 6 full-splice_match TPST1 ENST00000304842.5 2116 6 138 1 no_subtype FALSE canonical NA NA 1429 None 2 5 0 FALSE 0 0 NA A coding 370 1110 288 1397 PB.4718.1 chr7 + 2620 18 novel_not_in_catalog AGK novel NA NA NA NA no_subtype TRUE canonical NA NA 2154 None 13 13 1 TRUE 0 0 NA B coding 422 1266 40 1305 PB.10712.4 chr22 - 1917 5 incomplete-splice_match PISD ENST00000437808.5 2264 7 353 -6 5prime_fragment FALSE canonical NA NA 138 None 2 14 0 FALSE 0 0 NA C coding 259 777 31 807 PB.10712.3 chr22 - 2955 9 novel_in_catalog PISD novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 86 None 2 14 0 FALSE 0 0 NA C coding 250 750 1095 1844 PB.4058.10 chr6 - 2681 1 genic_intron novelGene_966 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6177.3 chr11 + 1993 2 novel_in_catalog ILK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 53 None 2 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6177.1 chr11 + 1684 13 full-splice_match ILK ENST00000420936.6 1692 13 38 -30 no_subtype FALSE canonical NA NA 1282 None 157 0 0 FALSE 0 0 NA C coding 452 1356 74 1429 PB.6471.1 chr11 + 1586 2 genic_intron novelGene_628 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1477 None 4 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4990.6 chr8 - 4431 10 novel_not_in_catalog PAG1 novel NA NA NA NA no_subtype FALSE canonical NA NA 434 None 3 19 1 FALSE 0 0 NA C coding 432 1296 771 2066 PB.2571.1 chr3 + 2696 7 novel_in_catalog MYNN novel NA NA NA NA no_combination_of_known_junctions TRUE canonical NA NA 1575 None 4 11 0 FALSE 0 0 NA C coding 582 1746 90 1835 PB.10100.1 chr19 + 4444 11 novel_not_in_catalog SNRNP70 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3645 None 2 19 2 TRUE 0 0 NA B coding 339 1017 3268 4284 PB.10100.2 chr19 + 1661 10 novel_not_in_catalog SNRNP70 novel NA NA NA NA no_subtype FALSE canonical NA NA 854 None 13 1 0 FALSE 0 0 NA B coding 437 1311 190 1500 PB.10100.3 chr19 + 2673 9 novel_not_in_catalog SNRNP70 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1666 None 6 5 1 TRUE 0 0 NA B coding 166 498 190 687 PB.10100.4 chr19 + 4126 11 novel_not_in_catalog SNRNP70 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3338 None 4 9 1 TRUE 0 0 NA B coding 332 996 2962 3957 PB.10100.5 chr19 + 4142 11 novel_not_in_catalog SNRNP70 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3340 None 13 10 1 TRUE 0 0 NA B coding 341 1023 2964 3986 PB.8552.1 chr16 - 1790 9 full-splice_match MAPK3 ENST00000263025.8 1861 9 60 11 no_subtype FALSE canonical NA NA 195 None 30 3 0 FALSE 0 0 NA A coding 379 1137 26 1162 PB.10100.7 chr19 + 1720 11 novel_not_in_catalog SNRNP70 novel NA NA NA NA no_subtype FALSE canonical NA NA 914 None 2 1 0 FALSE 0 0 NA B coding 122 366 1195 1560 PB.10100.9 chr19 + 3112 12 novel_not_in_catalog SNRNP70 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2306 None 2 8 1 TRUE 0 0 NA B coding 122 366 2587 2952 PB.2571.3 chr3 + 2788 8 full-splice_match MYNN ENST00000349841.9 4999 8 574 1637 no_subtype FALSE canonical NA NA 1659 None 2 10 0 FALSE 0 0 NA C coding 610 1830 90 1919 PB.65.1 chr1 + 3019 2 antisense novelGene_DHRS3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 407 None 34 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6664.1 chr11 - 1886 6 full-splice_match MPZL2 ENST00000278937.6 2620 6 -15 749 no_subtype FALSE canonical NA NA 202 None 42 5 1 FALSE 0 0 NA A coding 215 645 145 789 PB.6451.4 chr11 + 2850 22 full-splice_match SF3B2 ENST00000322535.10 2903 22 25 28 no_subtype FALSE canonical NA NA 2640 None 532 1 0 FALSE 0 0 NA A coding 895 2685 25 2709 PB.1506.1 chr2 + 1304 5 novel_in_catalog EIF5B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1085 None 2 4 0 FALSE 0 0 NA B coding 379 1137 167 1303 PB.6945.2 chr12 - 2091 1 incomplete-splice_match ARF3 ENST00000256682.8 4105 5 1526 489 no_subtype FALSE canonical NA NA NA None 6 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7224.1 chr12 - 3837 3 full-splice_match CMKLR1 ENST00000312143.11 5283 3 6 1440 no_subtype FALSE canonical NA NA 285 None 6 6 0 FALSE 0 0 NA A coding 371 1113 365 1477 PB.191.1 chr1 - 873 6 novel_not_in_catalog IFI6 novel NA NA NA NA no_subtype FALSE canonical NA NA 67 None 2 3 0 FALSE 0 0 NA C coding 130 390 176 565 PB.2217.1 chr3 - 2071 2 full-splice_match TMEM115 ENST00000266025.3 2197 2 115 11 no_subtype FALSE canonical NA NA 1283 None 10 1 0 FALSE 0 0 NA A coding 351 1053 433 1485 PB.191.2 chr1 - 796 5 full-splice_match IFI6 ENST00000361157.10 841 5 30 15 no_subtype FALSE canonical NA NA 66 None 21 2 0 FALSE 0 0 NA C coding 130 390 99 488 PB.191.5 chr1 - 3235 4 novel_not_in_catalog IFI6 novel NA NA NA NA no_subtype FALSE canonical NA NA 70 None 4 21 0 TRUE 0 0 NA C coding 148 444 103 546 PB.191.4 chr1 - 2550 4 novel_in_catalog IFI6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 70 None 2 19 0 FALSE 0 0 NA C coding 129 387 103 489 PB.191.6 chr1 - 1715 1 novel_in_catalog IFI6 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6167.1 chr11 - 3405 12 full-splice_match FAM160A2 ENST00000265978.8 3481 12 74 2 no_subtype TRUE canonical NA NA 94 None 4 2 0 FALSE 0 0 NA C coding 949 2847 397 3243 PB.6167.2 chr11 - 5651 7 novel_in_catalog FAM160A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 866 None 2 19 0 FALSE 0 0 NA C coding 552 1656 831 2486 PB.3486.2 chr5 + 6117 12 full-splice_match JADE2 ENST00000282605.8 2748 12 31 -3400 no_subtype FALSE canonical NA NA 1736 None 3 10 1 FALSE 0 0 NA C coding 834 2502 56 2557 PB.9598.1 chr18 + 1470 8 full-splice_match SERPINB10 ENST00000238508.7 2122 8 -10 662 no_subtype FALSE canonical NA NA 858 None 8 1 0 FALSE 0 0 NA A coding 397 1191 70 1260 PB.7039.2 chr12 - 4492 26 full-splice_match PAN2 ENST00000440411.7 4576 26 65 19 no_subtype TRUE canonical NA NA 127 None 6 3 0 FALSE 0 0 NA A coding 1198 3594 242 3835 PB.8224.2 chr15 - 1297 13 novel_not_in_catalog ETFA novel NA NA NA NA no_subtype TRUE canonical NA NA 80 None 2 1 0 TRUE 0 0 NA C coding 333 999 42 1040 PB.4978.1 chr8 + 1063 3 full-splice_match TMEM70 ENST00000312184.5 2018 3 -39 994 no_subtype FALSE canonical NA NA 428 None 3 2 0 FALSE 0 0 NA A coding 260 780 113 892 PB.10627.1 chr22 + 1453 4 full-splice_match MRPL40 ENST00000333130.3 1387 4 -71 5 no_subtype FALSE canonical NA NA 1020 None 4 2 0 FALSE 0 0 NA A coding 162 486 857 1342 PB.6204.3 chr11 + 4233 25 full-splice_match CTR9 ENST00000361367.6 4586 25 347 6 no_subtype FALSE canonical NA NA 3174 None 11 4 0 FALSE 0 0 NA C coding 1173 3519 80 3598 PB.6204.2 chr11 + 2997 22 incomplete-splice_match CTR9 ENST00000361367.6 4586 25 291 1298 3prime_fragment FALSE canonical NA NA 2862 None 16 0 0 FALSE 0 0 NA C coding 954 2862 136 2997 PB.6204.1 chr11 + 2825 21 incomplete-splice_match CTR9 ENST00000361367.6 4586 25 291 1470 3prime_fragment TRUE canonical NA NA 2715 None 14 0 0 FALSE 0 0 NA C coding 896 2688 136 2823 PB.4041.1 chr6 - 1431 1 genic_intron novelGene_897 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7411.1 chr13 - 3475 24 full-splice_match FLT3 ENST00000241453.11 3842 24 18 349 no_subtype FALSE canonical NA NA 107 None 5 3 1 FALSE 0 0 NA A coding 993 2979 65 3043 PB.1012.2 chr1 - 4247 12 novel_not_in_catalog PIGR novel NA NA NA NA no_subtype FALSE non_canonical NA NA 131 None 1008 12 1 TRUE 0 0 NA C coding 764 2292 185 2476 PB.10776.1 chr22 + 5829 10 novel_not_in_catalog GRAP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5248 None 19 19 1 TRUE 0 0 NA C coding 330 990 239 1228 PB.10776.3 chr22 + 3130 8 full-splice_match GRAP2 ENST00000344138.8 3893 8 93 670 no_subtype FALSE canonical NA NA 983 None 8 9 0 FALSE 0 0 NA C coding 330 990 171 1160 PB.10776.2 chr22 + 1853 6 novel_in_catalog GRAP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 697 None 2 14 0 FALSE 0 0 NA C coding 262 786 239 1024 PB.1012.9 chr1 - 2999 12 novel_not_in_catalog PIGR novel NA NA NA NA no_subtype FALSE non_canonical NA NA 130 None 8 6 0 TRUE 0 0 NA C coding 764 2292 184 2475 PB.8332.2 chr15 - 2750 5 novel_in_catalog VIMP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 119 None 2 15 0 FALSE 0 0 NA C coding 165 495 44 538 PB.10055.1 chr19 - 1564 2 antisense novelGene_BLOC1S3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 40 None 2 13 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.6459.1 chr11 - 1086 8 full-splice_match YIF1A ENST00000376901.8 1124 8 36 2 no_subtype FALSE canonical NA NA 180 None 2 0 0 FALSE 0 0 NA A coding 293 879 150 1028 PB.2052.1 chr3 + 1410 6 full-splice_match UBE2E1 ENST00000306627.7 1511 6 89 12 no_subtype FALSE canonical NA NA 614 None 5 3 0 FALSE 0 0 NA A coding 193 579 131 709 PB.2052.2 chr3 + 3396 1 genic_intron novelGene_224 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 36 0 FALSE 0 0 NA A coding 136 408 1592 1999 PB.8564.3 chr16 + 1562 10 full-splice_match PHKG2 ENST00000563588.5 5539 10 161 3816 no_subtype FALSE canonical NA NA 1005 None 20 2 0 FALSE 0 0 NA C coding 406 1218 79 1296 PB.8564.4 chr16 + 1487 9 novel_in_catalog PHKG2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 946 None 5 1 0 FALSE 0 0 NA C coding 406 1218 20 1237 PB.5160.2 chr8 - 7393 2 incomplete-splice_match PLEC ENST00000398774.6 14646 32 7250 3 5prime_fragment FALSE canonical NA NA 153 None 3 5 0 FALSE 0 0 NA B coding 2072 6216 154 6369 PB.9298.1 chr17 - 3067 6 novel_not_in_catalog ICAM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 139 None 50 9 1 TRUE 0 0 NA C coding 275 825 184 1008 PB.3216.17 chr5 - 4321 1 genic_intron novelGene_391 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6783.5 chr12 + 1368 9 novel_not_in_catalog GAPDH novel NA NA NA NA no_subtype FALSE canonical NA NA 1101 None 2 4 1 FALSE 0 0 NA B coding 335 1005 164 1168 PB.4121.3 chr6 - 1419 11 incomplete-splice_match ARHGAP18 ENST00000368149.2 4462 15 52 2991 internal_fragment FALSE canonical NA NA 150 None 7 1 0 FALSE 0 0 NA C coding 460 1380 38 1417 PB.5547.3 chr9 + 1651 1 incomplete-splice_match SET ENST00000372692.8 2850 8 1185 15 no_subtype FALSE canonical NA NA NA None 84 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1283.1 chr2 - 2834 3 novel_not_in_catalog CYP1B1 novel NA NA NA NA no_subtype FALSE canonical NA NA 412 None 7 4 0 FALSE 0 0 NA C coding 548 1644 399 2042 PB.6445.2 chr11 - 1431 4 novel_not_in_catalog CFL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 419 None 6 9 0 FALSE 0 0 NA C coding 149 447 468 914 PB.10327.2 chr20 - 2044 15 novel_not_in_catalog CDK5RAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 62 None 2 2 0 TRUE 0 0 NA B coding 587 1761 83 1843 PB.10327.1 chr20 - 2936 15 novel_not_in_catalog CDK5RAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 81 None 2 5 0 TRUE 0 0 NA B coding 308 924 102 1025 PB.592.3 chr1 - 3931 19 novel_not_in_catalog CSDE1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 91 None 2 22 2 TRUE 0 0 NA C coding 668 2004 676 2679 PB.6656.2 chr11 + 2595 1 incomplete-splice_match PAFAH1B2 ENST00000527958.5 4198 6 1600 4 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4380.1 chr7 + 1306 9 full-splice_match STARD3NL ENST00000009041.11 1728 9 150 272 no_subtype FALSE canonical NA NA 829 None 14 1 0 FALSE 0 0 NA A coding 234 702 108 809 PB.4718.5 chr7 + 2635 17 novel_not_in_catalog AGK novel NA NA NA NA no_subtype FALSE canonical NA NA 2295 None 7 9 1 TRUE 0 0 NA B coding 330 990 457 1446 PB.6656.1 chr11 + 4151 6 full-splice_match PAFAH1B2 ENST00000527958.5 4198 6 39 8 no_subtype FALSE canonical NA NA 531 None 56 19 0 FALSE 0 0 NA C coding 229 687 121 807 PB.156.1 chr1 - 1624 1 genic_intron novelGene_247 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2640.2 chr3 - 1369 5 full-splice_match TMEM41A ENST00000421852.5 2827 5 42 1416 no_subtype FALSE canonical NA NA 173 None 2 3 0 FALSE 0 0 NA C coding 264 792 55 846 PB.2316.1 chr3 + 1557 2 antisense novelGene_CGGBP1_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 177 None 2 5 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6656.5 chr11 + 1108 5 full-splice_match TAGLN ENST00000392951.8 928 5 52 -232 no_subtype FALSE canonical NA NA 533 None 18 3 0 FALSE 0 0 NA A coding 201 603 73 675 PB.3743.2 chr6 + 2697 1 genic_intron novelGene_99 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7490.3 chr13 + 3045 15 full-splice_match SETDB2 ENST00000354234.8 6139 15 -64 3158 no_subtype FALSE canonical NA NA 2931 None 7 5 0 FALSE 0 0 NA C coding 718 2154 890 3043 PB.4269.1 chr7 + 2018 1 novel_in_catalog CHST12 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 32 6 0 FALSE 0 0 NA B coding 414 1242 80 1321 PB.7390.1 chr13 + 1615 4 full-splice_match SAP18 ENST00000607003.5 2234 4 17 602 no_subtype FALSE canonical NA NA 320 None 26 10 0 FALSE 0 0 NA A coding 153 459 16 474 PB.5896.1 chr10 - 1346 9 full-splice_match ACTA2 ENST00000224784.10 1349 9 0 3 no_subtype FALSE canonical NA NA 43 None 23 0 0 FALSE 0 0 NA C coding 377 1131 67 1197 PB.7863.4 chr14 - 1552 1 genic_intron novelGene_839 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5896.3 chr10 - 3792 5 novel_in_catalog ACTA2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 39 None 2 14 0 FALSE 0 0 NA C coding 154 462 63 524 PB.5896.2 chr10 - 2876 8 novel_in_catalog ACTA2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 43 None 2 3 0 FALSE 0 0 NA C coding 211 633 67 699 PB.8187.1 chr15 - 1910 16 incomplete-splice_match UACA ENST00000322954.10 6939 19 68 4961 internal_fragment FALSE canonical NA NA 196 None 9 1 0 FALSE 0 0 NA A coding 597 1791 119 1909 PB.10496.1 chr21 - 2840 1 novel_in_catalog U2AF1L5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3935.1 chr6 + 3758 4 novel_not_in_catalog ABCC10 novel NA NA NA NA no_subtype FALSE canonical NA NA 2750 None 2 18 1 TRUE 0 0 NA B coding 503 1509 226 1734 PB.11224.1 chrX - 2529 7 novel_not_in_catalog CLIC2 novel NA NA NA NA no_subtype TRUE canonical NA NA 188 None 13 6 1 TRUE 0 0 NA C coding 247 741 132 872 PB.3209.1 chr5 + 1768 9 incomplete-splice_match NIPBL ENST00000282516.12 10435 47 7216 1451 internal_fragment FALSE canonical NA NA 1332 None 2 0 0 FALSE 0 0 NA B coding 557 1671 25 1695 PB.1268.1 chr2 + 2792 18 full-splice_match RASGRP3 ENST00000403687.7 4807 18 402 1613 no_subtype FALSE canonical NA NA 2402 None 2 7 0 FALSE 0 0 NA C coding 690 2070 339 2408 PB.5454.1 chr9 + 1479 6 full-splice_match BSPRY ENST00000374183.4 2339 6 5 855 no_subtype FALSE canonical NA NA 716 None 3 3 0 FALSE 0 0 NA A coding 402 1206 35 1240 PB.1268.3 chr2 + 1482 1 incomplete-splice_match RASGRP3 ENST00000402538.7 4738 19 3205 52 no_subtype FALSE canonical NA NA NA None 4 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5541.3 chr9 + 2896 14 novel_not_in_catalog SLC27A4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2008 None 3 9 1 TRUE 0 0 NA B coding 643 1929 235 2163 PB.9011.1 chr17 + 3873 1 antisense novelGene_SEZ6_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10637.1 chr22 + 2903 1 novel_in_catalog TANGO2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7562.3 chr13 + 3945 29 full-splice_match TPP2 ENST00000376065.8 3931 29 -18 4 no_subtype FALSE canonical NA NA 3714 None 2 0 0 FALSE 0 0 NA C coding 1249 3747 55 3801 PB.4962.1 chr8 - 1425 1 incomplete-splice_match NCOA2 ENST00000452400.6 8447 23 7007 16 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6604.10 chr11 - 2873 11 novel_not_in_catalog CCDC82 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 288 None 2 15 0 TRUE 0 0 NA B coding 521 1563 441 2003 PB.8659.3 chr16 - 3723 12 novel_in_catalog DYNC1LI2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 118 None 5 11 0 FALSE 0 0 NA C coding 310 930 12 941 PB.8659.2 chr16 - 1604 13 full-splice_match DYNC1LI2 ENST00000258198.6 4515 13 196 2715 no_subtype FALSE canonical NA NA 118 None 37 0 0 FALSE 0 0 NA C coding 492 1476 12 1487 PB.1076.3 chr1 - 3222 11 incomplete-splice_match LBR ENST00000272163.8 3745 14 518 5 5prime_fragment FALSE canonical NA NA 28 None 2 6 0 FALSE 0 0 NA C coding 397 1191 233 1423 PB.10291.2 chr20 - 3035 1 genic_intron novelGene_190 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 15 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4176.2 chr6 - 3351 7 novel_in_catalog PLAGL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 298 None 17 13 0 FALSE 0 0 NA C coding 463 1389 841 2229 PB.3520.1 chr5 + 2836 1 full-splice_match PURA ENST00000331327.4 11497 1 2453 6208 no_subtype FALSE canonical NA NA NA None 6 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3462.4 chr5 - 2624 23 novel_not_in_catalog ACSL6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 139 None 14 2 1 TRUE 0 0 NA B coding 697 2091 214 2304 PB.4823.1 chr8 + 3798 20 full-splice_match BMP1 ENST00000306385.9 4229 20 427 4 no_subtype TRUE canonical NA NA 3069 None 3 8 0 FALSE 0 0 NA A coding 986 2958 244 3201 PB.9192.1 chr17 + 3267 6 full-splice_match GOSR2 ENST00000393456.6 847 6 24 -2444 no_subtype FALSE canonical NA NA 510 None 64 19 0 FALSE 0 0 NA A coding 212 636 34 669 PB.3215.1 chr5 - 1576 14 novel_in_catalog RICTOR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 65 None 2 3 1 FALSE 0 0 NA A coding 421 1263 17 1279 PB.9323.2 chr17 + 1980 8 full-splice_match AMZ2 ENST00000577866.5 1492 8 -424 -64 no_subtype FALSE canonical NA NA 1639 None 7 5 0 FALSE 0 0 NA C coding 360 1080 713 1792 PB.10597.1 chr21 - 1137 7 full-splice_match C21orf2 ENST00000325223.7 1283 7 145 1 no_subtype FALSE canonical NA NA 140 None 3 4 1 FALSE 0 0 NA A coding 255 765 64 828 PB.7562.2 chr13 + 3063 25 novel_not_in_catalog TPP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3006 None 6 0 0 TRUE 0 0 NA C coding 1003 3009 55 3063 PB.9323.1 chr17 + 1566 9 novel_not_in_catalog AMZ2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1228 None 2 4 1 FALSE 0 0 NA C coding 360 1080 302 1381 PB.6254.1 chr11 + 1233 11 full-splice_match EIF3M ENST00000531120.5 5051 11 17 3801 no_subtype FALSE canonical NA NA 1050 None 16 2 0 FALSE 0 0 NA C coding 374 1122 47 1168 PB.6254.2 chr11 + 3090 1 novel_in_catalog EIF3M novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2346.1 chr3 + 2233 5 full-splice_match PCNP ENST00000265260.7 2342 5 105 4 no_subtype FALSE canonical NA NA 426 None 6 8 0 FALSE 0 0 NA C coding 178 534 17 550 PB.2346.2 chr3 + 2176 5 full-splice_match PCNP ENST00000460231.5 2165 5 11 -22 no_subtype FALSE canonical NA NA 373 None 8 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2346.3 chr3 + 1517 1 incomplete-splice_match PCNP ENST00000469941.5 2028 4 507 5 no_subtype FALSE canonical NA NA NA None 4 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6779.1 chr12 - 2107 10 full-splice_match TNFRSF1A ENST00000162749.6 2223 10 89 27 no_subtype FALSE canonical NA NA 250 None 35 8 0 FALSE 0 0 NA A coding 455 1365 212 1576 PB.3110.1 chr4 - 3532 2 full-splice_match C4orf46 ENST00000379205.4 3521 2 -12 1 no_subtype FALSE canonical NA NA 443 None 3 26 0 FALSE 0 0 NA A coding 113 339 258 596 PB.4930.1 chr8 - 3377 2 genic_intron novelGene_542 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 488 None 2 30 1 FALSE 0 0 NA A coding 100 300 447 746 PB.6506.19 chr11 - 7290 26 novel_in_catalog NUMA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 257 None 2 10 0 FALSE 0 0 NA B coding 2115 6345 290 6634 PB.3573.2 chr5 + 3669 3 full-splice_match SLC26A2 ENST00000286298.4 8080 3 27 4384 no_subtype FALSE canonical NA NA 940 None 2 9 0 FALSE 0 0 NA C coding 739 2217 242 2458 PB.7733.1 chr14 + 1838 1 genic_intron novelGene_561 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A coding 112 336 1316 1651 PB.7959.171 chr14 - 1539 11 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 75 None 2 16 5 TRUE 0 0 NA B coding 196 588 817 1404 PB.7562.1 chr13 + 3487 29 novel_not_in_catalog TPP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3409 None 9 1 0 TRUE 0 0 NA C coding 1153 3459 29 3487 PB.10164.10 chr19 - 2032 13 novel_not_in_catalog LILRB3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 115 None 4 10 3 TRUE 0 0 NA A coding 346 1038 82 1119 PB.6506.12 chr11 - 7216 27 novel_not_in_catalog NUMA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 172 None 26 4 0 TRUE 0 0 NA B coding 2115 6345 210 6554 PB.6506.13 chr11 - 7369 27 novel_not_in_catalog NUMA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 124 None 2 30 0 TRUE 0 0 NA B coding 1564 4692 162 4853 PB.6506.14 chr11 - 7248 25 novel_in_catalog NUMA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 252 None 6 5 0 FALSE 0 0 NA B coding 2101 6303 285 6587 PB.6506.15 chr11 - 7244 26 novel_not_in_catalog NUMA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 206 None 3 5 1 FALSE 0 0 NA B coding 2115 6345 239 6583 PB.10164.11 chr19 - 3052 12 fusion LILRA6,LILRB3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 17 None 2 14 2 TRUE 0 0 NA B coding 259 777 245 1021 PB.6812.5 chr12 - 2913 6 novel_in_catalog M6PR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 165 None 5 13 0 FALSE 0 0 NA C coding 244 732 167 898 PB.7773.10 chr14 - 6055 33 novel_not_in_catalog ZFYVE26 novel NA NA NA NA no_subtype TRUE canonical NA NA 55 None 2 17 1 TRUE 0 0 NA B coding 1739 5217 226 5442 PB.1807.1 chr2 - 1686 13 full-splice_match WDR12 ENST00000261015.4 8100 13 553 5861 no_subtype FALSE canonical NA NA 238 None 10 3 0 FALSE 0 0 NA A coding 423 1269 198 1466 PB.1031.1 chr1 + 1826 11 full-splice_match RCOR3 ENST00000367006.8 2525 11 117 582 no_subtype FALSE canonical NA NA 1240 None 4 2 0 FALSE 0 0 NA C coding 432 1296 178 1473 PB.10164.13 chr19 - 1998 14 fusion LILRA6,LILRB3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 100 None 10 4 2 TRUE 0 0 NA B coding 346 1038 67 1104 PB.6765.1 chr12 + 3073 11 full-splice_match TULP3 ENST00000448120.6 3076 11 -6 9 no_subtype FALSE canonical NA NA 1252 None 4 22 0 FALSE 0 0 NA A coding 442 1326 58 1383 PB.946.17 chr1 + 1553 12 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 915 None 5 4 0 TRUE 0 0 NA B coding 322 966 87 1052 PB.1399.1 chr2 + 3241 6 full-splice_match MXD1 ENST00000264444.6 5587 6 39 2307 no_subtype FALSE canonical NA NA 699 None 232 13 0 FALSE 0 0 NA C coding 221 663 222 884 PB.3126.1 chr4 + 4034 12 full-splice_match CLCN3 ENST00000613795.4 5874 12 180 1660 no_subtype FALSE canonical NA NA 2413 None 11 8 0 FALSE 0 0 NA C coding 791 2373 129 2501 PB.512.1 chr1 + 2762 12 full-splice_match MFSD14A ENST00000370152.7 2777 12 9 6 no_subtype FALSE canonical NA NA 1393 None 84 5 0 FALSE 0 0 NA C coding 490 1470 128 1597 PB.2622.2 chr3 - 1349 10 full-splice_match PARL ENST00000317096.8 1414 10 56 9 no_subtype FALSE canonical NA NA 130 None 20 6 0 FALSE 0 0 NA C coding 379 1137 6 1142 PB.512.4 chr1 + 1572 5 novel_in_catalog MFSD14A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 494 None 2 4 0 FALSE 0 0 NA C coding 181 543 124 666 PB.8204.5 chr15 + 1752 13 novel_in_catalog CLK3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1344 None 2 2 0 FALSE 0 0 NA C coding 490 1470 49 1518 PB.8204.4 chr15 + 3895 11 novel_in_catalog CLK3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3488 None 2 2 0 FALSE 0 0 NA C coding 343 1029 2634 3662 PB.11214.5 chrX - 2201 14 novel_not_in_catalog G6PD novel NA NA NA NA no_subtype FALSE canonical NA NA 57 None 22 3 1 TRUE 0 0 NA B coding 515 1545 66 1610 PB.8204.1 chr15 + 1746 13 full-splice_match CLK3 ENST00000395066.7 2621 13 864 11 no_subtype FALSE canonical NA NA 1337 None 41 2 0 FALSE 0 0 NA C coding 490 1470 42 1511 PB.1399.3 chr2 + 2870 1 novel_in_catalog MXD1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 39 21 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8204.3 chr15 + 1647 12 novel_in_catalog CLK3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1239 None 2 1 0 FALSE 0 0 NA C coding 269 807 607 1413 PB.8204.2 chr15 + 3699 12 full-splice_match CLK3 ENST00000454830.6 3787 12 82 6 no_subtype FALSE canonical NA NA 3211 None 7 6 0 FALSE 0 0 NA C coding 369 1107 2279 3385 PB.3783.1 chr6 + 1032 7 full-splice_match GMNN ENST00000356509.7 1133 7 52 49 no_subtype FALSE canonical NA NA 623 None 2 1 0 FALSE 0 0 NA A coding 209 627 156 782 PB.3545.3 chr5 - 5506 29 novel_not_in_catalog DIAPH1 novel NA NA NA NA no_subtype FALSE canonical NA NA 251 None 74 14 2 TRUE 0 0 NA B coding 732 2196 135 2330 PB.1019.1 chr1 + 3103 12 novel_not_in_catalog CD46 novel NA NA NA NA no_subtype FALSE canonical NA NA 1120 None 66 18 1 TRUE 0 0 NA B coding 174 522 86 607 PB.1092.1 chr1 + 2870 16 novel_not_in_catalog ADCK3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1789 None 27 8 0 TRUE 0 0 NA B coding 647 1941 131 2071 PB.10252.1 chr20 + 2431 2 full-splice_match PRNP ENST00000379440.8 2657 2 225 1 no_subtype FALSE canonical NA NA 52 None 7 6 0 FALSE 0 0 NA A coding 253 759 63 821 PB.10611.1 chr21 - 3312 3 intergenic novelGene_459 novel NA NA NA NA no_subtype TRUE canonical NA NA 337 None 8 29 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7610.1 chr14 + 3217 7 full-splice_match ABHD4 ENST00000428304.6 3366 7 58 91 no_subtype FALSE canonical NA NA 951 None 4 12 0 FALSE 0 0 NA A coding 342 1026 13 1038 PB.11214.4 chrX - 2645 14 novel_not_in_catalog G6PD novel NA NA NA NA no_subtype FALSE canonical NA NA 499 None 2 32 2 TRUE 0 0 NA B coding 515 1545 508 2052 PB.6532.2 chr11 + 2812 7 novel_in_catalog SLCO2B1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 979 None 2 7 0 FALSE 0 0 NA C coding 324 972 186 1157 PB.6532.1 chr11 + 3784 13 incomplete-splice_match SLCO2B1 ENST00000289575.9 4494 14 411 299 internal_fragment FALSE canonical NA NA 1933 None 11 7 0 FALSE 0 0 NA C coding 687 2061 51 2111 PB.6994.2 chr12 + 1666 5 novel_not_in_catalog PFDN5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1489 None 2 13 2 TRUE 0 0 NA C coding 99 297 1267 1563 PB.6994.1 chr12 + 592 6 full-splice_match PFDN5 ENST00000334478.8 586 6 -10 4 no_subtype FALSE canonical NA NA 414 None 3 3 0 FALSE 0 0 NA C coding 154 462 27 488 PB.10904.4 chrX + 1727 4 novel_not_in_catalog PDK3 novel NA NA NA NA no_subtype FALSE canonical NA NA 375 None 2 9 0 TRUE 0 0 NA C coding 107 321 128 448 PB.10021.1 chr19 + 3084 2 full-splice_match ZNF574 ENST00000359044.4 2940 2 1 -145 no_subtype FALSE canonical NA NA 120 None 40 2 0 FALSE 0 0 NA A coding 896 2688 141 2828 PB.10276.1 chr20 + 4473 4 full-splice_match BTBD3 ENST00000449299.5 849 4 -45 -3579 no_subtype FALSE canonical NA NA 517 None 2 13 0 FALSE 0 0 NA C coding 371 1113 435 1547 PB.10276.2 chr20 + 4517 5 full-splice_match BTBD3 ENST00000254977.7 4686 5 149 20 no_subtype FALSE canonical NA NA 561 None 2 14 1 FALSE 0 0 NA C coding 461 1383 209 1591 PB.10276.3 chr20 + 2949 1 incomplete-splice_match BTBD3 ENST00000618918.4 4486 5 1530 8 no_subtype FALSE canonical NA NA NA None 6 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.946.19 chr1 + 2812 30 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2771 None 2 21 2 TRUE 0 0 NA B coding 908 2724 87 2810 PB.9210.1 chr17 - 2020 2 genic_intron novelGene_482 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1458 None 2 9 1 FALSE 0 0 NA A coding 127 381 733 1113 PB.742.6 chr1 + 2716 13 novel_not_in_catalog SEMA4A novel NA NA NA NA no_subtype FALSE canonical NA NA 1393 None 6 5 0 TRUE 0 0 NA C coding 592 1776 208 1983 PB.2338.1 chr3 + 3067 16 full-splice_match ADGRG7 ENST00000273352.7 3140 16 12 61 no_subtype TRUE canonical NA NA 2392 None 11 3 0 FALSE 0 0 NA A coding 797 2391 257 2647 PB.946.18 chr1 + 2814 29 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2775 None 4 9 3 TRUE 0 0 NA B coding 875 2625 190 2814 PB.10160.2 chr19 - 3853 14 novel_not_in_catalog NLRP12 novel NA NA NA NA no_subtype FALSE canonical NA NA 471 None 4 7 2 TRUE 0 0 NA B coding 1061 3183 183 3365 PB.10160.3 chr19 - 3769 12 novel_not_in_catalog NLRP12 novel NA NA NA NA no_subtype FALSE canonical NA NA 427 None 7 4 1 TRUE 0 0 NA B coding 1061 3183 139 3321 PB.2644.2 chr3 - 2981 18 novel_not_in_catalog IGF2BP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 259 None 10 7 0 TRUE 0 0 NA B coding 599 1797 82 1878 PB.10160.1 chr19 - 3638 13 novel_not_in_catalog NLRP12 novel NA NA NA NA no_subtype TRUE canonical NA NA 427 None 6 6 2 TRUE 0 0 NA B coding 1004 3012 139 3150 PB.5737.1 chr10 - 3614 1 full-splice_match RP11-479G22.8 ENST00000609742.2 2057 1 -1567 10 no_subtype FALSE canonical NA NA NA None 11 23 0 FALSE 0 0 NA A coding 100 300 2537 2836 PB.10160.4 chr19 - 2932 10 novel_not_in_catalog NLRP12 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 80 None 11 1 0 TRUE 0 0 NA B coding 908 2724 209 2932 PB.7952.1 chr14 + 1885 11 full-splice_match PLD4 ENST00000392593.8 6515 11 78 4552 no_subtype TRUE canonical NA NA 1411 None 16 2 0 FALSE 0 0 NA A coding 506 1518 91 1608 PB.2709.1 chr4 - 2534 15 novel_not_in_catalog LETM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 270 None 2 6 1 TRUE 0 0 NA A coding 739 2217 189 2405 PB.4894.6 chr8 - 3736 3 novel_not_in_catalog KAT6A novel NA NA NA NA no_subtype FALSE canonical NA NA 87 None 5 20 1 TRUE 0 0 NA C coding 214 642 413 1054 PB.3886.1 chr6 + 2121 3 full-splice_match CDKN1A ENST00000244741.9 2180 3 57 2 no_subtype FALSE canonical NA NA 534 None 35 9 0 FALSE 0 0 NA A coding 164 492 90 581 PB.9766.9 chr19 + 3021 18 novel_not_in_catalog ILF3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2373 None 2 2 1 FALSE 0 0 NA C coding 460 1380 4 1383 PB.9766.8 chr19 + 5966 21 novel_not_in_catalog ILF3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5282 None 4 25 0 TRUE 0 0 NA C coding 884 2652 268 2919 PB.542.1 chr1 + 5781 3 novel_not_in_catalog CYB561D1 novel NA NA NA NA no_subtype FALSE canonical NA NA 5569 None 2 32 1 TRUE 0 0 NA A coding 171 513 1101 1613 PB.6179.1 chr11 - 1550 1 incomplete-splice_match TPP1 ENST00000299427.10 3536 13 1975 12 no_subtype FALSE canonical NA NA NA None 5 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6179.2 chr11 - 2494 13 full-splice_match TPP1 ENST00000299427.10 3536 13 49 993 no_subtype FALSE canonical NA NA 29 None 310 3 0 FALSE 0 0 NA C coding 563 1689 13 1701 PB.9766.3 chr19 + 3427 20 novel_in_catalog ILF3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2759 None 24 2 0 FALSE 0 0 NA C coding 880 2640 251 2890 PB.9766.2 chr19 + 3436 20 full-splice_match ILF3 ENST00000449870.5 6119 20 109 2574 no_subtype FALSE canonical NA NA 2771 None 14 2 0 FALSE 0 0 NA C coding 884 2652 251 2902 PB.742.5 chr1 + 3200 16 novel_not_in_catalog SEMA4A novel NA NA NA NA no_subtype FALSE canonical NA NA 1871 None 4 20 1 TRUE 0 0 NA C coding 810 2430 32 2461 PB.9766.7 chr19 + 1397 11 incomplete-splice_match ILF3 ENST00000589998.5 2622 18 -35 1260 3prime_fragment FALSE canonical NA NA 1321 None 4 2 0 FALSE 0 0 NA C coding 367 1101 295 1395 PB.9766.6 chr19 + 3612 18 full-splice_match ILF3 ENST00000589998.5 2622 18 9 -999 no_subtype FALSE canonical NA NA 2267 None 12 7 0 FALSE 0 0 NA C coding 702 2106 209 2314 PB.9766.5 chr19 + 3650 18 full-splice_match ILF3 ENST00000407004.7 3671 18 16 5 no_subtype FALSE canonical NA NA 2305 None 7 10 1 FALSE 0 0 NA C coding 706 2118 235 2352 PB.9766.4 chr19 + 5943 21 novel_not_in_catalog ILF3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5279 None 13 29 1 TRUE 0 0 NA C coding 880 2640 277 2916 PB.2411.2 chr3 + 3963 27 full-splice_match STXBP5L ENST00000471454.5 3813 27 40 -190 no_subtype FALSE canonical NA NA 3545 None 3 1 0 FALSE 0 0 NA C coding 1162 3486 99 3584 PB.6325.1 chr11 + 6043 18 novel_not_in_catalog PTPRJ novel NA NA NA NA no_subtype FALSE canonical NA NA 2409 None 3 18 1 FALSE 0 0 NA B coding 782 2346 220 2565 PB.4839.1 chr8 + 2972 24 novel_not_in_catalog ADAM28 novel NA NA NA NA no_subtype FALSE canonical NA NA 2398 None 4 10 1 FALSE 0 0 NA A coding 796 2388 29 2416 PB.6325.2 chr11 + 6269 19 incomplete-splice_match PTPRJ ENST00000418331.6 5122 25 1572 -2719 internal_fragment FALSE canonical NA NA 2635 None 3 20 0 FALSE 0 0 NA B coding 854 2562 230 2791 PB.4200.2 chr6 - 2784 1 genic_intron novelGene_1248 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9065.1 chr17 - 4336 5 novel_in_catalog SLFN13 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 19 None 4 9 0 FALSE 0 0 NA A coding 897 2691 33 2723 PB.5566.2 chr9 - 1397 5 full-splice_match TOR1A ENST00000351698.4 2076 5 3 676 no_subtype FALSE canonical NA NA 224 None 30 5 0 FALSE 0 0 NA A coding 332 996 47 1042 PB.10228.5 chr20 - 2989 12 novel_not_in_catalog SIRPB1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 133 None 2 20 7 TRUE 0 0 NA B non_coding NA NA NA NA PB.2479.1 chr3 + 1666 8 novel_not_in_catalog SRPRB novel NA NA NA NA no_subtype TRUE canonical NA NA 1236 None 48 12 1 TRUE 0 0 NA A coding 271 813 14 826 PB.10228.7 chr20 - 2693 11 novel_not_in_catalog SIRPB1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 133 None 30 11 6 TRUE 0 0 NA B coding 143 429 830 1258 PB.10228.6 chr20 - 2666 9 novel_not_in_catalog SIRPB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 108 None 4 12 4 TRUE 0 0 NA B coding 143 429 804 1232 PB.6264.1 chr11 - 6493 2 genic LMO2 novel NA NA NA NA no_subtype FALSE canonical NA NA 5467 None 2 67 1 TRUE 0 0 NA A coding 114 342 3278 3619 PB.5400.1 chr9 + 3011 26 novel_in_catalog COL15A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1912 None 4 8 1 FALSE 0 0 NA A coding 672 2016 108 2123 PB.10228.3 chr20 - 3155 11 novel_not_in_catalog SIRPB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 133 None 21 17 6 TRUE 0 0 NA B coding 143 429 830 1258 PB.10228.2 chr20 - 3133 12 novel_not_in_catalog SIRPB1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 105 None 2 16 6 TRUE 0 0 NA B coding 304 912 319 1230 PB.6092.1 chr10 - 1558 6 full-splice_match BNIP3 ENST00000368636.8 2861 6 62 1241 no_subtype FALSE canonical NA NA 191 None 5 11 0 FALSE 0 0 NA A coding 194 582 146 727 PB.9679.2 chr19 - 3149 15 full-splice_match EEF2 ENST00000309311.6 3164 15 6 9 no_subtype FALSE canonical NA NA 86 None 1380 2 0 FALSE 0 0 NA C coding 858 2574 84 2657 PB.10228.8 chr20 - 2791 7 novel_not_in_catalog SIRPB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 115 None 2 13 3 TRUE 0 0 NA B coding 284 852 43 894 PB.10248.3 chr20 + 2856 6 novel_in_catalog MAVS novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1096 None 2 6 0 FALSE 0 0 NA C coding 399 1197 362 1558 PB.10248.2 chr20 + 4447 7 full-splice_match MAVS ENST00000428216.3 11714 7 35 7232 no_subtype FALSE canonical NA NA 1251 None 34 13 0 FALSE 0 0 NA C coding 540 1620 94 1713 PB.10248.1 chr20 + 3529 4 genic MAVS novel NA NA NA NA no_subtype FALSE canonical NA NA 111 None 3 28 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.16.15 chr1 - 1850 13 novel_not_in_catalog NADK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 86 None 12 9 0 TRUE 0 0 NA B coding 440 1320 148 1467 PB.10248.7 chr20 + 3507 1 incomplete-splice_match MAVS ENST00000416600.6 11596 6 6363 1727 no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA C coding 48 144 178 321 PB.7037.1 chr12 - 2955 11 full-splice_match CS ENST00000351328.7 2975 11 18 2 no_subtype FALSE canonical NA NA 215 None 4 10 0 FALSE 0 0 NA C coding 466 1398 174 1571 PB.10248.5 chr20 + 4164 6 incomplete-splice_match MAVS ENST00000428216.3 11714 7 62 7488 internal_fragment FALSE canonical NA NA 1224 None 4 16 0 FALSE 0 0 NA C coding 540 1620 67 1686 PB.10248.4 chr20 + 4067 6 novel_in_catalog MAVS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 728 None 2 11 0 FALSE 0 0 NA C coding 456 1368 104 1471 PB.1997.1 chr3 + 3400 13 full-splice_match IRAK2 ENST00000256458.4 3483 13 81 2 no_subtype FALSE canonical NA NA 1774 None 2 15 0 FALSE 0 0 NA A coding 625 1875 10 1884 PB.16.12 chr1 - 3156 16 novel_not_in_catalog NADK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 31 None 2 27 3 TRUE 0 0 NA B coding 440 1320 192 1511 PB.3692.1 chr5 - 2199 14 full-splice_match HNRNPH1 ENST00000442819.6 2248 14 47 2 no_subtype FALSE canonical NA NA 39 None 2 6 0 FALSE 0 0 NA C coding 449 1347 71 1417 PB.9278.1 chr17 + 2807 6 full-splice_match PPM1D ENST00000305921.7 4778 6 167 1804 no_subtype FALSE canonical NA NA 1325 None 37 7 0 FALSE 0 0 NA A coding 605 1815 66 1880 PB.2948.1 chr4 - 1329 2 full-splice_match PYURF ENST00000273968.4 1361 2 5 27 no_subtype FALSE canonical NA NA 311 None 38 3 0 FALSE 0 0 NA A coding 114 342 109 450 PB.165.1 chr1 - 509 2 genic UBXN11 novel NA NA NA NA no_subtype FALSE canonical NA NA 344 None 5 3 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.4615.1 chr7 - 4030 6 full-splice_match TMEM168 ENST00000454074.5 2659 6 -30 -1341 no_subtype FALSE canonical NA NA 264 None 21 9 0 FALSE 0 0 NA A coding 681 2043 532 2574 PB.2948.2 chr4 - 2768 1 full-splice_match PIGY ENST00000527353.1 217 1 -1968 -583 no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.742.3 chr1 + 3069 15 novel_not_in_catalog SEMA4A novel NA NA NA NA no_subtype FALSE canonical NA NA 1724 None 182 4 0 TRUE 0 0 NA C coding 761 2283 32 2314 PB.2486.1 chr3 - 3559 2 genic_intron novelGene_1165 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2318 None 2 35 1 FALSE 0 0 NA A coding 118 354 2290 2643 PB.6618.3 chr11 - 2777 3 full-splice_match MSANTD4 ENST00000530788.1 948 3 174 -2003 no_subtype FALSE canonical NA NA 35 None 6 8 1 FALSE 0 0 NA A coding 345 1035 186 1220 PB.7959.6 chr14 - 1490 8 fusion IGHA2,IGHV4-4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 92 None 3 15 2 TRUE 0 0 NA B coding 146 438 26 463 PB.986.2 chr1 + 2543 11 novel_not_in_catalog LAX1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2336 None 3 5 4 TRUE 0 0 NA B coding 398 1194 384 1577 PB.8230.1 chr15 + 2655 4 antisense novelGene_TSPAN3_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2547 None 2 23 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.526.2 chr1 + 2548 2 novel_not_in_catalog PRMT6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2125 None 2 13 1 FALSE 0 0 NA C coding 375 1125 13 1137 PB.526.1 chr1 + 2586 1 full-splice_match PRMT6 ENST00000370078.1 2616 1 11 19 no_subtype FALSE canonical NA NA NA None 3 13 0 FALSE 0 0 NA C coding 375 1125 27 1151 PB.6191.1 chr11 - 1586 1 genic_intron novelGene_63 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4940.2 chr8 - 3415 31 novel_not_in_catalog NSMAF novel NA NA NA NA no_subtype FALSE non_canonical NA NA 118 None 2 3 0 FALSE 0 0 NA B coding 920 2760 60 2819 PB.2775.2 chr4 - 1499 1 antisense novelGene_PI4K2B_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5408.1 chr9 + 3520 18 novel_not_in_catalog INVS novel NA NA NA NA no_subtype TRUE canonical NA NA 3273 None 4 2 0 TRUE 0 0 NA A coding 1065 3195 183 3377 PB.9645.1 chr19 - 1921 4 novel_not_in_catalog C19orf25 novel NA NA NA NA no_subtype FALSE canonical NA NA 140 None 5 18 2 TRUE 0 0 NA A coding 118 354 11 364 PB.2775.1 chr4 + 3497 10 full-splice_match PI4K2B ENST00000264864.7 3540 10 51 -8 no_subtype FALSE canonical NA NA 1410 None 9 10 0 FALSE 0 0 NA A coding 481 1443 139 1581 PB.11210.3 chrX + 1511 6 novel_not_in_catalog GDI1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1237 None 2 7 0 TRUE 0 0 NA C coding 196 588 96 683 PB.7010.1 chr12 + 1879 9 full-splice_match COPZ1 ENST00000262061.6 1897 9 17 1 no_subtype FALSE canonical NA NA 506 None 23 2 0 FALSE 0 0 NA C coding 177 531 21 551 PB.179.1 chr1 - 1749 4 full-splice_match KDF1 ENST00000320567.5 1793 4 33 11 no_subtype FALSE canonical NA NA 24 None 2 4 0 FALSE 0 0 NA A coding 398 1194 57 1250 PB.742.2 chr1 + 3018 16 novel_not_in_catalog SEMA4A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1676 None 2 6 2 TRUE 0 0 NA C coding 723 2169 98 2266 PB.784.6 chr1 - 2951 15 novel_not_in_catalog DCAF8 novel NA NA NA NA no_subtype FALSE canonical NA NA 212 None 24 7 1 TRUE 0 0 NA B coding 597 1791 313 2103 PB.10939.1 chrX + 3428 26 full-splice_match UBA1 ENST00000377351.8 3466 26 35 3 no_subtype FALSE canonical NA NA 3096 None 29 2 0 FALSE 0 0 NA C coding 1058 3174 56 3229 PB.10939.2 chrX + 3524 26 novel_not_in_catalog UBA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3192 None 2 10 0 FALSE 0 0 NA C coding 1058 3174 152 3325 PB.10939.3 chrX + 3671 27 novel_not_in_catalog UBA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3342 None 2 4 1 FALSE 0 0 NA C coding 1058 3174 302 3475 PB.10939.4 chrX + 3523 26 full-splice_match UBA1 ENST00000335972.10 3559 26 32 4 no_subtype FALSE canonical NA NA 3192 None 92 2 0 FALSE 0 0 NA C coding 1058 3174 152 3325 PB.10939.5 chrX + 3597 26 novel_not_in_catalog UBA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3265 None 2 4 0 FALSE 0 0 NA C coding 1058 3174 225 3398 PB.7010.2 chr12 + 1841 8 incomplete-splice_match COPZ1 ENST00000549043.5 1232 9 136 -745 internal_fragment FALSE canonical NA NA 469 None 3 2 0 FALSE 0 0 NA C coding 89 267 248 514 PB.8284.1 chr15 - 1865 6 full-splice_match AP3S2 ENST00000336418.8 5891 6 314 3712 no_subtype FALSE canonical NA NA 148 None 34 7 0 FALSE 0 0 NA A coding 193 579 80 658 PB.8284.3 chr15 - 1538 1 genic_intron novelGene_818 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5768.1 chr10 - 3337 10 novel_not_in_catalog NCOA4 novel NA NA NA NA no_subtype TRUE canonical NA NA 107 None 2 14 0 TRUE 0 0 NA C coding 448 1344 470 1813 PB.5768.3 chr10 - 3453 10 novel_not_in_catalog NCOA4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 92 None 257 18 1 TRUE 0 0 NA C coding 614 1842 108 1949 PB.737.1 chr1 - 1081 6 full-splice_match SSR2 ENST00000295702.8 1116 6 28 7 no_subtype FALSE canonical NA NA 44 None 9 2 0 FALSE 0 0 NA A coding 183 549 45 593 PB.4767.1 chr7 + 2844 6 full-splice_match INSIG1 ENST00000340368.8 3010 6 163 3 no_subtype FALSE canonical NA NA 852 None 108 11 1 FALSE 0 0 NA C coding 277 831 49 879 PB.4906.1 chr8 + 1645 10 novel_not_in_catalog FNTA novel NA NA NA NA no_subtype FALSE canonical NA NA 1024 None 48 3 0 TRUE 0 0 NA A coding 379 1137 8 1144 PB.5768.7 chr10 - 3486 13 novel_not_in_catalog NCOA4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 22 None 131 17 2 TRUE 0 0 NA C coding 614 1842 141 1982 PB.5768.6 chr10 - 3486 11 novel_not_in_catalog NCOA4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 81 None 2 16 0 TRUE 0 0 NA C coding 614 1842 141 1982 PB.4117.2 chr6 - 1375 6 full-splice_match ECHDC1 ENST00000474289.6 2443 6 17 1051 no_subtype FALSE canonical NA NA 369 None 10 1 0 FALSE 0 0 NA C coding 301 903 372 1274 PB.4117.3 chr6 - 2756 1 novel_in_catalog ECHDC1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.742.1 chr1 + 3051 15 novel_not_in_catalog SEMA4A novel NA NA NA NA no_subtype FALSE canonical NA NA 1722 None 95 2 0 TRUE 0 0 NA C coding 761 2283 30 2312 PB.1874.1 chr2 - 1417 4 full-splice_match TUBA4A ENST00000248437.8 2162 4 116 629 no_subtype FALSE canonical NA NA 61 None 84 0 0 FALSE 0 0 NA C coding 448 1344 59 1402 PB.1306.2 chr2 - 4324 38 full-splice_match LRPPRC ENST00000260665.11 6335 38 16 1995 no_subtype FALSE canonical NA NA 191 None 54 4 1 FALSE 0 0 NA A coding 1394 4182 43 4224 PB.844.5 chr1 + 3875 6 full-splice_match MPZL1 ENST00000359523.6 5010 6 34 1101 no_subtype FALSE canonical NA NA 876 None 42 20 0 FALSE 0 0 NA C coding 269 807 169 975 PB.10737.1 chr22 + 1319 3 full-splice_match MPST ENST00000429360.5 1331 3 0 12 no_subtype FALSE canonical NA NA 724 None 2 2 0 FALSE 0 0 NA A coding 317 951 70 1020 PB.171.8 chr1 + 2994 21 novel_not_in_catalog RPS6KA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2050 None 2 3 1 TRUE 0 0 NA C coding 507 1521 650 2170 PB.8595.1 chr16 + 2789 16 novel_not_in_catalog LONP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 2370 None 23 1 0 TRUE 0 0 NA B coding 852 2556 34 2589 PB.171.3 chr1 + 2854 20 novel_in_catalog RPS6KA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1911 None 3 1 0 FALSE 0 0 NA C coding 677 2031 1 2031 PB.4093.3 chr6 - 1747 1 novel_in_catalog LAMA4 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C coding 120 360 27 386 PB.171.1 chr1 + 3150 22 full-splice_match RPS6KA1 ENST00000374168.6 3186 22 29 7 no_subtype FALSE canonical NA NA 2210 None 2 7 0 FALSE 0 0 NA C coding 735 2205 126 2330 PB.3013.1 chr4 - 1663 1 full-splice_match NT5C3AP1 ENST00000441170.1 1663 1 15 -15 no_subtype FALSE canonical NA NA NA None 6 6 0 FALSE 0 0 NA A coding 189 567 51 617 PB.8285.1 chr15 + 2825 2 genic MIR3174 novel NA NA NA NA no_subtype FALSE canonical NA NA 2531 None 2 11 0 FALSE 0 0 NA A coding 61 183 126 308 PB.171.6 chr1 + 2972 20 novel_in_catalog RPS6KA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2029 None 14 2 0 FALSE 0 0 NA C coding 702 2106 44 2149 PB.171.5 chr1 + 2948 21 full-splice_match RPS6KA1 ENST00000531382.5 2359 21 155 -744 no_subtype FALSE canonical NA NA 2006 None 151 2 0 FALSE 0 0 NA C coding 643 1929 198 2126 PB.171.4 chr1 + 2972 21 full-splice_match RPS6KA1 ENST00000530003.5 3023 21 64 -13 no_subtype FALSE canonical NA NA 2023 None 74 1 0 FALSE 0 0 NA C coding 643 1929 215 2143 PB.7445.1 chr13 - 3231 1 incomplete-splice_match FOXO1 ENST00000379561.5 5735 3 2398 107 no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2860.1 chr4 - 1876 6 full-splice_match UGT2B17 ENST00000317746.2 2077 6 -3 204 no_subtype FALSE canonical NA NA 770 None 11 1 0 FALSE 0 0 NA A coding 530 1590 47 1636 PB.1088.1 chr1 - 3331 23 full-splice_match PARP1 ENST00000366794.9 3958 23 20 607 no_subtype FALSE canonical NA NA 244 None 105 3 0 FALSE 0 0 NA A coding 1014 3042 125 3166 PB.6519.1 chr11 + 1984 7 full-splice_match PLEKHB1 ENST00000227214.10 2016 7 22 10 no_subtype FALSE canonical NA NA 640 None 4 8 0 FALSE 0 0 NA C coding 189 567 208 774 PB.4519.2 chr7 - 2098 2 genic_intron novelGene_866 novel NA NA NA NA no_subtype FALSE canonical NA NA 1297 None 2 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5301.1 chr9 + 1835 12 full-splice_match POLR1E ENST00000377798.8 1868 12 12 21 no_subtype FALSE canonical NA NA 1201 None 4 4 0 FALSE 0 0 NA A coding 419 1257 102 1358 PB.5727.1 chr10 - 2555 10 novel_not_in_catalog MTPAP novel NA NA NA NA no_subtype FALSE canonical NA NA 29 None 2 6 1 TRUE 0 0 NA A coding 582 1746 32 1777 PB.3170.1 chr5 + 2762 1 genic_intron novelGene_44 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 10 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7362.8 chr12 - 795 5 novel_not_in_catalog UBC novel NA NA NA NA no_subtype TRUE canonical NA NA 39 None 2 0 0 TRUE 0 0 NA B coding 229 687 43 729 PB.5163.1 chr8 - 4036 27 full-splice_match OPLAH ENST00000618853.4 4031 27 -8 3 no_subtype FALSE canonical NA NA 59 None 21 2 1 FALSE 0 0 NA A coding 1288 3864 113 3976 PB.10470.1 chr20 + 2853 7 novel_not_in_catalog EDN3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1193 None 4 14 1 TRUE 0 0 NA B coding 257 771 389 1159 PB.10470.2 chr20 + 1678 7 novel_not_in_catalog EDN3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 971 None 2 4 1 TRUE 0 0 NA B coding 187 561 377 937 PB.7362.6 chr12 - 1049 4 novel_not_in_catalog UBC novel NA NA NA NA no_subtype TRUE canonical NA NA 64 None 2 0 0 TRUE 0 0 NA B coding 305 915 68 982 PB.7362.1 chr12 - 1937 3 novel_not_in_catalog UBC novel NA NA NA NA no_subtype TRUE non_canonical NA NA 39 None 2 6 0 TRUE 0 0 NA B coding 609 1827 43 1869 PB.7362.3 chr12 - 1961 3 novel_not_in_catalog UBC novel NA NA NA NA no_subtype TRUE canonical NA NA 64 None 43 6 0 TRUE 0 0 NA B coding 609 1827 68 1894 PB.7362.2 chr12 - 1732 3 novel_not_in_catalog UBC novel NA NA NA NA no_subtype FALSE canonical NA NA 64 None 14 3 0 TRUE 0 0 NA B coding 533 1599 68 1666 PB.6338.2 chr11 + 3227 1 incomplete-splice_match ZFP91 ENST00000316059.6 5220 11 1909 85 no_subtype FALSE canonical NA NA NA None 17 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4228.10 chr6 + 2541 1 genic_intron novelGene_1268 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9667.1 chr19 + 1576 1 full-splice_match S1PR4 ENST00000246115.4 1565 1 -13 2 no_subtype FALSE canonical NA NA NA None 18 2 0 FALSE 0 0 NA C coding 384 1152 39 1190 PB.3435.6 chr5 + 1572 1 genic_intron novelGene_1046 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3435.7 chr5 + 2971 2 genic_intron novelGene_1047 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2814 None 2 14 0 FALSE 0 0 NA A coding 59 177 148 324 PB.3435.5 chr5 + 1729 2 full-splice_match TNFAIP8 ENST00000504771.2 8681 2 1707 5245 no_subtype FALSE canonical NA NA 101 None 20 7 0 FALSE 0 0 NA C coding 198 594 71 664 PB.44.1 chr1 + 1482 1 incomplete-splice_match H6PD ENST00000377403.6 9146 5 7659 6 no_subtype FALSE canonical NA NA NA None 5 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8182.1 chr15 - 2669 4 genic ANP32A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 785 None 4 19 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.3435.1 chr5 + 1519 2 full-splice_match TNFAIP8 ENST00000274456.6 795 2 100 -824 no_subtype FALSE canonical NA NA 116 None 10 4 0 FALSE 0 0 NA C coding 188 564 116 679 PB.7151.1 chr12 - 1464 8 full-splice_match DCN ENST00000393155.5 2133 8 56 613 no_subtype FALSE canonical NA NA 165 None 76 1 0 FALSE 0 0 NA C coding 359 1077 199 1275 PB.2465.2 chr3 + 1641 7 full-splice_match HMCES ENST00000383463.8 2515 7 -16 890 no_subtype FALSE canonical NA NA 933 None 5 6 0 FALSE 0 0 NA C coding 354 1062 106 1167 PB.7151.3 chr12 - 1686 8 novel_in_catalog DCN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 49 None 2 6 0 FALSE 0 0 NA C coding 359 1077 83 1159 PB.7151.2 chr12 - 1615 8 full-splice_match DCN ENST00000052754.9 7156 8 317 5224 no_subtype FALSE canonical NA NA 152 None 41 2 0 FALSE 0 0 NA C coding 359 1077 186 1262 PB.7346.3 chr12 + 5856 30 novel_not_in_catalog HIP1R novel NA NA NA NA no_subtype TRUE canonical NA NA 4610 None 2 27 1 TRUE 0 0 NA C coding 489 1467 3189 4655 PB.7346.2 chr12 + 4542 31 novel_in_catalog HIP1R novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3295 None 4 13 0 FALSE 0 0 NA C coding 418 1254 61 1314 PB.7346.1 chr12 + 4481 32 full-splice_match HIP1R ENST00000253083.8 4539 32 51 7 no_subtype FALSE canonical NA NA 3233 None 30 11 0 FALSE 0 0 NA C coding 1068 3204 75 3278 PB.492.2 chr1 - 1491 1 novel_in_catalog TMED5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.492.1 chr1 - 3667 4 full-splice_match TMED5 ENST00000370282.7 6104 4 315 2122 no_subtype FALSE canonical NA NA 360 None 65 22 0 FALSE 0 0 NA C coding 229 687 172 858 PB.3800.2 chr6 - 2988 6 full-splice_match ZNF184 ENST00000211936.10 3101 6 23 90 no_subtype FALSE canonical NA NA 123 None 11 1 0 FALSE 0 0 NA C coding 751 2253 263 2515 PB.3800.3 chr6 - 3286 6 novel_not_in_catalog ZNF184 novel NA NA NA NA no_subtype TRUE canonical NA NA 338 None 2 6 0 FALSE 0 0 NA C coding 751 2253 478 2730 PB.3800.1 chr6 - 3286 7 novel_not_in_catalog ZNF184 novel NA NA NA NA no_subtype FALSE canonical NA NA 146 None 2 6 0 FALSE 0 0 NA C coding 663 1989 741 2729 PB.7670.1 chr14 - 3916 21 novel_not_in_catalog SEC23A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 112 None 3 7 1 TRUE 0 0 NA B coding 582 1746 134 1879 PB.2816.1 chr4 - 3823 8 novel_not_in_catalog RBM47 novel NA NA NA NA no_subtype FALSE canonical NA NA 94 None 2 10 0 FALSE 0 0 NA C coding 592 1776 493 2268 PB.10533.4 chr21 + 1652 7 full-splice_match IL10RB ENST00000290200.6 1963 7 25 286 no_subtype FALSE canonical NA NA 887 None 37 6 0 FALSE 0 0 NA C coding 325 975 84 1058 PB.7670.2 chr14 - 3699 21 novel_not_in_catalog SEC23A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 117 None 73 3 0 TRUE 0 0 NA B coding 765 2295 139 2433 PB.10533.2 chr21 + 2835 14 novel_not_in_catalog IFNAR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2655 None 2 10 1 TRUE 0 0 NA C coding 545 1635 357 1991 PB.2824.1 chr4 - 2730 1 incomplete-splice_match ATP8A1 ENST00000514372.5 5918 14 3181 8 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10533.1 chr21 + 1391 9 full-splice_match IFNAR2 ENST00000382264.7 1389 9 -3 1 no_subtype FALSE canonical NA NA 1196 None 6 3 0 FALSE 0 0 NA C coding 331 993 357 1349 PB.9151.1 chr17 - 2713 7 novel_not_in_catalog VAT1 novel NA NA NA NA no_subtype TRUE canonical NA NA 467 None 223 5 0 TRUE 0 0 NA A coding 393 1179 81 1259 PB.5965.2 chr10 + 1470 2 genic_intron novelGene_908 novel NA NA NA NA no_subtype FALSE canonical NA NA 127 None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10342.1 chr20 - 1894 13 full-splice_match GSS ENST00000216951.6 1922 13 19 9 no_subtype FALSE canonical NA NA 72 None 14 1 0 FALSE 0 0 NA A coding 474 1422 81 1502 PB.5965.1 chr10 - 4370 14 full-splice_match DNMBP ENST00000636706.1 5437 14 90 977 no_subtype FALSE canonical NA NA 1299 None 2 3 0 FALSE 0 0 NA C coding 1209 3627 144 3770 PB.7312.3 chr12 + 2585 18 novel_not_in_catalog RNF10 novel NA NA NA NA no_subtype FALSE canonical NA NA 2313 None 248 2 0 TRUE 0 0 NA C coding 717 2151 237 2387 PB.5248.1 chr9 - 3189 1 incomplete-splice_match MOB3B ENST00000262244.5 6454 4 3261 5 no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8241.1 chr15 - 5456 25 novel_not_in_catalog ADAMTS7 novel NA NA NA NA no_subtype TRUE canonical NA NA 284 None 2 7 0 TRUE 0 0 NA A coding 1686 5058 185 5242 PB.7959.16 chr14 - 1626 12 fusion AL928768.3,IGHV4-34,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 40 None 2 14 5 TRUE 0 0 NA A coding 302 906 583 1488 PB.3340.1 chr5 + 3127 1 genic_intron novelGene_730 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 34 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.222.1 chr1 + 1750 9 full-splice_match TMEM39B ENST00000336294.9 1813 9 61 2 no_subtype FALSE canonical NA NA 1321 None 3 1 0 FALSE 0 0 NA C coding 492 1476 86 1561 PB.222.2 chr1 + 1448 7 full-splice_match TMEM39B ENST00000441402.5 1538 7 83 7 no_subtype FALSE canonical NA NA 1019 None 5 3 0 FALSE 0 0 NA C coding 293 879 381 1259 PB.7438.2 chr13 + 3004 4 novel_in_catalog EXOSC8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1660 None 3 24 0 FALSE 0 0 NA C coding 113 339 2548 2886 PB.7438.1 chr13 + 932 11 full-splice_match EXOSC8 ENST00000389704.3 1198 11 247 19 no_subtype FALSE canonical NA NA 733 None 2 2 0 FALSE 0 0 NA C coding 276 828 19 846 PB.6638.1 chr11 + 1525 4 full-splice_match FDX1 ENST00000260270.2 3206 4 287 1394 no_subtype FALSE canonical NA NA 391 None 4 6 0 FALSE 0 0 NA A coding 48 144 360 503 PB.7959.149 chr14 - 1564 10 fusion IGHV5-51,IGHG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 103 None 2 6 3 TRUE 0 0 NA A coding 196 588 841 1428 PB.5602.1 chr9 - 1730 10 novel_not_in_catalog SURF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 69 None 7 13 1 TRUE 0 0 NA A coding 300 900 16 915 PB.7959.18 chr14 - 1539 7 fusion IGHV6-1,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 99 None 11 7 3 TRUE 0 0 NA B coding 349 1047 440 1486 PB.967.1 chr1 + 2753 1 incomplete-splice_match PPP1R12B ENST00000608999.5 15248 24 8356 4140 no_subtype FALSE canonical NA NA NA None 6 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6498.2 chr11 - 2112 3 full-splice_match MRGPRF ENST00000309099.6 2295 3 185 -2 no_subtype FALSE canonical NA NA 142 None 3 6 0 FALSE 0 0 NA C coding 343 1029 199 1227 PB.6498.1 chr11 - 2145 3 novel_not_in_catalog MRGPRF novel NA NA NA NA no_subtype FALSE canonical NA NA 175 None 3 7 1 FALSE 0 0 NA C coding 343 1029 232 1260 PB.32.2 chr1 - 3190 12 full-splice_match NOL9 ENST00000377705.5 6649 12 26 3433 no_subtype FALSE canonical NA NA 403 None 8 5 0 FALSE 0 0 NA A coding 702 2106 8 2113 PB.9677.2 chr19 - 1954 11 novel_not_in_catalog APBA3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 64 None 9 0 0 FALSE 0 0 NA B coding 575 1725 102 1826 PB.9677.3 chr19 - 2731 10 novel_not_in_catalog APBA3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 51 None 3 12 0 FALSE 0 0 NA B coding 347 1041 89 1129 PB.206.2 chr1 + 1905 10 full-splice_match GMEB1 ENST00000294409.2 1912 10 4 3 no_subtype FALSE canonical NA NA 1107 None 2 3 1 FALSE 0 0 NA C coding 573 1719 87 1805 PB.206.3 chr1 + 1866 10 full-splice_match GMEB1 ENST00000361872.8 1894 10 14 14 no_subtype FALSE canonical NA NA 1066 None 4 0 0 FALSE 0 0 NA C coding 563 1689 76 1764 PB.3320.1 chr5 + 1523 1 full-splice_match RPL7P22 ENST00000466005.2 733 1 -10 -780 no_subtype FALSE canonical NA NA NA None 4 3 0 FALSE 0 0 NA A coding 117 351 393 743 PB.754.1 chr1 + 1626 8 novel_not_in_catalog NTRK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 785 None 2 2 0 TRUE 0 0 NA A coding 305 915 69 983 PB.8498.1 chr16 - 3347 10 novel_not_in_catalog EARS2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 146 None 2 16 1 TRUE 0 0 NA C coding 523 1569 8 1576 PB.8498.2 chr16 - 2937 9 full-splice_match EARS2 ENST00000449606.5 3961 9 14 1010 no_subtype FALSE canonical NA NA 157 None 15 8 0 FALSE 0 0 NA C coding 523 1569 19 1587 PB.1389.1 chr2 - 1442 9 novel_not_in_catalog WDR92 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 295 None 4 4 0 TRUE 0 0 NA A coding 357 1071 113 1183 PB.5232.1 chr9 + 1614 1 full-splice_match RRAGA ENST00000380527.2 1589 1 29 -54 no_subtype FALSE canonical NA NA NA None 22 5 0 FALSE 0 0 NA C coding 313 939 237 1175 PB.266.78 chr1 - 1573 5 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 92 None 3 9 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.266.79 chr1 - 3808 4 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 103 None 2 26 2 TRUE 0 0 NA C coding 118 354 2215 2568 PB.1905.9 chr2 - 3695 24 incomplete-splice_match TRIP12 ENST00000389045.7 5355 39 1885 -225 5prime_fragment FALSE canonical NA NA 32 None 2 1 0 FALSE 0 0 NA B coding 1103 3309 46 3354 PB.7540.1 chr13 + 3858 1 genic_intron novelGene_856 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 32 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8138.3 chr15 - 6269 35 incomplete-splice_match HERC1 ENST00000443617.6 15137 78 1262 7606 internal_fragment FALSE canonical NA NA 47 None 2 7 2 FALSE 0 0 NA B coding 1868 5604 666 6269 PB.8138.2 chr15 - 7226 37 novel_in_catalog HERC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 730 None 2 0 0 FALSE 0 0 NA B coding 2384 7152 74 7225 PB.7145.1 chr12 + 2761 1 genic_intron novelGene_796 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 12 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8724.2 chr16 - 3049 21 novel_not_in_catalog VAC14 novel NA NA NA NA no_subtype TRUE canonical NA NA 329 None 13 4 0 TRUE 0 0 NA A coding 782 2346 226 2571 PB.10114.1 chr19 + 2315 18 full-splice_match MED25 ENST00000312865.10 2332 18 14 3 no_subtype FALSE canonical NA NA 2185 None 12 2 0 FALSE 0 0 NA C coding 747 2241 40 2280 PB.266.76 chr1 - 3779 5 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 62 None 3 24 2 TRUE 0 0 NA C coding 118 354 2174 2527 PB.266.77 chr1 - 3600 4 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 96 None 19 22 2 TRUE 0 0 NA C coding 118 354 2208 2561 PB.9204.2 chr17 + 4147 5 novel_not_in_catalog NFE2L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1496 None 4 16 0 FALSE 0 0 NA B coding 742 2226 615 2840 PB.9204.3 chr17 + 4720 6 novel_in_catalog NFE2L1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1537 None 4 14 0 FALSE 0 0 NA B coding 772 2316 566 2881 PB.9204.1 chr17 + 4732 6 novel_not_in_catalog NFE2L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1542 None 6 16 0 FALSE 0 0 NA B coding 772 2316 571 2886 PB.7478.1 chr13 - 2909 13 novel_not_in_catalog SUCLA2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 111 None 6 11 0 TRUE 0 0 NA C coding 463 1389 22 1410 PB.9204.4 chr17 + 5653 8 novel_not_in_catalog NFE2L1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5621 None 2 27 0 TRUE 0 0 NA B coding 772 2316 1414 3729 PB.9204.5 chr17 + 3603 4 incomplete-splice_match NFE2L1 ENST00000585291.5 4390 6 778 9 internal_fragment FALSE canonical NA NA 419 None 5 16 1 FALSE 0 0 NA B coding 455 1365 399 1763 PB.6814.4 chr12 - 1528 13 incomplete-splice_match A2M ENST00000318602.11 4844 36 3317 -1 5prime_fragment FALSE canonical NA NA 22 None 4 0 0 FALSE 0 0 NA C coding 267 801 613 1413 PB.1528.2 chr2 + 1397 12 novel_not_in_catalog MRPS9 novel NA NA NA NA no_subtype TRUE canonical NA NA 1124 None 6 1 0 TRUE 0 0 NA C coding 396 1188 26 1213 PB.6814.3 chr12 - 4597 36 full-splice_match A2M ENST00000318602.11 4844 36 241 6 no_subtype FALSE canonical NA NA 153 None 115 3 0 FALSE 0 0 NA C coding 1474 4422 68 4489 PB.4582.1 chr7 + 3166 1 full-splice_match EIF4BP6 ENST00000431936.1 1828 1 654 -1992 no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA C coding 87 261 79 339 PB.1201.2 chr2 + 3592 14 novel_not_in_catalog GEN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1984 None 2 17 1 FALSE 0 0 NA A coding 908 2724 577 3300 PB.6921.1 chr12 - 2772 1 incomplete-splice_match SLC38A2 ENST00000256689.9 4888 16 2113 4 no_subtype FALSE canonical NA NA NA None 220 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9385.1 chr17 - 1976 10 full-splice_match PRPSAP1 ENST00000446526.7 3660 10 235 1449 no_subtype FALSE canonical NA NA 381 None 11 1 0 FALSE 0 0 NA C coding 385 1155 212 1366 PB.2995.1 chr4 + 3561 5 full-splice_match CYP2U1 ENST00000332884.10 4944 5 192 1191 no_subtype FALSE canonical NA NA 1539 None 5 5 0 FALSE 0 0 NA C coding 544 1632 84 1715 PB.8442.1 chr16 - 1912 9 full-splice_match RSL1D1 ENST00000571133.5 5483 9 66 3505 no_subtype FALSE canonical NA NA 112 None 40 6 0 FALSE 0 0 NA A coding 490 1470 8 1477 PB.10995.20 chrX - 1886 11 novel_not_in_catalog ALAS2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 28 None 2 7 1 TRUE 0 0 NA C coding 574 1722 44 1765 PB.10995.23 chrX - 1689 9 novel_in_catalog ALAS2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 28 None 2 1 0 FALSE 0 0 NA C coding 509 1527 44 1570 PB.10995.22 chrX - 2019 12 novel_not_in_catalog ALAS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 28 None 7 3 2 FALSE 0 0 NA C coding 621 1863 36 1898 PB.10995.25 chrX - 1701 11 novel_not_in_catalog ALAS2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 20 None 2 3 2 TRUE 0 0 NA C coding 515 1545 56 1600 PB.10995.24 chrX - 1807 11 novel_not_in_catalog ALAS2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 28 None 4 4 2 TRUE 0 0 NA C coding 434 1302 387 1688 PB.3328.1 chr5 + 4109 20 full-splice_match HMGCR ENST00000287936.8 4585 20 95 381 no_subtype TRUE canonical NA NA 2673 None 72 19 0 FALSE 0 0 NA A coding 888 2664 62 2725 PB.258.1 chr1 + 1401 4 genic_intron novelGene_352 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1267 None 3 8 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1817.1 chr2 - 1474 1 antisense novelGene_NRP2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11022.2 chrX - 5438 25 novel_not_in_catalog ZMYM3 novel NA NA NA NA no_subtype FALSE canonical NA NA 17 None 2 2 0 FALSE 0 0 NA C coding 1370 4110 37 4146 PB.4736.1 chr7 + 1713 4 full-splice_match ATP6V0E2 ENST00000425642.2 1649 4 -52 -12 no_subtype FALSE canonical NA NA 340 None 63 10 0 FALSE 0 0 NA A coding 81 243 76 318 PB.11022.1 chrX - 5534 25 full-splice_match ZMYM3 ENST00000314425.9 5536 25 0 2 no_subtype FALSE canonical NA NA 112 None 9 2 0 FALSE 0 0 NA C coding 1370 4110 132 4241 PB.7914.1 chr14 + 2580 12 novel_not_in_catalog CCNK novel NA NA NA NA no_subtype TRUE canonical NA NA 1227 None 9 4 0 TRUE 0 0 NA A coding 580 1740 111 1850 PB.777.1 chr1 - 3671 2 novel_not_in_catalog TAGLN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1831 None 3 27 1 TRUE 0 0 NA B coding 185 555 1527 2081 PB.9518.1 chr18 + 3697 12 novel_not_in_catalog IMPACT novel NA NA NA NA no_subtype FALSE canonical NA NA 949 None 2 17 0 TRUE 0 0 NA A coding 320 960 56 1015 PB.238.1 chr1 - 1653 7 full-splice_match AK2 ENST00000373449.6 3586 7 -8 1941 no_subtype FALSE canonical NA NA 143 None 36 3 0 FALSE 0 0 NA C coding 232 696 51 746 PB.3356.1 chr5 - 504 4 full-splice_match RPS23 ENST00000296674.12 3437 4 223 2710 no_subtype FALSE canonical NA NA 35 None 4 0 0 FALSE 0 0 NA A coding 143 429 32 460 PB.238.2 chr1 - 4000 6 full-splice_match AK2 ENST00000354858.10 1021 6 138 -3117 no_subtype FALSE canonical NA NA 119 None 2 21 0 FALSE 0 0 NA C coding 239 717 27 743 PB.581.2 chr1 - 1628 2 novel_not_in_catalog PHTF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 94 None 2 12 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.581.3 chr1 - 2895 1 incomplete-splice_match RSBN1 ENST00000612242.4 6592 7 3692 6 no_subtype FALSE canonical NA NA NA None 10 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4718.10 chr7 + 3395 3 antisense novelGene_KIAA1147_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3187 None 4 12 0 FALSE 0 0 NA B coding 111 333 1692 2024 PB.581.1 chr1 - 1633 2 genic PHTF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 75 None 2 12 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.2984.1 chr4 - 1501 8 full-splice_match UBE2D3 ENST00000453744.6 3990 8 279 2210 no_subtype FALSE canonical NA NA 107 None 110 1 0 FALSE 0 0 NA C coding 147 441 236 676 PB.4695.1 chr7 - 728 4 full-splice_match MTPN ENST00000393085.3 3738 4 -4 3014 no_subtype FALSE canonical NA NA 292 None 5 1 0 FALSE 0 0 NA C coding 118 354 221 574 PB.8591.1 chr16 - 2190 19 novel_not_in_catalog ITFG1 novel NA NA NA NA no_subtype FALSE canonical NA NA 225 None 15 4 0 TRUE 0 0 NA B coding 612 1836 18 1853 PB.8591.2 chr16 - 3117 19 novel_not_in_catalog ITFG1 novel NA NA NA NA no_subtype FALSE canonical NA NA 219 None 2 13 0 TRUE 0 0 NA B coding 577 1731 12 1742 PB.7594.3 chr14 + 1630 4 full-splice_match APEX1 ENST00000553555.5 1603 4 3 -30 no_subtype FALSE canonical NA NA 856 None 3 3 0 FALSE 0 0 NA C coding 318 954 418 1371 PB.5804.4 chr10 - 2847 18 novel_in_catalog HERC4 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 140 None 2 2 1 FALSE 0 0 NA C coding 382 1146 249 1394 PB.2469.2 chr3 + 3730 28 full-splice_match ATP2C1 ENST00000510168.5 5067 28 220 1117 no_subtype FALSE canonical NA NA 2959 None 11 3 0 FALSE 0 0 NA C coding 919 2757 331 3087 PB.856.6 chr1 - 2725 7 novel_not_in_catalog SELL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 125 None 3 7 0 TRUE 0 0 NA C coding 332 996 84 1079 PB.4403.1 chr7 + 2691 7 full-splice_match YKT6 ENST00000223369.2 2696 7 -5 10 no_subtype FALSE canonical NA NA 653 None 31 5 0 FALSE 0 0 NA C coding 198 594 93 686 PB.4403.2 chr7 + 3568 2 full-splice_match YKT6 ENST00000421621.2 2463 2 -1107 2 no_subtype FALSE canonical NA NA 1524 None 2 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5804.3 chr10 - 3646 25 novel_not_in_catalog HERC4 novel NA NA NA NA no_subtype FALSE canonical NA NA 102 None 2 5 1 FALSE 0 0 NA C coding 1063 3189 211 3399 PB.1805.1 chr2 + 2709 1 incomplete-splice_match BMPR2 ENST00000374574.2 9683 12 6968 7 no_subtype FALSE canonical NA NA NA None 8 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8371.1 chr16 - 1604 6 full-splice_match SPSB3 ENST00000567868.5 1628 6 19 5 no_subtype FALSE canonical NA NA 37 None 15 14 0 FALSE 0 0 NA C coding 227 681 547 1227 PB.8371.2 chr16 - 1551 7 full-splice_match SPSB3 ENST00000566339.5 1784 7 221 12 no_subtype FALSE canonical NA NA 98 None 34 7 0 FALSE 0 0 NA C coding 355 1065 111 1175 PB.8371.3 chr16 - 1509 7 novel_not_in_catalog SPSB3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 53 None 4 9 2 TRUE 0 0 NA C coding 355 1065 66 1130 PB.5655.1 chr10 + 2814 1 intergenic novelGene_31 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2961.1 chr4 - 4098 7 novel_not_in_catalog HPGDS novel NA NA NA NA no_subtype FALSE canonical NA NA 42 None 2 42 0 TRUE 0 0 NA A coding 199 597 52 648 PB.7949.1 chr14 - 3059 7 incomplete-splice_match PPP1R13B ENST00000555391.5 2509 9 562 -1112 5prime_fragment FALSE canonical NA NA 235 None 9 17 0 FALSE 0 0 NA A coding 509 1527 157 1683 PB.2974.5 chr4 - 3485 1 novel_in_catalog DNAJB14 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9814.2 chr19 + 3726 11 novel_not_in_catalog MRI1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3448 None 2 32 3 TRUE 0 0 NA C coding 142 426 22 447 PB.9546.1 chr18 + 3280 6 novel_in_catalog KIAA1328 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 455 None 2 32 0 FALSE 0 0 NA A coding 227 681 8 688 PB.8122.1 chr15 + 2627 4 novel_not_in_catalog GCNT3 novel NA NA NA NA no_subtype FALSE canonical NA NA 432 None 14 2 1 TRUE 0 0 NA A coding 438 1314 863 2176 PB.5269.1 chr9 - 1706 4 full-splice_match SIGMAR1 ENST00000277010.8 1656 4 -55 5 no_subtype TRUE canonical NA NA 280 None 50 3 0 FALSE 0 0 NA C coding 223 669 130 798 PB.769.8 chr1 + 3387 4 novel_in_catalog MNDA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2599 None 2 9 0 FALSE 0 0 NA C coding 162 486 2315 2800 PB.769.9 chr1 + 3354 2 novel_not_in_catalog MNDA novel NA NA NA NA no_subtype FALSE canonical NA NA 2400 None 4 5 1 TRUE 0 0 NA C coding 107 321 2813 3133 PB.3580.1 chr5 - 532 5 full-splice_match RPS14 ENST00000401695.7 1599 5 12 1055 no_subtype FALSE canonical NA NA 33 None 7 1 0 FALSE 0 0 NA C coding 151 453 36 488 PB.769.3 chr1 + 1594 7 full-splice_match MNDA ENST00000368141.4 1752 7 155 3 no_subtype FALSE canonical NA NA 1282 None 299 3 0 FALSE 0 0 NA C coding 407 1221 107 1327 PB.10.1 chr1 - 2902 7 novel_not_in_catalog CCNL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 504 None 2 12 1 TRUE 0 0 NA A coding 298 894 1279 2172 PB.589.2 chr1 - 1562 2 novel_in_catalog BCAS2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 115 None 2 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7782.1 chr14 - 2912 9 novel_not_in_catalog DCAF5 novel NA NA NA NA no_subtype FALSE canonical NA NA 253 None 59 1 1 FALSE 0 0 NA B coding 616 1848 1022 2869 PB.769.4 chr1 + 771 2 full-splice_match MNDA ENST00000491210.1 797 2 -2 28 no_subtype FALSE canonical NA NA 209 None 4 0 0 FALSE 0 0 NA C coding 107 321 230 550 PB.8063.1 chr15 + 1964 10 full-splice_match SQRDL ENST00000260324.11 2003 10 6 33 no_subtype FALSE canonical NA NA 1675 None 2 4 0 FALSE 0 0 NA C coding 450 1350 381 1730 PB.9637.16 chr19 + 3114 14 novel_not_in_catalog ARHGAP45 novel NA NA NA NA no_subtype FALSE canonical NA NA 2160 None 2 21 1 FALSE 0 0 NA C coding 772 2316 189 2504 PB.9637.14 chr19 + 5499 14 novel_not_in_catalog ARHGAP45 novel NA NA NA NA no_subtype FALSE canonical NA NA 4532 None 3 30 1 TRUE 0 0 NA C coding 771 2313 2564 4876 PB.5269.2 chr9 - 1740 4 novel_not_in_catalog SIGMAR1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 241 None 2 7 1 FALSE 0 0 NA C coding 175 525 91 615 PB.2901.1 chr4 + 1462 13 novel_not_in_catalog ANXA3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1074 None 4 11 1 FALSE 0 0 NA B coding 323 969 163 1131 PB.6070.1 chr10 - 2625 2 incomplete-splice_match CHST15 ENST00000346248.7 4810 8 2098 87 5prime_fragment FALSE canonical NA NA 40 None 4 22 0 FALSE 0 0 NA A coding 112 336 1574 1909 PB.2901.2 chr4 + 1370 14 novel_not_in_catalog ANXA3 novel NA NA NA NA no_subtype TRUE canonical NA NA 1023 None 12 7 2 TRUE 0 0 NA B coding 323 969 112 1080 PB.5855.6 chr10 + 1721 1 incomplete-splice_match VCL ENST00000436396.1 4412 15 2682 10 no_subtype FALSE canonical NA NA NA None 6 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10839.1 chr22 - 5808 26 novel_not_in_catalog TUBGCP6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1286 None 31 12 2 TRUE 0 0 NA B coding 1111 3333 546 3878 PB.2977.9 chr4 - 2954 2 genic_intron novelGene_923 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 24 None 4 16 0 FALSE 0 0 NA B coding 126 378 505 882 PB.10839.3 chr22 - 5976 26 novel_not_in_catalog TUBGCP6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1299 None 2 20 1 TRUE 0 0 NA B coding 759 2277 559 2835 PB.10573.2 chr21 + 2788 17 novel_not_in_catalog MX1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2110 None 16 10 2 TRUE 0 0 NA B coding 340 1020 354 1373 PB.7384.4 chr13 + 3010 2 genic_intron novelGene_193 novel NA NA NA NA no_subtype FALSE canonical NA NA 1572 None 3 21 1 FALSE 0 0 NA A coding 99 297 1693 1989 PB.8279.1 chr15 - 1953 8 full-splice_match MFGE8 ENST00000268150.12 1937 8 6 -22 no_subtype FALSE canonical NA NA 159 None 33 4 0 FALSE 0 0 NA C coding 387 1161 87 1247 PB.1056.1 chr1 - 2120 14 incomplete-splice_match EPRS ENST00000366923.7 5014 32 2889 5 5prime_fragment FALSE canonical NA NA 156 None 4 1 0 FALSE 0 0 NA B coding 476 1428 490 1917 PB.7782.4 chr14 - 2995 10 novel_not_in_catalog DCAF5 novel NA NA NA NA no_subtype TRUE canonical NA NA 336 None 18 3 1 TRUE 0 0 NA B coding 616 1848 1105 2952 PB.567.2 chr1 + 1350 8 full-splice_match RAP1A ENST00000369709.3 5024 8 93 3581 no_subtype FALSE canonical NA NA 670 None 6 5 0 FALSE 0 0 NA C coding 184 552 87 638 PB.8379.1 chr16 + 5440 41 novel_not_in_catalog TSC2 novel NA NA NA NA no_subtype TRUE canonical NA NA 5171 None 24 3 0 FALSE 0 0 NA C coding 1741 5223 111 5333 PB.8379.2 chr16 + 5441 40 full-splice_match TSC2 ENST00000401874.6 5421 40 -9 -11 no_subtype FALSE canonical NA NA 5173 None 11 7 1 FALSE 0 0 NA C coding 1740 5220 116 5335 PB.8379.3 chr16 + 5760 41 novel_not_in_catalog TSC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 5499 None 10 5 0 FALSE 0 0 NA C coding 1741 5223 439 5661 PB.18.2 chr1 - 2636 19 full-splice_match PANK4 ENST00000378466.7 2677 19 28 13 no_subtype FALSE canonical NA NA 137 None 19 3 1 FALSE 0 0 NA C coding 773 2319 14 2332 PB.3850.8 chr6 - 2753 16 novel_in_catalog RGL2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 57 None 2 8 0 FALSE 0 0 NA C coding 453 1359 148 1506 PB.6836.1 chr12 - 2780 2 genic_intron novelGene_102 novel NA NA NA NA no_subtype FALSE canonical NA NA 2503 None 2 11 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.18.1 chr1 - 3073 19 novel_not_in_catalog PANK4 novel NA NA NA NA no_subtype FALSE canonical NA NA 148 None 12 13 1 TRUE 0 0 NA C coding 638 1914 1 1914 PB.18.4 chr1 - 2614 19 novel_in_catalog PANK4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 148 None 3 2 0 FALSE 0 0 NA C coding 623 1869 1 1869 PB.4990.10 chr8 - 3606 1 novel_in_catalog PAG1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 11 19 0 FALSE 0 0 NA C coding 123 369 2891 3259 PB.3850.1 chr6 - 2897 18 full-splice_match RGL2 ENST00000497454.5 3278 18 371 10 no_subtype FALSE canonical NA NA 84 None 36 6 0 FALSE 0 0 NA C coding 777 2331 126 2456 PB.10573.6 chr21 + 3486 2 novel_not_in_catalog MX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2904 None 19 23 1 TRUE 0 0 NA B coding 119 357 2131 2487 PB.3850.2 chr6 - 2722 17 full-splice_match RGL2 ENST00000437840.6 2687 17 -43 8 no_subtype FALSE canonical NA NA 104 None 6 5 0 FALSE 0 0 NA C coding 695 2085 195 2279 PB.3850.5 chr6 - 2963 17 novel_in_catalog RGL2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 73 None 4 8 0 FALSE 0 0 NA C coding 535 1605 115 1719 PB.3850.7 chr6 - 3187 17 novel_in_catalog RGL2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 105 None 5 14 0 FALSE 0 0 NA C coding 337 1011 1735 2745 PB.10573.7 chr21 + 1316 11 novel_not_in_catalog MX1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1225 None 3 4 2 TRUE 0 0 NA B coding 366 1098 218 1315 PB.606.1 chr1 + 6092 14 novel_not_in_catalog MAN1A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2528 None 3 31 1 TRUE 0 0 NA B coding 641 1923 736 2658 PB.8174.1 chr15 - 2313 1 genic_intron novelGene_630 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 16 0 FALSE 0 0 NA A coding 147 441 461 901 PB.10410.2 chr20 + 2021 13 novel_not_in_catalog PIGT novel NA NA NA NA no_subtype FALSE canonical NA NA 1887 None 3 3 1 TRUE 0 0 NA C coding 578 1734 17 1750 PB.10410.3 chr20 + 2684 3 novel_in_catalog PIGT novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2019 None 2 15 0 FALSE 0 0 NA C coding 170 510 1760 2269 PB.10410.1 chr20 + 2162 12 full-splice_match PIGT ENST00000279036.10 2235 12 67 6 no_subtype FALSE canonical NA NA 1497 None 12 3 0 FALSE 0 0 NA C coding 578 1734 14 1747 PB.1504.2 chr2 - 2704 4 novel_not_in_catalog MITD1 novel NA NA NA NA no_subtype TRUE canonical NA NA 24 None 5 10 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.5933.2 chr10 - 3435 19 novel_not_in_catalog ALDH18A1 novel NA NA NA NA no_subtype TRUE canonical NA NA 203 None 7 7 0 TRUE 0 0 NA B coding 793 2379 232 2610 PB.317.1 chr1 - 1975 8 novel_not_in_catalog MED8 novel NA NA NA NA no_subtype FALSE canonical NA NA 42 None 4 5 0 TRUE 0 0 NA C coding 179 537 303 839 PB.317.2 chr1 - 1957 7 full-splice_match MED8 ENST00000372457.8 1924 7 17 -50 no_subtype FALSE canonical NA NA 33 None 2 5 0 FALSE 0 0 NA C coding 268 804 28 831 PB.5933.1 chr10 - 3330 19 novel_not_in_catalog ALDH18A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 97 None 50 6 0 TRUE 0 0 NA B coding 795 2385 126 2510 PB.7052.1 chr12 - 2631 10 incomplete-splice_match R3HDM2 ENST00000393811.6 3778 14 1139 8 5prime_fragment FALSE canonical NA NA 242 None 2 15 0 FALSE 0 0 NA A coding 532 1596 30 1625 PB.4047.2 chr6 - 7587 42 full-splice_match ASCC3 ENST00000369162.6 8146 42 15 544 no_subtype FALSE canonical NA NA 289 None 3 13 1 FALSE 0 0 NA C coding 2202 6606 331 6936 PB.9133.4 chr17 - 2561 19 full-splice_match STAT5B ENST00000293328.7 5103 19 85 2457 no_subtype FALSE canonical NA NA 74 None 4 1 0 FALSE 0 0 NA C coding 787 2361 85 2445 PB.9133.1 chr17 - 5431 19 novel_not_in_catalog STAT5B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 89 None 2 20 0 TRUE 0 0 NA C coding 746 2238 100 2337 PB.6894.1 chr12 - 3015 6 novel_not_in_catalog DENND5B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 104 None 2 11 0 TRUE 0 0 NA A coding 41 123 548 670 PB.7254.8 chr12 - 3056 2 novel_in_catalog HVCN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 36 None 4 23 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.2102.3 chr3 + 2623 7 novel_not_in_catalog EXOG novel NA NA NA NA no_subtype FALSE canonical NA NA 581 None 2 7 0 FALSE 0 0 NA C coding 228 684 357 1040 PB.10711.2 chr22 - 2345 8 full-splice_match PISD ENST00000439502.6 1963 8 217 -599 no_subtype FALSE canonical NA NA 72 None 2 11 0 FALSE 0 0 NA C coding 409 1227 8 1234 PB.2102.1 chr3 + 2587 6 full-splice_match EXOG ENST00000287675.9 2792 6 196 9 no_subtype FALSE canonical NA NA 545 None 11 6 0 FALSE 0 0 NA C coding 265 795 210 1004 PB.2161.1 chr3 - 1341 7 full-splice_match ELP6 ENST00000296149.8 1401 7 56 4 no_subtype FALSE canonical NA NA 169 None 2 5 0 FALSE 0 0 NA A coding 266 798 116 913 PB.7581.3 chr13 + 1401 7 novel_not_in_catalog LAMP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 848 None 2 10 1 TRUE 0 0 NA B coding 182 546 21 566 PB.9292.4 chr17 - 1485 1 novel_in_catalog LIMD2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7436.1 chr13 - 2916 10 novel_not_in_catalog DCLK1 novel NA NA NA NA no_subtype TRUE canonical NA NA 262 None 3 11 0 TRUE 0 0 NA B coding 363 1089 282 1370 PB.10406.2 chr20 - 1357 1 antisense novelGene_STK4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10406.1 chr20 - 3629 2 antisense novelGene_STK4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2377 None 2 29 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.8836.2 chr17 + 2744 2 genic_intron novelGene_18 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 757 None 2 21 1 FALSE 0 0 NA A coding 109 327 1727 2053 PB.3754.5 chr6 - 3081 1 novel_in_catalog DTNBP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3754.2 chr6 - 1303 10 full-splice_match DTNBP1 ENST00000344537.9 1403 10 87 13 no_subtype FALSE canonical NA NA 142 None 5 3 0 FALSE 0 0 NA C coding 351 1053 87 1139 PB.1245.1 chr2 + 1617 12 full-splice_match BRE ENST00000379624.5 1657 12 36 4 no_subtype FALSE canonical NA NA 1169 None 50 1 0 FALSE 0 0 NA A coding 383 1149 82 1230 PB.3754.1 chr6 - 1400 13 novel_not_in_catalog DTNBP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 230 None 2 6 0 TRUE 0 0 NA C coding 351 1053 175 1227 PB.7779.1 chr14 - 2941 22 novel_not_in_catalog ACTN1 novel NA NA NA NA no_subtype TRUE canonical NA NA 192 None 3 0 0 TRUE 0 0 NA B coding 892 2676 88 2763 PB.5521.1 chr9 + 3082 26 full-splice_match LRSAM1 ENST00000300417.10 3146 26 58 6 no_subtype FALSE canonical NA NA 2360 None 6 16 0 FALSE 0 0 NA A coding 723 2169 315 2483 PB.2079.1 chr3 + 3867 9 novel_not_in_catalog GPD1L novel NA NA NA NA no_subtype FALSE canonical NA NA 977 None 96 15 0 TRUE 0 0 NA B coding 351 1053 19 1071 PB.1233.1 chr2 + 940 7 full-splice_match ATRAID ENST00000606999.5 956 7 20 -4 no_subtype FALSE canonical NA NA 623 None 2 1 0 FALSE 0 0 NA C coding 229 687 39 725 PB.1233.2 chr2 + 1484 7 novel_not_in_catalog ATRAID novel NA NA NA NA no_subtype FALSE canonical NA NA 1164 None 4 4 0 FALSE 0 0 NA C coding 171 513 754 1266 PB.1233.3 chr2 + 1632 6 novel_in_catalog ATRAID novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1307 None 3 6 0 FALSE 0 0 NA C coding 171 513 897 1409 PB.8398.7 chr16 + 2827 3 full-splice_match ZNF263 ENST00000575823.1 851 3 -400 -1576 no_subtype FALSE canonical NA NA 768 None 2 5 0 FALSE 0 0 NA C coding 160 480 265 744 PB.7785.2 chr14 + 2837 1 novel_in_catalog SLC39A9 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 8 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2936.4 chr4 + 2914 1 genic_intron novelGene_790 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10642.1 chr22 - 5884 1 novel_in_catalog RTN4R novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 35 0 FALSE 0 0 NA A coding 245 735 4855 5589 PB.2244.1 chr3 - 1739 10 full-splice_match GLT8D1 ENST00000266014.9 2149 10 401 9 no_subtype FALSE canonical NA NA 236 None 2 7 0 FALSE 0 0 NA A coding 371 1113 273 1385 PB.10314.2 chr20 + 1394 1 novel_in_catalog HCK novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7458.1 chr13 + 1440 3 genic_intron novelGene_426 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 896 None 2 10 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.6158.1 chr11 - 2772 2 full-splice_match OR51E2 ENST00000396950.3 2781 2 8 1 no_subtype FALSE canonical NA NA 182 None 4 9 0 FALSE 0 0 NA A coding 320 960 233 1192 PB.9097.1 chr17 + 3974 4 novel_not_in_catalog GRB7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2142 None 16 16 3 TRUE 0 0 NA B coding 123 369 3230 3598 PB.8398.4 chr16 + 3136 5 novel_in_catalog ZNF263 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1080 None 2 7 1 FALSE 0 0 NA C coding 644 1932 312 2243 PB.192.2 chr1 + 2051 9 full-splice_match STX12 ENST00000373943.8 3079 9 45 983 no_subtype FALSE canonical NA NA 812 None 3 7 0 FALSE 0 0 NA C coding 276 828 81 908 PB.1230.1 chr2 - 3147 7 genic CGREF1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 36 None 2 19 1 TRUE 0 0 NA A coding 112 336 195 530 PB.6438.2 chr11 + 2509 18 novel_not_in_catalog SCYL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2251 None 6 2 0 TRUE 0 0 NA B coding 784 2352 22 2373 PB.192.1 chr1 + 3021 10 novel_not_in_catalog STX12 novel NA NA NA NA no_subtype FALSE canonical NA NA 812 None 41 13 0 TRUE 0 0 NA C coding 276 828 81 908 PB.4514.1 chr7 - 2087 11 novel_not_in_catalog HEPACAM2 novel NA NA NA NA no_subtype TRUE canonical NA NA 98 None 2 6 0 TRUE 0 0 NA B coding 462 1386 20 1405 PB.5502.2 chr9 + 3356 3 novel_not_in_catalog ARPC5L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2207 None 5 15 1 TRUE 0 0 NA C coding 100 300 87 386 PB.1459.1 chr2 - 3822 7 full-splice_match REEP1 ENST00000165698.9 3857 7 28 7 no_subtype FALSE canonical NA NA 148 None 4 14 0 FALSE 0 0 NA A coding 201 603 117 719 PB.363.8 chr1 + 2640 22 novel_not_in_catalog OSBPL9 novel NA NA NA NA no_subtype FALSE canonical NA NA 1961 None 2 11 2 TRUE 0 0 NA B coding 388 1164 398 1561 PB.363.9 chr1 + 1444 1 genic_intron novelGene_512 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.916.1 chr1 + 1515 6 full-splice_match C1orf21 ENST00000235307.6 10265 6 54 8696 no_subtype FALSE canonical NA NA 708 None 2 1 0 FALSE 0 0 NA C coding 121 363 382 744 PB.3613.1 chr5 + 1559 1 novel_in_catalog ITK novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 14 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.363.4 chr1 + 2708 22 novel_not_in_catalog OSBPL9 novel NA NA NA NA no_subtype FALSE canonical NA NA 1963 None 18 11 1 TRUE 0 0 NA B coding 483 1449 115 1563 PB.9949.1 chr19 - 3328 14 full-splice_match CLIP3 ENST00000360535.8 3370 14 40 2 no_subtype TRUE canonical NA NA 130 None 14 3 0 FALSE 0 0 NA A coding 547 1641 189 1829 PB.363.6 chr1 + 2694 25 novel_not_in_catalog OSBPL9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1948 None 2 15 6 TRUE 0 0 NA B coding 378 1134 415 1548 PB.1678.2 chr2 + 1612 16 full-splice_match NOSTRIN ENST00000317647.11 2294 16 217 465 no_subtype FALSE canonical NA NA 1396 None 5 1 1 FALSE 0 0 NA A coding 506 1518 13 1530 PB.363.1 chr1 + 2797 24 novel_not_in_catalog OSBPL9 novel NA NA NA NA no_subtype FALSE canonical NA NA 2119 None 2 8 1 TRUE 0 0 NA B coding 567 1701 19 1719 PB.363.2 chr1 + 1658 1 genic_intron novelGene_510 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9123.1 chr17 - 1477 9 novel_not_in_catalog NT5C3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 371 None 3 3 1 TRUE 0 0 NA A coding 292 876 285 1160 PB.8259.1 chr15 - 3078 2 antisense novelGene_UBE2Q2P2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 497 None 6 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3613.3 chr5 + 4431 17 full-splice_match ITK ENST00000422843.7 4528 17 62 35 no_subtype FALSE canonical NA NA 1881 None 15 8 0 FALSE 0 0 NA C coding 620 1860 91 1950 PB.8079.1 chr15 - 2842 3 genic ATP8B4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 407 None 6 13 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.2410.2 chr3 + 3744 1 novel_in_catalog GTF2E1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3613.4 chr5 + 2787 6 novel_not_in_catalog ITK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1005 None 2 17 0 TRUE 0 0 NA C coding 206 618 127 744 PB.5529.1 chr9 - 1686 8 novel_not_in_catalog ST6GALNAC4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 215 None 19 4 1 TRUE 0 0 NA A coding 302 906 291 1196 PB.5070.1 chr8 - 2860 8 novel_not_in_catalog SYBU novel NA NA NA NA no_subtype TRUE canonical NA NA 178 None 10 2 0 TRUE 0 0 NA A coding 662 1986 155 2140 PB.1585.1 chr2 - 2763 21 novel_not_in_catalog SMPD4 novel NA NA NA NA no_subtype TRUE canonical NA NA 64 None 3 1 1 TRUE 0 0 NA A coding 798 2394 110 2503 PB.7959.143 chr14 - 2663 8 fusion IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 45 None 4 16 1 TRUE 0 0 NA A coding 265 795 455 1249 PB.1126.1 chr1 - 2607 1 genic TOMM20 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9516.1 chr18 - 3140 31 novel_not_in_catalog OSBPL1A novel NA NA NA NA no_subtype TRUE canonical NA NA 195 None 2 1 1 TRUE 0 0 NA B coding 950 2850 198 3047 PB.8606.1 chr16 + 2938 1 genic_intron novelGene_521 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1126.2 chr1 - 3274 5 full-splice_match TOMM20 ENST00000366607.4 3387 5 99 14 no_subtype FALSE canonical NA NA 243 None 38 23 0 FALSE 0 0 NA C coding 145 435 123 557 PB.387.1 chr1 + 5446 2 genic_intron novelGene_532 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5178 None 2 31 0 FALSE 0 0 NA A coding 101 303 3890 4192 PB.1962.2 chr2 + 4003 28 novel_not_in_catalog FARP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 3170 None 4 5 0 TRUE 0 0 NA B coding 1054 3162 124 3285 PB.3613.7 chr5 + 2786 2 genic_intron novelGene_1265 novel NA NA NA NA no_subtype FALSE canonical NA NA 2594 None 3 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5153.1 chr8 - 1472 10 novel_in_catalog TSTA3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 34 None 2 4 0 FALSE 0 0 NA C coding 161 483 46 528 PB.7368.1 chr12 + 2975 13 novel_in_catalog SFSWAP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2872 None 2 1 0 FALSE 0 0 NA C coding 541 1623 1352 2974 PB.5391.1 chr9 - 4058 11 novel_not_in_catalog TSTD2 novel NA NA NA NA no_subtype TRUE canonical NA NA 77 None 9 18 0 TRUE 0 0 NA A coding 516 1548 128 1675 PB.6233.1 chr11 + 1657 8 full-splice_match LDHA ENST00000422447.7 2416 8 178 581 no_subtype FALSE canonical NA NA 929 None 354 5 0 FALSE 0 0 NA C coding 332 996 96 1091 PB.1217.7 chr2 - 1548 13 novel_not_in_catalog ITSN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 212 None 2 0 0 TRUE 0 0 NA B coding 433 1299 249 1547 PB.6233.3 chr11 + 2946 7 novel_in_catalog LDHA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2220 None 11 13 0 FALSE 0 0 NA C coding 159 477 1906 2382 PB.6233.2 chr11 + 1394 4 genic LDHA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1294 None 2 7 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.1217.2 chr2 - 5995 40 novel_not_in_catalog ITSN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 233 None 14 9 0 TRUE 0 0 NA B coding 1656 4968 270 5237 PB.6233.4 chr11 + 2708 3 novel_in_catalog LDHA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1980 None 2 19 0 FALSE 0 0 NA C coding 129 387 1756 2142 PB.1217.1 chr2 - 6021 40 novel_not_in_catalog ITSN2 novel NA NA NA NA no_subtype TRUE canonical NA NA 217 None 5 7 1 TRUE 0 0 NA B coding 1669 5007 254 5260 PB.10138.2 chr19 - 1750 7 novel_in_catalog SIGLEC12 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 494 None 4 14 0 FALSE 0 0 NA B coding 468 1404 68 1471 PB.9304.1 chr17 - 1569 8 full-splice_match POLG2 ENST00000539111.6 1564 8 -12 7 no_subtype FALSE canonical NA NA 642 None 6 0 0 FALSE 0 0 NA A coding 485 1455 81 1535 PB.8410.8 chr16 - 5462 10 novel_not_in_catalog CORO7 novel NA NA NA NA no_subtype FALSE canonical NA NA 138 None 2 33 1 TRUE 0 0 NA B coding 262 786 79 864 PB.9264.1 chr17 - 5796 19 full-splice_match MTMR4 ENST00000323456.9 5839 19 42 1 no_subtype FALSE canonical NA NA 47 None 21 8 0 FALSE 0 0 NA A coding 1195 3585 84 3668 PB.884.3 chr1 + 5551 3 antisense novelGene_RFWD2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2687 None 2 37 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.7738.1 chr14 + 1608 7 full-splice_match JKAMP ENST00000261247.13 1726 7 101 17 no_subtype FALSE canonical NA NA 763 None 16 2 0 FALSE 0 0 NA C coding 311 933 47 979 PB.6156.1 chr11 + 3057 3 antisense novelGene_TRIM68_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1706 None 2 20 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.8410.1 chr16 - 3581 29 novel_not_in_catalog CORO7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 139 None 3 7 1 TRUE 0 0 NA B coding 388 1164 80 1243 PB.8410.2 chr16 - 3473 28 novel_not_in_catalog CORO7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 140 None 217 4 1 FALSE 0 0 NA B coding 926 2778 81 2858 PB.6156.2 chr11 + 3025 3 antisense novelGene_TRIM68_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1688 None 2 15 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.8410.4 chr16 - 3522 29 novel_in_catalog CORO7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 138 None 4 2 0 FALSE 0 0 NA B coding 535 1605 79 1683 PB.6024.1 chr10 - 2522 1 full-splice_match BBIP1 ENST00000605265.1 4712 1 4144 -1954 no_subtype FALSE canonical NA NA NA None 4 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8410.7 chr16 - 6458 1 antisense novelGene_VASN_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 37 0 FALSE 0 0 NA A coding 185 555 3504 4058 PB.946.9 chr1 + 2831 30 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2786 None 3 5 1 TRUE 0 0 NA B coding 877 2631 201 2831 PB.7959.148 chr14 - 1558 8 fusion IGHV3-23,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 117 None 2 10 4 TRUE 0 0 NA B coding 196 588 835 1422 PB.692.3 chr1 + 3027 9 full-splice_match INTS3 ENST00000368669.1 2889 9 -140 2 no_subtype FALSE canonical NA NA 2142 None 2 21 0 FALSE 0 0 NA C coding 405 1215 1003 2217 PB.8091.1 chr15 - 1547 1 novel_in_catalog MYO5A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10383.1 chr20 + 3651 21 full-splice_match TOP1 ENST00000361337.2 3738 21 79 8 no_subtype FALSE canonical NA NA 2366 None 4 5 0 FALSE 0 0 NA C coding 765 2295 172 2466 PB.4526.1 chr7 - 4306 24 novel_in_catalog TECPR1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 73 None 2 8 0 FALSE 0 0 NA B coding 1134 3402 93 3494 PB.8688.1 chr16 - 1714 11 novel_not_in_catalog DPEP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 107 None 9 3 0 FALSE 0 0 NA B coding 486 1458 153 1610 PB.2538.13 chr3 + 2547 1 incomplete-splice_match MBNL1 ENST00000497971.1 5051 2 2502 3 no_subtype FALSE canonical NA NA NA None 260 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3616.2 chr5 - 5775 2 genic CTB-109A12.1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2369 None 2 60 1 TRUE 0 0 NA A coding 137 411 5259 5669 PB.8430.2 chr16 + 1478 1 incomplete-splice_match C16orf72 ENST00000327827.11 5953 4 2502 1974 no_subtype FALSE canonical NA NA NA None 4 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4984.2 chr8 - 1575 3 novel_not_in_catalog PEX2 novel NA NA NA NA no_subtype FALSE canonical NA NA 160 None 9 4 0 FALSE 0 0 NA B coding 305 915 322 1236 PB.10383.3 chr20 + 3328 18 novel_in_catalog TOP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2044 None 3 10 0 FALSE 0 0 NA C coding 519 1557 588 2144 PB.4984.1 chr8 - 5493 2 genic PEX2 novel NA NA NA NA no_subtype TRUE canonical NA NA 291 None 5 56 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.4048.1 chr6 + 3377 1 genic_intron novelGene_945 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3984.4 chr6 + 2947 13 novel_not_in_catalog FAM135A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2872 None 2 10 2 TRUE 0 0 NA B coding 295 885 447 1331 PB.3984.3 chr6 + 3157 6 novel_not_in_catalog FAM135A novel NA NA NA NA no_subtype FALSE canonical NA NA 1726 None 5 18 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.3984.2 chr6 + 2996 12 novel_not_in_catalog FAM135A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2781 None 3 10 2 TRUE 0 0 NA B coding 295 885 486 1370 PB.3984.1 chr6 + 5909 24 novel_not_in_catalog FAM135A novel NA NA NA NA no_subtype FALSE canonical NA NA 4459 None 2 21 0 TRUE 0 0 NA B coding 1345 4035 628 4662 PB.397.1 chr1 - 1459 1 full-splice_match RP4-592A1.2 ENST00000427762.1 690 1 -17 -752 no_subtype FALSE canonical NA NA NA None 13 3 0 FALSE 0 0 NA A coding 114 342 154 495 PB.5353.2 chr9 - 745 4 full-splice_match ISCA1 ENST00000375991.8 1958 4 -10 1223 no_subtype FALSE canonical NA NA 162 None 18 1 0 FALSE 0 0 NA A coding 129 387 82 468 PB.3212.1 chr5 + 2141 19 novel_not_in_catalog WDR70 novel NA NA NA NA no_subtype FALSE canonical NA NA 1957 None 2 4 0 TRUE 0 0 NA A coding 654 1962 81 2042 PB.8146.1 chr15 - 2827 13 full-splice_match CSNK1G1 ENST00000634654.1 2485 13 12 -354 no_subtype FALSE canonical NA NA 72 None 4 7 1 FALSE 0 0 NA C coding 442 1326 348 1673 PB.364.5 chr1 - 2672 11 novel_in_catalog NRDC novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 466 None 2 4 0 FALSE 0 0 NA C coding 484 1452 126 1577 PB.4150.5 chr6 - 5697 28 novel_not_in_catalog MAP3K5 novel NA NA NA NA no_subtype FALSE canonical NA NA 382 None 2 18 3 TRUE 0 0 NA B coding 1033 3099 400 3498 PB.11114.1 chrX - 1741 1 incomplete-splice_match AMOT ENST00000304758.5 6888 12 4764 384 no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8901.1 chr17 - 3117 1 incomplete-splice_match ZBTB4 ENST00000380599.8 5866 4 1981 769 no_subtype FALSE canonical NA NA NA None 9 12 0 FALSE 0 0 NA A coding 381 1143 167 1309 PB.7585.1 chr13 + 1322 9 full-splice_match TMEM255B ENST00000375353.4 6100 9 19 4759 no_subtype TRUE canonical NA NA 821 None 2 4 1 FALSE 0 0 NA A coding 326 978 9 986 PB.4150.3 chr6 - 3639 29 novel_not_in_catalog MAP3K5 novel NA NA NA NA no_subtype FALSE canonical NA NA 194 None 2 2 1 TRUE 0 0 NA B coding 1170 3510 1 3510 PB.4150.2 chr6 - 3801 31 novel_not_in_catalog MAP3K5 novel NA NA NA NA no_subtype FALSE canonical NA NA 138 None 3 0 0 TRUE 0 0 NA B coding 1219 3657 16 3672 PB.1840.1 chr2 + 1339 1 genic_intron novelGene_1398 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.294.3 chr1 + 2468 2 genic_intron novelGene_405 novel NA NA NA NA no_subtype FALSE canonical NA NA 994 None 5 25 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4150.9 chr6 - 5477 1 novel_in_catalog MAP3K5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 51 0 FALSE 0 0 NA B coding 105 315 4438 4752 PB.4150.8 chr6 - 2734 1 genic_intron novelGene_1169 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7719.1 chr14 + 1558 4 full-splice_match MAPK1IP1L ENST00000395468.8 6480 4 79 4843 no_subtype FALSE canonical NA NA 824 None 5 0 0 FALSE 0 0 NA C coding 245 735 99 833 PB.1715.1 chr2 + 1198 10 full-splice_match MTX2 ENST00000249442.10 1364 10 65 101 no_subtype FALSE canonical NA NA 766 None 4 4 0 FALSE 0 0 NA A coding 263 789 147 935 PB.839.1 chr1 - 5643 3 novel_not_in_catalog CD247 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1367 None 2 37 1 TRUE 0 0 NA B coding 168 504 5117 5620 PB.6581.1 chr11 + 1587 2 full-splice_match PRSS23 ENST00000280258.5 4015 2 354 2074 no_subtype FALSE canonical NA NA 58 None 50 5 0 FALSE 0 0 NA A coding 383 1149 72 1220 PB.1058.1 chr1 + 1648 1 full-splice_match MORF4L1P1 ENST00000404582.2 967 1 -18 -663 no_subtype FALSE canonical NA NA NA None 54 5 0 FALSE 0 0 NA A coding 162 486 19 504 PB.3208.1 chr5 + 2608 2 genic_intron novelGene_358 novel NA NA NA NA no_subtype TRUE canonical NA NA 1497 None 2 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8438.2 chr16 - 1509 1 incomplete-splice_match LITAF ENST00000622633.4 2467 4 690 269 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8438.3 chr16 - 1179 3 full-splice_match LITAF ENST00000571459.5 677 3 -16 -486 no_subtype FALSE canonical NA NA 34 None 4 11 0 FALSE 0 0 NA C coding 115 345 298 642 PB.10624.13 chr22 - 5642 1 novel_in_catalog DGCR2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 37 0 FALSE 0 0 NA C coding 302 906 2184 3089 PB.8438.1 chr16 - 1336 4 full-splice_match LITAF ENST00000622633.4 2467 4 31 1100 no_subtype FALSE canonical NA NA 34 None 77 3 0 FALSE 0 0 NA C coding 161 483 40 522 PB.8438.6 chr16 - 2869 1 novel_in_catalog LITAF novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 17 0 FALSE 0 0 NA C coding 127 381 895 1275 PB.10624.14 chr22 - 5677 2 novel_not_in_catalog DGCR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 22 None 17 38 1 TRUE 0 0 NA C coding 302 906 2220 3125 PB.8438.4 chr16 - 1561 4 full-splice_match LITAF ENST00000339430.9 2356 4 -31 826 no_subtype FALSE canonical NA NA 259 None 3 7 0 FALSE 0 0 NA C coding 161 483 265 747 PB.10624.16 chr22 - 5861 1 novel_in_catalog DGCR2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 30 0 FALSE 0 0 NA C coding 142 426 999 1424 PB.9250.1 chr17 + 1892 13 full-splice_match SCPEP1 ENST00000262288.7 1942 13 52 -2 no_subtype FALSE canonical NA NA 1299 None 33 10 0 FALSE 0 0 NA C coding 452 1356 4 1359 PB.6400.1 chr11 + 3651 8 full-splice_match NAA40 ENST00000377793.8 3664 8 8 5 no_subtype TRUE canonical NA NA 665 None 7 20 0 FALSE 0 0 NA A coding 237 711 94 804 PB.7869.2 chr14 + 2316 2 novel_not_in_catalog SLC24A4 novel NA NA NA NA no_subtype FALSE canonical NA NA 980 None 4 12 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.4315.1 chr7 - 2851 1 genic_intron novelGene_174 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2820.1 chr4 + 1609 1 incomplete-splice_match LIMCH1 ENST00000512632.5 4792 23 3162 22 no_subtype FALSE canonical NA NA NA None 7 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5485.2 chr9 + 2617 11 full-splice_match PTGS1 ENST00000362012.6 4964 11 -56 2403 no_subtype TRUE canonical NA NA 1505 None 4 0 0 FALSE 0 0 NA C coding 599 1797 62 1858 PB.6565.2 chr11 - 2068 9 full-splice_match PRCP ENST00000313010.7 3090 9 154 868 no_subtype FALSE canonical NA NA 209 None 57 2 0 FALSE 0 0 NA A coding 496 1488 42 1529 PB.9250.2 chr17 + 2799 13 novel_not_in_catalog SCPEP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2220 None 2 36 5 FALSE 0 0 NA C coding 218 654 30 683 PB.9914.1 chr19 + 5821 8 novel_not_in_catalog ZNF507 novel NA NA NA NA no_subtype FALSE canonical NA NA 2728 None 5 22 0 TRUE 0 0 NA A coding 953 2859 234 3092 PB.6410.6 chr11 - 2199 17 full-splice_match RASGRP2 ENST00000377497.7 2221 17 10 12 no_subtype FALSE canonical NA NA 83 None 2 0 0 FALSE 0 0 NA C coding 609 1827 155 1981 PB.6410.7 chr11 - 2545 17 novel_in_catalog RASGRP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 429 None 2 2 0 FALSE 0 0 NA C coding 609 1827 501 2327 PB.6410.1 chr11 - 2228 17 full-splice_match RASGRP2 ENST00000394432.7 2304 17 54 22 no_subtype FALSE canonical NA NA 122 None 7 1 0 FALSE 0 0 NA C coding 609 1827 194 2020 PB.10335.1 chr20 - 2814 1 genic_intron novelGene_332 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4592.1 chr7 - 2144 5 full-splice_match SYPL1 ENST00000455385.6 2151 5 -16 23 no_subtype FALSE canonical NA NA 208 None 17 6 0 FALSE 0 0 NA C coding 241 723 140 862 PB.4870.1 chr8 + 2450 14 novel_not_in_catalog MAK16 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2312 None 2 16 4 TRUE 0 0 NA A coding 225 675 60 734 PB.8508.1 chr16 + 2627 1 intergenic novelGene_230 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4675.4 chr7 + 2773 17 novel_not_in_catalog MKLN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2033 None 2 9 2 FALSE 0 0 NA C coding 401 1203 993 2195 PB.4675.6 chr7 + 3258 1 genic_intron novelGene_1133 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4675.1 chr7 + 2457 18 full-splice_match MKLN1 ENST00000352689.10 11156 18 23 8676 no_subtype FALSE canonical NA NA 2103 None 3 1 0 FALSE 0 0 NA C coding 735 2205 18 2222 PB.1410.2 chr2 - 3309 8 novel_not_in_catalog PAIP2B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 176 None 3 18 1 TRUE 0 0 NA B coding 118 354 203 556 PB.6370.1 chr11 - 1586 12 full-splice_match FADS1 ENST00000350997.11 4525 12 286 2653 no_subtype FALSE canonical NA NA 322 None 2 1 0 FALSE 0 0 NA A coding 444 1332 119 1450 PB.4675.2 chr7 + 1615 13 incomplete-splice_match MKLN1 ENST00000494785.5 2386 17 8 763 3prime_fragment FALSE canonical NA NA 1534 None 2 0 0 FALSE 0 0 NA C coding 535 1605 10 1614 PB.5988.1 chr10 + 6376 40 novel_not_in_catalog GBF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 5540 None 17 6 0 FALSE 0 0 NA A coding 1855 5565 254 5818 PB.10616.1 chr22 - 1771 8 full-splice_match CECR5 ENST00000336737.8 1799 8 4 24 no_subtype FALSE canonical NA NA 148 None 11 1 0 FALSE 0 0 NA A coding 423 1269 23 1291 PB.11162.1 chrX + 1364 9 full-splice_match HPRT1 ENST00000298556.7 1407 9 40 3 no_subtype FALSE canonical NA NA 728 None 7 3 0 FALSE 0 0 NA A coding 218 654 120 773 PB.7387.1 chr13 + 2822 27 novel_not_in_catalog IFT88 novel NA NA NA NA no_subtype TRUE canonical NA NA 2436 None 7 5 0 TRUE 0 0 NA A coding 824 2472 84 2555 PB.3288.4 chr5 + 2684 3 novel_not_in_catalog KIF2A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2165 None 2 17 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.9692.1 chr19 + 3893 17 full-splice_match UHRF1 ENST00000624301.3 3898 17 3 2 no_subtype FALSE canonical NA NA 2400 None 21 11 0 FALSE 0 0 NA A coding 793 2379 166 2544 PB.9401.1 chr17 - 3535 1 incomplete-splice_match FLJ45079 ENST00000374983.3 4678 2 1142 2 no_subtype FALSE canonical NA NA NA None 8 12 0 FALSE 0 0 NA A coding 101 303 918 1220 PB.5167.2 chr8 - 1482 7 novel_not_in_catalog SHARPIN novel NA NA NA NA no_subtype FALSE canonical NA NA 210 None 5 10 1 FALSE 0 0 NA B coding 202 606 383 988 PB.6566.1 chr11 + 3551 1 antisense novelGene_RAB30_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3389.4 chr5 - 3190 19 full-splice_match ERAP1 ENST00000443439.6 4805 19 -28 1643 no_subtype FALSE canonical NA NA 78 None 31 6 0 FALSE 0 0 NA C coding 929 2787 132 2918 PB.3389.1 chr5 - 1743 1 incomplete-splice_match ERAP1 ENST00000443439.6 4805 19 3060 3 no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6363.11 chr11 - 2615 9 novel_not_in_catalog CYB561A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 2 10 0 TRUE 0 0 NA B coding 242 726 425 1150 PB.7004.1 chr12 - 1801 3 full-splice_match SMUG1 ENST00000508394.6 1697 3 24 -128 no_subtype FALSE canonical NA NA 20 None 6 3 0 FALSE 0 0 NA A coding 270 810 40 849 PB.6384.2 chr11 - 1393 7 novel_in_catalog UBXN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 231 None 8 1 0 FALSE 0 0 NA C coding 166 498 173 670 PB.6384.3 chr11 - 1278 8 novel_in_catalog UBXN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 221 None 2 1 0 FALSE 0 0 NA C coding 166 498 163 660 PB.1176.1 chr2 + 662 7 full-splice_match RPS7 ENST00000304921.9 786 7 120 4 no_subtype FALSE canonical NA NA 551 None 11 2 1 FALSE 0 0 NA A coding 194 582 45 626 PB.6384.4 chr11 - 1681 5 novel_in_catalog UBXN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 213 None 2 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6384.5 chr11 - 1591 6 novel_in_catalog UBXN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 209 None 3 4 1 FALSE 0 0 NA C coding 136 408 151 558 PB.1128.9 chr1 - 1715 15 incomplete-splice_match ARID4B ENST00000491632.5 3823 20 0 2108 internal_fragment FALSE canonical NA NA 400 None 22 0 0 FALSE 0 0 NA C coding 422 1266 450 1715 PB.9433.2 chr17 - 3429 10 incomplete-splice_match NPLOC4 ENST00000331134.10 4415 17 980 6 5prime_fragment FALSE canonical NA NA 70 None 2 20 0 FALSE 0 0 NA B coding 255 765 296 1060 PB.9433.1 chr17 - 3541 2 genic NPLOC4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3296 None 2 33 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.4494.1 chr7 - 2662 1 incomplete-splice_match STEAP4 ENST00000380079.8 9988 5 1783 5544 no_subtype FALSE canonical NA NA NA None 3 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4494.3 chr7 - 3607 4 novel_not_in_catalog STEAP4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 227 None 2 25 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.4494.5 chr7 - 2506 5 full-splice_match STEAP4 ENST00000380079.8 9988 5 1 7481 no_subtype FALSE canonical NA NA 99 None 17 7 0 FALSE 0 0 NA C coding 459 1377 102 1478 PB.4494.6 chr7 - 4422 6 novel_not_in_catalog STEAP4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 99 None 4 20 1 TRUE 0 0 NA C coding 459 1377 102 1478 PB.541.2 chr1 - 3348 1 incomplete-splice_match SORT1 ENST00000538502.5 6993 20 3562 84 no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8773.1 chr16 + 1918 6 full-splice_match OSGIN1 ENST00000393306.5 1940 6 18 4 no_subtype FALSE canonical NA NA 651 None 3 4 0 FALSE 0 0 NA A coding 477 1431 164 1594 PB.2371.1 chr3 + 1932 4 novel_in_catalog CD200 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 670 None 4 7 0 FALSE 0 0 NA A coding 159 477 199 675 PB.6017.1 chr10 + 4141 15 novel_not_in_catalog ADD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1902 None 10 7 0 TRUE 0 0 NA B coding 674 2022 171 2192 PB.8257.1 chr4 - 703 8 full-splice_match RPL9 ENST00000295955.13 750 8 34 13 no_subtype FALSE canonical NA NA 24 None 7 0 0 FALSE 0 0 NA C coding 192 576 26 601 PB.10785.1 chr22 - 1228 12 full-splice_match ST13 ENST00000216218.7 3595 12 396 1971 no_subtype FALSE canonical NA NA 196 None 226 0 0 FALSE 0 0 NA A coding 369 1107 87 1193 PB.1128.8 chr1 - 1925 16 incomplete-splice_match ARID4B ENST00000491632.5 3823 20 -10 1908 internal_fragment FALSE canonical NA NA 410 None 5 0 0 FALSE 0 0 NA C coding 488 1464 460 1923 PB.2351.1 chr3 + 1679 1 antisense novelGene_CBLB_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.629.11 chr1 - 2658 6 novel_in_catalog TXNIP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1437 None 3 19 0 FALSE 0 0 NA C coding 235 705 1435 2139 PB.629.10 chr1 - 2774 8 novel_not_in_catalog TXNIP novel NA NA NA NA no_subtype FALSE canonical NA NA 563 None 4 16 0 TRUE 0 0 NA C coding 275 825 314 1138 PB.8852.12 chr17 - 5461 19 novel_in_catalog ZZEF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 154 None 2 21 0 FALSE 0 0 NA A coding 866 2598 425 3022 PB.10431.2 chr20 - 3714 21 full-splice_match SULF2 ENST00000484875.5 4238 21 251 273 no_subtype FALSE canonical NA NA 318 None 2 9 0 FALSE 0 0 NA C coding 870 2610 419 3028 PB.8608.1 chr16 + 1594 1 full-splice_match RP11-297L17.6 ENST00000567701.1 739 1 418 -1273 no_subtype FALSE canonical NA NA NA None 193 10 0 FALSE 0 0 NA A coding 92 276 48 323 PB.4669.1 chr7 + 1461 1 genic_intron novelGene_1128 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5403.3 chr9 + 1683 1 incomplete-splice_match TGFBR1 ENST00000374990.6 5720 8 4034 4 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA B coding 100 300 1171 1470 PB.8384.1 chr16 + 3148 17 full-splice_match CCNF ENST00000397066.8 4283 17 69 1066 no_subtype FALSE canonical NA NA 1904 None 9 5 0 FALSE 0 0 NA A coding 786 2358 20 2377 PB.2232.2 chr3 - 3350 2 full-splice_match TLR9 ENST00000360658.2 3870 2 518 2 no_subtype FALSE canonical NA NA 119 None 9 2 0 FALSE 0 0 NA C coding 1032 3096 117 3212 PB.2980.3 chr4 - 3325 9 novel_not_in_catalog SLC39A8 novel NA NA NA NA no_subtype FALSE canonical NA NA 317 None 4 12 0 FALSE 0 0 NA C coding 460 1380 571 1950 PB.6017.4 chr10 + 4161 16 novel_not_in_catalog ADD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1928 None 7 6 0 TRUE 0 0 NA B coding 706 2118 101 2218 PB.4649.1 chr7 - 3073 24 novel_not_in_catalog TNPO3 novel NA NA NA NA no_subtype FALSE canonical NA NA 135 None 60 0 0 TRUE 0 0 NA C coding 923 2769 16 2784 PB.8217.2 chr15 - 3197 11 incomplete-splice_match PTPN9 ENST00000306726.6 3862 14 661 4 5prime_fragment FALSE canonical NA NA 74 None 2 12 0 FALSE 0 0 NA A coding 439 1317 240 1556 PB.4649.5 chr7 - 3422 23 full-splice_match TNPO3 ENST00000265388.9 4153 23 -197 928 no_subtype TRUE canonical NA NA 461 None 8 2 0 FALSE 0 0 NA C coding 923 2769 342 3110 PB.4649.7 chr7 - 3100 2 novel_not_in_catalog TNPO3 novel NA NA NA NA no_subtype FALSE canonical NA NA 441 None 2 24 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5582.2 chr9 + 2760 18 novel_in_catalog POMT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1894 None 2 12 0 FALSE 0 0 NA C coding 655 1965 102 2066 PB.5582.1 chr9 + 3017 20 full-splice_match POMT1 ENST00000402686.7 3038 20 13 8 no_subtype TRUE canonical NA NA 2150 None 6 13 0 FALSE 0 0 NA C coding 725 2175 148 2322 PB.8927.2 chr17 - 2216 4 genic_intron novelGene_60 novel NA NA NA NA no_subtype TRUE canonical NA NA 229 None 2 11 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.6091.1 chr10 + 2618 11 full-splice_match GLRX3 ENST00000331244.9 1302 11 6 -1322 no_subtype FALSE canonical NA NA 973 None 2 11 0 FALSE 0 0 NA A coding 335 1005 17 1021 PB.5056.3 chr8 + 1452 1 genic_intron novelGene_939 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8262.1 chr15 - 3134 8 full-splice_match BTBD1 ENST00000261721.8 3297 8 133 30 no_subtype FALSE canonical NA NA 471 None 15 15 0 FALSE 0 0 NA C coding 482 1446 71 1516 PB.4138.1 chr6 + 2976 7 full-splice_match TBPL1 ENST00000237264.8 4228 7 32 1220 no_subtype FALSE canonical NA NA 724 None 8 17 0 FALSE 0 0 NA A coding 186 558 244 801 PB.5587.15 chr9 - 3034 1 genic_intron novelGene_1139 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6517.4 chr11 + 2701 10 novel_in_catalog RELT novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1506 None 2 11 0 FALSE 0 0 NA C coding 430 1290 262 1551 PB.9848.1 chr19 + 2241 13 novel_not_in_catalog AP1M1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1391 None 14 6 1 TRUE 0 0 NA C coding 423 1269 81 1349 PB.9848.2 chr19 + 2827 13 novel_not_in_catalog AP1M1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1978 None 3 13 2 TRUE 0 0 NA C coding 339 1017 117 1133 PB.9848.3 chr19 + 3277 12 novel_not_in_catalog AP1M1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2426 None 2 12 1 TRUE 0 0 NA C coding 234 702 116 817 PB.9848.4 chr19 + 1977 4 full-splice_match AP1M1 ENST00000589991.1 625 4 0 -1352 no_subtype FALSE canonical NA NA 381 None 2 12 1 FALSE 0 0 NA C coding 133 399 115 513 PB.9848.5 chr19 + 3244 12 novel_not_in_catalog AP1M1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2403 None 4 11 2 TRUE 0 0 NA C coding 293 879 96 974 PB.968.1 chr1 - 5369 27 full-splice_match KDM5B ENST00000367265.7 10345 27 1022 3954 no_subtype FALSE canonical NA NA 347 None 5 2 0 FALSE 0 0 NA C coding 1544 4632 144 4775 PB.6517.3 chr11 - 1743 1 genic_intron novelGene_687 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA A coding 153 459 59 517 PB.8262.2 chr15 - 3239 9 novel_in_catalog BTBD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 464 None 2 17 0 FALSE 0 0 NA C coding 354 1062 64 1125 PB.7444.1 chr13 + 2648 19 full-splice_match COG6 ENST00000455146.7 3563 19 16 899 no_subtype FALSE canonical NA NA 1860 None 12 8 0 FALSE 0 0 NA A coding 657 1971 35 2005 PB.9231.1 chr17 - 1446 7 full-splice_match LRRC59 ENST00000225972.7 2910 7 61 1403 no_subtype FALSE canonical NA NA 280 None 248 4 0 FALSE 0 0 NA A coding 307 921 176 1096 PB.1067.1 chr1 + 2048 1 genic_intron novelGene_1402 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4808.4 chr8 - 3504 11 novel_in_catalog MTUS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2246 None 2 3 0 FALSE 0 0 NA C coding 1116 3348 156 3503 PB.3360.5 chr5 + 2929 1 genic_intron novelGene_763 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4358.1 chr7 + 6879 17 novel_not_in_catalog AVL9 novel NA NA NA NA no_subtype FALSE canonical NA NA 2770 None 2 44 2 TRUE 0 0 NA A coding 648 1944 141 2084 PB.4990.8 chr8 - 2749 1 genic_intron novelGene_751 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 33 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5700.1 chr10 + 3721 4 full-splice_match TMEM236 ENST00000377495.1 5464 4 -31 1774 no_subtype FALSE canonical NA NA 547 None 9 15 0 FALSE 0 0 NA A coding 351 1053 76 1128 PB.7811.1 chr14 - 5730 13 novel_not_in_catalog ABCD4 novel NA NA NA NA no_subtype FALSE canonical NA NA 97 None 2 51 1 FALSE 0 0 NA B coding 198 594 3698 4291 PB.7811.2 chr14 - 2869 4 genic ABCD4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 253 None 9 20 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.1343.1 chr2 - 4062 17 novel_not_in_catalog PPP4R3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 39 None 2 10 0 TRUE 0 0 NA B coding 796 2388 140 2527 PB.4589.2 chr7 + 2725 13 novel_in_catalog RINT1 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical NA NA 2174 None 2 7 1 FALSE 0 0 NA C coding 506 1518 117 1634 PB.4589.1 chr7 + 2808 15 full-splice_match RINT1 ENST00000257700.6 2976 15 160 8 no_subtype FALSE canonical NA NA 2257 None 58 8 0 FALSE 0 0 NA C coding 792 2376 72 2447 PB.4040.1 chr6 - 1689 4 novel_not_in_catalog NDUFAF4 novel NA NA NA NA no_subtype TRUE canonical NA NA 180 None 6 5 0 TRUE 0 0 NA A coding 175 525 45 569 PB.7395.7 chr13 + 2779 1 incomplete-splice_match SPATA13 ENST00000343003.10 6405 11 3182 445 no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7395.5 chr13 + 2786 13 novel_not_in_catalog SPATA13 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1485 None 2 16 5 TRUE 0 0 NA C coding 304 912 747 1658 PB.7395.3 chr13 + 2898 10 full-splice_match SPATA13 ENST00000399949.6 3026 10 122 6 no_subtype FALSE canonical NA NA 1597 None 28 8 0 FALSE 0 0 NA C coding 574 1722 49 1770 PB.7395.2 chr13 + 2902 10 incomplete-splice_match SPATA13 ENST00000382095.8 6665 12 589 3174 internal_fragment FALSE canonical NA NA 1601 None 64 4 0 FALSE 0 0 NA C coding 561 1683 92 1774 PB.7395.1 chr13 + 2966 11 novel_not_in_catalog SPATA13 novel NA NA NA NA no_subtype FALSE canonical NA NA 1660 None 16 5 0 FALSE 0 0 NA C coding 598 1794 40 1833 PB.7959.206 chr14 - 1540 10 fusion IGHG1,IGHV3-7,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 95 None 2 19 4 TRUE 0 0 NA B coding 196 588 819 1406 PB.1615.4 chr2 + 1010 1 genic_intron novelGene_1205 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10790.1 chr22 - 3002 16 full-splice_match RANGAP1 ENST00000356244.7 3060 16 44 14 no_subtype FALSE canonical NA NA 222 None 64 6 0 FALSE 0 0 NA C coding 587 1761 261 2021 PB.10790.2 chr22 - 3275 16 novel_in_catalog RANGAP1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 490 None 2 10 0 FALSE 0 0 NA C coding 642 1926 364 2289 PB.10582.4 chr21 - 2623 13 novel_not_in_catalog WDR4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 127 None 2 9 0 TRUE 0 0 NA B coding 379 1137 39 1175 PB.10582.5 chr21 - 2661 13 novel_not_in_catalog WDR4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 144 None 2 10 1 TRUE 0 0 NA B coding 266 798 442 1239 PB.10582.2 chr21 - 2723 13 novel_not_in_catalog WDR4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 133 None 19 9 0 TRUE 0 0 NA B coding 412 1236 45 1280 PB.10582.3 chr21 - 2713 13 novel_not_in_catalog WDR4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 144 None 5 8 0 TRUE 0 0 NA B coding 412 1236 56 1291 PB.3393.2 chr5 - 1809 10 full-splice_match RIOK2 ENST00000283109.7 3922 10 41 2072 no_subtype FALSE canonical NA NA 94 None 14 6 0 FALSE 0 0 NA C coding 552 1656 29 1684 PB.5397.3 chr9 - 2575 20 novel_not_in_catalog CORO2A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 88 None 9 9 4 TRUE 0 0 NA B coding 525 1575 89 1663 PB.5397.1 chr9 - 2577 20 novel_not_in_catalog CORO2A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 94 None 6 8 3 TRUE 0 0 NA B coding 525 1575 95 1669 PB.1343.7 chr2 - 3903 18 novel_not_in_catalog PPP4R3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 53 None 3 9 1 TRUE 0 0 NA B coding 518 1554 154 1707 PB.8802.1 chr16 - 1719 3 full-splice_match SNAI3 ENST00000332281.5 1732 3 3 10 no_subtype TRUE canonical NA NA 160 None 4 3 0 FALSE 0 0 NA A coding 292 876 85 960 PB.3585.1 chr5 + 1479 6 novel_not_in_catalog GPX3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1382 None 4 6 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.8801.1 chr16 - 1819 10 full-splice_match MVD ENST00000301012.7 1823 10 0 4 no_subtype FALSE canonical NA NA 100 None 24 8 0 FALSE 0 0 NA A coding 400 1200 31 1230 PB.9602.1 chr18 + 2540 13 novel_not_in_catalog CNDP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1419 None 72 6 1 TRUE 0 0 NA B coding 475 1425 62 1486 PB.3240.1 chr5 + 3246 4 genic MRPS30 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2240 None 2 20 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.3240.2 chr5 + 1430 5 full-splice_match MRPS30 ENST00000507110.5 1678 5 30 218 no_subtype FALSE canonical NA NA 1038 None 26 4 0 FALSE 0 0 NA C coding 439 1317 9 1325 PB.3240.3 chr5 + 3849 6 novel_not_in_catalog MRPS30 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1672 None 2 22 1 TRUE 0 0 NA C coding 439 1317 22 1338 PB.3240.4 chr5 + 2846 4 novel_not_in_catalog MRPS30 novel NA NA NA NA no_subtype FALSE canonical NA NA 2452 None 4 18 0 FALSE 0 0 NA C coding 267 801 9 809 PB.3240.5 chr5 + 2877 4 novel_in_catalog MRPS30 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2483 None 4 15 0 FALSE 0 0 NA C coding 249 747 2024 2770 PB.2665.1 chr3 - 3383 16 novel_not_in_catalog P3H2 novel NA NA NA NA no_subtype FALSE canonical NA NA 659 None 2 12 0 TRUE 0 0 NA A coding 708 2124 180 2303 PB.974.1 chr1 - 1829 10 full-splice_match CHI3L1 ENST00000255409.7 1792 10 -44 7 no_subtype FALSE canonical NA NA 195 None 16 2 0 FALSE 0 0 NA A coding 383 1149 171 1319 PB.6251.4 chr11 + 3520 2 genic_intron novelGene_309 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2328 None 10 25 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1077.1 chr1 - 2855 1 incomplete-splice_match ENAH ENST00000366844.7 13168 15 10308 6 no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6251.1 chr11 + 1550 11 novel_not_in_catalog ELP4 novel NA NA NA NA no_subtype TRUE canonical NA NA 1173 None 3 2 1 TRUE 0 0 NA B coding 235 705 598 1302 PB.1764.1 chr2 - 2116 2 full-splice_match SDPR ENST00000304141.4 3229 2 171 942 no_subtype FALSE canonical NA NA 642 None 125 4 0 FALSE 0 0 NA A coding 425 1275 160 1434 PB.6251.2 chr11 + 6406 11 novel_not_in_catalog ELP4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1155 None 2 35 2 TRUE 0 0 NA B coding 185 555 11 565 PB.2738.1 chr4 - 1166 5 novel_not_in_catalog GRPEL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 91 None 14 6 0 TRUE 0 0 NA A coding 217 651 30 680 PB.4271.1 chr7 - 2934 14 full-splice_match BRAT1 ENST00000340611.8 2915 14 -5 -14 no_subtype TRUE canonical NA NA 246 None 21 6 0 FALSE 0 0 NA A coding 821 2463 263 2725 PB.6575.1 chr11 + 1361 1 antisense novelGene_PICALM_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6575.2 chr11 + 3083 2 genic_intron novelGene_780 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 514 None 3 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2663.1 chr3 + 2849 1 incomplete-splice_match LPP ENST00000617246.4 18220 11 3444 11928 no_subtype FALSE canonical NA NA NA None 13 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5467.1 chr9 + 5997 1 genic_intron novelGene_1022 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1394.1 chr2 - 2700 20 novel_not_in_catalog GFPT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 183 None 46 5 0 TRUE 0 0 NA B coding 681 2043 180 2222 PB.1394.2 chr2 - 3037 2 novel_not_in_catalog GFPT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2594 None 4 15 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.4663.1 chr7 - 1848 1 full-splice_match MIR29A ENST00000362111.4 64 1 -656 -1128 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1468.1 chr2 - 1084 4 full-splice_match KRCC1 ENST00000347055.3 1753 4 -36 705 no_subtype FALSE canonical NA NA 140 None 15 2 0 FALSE 0 0 NA A coding 218 654 431 1084 PB.7389.1 chr13 - 4093 8 full-splice_match LATS2 ENST00000382592.4 5511 8 11 1407 no_subtype FALSE canonical NA NA 191 None 3 9 0 FALSE 0 0 NA A coding 1088 3264 396 3659 PB.3152.1 chr4 - 1574 12 full-splice_match UFSP2 ENST00000264689.10 1630 12 22 34 no_subtype FALSE canonical NA NA 98 None 14 4 0 FALSE 0 0 NA A coding 469 1407 96 1502 PB.134.1 chr1 - 926 3 full-splice_match ID3 ENST00000374561.5 1251 3 313 12 no_subtype FALSE canonical NA NA 355 None 5 7 0 FALSE 0 0 NA A coding 119 357 56 412 PB.2410.1 chr3 + 3036 6 novel_not_in_catalog GTF2E1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1478 None 26 11 1 TRUE 0 0 NA B coding 439 1317 59 1375 PB.7189.2 chr12 + 3780 18 novel_not_in_catalog SCYL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2175 None 4 9 0 TRUE 0 0 NA B coding 929 2787 31 2817 PB.2718.1 chr4 + 3850 16 novel_not_in_catalog ADD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1961 None 5 16 0 TRUE 0 0 NA B coding 737 2211 101 2311 PB.2718.2 chr4 + 4033 17 novel_not_in_catalog ADD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2147 None 2 16 0 TRUE 0 0 NA B coding 799 2397 101 2497 PB.6712.3 chr11 + 3356 18 novel_not_in_catalog VWA5A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2324 None 7 6 1 TRUE 0 0 NA C coding 786 2358 44 2401 PB.6712.2 chr11 + 3497 19 novel_not_in_catalog VWA5A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2433 None 32 5 1 TRUE 0 0 NA C coding 786 2358 153 2510 PB.6712.1 chr11 + 3365 18 full-splice_match VWA5A ENST00000392748.5 3419 18 51 3 no_subtype FALSE canonical NA NA 2324 None 11 4 0 FALSE 0 0 NA C coding 786 2358 44 2401 PB.6854.1 chr12 - 3409 4 full-splice_match LMO3 ENST00000354662.5 3574 4 113 52 no_subtype FALSE canonical NA NA 166 None 5 7 0 FALSE 0 0 NA A coding 145 435 175 609 PB.6712.7 chr11 + 3440 18 novel_in_catalog VWA5A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2413 None 7 4 0 FALSE 0 0 NA C coding 786 2358 133 2490 PB.7598.1 chr14 + 947 2 full-splice_match RNASE6 ENST00000304677.2 1061 2 105 9 no_subtype FALSE canonical NA NA 183 None 13 1 0 FALSE 0 0 NA A coding 150 450 189 638 PB.6712.5 chr11 + 3086 18 novel_not_in_catalog VWA5A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2874 None 2 5 1 TRUE 0 0 NA C coding 338 1014 159 1172 PB.6712.4 chr11 + 2645 19 full-splice_match VWA5A ENST00000456829.6 4388 19 99 1644 no_subtype FALSE canonical NA NA 2433 None 29 0 0 FALSE 0 0 NA C coding 786 2358 153 2510 PB.3534.1 chr5 + 1882 20 full-splice_match IK ENST00000417647.6 1962 20 79 1 no_subtype FALSE non_canonical NA NA 1706 None 112 0 0 FALSE 0 0 NA A coding 557 1671 61 1731 PB.8144.1 chr15 - 1659 1 incomplete-splice_match CSNK1G1 ENST00000303052.12 8179 12 6302 219 no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5344.2 chr9 - 2818 10 full-splice_match UBQLN1 ENST00000257468.11 2299 10 31 -550 no_subtype FALSE canonical NA NA 404 None 6 6 0 FALSE 0 0 NA C coding 525 1575 333 1907 PB.5344.1 chr9 - 2473 11 full-splice_match UBQLN1 ENST00000376395.8 4118 11 171 1474 no_subtype FALSE canonical NA NA 533 None 32 15 0 FALSE 0 0 NA C coding 589 1767 354 2120 PB.1649.11 chr2 - 1367 13 full-splice_match PRPF40A ENST00000545856.5 1358 13 -13 4 no_subtype FALSE canonical NA NA 191 None 2 3 1 FALSE 0 0 NA C coding 447 1341 27 1367 PB.10054.1 chr19 + 1560 1 incomplete-splice_match BLOC1S3 ENST00000433642.2 2601 2 1035 7 no_subtype FALSE canonical NA NA NA None 6 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2971.2 chr4 + 2032 1 genic DAPP1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1738.2 chr2 - 1439 8 full-splice_match TFPI ENST00000426055.5 1161 8 57 -335 no_subtype FALSE canonical NA NA 236 None 5 3 0 FALSE 0 0 NA C coding 300 900 251 1150 PB.1821.1 chr2 + 730 6 full-splice_match EEF1B2 ENST00000392222.6 1098 6 356 12 no_subtype FALSE canonical NA NA 542 None 13 0 0 FALSE 0 0 NA A coding 225 675 20 694 PB.5621.2 chr9 + 2643 12 novel_in_catalog PMPCA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1988 None 5 10 0 FALSE 0 0 NA C coding 275 825 1331 2155 PB.7255.1 chr12 + 6146 5 antisense novelGene_PPP1CC_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4410 None 4 38 4 FALSE 0 0 NA A non_coding NA NA NA NA PB.1933.1 chr2 + 3460 3 genic_intron novelGene_1416 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2075 None 3 20 1 FALSE 0 0 NA A coding 103 309 2358 2666 PB.3719.2 chr6 - 1349 10 novel_not_in_catalog ECI2 novel NA NA NA NA no_subtype FALSE canonical NA NA 64 None 3 4 1 TRUE 0 0 NA B coding 183 549 21 569 PB.5621.1 chr9 + 2080 13 full-splice_match PMPCA ENST00000371717.7 2174 13 88 6 no_subtype FALSE canonical NA NA 1419 None 21 6 0 FALSE 0 0 NA C coding 525 1575 12 1586 PB.7707.2 chr14 + 1551 14 full-splice_match PSMC6 ENST00000606149.5 1560 14 7 2 no_subtype FALSE canonical NA NA 1060 None 50 2 0 FALSE 0 0 NA C coding 389 1167 10 1176 PB.7707.3 chr14 + 1760 14 novel_not_in_catalog PSMC6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1268 None 2 3 0 FALSE 0 0 NA C coding 394 1182 203 1384 PB.9146.1 chr17 + 3084 11 full-splice_match PSME3 ENST00000590720.5 998 11 81 -2167 no_subtype FALSE canonical NA NA 836 None 127 4 0 FALSE 0 0 NA A coding 254 762 153 914 PB.1649.10 chr2 - 1230 13 incomplete-splice_match PRPF40A ENST00000410080.5 8048 26 572 6246 internal_fragment FALSE canonical NA NA 54 None 5 2 0 FALSE 0 0 NA C coding 405 1215 16 1230 PB.8579.4 chr16 + 5700 31 novel_not_in_catalog ITGAD novel NA NA NA NA no_subtype FALSE canonical NA NA 4216 None 4 18 2 TRUE 0 0 NA C coding 1161 3483 25 3507 PB.114.1 chr1 + 2564 1 antisense novelGene_EIF4G3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8319.1 chr15 - 3035 2 genic_intron novelGene_896 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 405 None 2 22 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6813.1 chr12 + 1688 3 novel_in_catalog KLRG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 372 None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7590.1 chr14 - 1818 10 full-splice_match TTC5 ENST00000258821.7 4779 10 43 2918 no_subtype FALSE canonical NA NA 65 None 25 6 0 FALSE 0 0 NA A coding 440 1320 15 1334 PB.7973.1 chr15 - 3792 8 novel_not_in_catalog MTMR10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 27 None 2 26 1 TRUE 0 0 NA B coding 387 1161 132 1292 PB.9245.2 chr17 - 1849 1 novel_in_catalog MMD novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C coding 102 306 468 773 PB.9245.1 chr17 - 1036 7 full-splice_match MMD ENST00000262065.7 2735 7 58 1641 no_subtype FALSE canonical NA NA 265 None 34 2 0 FALSE 0 0 NA C coding 238 714 240 953 PB.3455.5 chr5 + 2947 8 novel_not_in_catalog CDC42SE2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1600 None 88 23 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.3155.1 chr4 - 3899 16 novel_not_in_catalog SORBS2 novel NA NA NA NA no_subtype TRUE canonical NA NA 361 None 3 17 1 TRUE 0 0 NA C coding 492 1476 338 1813 PB.9358.1 chr17 - 1409 4 full-splice_match HN1 ENST00000356033.8 1519 4 164 -54 no_subtype FALSE canonical NA NA 170 None 26 5 1 FALSE 0 0 NA A coding 181 543 115 657 PB.3155.3 chr4 - 1191 6 full-splice_match SORBS2 ENST00000492810.5 780 6 0 -411 no_subtype FALSE canonical NA NA 129 None 27 1 0 FALSE 0 0 NA C coding 154 462 106 567 PB.3155.2 chr4 - 3561 15 novel_in_catalog SORBS2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 118 None 8 18 0 FALSE 0 0 NA C coding 492 1476 95 1570 PB.1724.1 chr2 + 1513 6 full-splice_match UBE2E3 ENST00000410062.8 1570 6 31 26 no_subtype FALSE canonical NA NA 888 None 10 1 0 FALSE 0 0 NA A coding 207 621 363 983 PB.3155.4 chr4 - 3118 1 genic_intron novelGene_1350 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1816.1 chr2 + 1487 1 incomplete-splice_match NRP2 ENST00000272849.7 5909 16 4415 8 no_subtype FALSE canonical NA NA NA None 4 5 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6018.1 chr10 - 2847 2 genic_intron novelGene_985 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 127 None 4 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2090.4 chr3 - 5631 11 incomplete-splice_match TRANK1 ENST00000429976.5 10481 23 4848 2 5prime_fragment FALSE canonical NA NA 17 None 3 6 0 FALSE 0 0 NA B coding 1299 3897 279 4175 PB.2678.9 chr3 - 2770 1 novel_in_catalog ACAP2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 19 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2090.3 chr3 - 6087 12 incomplete-splice_match TRANK1 ENST00000429976.5 10481 23 4391 3 5prime_fragment FALSE canonical NA NA 274 None 13 8 0 FALSE 0 0 NA B coding 1519 4557 76 4632 PB.5364.1 chr9 - 2695 15 full-splice_match SPTLC1 ENST00000262554.6 1894 15 -4 -797 no_subtype FALSE canonical NA NA 67 None 72 8 0 FALSE 0 0 NA C coding 473 1419 11 1429 PB.2234.1 chr3 - 2086 9 full-splice_match WDR82 ENST00000296490.7 4293 9 257 1950 no_subtype FALSE canonical NA NA 186 None 18 5 0 FALSE 0 0 NA A coding 313 939 26 964 PB.9703.8 chr19 - 2977 16 novel_not_in_catalog RANBP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 28 8 0 TRUE 0 0 NA C coding 286 858 654 1511 PB.3478.2 chr5 + 3130 11 novel_not_in_catalog TCF7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1886 None 4 19 1 TRUE 0 0 NA B coding 300 900 329 1228 PB.10687.2 chr22 - 3936 24 novel_not_in_catalog AP1B1 novel NA NA NA NA no_subtype FALSE canonical NA NA 129 None 320 4 0 TRUE 0 0 NA B coding 939 2817 157 2973 PB.10687.3 chr22 - 4119 25 novel_not_in_catalog AP1B1 novel NA NA NA NA no_subtype TRUE canonical NA NA 129 None 10 5 1 TRUE 0 0 NA B coding 942 2826 157 2982 PB.3478.7 chr5 + 2690 10 novel_not_in_catalog TCF7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1461 None 2 22 1 TRUE 0 0 NA B coding 256 768 36 803 PB.3478.6 chr5 + 2974 11 novel_not_in_catalog TCF7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1730 None 2 26 3 TRUE 0 0 NA B coding 269 807 276 1082 PB.3370.3 chr5 - 3261 10 novel_in_catalog MEF2C novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 47 None 2 5 0 FALSE 0 0 NA B coding 433 1299 187 1485 PB.3831.1 chr6 - 1303 11 full-splice_match NELFE ENST00000375429.7 1584 11 137 144 no_subtype TRUE canonical NA NA 82 None 10 3 0 FALSE 0 0 NA A coding 380 1140 91 1230 PB.7623.1 chr14 - 2593 22 full-splice_match AP1G2 ENST00000397120.7 2609 22 15 1 no_subtype FALSE canonical NA NA 50 None 11 4 0 FALSE 0 0 NA C coding 785 2355 56 2410 PB.9703.1 chr19 - 1804 16 full-splice_match RANBP3 ENST00000034275.12 1762 16 -7 -35 no_subtype FALSE canonical NA NA 33 None 33 3 1 FALSE 0 0 NA C coding 499 1497 12 1508 PB.7623.3 chr14 - 2736 23 novel_not_in_catalog AP1G2 novel NA NA NA NA no_subtype FALSE canonical NA NA 81 None 2 3 0 FALSE 0 0 NA C coding 495 1485 87 1571 PB.8688.6 chr16 - 2952 1 novel_in_catalog DPEP2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 10 8 0 FALSE 0 0 NA B coding 115 345 1958 2302 PB.4882.1 chr8 - 3962 18 novel_not_in_catalog FGFR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 651 None 2 17 1 FALSE 0 0 NA A coding 386 1158 2046 3203 PB.7623.4 chr14 - 3039 21 novel_in_catalog AP1G2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 50 None 2 4 0 FALSE 0 0 NA C coding 488 1464 1405 2868 PB.9703.6 chr19 - 3148 16 incomplete-splice_match RANBP3 ENST00000340578.10 3233 17 80 5 5prime_fragment FALSE canonical NA NA 56 None 2 10 1 FALSE 0 0 NA C coding 286 858 822 1679 PB.6352.4 chr11 + 3939 4 novel_not_in_catalog MS4A12 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3675 None 3 22 2 TRUE 0 0 NA C coding 119 357 58 414 PB.2402.1 chr3 + 3273 4 full-splice_match ADPRH ENST00000478927.5 1501 4 162 -1934 no_subtype FALSE canonical NA NA 795 None 50 12 1 FALSE 0 0 NA C coding 357 1071 137 1207 PB.5932.1 chr10 - 1457 7 full-splice_match PDLIM1 ENST00000329399.6 1452 7 -11 6 no_subtype FALSE canonical NA NA 216 None 123 3 0 FALSE 0 0 NA A coding 329 987 121 1107 PB.9382.1 chr17 - 3164 14 full-splice_match ACOX1 ENST00000293217.9 7514 14 261 4089 no_subtype FALSE canonical NA NA 138 None 40 16 2 FALSE 0 0 NA C coding 660 1980 30 2009 PB.731.1 chr1 + 1786 14 full-splice_match MSTO2P ENST00000314835.5 1709 14 -23 -54 no_subtype FALSE canonical NA NA 1517 None 2 3 1 FALSE 0 0 NA C coding 309 927 24 950 PB.9382.2 chr17 - 3202 14 full-splice_match ACOX1 ENST00000301608.8 2215 14 3 -990 no_subtype FALSE canonical NA NA 167 None 20 9 0 FALSE 0 0 NA C coding 660 1980 59 2038 PB.3458.1 chr5 + 3078 1 genic_intron novelGene_1134 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3522.1 chr5 - 2914 1 genic_intron novelGene_1189 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1147.1 chr1 - 6729 21 novel_not_in_catalog CEP170 novel NA NA NA NA no_subtype FALSE canonical NA NA 209 None 2 9 0 TRUE 0 0 NA B coding 1486 4458 251 4708 PB.3617.1 chr5 + 6135 2 antisense novelGene_ADAM19_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2642 None 2 36 1 FALSE 0 0 NA A coding 108 324 18 341 PB.2678.1 chr3 - 1362 1 incomplete-splice_match ACAP2 ENST00000326793.10 7160 23 3270 2529 no_subtype FALSE canonical NA NA NA None 6 13 0 FALSE 0 0 NA B coding 117 351 550 900 PB.7201.1 chr12 + 3203 10 full-splice_match TDG ENST00000392872.7 3251 10 42 6 no_subtype FALSE canonical NA NA 1282 None 26 7 0 FALSE 0 0 NA C coding 410 1230 193 1422 PB.7941.9 chr14 + 1540 1 incomplete-splice_match EIF5 ENST00000558506.1 4384 10 2776 69 no_subtype FALSE canonical NA NA NA None 3 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.729.9 chr1 - 2693 12 novel_not_in_catalog YY1AP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 46 None 34 5 1 TRUE 0 0 NA B coding 750 2250 248 2497 PB.6025.2 chr10 + 3750 8 novel_in_catalog SHOC2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1701 None 2 8 0 FALSE 0 0 NA C coding 536 1608 300 1907 PB.9170.1 chr17 + 1815 1 novel_in_catalog GRN novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6025.1 chr10 + 2635 9 full-splice_match SHOC2 ENST00000369452.8 3943 9 71 1237 no_subtype FALSE canonical NA NA 1814 None 61 1 0 FALSE 0 0 NA C coding 582 1746 275 2020 PB.9953.2 chr19 + 3265 5 novel_not_in_catalog ZNF146 novel NA NA NA NA no_subtype FALSE canonical NA NA 171 None 19 14 0 TRUE 0 0 NA C coding 292 876 948 1823 PB.1679.2 chr2 + 3547 1 novel_in_catalog DHRS9 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA B coding 114 342 949 1290 PB.6068.2 chr10 + 3589 7 novel_in_catalog BUB3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 838 None 28 8 0 FALSE 0 0 NA C coding 324 972 85 1056 PB.1679.1 chr2 + 1480 5 incomplete-splice_match DHRS9 ENST00000357546.6 1917 6 427 10 internal_fragment FALSE canonical NA NA 866 None 60 1 0 FALSE 0 0 NA B coding 319 957 131 1087 PB.9251.4 chr17 + 5805 2 novel_in_catalog AKAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4218 None 2 41 0 FALSE 0 0 NA C coding 154 462 127 588 PB.10239.2 chr20 - 2822 2 full-splice_match FASTKD5 ENST00000380266.3 2874 2 44 8 no_subtype FALSE canonical NA NA 88 None 51 2 0 FALSE 0 0 NA A coding 764 2292 279 2570 PB.2821.4 chr4 + 3378 10 novel_not_in_catalog TMEM33 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2885 None 4 18 1 TRUE 0 0 NA B coding 141 423 264 686 PB.2821.2 chr4 + 3505 9 novel_not_in_catalog TMEM33 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2741 None 2 21 1 TRUE 0 0 NA B coding 247 741 315 1055 PB.9523.1 chr18 + 4138 15 full-splice_match DSG2 ENST00000261590.12 5831 15 196 1497 no_subtype FALSE canonical NA NA 2347 None 40 10 0 FALSE 0 0 NA C coding 1118 3354 14 3367 PB.9523.2 chr18 + 1810 1 novel_in_catalog DSG2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2821.1 chr4 + 2679 8 novel_not_in_catalog TMEM33 novel NA NA NA NA no_subtype FALSE canonical NA NA 946 None 15 12 0 TRUE 0 0 NA B coding 247 741 333 1073 PB.8356.1 chr16 + 3060 23 novel_not_in_catalog CHTF18 novel NA NA NA NA no_subtype TRUE canonical NA NA 2836 None 4 6 0 TRUE 0 0 NA A coding 975 2925 46 2970 PB.7563.1 chr13 + 3616 12 novel_not_in_catalog BIVM novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2799 None 4 9 0 TRUE 0 0 NA A coding 503 1509 681 2189 PB.5265.1 chr9 - 1633 9 full-splice_match DCAF12 ENST00000361264.8 3667 9 106 1928 no_subtype FALSE canonical NA NA 314 None 97 1 0 FALSE 0 0 NA A coding 453 1359 237 1595 PB.4259.2 chr6 + 1861 8 full-splice_match TBP ENST00000230354.10 1861 8 -14 14 no_subtype FALSE canonical NA NA 1190 None 15 7 1 FALSE 0 0 NA C coding 339 1017 251 1267 PB.6726.1 chr11 - 2970 14 full-splice_match SRPRA ENST00000332118.10 3069 14 52 47 no_subtype FALSE canonical NA NA 220 None 237 2 0 FALSE 0 0 NA C coding 638 1914 104 2017 PB.729.2 chr1 - 2780 13 novel_not_in_catalog YY1AP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 28 None 2 7 2 TRUE 0 0 NA B coding 332 996 230 1225 PB.6003.1 chr10 + 1754 1 genic_intron novelGene_938 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5592.1 chr9 - 2799 20 full-splice_match DDX31 ENST00000438527.7 2814 20 15 0 no_subtype FALSE canonical NA NA 153 None 10 4 0 FALSE 0 0 NA A coding 746 2238 79 2316 PB.8715.2 chr16 + 4419 24 novel_not_in_catalog WWP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3086 None 25 19 1 TRUE 0 0 NA C coding 870 2610 19 2628 PB.8715.3 chr16 + 3539 5 novel_not_in_catalog WWP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1986 None 2 18 0 TRUE 0 0 NA C coding 181 543 79 621 PB.8715.1 chr16 + 2903 24 full-splice_match WWP2 ENST00000359154.6 4515 24 37 1575 no_subtype FALSE canonical NA NA 2577 None 12 1 0 FALSE 0 0 NA C coding 870 2610 65 2674 PB.3486.6 chr5 + 2653 1 incomplete-splice_match JADE2 ENST00000395003.5 6465 11 3807 6 no_subtype FALSE canonical NA NA NA None 18 5 0 FALSE 0 0 NA C coding 113 339 659 997 PB.8751.1 chr16 + 947 4 full-splice_match GABARAPL2 ENST00000037243.6 1002 4 53 2 no_subtype FALSE canonical NA NA 346 None 12 0 0 FALSE 0 0 NA A coding 117 351 84 434 PB.3455.1 chr5 + 3495 6 novel_not_in_catalog CDC42SE2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1480 None 16 27 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.10697.1 chr22 - 1510 9 full-splice_match GATSL3 ENST00000407689.7 1623 9 99 14 no_subtype FALSE canonical NA NA 144 None 13 5 0 FALSE 0 0 NA A coding 329 987 32 1018 PB.3486.3 chr5 + 6480 12 novel_in_catalog JADE2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1749 None 4 15 0 FALSE 0 0 NA C coding 834 2502 69 2570 PB.946.46 chr1 + 3079 19 novel_in_catalog PTPRC novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1988 None 2 9 0 FALSE 0 0 NA B coding 679 2037 225 2261 PB.1589.10 chr2 + 1704 1 incomplete-splice_match PLEKHB2 ENST00000439822.6 4177 6 2460 14 no_subtype FALSE canonical NA NA NA None 5 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1023.3 chr1 + 2799 1 genic_intron novelGene_1391 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.13.1 chr1 + 3257 20 novel_not_in_catalog MIB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2945 None 3 6 1 FALSE 0 0 NA A coding 955 2865 317 3181 PB.4676.2 chr7 - 1815 1 genic_intron novelGene_1132 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7996.1 chr15 + 3656 23 full-splice_match BUB1B ENST00000287598.10 3725 23 51 18 no_subtype FALSE canonical NA NA 3101 None 7 3 1 FALSE 0 0 NA A coding 1050 3150 145 3294 PB.825.1 chr1 - 1537 5 full-splice_match RGS5 ENST00000313961.9 5862 5 199 4126 no_subtype FALSE canonical NA NA 123 None 41 3 0 FALSE 0 0 NA A coding 181 543 80 622 PB.7262.3 chr12 + 2873 2 novel_not_in_catalog ALDH2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1626 None 4 20 0 TRUE 0 0 NA C coding 108 324 12 335 PB.4658.1 chr7 - 2984 1 genic_intron novelGene_1122 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5084.4 chr8 - 2057 14 incomplete-splice_match TAF2 ENST00000378164.6 5048 26 22 2969 internal_fragment FALSE canonical NA NA 360 None 6 2 0 FALSE 0 0 NA B coding 593 1779 278 2056 PB.4898.1 chr8 + 3740 22 full-splice_match IKBKB ENST00000520810.5 3086 22 68 -722 no_subtype FALSE canonical NA NA 2323 None 52 8 0 FALSE 0 0 NA C coding 756 2268 119 2386 PB.4898.2 chr8 + 3706 21 full-splice_match IKBKB ENST00000416505.5 4036 21 5 325 no_subtype FALSE canonical NA NA 2291 None 4 11 1 FALSE 0 0 NA C coding 697 2091 264 2354 PB.3462.5 chr5 - 2708 22 novel_not_in_catalog ACSL6 novel NA NA NA NA no_subtype FALSE canonical NA NA 286 None 2 2 0 TRUE 0 0 NA B coding 665 1995 409 2403 PB.3462.2 chr5 - 2558 22 novel_not_in_catalog ACSL6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 140 None 4 2 1 TRUE 0 0 NA B coding 671 2013 215 2227 PB.3462.1 chr5 - 2626 23 novel_not_in_catalog ACSL6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 136 None 6 4 1 TRUE 0 0 NA B coding 697 2091 211 2301 PB.9682.1 chr19 + 1398 8 full-splice_match CCDC94 ENST00000262962.11 1434 8 30 6 no_subtype FALSE canonical NA NA 897 None 11 2 0 FALSE 0 0 NA A coding 323 969 39 1007 PB.8709.2 chr16 - 2396 6 full-splice_match COG8 ENST00000306875.8 4247 6 100 1751 no_subtype FALSE canonical NA NA 392 None 10 2 0 FALSE 0 0 NA A coding 612 1836 16 1851 PB.1710.2 chr2 - 4713 9 novel_not_in_catalog WIPF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 203 None 5 17 0 TRUE 0 0 NA C coding 503 1509 242 1750 PB.7959.81 chr14 - 1530 8 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 122 None 4 18 4 TRUE 0 0 NA B coding 254 762 723 1484 PB.1710.4 chr2 - 2725 1 incomplete-splice_match WIPF1 ENST00000392547.6 4587 8 1856 7 no_subtype FALSE canonical NA NA NA None 6 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10882.1 chrX + 1480 2 full-splice_match CA5B ENST00000478923.1 578 2 25 -927 no_subtype FALSE canonical NA NA 39 None 2 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1710.8 chr2 - 2121 8 incomplete-splice_match WIPF1 ENST00000392546.6 2180 9 94 -35 5prime_fragment FALSE canonical NA NA 200 None 65 3 0 FALSE 0 0 NA C coding 503 1509 239 1747 PB.7959.86 chr14 - 1464 7 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 85 None 2 10 3 TRUE 0 0 NA B coding 254 762 657 1418 PB.1540.1 chr2 - 3337 25 full-splice_match BUB1 ENST00000302759.10 3507 25 51 119 no_subtype FALSE canonical NA NA 94 None 21 0 0 FALSE 0 0 NA A coding 1085 3255 69 3323 PB.7405.2 chr13 + 1552 6 full-splice_match RPL21 ENST00000311549.10 815 6 249 -986 no_subtype FALSE canonical NA NA 433 None 10 14 0 FALSE 0 0 NA A coding 160 480 41 520 PB.5566.3 chr9 - 1245 9 full-splice_match C9orf78 ENST00000372447.7 1795 9 13 537 no_subtype FALSE canonical NA NA 124 None 116 0 0 FALSE 0 0 NA A coding 289 867 42 908 PB.3174.1 chr5 - 3846 1 incomplete-splice_match SEMA5A ENST00000382496.9 11762 23 7900 17 no_subtype FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.1 chr14 - 1490 8 fusion IGHA2,IGHV4-4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 13 2 TRUE 0 0 NA B coding 149 447 11 457 PB.10290.1 chr20 + 3013 5 genic_intron novelGene_185 novel NA NA NA NA no_subtype TRUE canonical NA NA 311 None 3 20 3 FALSE 0 0 NA B coding 153 459 2026 2484 PB.7959.3 chr14 - 1490 9 fusion IGHA2,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 81 None 2 14 3 TRUE 0 0 NA B coding 381 1143 302 1444 PB.10290.3 chr20 + 4411 12 full-splice_match RIN2 ENST00000255006.10 4505 12 92 2 no_subtype FALSE canonical NA NA 2568 None 3 14 0 FALSE 0 0 NA C coding 944 2832 58 2889 PB.10290.4 chr20 + 2690 5 novel_not_in_catalog RIN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2509 None 4 11 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.16.13 chr1 - 3506 13 novel_not_in_catalog NADK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 109 None 2 25 0 TRUE 0 0 NA B coding 384 1152 171 1322 PB.16.10 chr1 - 2933 12 novel_not_in_catalog NADK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 120 None 8 24 0 TRUE 0 0 NA B coding 360 1080 203 1282 PB.10151.1 chr19 + 3618 2 antisense novelGene_ZNF836_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 848 None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.9 chr14 - 1499 7 fusion IGHA2,IGHV4-4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 92 11 1 TRUE 0 0 NA B coding 127 381 11 391 PB.8324.1 chr15 + 2702 2 genic HSP90B2P novel NA NA NA NA no_subtype FALSE non_canonical NA NA 56 None 2 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2982.1 chr4 + 3612 24 novel_not_in_catalog NFKB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2746 None 2 10 1 TRUE 0 0 NA B coding 956 2868 37 2904 PB.6470.1 chr11 - 3956 22 novel_not_in_catalog PC novel NA NA NA NA no_subtype TRUE canonical NA NA 43 None 2 1 0 TRUE 0 0 NA B coding 1178 3534 44 3577 PB.275.1 chr1 - 1808 17 full-splice_match SF3A3 ENST00000373019.4 3673 17 878 987 no_subtype FALSE canonical NA NA 174 None 36 0 0 FALSE 0 0 NA A coding 501 1503 79 1581 PB.6694.2 chr11 + 6077 2 genic_intron novelGene_1051 novel NA NA NA NA no_subtype FALSE canonical NA NA 98 None 4 29 0 FALSE 0 0 NA A coding 128 384 3522 3905 PB.2187.3 chr3 - 2634 24 novel_not_in_catalog QARS novel NA NA NA NA no_subtype FALSE canonical NA NA 142 None 2 1 0 FALSE 0 0 NA B coding 654 1962 26 1987 PB.2187.1 chr3 - 2444 25 novel_not_in_catalog QARS novel NA NA NA NA no_subtype FALSE canonical NA NA 141 None 14 1 0 FALSE 0 0 NA B coding 775 2325 25 2349 PB.3580.2 chr5 - 2925 3 novel_in_catalog RPS14 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 55 None 2 26 0 FALSE 0 0 NA C coding 127 381 58 438 PB.4326.1 chr7 + 1591 7 full-splice_match NUPL2 ENST00000258742.9 1795 7 201 3 no_subtype TRUE canonical NA NA 752 None 5 4 0 FALSE 0 0 NA A coding 423 1269 59 1327 PB.7959.11 chr14 - 2693 11 fusion IGHG1,IGHG2,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 24 None 4 24 4 TRUE 0 0 NA A coding 159 477 812 1288 PB.2465.3 chr3 + 1592 7 novel_in_catalog HMCES novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 899 None 5 5 0 FALSE 0 0 NA C coding 354 1062 72 1133 PB.7959.13 chr14 - 2540 5 novel_not_in_catalog IGHG2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 292 None 3 15 1 TRUE 0 0 NA A coding 265 795 349 1143 PB.7945.1 chr14 - 1621 2 full-splice_match BAG5 ENST00000557666.1 878 2 158 -901 no_subtype FALSE canonical NA NA 58 None 6 0 0 FALSE 0 0 NA A coding 447 1341 87 1427 PB.7959.15 chr14 - 1517 13 fusion IGHV1-24,IGHG1,IGHG2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 103 None 2 16 5 TRUE 0 0 NA A coding 196 588 796 1383 PB.7959.17 chr14 - 1463 7 fusion IGHV5-51,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 97 None 2 13 4 TRUE 0 0 NA B coding 453 1359 52 1410 PB.8272.13 chr15 + 1839 2 novel_not_in_catalog AKAP13 novel NA NA NA NA no_subtype FALSE canonical NA NA 920 None 3 11 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.7959.19 chr14 - 1528 8 fusion IGHV7-34-1,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 100 None 17 13 3 TRUE 0 0 NA A coding 254 762 714 1475 PB.2006.2 chr3 + 3089 3 genic MKRN2 novel NA NA NA NA no_subtype TRUE canonical NA NA 463 None 2 14 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.2006.1 chr3 + 2726 8 full-splice_match MKRN2 ENST00000170447.11 2848 8 110 12 no_subtype FALSE canonical NA NA 1140 None 79 17 0 FALSE 0 0 NA C coding 416 1248 28 1275 PB.10425.1 chr20 - 1840 2 full-splice_match TP53RK ENST00000372114.3 3515 2 273 1402 no_subtype FALSE canonical NA NA 375 None 9 10 0 FALSE 0 0 NA A coding 253 759 93 851 PB.7324.1 chr12 + 2792 3 novel_in_catalog P2RX7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 376 None 2 5 0 FALSE 0 0 NA A coding 159 477 83 559 PB.8030.1 chr15 - 2835 7 novel_not_in_catalog LRRC57 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 92 None 4 15 0 TRUE 0 0 NA A coding 239 717 115 831 PB.2940.4 chr4 - 2893 3 genic_intron novelGene_792 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2273 None 2 23 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.2940.1 chr4 - 1570 7 novel_not_in_catalog HSD17B11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 309 None 2 4 2 TRUE 0 0 NA C coding 142 426 481 906 PB.2940.2 chr4 - 1674 7 full-splice_match HSD17B11 ENST00000358290.8 1885 7 204 7 no_subtype FALSE canonical NA NA 322 None 126 3 0 FALSE 0 0 NA C coding 300 900 113 1012 PB.2940.3 chr4 - 1531 7 novel_not_in_catalog HSD17B11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 307 None 2 4 1 TRUE 0 0 NA C coding 196 588 98 685 PB.6282.2 chr11 + 3675 14 novel_not_in_catalog API5 novel NA NA NA NA no_subtype FALSE canonical NA NA 1576 None 105 8 1 FALSE 0 0 NA A coding 505 1515 85 1599 PB.9148.1 chr17 - 1313 12 full-splice_match AARSD1 ENST00000427569.6 1322 12 25 -16 no_subtype FALSE canonical NA NA 50 None 3 1 0 FALSE 0 0 NA A coding 412 1236 12 1247 PB.4087.1 chr6 - 3228 2 antisense novelGene_RP5-1112D6.4_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1809 None 5 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10058.2 chr19 - 3105 13 full-splice_match PPP1R13L ENST00000418234.6 3118 13 6 7 no_subtype FALSE canonical NA NA 52 None 2 6 0 FALSE 0 0 NA C coding 828 2484 74 2557 PB.10058.3 chr19 - 3206 14 novel_in_catalog PPP1R13L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 70 None 2 7 0 FALSE 0 0 NA C coding 828 2484 175 2658 PB.5542.2 chr9 + 1664 4 full-splice_match URM1 ENST00000452446.2 2944 4 -6 1286 no_subtype FALSE canonical NA NA 194 None 10 6 0 FALSE 0 0 NA C coding 146 438 7 444 PB.5542.1 chr9 + 1320 5 full-splice_match URM1 ENST00000372853.8 2650 5 44 1286 no_subtype FALSE canonical NA NA 255 None 23 5 0 FALSE 0 0 NA C coding 101 303 19 321 PB.10439.1 chr20 - 1756 6 full-splice_match TMEM189 ENST00000371652.8 7714 6 29 5929 no_subtype FALSE canonical NA NA 189 None 6 6 0 FALSE 0 0 NA A coding 270 810 69 878 PB.10927.1 chrX + 1698 3 full-splice_match GPR34 ENST00000378142.8 1928 3 55 175 no_subtype FALSE canonical NA NA 150 None 3 2 0 FALSE 0 0 NA A coding 374 1122 251 1372 PB.9942.2 chr19 + 2012 5 novel_in_catalog ZBTB32 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1457 None 3 3 0 FALSE 0 0 NA B coding 354 1062 144 1205 PB.9942.1 chr19 + 1880 6 novel_in_catalog ZBTB32 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 1322 None 14 3 0 FALSE 0 0 NA B coding 487 1461 134 1594 PB.845.6 chr1 - 1924 1 antisense novelGene_MPZL1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1230.2 chr2 - 3107 3 full-splice_match OST4 ENST00000456793.1 561 3 105 -2651 no_subtype FALSE canonical NA NA 68 None 6 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9097.2 chr17 + 2024 15 novel_not_in_catalog GRB7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1497 None 4 2 1 FALSE 0 0 NA B coding 532 1596 46 1641 PB.7493.1 chr13 + 1543 2 full-splice_match ARL11 ENST00000282026.1 3760 2 180 2037 no_subtype FALSE canonical NA NA 137 None 18 4 0 FALSE 0 0 NA A coding 196 588 156 743 PB.9474.1 chr18 - 2838 3 full-splice_match ZBTB14 ENST00000400143.7 1814 3 149 -1173 no_subtype FALSE canonical NA NA 234 None 12 17 0 FALSE 0 0 NA A coding 443 1329 334 1662 PB.1474.1 chr2 - 928 6 novel_not_in_catalog IGKV1-27 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 70 None 6 16 2 TRUE 0 0 NA B coding 103 309 16 324 PB.2976.1 chr4 + 1435 1 antisense novelGene_PPP3CA_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.845.4 chr1 - 1712 1 genic_intron novelGene_1293 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11020.1 chrX + 3978 9 novel_not_in_catalog NLGN3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2034 None 2 18 2 TRUE 0 0 NA A coding 646 1938 938 2875 PB.3910.1 chr6 - 6414 1 genic_intron novelGene_416 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 43 0 FALSE 0 0 NA A coding 227 681 5421 6101 PB.5797.1 chr10 + 2985 1 genic_intron novelGene_595 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3289.1 chr5 + 3152 20 full-splice_match KIF2A ENST00000401507.7 2539 20 89 -702 no_subtype FALSE canonical NA NA 2257 None 2 4 0 FALSE 0 0 NA C coding 706 2118 223 2340 PB.4226.1 chr6 - 715 5 full-splice_match DYNLT1 ENST00000367089.7 726 5 7 4 no_subtype FALSE canonical NA NA 51 None 2 1 0 FALSE 0 0 NA C coding 113 339 25 363 PB.1664.1 chr2 + 1979 7 incomplete-splice_match TANK ENST00000259075.6 2152 8 156 17 internal_fragment FALSE canonical NA NA 1150 None 33 9 0 FALSE 0 0 NA C coding 425 1275 50 1324 PB.7786.1 chr14 - 2812 1 antisense novelGene_SLC39A9_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.839.2 chr1 - 1598 8 novel_not_in_catalog CD247 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 117 None 4 5 0 FALSE 0 0 NA B coding 166 498 60 557 PB.7378.1 chr12 + 4377 5 full-splice_match ZNF10 ENST00000248211.10 4441 5 43 21 no_subtype FALSE canonical NA NA 435 None 6 16 0 FALSE 0 0 NA A coding 573 1719 180 1898 PB.8481.1 chr16 + 2047 14 full-splice_match ACSM3 ENST00000289416.9 2845 14 361 437 no_subtype FALSE canonical NA NA 1788 None 3 4 0 FALSE 0 0 NA A coding 578 1734 139 1872 PB.1870.1 chr2 - 3873 17 novel_not_in_catalog ATG9A novel NA NA NA NA no_subtype FALSE canonical NA NA 54 None 3 6 1 FALSE 0 0 NA C coding 839 2517 290 2806 PB.77.1 chr1 + 3701 18 incomplete-splice_match PLEKHM2 ENST00000375793.2 4004 19 300 3 internal_fragment FALSE canonical NA NA 2731 None 2 4 0 FALSE 0 0 NA A coding 834 2502 365 2866 PB.8244.2 chr15 - 1418 12 full-splice_match CTSH ENST00000220166.9 2190 12 54 718 no_subtype FALSE canonical NA NA 147 None 141 0 0 FALSE 0 0 NA C coding 335 1005 57 1061 PB.6683.1 chr11 + 927 6 novel_not_in_catalog TRAPPC4 novel NA NA NA NA no_subtype FALSE canonical NA NA 731 None 4 3 1 TRUE 0 0 NA A coding 219 657 16 672 PB.3068.2 chr4 + 1693 1 full-splice_match RTN3P1 ENST00000536295.1 711 1 -132 -850 no_subtype FALSE canonical NA NA NA None 39 8 0 FALSE 0 0 NA C coding 236 708 133 840 PB.8477.1 chr16 + 5249 15 novel_not_in_catalog CCP110 novel NA NA NA NA no_subtype FALSE canonical NA NA 3050 None 2 23 0 TRUE 0 0 NA A coding 991 2973 148 3120 PB.7262.1 chr12 + 1825 13 full-splice_match ALDH2 ENST00000261733.6 9569 13 55 7689 no_subtype FALSE canonical NA NA 1527 None 84 1 0 FALSE 0 0 NA C coding 517 1551 7 1557 PB.1928.1 chr2 - 3519 29 novel_not_in_catalog USP40 novel NA NA NA NA no_subtype FALSE canonical NA NA 92 None 22 0 0 FALSE 0 0 NA A coding 1136 3408 112 3519 PB.5279.1 chr9 + 6404 41 novel_not_in_catalog UNC13B novel NA NA NA NA no_subtype TRUE canonical NA NA 4815 None 5 9 1 TRUE 0 0 NA A coding 1591 4773 326 5098 PB.5259.8 chr9 + 2830 21 novel_not_in_catalog NFX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2754 None 3 1 0 TRUE 0 0 NA B coding 935 2805 26 2830 PB.5259.9 chr9 + 3562 25 novel_not_in_catalog NFX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2997 None 2 4 0 TRUE 0 0 NA B coding 1024 3072 26 3097 PB.10968.1 chrX - 1651 11 full-splice_match GPKOW ENST00000156109.6 1742 11 74 17 no_subtype FALSE canonical NA NA 181 None 6 1 0 FALSE 0 0 NA A coding 476 1428 6 1433 PB.3288.1 chr5 + 2892 20 novel_in_catalog KIF2A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2006 None 5 3 0 FALSE 0 0 NA C coding 687 2061 29 2089 PB.3288.2 chr5 + 2943 20 full-splice_match KIF2A ENST00000401507.7 2539 20 301 -705 no_subtype FALSE canonical NA NA 2045 None 11 10 1 FALSE 0 0 NA C coding 706 2118 11 2128 PB.657.1 chr1 + 3053 2 antisense novelGene_MCL1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 390 None 42 24 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10431.1 chr20 - 2597 1 novel_in_catalog SULF2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 32 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5259.1 chr9 + 1365 8 full-splice_match CHMP5 ENST00000223500.8 1477 8 84 28 no_subtype FALSE canonical NA NA 662 None 14 1 0 FALSE 0 0 NA A coding 219 657 54 710 PB.6017.3 chr10 + 4088 15 novel_not_in_catalog ADD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1857 None 5 6 0 TRUE 0 0 NA B coding 674 2022 126 2147 PB.5259.3 chr9 + 1377 1 novel_in_catalog NFX1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5259.4 chr9 + 3591 28 novel_not_in_catalog NFX1 novel NA NA NA NA no_subtype TRUE canonical NA NA 3324 None 15 2 0 TRUE 0 0 NA B coding 1120 3360 35 3394 PB.5259.5 chr9 + 3154 19 novel_not_in_catalog NFX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2470 None 25 4 0 TRUE 0 0 NA B coding 832 2496 47 2542 PB.2849.1 chr4 + 3365 19 full-splice_match EXOC1 ENST00000346134.11 3357 19 -18 10 no_subtype FALSE canonical NA NA 2683 None 10 5 1 FALSE 0 0 NA C coding 894 2682 152 2833 PB.208.12 chr1 + 1879 3 antisense novelGene_TMEM200B_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 145 None 2 11 0 FALSE 0 0 NA B coding 135 405 758 1162 PB.208.13 chr1 + 1120 1 incomplete-splice_match EPB41 ENST00000460378.1 5212 5 4087 6 no_subtype FALSE canonical NA NA NA None 9 9 0 FALSE 0 0 NA B coding 118 354 44 397 PB.208.10 chr1 + 5707 18 incomplete-splice_match EPB41 ENST00000356093.6 5857 19 134 16 internal_fragment FALSE canonical NA NA 2495 None 2 27 0 FALSE 0 0 NA B coding 622 1866 621 2486 PB.208.11 chr1 + 1920 3 antisense novelGene_TMEM200B_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 172 None 9 12 1 FALSE 0 0 NA B coding 135 405 788 1192 PB.4304.1 chr7 - 2235 3 full-splice_match MEOX2 ENST00000262041.5 2500 3 258 7 no_subtype FALSE canonical NA NA 669 None 3 7 0 FALSE 0 0 NA A coding 246 738 327 1064 PB.11154.2 chrX - 3124 2 novel_in_catalog ENOX2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 153 None 2 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6661.3 chr11 + 5649 5 novel_in_catalog IL10RA novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 2890 None 2 25 0 FALSE 0 0 NA C coding 369 1107 2708 3814 PB.2062.1 chr3 - 2108 8 full-splice_match AZI2 ENST00000479665.5 4706 8 99 2499 no_subtype FALSE canonical NA NA 428 None 18 8 0 FALSE 0 0 NA A coding 392 1176 434 1609 PB.10887.1 chrX + 2922 9 novel_not_in_catalog SCML1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1202 None 5 15 0 TRUE 0 0 NA B coding 329 987 348 1334 PB.1706.1 chr2 - 1684 11 full-splice_match OLA1 ENST00000284719.7 4417 11 166 2567 no_subtype FALSE canonical NA NA 81 None 30 2 0 FALSE 0 0 NA A coding 396 1188 82 1269 PB.9974.1 chr19 - 1185 10 full-splice_match ECH1 ENST00000221418.8 1411 10 215 11 no_subtype FALSE canonical NA NA 70 None 16 2 0 FALSE 0 0 NA C coding 328 984 19 1002 PB.9974.2 chr19 - 1612 8 full-splice_match ECH1 ENST00000598707.5 882 8 -22 -708 no_subtype FALSE canonical NA NA 77 None 2 6 0 FALSE 0 0 NA C coding 244 732 26 757 PB.4983.1 chr8 - 2958 5 genic_intron novelGene_707 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 535 None 5 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3289.3 chr5 + 3095 20 novel_in_catalog KIF2A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2199 None 4 4 0 FALSE 0 0 NA C coding 687 2061 222 2282 PB.266.18 chr1 - 3229 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 88 None 22 21 2 TRUE 0 0 NA C coding 836 2508 461 2968 PB.1594.1 chr2 + 2049 1 genic_intron novelGene_1149 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.266.17 chr1 - 3347 19 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 3 6 1 TRUE 0 0 NA C coding 836 2508 526 3033 PB.266.14 chr1 - 2944 17 full-splice_match CSF3R ENST00000373106.5 3373 17 373 56 no_subtype FALSE canonical NA NA 95 None 111 3 1 FALSE 0 0 NA C coding 836 2508 176 2683 PB.5537.2 chr9 - 2956 18 novel_not_in_catalog CIZ1 novel NA NA NA NA no_subtype FALSE canonical NA NA 141 None 7 5 0 TRUE 0 0 NA B coding 894 2682 147 2828 PB.266.13 chr1 - 3168 17 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 112 None 50 4 1 FALSE 0 0 NA C coding 836 2508 399 2906 PB.266.10 chr1 - 3012 18 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 37 None 2 3 1 FALSE 0 0 NA C coding 704 2112 587 2698 PB.677.2 chr1 + 919 7 full-splice_match PSMB4 ENST00000290541.6 964 7 31 14 no_subtype FALSE canonical NA NA 805 None 4 3 0 FALSE 0 0 NA A coding 264 792 24 815 PB.10325.4 chr20 - 3082 9 novel_not_in_catalog COMMD7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 299 None 2 26 4 TRUE 0 0 NA C coding 106 318 1648 1965 PB.3719.1 chr6 - 1323 10 novel_not_in_catalog ECI2 novel NA NA NA NA no_subtype FALSE canonical NA NA 47 None 2 4 1 TRUE 0 0 NA B coding 155 465 78 542 PB.1738.1 chr2 - 3732 9 novel_not_in_catalog TFPI novel NA NA NA NA no_subtype FALSE non_canonical NA NA 278 None 37 14 1 TRUE 0 0 NA C coding 300 900 293 1192 PB.10325.1 chr20 - 1362 10 novel_not_in_catalog COMMD7 novel NA NA NA NA no_subtype TRUE canonical NA NA 167 None 16 7 0 FALSE 0 0 NA C coding 200 600 84 683 PB.6547.1 chr11 + 4041 2 full-splice_match B3GNT6 ENST00000622824.1 2503 2 28 -1566 no_subtype FALSE canonical NA NA 53 None 35 22 0 FALSE 0 0 NA A coding 384 1152 54 1205 PB.10325.3 chr20 - 1357 9 full-splice_match COMMD7 ENST00000278980.10 1900 9 528 15 no_subtype FALSE canonical NA NA 162 None 2 5 0 FALSE 0 0 NA C coding 200 600 79 678 PB.10325.2 chr20 - 1882 8 novel_in_catalog COMMD7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 123 None 2 13 1 FALSE 0 0 NA C coding 242 726 40 765 PB.4382.1 chr7 - 2904 29 full-splice_match VPS41 ENST00000310301.8 5903 29 41 2958 no_subtype FALSE canonical NA NA 35 None 2 3 1 FALSE 0 0 NA C coding 854 2562 15 2576 PB.3280.1 chr5 + 1856 1 genic_intron novelGene_582 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9953.1 chr19 + 3343 4 full-splice_match ZNF146 ENST00000443387.2 3326 4 -27 10 no_subtype FALSE canonical NA NA 237 None 7 13 2 FALSE 0 0 NA C coding 292 876 1020 1895 PB.2018.4 chr3 - 3848 18 novel_not_in_catalog XPC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 185 None 4 14 2 TRUE 0 0 NA B coding 375 1125 1939 3063 PB.2018.5 chr3 - 3617 18 novel_not_in_catalog XPC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 121 None 2 13 3 TRUE 0 0 NA B coding 938 2814 19 2832 PB.2018.2 chr3 - 3477 17 novel_not_in_catalog XPC novel NA NA NA NA no_subtype FALSE canonical NA NA 136 None 204 7 1 TRUE 0 0 NA B coding 940 2820 34 2853 PB.2018.3 chr3 - 3664 18 novel_not_in_catalog XPC novel NA NA NA NA no_subtype FALSE canonical NA NA 157 None 3 6 1 TRUE 0 0 NA B coding 939 2817 55 2871 PB.10573.1 chr21 + 2655 17 novel_not_in_catalog MX1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1977 None 666 8 1 TRUE 0 0 NA B coding 662 1986 217 2202 PB.7538.1 chr13 - 3146 2 full-splice_match SLITRK6 ENST00000400286.2 4318 2 102 1070 no_subtype TRUE canonical NA NA 473 None 11 1 0 FALSE 0 0 NA A coding 841 2523 498 3020 PB.5162.1 chr8 + 1736 7 full-splice_match GRINA ENST00000395068.8 1814 7 76 2 no_subtype FALSE canonical NA NA 1014 None 6 4 0 FALSE 0 0 NA A coding 371 1113 49 1161 PB.2849.3 chr4 + 3453 18 novel_in_catalog EXOC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2769 None 12 8 0 FALSE 0 0 NA C coding 879 2637 283 2919 PB.3779.1 chr6 + 3292 11 full-splice_match MRS2 ENST00000378386.7 3313 11 19 2 no_subtype FALSE canonical NA NA 1295 None 8 10 0 FALSE 0 0 NA C coding 443 1329 75 1403 PB.6868.1 chr12 - 3523 1 incomplete-splice_match BCAT1 ENST00000261192.11 9674 11 4809 1343 no_subtype FALSE canonical NA NA NA None 6 21 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8413.1 chr16 - 1188 6 full-splice_match NMRAL1 ENST00000574425.5 1240 6 50 2 no_subtype FALSE canonical NA NA 171 None 2 6 1 FALSE 0 0 NA A coding 299 897 206 1102 PB.3779.2 chr6 + 3399 11 novel_not_in_catalog MRS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1402 None 2 15 1 FALSE 0 0 NA C coding 215 645 75 719 PB.7544.1 chr13 + 3499 13 novel_not_in_catalog DNAJC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1457 None 43 24 0 TRUE 0 0 NA B coding 504 1512 101 1612 PB.950.1 chr1 + 4117 10 full-splice_match C1orf106 ENST00000367342.8 4298 10 172 9 no_subtype FALSE canonical NA NA 1927 None 2 24 1 FALSE 0 0 NA C coding 663 1989 29 2017 PB.1451.2 chr2 - 2726 4 full-splice_match C2orf68 ENST00000306336.5 2837 4 -40 151 no_subtype FALSE canonical NA NA 192 None 10 16 0 FALSE 0 0 NA C coding 166 498 86 583 PB.950.3 chr1 + 4028 10 novel_in_catalog C1orf106 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1838 None 3 14 0 FALSE 0 0 NA C coding 578 1734 195 1928 PB.7240.2 chr12 + 3058 14 novel_not_in_catalog TCHP novel NA NA NA NA no_subtype TRUE canonical NA NA 1585 None 6 14 0 TRUE 0 0 NA C coding 498 1494 122 1615 PB.4234.1 chr6 + 1700 6 novel_in_catalog WTAP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 476 None 8 3 0 FALSE 0 0 NA C coding 151 453 204 656 PB.4231.10 chr6 - 5204 1 novel_in_catalog TAGAP novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 34 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10952.1 chrX + 1751 10 full-splice_match WDR13 ENST00000376729.9 5469 10 45 3673 no_subtype FALSE canonical NA NA 1404 None 6 2 0 FALSE 0 0 NA C coding 485 1455 132 1586 PB.4753.1 chr7 - 1786 10 full-splice_match FASTK ENST00000297532.10 1827 10 35 6 no_subtype FALSE canonical NA NA 125 None 21 2 1 FALSE 0 0 NA C coding 515 1545 146 1690 PB.4753.2 chr7 - 1826 10 novel_not_in_catalog FASTK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 117 None 2 6 1 TRUE 0 0 NA C coding 479 1437 138 1574 PB.10952.2 chrX + 1801 9 full-splice_match WDR13 ENST00000218056.9 2124 9 310 13 no_subtype FALSE canonical NA NA 1468 None 5 1 0 FALSE 0 0 NA C coding 485 1455 196 1650 PB.1796.2 chr2 - 3681 11 novel_in_catalog FAM126B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 100 None 3 15 0 FALSE 0 0 NA A coding 530 1590 131 1720 PB.10339.1 chr20 + 3158 3 genic_intron novelGene_336 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1957 None 2 19 1 FALSE 0 0 NA A coding 104 312 886 1197 PB.6202.1 chr11 - 1905 6 full-splice_match LYVE1 ENST00000256178.7 3273 6 8 1360 no_subtype FALSE canonical NA NA 236 None 18 8 0 FALSE 0 0 NA A coding 322 966 152 1117 PB.6727.8 chr11 + 1779 11 full-splice_match ST3GAL4 ENST00000444328.6 1812 11 24 9 no_subtype FALSE canonical NA NA 1110 None 39 0 0 FALSE 0 0 NA C coding 333 999 196 1194 PB.845.3 chr1 + 1505 5 novel_not_in_catalog MPZL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 848 None 3 9 0 FALSE 0 0 NA C coding 200 600 167 766 PB.845.2 chr1 + 3773 5 full-splice_match MPZL1 ENST00000474859.5 630 5 -169 -2974 no_subtype FALSE canonical NA NA 774 None 8 20 0 FALSE 0 0 NA C coding 209 627 170 796 PB.845.1 chr1 + 3889 6 full-splice_match MPZL1 ENST00000359523.6 5010 6 22 1099 no_subtype FALSE canonical NA NA 888 None 7 26 0 FALSE 0 0 NA C coding 269 807 181 987 PB.2894.2 chr4 + 2501 9 novel_not_in_catalog CCNG2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1837 None 17 10 1 TRUE 0 0 NA B coding 344 1032 261 1292 PB.2894.3 chr4 + 2885 6 novel_in_catalog CCNG2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 868 None 3 15 0 FALSE 0 0 NA B coding 242 726 263 988 PB.249.2 chr1 - 3248 4 full-splice_match SFPQ ENST00000490668.5 434 4 -2822 8 no_subtype FALSE canonical NA NA 3032 None 6 18 0 FALSE 0 0 NA C coding 109 327 713 1039 PB.249.5 chr1 - 1438 6 incomplete-splice_match SFPQ ENST00000357214.5 3747 10 1629 680 5prime_fragment FALSE canonical NA NA 82 None 2 8 0 FALSE 0 0 NA C coding 196 588 4 591 PB.249.4 chr1 - 2796 1 novel_in_catalog SFPQ novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 16 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2894.4 chr4 + 3470 4 novel_in_catalog CCNG2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 537 None 2 39 0 FALSE 0 0 NA B coding 186 558 262 819 PB.2894.5 chr4 + 1703 2 novel_not_in_catalog CCNG2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1046 None 2 11 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.3813.2 chr6 - 3675 25 novel_in_catalog BAG6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 231 None 19 2 0 FALSE 0 0 NA C coding 1113 3339 245 3583 PB.3813.3 chr6 - 3781 25 novel_in_catalog BAG6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 277 None 18 3 0 FALSE 0 0 NA C coding 1126 3378 291 3668 PB.3813.1 chr6 - 3496 24 novel_in_catalog BAG6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 136 None 5 3 0 FALSE 0 0 NA C coding 1077 3231 150 3380 PB.5690.1 chr10 + 1476 3 novel_not_in_catalog RPP38 novel NA NA NA NA no_subtype FALSE canonical NA NA 533 None 4 10 1 FALSE 0 0 NA A coding 283 849 544 1392 PB.3813.7 chr6 - 3710 25 full-splice_match BAG6 ENST00000211379.9 3779 25 45 24 no_subtype FALSE canonical NA NA 237 None 56 4 1 FALSE 0 0 NA C coding 1126 3378 251 3628 PB.3813.4 chr6 - 3566 24 novel_not_in_catalog BAG6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 232 None 3 5 1 TRUE 0 0 NA C coding 1072 3216 246 3461 PB.7871.7 chr14 + 3382 3 genic_intron novelGene_848 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 145 None 2 18 1 FALSE 0 0 NA B coding 126 378 1416 1793 PB.1250.1 chr2 + 2129 3 full-splice_match YPEL5 ENST00000261353.8 2182 3 48 5 no_subtype FALSE canonical NA NA 219 None 20 10 0 FALSE 0 0 NA C coding 121 363 79 441 PB.3813.8 chr6 - 3717 25 novel_in_catalog BAG6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 261 None 16 2 0 FALSE 0 0 NA C coding 1113 3339 275 3613 PB.1250.2 chr2 + 2907 3 novel_in_catalog YPEL5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 997 None 3 14 0 FALSE 0 0 NA C coding 121 363 857 1219 PB.3289.4 chr5 - 1549 12 full-splice_match DIMT1 ENST00000199320.8 2859 12 31 1279 no_subtype TRUE canonical NA NA 209 None 17 2 0 FALSE 0 0 NA A coding 313 939 131 1069 PB.6727.3 chr11 + 1919 13 novel_not_in_catalog FOXRED1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1229 None 3 4 0 TRUE 0 0 NA C coding 299 897 585 1481 PB.1427.1 chr2 - 4152 28 full-splice_match DCTN1 ENST00000409240.5 4365 28 210 3 no_subtype FALSE canonical NA NA 84 None 4 1 0 FALSE 0 0 NA C coding 1236 3708 103 3810 PB.3970.1 chr6 + 3072 16 novel_not_in_catalog LRRC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1585 None 16 8 0 TRUE 0 0 NA A coding 524 1572 170 1741 PB.7641.1 chr14 + 3417 1 incomplete-splice_match KHNYN ENST00000251343.9 6725 8 2811 498 no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A coding 148 444 2269 2712 PB.5468.3 chr9 - 5981 1 genic_intron novelGene_1023 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.667.1 chr1 - 2242 11 full-splice_match CERS2 ENST00000368954.9 2505 11 245 18 no_subtype FALSE canonical NA NA 141 None 4 7 0 FALSE 0 0 NA C coding 380 1140 143 1282 PB.681.3 chr1 - 2727 2 antisense novelGene_SNX27_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2427 None 8 15 1 FALSE 0 0 NA B coding 114 342 1250 1591 PB.3705.2 chr5 - 960 8 full-splice_match RACK1 ENST00000512805.5 1403 8 432 11 no_subtype FALSE canonical NA NA 86 None 85 1 0 FALSE 0 0 NA A coding 288 864 65 928 PB.5680.1 chr10 - 993 10 full-splice_match NUDT5 ENST00000491614.5 3433 10 209 2231 no_subtype TRUE canonical NA NA 146 None 4 0 0 FALSE 0 0 NA A coding 219 657 188 844 PB.2427.13 chr3 + 2051 1 incomplete-splice_match PARP14 ENST00000474629.6 7915 17 5681 184 no_subtype FALSE canonical NA NA NA None 3 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5468.1 chr9 - 2869 1 genic_intron novelGene_1021 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9262.1 chr17 - 706 5 full-splice_match SUPT4H1 ENST00000225504.7 1489 5 36 747 no_subtype FALSE canonical NA NA 100 None 10 4 0 FALSE 0 0 NA A coding 117 351 32 382 PB.1401.1 chr2 - 2793 11 novel_not_in_catalog C2orf42 novel NA NA NA NA no_subtype FALSE canonical NA NA 86 None 2 7 0 TRUE 0 0 NA B coding 574 1722 368 2089 PB.3793.1 chr6 + 1631 2 full-splice_match HIST1H2AC ENST00000377791.3 1654 2 28 -5 no_subtype FALSE canonical NA NA 577 None 37 17 1 FALSE 0 0 NA A coding 130 390 61 450 PB.2395.1 chr3 - 2999 1 genic_intron novelGene_1030 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10982.1 chrX + 2968 1 genic KANTR novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A coding 102 306 1082 1387 PB.3765.2 chr6 - 4380 2 genic_intron novelGene_152 novel NA NA NA NA no_subtype FALSE canonical NA NA 1664 None 5 19 1 FALSE 0 0 NA B coding 111 333 335 667 PB.1199.2 chr2 + 3248 1 genic_intron novelGene_145 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1199.1 chr2 - 3972 12 full-splice_match FAM49A ENST00000381323.7 4670 12 11 687 no_subtype FALSE canonical NA NA 44 None 2 17 0 FALSE 0 0 NA C coding 323 969 211 1179 PB.7028.1 chr12 + 1227 12 incomplete-splice_match PA2G4 ENST00000303305.10 2577 13 281 1069 3prime_fragment FALSE canonical NA NA 1203 None 12 0 0 FALSE 0 0 NA C coding 363 1089 139 1227 PB.9501.1 chr18 - 1396 11 incomplete-splice_match ROCK1 ENST00000635540.1 5656 34 1794 2466 internal_fragment FALSE canonical NA NA 201 None 2 0 0 FALSE 0 0 NA B coding 456 1368 27 1394 PB.1900.1 chr2 + 3707 1 novel_in_catalog CCL20 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10855.1 chrX - 2083 4 full-splice_match PUDP ENST00000381077.9 2140 4 54 3 no_subtype FALSE canonical NA NA 84 None 3 11 0 FALSE 0 0 NA A coding 228 684 24 707 PB.7871.5 chr14 + 2494 6 novel_not_in_catalog RIN3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1441 None 56 6 0 TRUE 0 0 NA B coding 582 1746 20 1765 PB.3390.2 chr5 + 3333 20 novel_not_in_catalog ERAP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3119 None 50 4 1 TRUE 0 0 NA C coding 954 2862 169 3030 PB.4410.11 chr7 + 1868 1 genic_intron novelGene_446 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.409.1 chr1 + 2332 11 full-splice_match PGM1 ENST00000371084.7 2472 11 135 5 no_subtype FALSE canonical NA NA 1677 None 3 7 0 FALSE 0 0 NA C coding 562 1686 79 1764 PB.8754.4 chr16 + 5663 9 novel_not_in_catalog MON1B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5063 None 2 37 3 TRUE 0 0 NA C coding 547 1641 68 1708 PB.8206.3 chr15 + 2645 14 novel_not_in_catalog CSK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1780 None 7 3 1 TRUE 0 0 NA C coding 450 1350 611 1960 PB.8206.2 chr15 + 1969 13 full-splice_match CSK ENST00000220003.13 2767 13 495 303 no_subtype FALSE canonical NA NA 1404 None 25 1 0 FALSE 0 0 NA C coding 450 1350 235 1584 PB.8754.1 chr16 + 2884 5 incomplete-splice_match MON1B ENST00000248248.7 6091 6 445 2762 internal_fragment FALSE canonical NA NA 1348 None 20 11 0 FALSE 0 0 NA C coding 412 1236 311 1546 PB.7128.8 chr12 - 1414 13 full-splice_match NAP1L1 ENST00000549596.5 1838 13 2 422 no_subtype FALSE canonical NA NA 117 None 3 1 0 FALSE 0 0 NA C coding 368 1104 138 1241 PB.3277.1 chr5 - 4047 13 novel_not_in_catalog ERCC8 novel NA NA NA NA no_subtype TRUE canonical NA NA 132 None 2 22 1 TRUE 0 0 NA A coding 396 1188 56 1243 PB.10995.21 chrX - 2032 12 novel_in_catalog ALAS2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 28 None 14 2 0 FALSE 0 0 NA C coding 587 1761 151 1911 PB.663.4 chr1 - 1839 2 genic_intron novelGene_1241 novel NA NA NA NA no_subtype FALSE canonical NA NA 201 None 5 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7128.2 chr12 - 3508 15 full-splice_match NAP1L1 ENST00000618691.4 13505 15 402 9595 no_subtype FALSE canonical NA NA 65 None 12 19 0 FALSE 0 0 NA C coding 391 1173 86 1258 PB.2376.1 chr3 + 894 6 full-splice_match GTPBP8 ENST00000383678.6 1360 6 66 400 no_subtype FALSE canonical NA NA 801 None 2 3 0 FALSE 0 0 NA A coding 284 852 17 868 PB.7128.4 chr12 - 1450 16 full-splice_match NAP1L1 ENST00000393263.7 1896 16 -18 464 no_subtype FALSE canonical NA NA 118 None 26 1 0 FALSE 0 0 NA C coding 391 1173 139 1311 PB.7128.7 chr12 - 1351 14 full-splice_match NAP1L1 ENST00000535020.6 1686 14 -104 439 no_subtype FALSE canonical NA NA 150 None 3 1 0 FALSE 0 0 NA C coding 383 1149 171 1319 PB.7128.6 chr12 - 1440 16 novel_in_catalog NAP1L1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 117 None 9 2 0 FALSE 0 0 NA C coding 391 1173 138 1310 PB.352.5 chr1 - 1862 7 novel_in_catalog EFCAB14 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1201 None 2 2 0 FALSE 0 0 NA C coding 282 846 1017 1862 PB.352.1 chr1 - 3033 1 incomplete-splice_match EFCAB14 ENST00000371933.7 5767 11 2731 4 no_subtype FALSE canonical NA NA NA None 11 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.352.2 chr1 - 2674 11 full-splice_match EFCAB14 ENST00000371933.7 5767 11 -50 3143 no_subtype FALSE canonical NA NA 1212 None 70 2 0 FALSE 0 0 NA C coding 495 1485 1028 2512 PB.352.3 chr1 - 2564 10 novel_in_catalog EFCAB14 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1211 None 85 2 0 FALSE 0 0 NA C coding 431 1293 1027 2319 PB.4446.1 chr7 + 2936 3 genic POM121B novel NA NA NA NA no_subtype FALSE canonical NA NA 778 None 8 10 0 TRUE 0 0 NA A coding 237 711 163 873 PB.6117.1 chr11 - 2597 10 full-splice_match SLC25A22 ENST00000628067.2 2692 10 88 7 no_subtype FALSE canonical NA NA 29 None 12 17 1 FALSE 0 0 NA C coding 323 969 193 1161 PB.6117.2 chr11 - 2588 11 novel_not_in_catalog SLC25A22 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 55 None 2 8 2 TRUE 0 0 NA C coding 323 969 219 1187 PB.6117.3 chr11 - 3461 9 novel_in_catalog SLC25A22 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 55 None 2 17 1 FALSE 0 0 NA C coding 266 798 1228 2025 PB.6117.4 chr11 - 2696 9 novel_in_catalog SLC25A22 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 55 None 3 11 1 FALSE 0 0 NA C coding 439 1317 219 1535 PB.1191.2 chr2 + 1587 6 full-splice_match PQLC3 ENST00000402361.5 696 6 -58 -833 no_subtype FALSE canonical NA NA 466 None 2 9 1 FALSE 0 0 NA C coding 120 360 71 430 PB.1191.1 chr2 + 1714 7 full-splice_match PQLC3 ENST00000295083.7 1830 7 95 21 no_subtype FALSE canonical NA NA 597 None 31 8 0 FALSE 0 0 NA C coding 202 606 81 686 PB.3078.7 chr4 - 3743 2 genic_intron novelGene_1234 novel NA NA NA NA no_subtype FALSE canonical NA NA 1998 None 7 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2524.1 chr3 - 1550 5 full-splice_match TM4SF1 ENST00000305366.7 1771 5 217 4 no_subtype FALSE canonical NA NA 278 None 17 2 0 FALSE 0 0 NA A coding 202 606 102 707 PB.6662.11 chr11 - 6244 3 genic_intron novelGene_1041 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 898 None 2 38 2 FALSE 0 0 NA A coding 115 345 2546 2890 PB.10841.2 chr22 - 6453 37 novel_not_in_catalog PLXNB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 94 None 2 20 1 TRUE 0 0 NA B coding 804 2412 3318 5729 PB.6383.1 chr11 + 1890 2 full-splice_match UQCC3 ENST00000377953.3 1947 2 24 33 no_subtype FALSE canonical NA NA 188 None 4 14 0 FALSE 0 0 NA A coding 93 279 69 347 PB.4492.2 chr7 - 2813 12 full-splice_match SLC25A40 ENST00000341119.9 4045 12 -2 1234 no_subtype TRUE canonical NA NA 256 None 12 19 0 FALSE 0 0 NA A coding 338 1014 350 1363 PB.1171.3 chr2 - 5515 23 full-splice_match PXDN ENST00000252804.8 6808 23 -8 1301 no_subtype FALSE canonical NA NA 259 None 6 4 0 FALSE 0 0 NA C coding 1479 4437 60 4496 PB.1171.2 chr2 - 5397 22 novel_in_catalog PXDN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 213 None 4 3 1 FALSE 0 0 NA C coding 1455 4365 14 4378 PB.9788.3 chr19 + 3452 6 novel_not_in_catalog ZNF700 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3405 None 2 12 1 TRUE 0 0 NA B coding 758 2274 222 2495 PB.9788.2 chr19 + 3026 5 novel_not_in_catalog ZNF700 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 540 None 2 11 1 FALSE 0 0 NA B coding 726 2178 338 2515 PB.9788.1 chr19 + 2839 4 fusion ZNF700,ZNF439 novel NA NA NA NA no_subtype FALSE canonical NA NA 353 None 2 12 0 FALSE 0 0 NA A coding 742 2226 103 2328 PB.3630.1 chr5 - 2953 2 novel_in_catalog ATP10B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 189 None 4 20 0 FALSE 0 0 NA A coding 198 594 41 634 PB.4185.1 chr6 + 4023 2 novel_not_in_catalog STXBP5 novel NA NA NA NA no_subtype TRUE canonical NA NA 2158 None 2 30 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.8873.1 chr17 + 3193 1 incomplete-splice_match ZFP3 ENST00000318833.3 5206 2 2007 7 no_subtype FALSE canonical NA NA NA None 3 26 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9448.1 chr17 - 1613 8 full-splice_match DCXR ENST00000306869.6 887 8 -5 -721 no_subtype FALSE canonical NA NA 107 None 8 7 0 FALSE 0 0 NA A coding 244 732 56 787 PB.1371.1 chr2 - 2822 2 antisense novelGene_MDH1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1888 None 4 20 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9134.2 chr17 + 3048 9 novel_in_catalog STAT5A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1094 None 5 14 0 FALSE 0 0 NA C coding 390 1170 106 1275 PB.2598.1 chr3 - 5659 1 genic_intron novelGene_1337 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 33 0 FALSE 0 0 NA A coding 111 333 3844 4176 PB.10086.1 chr19 + 753 6 full-splice_match SEPW1 ENST00000601048.5 888 6 136 -1 no_subtype FALSE canonical NA NA 360 None 7 2 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7936.1 chr14 + 1807 11 full-splice_match TRAF3 ENST00000560371.5 7640 11 75 5758 no_subtype FALSE canonical NA NA 1277 None 2 4 0 FALSE 0 0 NA C coding 555 1665 143 1807 PB.7860.6 chr14 + 1440 1 genic_intron novelGene_836 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9447.2 chr17 + 2677 17 full-splice_match LRRC45 ENST00000306688.7 2701 17 19 5 no_subtype FALSE canonical NA NA 2139 None 11 5 0 FALSE 0 0 NA C coding 670 2010 324 2333 PB.577.1 chr1 - 1705 10 full-splice_match PPM1J ENST00000309276.10 1863 10 148 10 no_subtype FALSE canonical NA NA 354 None 4 1 0 FALSE 0 0 NA A coding 505 1515 29 1543 PB.1577.3 chr2 - 2837 14 novel_in_catalog IWS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 183 None 3 2 0 FALSE 0 0 NA C coding 824 2472 135 2606 PB.4454.1 chr7 - 1402 1 full-splice_match CLDN3 ENST00000395145.3 1274 1 -130 2 no_subtype FALSE canonical NA NA NA None 9 5 0 FALSE 0 0 NA A coding 220 660 352 1011 PB.1181.1 chr2 - 3159 3 genic_intron novelGene_62 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2871 None 2 17 1 FALSE 0 0 NA A coding 177 531 2054 2584 PB.6421.1 chr11 - 2487 7 novel_not_in_catalog CDCA5 novel NA NA NA NA no_subtype FALSE canonical NA NA 136 None 2 10 1 TRUE 0 0 NA A coding 252 756 91 846 PB.7959.4 chr14 - 1494 7 fusion IGHA2,IGHV4-4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 13 2 TRUE 0 0 NA B coding 131 393 11 403 PB.10758.1 chr22 + 1687 5 full-splice_match KDELR3 ENST00000216014.8 1728 5 32 9 no_subtype FALSE canonical NA NA 744 None 14 10 0 FALSE 0 0 NA A coding 214 642 141 782 PB.8461.1 chr16 + 6073 29 incomplete-splice_match ABCC1 ENST00000399410.7 6552 31 456 23 internal_fragment FALSE canonical NA NA 4206 None 3 12 0 FALSE 0 0 NA A coding 1415 4245 68 4312 PB.11124.1 chrX + 1157 4 full-splice_match SLC25A5 ENST00000317881.8 1274 4 91 26 no_subtype FALSE canonical NA NA 764 None 57 2 0 FALSE 0 0 NA A coding 298 894 26 919 PB.9843.3 chr19 + 3251 9 novel_not_in_catalog TPM4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1514 None 2 20 0 TRUE 0 0 NA B coding 152 456 99 554 PB.9843.2 chr19 + 1783 9 novel_not_in_catalog TPM4 novel NA NA NA NA no_subtype FALSE canonical NA NA 709 None 106 5 0 TRUE 0 0 NA B coding 248 744 46 789 PB.9843.1 chr19 + 1932 10 novel_not_in_catalog TPM4 novel NA NA NA NA no_subtype FALSE canonical NA NA 859 None 4 7 0 TRUE 0 0 NA B coding 284 852 88 939 PB.4199.3 chr6 - 4019 20 novel_in_catalog SYNE1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 119 None 4 4 0 FALSE 0 0 NA B coding 1022 3066 213 3278 PB.1517.1 chr2 - 1723 8 novel_not_in_catalog RNF149 novel NA NA NA NA no_subtype TRUE canonical NA NA 283 None 4 9 0 TRUE 0 0 NA C coding 251 753 271 1023 PB.3146.10 chr4 - 5734 20 novel_in_catalog ACSL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 136 None 2 8 0 FALSE 0 0 NA C coding 365 1095 3116 4210 PB.10849.1 chrX - 2044 13 full-splice_match ASMTL ENST00000381317.8 2027 13 -29 12 no_subtype TRUE canonical NA NA 155 None 3 3 1 FALSE 0 0 NA C coding 621 1863 63 1925 PB.10849.2 chrX - 1648 9 novel_in_catalog ASMTL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 122 None 2 5 0 FALSE 0 0 NA C coding 417 1251 30 1280 PB.7750.1 chr14 + 2924 7 novel_not_in_catalog RHOJ novel NA NA NA NA no_subtype TRUE canonical NA NA 2229 None 2 19 1 TRUE 0 0 NA A coding 214 642 442 1083 PB.1577.2 chr2 - 2967 14 full-splice_match IWS1 ENST00000295321.8 2958 14 -21 12 no_subtype FALSE canonical NA NA 315 None 39 4 0 FALSE 0 0 NA C coding 819 2457 282 2738 PB.6782.2 chr12 + 1187 6 full-splice_match CD27 ENST00000266557.3 1338 6 138 13 no_subtype FALSE canonical NA NA 749 None 4 2 0 FALSE 0 0 NA A coding 260 780 92 871 PB.6782.3 chr12 + 2936 12 fusion CD27,TAPBPL novel NA NA NA NA no_subtype FALSE canonical NA NA 2531 None 2 4 0 FALSE 0 0 NA A coding 317 951 1631 2581 PB.6782.4 chr12 + 1700 7 full-splice_match TAPBPL ENST00000266556.7 1741 7 40 1 no_subtype FALSE canonical NA NA 1416 None 36 6 0 FALSE 0 0 NA C coding 468 1404 126 1529 PB.6782.5 chr12 + 1903 7 novel_not_in_catalog TAPBPL novel NA NA NA NA no_subtype FALSE canonical NA NA 1498 None 11 8 0 FALSE 0 0 NA C coding 447 1341 208 1548 PB.10064.1 chr19 + 1783 5 antisense novelGene_SYMPK_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1567 None 2 17 3 FALSE 0 0 NA A coding 127 381 169 549 PB.6782.7 chr12 + 1849 7 novel_not_in_catalog TAPBPL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1467 None 8 8 0 TRUE 0 0 NA C coding 464 1392 128 1519 PB.7959.7 chr14 - 1486 8 fusion IGHA2,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 13 1 TRUE 0 0 NA B coding 109 327 11 337 PB.2231.5 chr3 + 3387 3 novel_not_in_catalog ALAS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1380 None 3 20 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.6133.1 chr11 + 1453 1 antisense novelGene_AC132217.4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 12 11 0 FALSE 0 0 NA A coding 185 555 297 851 PB.2231.3 chr3 + 2184 12 novel_not_in_catalog ALAS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1878 None 10 1 0 TRUE 0 0 NA B coding 640 1920 117 2036 PB.8387.2 chr16 + 3143 12 novel_not_in_catalog AMDHD2 novel NA NA NA NA no_subtype TRUE canonical NA NA 2954 None 8 13 1 TRUE 0 0 NA C coding 409 1227 73 1299 PB.8387.1 chr16 + 1447 11 full-splice_match AMDHD2 ENST00000293971.10 1459 11 41 -29 no_subtype FALSE canonical NA NA 1194 None 21 2 0 FALSE 0 0 NA C coding 409 1227 54 1280 PB.8052.3 chr15 + 1947 1 incomplete-splice_match CASC4 ENST00000345795.6 3764 9 1817 1 no_subtype FALSE canonical NA NA NA None 9 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6877.5 chr12 + 3147 1 genic_intron novelGene_266 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8052.1 chr15 + 3949 10 full-splice_match CASC4 ENST00000299957.10 3962 10 5 8 no_subtype FALSE canonical NA NA 1534 None 5 18 1 FALSE 0 0 NA C coding 436 1308 295 1602 PB.8052.4 chr15 + 3010 13 full-splice_match CTDSPL2 ENST00000260327.8 6828 13 396 3422 no_subtype FALSE canonical NA NA 1502 None 9 3 0 FALSE 0 0 NA C coding 466 1398 168 1565 PB.7035.1 chr12 + 1429 7 full-splice_match NABP2 ENST00000267023.8 1417 7 -15 3 no_subtype FALSE canonical NA NA 591 None 4 5 1 FALSE 0 0 NA A coding 254 762 27 788 PB.3146.13 chr4 - 3651 3 novel_not_in_catalog ACSL1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1201 None 3 26 1 TRUE 0 0 NA C coding 124 372 2222 2593 PB.2790.1 chr4 + 2782 14 full-splice_match PGM2 ENST00000381967.8 3264 14 85 397 no_subtype FALSE canonical NA NA 1751 None 11 9 0 FALSE 0 0 NA A coding 612 1836 16 1851 PB.5118.3 chr8 - 3655 2 novel_not_in_catalog LINC00861 novel NA NA NA NA no_subtype FALSE canonical NA NA 621 None 3 16 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.1502.2 chr2 - 2706 16 full-splice_match MGAT4A ENST00000393487.5 8382 16 31 5645 no_subtype FALSE canonical NA NA 48 None 44 4 0 FALSE 0 0 NA A coding 535 1605 284 1888 PB.5118.1 chr8 - 1364 5 novel_not_in_catalog LINC00861 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 234 None 2 2 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.429.5 chr1 + 2937 13 novel_in_catalog SRSF11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1524 None 2 7 0 FALSE 0 0 NA B coding 294 882 838 1719 PB.6885.1 chr12 + 2542 13 novel_in_catalog CCDC91 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1445 None 2 11 1 FALSE 0 0 NA A coding 441 1323 231 1553 PB.8459.26 chr16 - 3855 28 incomplete-splice_match MYH11 ENST00000300036.5 6029 41 6 2168 internal_fragment FALSE canonical NA NA 87 None 2 4 0 FALSE 0 0 NA C coding 1250 3750 105 3854 PB.8459.27 chr16 - 3145 24 novel_not_in_catalog MYH11 novel NA NA NA NA no_subtype FALSE canonical NA NA 87 None 227 4 1 FALSE 0 0 NA C coding 729 2187 959 3145 PB.9460.2 chr18 + 2823 16 novel_not_in_catalog USP14 novel NA NA NA NA no_subtype TRUE canonical NA NA 1359 None 4 7 0 TRUE 0 0 NA C coding 459 1377 132 1508 PB.8459.21 chr16 - 3057 15 novel_not_in_catalog MYH11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 117 None 2 9 0 TRUE 0 0 NA C coding 656 1968 142 2109 PB.429.3 chr1 + 2697 12 novel_in_catalog SRSF11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1293 None 21 5 0 FALSE 0 0 NA B coding 483 1449 37 1485 PB.9460.1 chr18 + 2911 16 full-splice_match USP14 ENST00000261601.7 4921 16 -23 2033 no_subtype FALSE canonical NA NA 1447 None 13 7 0 FALSE 0 0 NA C coding 494 1482 115 1596 PB.10750.1 chr22 + 1922 2 novel_not_in_catalog H1F0 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1832 None 2 10 0 FALSE 0 0 NA C coding 194 582 317 898 PB.5178.1 chr8 - 1404 2 full-splice_match CYHR1 ENST00000403000.6 1477 2 59 14 no_subtype FALSE canonical NA NA 622 None 7 7 0 FALSE 0 0 NA C coding 192 576 530 1105 PB.5178.2 chr8 - 1569 1 novel_in_catalog CYHR1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10750.2 chr22 + 2195 1 full-splice_match H1F0 ENST00000340857.3 2344 1 136 13 no_subtype FALSE canonical NA NA NA None 11 14 0 FALSE 0 0 NA C coding 194 582 317 898 PB.8459.28 chr16 - 3250 25 novel_not_in_catalog MYH11 novel NA NA NA NA no_subtype FALSE canonical NA NA 88 None 6 1 0 FALSE 0 0 NA C coding 1017 3051 199 3249 PB.8459.29 chr16 - 3171 25 incomplete-splice_match MYH11 ENST00000396324.7 6847 42 -16 3692 internal_fragment FALSE canonical NA NA 87 None 71 3 1 FALSE 0 0 NA C coding 1022 3066 105 3170 PB.4867.1 chr8 + 2641 4 full-splice_match LEPROTL1 ENST00000321250.12 3173 4 70 462 no_subtype FALSE canonical NA NA 324 None 59 10 0 FALSE 0 0 NA A coding 131 393 46 438 PB.1798.1 chr2 + 4031 11 novel_not_in_catalog CASP10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1536 None 4 22 3 TRUE 0 0 NA A coding 267 801 887 1687 PB.7931.1 chr14 + 2074 3 full-splice_match WDR20 ENST00000342702.7 2391 3 19 298 no_subtype FALSE canonical NA NA 444 None 2 1 0 FALSE 0 0 NA A coding 569 1707 13 1719 PB.8448.1 chr16 + 1500 9 novel_in_catalog MKL2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 851 None 2 5 1 FALSE 0 0 NA B coding 291 873 159 1031 PB.1877.3 chr2 - 1662 15 full-splice_match DNPEP ENST00000273075.8 2425 15 110 653 no_subtype FALSE canonical NA NA 147 None 20 1 0 FALSE 0 0 NA C coding 475 1425 142 1566 PB.3227.1 chr5 - 3397 18 novel_not_in_catalog OXCT1 novel NA NA NA NA no_subtype TRUE canonical NA NA 260 None 42 16 0 TRUE 0 0 NA A coding 520 1560 183 1742 PB.6218.1 chr11 - 1511 1 genic_intron novelGene_120 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1538.2 chr2 - 3872 12 novel_not_in_catalog EDAR novel NA NA NA NA no_subtype TRUE canonical NA NA 68 None 3 17 0 FALSE 0 0 NA A coding 465 1395 36 1430 PB.9853.1 chr19 - 3148 3 full-splice_match MED26 ENST00000263390.7 3174 3 2 24 no_subtype FALSE canonical NA NA 333 None 4 12 0 FALSE 0 0 NA A coding 600 1800 262 2061 PB.9853.2 chr19 - 1423 1 full-splice_match CTD-3222D19.4 ENST00000625135.1 1830 1 370 37 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9581.3 chr18 - 1652 13 full-splice_match LMAN1 ENST00000251047.5 5521 13 696 3173 no_subtype FALSE canonical NA NA 236 None 5 1 0 FALSE 0 0 NA A coding 510 1530 23 1552 PB.7968.3 chr15 - 6703 41 incomplete-splice_match HERC2 ENST00000261609.11 15337 93 8389 245 5prime_fragment FALSE canonical NA NA 171 None 3 4 0 FALSE 0 0 NA B coding 2058 6174 49 6222 PB.4171.1 chr6 + 2794 1 incomplete-splice_match PHACTR2 ENST00000427704.6 9531 13 3529 3209 no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4852.10 chr8 + 3978 31 novel_not_in_catalog PTK2B novel NA NA NA NA no_subtype FALSE canonical NA NA 2888 None 4 8 0 TRUE 0 0 NA B coding 967 2901 201 3101 PB.10657.2 chr22 - 2607 9 novel_not_in_catalog MAPK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 169 None 2 6 0 TRUE 0 0 NA B coding 263 789 159 947 PB.10657.1 chr22 - 2787 1 incomplete-splice_match MAPK1 ENST00000215832.10 11022 9 2350 5886 no_subtype FALSE canonical NA NA NA None 12 6 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4333.1 chr7 - 1642 3 novel_not_in_catalog OSBPL3 novel NA NA NA NA no_subtype FALSE canonical NA NA 270 None 2 7 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.1699.1 chr2 + 1766 12 incomplete-splice_match ITGA6 ENST00000264107.11 5618 26 38 3814 3prime_fragment FALSE canonical NA NA 1745 None 4 0 0 FALSE 0 0 NA B coding 523 1569 197 1765 PB.1699.2 chr2 + 3559 26 novel_not_in_catalog ITGA6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3392 None 2 4 1 TRUE 0 0 NA B coding 1047 3141 201 3341 PB.1699.3 chr2 + 5606 27 novel_not_in_catalog ITGA6 novel NA NA NA NA no_subtype FALSE canonical NA NA 5196 None 3 23 1 TRUE 0 0 NA B coding 1073 3219 201 3419 PB.474.3 chr1 + 2930 2 genic_intron novelGene_817 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2571 None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.643.1 chr1 + 1301 6 full-splice_match FCGR1A ENST00000369168.4 2180 6 21 858 no_subtype FALSE canonical NA NA 877 None 3 2 0 FALSE 0 0 NA A coding 374 1122 34 1155 PB.2409.1 chr3 + 1405 2 full-splice_match NDUFB4 ENST00000485064.1 1426 2 8 13 no_subtype FALSE canonical NA NA 204 None 2 6 0 FALSE 0 0 NA A coding 120 360 25 384 PB.421.1 chr1 + 4376 13 full-splice_match MIER1 ENST00000355356.3 4818 13 75 367 no_subtype FALSE canonical NA NA 1284 None 2 22 0 FALSE 0 0 NA C coding 512 1536 75 1610 PB.421.2 chr1 + 1623 1 novel_in_catalog MIER1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9870.1 chr19 + 3168 29 novel_not_in_catalog FCHO1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2892 None 4 3 1 FALSE 0 0 NA B coding 493 1479 1434 2912 PB.9870.3 chr19 + 2954 2 novel_in_catalog FCHO1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 89 None 2 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9870.2 chr19 + 3048 28 novel_not_in_catalog FCHO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2796 None 3 4 1 FALSE 0 0 NA B coding 493 1479 1338 2816 PB.8629.2 chr16 - 6139 2 antisense novelGene_NLRC5_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3399 None 2 55 1 FALSE 0 0 NA B coding 132 396 3754 4149 PB.9870.4 chr19 + 3193 29 novel_not_in_catalog FCHO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2916 None 3 4 1 FALSE 0 0 NA B coding 493 1479 1458 2936 PB.9870.6 chr19 + 2989 26 novel_not_in_catalog FCHO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2712 None 2 2 1 FALSE 0 0 NA B coding 493 1479 1254 2732 PB.1907.14 chr2 + 2807 28 novel_not_in_catalog SP100 novel NA NA NA NA no_subtype FALSE canonical NA NA 2483 None 2 8 0 FALSE 0 0 NA B coding 838 2514 78 2591 PB.702.8 chr1 + 3836 26 novel_in_catalog UBAP2L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3210 None 4 4 0 FALSE 0 0 NA C coding 1067 3201 46 3246 PB.2680.1 chr3 + 1892 5 novel_not_in_catalog MUC20 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1494 None 9 7 0 TRUE 0 0 NA A coding 500 1500 61 1560 PB.3363.1 chr5 + 615 3 full-splice_match COX7C ENST00000247655.3 666 3 44 7 no_subtype FALSE canonical NA NA 327 None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.702.2 chr1 + 3772 27 full-splice_match UBAP2L ENST00000428931.5 3988 27 102 114 no_subtype FALSE canonical NA NA 3233 None 17 3 0 FALSE 0 0 NA C coding 1086 3258 69 3326 PB.9890.1 chr19 + 3177 23 incomplete-splice_match UPF1 ENST00000599848.5 5311 24 478 1656 internal_fragment TRUE canonical NA NA 3124 None 2 10 2 FALSE 0 0 NA A coding 765 2295 824 3118 PB.6660.1 chr11 - 1673 8 full-splice_match FXYD6 ENST00000526014.5 2171 8 527 -29 no_subtype FALSE canonical NA NA 64 None 24 6 0 FALSE 0 0 NA A coding 95 285 70 354 PB.5031.1 chr8 + 1854 8 full-splice_match CPQ ENST00000220763.9 1947 8 87 6 no_subtype FALSE canonical NA NA 1378 None 8 3 0 FALSE 0 0 NA A coding 472 1416 124 1539 PB.702.5 chr1 + 3803 28 novel_not_in_catalog UBAP2L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3308 None 4 6 2 TRUE 0 0 NA C coding 1103 3309 93 3401 PB.702.4 chr1 + 3776 27 novel_in_catalog UBAP2L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3281 None 4 2 0 FALSE 0 0 NA C coding 1086 3258 117 3374 PB.348.9 chr1 - 1607 1 novel_in_catalog MKNK1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 15 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2786.1 chr4 - 2918 1 novel_in_catalog ARAP2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 30 0 FALSE 0 0 NA B coding 67 201 182 382 PB.435.1 chr1 + 2944 4 full-splice_match FPGT ENST00000370898.7 3254 4 56 254 no_subtype FALSE canonical NA NA 354 None 24 9 0 FALSE 0 0 NA A coding 594 1782 12 1793 PB.2213.2 chr3 - 1838 4 full-splice_match HYAL2 ENST00000395139.7 2136 4 285 13 no_subtype FALSE canonical NA NA 63 None 2 3 0 FALSE 0 0 NA C coding 473 1419 110 1528 PB.2213.1 chr3 - 1921 4 full-splice_match HYAL2 ENST00000357750.8 2055 4 116 18 no_subtype FALSE canonical NA NA 138 None 15 2 0 FALSE 0 0 NA C coding 473 1419 185 1603 PB.3243.7 chr5 + 2811 25 novel_not_in_catalog PARP8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2435 None 18 0 0 FALSE 0 0 NA C coding 607 1821 715 2535 PB.1663.5 chr2 - 2885 2 genic_intron novelGene_1277 novel NA NA NA NA no_subtype FALSE canonical NA NA 1870 None 3 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5192.6 chr9 + 1800 3 novel_not_in_catalog DOCK8 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1339 None 4 11 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.3243.4 chr5 + 3105 26 novel_not_in_catalog PARP8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2737 None 4 5 0 TRUE 0 0 NA C coding 853 2559 279 2837 PB.348.5 chr1 - 2630 13 novel_not_in_catalog MKNK1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 58 None 10 14 0 FALSE 0 0 NA C coding 424 1272 208 1479 PB.5192.1 chr9 + 1654 2 novel_not_in_catalog DOCK8 novel NA NA NA NA no_subtype TRUE canonical NA NA 1357 None 2 13 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.5192.2 chr9 + 7434 49 novel_not_in_catalog DOCK8 novel NA NA NA NA no_subtype TRUE canonical NA NA 6348 None 7 6 0 TRUE 0 0 NA B coding 2099 6297 110 6406 PB.348.6 chr1 - 2714 14 novel_in_catalog MKNK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 50 None 2 16 0 FALSE 0 0 NA C coding 412 1236 322 1557 PB.734.4 chr1 - 2794 14 novel_in_catalog KIAA0907 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 52 None 6 11 0 FALSE 0 0 NA C coding 384 1152 15 1166 PB.6060.1 chr10 - 556 1 full-splice_match RP11-572P18.1 ENST00000495531.1 483 1 -40 -33 no_subtype FALSE canonical NA NA NA None 6 1 0 FALSE 0 0 NA A coding 160 480 41 520 PB.6576.3 chr11 - 3484 19 novel_in_catalog PICALM novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 449 None 2 4 0 FALSE 0 0 NA C coding 602 1806 320 2125 PB.6576.2 chr11 - 3611 20 novel_in_catalog PICALM novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 441 None 2 5 0 FALSE 0 0 NA C coding 647 1941 312 2252 PB.4718.6 chr7 + 2847 2 genic_intron novelGene_1194 novel NA NA NA NA no_subtype FALSE canonical NA NA 848 None 4 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6576.7 chr11 - 1354 1 novel_in_catalog PICALM novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6576.6 chr11 - 1855 2 novel_not_in_catalog PICALM novel NA NA NA NA no_subtype FALSE canonical NA NA 331 None 2 13 1 TRUE 0 0 NA C coding 84 252 74 325 PB.6576.5 chr11 - 3486 20 novel_in_catalog PICALM novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 442 None 6 5 0 FALSE 0 0 NA C coding 605 1815 313 2127 PB.10623.1 chr22 + 5651 1 full-splice_match Y_RNA ENST00000384012.1 112 1 -5537 -2 no_subtype FALSE canonical NA NA NA None 9 36 0 FALSE 0 0 NA C coding 149 447 352 798 PB.10772.1 chr22 + 3183 12 novel_not_in_catalog TAB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1322 None 31 5 0 TRUE 0 0 NA C coding 504 1512 16 1527 PB.10772.2 chr22 + 3195 11 full-splice_match TAB1 ENST00000216160.10 3237 11 37 5 no_subtype FALSE canonical NA NA 1332 None 12 4 0 FALSE 0 0 NA C coding 504 1512 26 1537 PB.7728.3 chr14 + 2980 10 novel_not_in_catalog AP5M1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1706 None 2 13 2 TRUE 0 0 NA B coding 507 1521 266 1786 PB.7492.1 chr13 - 4001 14 novel_not_in_catalog RCBTB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 117 None 13 15 0 TRUE 0 0 NA A coding 531 1593 239 1831 PB.7728.1 chr14 + 2919 9 novel_not_in_catalog AP5M1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1649 None 67 7 1 TRUE 0 0 NA B coding 490 1470 260 1729 PB.1907.18 chr2 + 1960 22 novel_not_in_catalog SP100 novel NA NA NA NA no_subtype FALSE canonical NA NA 1939 None 2 1 0 FALSE 0 0 NA B coding 631 1893 68 1960 PB.6455.1 chr11 + 3834 22 incomplete-splice_match PACS1 ENST00000320580.8 4392 24 551 7 internal_fragment FALSE canonical NA NA 2258 None 2 5 0 FALSE 0 0 NA A coding 771 2313 59 2371 PB.6877.4 chr12 + 2830 7 full-splice_match FGFR1OP2 ENST00000229395.7 2924 7 181 -87 no_subtype FALSE canonical NA NA 785 None 4 25 0 FALSE 0 0 NA C coding 253 759 162 920 PB.6877.3 chr12 + 2623 1 novel_in_catalog FGFR1OP2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6877.2 chr12 + 2666 6 full-splice_match FGFR1OP2 ENST00000327214.5 2790 6 120 4 no_subtype FALSE canonical NA NA 615 None 70 27 0 FALSE 0 0 NA C coding 215 645 106 750 PB.6877.1 chr12 + 2861 8 novel_not_in_catalog FGFR1OP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 822 None 3 33 3 TRUE 0 0 NA C coding 138 414 264 677 PB.1907.19 chr2 + 6177 3 novel_not_in_catalog SP100 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5149 None 2 37 0 TRUE 0 0 NA B coding 108 324 668 991 PB.10124.1 chr19 - 1576 15 full-splice_match VRK3 ENST00000599538.5 2126 15 544 6 no_subtype FALSE canonical NA NA 57 None 11 2 0 FALSE 0 0 NA A coding 474 1422 122 1543 PB.7070.3 chr12 + 1860 4 full-splice_match USP15 ENST00000548524.5 648 4 -10 -1202 no_subtype FALSE canonical NA NA 374 None 3 11 0 FALSE 0 0 NA C coding 174 522 27 548 PB.9594.1 chr18 + 2938 1 genic_intron novelGene_603 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 15 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9186.4 chr17 - 2534 1 genic_intron novelGene_455 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 21 0 FALSE 0 0 NA A coding 113 339 518 856 PB.280.1 chr1 - 1814 8 full-splice_match RHBDL2 ENST00000372990.5 1837 8 0 23 no_subtype FALSE canonical NA NA 103 None 2 6 0 FALSE 0 0 NA A coding 303 909 229 1137 PB.9871.2 chr19 - 6438 23 novel_not_in_catalog JAK3 novel NA NA NA NA no_subtype TRUE canonical NA NA 71 None 2 33 1 TRUE 0 0 NA B coding 862 2586 814 3399 PB.6417.9 chr11 - 6250 41 novel_not_in_catalog ATG2A novel NA NA NA NA no_subtype FALSE canonical NA NA 292 None 2 8 3 FALSE 0 0 NA B coding 1901 5703 122 5824 PB.1907.15 chr2 + 3076 26 novel_not_in_catalog SP100 novel NA NA NA NA no_subtype FALSE canonical NA NA 2090 None 6 8 0 TRUE 0 0 NA B coding 852 2556 72 2627 PB.3216.16 chr5 - 1829 1 genic_intron novelGene_390 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2080.2 chr3 - 2615 1 incomplete-splice_match CMTM6 ENST00000205636.3 3863 4 1235 14 no_subtype FALSE canonical NA NA NA None 13 21 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6608.2 chr11 + 2732 6 incomplete-splice_match BIRC2 ENST00000227758.6 3743 9 -18 1029 3prime_fragment FALSE canonical NA NA 2540 None 5 9 0 FALSE 0 0 NA C coding 400 1200 1532 2731 PB.6608.1 chr11 + 3687 9 full-splice_match BIRC2 ENST00000227758.6 3743 9 49 7 no_subtype FALSE canonical NA NA 3013 None 45 13 0 FALSE 0 0 NA C coding 580 1740 1465 3204 PB.8526.1 chr16 - 2614 21 novel_not_in_catalog CLN3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 257 None 2 7 2 TRUE 0 0 NA A coding 438 1314 1063 2376 PB.3231.1 chr5 + 3085 8 full-splice_match ZNF131 ENST00000505606.6 3209 8 42 82 no_subtype FALSE canonical NA NA 1289 None 2 12 1 FALSE 0 0 NA A coding 589 1767 207 1973 PB.1907.17 chr2 + 1825 14 novel_not_in_catalog SP100 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1325 None 2 7 1 FALSE 0 0 NA B coding 379 1137 73 1209 PB.407.1 chr1 - 3817 25 incomplete-splice_match DOCK7 ENST00000637255.1 4071 29 273 -19 5prime_fragment FALSE canonical NA NA 72 None 3 3 0 FALSE 0 0 NA B coding 1115 3345 70 3414 PB.4875.2 chr8 - 6108 7 novel_not_in_catalog RAB11FIP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 424 None 8 13 0 TRUE 0 0 NA C coding 1276 3828 54 3881 PB.4875.1 chr8 - 3120 5 full-splice_match RAB11FIP1 ENST00000287263.8 6253 5 -18 3151 no_subtype FALSE canonical NA NA 415 None 16 4 0 FALSE 0 0 NA C coding 649 1947 45 1991 PB.407.2 chr1 - 2794 1 novel_in_catalog DOCK7 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1558.2 chr2 + 2686 12 novel_not_in_catalog ACTR3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1452 None 2 9 1 FALSE 0 0 NA C coding 163 489 171 659 PB.8754.3 chr16 + 3493 6 novel_not_in_catalog MON1B novel NA NA NA NA no_subtype FALSE canonical NA NA 1969 None 2 19 1 TRUE 0 0 NA C coding 372 1116 1052 2167 PB.1000.4 chr1 - 4049 4 novel_not_in_catalog SLC45A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 2 15 0 FALSE 0 0 NA C coding 397 1191 302 1492 PB.1558.1 chr2 + 2073 12 full-splice_match ACTR3 ENST00000263238.6 6718 12 191 4454 no_subtype FALSE canonical NA NA 1290 None 264 1 0 FALSE 0 0 NA C coding 418 1254 130 1383 PB.171.12 chr1 + 2641 17 novel_in_catalog RPS6KA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1698 None 2 2 0 FALSE 0 0 NA C coding 578 1734 85 1818 PB.8754.2 chr16 + 3039 6 full-splice_match MON1B ENST00000248248.7 6091 6 283 2769 no_subtype FALSE canonical NA NA 1510 None 16 9 0 FALSE 0 0 NA C coding 547 1641 68 1708 PB.2196.1 chr3 + 5312 3 full-splice_match DAG1 ENST00000308775.6 5522 3 205 5 no_subtype FALSE canonical NA NA 498 None 4 23 0 FALSE 0 0 NA C coding 893 2679 220 2898 PB.9015.1 chr17 - 3212 2 novel_in_catalog MYO18A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 103 None 4 14 0 FALSE 0 0 NA B coding 353 1059 185 1243 PB.6220.1 chr11 - 1585 5 full-splice_match CYP2R1 ENST00000334636.9 2235 5 71 579 no_subtype FALSE canonical NA NA 201 None 2 1 0 FALSE 0 0 NA A coding 465 1395 85 1479 PB.1907.12 chr2 + 2116 26 novel_not_in_catalog SP100 novel NA NA NA NA no_subtype FALSE canonical NA NA 2036 None 10 1 0 TRUE 0 0 NA B coding 679 2037 78 2114 PB.5192.3 chr9 + 2992 1 genic_intron novelGene_4 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7700.1 chr14 + 3446 5 novel_not_in_catalog GNG2 novel NA NA NA NA no_subtype FALSE canonical NA NA 217 None 113 16 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.6266.1 chr11 + 3652 2 genic_intron novelGene_329 novel NA NA NA NA no_subtype FALSE canonical NA NA 319 None 2 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7700.3 chr14 + 1702 1 genic_intron novelGene_519 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7700.2 chr14 + 3393 3 full-splice_match GNG2 ENST00000556752.2 3424 3 23 8 no_subtype FALSE canonical NA NA 159 None 7 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7700.5 chr14 + 2873 1 novel_in_catalog GNG2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10399.1 chr20 + 1230 5 full-splice_match PKIG ENST00000372892.7 1338 5 105 3 no_subtype FALSE canonical NA NA 480 None 2 4 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7700.6 chr14 + 1438 1 incomplete-splice_match GNG2 ENST00000556752.2 3424 3 1983 4 no_subtype FALSE canonical NA NA NA None 14 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9708.4 chr19 - 3560 20 novel_not_in_catalog KHSRP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 99 None 3 12 0 TRUE 0 0 NA B coding 603 1809 385 2193 PB.1683.1 chr2 + 3825 5 novel_not_in_catalog KLHL23 novel NA NA NA NA no_subtype TRUE canonical NA NA 2112 None 2 15 0 TRUE 0 0 NA B coding 558 1674 242 1915 PB.9708.2 chr19 - 3834 20 novel_not_in_catalog KHSRP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 76 None 4 17 0 TRUE 0 0 NA B coding 603 1809 355 2163 PB.6843.1 chr12 - 3001 1 genic_intron novelGene_115 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1683.2 chr2 + 3222 5 novel_not_in_catalog KLHL23 novel NA NA NA NA no_subtype FALSE canonical NA NA 1509 None 2 15 0 TRUE 0 0 NA B coding 296 888 425 1312 PB.2538.9 chr3 + 2747 1 novel_in_catalog MBNL1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 25 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6095.1 chr10 + 2607 1 genic_intron novelGene_1148 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A coding 154 462 1905 2366 PB.7114.1 chr12 - 2106 2 genic_intron novelGene_661 novel NA NA NA NA no_subtype FALSE canonical NA NA 1181 None 2 16 1 FALSE 0 0 NA A coding 46 138 157 294 PB.10116.1 chr19 - 1518 1 novel_in_catalog PNKP novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA C coding 118 354 349 702 PB.1056.3 chr1 - 2763 18 novel_in_catalog EPRS novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 112 None 2 2 0 FALSE 0 0 NA B coding 665 1995 768 2762 PB.1056.2 chr1 - 2996 20 incomplete-splice_match EPRS ENST00000366923.7 5014 32 149 1869 internal_fragment FALSE canonical NA NA 167 None 179 1 0 FALSE 0 0 NA B coding 958 2874 122 2995 PB.1056.5 chr1 - 1826 14 incomplete-splice_match EPRS ENST00000366923.7 5014 32 180 3008 internal_fragment FALSE canonical NA NA 136 None 2 0 0 FALSE 0 0 NA B coding 578 1734 91 1824 PB.1056.4 chr1 - 2824 20 novel_not_in_catalog EPRS novel NA NA NA NA no_subtype FALSE canonical NA NA 70 None 2 2 2 TRUE 0 0 NA B coding 837 2511 25 2535 PB.1364.2 chr2 - 3867 22 incomplete-splice_match XPO1 ENST00000404992.6 4105 25 639 -401 5prime_fragment FALSE canonical NA NA 69 None 2 2 0 FALSE 0 0 NA A coding 940 2820 162 2981 PB.7263.1 chr12 + 1994 13 full-splice_match ALDH2 ENST00000261733.6 9569 13 23 7552 no_subtype FALSE canonical NA NA 1559 None 40 3 0 FALSE 0 0 NA C coding 517 1551 39 1589 PB.4206.1 chr6 - 3003 7 full-splice_match MTRF1L ENST00000367233.9 3676 7 -43 716 no_subtype FALSE canonical NA NA 302 None 26 12 0 FALSE 0 0 NA C coding 380 1140 44 1183 PB.78.1 chr1 + 3054 7 novel_not_in_catalog SLC25A34 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2795 None 4 8 2 TRUE 0 0 NA B coding 304 912 198 1109 PB.1478.1 chr2 - 3349 8 full-splice_match STARD7 ENST00000337288.9 3368 8 -4 23 no_subtype FALSE canonical NA NA 678 None 64 24 0 FALSE 0 0 NA A coding 370 1110 389 1498 PB.3435.2 chr5 + 6040 3 genic_intron novelGene_1045 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1099 None 2 40 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4793.1 chr8 - 1353 7 full-splice_match PINX1 ENST00000314787.7 1545 7 -8 200 no_subtype FALSE canonical NA NA 147 None 3 2 0 FALSE 0 0 NA A coding 328 984 129 1112 PB.4869.1 chr8 - 2668 13 full-splice_match GSR ENST00000221130.9 3119 13 132 319 no_subtype FALSE canonical NA NA 265 None 38 8 0 FALSE 0 0 NA A coding 479 1437 89 1525 PB.1372.1 chr2 + 2013 10 full-splice_match UGP2 ENST00000394417.6 2136 10 118 5 no_subtype FALSE canonical NA NA 1575 None 26 3 0 FALSE 0 0 NA C coding 497 1491 190 1680 PB.7192.1 chr12 + 2750 4 genic CHPT1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2509 None 2 24 3 TRUE 0 0 NA A non_coding NA NA NA NA PB.830.1 chr1 - 1974 11 full-splice_match ALDH9A1 ENST00000354775.4 2696 11 348 374 no_subtype FALSE canonical NA NA 138 None 20 2 0 FALSE 0 0 NA A coding 494 1482 30 1511 PB.9700.1 chr19 + 1194 1 novel_in_catalog HSD11B1L novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4598.2 chr7 + 1559 7 novel_in_catalog DUS4L novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 954 None 2 5 0 FALSE 0 0 NA A coding 317 951 249 1199 PB.5478.1 chr9 + 1635 12 novel_not_in_catalog CNTRL novel NA NA NA NA no_subtype FALSE canonical NA NA 1439 None 8 1 0 TRUE 0 0 NA B coding 439 1317 318 1634 PB.508.2 chr1 - 2769 1 genic_intron novelGene_906 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.508.1 chr1 - 3143 17 novel_not_in_catalog FRRS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 107 None 6 11 0 TRUE 0 0 NA A coding 592 1776 108 1883 PB.5478.2 chr9 + 5383 35 novel_not_in_catalog CNTRL novel NA NA NA NA no_subtype FALSE canonical NA NA 5297 None 2 3 0 TRUE 0 0 NA B coding 1671 5013 369 5381 PB.4411.20 chr7 + 2601 1 novel_in_catalog CCM2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA C coding 113 339 1635 1973 PB.4411.21 chr7 - 3788 1 antisense novelGene_CCM2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A coding 127 381 1452 1832 PB.3595.7 chr5 + 2845 12 novel_not_in_catalog G3BP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1390 None 2 15 0 FALSE 0 0 NA C coding 466 1398 197 1594 PB.10128.14 chr19 - 1415 9 novel_not_in_catalog NAPSB novel NA NA NA NA no_subtype FALSE canonical NA NA 92 None 4 3 0 FALSE 0 0 NA C coding 342 1026 389 1414 PB.10128.15 chr19 - 1536 3 full-splice_match NAPSB ENST00000525179.1 678 3 12 -870 no_subtype FALSE canonical NA NA 83 None 7 4 0 FALSE 0 0 NA C coding 223 669 1 669 PB.10128.11 chr19 - 1529 8 novel_in_catalog NAPSB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 92 None 3 4 0 FALSE 0 0 NA C coding 506 1518 10 1527 PB.8881.1 chr17 - 3742 3 novel_not_in_catalog PITPNM3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1978 None 3 21 1 TRUE 0 0 NA A coding 139 417 1393 1809 PB.5085.1 chr8 - 1550 9 full-splice_match DSCC1 ENST00000313655.4 2314 9 133 631 no_subtype FALSE canonical NA NA 264 None 2 5 0 FALSE 0 0 NA A coding 393 1179 83 1261 PB.4783.1 chr8 + 3390 8 full-splice_match AGPAT5 ENST00000285518.10 3685 8 286 9 no_subtype FALSE canonical NA NA 895 None 4 20 0 FALSE 0 0 NA A coding 364 1092 27 1118 PB.2212.1 chr3 - 2029 4 full-splice_match HYAL1 ENST00000395144.6 2081 4 45 7 no_subtype FALSE canonical NA NA 110 None 2 5 0 FALSE 0 0 NA A coding 435 1305 135 1439 PB.7991.1 chr15 - 3748 9 incomplete-splice_match RASGRP1 ENST00000539159.5 5021 17 1273 0 5prime_fragment FALSE canonical NA NA 147 None 2 18 0 FALSE 0 0 NA A coding 429 1287 10 1296 PB.7015.1 chr12 - 2053 11 full-splice_match TESPA1 ENST00000449076.5 2010 11 -47 4 no_subtype TRUE canonical NA NA 135 None 3 1 0 FALSE 0 0 NA A coding 521 1563 181 1743 PB.10467.2 chr20 + 2974 15 novel_not_in_catalog NELFCD novel NA NA NA NA no_subtype FALSE canonical NA NA 2501 None 3 6 0 TRUE 0 0 NA B coding 427 1281 1123 2403 PB.4030.2 chr6 - 2813 8 full-splice_match UBE2J1 ENST00000435041.2 4290 8 6 1471 no_subtype FALSE canonical NA NA 304 None 104 11 0 FALSE 0 0 NA C coding 303 909 319 1227 PB.1777.6 chr2 - 3961 23 incomplete-splice_match SF3B1 ENST00000335508.10 6526 25 371 2194 5prime_fragment TRUE canonical NA NA 21 None 2 1 0 FALSE 0 0 NA C coding 1179 3537 97 3633 PB.1993.1 chr3 + 2653 27 novel_not_in_catalog FANCD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2571 None 2 1 0 FALSE 0 0 NA A coding 858 2574 78 2651 PB.10039.2 chr19 + 3397 5 novel_in_catalog ZNF224 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 433 None 2 5 0 FALSE 0 0 NA C coding 707 2121 199 2319 PB.6682.1 chr11 - 475 5 full-splice_match RPS25 ENST00000527673.1 835 5 347 13 no_subtype FALSE canonical NA NA 62 None 2 1 0 FALSE 0 0 NA A coding 125 375 60 434 PB.6071.1 chr10 - 6971 3 genic_intron novelGene_1079 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 656 None 2 40 0 FALSE 0 0 NA B coding 171 513 1136 1648 PB.1777.9 chr2 - 6118 24 novel_in_catalog SF3B1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 75 None 11 5 0 FALSE 0 0 NA C coding 1158 3474 2325 5798 PB.1777.8 chr2 - 4242 25 full-splice_match SF3B1 ENST00000335508.10 6526 25 82 2202 no_subtype FALSE canonical NA NA 38 None 92 0 0 FALSE 0 0 NA C coding 1304 3912 11 3922 PB.877.1 chr1 + 2846 21 full-splice_match RABGAP1L ENST00000251507.8 2899 21 55 -2 no_subtype FALSE canonical NA NA 2552 None 3 2 0 FALSE 0 0 NA C coding 815 2445 120 2564 PB.6998.9 chr12 + 1484 13 full-splice_match PCBP2 ENST00000549863.5 1619 13 -22 157 no_subtype FALSE non_canonical NA NA 1277 None 3 4 1 FALSE 0 0 NA C coding 321 963 349 1311 PB.6998.8 chr12 + 1597 15 novel_not_in_catalog PCBP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1391 None 2 12 4 TRUE 0 0 NA C coding 235 705 350 1054 PB.8142.1 chr15 + 2721 3 genic SNX1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2481 None 5 15 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.500.1 chr1 + 3418 23 full-splice_match ABCD3 ENST00000370214.8 3538 23 -19 139 no_subtype FALSE canonical NA NA 1945 None 2 6 0 FALSE 0 0 NA C coding 659 1977 44 2020 PB.3173.1 chr5 - 2781 1 antisense novelGene_MTRR_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6998.6 chr12 + 1501 14 novel_in_catalog PCBP2 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 1298 None 12 4 0 FALSE 0 0 NA C coding 334 1002 331 1332 PB.6998.5 chr12 + 1479 13 novel_in_catalog PCBP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1268 None 2 2 0 FALSE 0 0 NA C coding 317 951 352 1302 PB.6998.4 chr12 + 1620 15 full-splice_match PCBP2 ENST00000359462.9 1814 15 -24 218 no_subtype FALSE non_canonical NA NA 1411 None 11 2 0 FALSE 0 0 NA C coding 366 1098 348 1445 PB.1654.3 chr2 - 3107 1 novel_in_catalog CYTIP novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5192.14 chr9 + 1464 1 genic_intron novelGene_9 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5192.10 chr9 + 2829 1 genic_intron novelGene_8 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10136.1 chr19 - 837 4 full-splice_match NKG7 ENST00000221978.9 843 4 -5 11 no_subtype FALSE canonical NA NA 342 None 10 3 0 FALSE 0 0 NA A coding 165 495 186 680 PB.10025.1 chr19 + 2819 3 full-splice_match ZNF526 ENST00000301215.7 4023 3 54 1150 no_subtype FALSE canonical NA NA 154 None 44 7 1 FALSE 0 0 NA A coding 670 2010 172 2181 PB.7539.1 chr13 - 3013 1 full-splice_match SP3P ENST00000414049.1 2065 1 457 -1405 no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A coding 126 378 1233 1610 PB.1298.1 chr2 + 1675 14 full-splice_match MTA3 ENST00000406911.5 2041 14 31 335 no_subtype FALSE canonical NA NA 1339 None 8 0 0 FALSE 0 0 NA A coding 514 1542 41 1582 PB.2690.2 chr3 + 3501 17 novel_not_in_catalog PAK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3180 None 5 22 2 TRUE 0 0 NA B coding 524 1572 304 1875 PB.4210.1 chr6 + 2545 1 novel_in_catalog TIAM2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 6 0 FALSE 0 0 NA A coding 107 321 686 1006 PB.5442.2 chr9 + 1308 11 novel_not_in_catalog HSDL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1196 None 2 5 1 FALSE 0 0 NA B coding 417 1251 56 1306 PB.7752.3 chr14 + 3035 23 novel_not_in_catalog SYNE2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2947 None 2 2 0 TRUE 0 0 NA B coding 956 2868 167 3034 PB.8307.2 chr15 + 2416 1 genic_intron novelGene_841 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7553.1 chr13 + 2139 9 full-splice_match UBAC2 ENST00000403766.7 1375 9 121 -885 no_subtype FALSE canonical NA NA 941 None 22 4 0 FALSE 0 0 NA A coding 344 1032 15 1046 PB.6072.2 chr10 - 6939 3 genic_intron novelGene_1080 novel NA NA NA NA no_subtype FALSE canonical NA NA 1693 None 6 29 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.6072.1 chr10 - 3483 1 genic_intron novelGene_1080 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10881.1 chrX + 2986 3 novel_not_in_catalog CA5B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2533 None 3 14 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.10881.2 chrX + 1532 13 novel_not_in_catalog CA5B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1078 None 2 21 6 TRUE 0 0 NA C coding 287 861 84 944 PB.2955.2 chr4 - 2944 2 genic_intron novelGene_811 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 625 None 2 37 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5460.17 chr9 - 5703 24 novel_not_in_catalog AKNA novel NA NA NA NA no_subtype FALSE canonical NA NA 196 None 2 15 0 TRUE 0 0 NA B coding 950 2850 1949 4798 PB.9762.3 chr19 - 2540 6 full-splice_match KEAP1 ENST00000171111.9 2955 6 407 8 no_subtype FALSE canonical NA NA 94 None 4 7 0 FALSE 0 0 NA C coding 624 1872 142 2013 PB.9762.1 chr19 - 2451 6 full-splice_match KEAP1 ENST00000393623.6 2648 6 183 14 no_subtype FALSE canonical NA NA 17 None 15 5 0 FALSE 0 0 NA C coding 624 1872 65 1936 PB.796.1 chr1 + 2735 1 genic LY9 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A coding 100 300 1766 2065 PB.1854.1 chr2 + 1398 11 full-splice_match ARPC2 ENST00000315717.9 1505 11 104 3 no_subtype TRUE canonical NA NA 943 None 129 1 0 FALSE 0 0 NA C coding 300 900 66 965 PB.3557.1 chr5 - 3303 1 genic_intron novelGene_1199 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3516.2 chr5 - 2164 8 full-splice_match TMEM173 ENST00000330794.8 1771 8 34 -427 no_subtype FALSE canonical NA NA 207 None 17 12 0 FALSE 0 0 NA A coding 379 1137 301 1437 PB.7634.1 chr14 - 1870 17 full-splice_match RABGGTA ENST00000216840.10 2088 17 201 17 no_subtype FALSE canonical NA NA 52 None 7 4 0 FALSE 0 0 NA A coding 567 1701 107 1807 PB.3093.5 chr4 - 2859 7 novel_not_in_catalog TMEM154 novel NA NA NA NA no_subtype FALSE canonical NA NA 146 None 7 10 0 FALSE 0 0 NA C coding 105 315 317 631 PB.5097.1 chr8 - 2676 4 genic_intron novelGene_1071 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 958 None 2 16 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.6071.2 chr10 - 2772 1 genic_intron novelGene_1079 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA B coding 101 303 1818 2120 PB.7081.2 chr12 + 2788 20 novel_in_catalog TBK1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2036 None 2 2 0 FALSE 0 0 NA C coding 669 2007 79 2085 PB.7081.1 chr12 + 2927 21 full-splice_match TBK1 ENST00000331710.9 3256 21 261 68 no_subtype FALSE canonical NA NA 2216 None 69 1 0 FALSE 0 0 NA C coding 729 2187 79 2265 PB.5733.1 chr10 + 3365 1 genic_intron novelGene_316 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.266.89 chr1 - 2027 6 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 63 None 2 13 3 TRUE 0 0 NA C coding 118 354 514 867 PB.6048.7 chr10 - 2555 16 incomplete-splice_match EIF3A ENST00000541549.2 4495 23 13 1927 internal_fragment FALSE canonical NA NA 183 None 2 0 0 FALSE 0 0 NA C coding 807 2421 135 2555 PB.5888.3 chr10 + 3149 14 novel_not_in_catalog PAPSS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1799 None 30 14 0 TRUE 0 0 NA C coding 619 1857 79 1935 PB.10484.1 chr20 - 1906 3 novel_in_catalog HELZ2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 57 None 2 7 0 FALSE 0 0 NA B coding 171 513 894 1406 PB.10484.3 chr20 - 1864 3 novel_not_in_catalog HELZ2 novel NA NA NA NA no_subtype FALSE canonical NA NA 16 None 2 2 0 FALSE 0 0 NA B coding 171 513 853 1365 PB.3945.1 chr6 + 2199 13 full-splice_match SLC29A1 ENST00000427851.6 2171 13 -33 5 no_subtype TRUE canonical NA NA 1470 None 2 8 1 FALSE 0 0 NA A coding 481 1443 137 1579 PB.10920.2 chrX - 2499 8 novel_not_in_catalog CXorf38 novel NA NA NA NA no_subtype TRUE canonical NA NA 223 None 2 9 0 TRUE 0 0 NA B coding 319 957 8 964 PB.10920.1 chrX - 2613 7 novel_not_in_catalog CXorf38 novel NA NA NA NA no_subtype FALSE canonical NA NA 223 None 28 10 0 FALSE 0 0 NA B coding 319 957 8 964 PB.2462.1 chr3 - 3646 12 novel_not_in_catalog ISY1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 150 None 4 20 1 TRUE 0 0 NA C coding 285 855 148 1002 PB.9274.2 chr17 - 2122 10 novel_not_in_catalog RNFT1 novel NA NA NA NA no_subtype TRUE canonical NA NA 141 None 8 9 0 TRUE 0 0 NA B coding 435 1305 86 1390 PB.9274.1 chr17 - 2007 10 novel_not_in_catalog RNFT1 novel NA NA NA NA no_subtype TRUE canonical NA NA 127 None 2 7 0 TRUE 0 0 NA B coding 400 1200 72 1271 PB.7942.2 chr14 + 2691 1 novel_in_catalog MARK3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7942.5 chr14 + 2729 1 novel_in_catalog MARK3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA B coding 118 354 2243 2596 PB.7715.1 chr14 + 1297 6 full-splice_match CGRRF1 ENST00000216420.11 2057 6 55 705 no_subtype FALSE canonical NA NA 755 None 3 2 0 FALSE 0 0 NA A coding 332 996 78 1073 PB.6674.2 chr11 + 2703 6 novel_not_in_catalog ARCN1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1158 None 2 9 0 TRUE 0 0 NA C coding 273 819 158 976 PB.7843.1 chr14 - 3820 2 novel_not_in_catalog CEP128 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1716 None 2 25 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.6913.1 chr12 - 3045 2 genic_intron novelGene_434 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2990 None 7 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6674.1 chr11 + 3865 10 full-splice_match ARCN1 ENST00000264028.4 3845 10 -29 9 no_subtype FALSE canonical NA NA 1570 None 200 13 0 FALSE 0 0 NA C coding 511 1533 125 1657 PB.6674.7 chr11 + 1589 1 incomplete-splice_match ARCN1 ENST00000614498.4 2238 5 643 7 no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9415.1 chr17 + 3060 5 full-splice_match C1QTNF1 ENST00000580454.5 1396 5 -130 -1534 no_subtype FALSE canonical NA NA 816 None 4 9 0 FALSE 0 0 NA C coding 281 843 522 1364 PB.9115.2 chr17 - 1410 11 full-splice_match SMARCE1 ENST00000348513.10 5840 11 666 3764 no_subtype FALSE canonical NA NA 70 None 25 0 0 FALSE 0 0 NA C coding 411 1233 116 1348 PB.315.1 chr1 + 2765 1 novel_in_catalog U3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.161.1 chr1 - 999 5 full-splice_match STMN1 ENST00000455785.6 1504 5 47 458 no_subtype FALSE canonical NA NA 31 None 3 2 1 FALSE 0 0 NA A coding 149 447 94 540 PB.4932.5 chr8 + 6661 4 novel_not_in_catalog LYN novel NA NA NA NA no_subtype TRUE canonical NA NA 4984 None 2 27 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.9445.3 chr17 + 1746 16 novel_not_in_catalog ASPSCR1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1654 None 5 3 0 FALSE 0 0 NA B coding 547 1641 25 1665 PB.522.1 chr1 - 3597 1 antisense novelGene_SLC30A7_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4932.1 chr8 + 2671 11 incomplete-splice_match LYN ENST00000519728.5 2297 13 428 -802 internal_fragment FALSE canonical NA NA 1204 None 2 8 0 FALSE 0 0 NA B coding 423 1269 136 1404 PB.9649.3 chr19 - 2838 7 incomplete-splice_match MKNK2 ENST00000591601.5 3582 13 553 191 5prime_fragment FALSE canonical NA NA 81 None 7 18 0 FALSE 0 0 NA B coding 209 627 252 878 PB.4932.9 chr8 + 7197 5 genic_intron novelGene_544 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 7063 None 2 47 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.8167.1 chr15 + 2507 11 full-splice_match MAP2K1 ENST00000307102.9 3410 11 108 795 no_subtype FALSE canonical NA NA 1491 None 15 5 0 FALSE 0 0 NA A coding 393 1179 424 1602 PB.7089.1 chr12 - 2338 1 full-splice_match RP11-629N8.5 ENST00000623666.1 360 1 -1009 -969 no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9649.4 chr19 - 3122 9 incomplete-splice_match MKNK2 ENST00000591601.5 3582 13 441 19 5prime_fragment FALSE canonical NA NA 14 None 8 21 0 FALSE 0 0 NA B coding 304 912 79 990 PB.9754.1 chr19 + 3183 7 full-splice_match ICAM1 ENST00000264832.7 3252 7 277 -208 no_subtype FALSE canonical NA NA 1474 None 145 9 0 FALSE 0 0 NA C coding 532 1596 49 1644 PB.8996.1 chr17 - 1568 9 novel_not_in_catalog VTN novel NA NA NA NA no_subtype TRUE canonical NA NA 119 None 7 1 0 TRUE 0 0 NA A coding 478 1434 56 1489 PB.141.5 chr1 - 2072 2 full-splice_match CNR2 ENST00000374472.4 5254 2 -54 3236 no_subtype FALSE canonical NA NA 171 None 3 4 0 FALSE 0 0 NA C coding 360 1080 217 1296 PB.141.2 chr1 - 2864 3 novel_not_in_catalog CNR2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 117 None 2 7 0 TRUE 0 0 NA C coding 360 1080 163 1242 PB.6688.1 chr11 + 1976 11 full-splice_match PDZD3 ENST00000355547.9 2252 11 6 270 no_subtype FALSE canonical NA NA 1497 None 2 2 0 FALSE 0 0 NA A coding 505 1515 10 1524 PB.637.1 chr1 - 3162 3 novel_not_in_catalog GJA5 novel NA NA NA NA no_subtype FALSE canonical NA NA 97 None 11 8 0 TRUE 0 0 NA B coding 358 1074 131 1204 PB.10841.8 chr22 - 6403 37 novel_not_in_catalog PLXNB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 94 None 80 14 1 TRUE 0 0 NA B coding 1841 5523 161 5683 PB.5311.1 chr9 + 1608 1 full-splice_match RBPJP2 ENST00000618187.1 1444 1 15 -179 no_subtype FALSE canonical NA NA NA None 18 9 0 FALSE 0 0 NA A coding 169 507 697 1203 PB.420.1 chr1 + 2695 1 novel_in_catalog PDE4B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 23 5 0 FALSE 0 0 NA C coding 85 255 97 351 PB.9629.4 chr19 + 2804 13 novel_not_in_catalog PTBP1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1614 None 2 29 2 TRUE 0 0 NA B coding 289 867 151 1017 PB.7729.1 chr14 - 4089 19 novel_not_in_catalog EXOC5 novel NA NA NA NA no_subtype FALSE canonical NA NA 248 None 27 8 0 TRUE 0 0 NA A coding 708 2124 222 2345 PB.9629.1 chr19 + 3016 15 novel_not_in_catalog PTBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1919 None 71 23 2 TRUE 0 0 NA B coding 531 1593 47 1639 PB.9629.3 chr19 + 3429 8 incomplete-splice_match PTBP1 ENST00000586944.5 4661 12 -13 1245 3prime_fragment FALSE canonical NA NA 800 None 2 26 1 FALSE 0 0 NA B coding 312 936 84 1019 PB.9629.2 chr19 + 3186 16 novel_not_in_catalog PTBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1997 None 143 22 2 TRUE 0 0 NA B coding 557 1671 47 1717 PB.7606.1 chr14 - 2832 8 full-splice_match RAB2B ENST00000397762.5 2928 8 88 8 no_subtype FALSE canonical NA NA 59 None 5 8 0 FALSE 0 0 NA A coding 216 648 14 661 PB.2385.1 chr3 + 3525 10 novel_not_in_catalog QTRT2 novel NA NA NA NA no_subtype TRUE canonical NA NA 2809 None 9 7 1 TRUE 0 0 NA A coding 415 1245 105 1349 PB.9094.2 chr17 + 2824 13 novel_in_catalog STARD3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2163 None 2 13 0 FALSE 0 0 NA C coding 285 855 117 971 PB.9094.1 chr17 + 2066 15 full-splice_match STARD3 ENST00000336308.9 2132 15 46 20 no_subtype TRUE canonical NA NA 1405 None 17 3 0 FALSE 0 0 NA C coding 445 1335 173 1507 PB.2177.3 chr3 - 3640 6 novel_not_in_catalog IP6K2 novel NA NA NA NA no_subtype TRUE canonical NA NA 60 None 2 7 0 FALSE 0 0 NA C coding 418 1254 2125 3378 PB.9341.1 chr17 - 3049 3 novel_not_in_catalog CDC42EP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 107 None 42 13 1 TRUE 0 0 NA A coding 356 1068 220 1287 PB.6276.1 chr11 + 5914 5 full-splice_match TRIM44 ENST00000299413.6 12964 5 92 6958 no_subtype FALSE canonical NA NA 1222 None 11 23 0 FALSE 0 0 NA C coding 344 1032 216 1247 PB.6276.2 chr11 + 2774 2 genic_intron novelGene_350 novel NA NA NA NA no_subtype FALSE canonical NA NA 1332 None 2 11 1 FALSE 0 0 NA A coding 152 456 769 1224 PB.6276.3 chr11 + 3986 1 incomplete-splice_match TRIM44 ENST00000299413.6 12964 5 2021 6958 no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5957.5 chr10 + 3321 3 full-splice_match ZFYVE27 ENST00000477521.5 743 3 -1472 -1106 no_subtype FALSE canonical NA NA 1663 None 2 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1767.1 chr2 - 2873 19 novel_not_in_catalog GTF3C3 novel NA NA NA NA no_subtype FALSE canonical NA NA 141 None 9 2 0 TRUE 0 0 NA A coding 886 2658 40 2697 PB.5922.1 chr10 + 3647 23 novel_not_in_catalog EXOC6 novel NA NA NA NA no_subtype FALSE canonical NA NA 2388 None 2 1 0 TRUE 0 0 NA C coding 799 2397 122 2518 PB.1344.1 chr2 - 2496 28 novel_not_in_catalog PNPT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 175 None 8 2 1 FALSE 0 0 NA A coding 537 1611 15 1625 PB.4662.2 chr7 - 2821 24 full-splice_match COPG2 ENST00000425248.5 3134 24 11 302 no_subtype FALSE canonical NA NA 106 None 39 2 0 FALSE 0 0 NA A coding 871 2613 70 2682 PB.2658.4 chr3 - 2564 3 novel_not_in_catalog BCL6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 258 None 2 16 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.149.8 chr1 - 4257 8 novel_not_in_catalog RUNX3 novel NA NA NA NA no_subtype FALSE canonical NA NA 497 None 2 45 1 TRUE 0 0 NA B coding 429 1287 440 1726 PB.5941.3 chr10 - 2814 17 novel_not_in_catalog PIK3AP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 107 None 4 6 1 FALSE 0 0 NA B coding 595 1785 95 1879 PB.149.6 chr1 - 3585 7 novel_not_in_catalog RUNX3 novel NA NA NA NA no_subtype FALSE canonical NA NA 81 None 4 23 1 TRUE 0 0 NA B coding 306 918 127 1044 PB.149.7 chr1 - 3743 7 novel_not_in_catalog RUNX3 novel NA NA NA NA no_subtype FALSE canonical NA NA 243 None 11 23 2 TRUE 0 0 NA B coding 306 918 289 1206 PB.149.4 chr1 - 3880 8 novel_not_in_catalog RUNX3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 67 None 4 24 1 TRUE 0 0 NA B coding 415 1245 99 1343 PB.8301.4 chr15 + 3159 20 novel_not_in_catalog UNC45A novel NA NA NA NA no_subtype FALSE canonical NA NA 2527 None 10 2 0 TRUE 0 0 NA B coding 799 2397 386 2782 PB.6680.1 chr11 - 3517 2 incomplete-splice_match BCL9L ENST00000526143.2 5514 8 3597 -1600 5prime_fragment FALSE canonical NA NA 154 None 2 10 0 FALSE 0 0 NA A coding 413 1239 7 1245 PB.11184.2 chrX - 2815 1 incomplete-splice_match IDS ENST00000340855.10 7619 9 3022 1783 no_subtype FALSE canonical NA NA NA None 13 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8280.9 chr15 + 2570 10 novel_in_catalog ABHD2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1189 None 2 3 0 FALSE 0 0 NA C coding 425 1275 109 1383 PB.1396.1 chr2 + 1314 13 full-splice_match ANXA4 ENST00000394295.5 2799 13 161 1324 no_subtype FALSE canonical NA NA 993 None 12 0 0 FALSE 0 0 NA A coding 321 963 88 1050 PB.975.1 chr1 - 1653 11 full-splice_match CHIT1 ENST00000367229.5 2246 11 0 593 no_subtype FALSE canonical NA NA 60 None 13 2 0 FALSE 0 0 NA A coding 476 1428 6 1433 PB.8280.1 chr15 + 5658 7 antisense novelGene_HMGB1P8_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3747 None 2 44 4 FALSE 0 0 NA B coding 275 825 2436 3260 PB.4307.2 chr7 + 1818 12 novel_not_in_catalog BZW2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1356 None 2 3 0 TRUE 0 0 NA C coding 419 1257 126 1382 PB.4307.1 chr7 + 1798 12 full-splice_match BZW2 ENST00000258761.7 1860 12 50 12 no_subtype FALSE canonical NA NA 1346 None 36 6 0 FALSE 0 0 NA C coding 419 1257 116 1372 PB.8280.2 chr15 + 2597 10 novel_in_catalog ABHD2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1216 None 3 5 0 FALSE 0 0 NA C coding 425 1275 136 1410 PB.8280.5 chr15 + 2731 11 full-splice_match ABHD2 ENST00000352732.9 8735 11 359 5645 no_subtype FALSE canonical NA NA 1242 None 26 10 1 FALSE 0 0 NA C coding 425 1275 162 1436 PB.10935.1 chrX - 2895 1 incomplete-splice_match SLC9A7 ENST00000616978.4 10024 17 6912 218 no_subtype FALSE canonical NA NA NA None 19 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8280.6 chr15 + 6173 7 novel_not_in_catalog ABHD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 5891 None 17 35 0 TRUE 0 0 NA C coding 241 723 214 936 PB.155.1 chr1 + 1628 1 genic_intron novelGene_246 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 14 0 FALSE 0 0 NA A coding 117 351 1043 1393 PB.3073.2 chr4 + 2615 10 full-splice_match TMEM184C ENST00000296582.7 4178 10 60 1503 no_subtype FALSE canonical NA NA 1565 None 15 10 0 FALSE 0 0 NA C coding 438 1314 515 1828 PB.10118.1 chr19 - 1606 6 novel_not_in_catalog AKT1S1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 17 None 5 2 0 TRUE 0 0 NA A coding 264 792 1 792 PB.5977.4 chr10 + 2970 1 novel_in_catalog LZTS2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4286.1 chr7 - 4486 14 novel_not_in_catalog CYTH3 novel NA NA NA NA no_subtype TRUE canonical NA NA 159 None 6 36 0 TRUE 0 0 NA A coding 399 1197 126 1322 PB.2590.1 chr3 - 5581 28 novel_not_in_catalog PLD1 novel NA NA NA NA no_subtype TRUE canonical NA NA 95 None 2 21 0 TRUE 0 0 NA B coding 1074 3222 127 3348 PB.2177.1 chr3 - 1730 6 novel_in_catalog IP6K2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 63 None 17 2 0 FALSE 0 0 NA C coding 426 1278 191 1468 PB.6982.1 chr12 + 1548 4 full-splice_match ATG101 ENST00000336854.8 1439 4 21 -130 no_subtype FALSE canonical NA NA 709 None 18 3 0 FALSE 0 0 NA A coding 218 654 458 1111 PB.3526.5 chr5 + 3048 11 novel_in_catalog ANKHD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2931 None 21 2 0 FALSE 0 0 NA B coding 715 2145 904 3048 PB.3834.4 chr6 + 2976 23 incomplete-splice_match C4A ENST00000428956.6 5460 41 2465 19 internal_fragment FALSE canonical NA NA 2712 None 3 1 0 FALSE 0 0 NA B coding 904 2712 140 2851 PB.7149.2 chr12 - 1522 6 incomplete-splice_match ATP2B1 ENST00000428670.7 7032 21 -161 5671 internal_fragment FALSE canonical NA NA 397 None 18 4 0 FALSE 0 0 NA B coding 298 894 628 1521 PB.3834.2 chr6 + 5519 40 novel_not_in_catalog C4A novel NA NA NA NA no_subtype FALSE canonical NA NA 5257 None 3 2 1 FALSE 0 0 NA B coding 887 2661 52 2712 PB.3834.1 chr6 + 5408 41 novel_not_in_catalog C4A novel NA NA NA NA no_subtype FALSE canonical NA NA 5144 None 92 0 0 FALSE 0 0 NA B coding 1744 5232 52 5283 PB.7149.1 chr12 - 1524 8 incomplete-splice_match ATP2B1 ENST00000428670.7 7032 21 -5 5513 internal_fragment FALSE canonical NA NA 241 None 5 1 0 FALSE 0 0 NA B coding 351 1053 472 1524 PB.9135.3 chr17 - 2674 25 novel_not_in_catalog STAT3 novel NA NA NA NA no_subtype FALSE canonical NA NA 167 None 9 2 1 TRUE 0 0 NA B coding 543 1629 854 2482 PB.9135.2 chr17 - 3195 25 novel_not_in_catalog STAT3 novel NA NA NA NA no_subtype FALSE canonical NA NA 150 None 4 4 1 TRUE 0 0 NA B coding 543 1629 859 2487 PB.5949.1 chr10 + 2023 4 full-splice_match PGAM1 ENST00000334828.5 1830 4 131 -324 no_subtype FALSE canonical NA NA 612 None 119 10 0 FALSE 0 0 NA A coding 254 762 18 779 PB.1860.1 chr2 + 3498 20 full-splice_match VIL1 ENST00000248444.9 6531 20 34 2999 no_subtype FALSE canonical NA NA 2424 None 27 8 0 FALSE 0 0 NA A coding 827 2481 55 2535 PB.3722.1 chr6 - 1539 3 full-splice_match NRN1 ENST00000244766.6 1624 3 79 6 no_subtype FALSE canonical NA NA 194 None 2 4 0 FALSE 0 0 NA A coding 142 426 140 565 PB.6299.1 chr11 + 2622 12 full-splice_match CREB3L1 ENST00000621158.4 2687 12 29 36 no_subtype FALSE canonical NA NA 1945 None 2 8 0 FALSE 0 0 NA C coding 519 1557 423 1979 PB.4566.5 chr7 + 1411 13 novel_not_in_catalog MUC12 novel NA NA NA NA no_subtype FALSE canonical NA NA 1073 None 7 6 2 TRUE 0 0 NA B coding 305 915 198 1112 PB.10474.1 chr20 + 1382 10 full-splice_match ADRM1 ENST00000253003.6 1478 10 91 5 no_subtype FALSE canonical NA NA 1181 None 88 3 0 FALSE 0 0 NA A coding 407 1221 65 1285 PB.2864.2 chr4 - 1279 4 full-splice_match JCHAIN ENST00000543780.5 1406 4 123 4 no_subtype FALSE canonical NA NA 82 None 243 6 0 FALSE 0 0 NA C coding 159 477 19 495 PB.8027.4 chr15 - 1450 5 full-splice_match ZNF106 ENST00000564754.5 1470 5 0 20 no_subtype FALSE canonical NA NA 144 None 3 0 0 FALSE 0 0 NA C coding 398 1194 255 1448 PB.7959.224 chr14 - 1516 11 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 75 None 2 15 6 TRUE 0 0 NA B coding 196 588 797 1384 PB.8027.1 chr15 - 3357 7 novel_in_catalog ZNF106 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 159 None 41 0 0 FALSE 0 0 NA C coding 1029 3087 270 3356 PB.3153.1 chr4 - 1561 7 full-splice_match PDLIM3 ENST00000284771.6 1672 7 105 6 no_subtype FALSE canonical NA NA 166 None 13 2 0 FALSE 0 0 NA A coding 316 948 74 1021 PB.8383.2 chr16 - 1926 8 full-splice_match RNPS1 ENST00000320225.9 2241 8 298 17 no_subtype FALSE canonical NA NA 60 None 60 3 0 FALSE 0 0 NA C coding 305 915 178 1092 PB.1765.1 chr2 - 1823 1 incomplete-splice_match STK17B ENST00000263955.8 5287 8 3314 151 no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4373.3 chr7 - 3632 16 novel_not_in_catalog AOAH novel NA NA NA NA no_subtype FALSE canonical NA NA 67 None 2 20 1 TRUE 0 0 NA B coding 306 918 278 1195 PB.4373.1 chr7 - 2248 24 novel_not_in_catalog AOAH novel NA NA NA NA no_subtype TRUE canonical NA NA 63 None 3 4 0 TRUE 0 0 NA B coding 575 1725 274 1998 PB.324.1 chr1 + 2455 6 full-splice_match DPH2 ENST00000255108.7 2472 6 15 2 no_subtype FALSE canonical NA NA 1502 None 5 13 0 FALSE 0 0 NA A coding 489 1467 158 1624 PB.4373.4 chr7 - 1722 14 novel_not_in_catalog AOAH novel NA NA NA NA no_subtype FALSE canonical NA NA 180 None 2 0 0 TRUE 0 0 NA B coding 411 1233 391 1623 PB.7155.2 chr12 - 1713 3 novel_not_in_catalog BTG1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 227 None 4 5 0 TRUE 0 0 NA B coding 171 513 251 763 PB.6315.4 chr11 - 3430 14 novel_in_catalog CELF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 149 None 19 9 0 FALSE 0 0 NA B coding 486 1458 160 1617 PB.6315.6 chr11 - 3508 13 novel_in_catalog CELF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 139 None 16 9 0 FALSE 0 0 NA B coding 486 1458 150 1607 PB.6315.7 chr11 - 3398 12 novel_in_catalog CELF1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 140 None 2 9 0 FALSE 0 0 NA B coding 449 1347 151 1497 PB.6315.1 chr11 - 1650 1 incomplete-splice_match CELF1 ENST00000531165.5 3650 16 1985 16 no_subtype FALSE canonical NA NA NA None 40 4 0 FALSE 0 0 NA B coding 110 330 453 782 PB.6315.2 chr11 - 3510 15 novel_not_in_catalog CELF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 171 None 2 14 2 TRUE 0 0 NA B coding 486 1458 232 1689 PB.5441.4 chr9 - 6903 13 full-splice_match PTBP3 ENST00000343327.6 2755 13 -95 -4053 no_subtype FALSE canonical NA NA 204 None 4 46 0 FALSE 0 0 NA C coding 443 1329 329 1657 PB.9526.1 chr18 + 1443 5 novel_in_catalog RNF125 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 543 None 4 2 0 FALSE 0 0 NA A coding 196 588 40 627 PB.4750.1 chr7 + 4040 26 incomplete-splice_match NOS3 ENST00000297494.7 4388 27 338 10 internal_fragment TRUE canonical NA NA 3469 None 5 7 0 FALSE 0 0 NA A coding 1203 3609 20 3628 PB.6723.1 chr11 + 2872 3 genic_intron novelGene_1093 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 697 None 3 13 2 FALSE 0 0 NA A coding 182 546 809 1354 PB.7243.3 chr12 - 1605 2 full-splice_match C12orf76 ENST00000546627.1 461 2 -12 -1132 no_subtype FALSE canonical NA NA 172 None 2 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7243.2 chr12 - 1419 2 incomplete-splice_match C12orf76 ENST00000549724.1 1302 3 599 -716 5prime_fragment FALSE canonical NA NA 138 None 5 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.462.4 chr1 + 3077 14 novel_not_in_catalog CLCA4 novel NA NA NA NA no_subtype FALSE canonical NA NA 2273 None 5 5 0 FALSE 0 0 NA C coding 868 2604 71 2674 PB.462.2 chr1 + 1606 1 novel_in_catalog CLCA4 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 7 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.462.3 chr1 + 2990 3 novel_in_catalog CLCA4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 342 None 4 12 0 FALSE 0 0 NA C coding 154 462 43 504 PB.462.1 chr1 + 2983 14 full-splice_match CLCA4 ENST00000370563.3 3211 14 1 227 no_subtype FALSE canonical NA NA 2397 None 398 3 0 FALSE 0 0 NA C coding 919 2757 42 2798 PB.3518.1 chr5 + 1773 7 full-splice_match UBE2D2 ENST00000398733.7 2702 7 184 745 no_subtype FALSE canonical NA NA 840 None 6 3 0 FALSE 0 0 NA C coding 147 441 443 883 PB.7865.1 chr14 - 2863 12 novel_not_in_catalog TRIP11 novel NA NA NA NA no_subtype FALSE canonical NA NA 114 None 2 7 1 TRUE 0 0 NA B coding 837 2511 352 2862 PB.7342.1 chr12 - 2991 13 novel_not_in_catalog ZCCHC8 novel NA NA NA NA no_subtype TRUE canonical NA NA 346 None 2 5 0 TRUE 0 0 NA B coding 464 1392 992 2383 PB.10454.1 chr20 + 2487 3 full-splice_match FAM210B ENST00000371384.3 3046 3 223 336 no_subtype FALSE canonical NA NA 230 None 14 17 0 FALSE 0 0 NA A coding 76 228 217 444 PB.7342.6 chr12 - 2475 3 incomplete-splice_match RSRC2 ENST00000527796.6 3156 5 39 642 internal_fragment FALSE canonical NA NA 101 None 2 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7342.5 chr12 - 1900 10 full-splice_match RSRC2 ENST00000331738.11 3520 10 17 1603 no_subtype FALSE canonical NA NA 135 None 19 0 0 FALSE 0 0 NA C coding 434 1302 130 1431 PB.8313.1 chr15 + 2946 2 genic_intron novelGene_858 novel NA NA NA NA no_subtype FALSE canonical NA NA 2177 None 20 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4034.1 chr6 - 2890 3 genic_intron novelGene_821 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2580 None 5 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7959.109 chr14 - 1497 6 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 3 11 2 TRUE 0 0 NA B coding 266 798 11 808 PB.1739.1 chr2 + 3296 13 novel_not_in_catalog GULP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1320 None 3 9 0 TRUE 0 0 NA A coding 304 912 475 1386 PB.1961.8 chr2 - 4364 29 novel_not_in_catalog HDLBP novel NA NA NA NA no_subtype FALSE canonical NA NA 76 None 33 5 0 TRUE 0 0 NA B coding 1268 3804 179 3982 PB.36.1 chr1 - 3207 16 full-splice_match DNAJC11 ENST00000377577.9 3311 16 95 9 no_subtype FALSE canonical NA NA 101 None 36 12 0 FALSE 0 0 NA A coding 559 1677 30 1706 PB.10821.2 chr22 - 2742 10 novel_not_in_catalog KIAA0930 novel NA NA NA NA no_subtype FALSE canonical NA NA 417 None 5 8 1 TRUE 0 0 NA A coding 413 1239 175 1413 PB.1961.4 chr2 - 4410 29 novel_not_in_catalog HDLBP novel NA NA NA NA no_subtype FALSE canonical NA NA 129 None 28 6 0 TRUE 0 0 NA B coding 1268 3804 232 4035 PB.10537.1 chr21 - 1569 9 novel_not_in_catalog TMEM50B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 107 None 2 7 1 TRUE 0 0 NA A coding 158 474 149 622 PB.3419.1 chr5 + 1840 11 full-splice_match DCP2 ENST00000389063.2 8947 11 51 7056 no_subtype TRUE canonical NA NA 1246 None 4 2 0 FALSE 0 0 NA C coding 420 1260 148 1407 PB.3419.2 chr5 + 1630 2 novel_not_in_catalog DCP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 19 None 2 26 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.1961.1 chr2 - 4385 29 novel_not_in_catalog HDLBP novel NA NA NA NA no_subtype FALSE canonical NA NA 101 None 29 5 0 TRUE 0 0 NA B coding 1268 3804 204 4007 PB.2859.5 chr4 - 2733 1 novel_in_catalog YTHDC1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2859.4 chr4 - 2414 17 full-splice_match YTHDC1 ENST00000344157.8 6232 17 32 3786 no_subtype FALSE canonical NA NA 332 None 14 6 0 FALSE 0 0 NA C coding 703 2109 305 2413 PB.2859.2 chr4 - 3220 17 full-splice_match YTHDC1 ENST00000579690.5 2983 17 -239 2 no_subtype FALSE canonical NA NA 267 None 2 12 1 FALSE 0 0 NA C coding 735 2205 240 2444 PB.9633.1 chr19 - 1773 8 full-splice_match R3HDM4 ENST00000361574.9 1815 8 37 5 no_subtype FALSE canonical NA NA 108 None 141 9 0 FALSE 0 0 NA C coding 268 804 38 841 PB.6056.1 chr10 + 5578 5 novel_not_in_catalog INPP5F novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5469 None 2 42 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.9635.2 chr19 - 2763 10 novel_not_in_catalog TMEM259 novel NA NA NA NA no_subtype FALSE canonical NA NA 155 None 2 13 0 FALSE 0 0 NA B coding 354 1062 1003 2064 PB.3864.1 chr6 - 1521 6 novel_not_in_catalog TAF11 novel NA NA NA NA no_subtype FALSE canonical NA NA 263 None 17 5 1 TRUE 0 0 NA A coding 211 633 93 725 PB.9983.1 chr19 + 3789 13 novel_in_catalog SAMD4B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2395 None 2 6 0 FALSE 0 0 NA B coding 694 2082 340 2421 PB.4704.1 chr7 + 2607 10 full-splice_match LUC7L2 ENST00000354926.8 2645 10 33 5 no_subtype FALSE canonical NA NA 1322 None 33 13 0 FALSE 0 0 NA C coding 392 1176 322 1497 PB.4704.2 chr7 + 3424 9 novel_in_catalog LUC7L2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1131 None 22 14 0 FALSE 0 0 NA C coding 335 1005 323 1327 PB.11180.2 chrX - 1326 1 incomplete-splice_match ATP11C ENST00000433868.5 3113 6 1781 7 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.882.1 chr1 + 1328 1 genic_intron novelGene_1334 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2040.1 chr3 + 3845 1 genic_intron novelGene_153 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A coding 111 333 146 478 PB.6662.4 chr11 - 2805 10 novel_not_in_catalog JAML novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 4 7 0 TRUE 0 0 NA B coding 344 1032 92 1123 PB.8750.1 chr16 - 2661 7 full-splice_match TMEM231 ENST00000258173.10 4278 7 48 1569 no_subtype FALSE canonical NA NA 168 None 8 9 0 FALSE 0 0 NA A coding 316 948 30 977 PB.7893.1 chr14 - 2153 6 incomplete-splice_match CLMN ENST00000298912.8 12747 13 509 10085 internal_fragment TRUE canonical NA NA 22 None 2 1 0 FALSE 0 0 NA B coding 615 1845 308 2152 PB.10178.1 chr19 - 3030 5 full-splice_match ZNF582 ENST00000586929.5 2053 5 35 -1012 no_subtype FALSE canonical NA NA 291 None 2 5 0 FALSE 0 0 NA A coding 548 1644 279 1922 PB.1530.2 chr2 - 1549 7 full-splice_match FHL2 ENST00000344213.8 1769 7 195 25 no_subtype FALSE canonical NA NA 188 None 17 0 0 FALSE 0 0 NA C coding 279 837 264 1100 PB.6733.2 chr11 - 5199 8 full-splice_match ETS1 ENST00000319397.6 2231 8 27 -2995 no_subtype FALSE canonical NA NA 365 None 2 27 0 FALSE 0 0 NA C coding 441 1323 284 1606 PB.6844.2 chr12 + 2753 1 genic_intron novelGene_119 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2743.1 chr4 - 2936 19 novel_not_in_catalog ACOX3 novel NA NA NA NA no_subtype FALSE canonical NA NA 145 None 9 7 0 TRUE 0 0 NA B coding 700 2100 160 2259 PB.10815.1 chr22 + 1625 15 full-splice_match SAMM50 ENST00000350028.4 1717 15 84 8 no_subtype TRUE canonical NA NA 1437 None 50 0 0 FALSE 0 0 NA A coding 469 1407 74 1480 PB.4298.1 chr7 - 2822 2 novel_not_in_catalog NDUFA4 novel NA NA NA NA no_subtype FALSE canonical NA NA 368 None 4 15 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.750.2 chr1 + 1664 8 novel_not_in_catalog RRNAD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1355 None 2 6 1 TRUE 0 0 NA B coding 459 1377 98 1474 PB.202.3 chr1 + 3293 11 novel_not_in_catalog SESN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1521 None 2 14 1 TRUE 0 0 NA C coding 348 1044 562 1605 PB.3324.1 chr5 + 858 6 full-splice_match BTF3 ENST00000335895.12 897 6 35 4 no_subtype FALSE canonical NA NA 558 None 7 0 0 FALSE 0 0 NA A coding 162 486 117 602 PB.202.1 chr1 + 3453 12 novel_not_in_catalog SESN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1681 None 48 9 0 TRUE 0 0 NA C coding 480 1440 326 1765 PB.10358.1 chr20 - 3424 1 genic_intron novelGene_356 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.202.4 chr1 + 3264 11 novel_not_in_catalog SESN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1492 None 2 10 0 TRUE 0 0 NA C coding 414 1242 335 1576 PB.202.5 chr1 + 3452 10 full-splice_match SESN2 ENST00000253063.3 3453 10 -3 4 no_subtype FALSE canonical NA NA 1680 None 2 12 2 FALSE 0 0 NA C coding 480 1440 325 1764 PB.7926.2 chr14 + 3565 13 full-splice_match PPP2R5C ENST00000350249.7 3845 13 67 213 no_subtype FALSE canonical NA NA 1399 None 7 6 0 FALSE 0 0 NA C coding 485 1455 74 1528 PB.5662.1 chr10 - 1352 8 full-splice_match IL2RA ENST00000379959.7 3176 8 -44 1868 no_subtype TRUE canonical NA NA 282 None 15 1 0 FALSE 0 0 NA A coding 272 816 219 1034 PB.8446.1 chr16 - 2397 4 full-splice_match CPPED1 ENST00000381774.8 6273 4 178 3698 no_subtype FALSE canonical NA NA 133 None 12 10 0 FALSE 0 0 NA A coding 314 942 64 1005 PB.1642.1 chr2 + 1421 6 full-splice_match TNFAIP6 ENST00000243347.4 1424 6 0 3 no_subtype FALSE canonical NA NA 739 None 16 5 0 FALSE 0 0 NA A coding 277 831 76 906 PB.8446.3 chr16 + 3194 6 antisense novelGene_CPPED1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3019 None 5 15 2 FALSE 0 0 NA A coding 116 348 1851 2198 PB.2891.2 chr4 - 3765 3 genic_intron novelGene_720 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2205 None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10707.5 chr22 + 3134 20 novel_not_in_catalog LIMK2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2952 None 36 5 0 TRUE 0 0 NA C coding 638 1914 140 2053 PB.7959.32 chr14 - 1476 8 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 14 3 TRUE 0 0 NA B coding 251 753 674 1426 PB.10707.7 chr22 + 2251 16 full-splice_match LIMK2 ENST00000331728.8 3670 16 7 1412 no_subtype FALSE canonical NA NA 1879 None 2 4 0 FALSE 0 0 NA C coding 638 1914 108 2021 PB.4430.1 chr7 + 2195 2 antisense novelGene_RP11-416N13.1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1423 None 2 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10707.1 chr22 + 3142 8 novel_not_in_catalog RNF185 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1094 None 4 13 1 TRUE 0 0 NA C coding 192 576 167 742 PB.2851.2 chr4 + 1669 17 incomplete-splice_match SRP72 ENST00000342756.9 3983 19 704 1610 3prime_fragment FALSE canonical NA NA 1657 None 17 0 0 FALSE 0 0 NA B coding 550 1650 18 1667 PB.10707.3 chr22 + 3049 6 novel_in_catalog RNF185 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 531 None 2 10 0 FALSE 0 0 NA C coding 192 576 51 626 PB.10707.2 chr22 + 3129 7 full-splice_match RNF185 ENST00000326132.10 3171 7 35 7 no_subtype FALSE canonical NA NA 605 None 68 11 0 FALSE 0 0 NA C coding 192 576 125 700 PB.8569.1 chr16 - 2612 3 full-splice_match ZNF668 ENST00000300849.4 2762 3 146 4 no_subtype FALSE canonical NA NA 516 None 5 1 0 FALSE 0 0 NA A coding 619 1857 539 2395 PB.5441.8 chr9 - 6601 14 novel_in_catalog PTBP3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 106 None 11 34 0 FALSE 0 0 NA C coding 521 1563 158 1720 PB.52.1 chr1 - 2961 7 novel_not_in_catalog DFFA novel NA NA NA NA no_subtype FALSE canonical NA NA 203 None 2 14 1 TRUE 0 0 NA C coding 268 804 68 871 PB.52.2 chr1 - 1582 7 novel_not_in_catalog DFFA novel NA NA NA NA no_subtype FALSE canonical NA NA 175 None 2 6 1 TRUE 0 0 NA C coding 331 993 40 1032 PB.52.3 chr1 - 2949 6 novel_not_in_catalog DFFA novel NA NA NA NA no_subtype FALSE canonical NA NA 187 None 4 14 1 TRUE 0 0 NA C coding 268 804 52 855 PB.2450.10 chr3 + 1548 9 novel_not_in_catalog ABTB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 904 None 2 2 0 TRUE 0 0 NA C coding 364 1092 17 1108 PB.605.1 chr1 + 3882 11 novel_not_in_catalog CD101 novel NA NA NA NA no_subtype FALSE canonical NA NA 3116 None 2 11 0 TRUE 0 0 NA A coding 1021 3063 41 3103 PB.5212.1 chr9 + 4084 27 novel_not_in_catalog JAK2 novel NA NA NA NA no_subtype TRUE canonical NA NA 3710 None 3 2 0 TRUE 0 0 NA A coding 1130 3390 426 3815 PB.6114.1 chr11 + 1412 5 full-splice_match TMEM80 ENST00000397510.7 1094 5 389 -707 no_subtype FALSE canonical NA NA 237 None 2 6 0 FALSE 0 0 NA A coding 143 429 12 440 PB.5133.2 chr8 - 3020 17 novel_not_in_catalog NDRG1 novel NA NA NA NA no_subtype TRUE canonical NA NA 119 None 54 3 0 TRUE 0 0 NA A coding 394 1182 138 1319 PB.5645.1 chr9 + 2739 5 novel_not_in_catalog EHMT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2534 None 2 24 1 TRUE 0 0 NA A coding 285 855 17 871 PB.8035.1 chr15 + 2663 14 full-splice_match TMEM62 ENST00000260403.6 2771 14 95 13 no_subtype TRUE canonical NA NA 1789 None 3 10 0 FALSE 0 0 NA A coding 643 1929 185 2113 PB.4407.1 chr7 + 4165 22 novel_in_catalog OGDH novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2982 None 90 6 0 FALSE 0 0 NA B coding 1023 3069 32 3100 PB.4407.2 chr7 + 4081 23 novel_not_in_catalog OGDH novel NA NA NA NA no_subtype FALSE canonical NA NA 2970 None 23 4 0 TRUE 0 0 NA B coding 1019 3057 32 3088 PB.4407.3 chr7 + 4067 25 novel_not_in_catalog OGDH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2954 None 2 14 4 TRUE 0 0 NA B coding 812 2436 637 3072 PB.1836.2 chr2 - 1720 10 full-splice_match LANCL1 ENST00000450366.6 4602 10 38 2844 no_subtype FALSE canonical NA NA 110 None 3 0 0 FALSE 0 0 NA C coding 399 1197 127 1323 PB.3492.1 chr5 + 3019 3 full-splice_match C5orf24 ENST00000504727.1 2923 3 -95 -1 no_subtype FALSE canonical NA NA 642 None 3 18 0 FALSE 0 0 NA A coding 155 465 216 680 PB.4181.2 chr6 - 2701 1 antisense novelGene_UTRN_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9260.1 chr17 - 1910 18 full-splice_match MKS1 ENST00000393119.6 2397 18 59 428 no_subtype TRUE canonical NA NA 96 None 2 0 0 FALSE 0 0 NA A coding 559 1677 17 1693 PB.4840.1 chr8 + 2031 14 full-splice_match ADAMDEC1 ENST00000256412.8 2348 14 220 97 no_subtype FALSE canonical NA NA 1406 None 101 4 0 FALSE 0 0 NA A coding 470 1410 1 1410 PB.9818.2 chr19 + 964 1 full-splice_match EEF1DP1 ENST00000585891.1 896 1 -2 -66 no_subtype FALSE canonical NA NA NA None 5 3 0 FALSE 0 0 NA C coding 280 840 59 898 PB.9818.1 chr19 + 905 2 genic EEF1DP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 190 None 13 6 1 FALSE 0 0 NA C coding 146 438 402 839 PB.10085.1 chr19 + 1491 13 full-splice_match GLTSCR2 ENST00000246802.9 1528 13 34 3 no_subtype FALSE canonical NA NA 1434 None 82 2 0 FALSE 0 0 NA A coding 478 1434 5 1438 PB.5586.2 chr9 + 6005 2 genic_intron novelGene_1137 novel NA NA NA NA no_subtype FALSE canonical NA NA 4436 None 3 41 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1265.1 chr2 + 3525 16 incomplete-splice_match BIRC6 ENST00000421745.6 15703 74 8273 3905 internal_fragment FALSE canonical NA NA 3484 None 2 0 0 FALSE 0 0 NA B coding 1160 3480 46 3525 PB.5659.5 chr10 - 3429 3 novel_not_in_catalog GDI2 novel NA NA NA NA no_subtype TRUE canonical NA NA 170 None 4 35 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.8673.1 chr16 + 1546 5 novel_not_in_catalog HSD11B2 novel NA NA NA NA no_subtype FALSE canonical NA NA 585 None 2 3 0 FALSE 0 0 NA A coding 301 903 96 998 PB.1265.2 chr2 + 3843 19 incomplete-splice_match BIRC6 ENST00000421745.6 15703 74 11551 309 internal_fragment FALSE canonical NA NA 2977 None 2 2 0 FALSE 0 0 NA B coding 1042 3126 29 3154 PB.5820.6 chr10 - 1848 1 incomplete-splice_match SAR1A ENST00000373241.8 2996 7 1136 13 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5820.7 chr10 - 2911 8 novel_not_in_catalog SAR1A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 25 None 10 13 0 TRUE 0 0 NA C coding 198 594 59 652 PB.5659.2 chr10 - 2285 11 full-splice_match GDI2 ENST00000380191.8 2412 11 117 10 no_subtype FALSE canonical NA NA 219 None 45 9 0 FALSE 0 0 NA C coding 445 1335 175 1509 PB.5659.3 chr10 - 2868 10 novel_in_catalog GDI2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 218 None 2 13 0 FALSE 0 0 NA C coding 196 588 1499 2086 PB.2582.1 chr3 + 3713 2 genic_intron novelGene_1309 novel NA NA NA NA no_subtype TRUE canonical NA NA 3649 None 2 29 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7869.1 chr14 + 3667 7 full-splice_match SLC24A4 ENST00000526482.1 4747 7 1079 1 no_subtype FALSE canonical NA NA 891 None 2 12 0 FALSE 0 0 NA C coding 316 948 94 1041 PB.904.1 chr1 - 3691 7 full-splice_match RNASEL ENST00000367559.7 4238 7 0 547 no_subtype FALSE canonical NA NA 90 None 13 10 0 FALSE 0 0 NA A coding 741 2223 255 2477 PB.927.1 chr1 + 3037 14 novel_in_catalog HMCN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1613 None 2 12 0 FALSE 0 0 NA A coding 596 1788 190 1977 PB.7608.5 chr14 + 1494 9 fusion TRAV12-1,TRAC novel NA NA NA NA no_subtype TRUE non_canonical NA NA 948 None 2 7 2 TRUE 0 0 NA A coding 125 375 161 535 PB.7608.6 chr14 + 1524 9 fusion TRAV8-2,TRAC novel NA NA NA NA no_subtype TRUE non_canonical NA NA 981 None 3 8 3 TRUE 0 0 NA A coding 106 318 212 529 PB.7608.7 chr14 + 1377 9 fusion TRAV13-1,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 826 None 2 4 3 TRUE 0 0 NA B coding 253 759 64 822 PB.9838.1 chr19 + 3676 2 antisense novelGene_AKAP8L_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 604 None 5 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7608.1 chr14 + 1377 7 fusion TRAV4,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 829 None 2 8 2 TRUE 0 0 NA B coding 129 387 50 436 PB.3319.1 chr5 - 6265 5 full-splice_match ZNF366 ENST00000318442.5 3830 5 308 -2743 no_subtype FALSE canonical NA NA 169 None 2 35 1 FALSE 0 0 NA A coding 744 2232 184 2415 PB.7608.3 chr14 + 1351 8 fusion TRAV4,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 808 None 2 8 3 TRUE 0 0 NA B coding 262 786 19 804 PB.2418.2 chr3 + 2663 2 genic_intron novelGene_1062 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 232 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4079.2 chr6 - 3639 25 novel_not_in_catalog MICAL1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 232 None 21 7 1 TRUE 0 0 NA B coding 1070 3210 306 3515 PB.4079.1 chr6 - 3610 25 novel_not_in_catalog MICAL1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 232 None 24 7 1 TRUE 0 0 NA B coding 1070 3210 276 3485 PB.7938.1 chr14 + 1530 12 full-splice_match AMN ENST00000299155.9 1907 12 25 352 no_subtype FALSE canonical NA NA 1265 None 5 3 1 FALSE 0 0 NA A coding 453 1359 9 1367 PB.7608.8 chr14 + 1398 10 fusion TRAV13-1,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 850 None 4 5 4 TRUE 0 0 NA B coding 261 783 64 846 PB.7608.9 chr14 + 1386 7 fusion TRAC,TRAV12-2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 838 None 2 6 2 TRUE 0 0 NA A coding 131 393 53 445 PB.903.6 chr1 - 1783 1 incomplete-splice_match GLUL ENST00000339526.8 3942 7 2147 13 no_subtype FALSE canonical NA NA NA None 4 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.903.7 chr1 - 5667 7 novel_not_in_catalog GLUL novel NA NA NA NA no_subtype FALSE canonical NA NA 1413 None 8 29 1 TRUE 0 0 NA C coding 373 1119 3044 4162 PB.5327.1 chr9 + 1237 10 full-splice_match OSTF1 ENST00000346234.6 1319 10 7 75 no_subtype FALSE canonical NA NA 729 None 23 6 0 FALSE 0 0 NA C coding 214 642 144 785 PB.2430.1 chr3 + 3784 3 genic DIRC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2954 None 2 25 2 TRUE 0 0 NA A coding 116 348 71 418 PB.1161.1 chr1 + 1461 12 full-splice_match SCCPDH ENST00000366510.3 2503 12 365 677 no_subtype FALSE canonical NA NA 1195 None 14 1 0 FALSE 0 0 NA C coding 429 1287 12 1298 PB.844.8 chr1 + 1938 1 incomplete-splice_match MPZL1 ENST00000392121.7 3421 3 1481 3 no_subtype FALSE canonical NA NA NA None 12 11 0 FALSE 0 0 NA C coding 147 441 1364 1804 PB.8029.1 chr15 - 2663 1 antisense novelGene_SNAP23_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9617.1 chr18 + 2668 8 full-splice_match NFATC1 ENST00000592223.5 2531 8 33 -170 no_subtype FALSE canonical NA NA 1946 None 15 3 0 FALSE 0 0 NA A coding 703 2109 27 2135 PB.5123.8 chr8 - 2988 1 novel_in_catalog FAM49B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 26 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5857.1 chr10 + 5893 1 genic_intron novelGene_701 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3186.1 chr5 - 4085 2 genic_intron novelGene_142 novel NA NA NA NA no_subtype FALSE canonical NA NA 118 None 2 37 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5123.4 chr8 - 2023 14 novel_in_catalog FAM49B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 191 None 4 5 1 FALSE 0 0 NA C coding 324 972 381 1352 PB.4718.12 chr7 + 2751 5 antisense novelGene_KIAA1147_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2655 None 5 11 0 FALSE 0 0 NA B coding 111 333 1049 1381 PB.10860.1 chrX + 969 1 incomplete-splice_match WWC3 ENST00000380861.8 6647 23 5667 12 no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA A coding 169 507 296 802 PB.4423.1 chr7 - 2861 7 novel_not_in_catalog VOPP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 157 None 5 11 0 TRUE 0 0 NA A coding 172 516 104 619 PB.5651.1 chr10 + 4520 14 novel_not_in_catalog WDR37 novel NA NA NA NA no_subtype FALSE canonical NA NA 1580 None 2 17 0 FALSE 0 0 NA A coding 454 1362 348 1709 PB.5123.2 chr8 - 3711 13 novel_not_in_catalog FAM49B novel NA NA NA NA no_subtype FALSE canonical NA NA 148 None 2 13 0 TRUE 0 0 NA C coding 324 972 198 1169 PB.4464.2 chr7 - 5437 31 novel_not_in_catalog HIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 65 None 6 11 0 TRUE 0 0 NA A coding 914 2742 251 2992 PB.8823.2 chr17 - 3500 2 full-splice_match GEMIN4 ENST00000319004.5 3748 2 35 213 no_subtype FALSE canonical NA NA 94 None 25 2 0 FALSE 0 0 NA A coding 1058 3174 85 3258 PB.3854.1 chr6 + 3883 23 incomplete-splice_match ITPR3 ENST00000605930.2 9029 58 5145 1 internal_fragment FALSE canonical NA NA 3026 None 2 4 0 FALSE 0 0 NA A coding 1017 3051 42 3092 PB.621.1 chr1 - 1616 9 full-splice_match RNF115 ENST00000582693.4 9117 9 -55 7556 no_subtype FALSE canonical NA NA 361 None 5 2 0 FALSE 0 0 NA C coding 304 912 260 1171 PB.2905.3 chr4 - 3686 19 novel_not_in_catalog ANTXR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 78 None 2 9 1 TRUE 0 0 NA B coding 488 1464 365 1828 PB.2905.2 chr4 - 3304 18 novel_not_in_catalog ANTXR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 134 None 6 5 0 TRUE 0 0 NA B coding 411 1233 214 1446 PB.2905.5 chr4 - 3509 19 novel_not_in_catalog ANTXR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 38 None 18 4 0 TRUE 0 0 NA B coding 488 1464 190 1653 PB.2905.4 chr4 - 3420 18 novel_not_in_catalog ANTXR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 250 None 3 9 0 TRUE 0 0 NA B coding 411 1233 330 1562 PB.3647.1 chr5 + 3477 1 incomplete-splice_match NEURL1B ENST00000369800.5 6424 5 2934 14 no_subtype FALSE canonical NA NA NA None 2 33 0 FALSE 0 0 NA A coding 105 315 814 1128 PB.2983.2 chr4 + 2945 2 genic_intron novelGene_936 novel NA NA NA NA no_subtype FALSE canonical NA NA 1776 None 2 29 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8272.18 chr15 + 2950 21 novel_not_in_catalog AKAP13 novel NA NA NA NA no_subtype FALSE canonical NA NA 2680 None 3 2 1 FALSE 0 0 NA B coding 966 2898 53 2950 PB.11191.2 chrX - 3061 9 novel_not_in_catalog GABRE novel NA NA NA NA no_subtype FALSE canonical NA NA 122 None 2 9 0 FALSE 0 0 NA B coding 124 372 743 1114 PB.2231.1 chr3 + 3069 11 novel_not_in_catalog ALAS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2804 None 16 8 1 TRUE 0 0 NA B coding 315 945 2018 2962 PB.3663.1 chr5 + 3021 9 novel_not_in_catalog TSPAN17 novel NA NA NA NA no_subtype TRUE canonical NA NA 865 None 2 17 0 TRUE 0 0 NA A coding 270 810 119 928 PB.8272.11 chr15 + 6320 2 genic_intron novelGene_775 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1008 None 3 33 1 FALSE 0 0 NA B coding 134 402 4476 4877 PB.8272.12 chr15 + 1972 1 novel_in_catalog AKAP13 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1271.1 chr2 + 2956 4 incomplete-splice_match CRIM1 ENST00000280527.6 5912 17 2861 95 internal_fragment FALSE canonical NA NA 440 None 3 19 0 FALSE 0 0 NA A coding 165 495 120 614 PB.8272.16 chr15 + 3130 22 novel_not_in_catalog AKAP13 novel NA NA NA NA no_subtype FALSE canonical NA NA 2860 None 65 2 1 FALSE 0 0 NA B coding 1036 3108 23 3130 PB.8272.17 chr15 + 1714 9 novel_not_in_catalog AKAP13 novel NA NA NA NA no_subtype FALSE canonical NA NA 877 None 4 6 2 FALSE 0 0 NA B coding 387 1161 94 1254 PB.8844.2 chr17 - 4063 19 novel_not_in_catalog CLUH novel NA NA NA NA no_subtype TRUE non_canonical NA NA 96 None 3 16 1 TRUE 0 0 NA B coding 913 2739 136 2874 PB.8844.1 chr17 - 5313 28 novel_not_in_catalog CLUH novel NA NA NA NA no_subtype TRUE non_canonical NA NA 192 None 4 13 2 TRUE 0 0 NA B coding 1348 4044 93 4136 PB.1709.1 chr2 - 4724 8 incomplete-splice_match WIPF1 ENST00000392546.6 2180 9 91 -2635 5prime_fragment FALSE canonical NA NA 203 None 2 22 0 FALSE 0 0 NA C coding 503 1509 242 1750 PB.7761.2 chr14 - 2666 1 novel_in_catalog GPX2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10320.1 chr20 - 2930 1 genic_intron novelGene_317 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7761.1 chr14 - 922 2 full-splice_match GPX2 ENST00000389614.5 990 2 72 -4 no_subtype FALSE canonical NA NA 237 None 2 1 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.844.6 chr1 + 3458 1 genic_intron novelGene_1292 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10572.5 chr21 + 2679 14 novel_in_catalog MX2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2015 None 2 4 0 FALSE 0 0 NA C coding 715 2145 111 2255 PB.9368.1 chr17 + 1913 11 full-splice_match TSEN54 ENST00000333213.10 1944 11 28 3 no_subtype FALSE canonical NA NA 1438 None 10 2 0 FALSE 0 0 NA C coding 526 1578 9 1586 PB.9023.2 chr17 + 1871 1 genic_intron novelGene_283 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10715.1 chr22 + 1621 2 full-splice_match YWHAH ENST00000248975.5 1825 2 200 4 no_subtype FALSE canonical NA NA 160 None 18 2 0 FALSE 0 0 NA C coding 246 738 74 811 PB.10715.2 chr22 + 1688 3 novel_not_in_catalog YWHAH novel NA NA NA NA no_subtype FALSE canonical NA NA 227 None 13 4 0 TRUE 0 0 NA C coding 246 738 141 878 PB.1953.1 chr2 - 417 3 full-splice_match COPS9 ENST00000607357.1 418 3 0 1 no_subtype FALSE canonical NA NA 82 None 2 1 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2928.2 chr4 - 5959 29 novel_not_in_catalog WDFY3 novel NA NA NA NA no_subtype FALSE canonical NA NA 70 None 2 5 0 TRUE 0 0 NA A coding 1336 4008 16 4023 PB.4752.2 chr7 + 3878 22 full-splice_match SLC4A2 ENST00000392826.6 3947 22 65 4 no_subtype FALSE canonical NA NA 3646 None 2 4 0 FALSE 0 0 NA C coding 1232 3696 29 3724 PB.9368.3 chr17 + 1806 8 novel_in_catalog TSEN54 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 639 None 2 2 0 FALSE 0 0 NA C coding 485 1455 17 1471 PB.4005.1 chr6 + 3093 23 novel_not_in_catalog TTK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2692 None 4 4 0 FALSE 0 0 NA A coding 857 2571 203 2773 PB.9368.2 chr17 + 2822 10 novel_in_catalog TSEN54 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2371 None 6 13 0 FALSE 0 0 NA C coding 485 1455 1 1455 PB.4761.1 chr7 + 2607 14 novel_not_in_catalog GALNT11 novel NA NA NA NA no_subtype FALSE canonical NA NA 2176 None 19 11 1 TRUE 0 0 NA B coding 608 1824 145 1968 PB.7227.1 chr12 + 2501 5 novel_not_in_catalog ISCU novel NA NA NA NA no_subtype FALSE canonical NA NA 1970 None 2 16 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.774.9 chr1 - 3910 3 novel_not_in_catalog AIM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 135 None 16 25 1 TRUE 0 0 NA C coding 125 375 156 530 PB.898.1 chr1 + 3297 12 full-splice_match QSOX1 ENST00000367602.7 9311 12 15 5999 no_subtype FALSE canonical NA NA 1527 None 30 6 0 FALSE 0 0 NA C coding 747 2241 60 2300 PB.3079.1 chr4 - 2873 2 genic_intron novelGene_1235 novel NA NA NA NA no_subtype FALSE canonical NA NA 148 None 4 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9368.4 chr17 + 3165 10 novel_not_in_catalog TSEN54 novel NA NA NA NA no_subtype FALSE canonical NA NA 2693 None 2 11 0 TRUE 0 0 NA C coding 485 1455 14 1468 PB.8541.1 chr16 + 1446 4 novel_not_in_catalog PAGR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1352 None 22 4 1 TRUE 0 0 NA A coding 254 762 393 1154 PB.5882.1 chr10 + 3544 11 novel_not_in_catalog CCSER2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2584 None 2 3 0 TRUE 0 0 NA B coding 1047 3141 260 3400 PB.1475.1 chr2 - 1475 12 full-splice_match MRPS5 ENST00000272418.6 1652 12 174 3 no_subtype FALSE canonical NA NA 93 None 44 3 0 FALSE 0 0 NA A coding 430 1290 36 1325 PB.1880.2 chr2 + 1542 13 novel_in_catalog GMPPA novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1253 None 11 0 0 FALSE 0 0 NA B coding 420 1260 92 1351 PB.1880.3 chr2 + 1535 14 novel_not_in_catalog GMPPA novel NA NA NA NA no_subtype TRUE canonical NA NA 1241 None 3 3 1 TRUE 0 0 NA B coding 420 1260 80 1339 PB.1019.10 chr1 + 3164 15 novel_not_in_catalog CD46 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1182 None 2 24 4 TRUE 0 0 NA B coding 342 1026 113 1138 PB.1019.11 chr1 + 3130 12 novel_not_in_catalog CD46 novel NA NA NA NA no_subtype FALSE canonical NA NA 1138 None 3 17 1 TRUE 0 0 NA B coding 321 963 94 1056 PB.3216.7 chr5 - 2948 20 novel_not_in_catalog FYB novel NA NA NA NA no_subtype FALSE canonical NA NA 121 None 16 1 0 TRUE 0 0 NA B coding 829 2487 149 2635 PB.3216.6 chr5 - 1632 18 novel_not_in_catalog FYB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 105 None 2 6 2 TRUE 0 0 NA B coding 430 1290 30 1319 PB.3216.1 chr5 - 1589 1 incomplete-splice_match FYB ENST00000351578.10 4750 18 3141 21 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.11206.51 chrX - 6409 25 novel_in_catalog FLNA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 143 None 3 6 0 FALSE 0 0 NA C coding 1157 3471 882 4352 PB.1019.16 chr1 + 1497 1 incomplete-splice_match CD46 ENST00000360212.6 3081 10 1578 7 no_subtype FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1158.1 chr1 - 3295 1 novel_in_catalog HNRNPU novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 37 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10572.3 chr21 + 2741 14 novel_not_in_catalog MX2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2075 None 11 4 1 FALSE 0 0 NA C coding 715 2145 171 2315 PB.908.3 chr1 + 4390 29 novel_in_catalog DHX9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3729 None 4 3 0 FALSE 0 0 NA C coding 1056 3168 911 4078 PB.3216.9 chr5 - 2111 14 novel_not_in_catalog FYB novel NA NA NA NA no_subtype FALSE canonical NA NA 1194 None 2 1 0 TRUE 0 0 NA B coding 684 2052 60 2111 PB.3216.8 chr5 - 2808 19 novel_not_in_catalog FYB novel NA NA NA NA no_subtype FALSE canonical NA NA 121 None 6 1 0 TRUE 0 0 NA B coding 783 2349 149 2497 PB.6253.1 chr11 + 2117 6 full-splice_match RCN1 ENST00000054950.3 2572 6 234 221 no_subtype FALSE canonical NA NA 947 None 3 4 0 FALSE 0 0 NA A coding 331 993 60 1052 PB.5167.1 chr8 - 1406 8 novel_not_in_catalog SHARPIN novel NA NA NA NA no_subtype FALSE canonical NA NA 205 None 13 9 2 FALSE 0 0 NA B coding 264 792 378 1169 PB.10356.3 chr20 + 2689 4 full-splice_match AAR2 ENST00000373932.3 2689 4 -2 2 no_subtype FALSE canonical NA NA 1335 None 4 7 1 FALSE 0 0 NA C coding 384 1152 349 1500 PB.10356.2 chr20 + 3003 3 novel_not_in_catalog AAR2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 843 None 15 18 1 TRUE 0 0 NA C coding 335 1005 87 1091 PB.10356.1 chr20 + 2431 4 novel_not_in_catalog AAR2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1081 None 3 5 1 TRUE 0 0 NA C coding 384 1152 95 1246 PB.7668.1 chr14 + 2579 10 full-splice_match BRMS1L ENST00000216807.11 2657 10 77 1 no_subtype TRUE canonical NA NA 976 None 4 8 0 FALSE 0 0 NA A coding 323 969 123 1091 PB.908.1 chr1 + 4244 28 full-splice_match DHX9 ENST00000367549.3 4240 28 -14 10 no_subtype FALSE canonical NA NA 3585 None 110 2 0 FALSE 0 0 NA C coding 1270 3810 125 3934 PB.1407.2 chr2 + 6262 4 genic NAGK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 6212 None 5 29 0 TRUE 0 0 NA C coding 99 297 2685 2981 PB.10775.2 chr22 - 3193 5 novel_not_in_catalog RPS19BP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 68 None 4 23 2 TRUE 0 0 NA B coding 111 333 17 349 PB.10775.1 chr22 - 3438 4 novel_not_in_catalog RPS19BP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 107 None 2 30 2 TRUE 0 0 NA B coding 111 333 56 388 PB.8832.1 chr17 - 2691 3 incomplete-splice_match MIR22HG ENST00000577164.1 931 4 175 -1935 5prime_fragment FALSE canonical NA NA 106 None 3 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11067.1 chrX - 2805 1 incomplete-splice_match CHM ENST00000357749.6 5442 15 2632 6 no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A coding 149 447 1033 1479 PB.7048.1 chr12 + 1553 3 novel_not_in_catalog GPR182 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1411 None 2 1 1 TRUE 0 0 NA A coding 404 1212 106 1317 PB.10709.1 chr22 + 1405 9 full-splice_match DRG1 ENST00000331457.8 1746 9 68 273 no_subtype FALSE canonical NA NA 1097 None 22 0 0 FALSE 0 0 NA A coding 367 1101 94 1194 PB.5525.2 chr9 + 1703 7 full-splice_match CDK9 ENST00000373264.4 2463 7 38 722 no_subtype FALSE canonical NA NA 815 None 2 2 0 FALSE 0 0 NA A coding 372 1116 63 1178 PB.8682.1 chr16 + 1694 1 full-splice_match THAP11 ENST00000303596.2 2114 1 418 2 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A coding 314 942 56 997 PB.4418.5 chr7 + 3550 8 novel_not_in_catalog IKZF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 912 None 2 5 0 TRUE 0 0 NA B coding 405 1215 405 1619 PB.1365.1 chr2 - 1950 14 full-splice_match CCT4 ENST00000394440.7 2520 14 148 422 no_subtype FALSE canonical NA NA 276 None 104 1 0 FALSE 0 0 NA A coding 539 1617 150 1766 PB.6952.1 chr12 - 2898 1 genic_intron novelGene_490 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9453.1 chr17 + 2741 12 novel_not_in_catalog HEXDC novel NA NA NA NA no_subtype FALSE canonical NA NA 2273 None 2 15 0 FALSE 0 0 NA A coding 249 747 1732 2478 PB.6933.3 chr12 + 2969 4 novel_in_catalog TMEM106C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2228 None 7 14 0 FALSE 0 0 NA C coding 125 375 785 1159 PB.6933.1 chr12 + 1461 8 full-splice_match TMEM106C ENST00000552561.5 810 8 -8 -643 no_subtype FALSE canonical NA NA 721 None 24 6 0 FALSE 0 0 NA C coding 250 750 66 815 PB.6933.6 chr12 + 2971 4 novel_in_catalog TMEM106C novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2256 None 2 15 1 FALSE 0 0 NA C coding 125 375 813 1187 PB.6933.7 chr12 + 2926 7 novel_in_catalog TMEM106C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1198 None 2 14 0 FALSE 0 0 NA C coding 173 519 774 1292 PB.6933.4 chr12 + 2879 5 novel_in_catalog TMEM106C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2136 None 2 17 0 FALSE 0 0 NA C coding 119 357 784 1140 PB.6933.5 chr12 + 3829 3 novel_in_catalog TMEM106C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 237 None 5 14 0 FALSE 0 0 NA C coding 125 375 774 1148 PB.1783.1 chr2 + 2887 2 genic_intron novelGene_1369 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1495 None 2 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6933.8 chr12 + 1477 8 full-splice_match TMEM106C ENST00000429772.6 1515 8 7 31 no_subtype FALSE canonical NA NA 762 None 2 4 0 FALSE 0 0 NA C coding 250 750 107 856 PB.6933.9 chr12 + 3017 4 novel_in_catalog TMEM106C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2273 None 3 13 0 FALSE 0 0 NA C coding 125 375 830 1204 PB.9554.2 chr18 - 1851 12 full-splice_match ATP5A1 ENST00000398752.10 5818 12 63 3904 no_subtype FALSE canonical NA NA 119 None 437 0 0 FALSE 0 0 NA C coding 553 1659 60 1718 PB.9554.1 chr18 - 2529 10 novel_not_in_catalog ATP5A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 682 None 3 11 1 TRUE 0 0 NA C coding 365 1095 1301 2395 PB.2041.4 chr3 - 3122 1 genic_intron novelGene_160 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.216 chr14 - 1534 9 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 10 3 TRUE 0 0 NA B coding 196 588 814 1401 PB.1661.1 chr2 - 2894 17 novel_not_in_catalog ITGB6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 257 None 4 3 1 TRUE 0 0 NA A coding 788 2364 197 2560 PB.1033.1 chr1 + 2688 11 novel_not_in_catalog TRAF5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1893 None 2 8 1 TRUE 0 0 NA A coding 557 1671 2 1672 PB.4418.6 chr7 + 3427 10 novel_not_in_catalog IKZF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 789 None 10 7 0 TRUE 0 0 NA B coding 432 1296 201 1496 PB.8573.1 chr16 + 1496 11 full-splice_match KAT8 ENST00000219797.8 1525 11 0 29 no_subtype FALSE canonical NA NA 1330 None 2 1 0 FALSE 0 0 NA A coding 458 1374 19 1392 PB.2041.2 chr3 - 2580 1 incomplete-splice_match TBC1D5 ENST00000253692.11 7854 22 5263 12 no_subtype FALSE canonical NA NA NA None 5 23 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2041.3 chr3 - 6546 27 novel_not_in_catalog TBC1D5 novel NA NA NA NA no_subtype TRUE canonical NA NA 144 None 4 33 0 TRUE 0 0 NA B coding 795 2385 369 2753 PB.7393.1 chr13 - 2401 19 full-splice_match MIPEP ENST00000382172.3 2400 19 -8 7 no_subtype FALSE canonical NA NA 296 None 2 5 0 FALSE 0 0 NA A coding 713 2139 108 2246 PB.8459.23 chr16 - 4268 22 incomplete-splice_match MYH11 ENST00000396324.7 6847 42 2605 -26 5prime_fragment FALSE canonical NA NA 24 None 2 10 0 FALSE 0 0 NA C coding 1119 3357 64 3420 PB.8918.1 chr17 - 4063 24 novel_not_in_catalog CTC1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 48 None 4 7 1 TRUE 0 0 NA B coding 1217 3651 16 3666 PB.8918.2 chr17 - 3576 20 novel_in_catalog CTC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 214 None 2 7 1 FALSE 0 0 NA B coding 918 2754 465 3218 PB.5074.1 chr8 - 3930 9 novel_not_in_catalog EIF3H novel NA NA NA NA no_subtype FALSE canonical NA NA 158 None 2 21 0 TRUE 0 0 NA C coding 352 1056 27 1082 PB.2631.2 chr3 - 3189 24 novel_not_in_catalog CLCN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 235 None 4 2 1 FALSE 0 0 NA C coding 867 2601 173 2773 PB.1472.1 chr2 - 5776 6 genic EIF2AK3 novel NA NA NA NA no_subtype TRUE canonical NA NA 3793 None 2 38 3 TRUE 0 0 NA B coding 65 195 201 395 PB.7959.215 chr14 - 1562 9 fusion CH17-262H11.1,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 103 None 2 14 4 TRUE 0 0 NA B coding 196 588 842 1429 PB.5074.5 chr8 - 1699 1 novel_in_catalog EIF3H novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C coding 121 363 28 390 PB.2669.2 chr3 + 2976 2 novel_not_in_catalog CCDC50 novel NA NA NA NA no_subtype FALSE canonical NA NA 1740 None 4 20 1 TRUE 0 0 NA B coding 75 225 149 373 PB.9012.1 chr17 - 3861 1 novel_in_catalog SEZ6 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A coding 144 432 1519 1950 PB.383.1 chr1 + 1470 7 full-splice_match MRPL37 ENST00000360840.9 1483 7 10 3 no_subtype FALSE canonical NA NA 1261 None 102 1 0 FALSE 0 0 NA A coding 423 1269 68 1336 PB.188.3 chr1 - 5878 8 novel_not_in_catalog AHDC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 68 None 2 3 1 TRUE 0 0 NA B coding 1603 4809 792 5600 PB.5441.2 chr9 - 2809 16 novel_not_in_catalog PTBP3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 206 None 2 16 1 TRUE 0 0 NA C coding 470 1410 258 1667 PB.188.1 chr1 - 6237 8 novel_in_catalog AHDC1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 23 None 5 2 0 FALSE 0 0 NA B coding 1603 4809 750 5558 PB.7959.213 chr14 - 1489 8 fusion IGHG1,IGHV3-7,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 85 None 2 9 3 TRUE 0 0 NA B coding 196 588 769 1356 PB.4961.1 chr8 + 4635 23 novel_not_in_catalog SULF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 3092 None 2 12 0 TRUE 0 0 NA A coding 871 2613 508 3120 PB.8095.1 chr15 - 2912 2 genic_intron novelGene_524 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1827 None 6 21 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.4329.1 chr7 - 2959 1 genic_intron novelGene_220 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 21 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3143.1 chr4 - 1865 9 full-splice_match IRF2 ENST00000393593.7 2303 9 43 395 no_subtype FALSE canonical NA NA 159 None 27 1 0 FALSE 0 0 NA C coding 349 1047 166 1212 PB.10797.2 chr22 + 1861 10 novel_in_catalog XRCC6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1444 None 2 0 0 FALSE 0 0 NA B coding 476 1428 208 1635 PB.5014.1 chr8 - 2049 5 full-splice_match GEM ENST00000396194.6 2103 5 37 17 no_subtype FALSE canonical NA NA 109 None 8 3 0 FALSE 0 0 NA A coding 296 888 119 1006 PB.7964.2 chr15 - 3375 22 novel_not_in_catalog TUBGCP5 novel NA NA NA NA no_subtype TRUE canonical NA NA 183 None 2 8 0 TRUE 0 0 NA B coding 900 2700 38 2737 PB.557.1 chr1 - 2866 2 genic_intron novelGene_988 novel NA NA NA NA no_subtype FALSE canonical NA NA 262 None 4 20 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4191.1 chr6 + 1714 8 full-splice_match GINM1 ENST00000367419.9 2024 8 105 205 no_subtype TRUE canonical NA NA 897 None 3 2 0 FALSE 0 0 NA A coding 330 990 17 1006 PB.4820.2 chr8 - 1497 3 full-splice_match NUDT18 ENST00000611621.1 1497 3 -4 4 no_subtype TRUE canonical NA NA 263 None 3 0 0 FALSE 0 0 NA A coding 323 969 102 1070 PB.10797.1 chr22 + 2088 14 novel_not_in_catalog XRCC6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1672 None 82 1 0 TRUE 0 0 NA B coding 609 1827 37 1863 PB.3440.1 chr5 - 2621 2 genic_intron novelGene_1073 novel NA NA NA NA no_subtype FALSE canonical NA NA 1198 None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1943.1 chr2 - 1378 12 full-splice_match ILKAP ENST00000254654.7 1490 12 107 5 no_subtype FALSE canonical NA NA 124 None 2 2 0 FALSE 0 0 NA A coding 392 1176 70 1245 PB.6474.4 chr11 + 1565 9 novel_not_in_catalog SSH3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1065 None 2 2 1 FALSE 0 0 NA B coding 198 594 90 683 PB.2607.1 chr3 + 1016 6 full-splice_match NDUFB5 ENST00000259037.7 1141 6 107 18 no_subtype FALSE canonical NA NA 456 None 8 2 0 FALSE 0 0 NA A coding 189 567 8 574 PB.6797.1 chr12 - 1424 1 genic_intron novelGene_51 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6474.1 chr11 + 2649 15 novel_not_in_catalog SSH3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2100 None 2 10 0 TRUE 0 0 NA B coding 471 1413 113 1525 PB.6474.2 chr11 + 2659 16 novel_not_in_catalog SSH3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2096 None 4 6 0 TRUE 0 0 NA B coding 625 1875 113 1987 PB.6474.3 chr11 + 2699 15 novel_not_in_catalog SSH3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2155 None 36 8 0 TRUE 0 0 NA B coding 659 1977 70 2046 PB.7959.133 chr14 - 1484 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 20 2 TRUE 0 0 NA B coding 261 783 660 1442 PB.5202.1 chr9 - 2144 19 novel_not_in_catalog PUM3 novel NA NA NA NA no_subtype FALSE canonical NA NA 14 None 2 5 0 TRUE 0 0 NA B coding 648 1944 25 1968 PB.5202.2 chr9 - 2654 11 novel_not_in_catalog PUM3 novel NA NA NA NA no_subtype FALSE canonical NA NA 38 None 6 13 0 TRUE 0 0 NA B coding 354 1062 49 1110 PB.7959.130 chr14 - 1508 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 3 12 3 TRUE 0 0 NA B coding 254 762 703 1464 PB.8557.2 chr16 - 1084 3 full-splice_match DCTPP1 ENST00000319285.4 1222 3 55 83 no_subtype FALSE canonical NA NA 141 None 4 5 0 FALSE 0 0 NA A coding 170 510 41 550 PB.812.1 chr1 + 1224 6 novel_in_catalog DUSP12 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 854 None 2 1 0 FALSE 0 0 NA A coding 111 333 59 391 PB.9181.2 chr17 + 1665 11 incomplete-splice_match FMNL1 ENST00000587489.5 2487 14 817 5 internal_fragment FALSE canonical NA NA 1218 None 2 2 0 FALSE 0 0 NA A coding 431 1293 27 1319 PB.7959.134 chr14 - 3214 7 novel_not_in_catalog IGHG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 654 None 78 20 2 TRUE 0 0 NA B coding 265 795 1006 1800 PB.3117.5 chr4 - 3314 1 novel_in_catalog MARCH1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA C coding 304 912 436 1347 PB.2686.2 chr3 - 1695 3 novel_not_in_catalog RNF168 novel NA NA NA NA no_subtype FALSE canonical NA NA 291 None 5 14 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.3117.3 chr4 - 3365 5 novel_in_catalog MARCH1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 200 None 2 25 0 FALSE 0 0 NA C coding 528 1584 10 1593 PB.5469.5 chr9 - 5898 22 novel_in_catalog TNC novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 176 None 2 5 0 FALSE 0 0 NA B coding 1655 4965 313 5277 PB.3117.1 chr4 - 2163 4 full-splice_match MARCH1 ENST00000339875.9 2476 4 1 312 no_subtype TRUE canonical NA NA 220 None 26 21 0 FALSE 0 0 NA C coding 272 816 30 845 PB.9312.1 chr17 - 3531 28 novel_not_in_catalog CEP112 novel NA NA NA NA no_subtype FALSE canonical NA NA 229 None 4 4 0 TRUE 0 0 NA A coding 955 2865 238 3102 PB.5469.4 chr9 - 3037 16 incomplete-splice_match TNC ENST00000537320.5 4946 20 2399 -490 5prime_fragment FALSE canonical NA NA 128 None 4 4 0 FALSE 0 0 NA B coding 685 2055 362 2416 PB.8434.2 chr16 - 2998 2 genic DEXI novel NA NA NA NA no_subtype TRUE canonical NA NA 2793 None 4 18 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.8434.3 chr16 - 2998 2 genic DEXI novel NA NA NA NA no_subtype FALSE canonical NA NA 2793 None 3 22 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.8434.1 chr16 - 3024 4 genic DEXI novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2935 None 3 16 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.5510.2 chr9 - 3351 12 full-splice_match MAPKAP1 ENST00000265960.7 3395 12 41 3 no_subtype FALSE canonical NA NA 223 None 10 18 0 FALSE 0 0 NA A coding 522 1566 293 1858 PB.1392.2 chr2 + 2910 11 novel_not_in_catalog ARHGAP25 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2080 None 2 19 3 TRUE 0 0 NA B coding 271 813 746 1558 PB.530.1 chr1 + 3056 6 full-splice_match PRPF38B ENST00000370025.8 3693 6 15 622 no_subtype FALSE canonical NA NA 1036 None 18 6 0 FALSE 0 0 NA C coding 546 1638 255 1892 PB.666.2 chr1 + 4288 22 novel_in_catalog SETDB1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3808 None 4 18 4 FALSE 0 0 NA B coding 1292 3876 48 3923 PB.6872.3 chr12 - 1483 6 full-splice_match KRAS ENST00000256078.8 1119 6 -128 -236 no_subtype FALSE canonical NA NA 181 None 3 5 0 FALSE 0 0 NA C coding 189 567 193 759 PB.9910.1 chr19 + 1820 2 novel_not_in_catalog ZNF431 novel NA NA NA NA no_subtype TRUE canonical NA NA 1192 None 2 8 1 TRUE 0 0 NA A coding 139 417 151 567 PB.7420.1 chr13 + 3396 16 novel_not_in_catalog B3GLCT novel NA NA NA NA no_subtype FALSE canonical NA NA 1364 None 4 19 0 TRUE 0 0 NA B coding 498 1494 36 1529 PB.7420.2 chr13 + 2753 8 novel_in_catalog B3GLCT novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 737 None 2 17 0 FALSE 0 0 NA B coding 103 309 594 902 PB.2140.3 chr3 + 3134 3 genic LIMD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2858 None 2 19 1 TRUE 0 0 NA C coding 62 186 286 471 PB.8229.2 chr15 + 1764 15 full-splice_match PSTPIP1 ENST00000558012.5 1896 15 128 4 no_subtype FALSE canonical NA NA 1480 None 7 2 0 FALSE 0 0 NA C coding 415 1245 365 1609 PB.1392.1 chr2 + 2646 12 novel_not_in_catalog ARHGAP25 novel NA NA NA NA no_subtype FALSE canonical NA NA 1812 None 108 1 0 TRUE 0 0 NA B coding 646 1938 80 2017 PB.5425.1 chr9 - 4679 39 novel_not_in_catalog IKBKAP novel NA NA NA NA no_subtype FALSE canonical NA NA 75 None 3 4 1 TRUE 0 0 NA A coding 1332 3996 203 4198 PB.1480.1 chr2 + 1534 7 full-splice_match CIAO1 ENST00000488633.1 1533 7 112 -113 no_subtype FALSE canonical NA NA 886 None 7 9 0 FALSE 0 0 NA A coding 339 1017 108 1124 PB.3992.8 chr6 - 1641 9 novel_not_in_catalog EEF1A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 32 None 3 2 2 TRUE 0 0 NA C coding 264 792 63 854 PB.9229.1 chr17 + 3073 5 novel_not_in_catalog TMEM92 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 373 None 3 17 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.3992.7 chr6 - 1920 6 novel_in_catalog EEF1A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 33 None 2 11 0 FALSE 0 0 NA C coding 231 693 753 1445 PB.3992.4 chr6 - 1555 8 novel_not_in_catalog EEF1A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 32 None 2 1 0 TRUE 0 0 NA C coding 400 1200 63 1262 PB.3992.5 chr6 - 1646 8 novel_not_in_catalog EEF1A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 32 None 4 1 0 TRUE 0 0 NA C coding 264 792 63 854 PB.9189.1 chr17 + 1906 1 genic_intron novelGene_460 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2221.1 chr3 + 3585 2 antisense novelGene_DCAF1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1135 None 10 40 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8965.1 chr17 - 2857 1 incomplete-splice_match ZNF286B ENST00000285274.9 5145 4 2278 11 no_subtype FALSE canonical NA NA NA None 3 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3571.1 chr5 + 1396 1 antisense novelGene_CTB-89H12.4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 4 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.11138.1 chrX - 1326 2 full-splice_match C1GALT1C1 ENST00000304661.5 1613 2 120 167 no_subtype FALSE canonical NA NA 114 None 2 1 0 FALSE 0 0 NA A coding 318 954 120 1073 PB.3780.1 chr6 - 5653 25 novel_not_in_catalog GPLD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 142 None 2 33 3 TRUE 0 0 NA A coding 673 2019 458 2476 PB.2221.2 chr3 + 3564 3 antisense novelGene_DCAF1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1104 None 3 38 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.11229.1 chrY + 4421 17 novel_not_in_catalog DDX3Y novel NA NA NA NA no_subtype FALSE canonical NA NA 1984 None 9 89 3 FALSE 0 0 NA A coding 658 1974 88 2061 PB.3571.4 chr5 - 3963 11 novel_not_in_catalog CSNK1A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 21 None 14 10 0 TRUE 0 0 NA C coding 337 1011 443 1453 PB.10612.7 chr21 + 2845 2 novel_in_catalog PRMT2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 86 None 2 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10624.11 chr22 - 2766 8 novel_in_catalog DGCR2 novel NA NA NA NA no_combination_of_known_junctions FALSE non_canonical NA NA 269 None 2 13 0 FALSE 0 0 NA C coding 408 1224 191 1414 PB.8945.8 chr17 + 2705 15 novel_not_in_catalog TRPV2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2475 None 2 4 0 FALSE 0 0 NA B coding 511 1533 1041 2573 PB.10612.2 chr21 + 1436 8 novel_in_catalog PRMT2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1001 None 2 4 0 FALSE 0 0 NA C coding 324 972 172 1143 PB.10612.3 chr21 + 947 6 full-splice_match PRMT2 ENST00000397628.5 954 6 0 7 no_subtype FALSE canonical NA NA 635 None 4 0 0 FALSE 0 0 NA C coding 253 759 147 905 PB.10612.1 chr21 + 2057 11 full-splice_match PRMT2 ENST00000397638.6 2131 11 62 12 no_subtype FALSE canonical NA NA 1412 None 13 4 0 FALSE 0 0 NA C coding 433 1299 144 1442 PB.8945.3 chr17 + 2524 15 novel_not_in_catalog TRPV2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2316 None 54 5 1 FALSE 0 0 NA B coding 652 1956 128 2083 PB.8945.2 chr17 + 2697 15 novel_not_in_catalog TRPV2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2489 None 8 6 1 TRUE 0 0 NA B coding 763 2289 299 2587 PB.9918.1 chr19 - 3207 20 novel_not_in_catalog CEP89 novel NA NA NA NA no_subtype FALSE canonical NA NA 120 None 2 5 0 TRUE 0 0 NA B coding 783 2349 82 2430 PB.4124.2 chr6 - 4142 19 novel_not_in_catalog EPB41L2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 92 None 2 8 1 TRUE 0 0 NA B coding 778 2334 554 2887 PB.4124.3 chr6 - 4152 19 novel_not_in_catalog EPB41L2 novel NA NA NA NA no_subtype FALSE canonical NA NA 104 None 14 8 1 TRUE 0 0 NA B coding 778 2334 565 2898 PB.8979.2 chr17 - 1636 11 full-splice_match ALDH3A1 ENST00000225740.10 1779 11 135 8 no_subtype TRUE canonical NA NA 40 None 3 0 0 FALSE 0 0 NA A coding 453 1359 46 1404 PB.80.1 chr1 + 3367 10 novel_not_in_catalog FBLIM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1331 None 24 20 0 TRUE 0 0 NA B coding 373 1119 324 1442 PB.4684.1 chr7 + 1454 11 fusion AKR1B10,AKR1B15 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1100 None 66 5 2 TRUE 0 0 NA A coding 329 987 200 1186 PB.80.2 chr1 + 3096 9 novel_not_in_catalog FBLIM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1068 None 26 16 0 TRUE 0 0 NA B coding 373 1119 61 1179 PB.2349.3 chr3 + 2003 3 full-splice_match NFKBIZ ENST00000495089.1 877 3 371 -1497 no_subtype FALSE canonical NA NA 300 None 6 19 0 FALSE 0 0 NA C coding 46 138 214 351 PB.5417.1 chr9 - 1818 2 antisense novelGene_RP11-217B7.2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1694 None 2 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2349.1 chr3 + 3910 12 full-splice_match NFKBIZ ENST00000326172.9 3923 12 6 7 no_subtype FALSE canonical NA NA 2212 None 12 20 0 FALSE 0 0 NA C coding 718 2154 110 2263 PB.8182.4 chr15 - 3221 3 novel_not_in_catalog ANP32A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1341 None 4 28 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.8182.5 chr15 - 2631 1 novel_in_catalog ANP32A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.11184.4 chrX - 1677 5 novel_in_catalog IDS novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 218 None 2 7 0 FALSE 0 0 NA C coding 152 456 116 571 PB.9680.1 chr19 + 1737 11 full-splice_match PIAS4 ENST00000262971.2 3159 11 102 1320 no_subtype FALSE canonical NA NA 1286 None 18 5 0 FALSE 0 0 NA A coding 510 1530 14 1543 PB.4901.2 chr8 - 3015 11 novel_in_catalog SLC20A2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 174 None 13 4 0 FALSE 0 0 NA B coding 652 1956 439 2394 PB.4901.1 chr8 - 3885 11 novel_not_in_catalog SLC20A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 338 None 19 4 0 FALSE 0 0 NA B coding 652 1956 603 2558 PB.8182.3 chr15 - 5716 4 genic MIR4312 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 761 None 2 32 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.7608.41 chr14 + 1445 7 fusion TRAV26-1,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 896 None 2 4 1 TRUE 0 0 NA B coding 128 384 78 461 PB.10305.3 chr20 - 3679 14 full-splice_match ACSS1 ENST00000323482.8 3680 14 -8 9 no_subtype FALSE canonical NA NA 422 None 12 7 0 FALSE 0 0 NA A coding 689 2067 89 2155 PB.7608.43 chr14 + 1479 6 novel_not_in_catalog TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 938 None 2 3 1 TRUE 0 0 NA B coding 246 738 197 934 PB.7608.42 chr14 + 1563 7 novel_not_in_catalog TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1015 None 3 3 1 TRUE 0 0 NA B coding 113 339 242 580 PB.7608.45 chr14 + 1454 6 fusion TRAC,TRAV29DV5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 906 None 2 8 1 TRUE 0 0 NA B coding 133 399 115 513 PB.7608.44 chr14 + 1410 8 fusion TRAV27,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 868 None 2 10 2 TRUE 0 0 NA A coding 140 420 56 475 PB.7608.47 chr14 + 1398 7 fusion TRAV30,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 852 None 2 6 2 TRUE 0 0 NA A coding 272 816 33 848 PB.7608.46 chr14 + 1437 7 fusion TRAC,TRAV29DV5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 891 None 2 6 2 TRUE 0 0 NA B coding 134 402 55 456 PB.7608.49 chr14 + 1321 8 fusion TRAV38-2DV8,TRAC novel NA NA NA NA no_subtype TRUE non_canonical NA NA 779 None 3 6 3 TRUE 0 0 NA B coding 154 462 314 775 PB.2744.1 chr4 + 2842 11 full-splice_match TRMT44 ENST00000389737.4 2799 11 -18 -25 no_subtype FALSE canonical NA NA 2062 None 3 2 0 FALSE 0 0 NA A coding 757 2271 19 2289 PB.4651.1 chr7 + 1571 8 novel_in_catalog AHCYL2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 989 None 3 5 0 FALSE 0 0 NA B coding 278 834 274 1107 PB.7163.11 chr12 + 3375 2 antisense novelGene_RP11-1105G2.4_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2077 None 2 34 1 FALSE 0 0 NA A coding 122 366 1637 2002 PB.11206.2 chrX - 8199 46 full-splice_match FLNA ENST00000360319.8 8281 46 66 16 no_subtype FALSE canonical NA NA 345 None 162 1 0 FALSE 0 0 NA C coding 2612 7836 54 7889 PB.4852.12 chr8 + 3055 1 novel_in_catalog PTK2B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 29 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9444.1 chr17 - 1489 9 novel_in_catalog NOTUM novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 37 None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1609.1 chr2 - 1692 16 full-splice_match DARS ENST00000264161.8 2361 16 80 589 no_subtype FALSE canonical NA NA 202 None 27 0 0 FALSE 0 0 NA A coding 501 1503 137 1639 PB.6635.1 chr11 - 2965 2 novel_not_in_catalog EXPH5 novel NA NA NA NA no_subtype FALSE canonical NA NA 1035 None 2 19 1 TRUE 0 0 NA B coding 134 402 109 510 PB.4594.2 chr7 + 3780 11 full-splice_match PIK3CG ENST00000440650.6 3828 11 45 3 no_subtype FALSE canonical NA NA 3070 None 4 1 0 FALSE 0 0 NA C coding 1102 3306 41 3346 PB.8971.2 chr17 - 2724 7 novel_not_in_catalog GRAP novel NA NA NA NA no_subtype TRUE canonical NA NA 109 None 2 15 0 TRUE 0 0 NA C coding 122 366 1055 1420 PB.8971.3 chr17 - 1381 1 incomplete-splice_match GRAP ENST00000284154.9 2651 5 1259 12 no_subtype FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6148.2 chr11 - 3651 20 full-splice_match NUP98 ENST00000397004.8 3923 20 -7 279 no_subtype FALSE canonical NA NA 149 None 4 7 0 FALSE 0 0 NA C coding 920 2760 178 2937 PB.6148.3 chr11 - 3694 20 full-splice_match NUP98 ENST00000397007.8 3698 20 1 3 no_subtype FALSE canonical NA NA 147 None 2 8 0 FALSE 0 0 NA C coding 937 2811 176 2986 PB.8971.6 chr17 - 2835 3 novel_not_in_catalog GRAP novel NA NA NA NA no_subtype FALSE canonical NA NA 421 None 2 23 0 TRUE 0 0 NA C coding 135 405 1153 1557 PB.7135.2 chr12 + 1873 2 genic_intron novelGene_744 novel NA NA NA NA no_subtype FALSE canonical NA NA 279 None 2 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8971.5 chr17 - 6508 2 novel_not_in_catalog GRAP novel NA NA NA NA no_subtype FALSE canonical NA NA 2024 None 6 24 0 TRUE 0 0 NA C coding 159 477 2756 3232 PB.8642.3 chr16 + 3315 15 novel_not_in_catalog ADGRG5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1569 None 2 18 4 TRUE 0 0 NA C coding 524 1572 96 1667 PB.8642.2 chr16 + 3040 11 novel_in_catalog ADGRG5 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical NA NA 1303 None 2 16 1 FALSE 0 0 NA C coding 451 1353 96 1448 PB.8642.1 chr16 + 3315 12 full-splice_match ADGRG5 ENST00000349457.7 3557 12 236 6 no_subtype FALSE canonical NA NA 1569 None 25 14 0 FALSE 0 0 NA C coding 528 1584 84 1667 PB.576.2 chr1 - 1051 6 novel_not_in_catalog RHOC novel NA NA NA NA no_subtype FALSE canonical NA NA 56 None 5 5 0 TRUE 0 0 NA B coding 193 579 64 642 PB.8642.5 chr16 + 3690 15 novel_not_in_catalog ADGRG5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1941 None 2 24 1 TRUE 0 0 NA C coding 528 1584 456 2039 PB.8642.4 chr16 + 3660 11 novel_in_catalog ADGRG5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1293 None 2 20 0 FALSE 0 0 NA C coding 523 1569 86 1654 PB.1832.3 chr2 - 1556 4 full-splice_match IDH1 ENST00000462386.5 1614 4 -22 80 no_subtype FALSE canonical NA NA 145 None 18 10 0 FALSE 0 0 NA C coding 177 531 236 766 PB.5197.1 chr9 - 1402 5 genic RP11-264I13.2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 199 None 2 14 3 TRUE 0 0 NA A non_coding NA NA NA NA PB.760.2 chr1 - 2838 15 novel_not_in_catalog FCRL3 novel NA NA NA NA no_subtype FALSE canonical NA NA 108 None 3 6 1 FALSE 0 0 NA A coding 736 2208 244 2451 PB.6906.10 chr12 + 3142 1 genic_intron novelGene_402 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5724.1 chr10 + 3147 6 novel_not_in_catalog SVIL-AS1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2947 None 2 11 3 TRUE 0 0 NA B coding 170 510 1529 2038 PB.1740.2 chr2 + 4482 51 full-splice_match COL3A1 ENST00000304636.7 5543 51 109 952 no_subtype FALSE canonical NA NA 4315 None 8 0 0 FALSE 0 0 NA C coding 417 1251 2514 3764 PB.5724.3 chr10 + 3119 6 novel_not_in_catalog SVIL-AS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2920 None 7 10 3 TRUE 0 0 NA B coding 170 510 1502 2011 PB.7743.1 chr14 + 2464 1 novel_in_catalog MNAT1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1740.7 chr2 + 3067 29 novel_in_catalog COL3A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2647 None 2 1 0 FALSE 0 0 NA C coding 417 1251 846 2096 PB.499.1 chr1 + 4253 23 full-splice_match ABCD3 ENST00000370214.8 3538 23 -20 -695 no_subtype FALSE canonical NA NA 1946 None 13 17 2 FALSE 0 0 NA C coding 659 1977 45 2021 PB.10789.2 chr22 + 1917 15 incomplete-splice_match L3MBTL2 ENST00000216237.9 3296 17 97 1282 3prime_fragment FALSE canonical NA NA 1883 None 2 1 0 FALSE 0 0 NA C coding 618 1854 62 1915 PB.10789.1 chr22 + 3330 17 full-splice_match L3MBTL2 ENST00000216237.9 3296 17 94 -128 no_subtype FALSE canonical NA NA 2069 None 21 13 0 FALSE 0 0 NA C coding 705 2115 65 2179 PB.1606.1 chr2 - 2743 2 genic_intron novelGene_1164 novel NA NA NA NA no_subtype FALSE canonical NA NA 2095 None 2 23 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7440.2 chr13 - 3060 21 novel_not_in_catalog POSTN novel NA NA NA NA no_subtype FALSE non_canonical NA NA 158 None 2 12 3 TRUE 0 0 NA C coding 674 2022 40 2061 PB.7440.3 chr13 - 2908 20 novel_in_catalog POSTN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 158 None 45 5 0 FALSE 0 0 NA C coding 751 2253 40 2292 PB.9209.1 chr17 + 2067 2 genic_intron novelGene_481 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 605 None 5 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.186.2 chr1 - 4156 9 full-splice_match WASF2 ENST00000618852.4 5676 9 111 1409 no_subtype FALSE canonical NA NA 62 None 2 18 0 FALSE 0 0 NA C coding 498 1494 106 1599 PB.816.5 chr1 + 2707 8 novel_not_in_catalog UHMK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1059 None 4 9 0 FALSE 0 0 NA C coding 288 864 340 1203 PB.7440.4 chr13 - 3125 21 full-splice_match POSTN ENST00000541179.5 3214 21 79 10 no_subtype FALSE canonical NA NA 158 None 9 7 1 FALSE 0 0 NA C coding 781 2343 40 2382 PB.6192.1 chr11 - 3406 10 novel_not_in_catalog TMEM41B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 236 None 13 22 2 TRUE 0 0 NA B coding 291 873 116 988 PB.525.1 chr1 + 2757 17 novel_not_in_catalog RNPC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1675 None 3 13 0 TRUE 0 0 NA B coding 517 1551 110 1660 PB.525.2 chr1 + 2754 16 novel_not_in_catalog RNPC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1671 None 4 13 0 TRUE 0 0 NA B coding 517 1551 106 1656 PB.816.4 chr1 + 2868 8 novel_not_in_catalog UHMK1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1220 None 2 11 1 TRUE 0 0 NA C coding 310 930 145 1074 PB.2142.1 chr3 + 3525 20 full-splice_match SACM1L ENST00000389061.9 3723 20 181 17 no_subtype TRUE canonical NA NA 1650 None 133 5 0 FALSE 0 0 NA C coding 587 1761 24 1784 PB.2355.1 chr3 + 1560 11 incomplete-splice_match BBX ENST00000325805.12 3517 18 65 1892 3prime_fragment FALSE canonical NA NA 1128 None 28 1 0 FALSE 0 0 NA C coding 446 1338 223 1560 PB.2355.2 chr3 + 4192 2 full-splice_match BBX ENST00000474137.1 546 2 -1 -3645 no_subtype FALSE canonical NA NA 123 None 2 31 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2355.3 chr3 - 2863 2 antisense novelGene_BBX_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1209 None 2 22 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.2776.1 chr4 + 2633 30 novel_not_in_catalog ANAPC4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2291 None 3 2 0 TRUE 0 0 NA B coding 808 2424 93 2516 PB.2676.4 chr3 - 1990 15 novel_not_in_catalog LSG1 novel NA NA NA NA no_subtype FALSE canonical NA NA 163 None 31 0 0 TRUE 0 0 NA B coding 642 1926 65 1990 PB.2776.3 chr4 + 2638 30 novel_not_in_catalog ANAPC4 novel NA NA NA NA no_subtype TRUE canonical NA NA 2296 None 11 2 0 TRUE 0 0 NA B coding 808 2424 98 2521 PB.2776.2 chr4 + 2640 30 novel_not_in_catalog ANAPC4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2298 None 2 3 1 TRUE 0 0 NA B coding 808 2424 100 2523 PB.6513.1 chr11 + 2343 17 novel_in_catalog ATG16L2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1681 None 2 5 0 FALSE 0 0 NA A coding 591 1773 12 1784 PB.7923.1 chr14 + 1948 7 full-splice_match WDR25 ENST00000402312.7 1969 7 -2 23 no_subtype FALSE canonical NA NA 1487 None 5 1 0 FALSE 0 0 NA C coding 536 1608 99 1706 PB.2985.1 chr4 + 1589 3 full-splice_match CISD2 ENST00000273986.8 2327 3 63 675 no_subtype FALSE canonical NA NA 362 None 6 10 0 FALSE 0 0 NA A coding 135 405 45 449 PB.2676.7 chr3 - 1578 7 novel_in_catalog LSG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 128 None 2 14 0 FALSE 0 0 NA B coding 255 765 30 794 PB.2335.2 chr3 + 1461 9 full-splice_match NIT2 ENST00000465368.5 1469 9 7 1 no_subtype FALSE canonical NA NA 1287 None 2 1 0 FALSE 0 0 NA C coding 159 477 900 1376 PB.7580.2 chr13 + 3912 8 novel_not_in_catalog CUL4A novel NA NA NA NA no_subtype FALSE canonical NA NA 765 None 2 23 0 FALSE 0 0 NA C coding 260 780 1 780 PB.2335.1 chr3 + 1392 9 novel_not_in_catalog NIT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1225 None 2 2 1 TRUE 0 0 NA C coding 159 477 838 1314 PB.10963.1 chrX - 3031 26 novel_not_in_catalog GRIPAP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 76 None 46 6 1 TRUE 0 0 NA B coding 751 2253 35 2287 PB.1042.2 chr1 - 1988 6 novel_not_in_catalog NSL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 247 None 3 5 0 FALSE 0 0 NA C coding 193 579 14 592 PB.128.1 chr1 + 2946 1 genic_intron novelGene_216 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2676.1 chr3 - 2933 16 novel_not_in_catalog LSG1 novel NA NA NA NA no_subtype FALSE canonical NA NA 133 None 12 9 0 TRUE 0 0 NA B coding 658 1974 35 2008 PB.5966.1 chr10 - 5462 17 full-splice_match DNMBP ENST00000324109.8 6400 17 23 915 no_subtype FALSE canonical NA NA 59 None 8 1 0 FALSE 0 0 NA C coding 1577 4731 70 4800 PB.5966.5 chr10 - 3620 1 novel_in_catalog DNMBP novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 14 0 FALSE 0 0 NA C coding 403 1209 149 1357 PB.8612.1 chr16 - 1748 10 novel_not_in_catalog AKTIP novel NA NA NA NA no_subtype FALSE canonical NA NA 105 None 14 3 0 FALSE 0 0 NA A coding 287 861 194 1054 PB.11207.1 chrX + 740 7 full-splice_match RPL10 ENST00000424325.6 2318 7 149 1429 no_subtype FALSE canonical NA NA 531 None 34 1 0 FALSE 0 0 NA A coding 214 642 40 681 PB.3264.1 chr5 - 1592 3 genic_intron novelGene_551 novel NA NA NA NA no_subtype FALSE canonical NA NA 75 None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1555.3 chr2 + 1765 11 novel_not_in_catalog WASH2P novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1296 None 2 7 1 TRUE 0 0 NA B coding 266 798 630 1427 PB.9040.1 chr17 - 1436 2 full-splice_match EVI2A ENST00000462804.2 1854 2 298 120 no_subtype FALSE canonical NA NA 92 None 35 7 1 FALSE 0 0 NA A coding 236 708 103 810 PB.6275.1 chr11 - 2736 11 full-splice_match PAMR1 ENST00000619888.4 3142 11 395 11 no_subtype FALSE canonical NA NA 124 None 16 0 0 FALSE 0 0 NA A coding 720 2160 52 2211 PB.2030.5 chr3 - 2690 2 genic_intron novelGene_131 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1215 None 2 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10257.1 chr20 + 2699 13 full-splice_match CDS2 ENST00000460006.5 9298 13 53 6546 no_subtype FALSE canonical NA NA 1459 None 3 6 0 FALSE 0 0 NA C coding 445 1335 255 1589 PB.1555.4 chr2 + 1882 11 novel_not_in_catalog WASH2P novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1415 None 2 6 0 TRUE 0 0 NA B coding 266 798 749 1546 PB.8000.2 chr15 - 1493 4 full-splice_match C15orf57 ENST00000416810.6 1519 4 23 3 no_subtype TRUE canonical NA NA 59 None 2 7 0 FALSE 0 0 NA C coding 185 555 72 626 PB.8000.1 chr15 - 1667 4 full-splice_match C15orf57 ENST00000358005.7 1704 4 28 9 no_subtype FALSE canonical NA NA 234 None 37 6 0 FALSE 0 0 NA C coding 183 549 253 801 PB.1569.1 chr2 - 3091 1 incomplete-splice_match TFCP2L1 ENST00000263707.5 9292 15 4480 1722 no_subtype FALSE canonical NA NA NA None 9 18 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5716.2 chr10 + 1657 1 antisense novelGene_ABI1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5716.3 chr10 + 3066 1 genic_intron novelGene_264 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4463.1 chr7 - 1550 6 novel_not_in_catalog NCF1C novel NA NA NA NA no_subtype FALSE canonical NA NA 97 None 2 3 1 FALSE 0 0 NA A coding 252 756 102 857 PB.2902.1 chr4 + 3915 1 genic_intron novelGene_732 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 28 0 FALSE 0 0 NA A coding 106 318 1824 2141 PB.6069.1 chr10 - 3506 15 novel_not_in_catalog CPXM2 novel NA NA NA NA no_subtype TRUE canonical NA NA 452 None 21 9 0 TRUE 0 0 NA A coding 756 2268 149 2416 PB.6048.6 chr10 - 2693 17 incomplete-splice_match EIF3A ENST00000541549.2 4495 23 -3 1805 internal_fragment FALSE canonical NA NA 199 None 3 0 0 FALSE 0 0 NA C coding 847 2541 151 2691 PB.2690.9 chr3 + 5808 17 novel_not_in_catalog PAK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5560 None 2 50 2 TRUE 0 0 NA B coding 524 1572 207 1778 PB.9060.1 chr17 + 2798 2 antisense novelGene_RAD51D_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 842 None 4 27 0 FALSE 0 0 NA B coding 119 357 2440 2796 PB.3543.1 chr5 + 2766 2 novel_not_in_catalog PCDHGA5 novel NA NA NA NA no_subtype FALSE canonical NA NA 849 None 4 19 1 TRUE 0 0 NA A coding 21 63 294 356 PB.9060.4 chr17 - 1742 10 full-splice_match RAD51D ENST00000345365.10 9988 10 10 8236 no_subtype FALSE canonical NA NA 328 None 3 6 0 FALSE 0 0 NA A coding 328 984 247 1230 PB.5708.3 chr10 + 1985 3 genic_intron novelGene_213 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1892 None 2 12 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.5561.2 chr9 + 3230 11 novel_not_in_catalog PTPA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2875 None 5 15 1 TRUE 0 0 NA C coding 413 1239 187 1425 PB.3928.1 chr6 + 1376 6 full-splice_match CNPY3 ENST00000372836.4 1704 6 302 26 no_subtype FALSE canonical NA NA 682 None 35 4 0 FALSE 0 0 NA C coding 278 834 70 903 PB.4354.2 chr7 - 1817 4 novel_in_catalog NOD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 159 None 3 7 0 FALSE 0 0 NA B coding 43 129 202 330 PB.4606.1 chr7 - 2941 3 full-splice_match THAP5 ENST00000415914.3 3306 3 60 305 no_subtype FALSE canonical NA NA 174 None 15 13 0 FALSE 0 0 NA A coding 395 1185 95 1279 PB.3928.2 chr6 + 1722 8 novel_not_in_catalog CNPY3 novel NA NA NA NA no_subtype TRUE canonical NA NA 1028 None 2 16 0 FALSE 0 0 NA C coding 163 489 761 1249 PB.10247.1 chr20 + 1531 4 novel_not_in_catalog AP5S1 novel NA NA NA NA no_subtype FALSE canonical NA NA 471 None 3 4 0 FALSE 0 0 NA C coding 200 600 296 895 PB.10247.2 chr20 + 1460 3 full-splice_match AP5S1 ENST00000615891.1 5362 3 -9 3911 no_subtype FALSE canonical NA NA 404 None 5 6 0 FALSE 0 0 NA C coding 200 600 229 828 PB.1954.1 chr2 + 1827 6 incomplete-splice_match RNPEPL1 ENST00000486058.5 3126 9 1301 -2 internal_fragment FALSE canonical NA NA 696 None 2 7 0 FALSE 0 0 NA A coding 315 945 43 987 PB.2425.6 chr3 - 1178 1 antisense novelGene_DTX3L_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9376.9 chr17 - 4329 32 novel_not_in_catalog UNC13D novel NA NA NA NA no_subtype FALSE canonical NA NA 130 None 2 9 2 TRUE 0 0 NA B coding 496 1488 2141 3628 PB.10608.1 chr21 + 1449 4 antisense novelGene_LSS_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1191 None 2 9 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2704.1 chr4 - 1570 6 full-splice_match SPON2 ENST00000290902.9 1869 6 290 9 no_subtype FALSE canonical NA NA 40 None 17 3 0 FALSE 0 0 NA A coding 331 993 44 1036 PB.5145.2 chr8 + 1888 7 novel_not_in_catalog PTP4A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1469 None 3 12 0 TRUE 0 0 NA B coding 173 519 923 1441 PB.9376.2 chr17 - 4001 33 novel_not_in_catalog UNC13D novel NA NA NA NA no_subtype FALSE canonical NA NA 147 None 16 4 0 TRUE 0 0 NA B coding 1071 3213 88 3300 PB.8629.3 chr16 + 2815 2 novel_not_in_catalog NLRC5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 71 None 2 13 1 TRUE 0 0 NA B coding 101 303 128 430 PB.8727.1 chr16 + 1474 1 novel_in_catalog CHST4 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8727.3 chr16 + 1998 2 full-splice_match CHST4 ENST00000539698.3 2183 2 175 10 no_subtype FALSE canonical NA NA 70 None 2 2 0 FALSE 0 0 NA C coding 386 1158 89 1246 PB.8727.2 chr16 + 1858 2 novel_not_in_catalog CHST4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 71 None 2 4 1 TRUE 0 0 NA C coding 370 1110 74 1183 PB.3123.1 chr4 + 2116 1 incomplete-splice_match PALLD ENST00000507699.1 3829 8 1707 7 no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5360.2 chr9 - 4582 18 novel_not_in_catalog SEMA4D novel NA NA NA NA no_subtype FALSE canonical NA NA 154 None 2 16 0 TRUE 0 0 NA B coding 851 2553 560 3112 PB.8629.1 chr16 - 2795 2 antisense novelGene_NLRC5_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 97 None 4 17 1 FALSE 0 0 NA B coding 132 396 432 827 PB.5360.9 chr9 - 4492 17 novel_not_in_catalog SEMA4D novel NA NA NA NA no_subtype FALSE canonical NA NA 135 None 4 9 0 TRUE 0 0 NA B coding 851 2553 478 3030 PB.1832.2 chr2 - 4027 9 novel_in_catalog IDH1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 133 None 2 20 0 FALSE 0 0 NA C coding 235 705 2475 3179 PB.1523.1 chr2 + 2752 1 novel_in_catalog IL1R2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5181.2 chr8 + 1611 5 novel_not_in_catalog MFSD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1293 None 3 3 1 FALSE 0 0 NA C coding 410 1230 235 1464 PB.469.1 chr1 - 1917 11 fusion GBP3,GBP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 49 None 86 4 1 TRUE 0 0 NA B coding 580 1740 69 1808 PB.1113.1 chr1 + 2545 18 novel_not_in_catalog GNPAT novel NA NA NA NA no_subtype FALSE canonical NA NA 2251 None 2 2 1 TRUE 0 0 NA B coding 571 1713 580 2292 PB.8676.1 chr16 - 3242 4 antisense novelGene_AC027682.1_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 35 None 2 14 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.9068.2 chr17 + 5619 23 novel_not_in_catalog AP2B1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2829 None 6 11 1 TRUE 0 0 NA C coding 951 2853 49 2901 PB.9068.3 chr17 + 3310 21 full-splice_match AP2B1 ENST00000621914.4 5702 21 61 2331 no_subtype FALSE canonical NA NA 2856 None 17 3 0 FALSE 0 0 NA C coding 937 2811 118 2928 PB.9068.1 chr17 + 3355 22 full-splice_match AP2B1 ENST00000610402.4 3204 22 17 -168 no_subtype TRUE canonical NA NA 2894 None 10 2 0 FALSE 0 0 NA C coding 951 2853 114 2966 PB.9068.6 chr17 + 2955 2 novel_not_in_catalog AP2B1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 310 None 4 24 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.3895.1 chr6 + 3420 16 novel_not_in_catalog TBC1D22B novel NA NA NA NA no_subtype FALSE canonical NA NA 3285 None 30 9 1 TRUE 0 0 NA C coding 505 1515 139 1653 PB.3895.2 chr6 + 2659 7 novel_in_catalog TBC1D22B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 925 None 3 5 0 FALSE 0 0 NA C coding 338 1014 125 1138 PB.3895.3 chr6 + 2518 13 full-splice_match TBC1D22B ENST00000373491.3 3462 13 20 924 no_subtype FALSE canonical NA NA 1515 None 2 5 0 FALSE 0 0 NA C coding 505 1515 127 1641 PB.3436.1 chr5 + 1741 2 full-splice_match TNFAIP8 ENST00000274456.6 795 2 101 -1047 no_subtype FALSE canonical NA NA 115 None 10 5 0 FALSE 0 0 NA C coding 188 564 115 678 PB.3436.3 chr5 - 2974 2 genic_intron novelGene_1048 novel NA NA NA NA no_subtype FALSE canonical NA NA 169 None 3 20 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.8522.1 chr16 - 2731 18 novel_not_in_catalog XPO6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 52 None 3 2 1 TRUE 0 0 NA B coding 682 2046 103 2148 PB.10460.1 chr20 + 3699 3 intergenic novelGene_557 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2931 None 2 36 1 FALSE 0 0 NA A coding 116 348 1149 1496 PB.2839.1 chr4 + 1384 9 full-splice_match OCIAD1 ENST00000264312.11 1414 9 24 6 no_subtype FALSE canonical NA NA 866 None 22 6 0 FALSE 0 0 NA A coding 245 735 167 901 PB.10854.1 chrX - 2980 1 intergenic novelGene_50 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1908.2 chr2 - 6375 1 antisense novelGene_SP140L_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 33 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2571.2 chr3 + 3859 2 novel_in_catalog MYNN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 58 None 5 27 0 FALSE 0 0 NA C coding 100 300 631 930 PB.3608.5 chr5 + 1429 1 incomplete-splice_match CNOT8 ENST00000285896.10 2528 7 1095 5 no_subtype FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2539.8 chr3 - 2669 3 antisense novelGene_MBNL1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 19 None 37 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3803.3 chr6 - 1697 10 novel_not_in_catalog HLA-C novel NA NA NA NA no_subtype TRUE non_canonical NA NA 83 None 3 20 2 TRUE 0 0 NA C coding 366 1098 11 1108 PB.3803.2 chr6 - 1709 11 fusion HLA-C,HLA-B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 98 None 15 21 2 TRUE 0 0 NA B coding 366 1098 26 1123 PB.3803.5 chr6 - 1539 9 fusion HLA-C,HLA-B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 98 None 1116 17 0 TRUE 0 0 NA B coding 366 1098 26 1123 PB.1845.14 chr2 - 7485 44 full-splice_match FN1 ENST00000357867.8 7898 44 0 413 no_subtype FALSE canonical NA NA 414 None 2 7 1 FALSE 0 0 NA C coding 2176 6528 267 6794 PB.3803.7 chr6 - 2361 7 fusion HLA-C,HLA-B novel NA NA NA NA no_subtype FALSE canonical NA NA 92 None 4 14 0 TRUE 0 0 NA B coding 116 348 20 367 PB.3803.6 chr6 - 1525 9 fusion HLA-C,HLA-B novel NA NA NA NA no_subtype TRUE canonical NA NA 83 None 8 14 2 TRUE 0 0 NA B coding 318 954 154 1107 PB.1100.1 chr1 - 2684 6 novel_not_in_catalog TRIM11 novel NA NA NA NA no_subtype FALSE canonical NA NA 658 None 50 2 1 FALSE 0 0 NA A coding 299 897 762 1658 PB.3803.8 chr6 - 1489 8 novel_not_in_catalog HLA-C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 76 None 4 15 3 TRUE 0 0 NA C coding 396 1188 4 1191 PB.1505.1 chr2 - 1459 5 full-splice_match TXNDC9 ENST00000264255.7 1637 5 131 47 no_subtype FALSE canonical NA NA 93 None 22 5 0 FALSE 0 0 NA A coding 226 678 126 803 PB.10235.3 chr20 - 2619 8 novel_not_in_catalog IDH3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 39 None 2 13 2 TRUE 0 0 NA C coding 205 615 455 1069 PB.10235.2 chr20 - 2099 12 novel_not_in_catalog IDH3B novel NA NA NA NA no_subtype FALSE canonical NA NA 47 None 5 5 0 FALSE 0 0 NA C coding 364 1092 12 1103 PB.10235.1 chr20 - 1529 12 full-splice_match IDH3B ENST00000380843.8 1545 12 10 6 no_subtype FALSE canonical NA NA 57 None 86 2 0 FALSE 0 0 NA C coding 385 1155 22 1176 PB.6429.10 chr11 + 1475 7 novel_in_catalog CAPN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 799 None 5 1 0 FALSE 0 0 NA C coding 305 915 41 955 PB.6429.11 chr11 + 3072 15 novel_in_catalog CAPN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2498 None 4 4 0 FALSE 0 0 NA C coding 456 1368 87 1454 PB.799.1 chr1 - 3597 11 novel_not_in_catalog F11R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 125 None 30 20 1 TRUE 0 0 NA C coding 299 897 62 958 PB.1511.1 chr2 + 1778 6 full-splice_match PDCL3 ENST00000264254.10 1337 6 309 -750 no_subtype FALSE canonical NA NA 646 None 80 17 0 FALSE 0 0 NA A coding 239 717 70 786 PB.5625.1 chr9 - 3132 2 genic_intron novelGene_1167 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1377 None 6 16 1 FALSE 0 0 NA A coding 119 357 720 1076 PB.8596.1 chr16 - 2061 2 full-splice_match SIAH1 ENST00000394725.2 2147 2 71 15 no_subtype FALSE canonical NA NA 176 None 3 13 0 FALSE 0 0 NA A coding 282 846 179 1024 PB.10373.1 chr20 + 2657 5 novel_not_in_catalog SNHG11 novel NA NA NA NA no_subtype TRUE canonical NA NA 1673 None 2 10 1 TRUE 0 0 NA A coding 116 348 2309 2656 PB.6758.1 chr12 + 4033 9 novel_not_in_catalog ADIPOR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1306 None 3 20 0 TRUE 0 0 NA B coding 296 888 545 1432 PB.610.1 chr1 + 3484 27 full-splice_match WDR3 ENST00000349139.5 9974 27 3 6487 no_subtype FALSE canonical NA NA 2720 None 10 2 0 FALSE 0 0 NA C coding 943 2829 45 2873 PB.6758.3 chr12 + 1454 1 genic_intron novelGene_16 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6758.2 chr12 + 3981 8 novel_in_catalog ADIPOR2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1262 None 13 13 0 FALSE 0 0 NA B coding 386 1158 231 1388 PB.6341.1 chr11 - 3151 1 genic_intron novelGene_568 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3044.1 chr4 + 1702 4 novel_not_in_catalog NOCT novel NA NA NA NA no_subtype TRUE canonical NA NA 1527 None 5 9 1 TRUE 0 0 NA B coding 431 1293 202 1494 PB.7894.1 chr14 + 5884 1 intergenic novelGene_868 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 29 0 FALSE 0 0 NA A coding 108 324 4458 4781 PB.2470.1 chr3 - 2703 6 novel_not_in_catalog ASTE1 novel NA NA NA NA no_subtype FALSE canonical NA NA 323 None 5 2 0 FALSE 0 0 NA A coding 679 2037 470 2506 PB.2500.1 chr3 + 2981 7 novel_not_in_catalog PXYLP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 622 None 2 7 0 TRUE 0 0 NA B coding 480 1440 115 1554 PB.10720.1 chr22 + 2718 5 full-splice_match TIMP3 ENST00000266085.6 4603 5 4 1881 no_subtype FALSE canonical NA NA 735 None 7 9 0 FALSE 0 0 NA C coding 211 633 298 930 PB.10720.2 chr22 + 3384 1 incomplete-splice_match TIMP3 ENST00000266085.6 4603 5 1214 6 no_subtype FALSE canonical NA NA NA None 4 26 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.110.1 chr1 + 3070 3 antisense novelGene_KIF17_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2616 None 4 20 1 FALSE 0 0 NA A coding 120 360 946 1305 PB.5605.1 chr9 + 2634 9 novel_not_in_catalog CACFD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1837 None 2 16 4 TRUE 0 0 NA B coding 172 516 63 578 PB.6850.1 chr12 - 3873 21 novel_not_in_catalog EPS8 novel NA NA NA NA no_subtype FALSE canonical NA NA 228 None 90 4 1 FALSE 0 0 NA B coding 683 2049 671 2719 PB.1524.1 chr2 + 3678 1 genic_intron novelGene_932 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA A coding 108 324 1348 1671 PB.1803.2 chr2 + 1535 13 incomplete-splice_match NOP58 ENST00000264279.9 2046 15 53 458 3prime_fragment FALSE canonical NA NA 1441 None 11 0 0 FALSE 0 0 NA B coding 454 1362 174 1535 PB.7977.1 chr15 + 5915 3 novel_not_in_catalog KLF13 novel NA NA NA NA no_subtype TRUE canonical NA NA 5332 None 7 21 1 TRUE 0 0 NA B coding 52 156 217 372 PB.7977.3 chr15 + 2555 2 novel_not_in_catalog KLF13 novel NA NA NA NA no_subtype FALSE canonical NA NA 1977 None 30 12 1 TRUE 0 0 NA B coding 118 354 2050 2403 PB.7977.2 chr15 + 6863 3 genic_intron novelGene_303 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3778 None 5 42 1 FALSE 0 0 NA A coding 157 471 1730 2200 PB.35.1 chr1 + 1214 5 full-splice_match THAP3 ENST00000307896.10 1046 5 25 -193 no_subtype FALSE canonical NA NA 448 None 2 4 0 FALSE 0 0 NA A coding 238 714 14 727 PB.702.3 chr1 + 3856 27 novel_in_catalog UBAP2L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3229 None 2 3 0 FALSE 0 0 NA C coding 1067 3201 65 3265 PB.2094.1 chr3 - 2508 15 full-splice_match LRRFIP2 ENST00000421276.6 2522 15 10 4 no_subtype FALSE canonical NA NA 268 None 3 6 0 FALSE 0 0 NA C coding 424 1272 391 1662 PB.995.1 chr1 + 5632 4 antisense novelGene_NUAK2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 138 None 3 26 2 FALSE 0 0 NA A coding 115 345 1090 1434 PB.3539.1 chr5 + 1543 6 novel_not_in_catalog ZMAT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 474 None 17 4 1 FALSE 0 0 NA A coding 123 369 247 615 PB.5397.9 chr9 - 1974 6 full-splice_match TRIM14 ENST00000341469.6 4454 6 -4 2484 no_subtype FALSE canonical NA NA 221 None 2 3 0 FALSE 0 0 NA C coding 442 1326 15 1340 PB.4467.3 chr7 + 2419 15 novel_in_catalog POR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1903 None 11 5 0 FALSE 0 0 NA B coding 680 2040 6 2045 PB.8497.3 chr16 - 2904 17 full-splice_match GGA2 ENST00000309859.8 5973 17 14 3055 no_subtype FALSE canonical NA NA 160 None 9 4 0 FALSE 0 0 NA C coding 613 1839 70 1908 PB.8497.2 chr16 - 3685 5 novel_not_in_catalog GGA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 48 None 2 15 1 TRUE 0 0 NA C coding 93 279 159 437 PB.4782.1 chr8 - 2702 2 genic_intron novelGene_43 novel NA NA NA NA no_subtype TRUE canonical NA NA 163 None 4 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.100.3 chr1 - 2725 1 genic_intron novelGene_178 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 10 18 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.100.2 chr1 - 1428 10 full-splice_match CAPZB ENST00000375142.5 1686 10 -25 283 no_subtype FALSE canonical NA NA 75 None 6 1 0 FALSE 0 0 NA C coding 277 831 73 903 PB.100.1 chr1 - 1024 9 full-splice_match CAPZB ENST00000264202.7 858 9 0 -166 no_subtype FALSE canonical NA NA 42 None 189 1 0 FALSE 0 0 NA C coding 272 816 40 855 PB.6077.6 chr10 - 5528 2 genic FAM53B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 19 None 2 31 0 TRUE 0 0 NA B coding 204 612 448 1059 PB.6077.5 chr10 - 2120 2 genic_intron novelGene_1089 novel NA NA NA NA no_subtype FALSE canonical NA NA 1206 None 3 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10528.1 chr21 - 1528 1 novel_in_catalog MIS18A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 7 0 FALSE 0 0 NA C coding 182 546 79 624 PB.6077.2 chr10 - 5473 4 novel_not_in_catalog FAM53B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 85 None 2 31 0 FALSE 0 0 NA B coding 300 900 623 1522 PB.6077.1 chr10 - 5490 4 novel_not_in_catalog FAM53B novel NA NA NA NA no_subtype FALSE canonical NA NA 101 None 11 30 0 FALSE 0 0 NA B coding 422 1266 276 1541 PB.2880.4 chr4 - 4113 12 novel_not_in_catalog G3BP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 86 None 2 6 0 TRUE 0 0 NA C coding 449 1347 122 1468 PB.10576.2 chr21 - 2107 1 novel_in_catalog ZBTB21 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10576.1 chr21 - 3864 2 full-splice_match ZBTB21 ENST00000398511.3 5608 2 39 1705 no_subtype FALSE canonical NA NA 97 None 2 7 0 FALSE 0 0 NA C coding 1066 3198 111 3308 PB.9503.1 chr18 - 2569 2 antisense novelGene_GREB1L_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1616 None 3 19 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5867.1 chr10 + 3782 3 novel_in_catalog RPS24 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 277 None 2 17 0 FALSE 0 0 NA A coding 119 357 35 391 PB.2805.1 chr4 - 1817 8 novel_not_in_catalog TMEM156 novel NA NA NA NA no_subtype FALSE canonical NA NA 125 None 3 8 0 TRUE 0 0 NA B coding 296 888 38 925 PB.702.6 chr1 + 3380 25 novel_in_catalog UBAP2L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2981 None 6 0 0 FALSE 0 0 NA C coding 982 2946 83 3028 PB.6817.1 chr12 - 1467 6 full-splice_match KLRB1 ENST00000229402.3 1448 6 -31 12 no_subtype FALSE canonical NA NA 163 None 2 6 0 FALSE 0 0 NA C coding 225 675 79 753 PB.6356.6 chr11 + 3044 12 novel_not_in_catalog CD6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1927 None 4 3 0 FALSE 0 0 NA C coding 626 1878 112 1989 PB.6817.3 chr12 - 2961 5 novel_in_catalog KLRB1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 163 None 4 11 0 FALSE 0 0 NA C coding 177 531 79 609 PB.5936.1 chr10 + 2852 1 novel_in_catalog ZNF518A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 11 0 FALSE 0 0 NA B coding 68 204 103 306 PB.9207.1 chr17 - 1517 14 novel_not_in_catalog SKAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 108 None 4 5 0 TRUE 0 0 NA A coding 359 1077 63 1139 PB.6356.2 chr11 + 3230 13 full-splice_match CD6 ENST00000313421.11 3252 13 18 4 no_subtype FALSE canonical NA NA 2110 None 42 5 0 FALSE 0 0 NA C coding 668 2004 169 2172 PB.6356.1 chr11 + 3151 14 novel_not_in_catalog CD6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2034 None 2 3 0 TRUE 0 0 NA C coding 667 2001 96 2096 PB.9207.2 chr17 - 1604 1 genic_intron novelGene_479 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1776.4 chr2 - 2820 1 novel_in_catalog ANKRD44 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.670.2 chr1 - 1307 5 full-splice_match CDC42SE1 ENST00000357235.5 3045 5 45 1693 no_subtype FALSE canonical NA NA 126 None 439 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5639.2 chr9 + 1602 14 novel_not_in_catalog NOXA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1432 None 11 5 0 FALSE 0 0 NA B coding 476 1428 139 1566 PB.6038.6 chr10 + 1014 1 antisense novelGene_ABLIM1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.348.8 chr1 - 3927 2 novel_in_catalog MKNK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 67 None 2 37 0 FALSE 0 0 NA C coding 101 303 2631 2933 PB.9174.1 chr17 - 3311 28 full-splice_match EFTUD2 ENST00000426333.6 4548 28 260 977 no_subtype FALSE canonical NA NA 34 None 97 3 0 FALSE 0 0 NA C coding 972 2916 39 2954 PB.1641.1 chr2 - 1461 8 full-splice_match NMI ENST00000243346.9 1623 8 154 8 no_subtype TRUE canonical NA NA 311 None 4 6 0 FALSE 0 0 NA A coding 307 921 318 1238 PB.9174.3 chr17 - 3420 29 novel_not_in_catalog EFTUD2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 59 None 8 4 1 TRUE 0 0 NA C coding 972 2916 146 3061 PB.533.2 chr1 + 2781 15 novel_not_in_catalog GPSM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2073 None 2 10 0 TRUE 0 0 NA B coding 684 2052 251 2302 PB.10363.1 chr20 - 2988 16 full-splice_match NDRG3 ENST00000349004.5 2964 16 -33 9 no_subtype FALSE canonical NA NA 67 None 14 9 0 FALSE 0 0 NA A coding 375 1125 116 1240 PB.2425.3 chr3 - 3057 12 novel_not_in_catalog PARP9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 73 None 4 2 0 TRUE 0 0 NA B coding 819 2457 163 2619 PB.5619.1 chr9 - 2826 2 novel_not_in_catalog CAMSAP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 406 None 4 19 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.1859.7 chr2 + 2899 6 novel_in_catalog SLC11A1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1902 None 2 19 0 FALSE 0 0 NA C coding 101 303 1879 2181 PB.10594.1 chr21 + 1581 7 full-splice_match C21orf33 ENST00000291577.10 1674 7 78 15 no_subtype FALSE canonical NA NA 693 None 14 6 0 FALSE 0 0 NA A coding 268 804 16 819 PB.2583.1 chr3 - 3731 2 genic_intron novelGene_1310 novel NA NA NA NA no_subtype FALSE canonical NA NA 2865 None 5 31 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2433.3 chr3 + 1653 16 novel_in_catalog PDIA5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1438 None 2 1 0 FALSE 0 0 NA C coding 423 1269 248 1516 PB.2433.2 chr3 + 2991 1 novel_in_catalog PDIA5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA C coding 103 309 227 535 PB.6483.4 chr11 - 3437 20 novel_not_in_catalog PITPNM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 77 None 5 2 1 FALSE 0 0 NA B coding 651 1953 1221 3173 PB.1361.1 chr2 - 3912 20 novel_in_catalog USP34 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 77 None 2 7 0 FALSE 0 0 NA B coding 1078 3234 39 3272 PB.3243.9 chr5 + 6278 8 novel_not_in_catalog PARP8 novel NA NA NA NA no_subtype FALSE canonical NA NA 5206 None 2 56 2 TRUE 0 0 NA C coding 182 546 4674 5219 PB.5308.1 chr9 + 2922 2 novel_not_in_catalog ALDH1B1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 33 None 4 8 1 TRUE 0 0 NA B coding 517 1551 46 1596 PB.7927.1 chr14 - 3820 2 antisense novelGene_PPP2R5C_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 400 None 2 20 1 FALSE 0 0 NA A coding 112 336 3209 3544 PB.318.1 chr1 + 5507 26 novel_not_in_catalog SZT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4687 None 2 16 2 TRUE 0 0 NA A coding 804 2412 2417 4828 PB.8352.1 chr16 + 1299 7 full-splice_match STUB1 ENST00000219548.8 1472 7 121 52 no_subtype FALSE canonical NA NA 915 None 4 4 0 FALSE 0 0 NA C coding 303 909 130 1038 PB.7367.1 chr12 + 2417 7 full-splice_match RAN ENST00000543796.5 2661 7 214 30 no_subtype FALSE canonical NA NA 650 None 20 16 0 FALSE 0 0 NA A coding 216 648 45 692 PB.8352.2 chr16 + 1422 7 novel_not_in_catalog STUB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1044 None 2 4 0 FALSE 0 0 NA C coding 231 693 475 1167 PB.6067.1 chr10 + 2705 11 full-splice_match ACADSB ENST00000358776.6 5859 11 -18 3172 no_subtype FALSE canonical NA NA 1260 None 71 9 0 FALSE 0 0 NA A coding 432 1296 33 1328 PB.5227.1 chr9 + 2193 11 novel_not_in_catalog SNAPC3 novel NA NA NA NA no_subtype TRUE canonical NA NA 1686 None 9 15 1 TRUE 0 0 NA A coding 411 1233 4 1236 PB.1536.1 chr2 + 3281 10 full-splice_match LIMS1 ENST00000544547.5 4461 10 84 1096 no_subtype FALSE canonical NA NA 1023 None 2 15 0 FALSE 0 0 NA C coding 337 1011 125 1135 PB.5803.9 chr10 - 2518 1 genic_intron novelGene_601 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 14 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9662.1 chr19 - 3042 6 novel_not_in_catalog ZNF77 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 110 None 2 17 1 TRUE 0 0 NA A coding 545 1635 108 1742 PB.10512.1 chr21 - 3604 20 novel_not_in_catalog APP novel NA NA NA NA no_subtype TRUE canonical NA NA 232 None 2 8 0 TRUE 0 0 NA C coding 770 2310 176 2485 PB.5803.6 chr10 - 6212 14 novel_in_catalog JMJD1C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 587 None 2 3 0 FALSE 0 0 NA B coding 1802 5406 806 6211 PB.10512.3 chr21 - 3192 16 novel_in_catalog APP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 182 None 3 5 0 FALSE 0 0 NA C coding 733 2199 126 2324 PB.10512.2 chr21 - 3289 17 full-splice_match APP ENST00000357903.7 3543 17 18 236 no_subtype FALSE canonical NA NA 206 None 9 6 0 FALSE 0 0 NA C coding 751 2253 150 2402 PB.10512.5 chr21 - 3250 17 full-splice_match APP ENST00000358918.7 2366 17 -84 -800 no_subtype FALSE canonical NA NA 188 None 2 14 1 FALSE 0 0 NA C coding 752 2256 132 2387 PB.4404.2 chr7 - 3130 7 novel_not_in_catalog NUDCD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 217 None 82 10 0 TRUE 0 0 NA B coding 361 1083 26 1108 PB.10512.7 chr21 - 1613 7 novel_not_in_catalog APP novel NA NA NA NA no_subtype FALSE canonical NA NA 88 None 2 5 1 TRUE 0 0 NA C coding 236 708 50 757 PB.10512.6 chr21 - 3100 18 novel_not_in_catalog APP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 207 None 2 11 1 TRUE 0 0 NA C coding 361 1083 1158 2240 PB.4376.22 chr7 - 5970 1 novel_in_catalog ELMO1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 41 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6368.1 chr11 - 1521 3 novel_not_in_catalog TMEM258 novel NA NA NA NA no_subtype FALSE canonical NA NA 52 None 2 10 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.6807.8 chr12 - 3065 10 full-splice_match SLC2A3 ENST00000075120.11 3915 10 88 762 no_subtype FALSE canonical NA NA 168 None 149 8 0 FALSE 0 0 NA A coding 496 1488 154 1641 PB.4376.21 chr7 - 1542 12 novel_not_in_catalog ELMO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 2 5 0 TRUE 0 0 NA B coding 283 849 124 972 PB.9723.2 chr19 + 2060 18 novel_in_catalog STXBP2 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 1913 None 3 6 0 FALSE 0 0 NA B coding 410 1230 767 1996 PB.9723.3 chr19 + 1423 15 novel_not_in_catalog STXBP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1278 None 2 3 0 TRUE 0 0 NA B coding 442 1326 36 1361 PB.8804.1 chr16 + 1698 15 full-splice_match CTU2 ENST00000453996.6 1751 15 42 11 no_subtype FALSE canonical NA NA 1504 None 5 4 0 FALSE 0 0 NA C coding 515 1545 27 1571 PB.9723.1 chr19 + 1804 18 incomplete-splice_match STXBP2 ENST00000221283.9 1876 19 68 4 internal_fragment FALSE canonical NA NA 1659 None 81 0 0 FALSE 0 0 NA B coding 561 1683 60 1742 PB.5128.3 chr8 + 3192 27 novel_not_in_catalog EFR3A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2954 None 2 7 2 TRUE 0 0 NA B coding 785 2355 192 2546 PB.6807.3 chr12 - 3462 11 novel_not_in_catalog SLC2A14 novel NA NA NA NA no_subtype FALSE canonical NA NA 113 None 2 13 0 FALSE 0 0 NA B coding 497 1491 171 1661 PB.5128.1 chr8 + 3232 25 novel_not_in_catalog EFR3A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2993 None 88 6 2 TRUE 0 0 NA B coding 821 2463 123 2585 PB.6807.1 chr12 - 2933 11 novel_not_in_catalog SLC2A14 novel NA NA NA NA no_subtype FALSE canonical NA NA 49 None 20 10 0 FALSE 0 0 NA B coding 497 1491 107 1597 PB.6807.7 chr12 - 3522 12 novel_not_in_catalog SLC2A14 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 172 None 2 15 0 TRUE 0 0 NA B coding 497 1491 254 1744 PB.348.4 chr1 - 2636 13 full-splice_match MKNK1 ENST00000371945.8 2618 13 -21 3 no_subtype FALSE canonical NA NA 74 None 23 13 0 FALSE 0 0 NA C coding 424 1272 209 1480 PB.8060.1 chr15 + 841 4 full-splice_match C15orf48 ENST00000344300.3 875 4 4 30 no_subtype FALSE canonical NA NA 369 None 4 0 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7377.2 chr12 + 2753 6 novel_not_in_catalog ZNF140 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 842 None 6 14 0 TRUE 0 0 NA B coding 354 1062 920 1981 PB.474.1 chr1 + 2732 3 full-splice_match LRRC8C ENST00000370454.8 7218 3 99 4387 no_subtype FALSE canonical NA NA 294 None 25 2 0 FALSE 0 0 NA C coding 803 2409 157 2565 PB.2497.2 chr3 - 3451 3 genic RN7SL724P novel NA NA NA NA no_subtype FALSE canonical NA NA 356 None 2 24 2 FALSE 0 0 NA A coding 142 426 1706 2131 PB.348.7 chr1 - 2651 1 novel_in_catalog MKNK1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6116.4 chr11 + 1613 2 genic_intron novelGene_10 novel NA NA NA NA no_subtype FALSE canonical NA NA 1462 None 4 13 0 FALSE 0 0 NA A coding 8 24 318 341 PB.17.1 chr1 + 3011 7 full-splice_match RER1 ENST00000605895.5 3044 7 30 3 no_subtype FALSE canonical NA NA 604 None 40 32 0 FALSE 0 0 NA A coding 196 588 104 691 PB.10495.1 chr21 - 3108 21 full-splice_match CH507-9B2.5 ENST00000617716.3 3264 21 20 136 no_subtype FALSE canonical NA NA 92 None 3 3 0 FALSE 0 0 NA A coding 919 2757 75 2831 PB.3936.3 chr6 + 2493 9 novel_not_in_catalog TJAP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 713 None 3 13 1 FALSE 0 0 NA B coding 547 1641 165 1805 PB.9658.1 chr19 + 1368 4 full-splice_match GADD45B ENST00000215631.8 1373 4 0 5 no_subtype FALSE canonical NA NA 601 None 33 6 0 FALSE 0 0 NA C coding 160 480 233 712 PB.6009.1 chr10 - 2562 4 novel_not_in_catalog CALHM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 253 None 2 11 0 FALSE 0 0 NA A coding 323 969 1232 2200 PB.9658.2 chr19 + 1510 1 full-splice_match GADD45B ENST00000586759.1 517 1 5 -998 no_subtype FALSE canonical NA NA NA None 6 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7961.1 chr15 + 3731 6 novel_not_in_catalog NIPA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3232 None 5 22 1 TRUE 0 0 NA A coding 254 762 192 953 PB.2441.2 chr3 - 2795 15 novel_not_in_catalog MUC13 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 86 None 117 14 3 TRUE 0 0 NA B coding 489 1467 35 1501 PB.3040.1 chr4 - 2884 2 novel_not_in_catalog PGRMC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 437 None 24 22 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.10066.1 chr19 + 1920 2 full-splice_match FOXA3 ENST00000302177.2 1989 2 66 3 no_subtype FALSE canonical NA NA 200 None 5 4 0 FALSE 0 0 NA A coding 350 1050 132 1181 PB.227.8 chr1 + 2103 13 full-splice_match LCK ENST00000619559.4 2099 13 -13 9 no_subtype FALSE canonical NA NA 1461 None 4 4 0 FALSE 0 0 NA C coding 509 1527 135 1661 PB.5013.1 chr8 - 3692 10 novel_not_in_catalog CDH17 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 73 None 3 16 0 TRUE 0 0 NA C coding 356 1068 94 1161 PB.227.5 chr1 + 2613 10 novel_in_catalog LCK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1965 None 8 7 0 FALSE 0 0 NA C coding 249 747 1419 2165 PB.227.4 chr1 + 2491 11 novel_in_catalog LCK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1849 None 3 9 0 FALSE 0 0 NA C coding 249 747 1303 2049 PB.227.7 chr1 + 1457 9 novel_in_catalog LCK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 861 None 2 4 0 FALSE 0 0 NA C coding 408 1224 78 1301 PB.227.6 chr1 + 2260 12 novel_in_catalog LCK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1612 None 2 3 0 FALSE 0 0 NA C coding 567 1701 112 1812 PB.227.1 chr1 + 2089 13 full-splice_match LCK ENST00000336890.9 2117 13 27 1 no_subtype FALSE canonical NA NA 1438 None 62 2 0 FALSE 0 0 NA C coding 509 1527 112 1638 PB.3345.1 chr5 + 2846 18 novel_not_in_catalog PAPD4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1766 None 24 9 2 TRUE 0 0 NA B coding 484 1452 387 1838 PB.3345.2 chr5 + 2849 18 novel_not_in_catalog PAPD4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1769 None 2 9 1 TRUE 0 0 NA B coding 230 690 398 1087 PB.3345.3 chr5 + 2912 19 novel_not_in_catalog PAPD4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1837 None 3 20 2 TRUE 0 0 NA B coding 484 1452 458 1909 PB.4734.2 chr7 + 2778 6 novel_not_in_catalog ZNF212 novel NA NA NA NA no_subtype TRUE canonical NA NA 747 None 31 8 0 FALSE 0 0 NA C coding 495 1485 117 1601 PB.5013.3 chr8 - 3158 18 full-splice_match CDH17 ENST00000027335.7 3693 18 27 508 no_subtype FALSE canonical NA NA 78 None 157 5 0 FALSE 0 0 NA C coding 832 2496 99 2594 PB.5744.1 chr10 + 1694 1 novel_in_catalog CREM novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8799.2 chr16 + 3700 19 full-splice_match ZC3H18 ENST00000452588.6 3211 19 70 -559 no_subtype FALSE canonical NA NA 2843 None 9 21 2 FALSE 0 0 NA C coding 977 2931 109 3039 PB.877.2 chr1 - 2595 2 genic_intron novelGene_1329 novel NA NA NA NA no_subtype FALSE canonical NA NA 518 None 3 24 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5353.18 chr9 - 6032 28 novel_not_in_catalog ZCCHC6 novel NA NA NA NA no_subtype FALSE canonical NA NA 140 None 2 14 2 FALSE 0 0 NA C coding 767 2301 2426 4726 PB.877.4 chr1 - 3069 2 antisense novelGene_RABGAP1L-IT1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 629 None 10 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8799.3 chr16 + 3762 19 novel_not_in_catalog ZC3H18 novel NA NA NA NA no_subtype FALSE canonical NA NA 2900 None 3 17 1 FALSE 0 0 NA C coding 680 2040 1057 3096 PB.4322.1 chr7 - 1750 1 full-splice_match EEF1A1P6 ENST00000434005.1 1384 1 -63 -303 no_subtype FALSE canonical NA NA NA None 17 1 0 FALSE 0 0 NA A coding 262 786 663 1448 PB.5013.7 chr8 - 3874 19 novel_not_in_catalog CDH17 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 42 None 2 11 1 TRUE 0 0 NA C coding 832 2496 317 2812 PB.5237.1 chr9 + 2825 1 genic_intron novelGene_198 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2183.7 chr3 - 3399 11 novel_not_in_catalog DALRD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 660 None 2 25 0 FALSE 0 0 NA B coding 286 858 1532 2389 PB.2183.6 chr3 - 3070 12 novel_not_in_catalog DALRD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 660 None 2 17 0 FALSE 0 0 NA B coding 482 1446 1532 2977 PB.2183.5 chr3 - 3253 13 novel_not_in_catalog DALRD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 660 None 2 18 0 FALSE 0 0 NA B coding 543 1629 1532 3160 PB.2183.4 chr3 - 3413 11 novel_not_in_catalog DALRD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 660 None 4 23 0 FALSE 0 0 NA B coding 387 1161 1532 2692 PB.2183.3 chr3 - 3325 12 novel_not_in_catalog DALRD3 novel NA NA NA NA no_subtype TRUE canonical NA NA 660 None 3 18 0 FALSE 0 0 NA B coding 483 1449 1532 2980 PB.2183.2 chr3 - 3287 12 novel_not_in_catalog DALRD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 660 None 4 17 0 FALSE 0 0 NA B coding 217 651 2587 3237 PB.11027.5 chrX + 5679 1 genic_intron novelGene_679 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 36 0 FALSE 0 0 NA A coding 139 417 3769 4185 PB.11027.4 chrX + 1250 1 genic_intron novelGene_678 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9108.1 chr17 + 3860 14 full-splice_match CASC3 ENST00000264645.11 4116 14 235 21 no_subtype FALSE canonical NA NA 2144 None 86 8 0 FALSE 0 0 NA C coding 397 1191 910 2100 PB.8135.1 chr15 + 1505 1 antisense novelGene_HERC1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2525.2 chr3 - 2863 7 full-splice_match WWTR1 ENST00000360632.7 2103 7 96 -856 no_subtype FALSE canonical NA NA 241 None 2 3 0 FALSE 0 0 NA A coding 400 1200 245 1444 PB.8799.4 chr16 + 2837 7 novel_not_in_catalog ZC3H18 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1975 None 3 21 2 TRUE 0 0 NA C coding 223 669 1503 2171 PB.6897.1 chr12 + 2643 2 novel_in_catalog KIAA1551 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 80 None 3 22 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.2944.1 chr4 - 3078 16 novel_in_catalog ABCG2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 550 None 4 9 0 FALSE 0 0 NA A coding 655 1965 570 2534 PB.6897.3 chr12 + 6009 6 novel_not_in_catalog KIAA1551 novel NA NA NA NA no_subtype FALSE canonical NA NA 5283 None 6 12 2 TRUE 0 0 NA B coding 1154 3462 209 3670 PB.10655.2 chr22 + 1756 4 full-splice_match UBE2L3 ENST00000342192.8 3028 4 173 1099 no_subtype FALSE canonical NA NA 335 None 50 3 0 FALSE 0 0 NA C coding 154 462 26 487 PB.6897.5 chr12 + 2507 2 novel_in_catalog KIAA1551 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 96 None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6897.4 chr12 + 3747 4 incomplete-splice_match KIAA1551 ENST00000312561.8 6230 6 1 2482 3prime_fragment FALSE canonical NA NA 335 None 2 5 1 FALSE 0 0 NA B coding 1111 3333 414 3746 PB.6897.7 chr12 + 3779 2 novel_not_in_catalog KIAA1551 novel NA NA NA NA no_subtype FALSE canonical NA NA 3070 None 2 5 1 TRUE 0 0 NA B coding 1031 3093 1 3093 PB.6897.6 chr12 + 3576 4 novel_not_in_catalog KIAA1551 novel NA NA NA NA no_subtype FALSE canonical NA NA 2849 None 12 11 1 TRUE 0 0 NA B coding 568 1704 1301 3004 PB.6991.22 chr12 - 3744 14 novel_in_catalog ITGB7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 50 None 2 8 0 FALSE 0 0 NA C coding 359 1077 802 1878 PB.7063.1 chr12 + 1684 6 full-splice_match TSPAN31 ENST00000257910.7 1849 6 172 -7 no_subtype FALSE canonical NA NA 660 None 29 10 0 FALSE 0 0 NA A coding 210 630 103 732 PB.1414.1 chr2 + 1414 3 full-splice_match SPR ENST00000234454.5 1480 3 65 1 no_subtype FALSE canonical NA NA 603 None 32 2 0 FALSE 0 0 NA A coding 261 783 9 791 PB.11201.3 chrX - 3347 10 novel_not_in_catalog HCFC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 38 None 2 10 1 TRUE 0 0 NA B coding 444 1332 231 1562 PB.2176.2 chr3 - 2936 14 novel_not_in_catalog NCKIPSD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 249 None 3 8 2 TRUE 0 0 NA B coding 599 1797 442 2238 PB.6576.4 chr11 - 3637 20 full-splice_match PICALM ENST00000393346.7 2340 20 -173 -1124 no_subtype FALSE canonical NA NA 452 None 3 5 1 FALSE 0 0 NA C coding 652 1956 323 2278 PB.2176.1 chr3 - 2931 13 novel_not_in_catalog NCKIPSD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 254 None 40 6 1 TRUE 0 0 NA B coding 717 2151 83 2233 PB.3757.1 chr6 + 1437 10 novel_not_in_catalog GMPR novel NA NA NA NA no_subtype TRUE canonical NA NA 906 None 4 7 1 TRUE 0 0 NA A coding 345 1035 50 1084 PB.7122.1 chr12 + 3472 1 genic_intron novelGene_676 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 24 0 FALSE 0 0 NA A coding 101 303 2400 2702 PB.10401.1 chr20 + 1863 6 full-splice_match YWHAB ENST00000353703.8 3049 6 104 1082 no_subtype FALSE canonical NA NA 794 None 101 1 0 FALSE 0 0 NA C coding 246 738 111 848 PB.10401.2 chr20 + 3088 5 novel_in_catalog YWHAB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2969 None 15 16 0 FALSE 0 0 NA C coding 147 441 127 567 PB.10401.3 chr20 + 1574 7 novel_not_in_catalog YWHAB novel NA NA NA NA no_subtype FALSE canonical NA NA 1456 None 2 4 0 FALSE 0 0 NA C coding 132 396 156 551 PB.10042.1 chr19 + 3039 7 novel_not_in_catalog ZNF227 novel NA NA NA NA no_subtype FALSE canonical NA NA 486 None 2 2 0 TRUE 0 0 NA A coding 799 2397 216 2612 PB.10317.1 chr20 + 2507 1 novel_in_catalog TM9SF4 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 18 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5522.1 chr9 - 3846 14 full-splice_match FAM129B ENST00000373312.3 3957 14 106 5 no_subtype FALSE canonical NA NA 163 None 49 11 0 FALSE 0 0 NA A coding 746 2238 109 2346 PB.1234.2 chr2 + 7333 43 novel_in_catalog CAD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 6970 None 2 13 0 FALSE 0 0 NA C coding 1460 4380 171 4550 PB.1234.1 chr2 + 7139 44 full-splice_match CAD ENST00000264705.8 7265 44 -28 154 no_subtype FALSE canonical NA NA 6765 None 6 2 0 FALSE 0 0 NA C coding 2225 6675 191 6865 PB.2473.2 chr3 + 2708 16 incomplete-splice_match DNAJC13 ENST00000260818.10 7730 56 5019 3 internal_fragment TRUE canonical NA NA 1854 None 2 4 0 FALSE 0 0 NA A coding 632 1896 63 1958 PB.7368.2 chr12 + 3006 17 novel_in_catalog SFSWAP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2694 None 2 2 0 FALSE 0 0 NA C coding 874 2622 136 2757 PB.859.1 chr1 - 2855 13 novel_not_in_catalog SCYL3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 108 None 18 13 1 TRUE 0 0 NA A coding 334 1002 1220 2221 PB.3291.1 chr5 + 1516 14 full-splice_match CWC27 ENST00000381070.7 2078 14 93 469 no_subtype FALSE canonical NA NA 1380 None 2 2 0 FALSE 0 0 NA C coding 464 1392 125 1516 PB.7481.1 chr13 - 1391 7 full-splice_match MED4 ENST00000258648.6 2022 7 0 631 no_subtype FALSE canonical NA NA 151 None 39 5 0 FALSE 0 0 NA C coding 270 810 27 836 PB.6598.1 chr11 - 3535 10 full-splice_match SESN3 ENST00000536441.6 9558 10 -5 6028 no_subtype FALSE canonical NA NA 420 None 3 14 0 FALSE 0 0 NA A coding 492 1476 343 1818 PB.7728.2 chr14 + 1640 4 novel_not_in_catalog AP5M1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 985 None 2 6 1 TRUE 0 0 NA B coding 321 963 266 1228 PB.7238.1 chr12 + 2784 12 novel_not_in_catalog MVK novel NA NA NA NA no_subtype TRUE canonical NA NA 1106 None 10 18 0 TRUE 0 0 NA A coding 396 1188 68 1255 PB.10911.1 chrX + 3154 5 full-splice_match LANCL3 ENST00000378619.3 3063 5 9 -100 no_subtype FALSE canonical NA NA 1313 None 2 7 0 FALSE 0 0 NA A coding 420 1260 211 1470 PB.245.1 chr1 + 1619 2 full-splice_match GJA4 ENST00000342280.4 1622 2 -1 4 no_subtype FALSE canonical NA NA 72 None 6 5 0 FALSE 0 0 NA A coding 333 999 90 1088 PB.797.2 chr1 - 2981 6 novel_in_catalog ITLN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 110 None 6 14 0 FALSE 0 0 NA C coding 235 705 117 821 PB.10475.1 chr20 - 6078 35 novel_in_catalog LAMA5 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 176 None 2 14 0 FALSE 0 0 NA A coding 1076 3228 2582 5809 PB.7266.2 chr12 - 2628 22 incomplete-splice_match NAA25 ENST00000261745.8 6010 24 226 3156 internal_fragment FALSE canonical NA NA 81 None 24 0 0 FALSE 0 0 NA B coding 868 2604 24 2627 PB.7266.3 chr12 - 3886 22 novel_in_catalog NAA25 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 79 None 2 14 1 FALSE 0 0 NA B coding 590 1770 22 1791 PB.8141.3 chr15 + 2694 1 novel_in_catalog SNX1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8141.2 chr15 + 2694 3 novel_not_in_catalog SNX1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2482 None 16 13 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.8637.1 chr16 + 3265 4 novel_not_in_catalog CX3CL1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2554 None 18 11 0 TRUE 0 0 NA A coding 397 1191 77 1267 PB.3529.1 chr5 - 2242 11 novel_in_catalog APBB3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 124 None 2 2 0 FALSE 0 0 NA A coding 209 627 76 702 PB.3069.1 chr4 + 2547 1 full-splice_match RP11-142A22.3,RTN3P1 ENST00000624774.1 1049 1 -1498 0 no_subtype FALSE canonical NA NA NA None 11 17 0 FALSE 0 0 NA A coding 236 708 133 840 PB.9946.2 chr19 - 3130 1 genic_intron novelGene_351 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2255.1 chr3 + 3061 17 novel_in_catalog CCDC66 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2795 None 2 11 0 FALSE 0 0 NA C coding 914 2742 138 2879 PB.10409.1 chr20 + 6592 2 antisense novelGene_TP53TG5_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 3393 None 3 40 1 FALSE 0 0 NA A coding 123 369 2632 3000 PB.2255.2 chr3 + 3042 18 full-splice_match CCDC66 ENST00000394672.7 3096 18 54 0 no_subtype FALSE canonical NA NA 2776 None 3 4 0 FALSE 0 0 NA C coding 948 2844 17 2860 PB.5871.1 chr10 + 5821 17 novel_not_in_catalog ZMIZ1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3726 None 2 23 1 TRUE 0 0 NA A coding 749 2247 15 2261 PB.570.1 chr1 + 2082 5 full-splice_match WNT2B ENST00000369684.4 3818 5 189 1547 no_subtype FALSE canonical NA NA 1242 None 2 8 0 FALSE 0 0 NA A coding 391 1173 297 1469 PB.6013.1 chr10 - 3349 2 antisense novelGene_SLK_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2745 None 16 13 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.5255.2 chr9 - 4208 18 novel_not_in_catalog DDX58 novel NA NA NA NA no_subtype TRUE canonical NA NA 127 None 2 12 0 FALSE 0 0 NA B coding 923 2769 22 2790 PB.5255.3 chr9 - 2326 16 incomplete-splice_match DDX58 ENST00000379883.2 4353 18 72 1955 internal_fragment FALSE canonical NA NA 192 None 2 2 0 FALSE 0 0 NA B coding 746 2238 87 2324 PB.6455.7 chr11 - 2720 2 genic_intron novelGene_624 novel NA NA NA NA no_subtype FALSE canonical NA NA 2426 None 4 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1582.4 chr2 - 2736 1 genic_intron novelGene_1098 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8266.1 chr15 - 1558 9 novel_not_in_catalog WDR73 novel NA NA NA NA no_subtype TRUE canonical NA NA 48 None 4 2 0 TRUE 0 0 NA A coding 378 1134 8 1141 PB.7073.1 chr12 - 2873 1 incomplete-splice_match AVPR1A ENST00000299178.3 5963 2 3086 5 no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.996.4 chr1 - 5523 1 novel_in_catalog NUAK2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA B coding 129 387 2659 3045 PB.6977.1 chr12 + 1861 4 full-splice_match DAZAP2 ENST00000412716.7 2598 4 592 145 no_subtype FALSE canonical NA NA 402 None 430 2 0 FALSE 0 0 NA C coding 168 504 25 528 PB.10415.1 chr20 + 3108 3 novel_not_in_catalog ZSWIM1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1868 None 6 12 0 TRUE 0 0 NA A coding 485 1455 114 1568 PB.1397.1 chr2 + 3557 14 full-splice_match GMCL1 ENST00000282570.3 4191 14 78 556 no_subtype FALSE canonical NA NA 1625 None 15 4 0 FALSE 0 0 NA A coding 515 1545 174 1718 PB.1214.1 chr2 + 1674 7 full-splice_match UBXN2A ENST00000309033.4 6066 7 41 4351 no_subtype FALSE canonical NA NA 787 None 2 17 0 FALSE 0 0 NA A coding 259 777 204 980 PB.3747.1 chr6 + 3686 9 novel_in_catalog SIRT5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 926 None 3 13 0 FALSE 0 0 NA A coding 310 930 70 999 PB.3861.1 chr6 - 2842 1 incomplete-splice_match C6orf106 ENST00000374026.7 4232 4 1383 8 no_subtype FALSE canonical NA NA NA None 6 7 0 FALSE 0 0 NA B coding 100 300 2526 2825 PB.3861.2 chr6 - 3715 3 incomplete-splice_match C6orf106 ENST00000374023.7 4418 5 693 10 5prime_fragment FALSE canonical NA NA 62 None 4 10 0 FALSE 0 0 NA B coding 145 435 11 445 PB.6413.1 chr11 - 2915 32 full-splice_match MAP4K2 ENST00000294066.6 7178 32 77 4186 no_subtype FALSE canonical NA NA 111 None 18 1 0 FALSE 0 0 NA C coding 820 2460 16 2475 PB.5127.1 chr8 - 1652 1 genic_intron novelGene_1123 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6413.3 chr11 - 2912 32 full-splice_match MAP4K2 ENST00000377350.7 2931 32 56 -37 no_subtype FALSE canonical NA NA 132 None 3 3 0 FALSE 0 0 NA C coding 812 2436 37 2472 PB.3704.3 chr5 + 3385 6 novel_not_in_catalog TRIM41 novel NA NA NA NA no_subtype FALSE canonical NA NA 3033 None 2 22 1 TRUE 0 0 NA B coding 391 1173 304 1476 PB.6413.6 chr11 - 2848 33 novel_not_in_catalog MAP4K2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 119 None 2 7 2 TRUE 0 0 NA C coding 447 1341 24 1364 PB.8570.3 chr16 + 6371 1 full-splice_match ZNF646 ENST00000394979.2 8118 1 1214 533 no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA C coding 1551 4653 44 4696 PB.2042.2 chr3 + 2563 1 antisense novelGene_SATB1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2042.1 chr3 - 3067 1 incomplete-splice_match SATB1 ENST00000338745.10 7810 11 4322 422 no_subtype FALSE canonical NA NA NA None 11 26 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5229.4 chr9 - 2635 1 novel_in_catalog PSIP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8464.1 chr16 + 1718 1 genic_intron novelGene_158 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5229.1 chr9 - 2757 17 novel_not_in_catalog PSIP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 156 None 16 9 0 TRUE 0 0 NA B coding 530 1590 295 1884 PB.469.2 chr1 - 2523 11 fusion GBP3,GBP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 44 None 5 11 1 TRUE 0 0 NA B coding 271 813 1602 2414 PB.755.2 chr1 - 6603 25 novel_not_in_catalog ARHGEF11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 68 None 2 31 2 TRUE 0 0 NA B coding 302 906 2711 3616 PB.5229.2 chr9 - 3052 8 novel_not_in_catalog PSIP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1014 None 2 23 1 TRUE 0 0 NA B coding 181 543 1023 1565 PB.459.1 chr1 + 2029 5 full-splice_match CYR61 ENST00000451137.6 2290 5 0 261 no_subtype FALSE canonical NA NA 1067 None 2 4 0 FALSE 0 0 NA A coding 381 1143 225 1367 PB.8795.1 chr16 - 5464 9 novel_not_in_catalog FBXO31 novel NA NA NA NA no_subtype TRUE canonical NA NA 51 None 2 45 0 TRUE 0 0 NA A coding 367 1101 79 1179 PB.7794.2 chr14 - 4424 12 full-splice_match ZFYVE1 ENST00000556143.5 4485 12 60 1 no_subtype FALSE canonical NA NA 227 None 8 10 0 FALSE 0 0 NA A coding 777 2331 662 2992 PB.7500.1 chr13 + 1322 11 novel_not_in_catalog RNASEH2B novel NA NA NA NA no_subtype FALSE canonical NA NA 798 None 2 4 0 TRUE 0 0 NA A coding 254 762 67 828 PB.7826.1 chr14 + 906 4 novel_not_in_catalog BATF novel NA NA NA NA no_subtype FALSE canonical NA NA 387 None 2 1 0 TRUE 0 0 NA A coding 125 375 217 591 PB.1855.1 chr2 + 3028 2 novel_not_in_catalog ARPC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 454 None 36 19 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.7959.59 chr14 - 1496 6 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 2 13 2 TRUE 0 0 NA B coding 458 1374 77 1450 PB.7959.58 chr14 - 1500 7 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 14 3 TRUE 0 0 NA B coding 130 390 11 400 PB.7475.8 chr13 - 2706 15 novel_not_in_catalog KIAA0226L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 101 None 2 19 2 FALSE 0 0 NA B coding 662 1986 302 2287 PB.7475.9 chr13 - 2711 15 novel_not_in_catalog KIAA0226L novel NA NA NA NA no_subtype FALSE canonical NA NA 102 None 8 6 0 FALSE 0 0 NA B coding 647 1941 225 2165 PB.4987.1 chr8 - 1725 7 novel_not_in_catalog IL7 novel NA NA NA NA no_subtype FALSE canonical NA NA 545 None 7 1 0 TRUE 0 0 NA B coding 177 531 536 1066 PB.7959.54 chr14 - 1533 7 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 3 15 2 TRUE 0 0 NA B coding 251 753 734 1486 PB.378.2 chr1 - 1604 10 novel_in_catalog YIPF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 90 None 12 0 0 FALSE 0 0 NA C coding 306 918 140 1057 PB.7475.5 chr13 - 2628 14 novel_in_catalog KIAA0226L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 101 None 6 8 0 FALSE 0 0 NA B coding 662 1986 224 2209 PB.7475.2 chr13 - 2468 14 novel_not_in_catalog KIAA0226L novel NA NA NA NA no_subtype FALSE canonical NA NA 104 None 59 4 0 FALSE 0 0 NA B coding 662 1986 227 2212 PB.7475.3 chr13 - 2709 16 novel_not_in_catalog KIAA0226L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 112 None 3 20 3 TRUE 0 0 NA B coding 647 1941 235 2175 PB.954.2 chr1 - 1815 6 full-splice_match CSRP1 ENST00000340006.6 1952 6 136 1 no_subtype FALSE canonical NA NA 54 None 86 8 0 FALSE 0 0 NA C coding 193 579 56 634 PB.7959.52 chr14 - 1474 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 73 None 2 14 2 TRUE 0 0 NA B coding 259 777 7 783 PB.8433.5 chr16 + 3297 2 novel_not_in_catalog CIITA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 188 None 2 13 0 TRUE 0 0 NA C coding 100 300 1158 1457 PB.8433.4 chr16 + 4473 21 novel_not_in_catalog CIITA novel NA NA NA NA no_subtype TRUE canonical NA NA 3491 None 2 7 0 TRUE 0 0 NA C coding 1130 3390 77 3466 PB.841.1 chr1 - 1657 6 novel_not_in_catalog CREG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 86 None 122 7 1 TRUE 0 0 NA B coding 94 282 111 392 PB.8433.6 chr16 + 2325 1 novel_in_catalog CIITA novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 7 8 0 FALSE 0 0 NA C coding 100 300 186 485 PB.8925.1 chr17 - 5757 2 novel_not_in_catalog PIK3R5 novel NA NA NA NA no_subtype FALSE canonical NA NA 5389 None 2 35 1 TRUE 0 0 NA B coding 141 423 2536 2958 PB.8433.3 chr16 + 4535 20 full-splice_match CIITA ENST00000618327.4 4657 20 -3 125 no_subtype FALSE canonical NA NA 3554 None 3 16 2 FALSE 0 0 NA C coding 1107 3321 209 3529 PB.8433.2 chr16 + 5524 22 novel_not_in_catalog CIITA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5448 None 13 11 0 TRUE 0 0 NA C coding 1130 3390 64 3453 PB.5049.1 chr8 - 777 4 full-splice_match ZNF706 ENST00000311212.8 2615 4 -53 1891 no_subtype TRUE canonical NA NA 235 None 13 1 0 FALSE 0 0 NA A coding 76 228 238 465 PB.741.1 chr1 + 2971 12 novel_not_in_catalog LMNA novel NA NA NA NA no_subtype FALSE canonical NA NA 2755 None 2 12 0 TRUE 0 0 NA C coding 341 1023 213 1235 PB.531.1 chr1 + 2475 19 full-splice_match STXBP3 ENST00000370008.3 2478 19 -8 11 no_subtype FALSE canonical NA NA 1742 None 4 4 0 FALSE 0 0 NA A coding 592 1776 59 1834 PB.8242.4 chr15 + 2714 8 novel_not_in_catalog MORF4L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1966 None 2 34 2 TRUE 0 0 NA C coding 173 519 1530 2048 PB.8433.9 chr16 + 2945 1 incomplete-splice_match CIITA ENST00000324288.12 11952 20 8030 978 no_subtype FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA C coding 111 333 222 554 PB.8433.8 chr16 + 2547 4 novel_in_catalog CIITA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1564 None 2 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8242.1 chr15 + 1734 12 full-splice_match MORF4L1 ENST00000426013.6 1880 12 141 5 no_subtype FALSE canonical NA NA 988 None 7 9 0 FALSE 0 0 NA C coding 323 969 102 1070 PB.4821.1 chr8 + 2899 1 genic_intron novelGene_202 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 19 0 FALSE 0 0 NA A coding 123 369 603 971 PB.6387.4 chr11 - 1686 11 novel_in_catalog BSCL2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 295 None 2 4 0 FALSE 0 0 NA C coding 398 1194 401 1594 PB.9430.3 chr17 - 3547 14 novel_not_in_catalog SLC38A10 novel NA NA NA NA no_subtype TRUE canonical NA NA 134 None 2 6 0 TRUE 0 0 NA B coding 994 2982 12 2993 PB.6387.1 chr11 - 1504 11 full-splice_match BSCL2 ENST00000407022.7 1516 11 29 -17 no_subtype FALSE canonical NA NA 113 None 9 2 0 FALSE 0 0 NA C coding 398 1194 219 1412 PB.9430.4 chr17 - 4283 18 novel_not_in_catalog SLC38A10 novel NA NA NA NA no_subtype FALSE canonical NA NA 472 None 67 13 0 TRUE 0 0 NA B coding 1119 3357 374 3730 PB.6387.3 chr11 - 1421 11 full-splice_match BSCL2 ENST00000421906.5 1440 11 53 -34 no_subtype FALSE canonical NA NA 33 None 6 2 0 FALSE 0 0 NA C coding 398 1194 139 1332 PB.1175.2 chr2 - 1112 9 novel_not_in_catalog RNASEH1 novel NA NA NA NA no_subtype FALSE canonical NA NA 182 None 15 0 0 TRUE 0 0 NA A coding 286 858 55 912 PB.6745.1 chr11 - 6004 13 novel_not_in_catalog SNX19 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2213 None 5 19 1 TRUE 0 0 NA A coding 992 2976 540 3515 PB.897.6 chr1 + 1696 1 incomplete-splice_match QSOX1 ENST00000367602.7 9311 12 1617 5999 no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA C coding 182 546 153 698 PB.9297.6 chr17 - 1539 5 novel_in_catalog CD79B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 139 None 3 5 0 FALSE 0 0 NA C coding 201 603 73 675 PB.9297.7 chr17 - 2672 3 novel_in_catalog CD79B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 138 None 2 9 0 FALSE 0 0 NA C coding 123 369 1114 1482 PB.9297.5 chr17 - 2783 2 novel_in_catalog CD79B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 137 None 3 13 0 FALSE 0 0 NA C coding 123 369 1113 1481 PB.9297.2 chr17 - 3621 1 full-splice_match CD79B ENST00000583260.1 433 1 -43 -3145 no_subtype FALSE canonical NA NA NA None 14 11 0 FALSE 0 0 NA C coding 123 369 1954 2322 PB.9297.3 chr17 - 1220 6 full-splice_match CD79B ENST00000392795.7 1254 6 30 4 no_subtype TRUE canonical NA NA 112 None 28 3 0 FALSE 0 0 NA C coding 230 690 46 735 PB.9565.1 chr18 - 1725 10 novel_not_in_catalog MYO5B novel NA NA NA NA no_subtype TRUE canonical NA NA 285 None 9 4 0 TRUE 0 0 NA A coding 418 1254 261 1514 PB.2893.4 chr4 - 1672 9 novel_not_in_catalog CCNI novel NA NA NA NA no_subtype FALSE non_canonical NA NA 521 None 3 10 4 TRUE 0 0 NA B coding 189 567 915 1481 PB.9297.8 chr17 - 1227 6 novel_not_in_catalog CD79B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 139 None 4 8 1 TRUE 0 0 NA C coding 146 438 73 510 PB.4143.1 chr6 + 5562 4 genic_intron novelGene_1160 novel NA NA NA NA no_subtype FALSE canonical NA NA 3254 None 6 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4923.1 chr8 - 2600 8 novel_in_catalog TMEM68 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 147 None 5 14 0 FALSE 0 0 NA A coding 324 972 262 1233 PB.849.1 chr1 - 1721 4 full-splice_match DPT ENST00000367817.3 1786 4 58 7 no_subtype FALSE canonical NA NA 337 None 34 3 0 FALSE 0 0 NA A coding 201 603 33 635 PB.9933.3 chr19 + 854 9 full-splice_match FXYD5 ENST00000541435.6 898 9 64 -20 no_subtype FALSE canonical NA NA 540 None 2 1 0 FALSE 0 0 NA C coding 178 534 54 587 PB.9933.2 chr19 + 1593 8 full-splice_match FXYD5 ENST00000342879.7 1580 8 -14 1 no_subtype FALSE canonical NA NA 1279 None 2 3 0 FALSE 0 0 NA C coding 178 534 793 1326 PB.9933.1 chr19 + 876 9 full-splice_match FXYD5 ENST00000392219.6 872 9 -9 5 no_subtype FALSE canonical NA NA 563 None 8 2 0 FALSE 0 0 NA C coding 178 534 77 610 PB.3634.2 chr5 + 1799 9 novel_not_in_catalog RARS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1667 None 2 14 4 TRUE 0 0 NA B coding 162 486 29 514 PB.9152.4 chr17 + 4432 20 novel_in_catalog NBR1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2646 None 2 26 1 FALSE 0 0 NA C coding 910 2730 88 2817 PB.9152.5 chr17 + 4483 22 novel_not_in_catalog NBR1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2916 None 2 23 2 TRUE 0 0 NA C coding 966 2898 190 3087 PB.4052.4 chr6 + 1422 1 incomplete-splice_match AIM1 ENST00000369066.7 7553 20 6112 20 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7300.1 chr12 + 1677 1 antisense novelGene_CIT_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA A coding 126 378 1110 1487 PB.9152.1 chr17 + 2707 17 novel_in_catalog NBR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2111 None 16 6 0 FALSE 0 0 NA C coding 838 2514 86 2599 PB.9152.2 chr17 + 4379 21 full-splice_match NBR1 ENST00000590996.5 3446 21 13 -946 no_subtype FALSE canonical NA NA 2812 None 56 7 0 FALSE 0 0 NA C coding 966 2898 86 2983 PB.9152.3 chr17 + 4404 20 novel_in_catalog NBR1 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical NA NA 2619 None 3 8 0 FALSE 0 0 NA C coding 901 2703 88 2790 PB.9917.1 chr19 - 1643 1 incomplete-splice_match CEP89 ENST00000305768.9 5678 19 3828 208 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA B coding 145 435 856 1290 PB.10734.2 chr22 + 1653 9 full-splice_match NCF4 ENST00000397147.6 1641 9 -20 8 no_subtype FALSE canonical NA NA 1273 None 2 19 0 FALSE 0 0 NA C coding 348 1044 205 1248 PB.10734.1 chr22 + 1321 10 full-splice_match NCF4 ENST00000248899.10 1396 10 90 -15 no_subtype FALSE canonical NA NA 918 None 45 1 0 FALSE 0 0 NA C coding 339 1017 95 1111 PB.3093.9 chr4 - 1824 1 genic_intron novelGene_1252 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9579.1 chr18 + 4125 30 full-splice_match NEDD4L ENST00000431212.6 3338 30 36 -823 no_subtype FALSE canonical NA NA 2890 None 8 13 0 FALSE 0 0 NA A coding 854 2562 429 2990 PB.9152.9 chr17 + 1605 1 novel_in_catalog NBR1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10734.5 chr22 + 1687 10 novel_not_in_catalog NCF4 novel NA NA NA NA no_subtype TRUE canonical NA NA 1293 None 2 12 2 FALSE 0 0 NA C coding 240 720 549 1268 PB.10734.4 chr22 + 1333 11 novel_not_in_catalog NCF4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 954 None 2 9 2 TRUE 0 0 NA C coding 338 1014 134 1147 PB.2540.1 chr3 + 2914 1 full-splice_match P2RY1 ENST00000305097.5 6747 1 438 3395 no_subtype FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA A coding 373 1119 653 1771 PB.273.1 chr1 - 3498 11 full-splice_match MTF1 ENST00000373036.4 7972 11 28 4446 no_subtype FALSE canonical NA NA 62 None 35 5 0 FALSE 0 0 NA A coding 753 2259 114 2372 PB.7959.22 chr14 - 1523 7 fusion IGHV5-51,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 104 None 3 11 2 TRUE 0 0 NA B coding 251 753 720 1472 PB.4873.1 chr8 + 2497 8 full-splice_match PROSC ENST00000328195.7 2558 8 57 4 no_subtype FALSE canonical NA NA 706 None 6 14 0 FALSE 0 0 NA A coding 269 807 29 835 PB.9984.1 chr19 - 1939 14 full-splice_match PAF1 ENST00000221265.7 2066 14 124 3 no_subtype FALSE canonical NA NA 254 None 7 3 0 FALSE 0 0 NA A coding 531 1593 208 1800 PB.7017.1 chr12 + 5693 4 novel_not_in_catalog RP11-644F5.10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1937 None 2 26 0 TRUE 0 0 NA A coding 143 429 2550 2978 PB.7751.1 chr14 - 3256 14 full-splice_match PPP2R5E ENST00000337537.7 6659 14 22 3381 no_subtype FALSE canonical NA NA 574 None 3 2 0 FALSE 0 0 NA A coding 467 1401 582 1982 PB.2453.1 chr3 + 3565 12 full-splice_match SEC61A1 ENST00000243253.7 3635 12 68 2 no_subtype FALSE canonical NA NA 1360 None 177 8 0 FALSE 0 0 NA A coding 476 1428 117 1544 PB.2564.1 chr3 - 3416 5 full-splice_match B3GALNT1 ENST00000488170.5 1660 5 103 -1859 no_subtype FALSE canonical NA NA 253 None 2 19 1 FALSE 0 0 NA A coding 319 957 598 1554 PB.2483.1 chr3 + 2795 15 novel_in_catalog CEP63 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2272 None 2 8 0 FALSE 0 0 NA A coding 703 2109 320 2428 PB.3909.1 chr6 + 6407 2 genic_intron novelGene_415 novel NA NA NA NA no_subtype FALSE canonical NA NA 905 None 5 35 1 FALSE 0 0 NA A coding 166 498 2000 2497 PB.1115.1 chr1 + 3470 5 full-splice_match SPRTN ENST00000295050.11 3468 5 -5 3 no_subtype FALSE canonical NA NA 1059 None 4 33 0 FALSE 0 0 NA A coding 489 1467 342 1808 PB.7384.1 chr13 + 2017 7 novel_in_catalog ZMYM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1611 None 2 5 0 FALSE 0 0 NA B coding 549 1647 100 1746 PB.7384.3 chr13 + 3503 21 novel_not_in_catalog ZMYM2 novel NA NA NA NA no_subtype TRUE canonical NA NA 2632 None 2 7 1 TRUE 0 0 NA B coding 591 1773 1050 2822 PB.7384.2 chr13 + 3791 22 incomplete-splice_match ZMYM2 ENST00000382871.3 5051 26 1207 53 internal_fragment FALSE canonical NA NA 2919 None 3 2 0 FALSE 0 0 NA B coding 1003 3009 101 3109 PB.1624.2 chr2 + 3598 5 antisense novelGene_RP11-434H14.1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2038 None 19 30 4 FALSE 0 0 NA A coding 88 264 51 314 PB.897.2 chr1 + 2516 13 full-splice_match QSOX1 ENST00000367600.5 2519 13 -1 4 no_subtype FALSE canonical NA NA 1818 None 19 5 0 FALSE 0 0 NA C coding 604 1812 13 1824 PB.11181.1 chrX - 1346 1 full-splice_match LDOC1 ENST00000370526.3 1381 1 21 14 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A coding 146 438 84 521 PB.10463.2 chr20 + 2115 5 novel_in_catalog VAPB novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 650 None 2 9 0 FALSE 0 0 NA C coding 192 576 231 806 PB.3536.1 chr5 + 2841 1 antisense novelGene_HARS_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7007.1 chr12 - 2866 7 novel_not_in_catalog CBX5 novel NA NA NA NA no_subtype TRUE canonical NA NA 115 None 2 8 0 TRUE 0 0 NA C coding 191 573 158 730 PB.398.1 chr1 - 1995 1 full-splice_match JUN ENST00000371222.3 3540 1 284 1261 no_subtype FALSE canonical NA NA NA None 11 7 0 FALSE 0 0 NA A coding 327 981 986 1966 PB.9784.3 chr19 - 1507 6 full-splice_match ACP5 ENST00000412435.6 1527 6 47 -27 no_subtype FALSE canonical NA NA 96 None 3 4 1 FALSE 0 0 NA C coding 325 975 184 1158 PB.10552.1 chr21 - 2624 12 novel_not_in_catalog SETD4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 224 None 2 7 1 TRUE 0 0 NA A coding 440 1320 254 1573 PB.5898.1 chr10 - 2781 2 genic_intron novelGene_808 novel NA NA NA NA no_subtype FALSE canonical NA NA 1460 None 2 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9784.7 chr19 - 1539 8 novel_not_in_catalog ACP5 novel NA NA NA NA no_subtype FALSE canonical NA NA 56 None 4 4 1 TRUE 0 0 NA C coding 325 975 217 1191 PB.9784.5 chr19 - 1507 7 novel_not_in_catalog ACP5 novel NA NA NA NA no_subtype FALSE canonical NA NA 98 None 4 4 1 TRUE 0 0 NA C coding 325 975 186 1160 PB.9784.4 chr19 - 1558 7 full-splice_match ACP5 ENST00000218758.9 1630 7 68 4 no_subtype FALSE canonical NA NA 74 None 2 4 0 FALSE 0 0 NA C coding 325 975 235 1209 PB.960.1 chr1 + 2395 12 novel_not_in_catalog RNPEP novel NA NA NA NA no_subtype FALSE canonical NA NA 1822 None 2 7 0 TRUE 0 0 NA A coding 650 1950 29 1978 PB.3527.1 chr5 + 3694 11 novel_in_catalog ANKHD1-EIF4EBP3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3359 None 2 2 0 FALSE 0 0 NA B coding 1052 3156 205 3360 PB.7816.2 chr14 + 3045 8 novel_in_catalog DLST novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1528 None 4 13 0 FALSE 0 0 NA C coding 270 810 851 1660 PB.10309.1 chr20 - 3140 2 full-splice_match NANP ENST00000304788.3 3964 2 182 642 no_subtype FALSE canonical NA NA 135 None 25 13 0 FALSE 0 0 NA A coding 248 744 46 789 PB.5164.1 chr8 + 2905 2 full-splice_match EXOSC4 ENST00000527954.1 1065 2 -782 -1058 no_subtype FALSE canonical NA NA 1509 None 5 17 0 FALSE 0 0 NA C coding 241 723 1144 1866 PB.6478.6 chr11 + 2062 8 novel_in_catalog TBC1D10C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1382 None 4 1 0 FALSE 0 0 NA C coding 220 660 1068 1727 PB.890.2 chr1 - 2900 5 antisense novelGene_FAM20B_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 163 None 2 25 1 FALSE 0 0 NA B coding 102 306 1436 1741 PB.2996.1 chr4 - 3920 1 antisense novelGene_HADH_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1899.6 chr2 + 1960 10 novel_in_catalog MFF novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1123 None 2 2 0 FALSE 0 0 NA C coding 316 948 305 1252 PB.1899.4 chr2 + 1565 6 full-splice_match MFF ENST00000409565.5 1548 6 9 -26 no_subtype FALSE canonical NA NA 725 None 2 4 0 FALSE 0 0 NA C coding 218 654 201 854 PB.6425.1 chr11 - 1269 1 full-splice_match ZNHIT2 ENST00000310597.5 1306 1 35 2 no_subtype FALSE canonical NA NA NA None 2 1 0 FALSE 0 0 NA A coding 403 1209 21 1229 PB.1899.2 chr2 + 1933 9 full-splice_match MFF ENST00000304593.13 2004 9 67 4 no_subtype FALSE canonical NA NA 1088 None 2 6 0 FALSE 0 0 NA C coding 291 873 345 1217 PB.1899.3 chr2 + 1824 8 novel_not_in_catalog MFF novel NA NA NA NA no_subtype FALSE non_canonical NA NA 987 None 2 15 2 TRUE 0 0 NA C coding 147 441 313 753 PB.3002.4 chr4 + 1726 7 novel_in_catalog CCDC109B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1528 None 2 9 0 FALSE 0 0 NA C coding 192 576 256 831 PB.11213.5 chrX + 2983 10 novel_not_in_catalog IKBKG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2257 None 5 11 2 TRUE 0 0 NA C coding 261 783 176 958 PB.3635.1 chr5 - 3759 8 novel_not_in_catalog PANK3 novel NA NA NA NA no_subtype FALSE canonical NA NA 91 None 3 19 1 TRUE 0 0 NA C coding 370 1110 64 1173 PB.3074.1 chr4 + 2672 2 novel_not_in_catalog TMEM184C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2011 None 4 33 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.10782.4 chr22 + 3016 22 novel_not_in_catalog SGSM3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2590 None 5 13 0 TRUE 0 0 NA B coding 663 1989 188 2176 PB.5284.19 chr9 - 8176 57 full-splice_match TLN1 ENST00000314888.9 8823 57 250 397 no_subtype FALSE canonical NA NA 71 None 31 5 0 FALSE 0 0 NA C coding 2541 7623 105 7727 PB.10782.6 chr22 + 2980 23 novel_not_in_catalog SGSM3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2554 None 3 32 1 TRUE 0 0 NA B coding 663 1989 170 2158 PB.10782.7 chr22 + 2805 23 novel_not_in_catalog SGSM3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2347 None 4 14 1 TRUE 0 0 NA B coding 730 2190 168 2357 PB.10782.1 chr22 + 2712 22 novel_not_in_catalog SGSM3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2286 None 72 9 0 TRUE 0 0 NA B coding 749 2247 115 2361 PB.10782.2 chr22 + 2918 21 novel_not_in_catalog SGSM3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2492 None 2 12 3 FALSE 0 0 NA B coding 791 2373 195 2567 PB.10782.3 chr22 + 3137 22 novel_not_in_catalog SGSM3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2702 None 2 20 1 TRUE 0 0 NA B coding 663 1989 195 2183 PB.1845.27 chr2 - 6411 30 novel_in_catalog FN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 414 None 2 17 0 FALSE 0 0 NA C coding 1567 4701 267 4967 PB.1597.1 chr2 + 2167 1 genic_intron novelGene_1157 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10782.8 chr22 + 2598 22 novel_not_in_catalog SGSM3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2174 None 2 14 0 TRUE 0 0 NA B coding 701 2103 147 2249 PB.10782.9 chr22 + 2723 22 novel_not_in_catalog SGSM3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2296 None 3 17 1 TRUE 0 0 NA B coding 666 1998 115 2112 PB.5284.17 chr9 - 5739 38 novel_not_in_catalog TLN1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 32 None 2 9 1 TRUE 0 0 NA C coding 545 1635 3652 5286 PB.1857.4 chr2 - 2349 12 full-splice_match TMBIM1 ENST00000258412.7 2371 12 11 11 no_subtype FALSE canonical NA NA 101 None 4 5 0 FALSE 0 0 NA C coding 311 933 142 1074 PB.5928.2 chr10 - 2982 21 full-splice_match NOC3L ENST00000371361.3 3455 21 15 458 no_subtype FALSE canonical NA NA 95 None 31 5 0 FALSE 0 0 NA A coding 800 2400 87 2486 PB.4643.1 chr7 + 3425 24 full-splice_match SND1 ENST00000354725.7 3476 24 36 15 no_subtype FALSE canonical NA NA 2825 None 234 3 0 FALSE 0 0 NA C coding 910 2730 159 2888 PB.4696.2 chr7 - 3745 4 full-splice_match MTPN ENST00000393085.3 3738 4 -13 6 no_subtype FALSE canonical NA NA 301 None 45 15 0 FALSE 0 0 NA C coding 118 354 230 583 PB.1558.3 chr2 + 3396 2 genic_intron novelGene_1011 novel NA NA NA NA no_subtype FALSE canonical NA NA 32 None 3 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.905.2 chr1 + 2245 12 novel_not_in_catalog NPL novel NA NA NA NA no_subtype FALSE canonical NA NA 841 None 16 3 0 FALSE 0 0 NA B coding 320 960 64 1023 PB.1885.1 chr2 + 3048 16 full-splice_match ACSL3 ENST00000392066.7 3147 16 94 5 no_subtype FALSE canonical NA NA 2327 None 25 4 0 FALSE 0 0 NA C coding 709 2127 356 2482 PB.8939.3 chr17 - 1821 5 full-splice_match PMP22 ENST00000312280.7 1810 5 -15 4 no_subtype FALSE canonical NA NA 169 None 2 3 0 FALSE 0 0 NA C coding 160 480 204 683 PB.1885.3 chr2 + 2987 15 novel_in_catalog ACSL3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2268 None 3 5 1 FALSE 0 0 NA C coding 709 2127 297 2423 PB.8939.1 chr17 - 1798 5 full-splice_match PMP22 ENST00000395938.6 1817 5 15 4 no_subtype FALSE canonical NA NA 146 None 10 11 1 FALSE 0 0 NA C coding 160 480 181 660 PB.722.1 chr1 - 2808 5 novel_not_in_catalog CLK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1231 None 2 34 1 TRUE 0 0 NA B coding 104 312 1362 1673 PB.336.2 chr1 + 2727 2 novel_in_catalog UROD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 67 None 2 13 0 FALSE 0 0 NA C coding 112 336 1913 2248 PB.722.3 chr1 - 1581 10 novel_in_catalog GBA novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 161 None 2 4 1 FALSE 0 0 NA C coding 441 1323 195 1517 PB.722.2 chr1 - 1838 11 full-splice_match GBA ENST00000368373.7 2276 11 -48 486 no_subtype FALSE canonical NA NA 197 None 11 3 1 FALSE 0 0 NA C coding 516 1548 231 1778 PB.722.5 chr1 - 3167 11 novel_in_catalog CLK2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 286 None 6 13 0 FALSE 0 0 NA B coding 271 813 2011 2823 PB.6783.3 chr12 + 4139 31 incomplete-splice_match NCAPD2 ENST00000315579.9 5548 32 729 680 3prime_fragment FALSE canonical NA NA 4034 None 2 1 0 FALSE 0 0 NA C coding 1356 4068 71 4138 PB.4458.1 chr7 + 2053 2 incomplete-splice_match EIF4H ENST00000353999.6 2503 6 444 6 internal_fragment FALSE canonical NA NA 131 None 2 13 0 FALSE 0 0 NA A coding 110 330 1558 1887 PB.6783.2 chr12 + 4256 32 full-splice_match NCAPD2 ENST00000315579.9 5548 32 751 541 no_subtype FALSE canonical NA NA 4168 None 6 2 0 FALSE 0 0 NA C coding 1401 4203 49 4251 PB.9027.2 chr17 - 2293 12 full-splice_match BLMH ENST00000261714.10 2365 12 55 17 no_subtype FALSE canonical NA NA 133 None 2 7 0 FALSE 0 0 NA A coding 455 1365 121 1485 PB.6082.3 chr10 + 1718 7 full-splice_match BCCIP ENST00000278100.10 1236 7 -3 -479 no_subtype FALSE canonical NA NA 789 None 4 5 0 FALSE 0 0 NA C coding 314 942 16 957 PB.7828.1 chr14 - 1220 5 full-splice_match C14orf1 ENST00000256319.6 2633 5 310 1103 no_subtype FALSE canonical NA NA 105 None 2 5 0 FALSE 0 0 NA A coding 140 420 137 556 PB.7542.1 chr13 + 3005 9 full-splice_match GPR180 ENST00000376958.4 8822 9 15 5802 no_subtype FALSE canonical NA NA 1174 None 4 8 0 FALSE 0 0 NA A coding 440 1320 11 1330 PB.9464.1 chr18 - 1702 16 full-splice_match ENOSF1 ENST00000251101.11 1867 16 15 150 no_subtype FALSE canonical NA NA 158 None 9 3 0 FALSE 0 0 NA A coding 443 1329 75 1403 PB.7868.1 chr14 + 2806 1 genic CPSF2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4678.1 chr7 - 5930 2 novel_not_in_catalog CHCHD3 novel NA NA NA NA no_subtype TRUE canonical NA NA 388 None 2 18 1 TRUE 0 0 NA A coding 106 318 4887 5204 PB.6082.5 chr10 - 2958 13 novel_not_in_catalog DHX32 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 236 None 2 10 1 TRUE 0 0 NA B coding 743 2229 384 2612 PB.6082.4 chr10 - 2949 13 novel_not_in_catalog DHX32 novel NA NA NA NA no_subtype FALSE canonical NA NA 236 None 2 5 0 TRUE 0 0 NA B coding 743 2229 375 2603 PB.2127.1 chr3 + 5182 7 full-splice_match SNRK ENST00000296088.11 5183 7 -2 3 no_subtype FALSE canonical NA NA 1385 None 3 9 0 FALSE 0 0 NA C coding 765 2295 307 2601 PB.10901.1 chrX + 3233 2 novel_not_in_catalog ZFX novel NA NA NA NA no_subtype FALSE canonical NA NA 418 None 4 18 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.9847.1 chr19 + 1465 4 full-splice_match FAM32A ENST00000263384.11 1455 4 -17 7 no_subtype FALSE canonical NA NA 312 None 84 8 0 FALSE 0 0 NA A coding 112 336 43 378 PB.2127.2 chr3 + 5185 9 novel_not_in_catalog SNRK novel NA NA NA NA no_subtype FALSE canonical NA NA 1380 None 2 13 0 TRUE 0 0 NA C coding 765 2295 302 2596 PB.2127.5 chr3 - 5378 2 genic RP11-188P20.3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5201 None 4 24 1 FALSE 0 0 NA A coding 147 441 2902 3342 PB.2127.7 chr3 + 2721 1 incomplete-splice_match SNRK ENST00000429705.6 5128 6 2398 10 no_subtype FALSE canonical NA NA NA None 3 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6301.3 chr11 + 3391 32 novel_not_in_catalog DGKZ novel NA NA NA NA no_subtype TRUE canonical NA NA 2677 None 10 9 0 TRUE 0 0 NA B coding 895 2685 107 2791 PB.9232.2 chr17 + 2619 5 genic ACSF2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2532 None 2 14 1 TRUE 0 0 NA B coding 10 30 379 408 PB.5174.1 chr8 + 2134 7 novel_not_in_catalog SLC52A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1666 None 3 10 3 TRUE 0 0 NA A coding 445 1335 542 1876 PB.8510.1 chr16 + 2978 13 incomplete-splice_match TNRC6A ENST00000450465.6 3700 18 700 22 internal_fragment FALSE canonical NA NA 1645 None 2 7 0 FALSE 0 0 NA B coding 643 1929 90 2018 PB.8510.3 chr16 + 2795 3 novel_in_catalog TNRC6A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 882 None 2 14 0 FALSE 0 0 NA B coding 112 336 1629 1964 PB.11097.1 chrX - 1006 1 full-splice_match PHBP10 ENST00000416467.2 784 1 -60 -162 no_subtype FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA A coding 156 468 60 527 PB.4175.2 chr6 + 3175 11 novel_not_in_catalog LTV1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2792 None 3 16 0 FALSE 0 0 NA C coding 265 795 112 906 PB.6739.4 chr11 + 2717 18 full-splice_match APLP2 ENST00000263574.9 3727 18 -7 1017 no_subtype FALSE canonical NA NA 2269 None 46 4 0 FALSE 0 0 NA C coding 763 2289 80 2368 PB.3583.2 chr5 + 1484 2 full-splice_match SMIM3 ENST00000526627.1 2332 2 847 1 no_subtype FALSE canonical NA NA 180 None 39 8 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.4175.1 chr6 + 1793 11 full-splice_match LTV1 ENST00000367576.5 1847 11 21 33 no_subtype FALSE canonical NA NA 1430 None 33 2 0 FALSE 0 0 NA C coding 475 1425 114 1538 PB.905.8 chr1 + 1496 1 genic_intron novelGene_1341 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 15 0 FALSE 0 0 NA A coding 72 216 140 355 PB.10288.1 chr20 + 1348 6 full-splice_match DTD1 ENST00000377452.3 1387 6 29 10 no_subtype FALSE canonical NA NA 800 None 2 3 0 FALSE 0 0 NA A coding 209 627 152 778 PB.6049.1 chr10 - 1375 14 full-splice_match SFXN4 ENST00000355697.6 1363 14 -52 40 no_subtype FALSE canonical NA NA 183 None 7 3 0 FALSE 0 0 NA C coding 337 1011 73 1083 PB.6049.2 chr10 - 3147 9 novel_in_catalog SFXN4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 491 None 2 17 0 FALSE 0 0 NA C coding 213 639 2195 2833 PB.4094.1 chr6 - 1980 14 full-splice_match HDAC2 ENST00000519065.5 9874 14 144 7750 no_subtype FALSE canonical NA NA 285 None 23 5 0 FALSE 0 0 NA A coding 488 1464 234 1697 PB.2568.3 chr3 - 2825 17 novel_not_in_catalog GOLIM4 novel NA NA NA NA no_subtype FALSE canonical NA NA 806 None 4 2 0 TRUE 0 0 NA B coding 639 1917 710 2626 PB.2568.1 chr3 - 3743 18 novel_not_in_catalog GOLIM4 novel NA NA NA NA no_subtype FALSE canonical NA NA 565 None 8 9 0 TRUE 0 0 NA B coding 697 2091 379 2469 PB.2568.4 chr3 - 3276 6 novel_in_catalog GOLIM4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 754 None 2 18 0 FALSE 0 0 NA B coding 187 561 658 1218 PB.3679.1 chr5 + 1404 5 full-splice_match TMED9 ENST00000332598.6 1473 5 41 28 no_subtype FALSE canonical NA NA 574 None 93 7 0 FALSE 0 0 NA A coding 235 705 17 721 PB.8611.2 chr16 + 3156 11 novel_not_in_catalog RBL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1643 None 3 14 2 FALSE 0 0 NA B coding 341 1023 253 1275 PB.8611.1 chr16 + 2879 19 incomplete-splice_match RBL2 ENST00000262133.10 4906 22 53 1974 3prime_fragment FALSE canonical NA NA 2859 None 23 0 0 FALSE 0 0 NA B coding 931 2793 85 2877 PB.2989.2 chr4 - 3139 8 novel_not_in_catalog PPA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 200 None 2 17 0 FALSE 0 0 NA C coding 221 663 44 706 PB.4670.1 chr7 - 1471 1 genic_intron novelGene_1129 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2869.1 chr4 + 1353 1 genic_intron novelGene_674 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A coding 193 579 774 1352 PB.8506.5 chr16 + 1616 1 genic_intron novelGene_227 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10793.1 chr22 - 1613 2 full-splice_match TOB2 ENST00000327492.3 4561 2 176 2772 no_subtype FALSE canonical NA NA 469 None 76 4 0 FALSE 0 0 NA A coding 344 1032 532 1563 PB.1708.1 chr2 - 3187 17 full-splice_match GPR155 ENST00000295500.8 3930 17 -26 769 no_subtype FALSE canonical NA NA 191 None 5 2 0 FALSE 0 0 NA A coding 870 2610 372 2981 PB.8506.3 chr16 + 2959 15 incomplete-splice_match PRKCB ENST00000303531.11 7969 17 380 4630 internal_fragment FALSE canonical NA NA 1635 None 2 5 0 FALSE 0 0 NA B coding 544 1632 160 1791 PB.8506.9 chr16 + 2643 1 novel_in_catalog PRKCB novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9043.1 chr17 - 2086 20 novel_not_in_catalog UTP6 novel NA NA NA NA no_subtype FALSE canonical NA NA 195 None 3 3 0 TRUE 0 0 NA A coding 597 1791 104 1894 PB.6083.2 chr10 - 2860 12 novel_in_catalog DHX32 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 215 None 13 5 0 FALSE 0 0 NA B coding 743 2229 463 2691 PB.9100.1 chr17 - 2712 1 genic_intron novelGene_396 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4483.1 chr7 + 2546 15 novel_in_catalog CD36 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1648 None 5 8 0 FALSE 0 0 NA B coding 472 1416 230 1645 PB.4483.2 chr7 + 2601 16 novel_not_in_catalog CD36 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1705 None 3 10 2 TRUE 0 0 NA B coding 472 1416 287 1702 PB.4483.3 chr7 + 2607 15 novel_in_catalog CD36 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1704 None 36 9 0 FALSE 0 0 NA B coding 472 1416 286 1701 PB.5035.1 chr8 + 3578 23 novel_not_in_catalog MATN2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3024 None 3 8 2 TRUE 0 0 NA B coding 939 2817 261 3077 PB.5035.2 chr8 + 3502 22 novel_not_in_catalog MATN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2950 None 15 4 1 TRUE 0 0 NA B coding 937 2811 193 3003 PB.5035.3 chr8 + 3567 22 novel_not_in_catalog MATN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3021 None 5 5 0 TRUE 0 0 NA B coding 956 2868 207 3074 PB.9452.3 chr17 - 3679 9 full-splice_match CSNK1D ENST00000314028.10 3712 9 31 2 no_subtype FALSE canonical NA NA 395 None 7 16 0 FALSE 0 0 NA C coding 415 1245 320 1564 PB.11213.2 chrX + 1964 10 full-splice_match IKBKG ENST00000594239.5 2299 10 331 4 no_subtype FALSE canonical NA NA 1240 None 16 1 0 FALSE 0 0 NA C coding 407 1221 160 1380 PB.8742.1 chr16 - 2841 1 novel_in_catalog FA2H novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 18 0 FALSE 0 0 NA C coding 250 750 56 805 PB.5480.4 chr9 + 2537 17 novel_in_catalog GSN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2131 None 38 6 0 FALSE 0 0 NA C coding 731 2193 106 2298 PB.4646.1 chr7 + 3993 20 novel_not_in_catalog FLNC novel NA NA NA NA no_subtype FALSE canonical NA NA 3058 None 2 8 1 FALSE 0 0 NA A coding 903 2709 396 3104 PB.9552.1 chr18 + 2778 10 novel_not_in_catalog SLC14A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1214 None 3 9 1 TRUE 0 0 NA B coding 389 1167 219 1385 PB.5480.5 chr9 + 4025 2 genic AL513122.1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1760 None 4 14 1 TRUE 0 0 NA A coding 143 429 2753 3181 PB.7132.1 chr12 - 895 6 full-splice_match CSRP2 ENST00000311083.9 943 6 44 4 no_subtype TRUE canonical NA NA 79 None 2 0 0 FALSE 0 0 NA A coding 193 579 81 659 PB.2463.1 chr3 - 2892 7 novel_not_in_catalog CNBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 117 None 52 22 2 TRUE 0 0 NA B coding 107 321 325 645 PB.7908.1 chr14 + 2724 1 genic_intron novelGene_903 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 11 0 FALSE 0 0 NA A coding 104 312 1484 1795 PB.712.7 chr1 - 2902 14 novel_not_in_catalog SHC1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 126 None 4 20 2 TRUE 0 0 NA B coding 424 1272 127 1398 PB.756.1 chr5 - 1648 3 genic KRT8P33 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1480 None 3 11 2 FALSE 0 0 NA A coding 186 558 633 1190 PB.5480.7 chr9 + 2620 17 full-splice_match GSN ENST00000373818.8 2657 17 36 1 no_subtype FALSE canonical NA NA 2212 None 40 3 0 FALSE 0 0 NA C coding 782 2346 34 2379 PB.1052.1 chr1 + 1771 7 full-splice_match TGFB2 ENST00000366930.8 4969 7 285 2913 no_subtype FALSE canonical NA NA 1268 None 3 8 0 FALSE 0 0 NA A coding 414 1242 183 1424 PB.4310.1 chr7 - 3176 3 novel_not_in_catalog AGR3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1417 None 2 9 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.2660.1 chr3 - 1868 2 genic_intron novelGene_1354 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1125 None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2668.1 chr3 + 2610 1 genic_intron novelGene_1356 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11213.3 chrX + 3419 10 novel_not_in_catalog IKBKG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2695 None 2 16 0 FALSE 0 0 NA C coding 162 486 2350 2835 PB.5480.1 chr9 + 2597 18 novel_in_catalog GSN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2190 None 151 3 0 FALSE 0 0 NA C coding 731 2193 165 2357 PB.7959.115 chr14 - 1522 8 fusion IGHV3-62,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 125 None 3 14 4 TRUE 0 0 NA B coding 254 762 716 1477 PB.7959.117 chr14 - 1464 7 fusion IGHV5-51,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 103 None 2 12 3 TRUE 0 0 NA B coding 454 1362 58 1419 PB.7959.116 chr14 - 1469 10 fusion IGHV1-18,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 74 None 2 8 4 TRUE 0 0 NA A coding 254 762 663 1424 PB.7959.111 chr14 - 1448 6 fusion IGHA1,IGHV3-23 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 121 None 2 7 3 TRUE 0 0 NA B coding 163 489 380 868 PB.6572.2 chr11 - 2467 1 full-splice_match CREBZF ENST00000527447.1 4037 1 -614 2184 no_subtype FALSE canonical NA NA NA None 3 12 0 FALSE 0 0 NA C coding 354 1062 842 1903 PB.6572.1 chr11 - 3582 3 full-splice_match CREBZF ENST00000528561.5 1099 3 -1025 -1458 no_subtype FALSE canonical NA NA 1606 None 2 22 0 FALSE 0 0 NA C coding 354 1062 255 1316 PB.7959.112 chr14 - 1505 7 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 85 None 2 14 3 TRUE 0 0 NA B coding 254 762 699 1460 PB.7959.119 chr14 - 1514 8 fusion IGHV3-62,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 124 None 2 11 2 TRUE 0 0 NA B coding 136 408 79 486 PB.482.1 chr1 + 1487 5 novel_in_catalog RPAP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 348 None 4 7 0 FALSE 0 0 NA C coding 158 474 16 489 PB.482.2 chr1 + 3213 13 full-splice_match RPAP2 ENST00000610020.1 16993 13 99 13681 no_subtype FALSE canonical NA NA 1848 None 4 11 0 FALSE 0 0 NA C coding 612 1836 11 1846 PB.5017.1 chr8 - 2969 1 antisense novelGene_ESRP1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4240.1 chr6 - 1701 9 full-splice_match AGPAT4 ENST00000320285.8 7865 9 81 6083 no_subtype FALSE canonical NA NA 43 None 2 6 0 FALSE 0 0 NA A coding 378 1134 133 1266 PB.11191.1 chrX - 3210 9 novel_not_in_catalog GABRE novel NA NA NA NA no_subtype FALSE canonical NA NA 108 None 2 2 0 FALSE 0 0 NA B coding 299 897 736 1632 PB.7887.1 chr14 - 2020 1 genic_intron novelGene_860 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A coding 134 402 627 1028 PB.10120.2 chr19 - 1739 7 novel_in_catalog IL4I1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 74 None 2 3 1 FALSE 0 0 NA C coding 544 1632 97 1728 PB.10120.1 chr19 - 1808 8 full-splice_match IL4I1 ENST00000391826.6 1863 8 46 9 no_subtype FALSE canonical NA NA 75 None 14 0 0 FALSE 0 0 NA C coding 567 1701 98 1798 PB.6604.9 chr11 - 2896 11 novel_not_in_catalog CCDC82 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 288 None 2 14 1 TRUE 0 0 NA B coding 521 1563 464 2026 PB.8456.1 chr16 - 3725 18 full-splice_match RRN3 ENST00000198767.10 3762 18 33 4 no_subtype FALSE canonical NA NA 140 None 18 19 0 FALSE 0 0 NA C coding 651 1953 52 2004 PB.6857.1 chr12 - 1298 8 full-splice_match LDHB ENST00000350669.5 1303 8 1 4 no_subtype FALSE canonical NA NA 91 None 52 1 0 FALSE 0 0 NA A coding 334 1002 98 1099 PB.2636.1 chr3 - 2578 7 full-splice_match EHHADH ENST00000231887.7 3850 7 11 1261 no_subtype FALSE canonical NA NA 139 None 24 4 0 FALSE 0 0 NA A coding 723 2169 66 2234 PB.564.1 chr1 + 1446 11 full-splice_match CHI3L2 ENST00000369748.8 1468 11 19 3 no_subtype FALSE canonical NA NA 1227 None 16 1 0 FALSE 0 0 NA A coding 390 1170 53 1222 PB.6604.2 chr11 - 2613 10 novel_not_in_catalog CCDC82 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 78 None 19 12 0 TRUE 0 0 NA B coding 521 1563 177 1739 PB.6604.1 chr11 - 2770 11 novel_not_in_catalog CCDC82 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 78 None 30 12 0 TRUE 0 0 NA B coding 521 1563 336 1898 PB.6604.7 chr11 - 2644 11 novel_not_in_catalog CCDC82 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 36 None 2 13 1 TRUE 0 0 NA B coding 521 1563 210 1772 PB.6604.6 chr11 - 7419 10 novel_not_in_catalog CCDC82 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 93 None 2 51 1 TRUE 0 0 NA B coding 521 1563 4984 6546 PB.6604.5 chr11 - 3007 9 novel_not_in_catalog CCDC82 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 557 None 2 19 1 TRUE 0 0 NA B coding 521 1563 572 2134 PB.813.2 chr1 + 2661 12 novel_not_in_catalog ATF6 novel NA NA NA NA no_subtype FALSE canonical NA NA 2278 None 2 5 1 TRUE 0 0 NA B coding 459 1377 151 1527 PB.3628.1 chr5 - 1597 2 full-splice_match ZBED8 ENST00000408953.3 2851 2 26 1228 no_subtype FALSE canonical NA NA 433 None 8 1 0 FALSE 0 0 NA A coding 371 1113 483 1595 PB.1477.2 chr2 + 4473 25 novel_not_in_catalog PROM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2774 None 10 16 3 TRUE 0 0 NA B coding 834 2502 91 2592 PB.7019.1 chr12 + 1358 1 antisense novelGene_RP11-762I7.5_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.120 chr14 - 1455 8 fusion IGHA1,IGHV1-69 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 94 None 2 13 5 TRUE 0 0 NA B coding 454 1362 49 1410 PB.41.4 chr1 - 4103 13 novel_not_in_catalog RERE novel NA NA NA NA no_subtype FALSE canonical NA NA 49 None 6 3 0 FALSE 0 0 NA B coding 1012 3036 509 3544 PB.10236.1 chr20 + 2740 24 full-splice_match VPS16 ENST00000380445.7 2750 24 7 3 no_subtype TRUE canonical NA NA 2440 None 70 0 0 FALSE 0 0 NA C coding 839 2517 66 2582 PB.10236.2 chr20 + 2817 23 novel_in_catalog VPS16 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2517 None 4 3 0 FALSE 0 0 NA C coding 583 1749 66 1814 PB.10236.3 chr20 + 3125 23 novel_in_catalog VPS16 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2533 None 3 1 0 FALSE 0 0 NA C coding 547 1641 64 1704 PB.10236.4 chr20 + 3218 20 novel_in_catalog VPS16 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2918 None 3 6 0 FALSE 0 0 NA C coding 513 1539 52 1590 PB.9256.2 chr17 - 2005 6 full-splice_match VEZF1 ENST00000581208.1 2321 6 -96 412 no_subtype FALSE canonical NA NA 170 None 24 2 0 FALSE 0 0 NA C coding 521 1563 138 1700 PB.9524.1 chr18 - 3836 1 full-splice_match SLC25A52 ENST00000269205.5 1319 1 3 -2520 no_subtype FALSE canonical NA NA NA None 3 21 0 FALSE 0 0 NA A coding 307 921 187 1107 PB.2626.1 chr3 + 2672 20 novel_in_catalog ABCF3 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 2212 None 4 16 1 FALSE 0 0 NA C coding 488 1464 905 2368 PB.813.1 chr1 + 3246 17 novel_not_in_catalog ATF6 novel NA NA NA NA no_subtype FALSE canonical NA NA 2771 None 30 5 1 TRUE 0 0 NA B coding 670 2010 11 2020 PB.7206.11 chr12 + 5661 3 genic CHST11 novel NA NA NA NA no_subtype FALSE canonical NA NA 296 None 2 40 1 TRUE 0 0 NA C coding 170 510 1324 1833 PB.10395.1 chr20 + 2926 1 novel_in_catalog HNF4A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 17 0 FALSE 0 0 NA B coding 132 396 105 500 PB.10395.2 chr20 + 4469 11 novel_not_in_catalog HNF4A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1744 None 11 13 0 TRUE 0 0 NA B coding 452 1356 105 1460 PB.10395.3 chr20 + 4435 11 novel_not_in_catalog HNF4A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1710 None 5 17 1 TRUE 0 0 NA B coding 442 1326 101 1426 PB.10395.5 chr20 + 2051 1 genic_intron novelGene_438 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1406.1 chr2 - 3370 6 full-splice_match TEX261 ENST00000272438.8 3441 6 61 10 no_subtype FALSE canonical NA NA 197 None 37 9 0 FALSE 0 0 NA C coding 196 588 128 715 PB.6873.3 chr12 + 3027 3 full-splice_match SSPN ENST00000422622.3 4348 3 12 1309 no_subtype FALSE canonical NA NA 267 None 2 19 0 FALSE 0 0 NA C coding 140 420 211 630 PB.5858.1 chr10 + 3672 6 full-splice_match SAMD8 ENST00000372690.7 1654 6 177 -2195 no_subtype FALSE canonical NA NA 1033 None 12 22 1 FALSE 0 0 NA C coding 415 1245 91 1335 PB.5392.1 chr9 + 2890 23 full-splice_match NCBP1 ENST00000375147.7 5178 23 168 2120 no_subtype TRUE canonical NA NA 2347 None 28 6 0 FALSE 0 0 NA A coding 790 2370 89 2458 PB.7704.1 chr14 + 2463 2 full-splice_match PTGER2 ENST00000245457.5 2383 2 -85 5 no_subtype FALSE canonical NA NA 1082 None 4 6 0 FALSE 0 0 NA A coding 358 1074 240 1313 PB.10897.6 chrX + 1427 4 novel_not_in_catalog SAT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1401 None 6 8 0 TRUE 0 0 NA C coding 206 618 431 1048 PB.10897.1 chrX + 803 6 full-splice_match SAT1 ENST00000379270.4 1065 6 3 259 no_subtype FALSE canonical NA NA 521 None 51 1 0 FALSE 0 0 NA C coding 171 513 177 689 PB.1393.1 chr2 + 3867 1 novel_in_catalog ARHGAP25 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10897.3 chrX + 2488 5 novel_in_catalog SAT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1967 None 3 8 0 FALSE 0 0 NA C coding 206 618 1518 2135 PB.10897.2 chrX + 1638 1 novel_in_catalog SAT1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 19 7 0 FALSE 0 0 NA C coding 156 468 453 920 PB.2295.2 chr3 + 2855 3 novel_not_in_catalog ARL6IP5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2159 None 2 9 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.1270.1 chr2 - 3161 2 genic_intron novelGene_354 novel NA NA NA NA no_subtype FALSE canonical NA NA 3082 None 2 18 0 FALSE 0 0 NA A coding 162 486 189 674 PB.5970.1 chr10 + 3356 3 genic HIF1AN novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1952 None 2 19 1 TRUE 0 0 NA C coding 126 378 2977 3354 PB.2093.1 chr3 - 3865 1 full-splice_match EPM2AIP1 ENST00000322716.7 8126 1 0 4261 no_subtype FALSE canonical NA NA NA None 8 14 0 FALSE 0 0 NA A coding 607 1821 92 1912 PB.3142.1 chr4 + 3243 2 genic_intron novelGene_1343 novel NA NA NA NA no_subtype FALSE canonical NA NA 2636 None 12 22 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4584.1 chr7 - 6435 3 genic_intron novelGene_952 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 637 None 3 57 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4243.1 chr6 - 2726 1 genic_intron novelGene_1284 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 20 0 FALSE 0 0 NA A coding 78 234 170 403 PB.10148.1 chr19 - 2540 5 full-splice_match ZNF432 ENST00000221315.9 2577 5 21 16 no_subtype FALSE canonical NA NA 105 None 2 3 0 FALSE 0 0 NA A coding 652 1956 298 2253 PB.10633.1 chr22 - 1402 9 novel_not_in_catalog GNB1L novel NA NA NA NA no_subtype FALSE canonical NA NA 30 None 4 1 0 TRUE 0 0 NA B coding 327 981 148 1128 PB.4418.10 chr7 + 2017 1 genic_intron novelGene_494 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A coding 112 336 1590 1925 PB.6151.1 chr11 + 2763 1 genic_intron novelGene_29 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3832.1 chr6 + 3809 28 full-splice_match SKIV2L ENST00000375394.6 3894 28 75 10 no_subtype FALSE canonical NA NA 3578 None 36 0 0 FALSE 0 0 NA C coding 1246 3738 39 3776 PB.3832.2 chr6 + 3651 26 novel_in_catalog SKIV2L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3417 None 2 1 0 FALSE 0 0 NA C coding 1088 3264 352 3615 PB.992.1 chr1 - 1508 1 incomplete-splice_match RBBP5 ENST00000367164.1 4290 14 2668 115 no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9790.1 chr19 - 2907 6 antisense novelGene_ZNF791_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 279 None 13 13 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.9790.2 chr19 + 3070 7 novel_not_in_catalog ZNF791 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2914 None 2 13 0 TRUE 0 0 NA A coding 576 1728 145 1872 PB.2220.2 chr3 + 3701 11 novel_not_in_catalog MAPKAPK3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2306 None 2 10 0 FALSE 0 0 NA B coding 262 786 1671 2456 PB.2551.10 chr3 - 3530 6 novel_in_catalog CCNL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 349 None 2 17 1 FALSE 0 0 NA C coding 213 639 47 685 PB.3562.3 chr5 + 2626 16 incomplete-splice_match RBM27 ENST00000265271.6 6451 21 5 3820 3prime_fragment FALSE canonical NA NA 2612 None 3 1 0 FALSE 0 0 NA B coding 821 2463 162 2624 PB.4811.3 chr8 - 1587 2 novel_not_in_catalog ASAH1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1498 None 2 9 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.4811.2 chr8 - 1468 15 novel_not_in_catalog ASAH1 novel NA NA NA NA no_subtype FALSE canonical NA NA 123 None 7 3 0 TRUE 0 0 NA B coding 395 1185 46 1230 PB.5931.1 chr10 + 2014 10 novel_not_in_catalog CYP2C18 novel NA NA NA NA no_subtype FALSE canonical NA NA 1510 None 2 4 0 TRUE 0 0 NA A coding 490 1470 220 1689 PB.10575.1 chr21 - 3902 8 full-splice_match RIPK4 ENST00000332512.7 3889 8 8 -21 no_subtype FALSE canonical NA NA 239 None 21 12 0 FALSE 0 0 NA A coding 784 2352 58 2409 PB.7959.123 chr14 - 1467 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 4 15 3 TRUE 0 0 NA B coding 471 1413 11 1423 PB.9031.1 chr17 - 2943 3 genic_intron novelGene_289 novel NA NA NA NA no_subtype TRUE canonical NA NA 460 None 4 24 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4933.1 chr8 + 2580 1 novel_in_catalog LYN novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6653.4 chr11 + 2974 5 novel_in_catalog REXO2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2549 None 2 11 0 FALSE 0 0 NA C coding 138 414 33 446 PB.4938.2 chr8 + 2069 9 full-splice_match SDCBP ENST00000260130.8 2167 9 72 26 no_subtype FALSE canonical NA NA 920 None 108 11 2 FALSE 0 0 NA C coding 298 894 79 972 PB.6026.1 chr10 + 3204 21 full-splice_match ACSL5 ENST00000354655.8 3351 21 140 7 no_subtype FALSE canonical NA NA 2052 None 18 6 0 FALSE 0 0 NA C coding 683 2049 142 2190 PB.2655.2 chr3 + 2876 2 genic_intron novelGene_1351 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1984 None 4 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6938.1 chr12 + 2601 2 antisense novelGene_CCNT1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1611 None 2 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6026.2 chr10 + 2598 22 novel_not_in_catalog ACSL5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2323 None 5 9 1 TRUE 0 0 NA C coding 739 2217 98 2314 PB.9724.1 chr19 - 1393 11 novel_not_in_catalog FCER2 novel NA NA NA NA no_subtype FALSE canonical NA NA 113 None 18 3 0 TRUE 0 0 NA B coding 320 960 95 1054 PB.10698.1 chr22 - 1853 11 novel_not_in_catalog TBC1D10A novel NA NA NA NA no_subtype TRUE canonical NA NA 180 None 27 5 1 TRUE 0 0 NA A coding 420 1260 236 1495 PB.9724.3 chr19 - 1471 12 novel_not_in_catalog FCER2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 99 None 7 5 2 TRUE 0 0 NA B coding 321 963 188 1150 PB.9724.2 chr19 - 1515 12 novel_not_in_catalog FCER2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 132 None 20 4 1 TRUE 0 0 NA B coding 321 963 221 1183 PB.6808.1 chr12 + 5469 11 full-splice_match FOXJ2 ENST00000162391.7 5523 11 35 19 no_subtype FALSE canonical NA NA 2746 None 12 15 0 FALSE 0 0 NA A coding 574 1722 1111 2832 PB.5463.1 chr9 + 6527 1 intergenic novelGene_1019 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 48 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2463.12 chr3 - 1523 5 novel_not_in_catalog CNBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 102 None 3 3 1 TRUE 0 0 NA B coding 114 342 170 511 PB.9177.2 chr17 + 2870 1 novel_in_catalog NMT1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9177.1 chr17 + 1832 13 novel_not_in_catalog NMT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1478 None 8 0 0 TRUE 0 0 NA B coding 496 1488 9 1496 PB.5427.1 chr9 - 2836 8 novel_not_in_catalog CTNNAL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 206 None 3 9 0 TRUE 0 0 NA A coding 379 1137 66 1202 PB.3362.1 chr5 - 2993 1 genic_intron novelGene_768 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1240.2 chr2 + 3399 16 novel_not_in_catalog ZNF512 novel NA NA NA NA no_subtype TRUE canonical NA NA 1465 None 11 4 0 TRUE 0 0 NA C coding 567 1701 71 1771 PB.7946.1 chr14 + 1191 5 full-splice_match APOPT1 ENST00000409074.6 2523 5 25 1307 no_subtype FALSE canonical NA NA 491 None 2 3 0 FALSE 0 0 NA A coding 193 579 16 594 PB.8942.1 chr17 + 3109 2 full-splice_match TTC19 ENST00000465567.1 2801 2 -276 -32 no_subtype FALSE canonical NA NA 830 None 6 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6725.1 chr11 + 1919 8 full-splice_match FAM118B ENST00000360194.8 1616 8 0 -303 no_subtype FALSE canonical NA NA 1104 None 4 8 0 FALSE 0 0 NA C coding 350 1050 66 1115 PB.6725.3 chr11 + 1682 8 novel_not_in_catalog FAM118B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1158 None 2 4 0 FALSE 0 0 NA C coding 350 1050 120 1169 PB.6725.2 chr11 + 1612 9 novel_not_in_catalog FAM118B novel NA NA NA NA no_subtype FALSE canonical NA NA 1088 None 16 5 0 FALSE 0 0 NA C coding 351 1053 47 1099 PB.6100.1 chr10 + 1295 11 full-splice_match MTG1 ENST00000317502.10 1560 11 122 143 no_subtype FALSE canonical NA NA 793 None 27 2 0 FALSE 0 0 NA A coding 300 900 31 930 PB.7088.2 chr12 + 2948 3 incomplete-splice_match RASSF3 ENST00000542104.5 3492 5 536 8 internal_fragment FALSE canonical NA NA 151 None 2 21 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1735.1 chr2 + 1540 9 full-splice_match NUP35 ENST00000295119.8 1633 9 90 3 no_subtype FALSE canonical NA NA 916 None 10 1 0 FALSE 0 0 NA A coding 326 978 14 991 PB.1240.1 chr2 + 3412 14 full-splice_match ZNF512 ENST00000355467.5 3541 14 3 126 no_subtype FALSE canonical NA NA 1475 None 4 5 0 FALSE 0 0 NA C coding 567 1701 81 1781 PB.131.1 chr1 - 4007 3 full-splice_match ZNF436 ENST00000374608.3 3788 3 305 -524 no_subtype FALSE canonical NA NA 109 None 2 14 0 FALSE 0 0 NA A coding 470 1410 77 1486 PB.4918.1 chr8 - 2013 14 full-splice_match ATP6V1H ENST00000359530.6 2007 14 -8 2 no_subtype FALSE canonical NA NA 237 None 12 1 0 FALSE 0 0 NA A coding 480 1440 282 1721 PB.1048.1 chr1 - 1171 1 full-splice_match RP11-365D23.4 ENST00000432577.1 575 1 -99 -497 no_subtype FALSE canonical NA NA NA None 5 2 0 FALSE 0 0 NA A coding 133 399 100 498 PB.1240.4 chr2 + 2922 2 novel_not_in_catalog RP11-158I13.2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2643 None 2 12 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.1112.1 chr1 - 1415 7 full-splice_match C1orf131 ENST00000366651.7 1432 7 13 4 no_subtype FALSE canonical NA NA 142 None 5 5 0 FALSE 0 0 NA A coding 292 876 25 900 PB.1240.5 chr2 + 3314 15 novel_not_in_catalog ZNF512 novel NA NA NA NA no_subtype FALSE canonical NA NA 1378 None 2 4 0 TRUE 0 0 NA C coding 488 1464 221 1684 PB.10690.1 chr22 + 5911 15 novel_in_catalog NF2 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 2070 None 4 15 0 FALSE 0 0 NA C coding 543 1629 497 2125 PB.10690.2 chr22 + 6011 16 full-splice_match NF2 ENST00000338641.8 6025 16 8 6 no_subtype FALSE canonical NA NA 2170 None 29 14 0 FALSE 0 0 NA C coding 595 1785 434 2218 PB.10690.3 chr22 + 6649 15 novel_in_catalog NF2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2010 None 2 32 0 FALSE 0 0 NA C coding 550 1650 409 2058 PB.8181.2 chr15 - 6475 1 genic_intron novelGene_650 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 11 37 0 FALSE 0 0 NA A coding 125 375 4352 4726 PB.5341.1 chr9 - 3196 1 full-splice_match DDX10P2 ENST00000417796.1 2614 1 -79 -503 no_subtype FALSE canonical NA NA NA None 4 5 0 FALSE 0 0 NA C coding 332 996 1524 2519 PB.4988.1 chr8 - 6522 2 genic_intron novelGene_747 novel NA NA NA NA no_subtype TRUE canonical NA NA 6256 None 2 35 0 FALSE 0 0 NA A coding 107 321 3941 4261 PB.7959.126 chr14 - 1473 10 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 15 2 TRUE 0 0 NA B coding 473 1419 11 1429 PB.3461.2 chr5 - 6330 17 novel_not_in_catalog FNIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 186 None 2 23 0 TRUE 0 0 NA B coding 903 2709 95 2803 PB.3461.5 chr5 - 1588 3 novel_in_catalog FNIP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 188 None 2 9 0 FALSE 0 0 NA B coding 132 396 97 492 PB.3461.4 chr5 - 1735 1 genic_intron novelGene_1138 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6847.1 chr12 - 2672 12 full-splice_match WBP11 ENST00000261167.6 4646 12 63 1911 no_subtype FALSE canonical NA NA 126 None 123 5 0 FALSE 0 0 NA A coding 641 1923 172 2094 PB.3917.7 chr6 - 2623 1 novel_in_catalog CCND3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1607.1 chr2 + 3528 14 novel_not_in_catalog UBXN4 novel NA NA NA NA no_subtype FALSE canonical NA NA 2337 None 77 17 1 TRUE 0 0 NA B coding 508 1524 48 1571 PB.3917.4 chr6 - 1905 5 novel_not_in_catalog CCND3 novel NA NA NA NA no_subtype FALSE canonical NA NA 175 None 2 15 1 FALSE 0 0 NA C coding 211 633 290 922 PB.3917.3 chr6 - 1665 4 full-splice_match CCND3 ENST00000415497.6 1843 4 167 11 no_subtype FALSE canonical NA NA 227 None 20 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3917.2 chr6 - 2008 5 full-splice_match CCND3 ENST00000372991.8 2085 5 43 34 no_subtype FALSE canonical NA NA 354 None 91 9 0 FALSE 0 0 NA C coding 292 876 157 1032 PB.3917.1 chr6 - 1841 5 full-splice_match CCND3 ENST00000372988.8 2133 5 299 -7 no_subtype FALSE canonical NA NA 169 None 9 11 0 FALSE 0 0 NA C coding 211 633 215 847 PB.636.1 chr1 - 1552 10 full-splice_match ACP6 ENST00000583509.6 6923 10 229 5142 no_subtype FALSE canonical NA NA 438 None 20 1 0 FALSE 0 0 NA A coding 428 1284 220 1503 PB.1454.1 chr2 - 6294 34 full-splice_match POLR1A ENST00000263857.10 12749 34 300 6155 no_subtype FALSE canonical NA NA 156 None 5 14 1 FALSE 0 0 NA A coding 1720 5160 80 5239 PB.3177.1 chr5 - 3885 1 full-splice_match CTD-2199O4.6 ENST00000607861.1 441 1 -651 -2793 no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3062.1 chr4 + 3781 10 full-splice_match USP38 ENST00000307017.8 7009 10 28 3200 no_subtype FALSE canonical NA NA 3445 None 7 3 0 FALSE 0 0 NA A coding 1042 3126 479 3604 PB.10557.1 chr21 + 2772 24 novel_in_catalog TTC3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2574 None 5 3 0 FALSE 0 0 NA B coding 867 2601 170 2770 PB.4362.1 chr7 - 1548 10 full-splice_match NT5C3A ENST00000396152.6 1788 10 245 -5 no_subtype FALSE canonical NA NA 39 None 45 5 0 FALSE 0 0 NA C coding 297 891 59 949 PB.7630.5 chr14 + 1738 2 full-splice_match IRF9 ENST00000561412.1 608 2 -11 -1119 no_subtype FALSE canonical NA NA 46 None 3 7 0 FALSE 0 0 NA C coding 101 303 48 350 PB.3193.2 chr5 + 3310 10 novel_not_in_catalog C5orf22 novel NA NA NA NA no_subtype TRUE canonical NA NA 1277 None 14 13 0 TRUE 0 0 NA B coding 442 1326 79 1404 PB.3193.1 chr5 + 1615 1 novel_in_catalog C5orf22 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA B coding 64 192 103 294 PB.7630.6 chr14 + 1503 1 novel_in_catalog IRF9 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA C coding 101 303 853 1155 PB.7630.1 chr14 + 1297 9 full-splice_match IRF9 ENST00000396864.7 1838 9 247 294 no_subtype FALSE canonical NA NA 1147 None 17 1 0 FALSE 0 0 NA C coding 393 1179 41 1219 PB.1721.1 chr2 - 1615 8 full-splice_match PRKRA ENST00000325748.8 1826 8 69 142 no_subtype FALSE canonical NA NA 197 None 33 5 0 FALSE 0 0 NA A coding 313 939 133 1071 PB.7630.3 chr14 + 1648 10 novel_not_in_catalog IRF9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1538 None 21 3 0 TRUE 0 0 NA C coding 393 1179 48 1226 PB.7630.2 chr14 + 1698 8 novel_in_catalog IRF9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1551 None 2 7 0 FALSE 0 0 NA C coding 175 525 76 600 PB.4220.1 chr6 + 3654 18 full-splice_match SNX9 ENST00000392185.7 4198 18 -33 577 no_subtype FALSE canonical NA NA 1944 None 2 11 0 FALSE 0 0 NA C coding 595 1785 205 1989 PB.1857.7 chr2 - 2459 13 novel_in_catalog TMBIM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 38 None 2 6 0 FALSE 0 0 NA C coding 311 933 255 1187 PB.10656.1 chr22 + 2636 23 novel_not_in_catalog PPIL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2070 None 26 9 1 TRUE 0 0 NA B coding 520 1560 67 1626 PB.9373.1 chr17 - 1300 8 full-splice_match GALK1 ENST00000588479.5 1866 8 562 4 no_subtype FALSE canonical NA NA 178 None 11 0 0 FALSE 0 0 NA C coding 392 1176 14 1189 PB.9373.3 chr17 - 1472 7 novel_in_catalog GALK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 176 None 2 4 1 FALSE 0 0 NA C coding 267 801 557 1357 PB.9373.2 chr17 - 1555 6 novel_in_catalog GALK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 178 None 2 5 0 FALSE 0 0 NA C coding 161 483 14 496 PB.9302.11 chr17 - 1529 1 genic_intron novelGene_608 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10959.2 chrX - 1728 4 full-splice_match SLC35A2 ENST00000445167.7 1739 4 4 7 no_subtype FALSE canonical NA NA 120 None 2 8 0 FALSE 0 0 NA C coding 242 726 30 755 PB.10959.1 chrX - 3301 1 novel_in_catalog SLC35A2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 12 0 FALSE 0 0 NA C coding 350 1050 1138 2187 PB.7306.1 chr12 - 3616 11 full-splice_match PXN ENST00000424649.6 3683 11 62 5 no_subtype FALSE canonical NA NA 93 None 102 10 0 FALSE 0 0 NA C coding 557 1671 81 1751 PB.4887.1 chr8 - 1227 4 full-splice_match TM2D2 ENST00000456397.6 3263 4 35 2001 no_subtype FALSE canonical NA NA 286 None 11 4 0 FALSE 0 0 NA A coding 214 642 60 701 PB.3907.1 chr6 - 4326 6 novel_not_in_catalog TREML2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 148 None 2 21 0 TRUE 0 0 NA C coding 321 963 94 1056 PB.3907.2 chr6 - 3068 5 full-splice_match TREML2 ENST00000483722.1 3302 5 11 223 no_subtype FALSE canonical NA NA 230 None 84 10 0 FALSE 0 0 NA C coding 321 963 176 1138 PB.707.1 chr1 - 1481 1 incomplete-splice_match ADAR ENST00000368471.7 6515 15 5007 28 no_subtype FALSE canonical NA NA NA None 28 6 0 FALSE 0 0 NA B coding 122 366 629 994 PB.4513.11 chr7 - 5709 5 novel_not_in_catalog SAMD9L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 187 None 4 10 1 TRUE 0 0 NA B coding 1584 4752 649 5400 PB.1282.2 chr2 - 2689 1 incomplete-splice_match CDC42EP3 ENST00000611976.1 5124 2 2366 70 no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1282.3 chr2 - 1882 2 full-splice_match CDC42EP3 ENST00000295324.3 5700 2 521 3297 no_subtype FALSE canonical NA NA 245 None 26 9 0 FALSE 0 0 NA C coding 254 762 481 1242 PB.2433.1 chr3 + 1736 17 full-splice_match PDIA5 ENST00000316218.11 1799 17 60 3 no_subtype FALSE canonical NA NA 1514 None 20 2 0 FALSE 0 0 NA C coding 519 1557 36 1592 PB.8997.1 chr17 - 5358 5 full-splice_match SLC46A1 ENST00000612814.4 6376 5 74 944 no_subtype TRUE canonical NA NA 250 None 3 10 0 FALSE 0 0 NA A coding 459 1377 23 1399 PB.2947.3 chr4 + 3264 24 novel_not_in_catalog HERC5 novel NA NA NA NA no_subtype TRUE canonical NA NA 2787 None 2 10 0 TRUE 0 0 NA B coding 949 2847 144 2990 PB.2947.2 chr4 + 3423 26 novel_not_in_catalog HERC5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2935 None 87 5 0 TRUE 0 0 NA B coding 1024 3072 67 3138 PB.2947.1 chr4 + 2864 25 novel_not_in_catalog HERC5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2796 None 7 1 0 TRUE 0 0 NA B coding 944 2832 31 2862 PB.3688.1 chr5 - 3382 3 genic_intron novelGene_1338 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 858 None 2 21 1 FALSE 0 0 NA A coding 99 297 2877 3173 PB.10899.1 chrX + 3053 12 full-splice_match EIF2S3 ENST00000253039.8 2858 12 242 -437 no_subtype FALSE canonical NA NA 1366 None 28 9 0 FALSE 0 0 NA A coding 472 1416 12 1427 PB.5856.1 chr10 - 3366 9 full-splice_match AP3M1 ENST00000355264.8 5124 9 225 1533 no_subtype TRUE canonical NA NA 84 None 85 16 0 FALSE 0 0 NA A coding 418 1254 88 1341 PB.8740.13 chr16 - 3406 24 incomplete-splice_match GLG1 ENST00000422840.6 4748 26 479 863 5prime_fragment FALSE canonical NA NA 79 None 2 4 0 FALSE 0 0 NA C coding 980 2940 119 3058 PB.8740.11 chr16 - 3900 26 full-splice_match GLG1 ENST00000422840.6 4748 26 -24 872 no_subtype FALSE canonical NA NA 462 None 280 7 0 FALSE 0 0 NA C coding 1179 3537 25 3561 PB.981.1 chr1 + 5701 2 genic_intron novelGene_1380 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1252 None 2 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3167.1 chr5 - 2934 19 full-splice_match NSUN2 ENST00000264670.10 3303 19 232 137 no_subtype FALSE canonical NA NA 176 None 66 7 0 FALSE 0 0 NA A coding 767 2301 81 2381 PB.7259.2 chr12 + 1692 1 incomplete-splice_match SH2B3 ENST00000341259.6 5406 8 3710 5 no_subtype FALSE canonical NA NA NA None 8 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3828.1 chr6 - 3968 28 full-splice_match EHMT2 ENST00000375537.8 3965 28 -12 9 no_subtype TRUE canonical NA NA 61 None 30 5 0 FALSE 0 0 NA A coding 1210 3630 20 3649 PB.6058.1 chr10 + 2790 4 novel_in_catalog INPP5F novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 295 None 2 21 0 FALSE 0 0 NA B coding 441 1323 120 1442 PB.7259.1 chr12 + 4097 5 novel_not_in_catalog SH2B3 novel NA NA NA NA no_subtype TRUE canonical NA NA 535 None 3 22 1 TRUE 0 0 NA B coding 177 531 24 554 PB.7817.1 chr14 - 1732 7 full-splice_match PGF ENST00000555567.5 1927 7 187 8 no_subtype FALSE canonical NA NA 430 None 2 3 0 FALSE 0 0 NA A coding 170 510 356 865 PB.4897.1 chr8 - 2707 14 novel_not_in_catalog PLAT novel NA NA NA NA no_subtype FALSE canonical NA NA 245 None 3 5 0 FALSE 0 0 NA A coding 562 1686 272 1957 PB.3493.2 chr5 + 2767 2 novel_in_catalog TXNDC15 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2053 None 2 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5581.1 chr9 + 1550 1 incomplete-splice_match PRRC2B ENST00000320547.7 4950 5 3387 14 no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9804.1 chr19 - 1625 3 full-splice_match KLF1 ENST00000264834.4 1592 3 -17 -16 no_subtype FALSE canonical NA NA 145 None 4 4 0 FALSE 0 0 NA A coding 362 1086 59 1144 PB.3969.4 chr6 - 1748 1 incomplete-splice_match ELOVL5 ENST00000304434.10 2827 8 1071 9 no_subtype FALSE canonical NA NA NA None 6 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9098.2 chr17 - 1560 1 incomplete-splice_match IKZF3 ENST00000346872.7 9667 8 8100 8 no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6373.2 chr11 + 5685 2 antisense novelGene_AHNAK_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 5477 None 4 5 0 FALSE 0 0 NA A coding 290 870 2062 2931 PB.6373.3 chr11 - 6350 2 novel_not_in_catalog AHNAK novel NA NA NA NA no_subtype FALSE canonical NA NA 338 None 5 5 0 TRUE 0 0 NA C coding 1831 5493 24 5516 PB.7658.3 chr14 - 2798 3 novel_not_in_catalog CFL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 56 None 2 21 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.7658.2 chr14 - 3012 4 full-splice_match CFL2 ENST00000341223.7 3131 4 55 64 no_subtype FALSE canonical NA NA 100 None 2 13 0 FALSE 0 0 NA C coding 166 498 98 595 PB.7658.1 chr14 - 2801 4 full-splice_match CFL2 ENST00000298159.10 6747 4 53 3893 no_subtype FALSE canonical NA NA 100 None 52 12 0 FALSE 0 0 NA C coding 166 498 98 595 PB.9098.4 chr17 + 3144 1 antisense novelGene_IKZF3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 11 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10134.1 chr19 + 1364 4 full-splice_match CLEC11A ENST00000250340.8 1419 4 44 11 no_subtype FALSE canonical NA NA 679 None 6 3 0 FALSE 0 0 NA A coding 323 969 154 1122 PB.11199.8 chrX - 3439 20 novel_in_catalog ARHGAP4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 129 None 4 4 0 FALSE 0 0 NA C coding 641 1923 63 1985 PB.9552.3 chr18 + 2896 10 novel_not_in_catalog SLC14A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1334 None 2 16 1 FALSE 0 0 NA B coding 445 1335 171 1505 PB.824.1 chr1 - 2734 3 genic_intron novelGene_1282 novel NA NA NA NA no_subtype FALSE canonical NA NA 961 None 2 17 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.9261.1 chr17 + 1534 1 novel_in_catalog TSPOAP1-AS1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11199.1 chrX - 3187 21 novel_in_catalog ARHGAP4 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 164 None 11 2 0 FALSE 0 0 NA C coding 915 2745 98 2842 PB.8628.7 chr16 + 6746 50 novel_not_in_catalog NLRC5 novel NA NA NA NA no_subtype FALSE canonical NA NA 5656 None 58 3 1 TRUE 0 0 NA B coding 1866 5598 168 5765 PB.11199.3 chrX - 3165 21 full-splice_match ARHGAP4 ENST00000370016.5 3095 21 5 -75 no_subtype FALSE canonical NA NA 104 None 8 2 0 FALSE 0 0 NA C coding 925 2775 38 2812 PB.246.1 chr1 - 3285 4 novel_not_in_catalog SMIM12 novel NA NA NA NA no_subtype FALSE canonical NA NA 59 None 5 14 0 TRUE 0 0 NA A coding 187 561 362 922 PB.8690.2 chr16 + 1877 16 full-splice_match DUS2 ENST00000358896.10 1933 16 51 5 no_subtype FALSE canonical NA NA 1310 None 2 3 0 FALSE 0 0 NA C coding 467 1401 145 1545 PB.8690.3 chr16 + 1585 10 novel_in_catalog DUS2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1011 None 2 3 0 FALSE 0 0 NA C coding 368 1104 143 1246 PB.11199.7 chrX - 3399 21 novel_in_catalog ARHGAP4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 176 None 9 4 0 FALSE 0 0 NA C coding 641 1923 110 2032 PB.8690.1 chr16 + 3837 16 novel_not_in_catalog DUS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3272 None 2 11 0 FALSE 0 0 NA C coding 330 990 75 1064 PB.5791.1 chr10 + 1459 7 full-splice_match UBE2D1 ENST00000373910.8 2659 7 39 1161 no_subtype FALSE canonical NA NA 586 None 31 2 0 FALSE 0 0 NA A coding 147 441 189 629 PB.298.1 chr1 + 1393 10 novel_not_in_catalog NFYC novel NA NA NA NA no_subtype FALSE canonical NA NA 985 None 6 2 0 FALSE 0 0 NA B coding 335 1005 98 1102 PB.3134.1 chr4 - 1901 7 full-splice_match HPGD ENST00000296522.10 3027 7 411 715 no_subtype FALSE canonical NA NA 129 None 67 9 0 FALSE 0 0 NA A coding 266 798 37 834 PB.8482.1 chr16 + 2896 1 antisense novelGene_DCUN1D3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6610.5 chr11 - 3293 6 novel_not_in_catalog TMEM123 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 147 None 2 31 2 TRUE 0 0 NA C coding 177 531 231 761 PB.4729.2 chr7 + 3034 23 novel_not_in_catalog CUL1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2512 None 2 8 1 TRUE 0 0 NA B coding 776 2328 263 2590 PB.145.2 chr1 + 2599 8 novel_not_in_catalog NIPAL3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1725 None 9 14 2 TRUE 0 0 NA B coding 189 567 325 891 PB.145.1 chr1 + 3946 13 novel_not_in_catalog NIPAL3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1388 None 53 12 0 TRUE 0 0 NA B coding 406 1218 360 1577 PB.145.4 chr1 + 2625 8 novel_not_in_catalog NIPAL3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1764 None 2 21 2 TRUE 0 0 NA B coding 189 567 356 922 PB.5478.4 chr9 + 2831 17 novel_in_catalog CNTRL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2730 None 2 1 0 FALSE 0 0 NA B coding 850 2550 280 2829 PB.8305.1 chr15 + 1898 1 genic_intron novelGene_840 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1707.1 chr2 - 1861 11 novel_not_in_catalog CIR1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 130 None 4 11 2 TRUE 0 0 NA A coding 439 1317 59 1375 PB.5256.1 chr9 - 2670 3 full-splice_match TOPORS ENST00000360538.6 4098 3 -54 1482 no_subtype FALSE canonical NA NA 174 None 24 1 0 FALSE 0 0 NA A coding 766 2298 373 2670 PB.2041.7 chr3 - 2758 1 genic_intron novelGene_166 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6248.2 chr11 + 1543 1 genic_intron novelGene_287 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5288.2 chr9 + 3118 18 novel_not_in_catalog RECK novel NA NA NA NA no_subtype FALSE canonical NA NA 2128 None 2 5 0 TRUE 0 0 NA B coding 756 2268 69 2336 PB.2305.1 chr3 + 2930 9 full-splice_match PPP4R2 ENST00000356692.9 4984 9 40 2014 no_subtype FALSE canonical NA NA 1141 None 11 5 0 FALSE 0 0 NA A coding 417 1251 214 1464 PB.5288.1 chr9 + 4402 22 novel_not_in_catalog RECK novel NA NA NA NA no_subtype TRUE canonical NA NA 2779 None 8 6 0 TRUE 0 0 NA B coding 971 2913 86 2998 PB.4303.3 chr7 + 2640 2 full-splice_match ARL4A ENST00000404894.1 840 2 0 -1800 no_subtype FALSE canonical NA NA 94 None 16 13 0 FALSE 0 0 NA C coding 200 600 181 780 PB.3412.5 chr5 + 2638 1 genic_intron novelGene_994 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4303.1 chr7 + 2739 2 full-splice_match ARL4A ENST00000396664.2 1144 2 -59 -1536 no_subtype FALSE canonical NA NA 195 None 4 15 0 FALSE 0 0 NA C coding 200 600 282 881 PB.5426.1 chr9 + 1865 6 full-splice_match FAM206A ENST00000322940.10 2134 6 247 22 no_subtype FALSE canonical NA NA 467 None 2 6 0 FALSE 0 0 NA A coding 181 543 60 602 PB.1045.1 chr1 + 3949 15 novel_not_in_catalog RPS6KC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3011 None 2 9 0 FALSE 0 0 NA B coding 885 2655 465 3119 PB.5335.1 chr9 - 3153 7 full-splice_match GNA14 ENST00000341700.6 2482 7 -673 2 no_subtype FALSE canonical NA NA 1311 None 4 21 0 FALSE 0 0 NA A coding 355 1065 1188 2252 PB.355.2 chr1 - 2902 2 genic FOXD2-AS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 398 None 7 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2538.5 chr3 + 3726 2 novel_in_catalog MBNL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 161 None 2 22 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5788.1 chr10 - 1585 5 novel_not_in_catalog IPMK novel NA NA NA NA no_subtype FALSE canonical NA NA 516 None 5 6 0 FALSE 0 0 NA A coding 129 387 495 881 PB.355.1 chr1 + 5825 4 antisense novelGene_FOXD2-AS1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2220 None 2 47 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.2538.4 chr3 + 5509 10 full-splice_match MBNL1 ENST00000324210.9 5465 10 -29 -15 no_subtype FALSE canonical NA NA 2115 None 5 14 0 FALSE 0 0 NA C coding 382 1146 949 2094 PB.10326.2 chr20 + 2617 7 novel_not_in_catalog MAPRE1 novel NA NA NA NA no_subtype FALSE canonical NA NA 887 None 2 7 0 FALSE 0 0 NA C coding 268 804 138 941 PB.10326.1 chr20 + 2541 7 full-splice_match MAPRE1 ENST00000375571.5 2623 7 74 8 no_subtype FALSE canonical NA NA 815 None 53 10 0 FALSE 0 0 NA C coding 268 804 66 869 PB.1316.1 chr2 + 6032 3 genic_intron novelGene_461 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4708 None 3 27 2 FALSE 0 0 NA A coding 107 321 407 727 PB.5563.1 chr9 - 1594 3 novel_not_in_catalog ASB6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1148 None 8 11 2 TRUE 0 0 NA C coding 119 357 283 639 PB.4449.2 chr7 - 1645 6 full-splice_match BCL7B ENST00000482231.5 1638 6 18 -25 no_subtype FALSE canonical NA NA 193 None 7 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9611.1 chr18 + 1449 9 incomplete-splice_match ZNF236 ENST00000320610.13 7124 31 -80 5755 3prime_fragment FALSE canonical NA NA 1269 None 2 4 0 FALSE 0 0 NA B coding 456 1368 82 1449 PB.9963.2 chr19 + 2938 6 novel_not_in_catalog HKR1 novel NA NA NA NA no_subtype TRUE canonical NA NA 604 None 7 13 0 FALSE 0 0 NA C coding 644 1932 340 2271 PB.9963.3 chr19 + 2754 5 full-splice_match HKR1 ENST00000392153.7 2772 5 5 13 no_subtype FALSE canonical NA NA 424 None 2 4 0 FALSE 0 0 NA C coding 640 1920 169 2088 PB.6287.1 chr11 + 1268 10 novel_not_in_catalog ALKBH3 novel NA NA NA NA no_subtype FALSE canonical NA NA 923 None 2 1 1 FALSE 0 0 NA A coding 286 858 156 1013 PB.695.4 chr1 - 5405 28 novel_in_catalog DENND4B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 102 None 16 6 0 FALSE 0 0 NA B coding 1507 4521 93 4613 PB.10128.13 chr19 - 1518 11 novel_not_in_catalog NAPSB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 92 None 2 7 2 TRUE 0 0 NA C coding 182 546 971 1516 PB.9082.1 chr17 + 1539 8 full-splice_match MRPL45 ENST00000613675.4 1705 8 145 21 no_subtype FALSE canonical NA NA 850 None 15 1 0 FALSE 0 0 NA A coding 306 918 17 934 PB.6888.1 chr12 - 1347 14 full-splice_match ERGIC2 ENST00000360150.8 5014 14 -15 3682 no_subtype FALSE canonical NA NA 54 None 31 0 0 FALSE 0 0 NA A coding 377 1131 92 1222 PB.731.2 chr1 + 1865 14 novel_not_in_catalog MSTO2P novel NA NA NA NA no_subtype FALSE canonical NA NA 1479 None 2 3 1 TRUE 0 0 NA C coding 309 927 19 945 PB.5280.2 chr9 - 2843 9 novel_not_in_catalog CD72 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 105 None 3 7 1 TRUE 0 0 NA C coding 349 1047 55 1101 PB.5280.3 chr9 - 1482 10 novel_not_in_catalog CD72 novel NA NA NA NA no_subtype FALSE canonical NA NA 145 None 2 5 1 TRUE 0 0 NA C coding 137 411 64 474 PB.9103.4 chr17 - 3485 26 full-splice_match MED24 ENST00000394128.6 3479 26 -9 3 no_subtype FALSE canonical NA NA 54 None 6 4 1 FALSE 0 0 NA C coding 989 2967 92 3058 PB.5280.1 chr9 - 1532 9 full-splice_match CD72 ENST00000259633.8 1548 9 6 10 no_subtype FALSE canonical NA NA 200 None 34 5 1 FALSE 0 0 NA C coding 359 1077 119 1195 PB.5280.6 chr9 - 1453 9 novel_in_catalog CD72 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 121 None 2 6 1 FALSE 0 0 NA C coding 144 432 685 1116 PB.9103.3 chr17 - 3499 26 novel_in_catalog MED24 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 45 None 3 5 1 FALSE 0 0 NA C coding 989 2967 105 3071 PB.5280.4 chr9 - 1822 8 novel_in_catalog CD72 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 168 None 2 7 1 FALSE 0 0 NA C coding 119 357 87 443 PB.5280.5 chr9 - 1793 8 full-splice_match CD72 ENST00000490239.5 1799 8 2 4 no_subtype FALSE canonical NA NA 140 None 2 6 1 FALSE 0 0 NA C coding 144 432 1025 1456 PB.1795.1 chr2 - 2823 18 full-splice_match ORC2 ENST00000234296.6 4312 18 -22 1511 no_subtype FALSE canonical NA NA 213 None 7 8 1 FALSE 0 0 NA A coding 577 1731 273 2003 PB.2141.1 chr3 - 1849 1 antisense novelGene_LIMD1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 3 0 FALSE 0 0 NA B coding 229 687 975 1661 PB.10768.5 chr22 + 2700 11 novel_not_in_catalog APOBEC3C novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2384 None 4 15 0 TRUE 0 0 NA C coding 190 570 174 743 PB.5048.17 chr8 - 2843 6 full-splice_match YWHAZ ENST00000419477.6 891 6 -41 -1911 no_subtype FALSE canonical NA NA 132 None 3 9 0 FALSE 0 0 NA C coding 245 735 144 878 PB.5048.14 chr8 - 3210 8 novel_in_catalog YWHAZ novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 92 None 4 12 0 FALSE 0 0 NA C coding 245 735 509 1243 PB.5048.15 chr8 - 2738 6 novel_not_in_catalog YWHAZ novel NA NA NA NA no_subtype FALSE non_canonical NA NA 22 None 3 9 1 TRUE 0 0 NA C coding 245 735 37 771 PB.5048.12 chr8 - 3018 8 novel_not_in_catalog YWHAZ novel NA NA NA NA no_subtype FALSE non_canonical NA NA 92 None 2 19 2 TRUE 0 0 NA C coding 245 735 283 1017 PB.5048.13 chr8 - 2797 6 full-splice_match YWHAZ ENST00000395956.7 2974 6 131 46 no_subtype FALSE canonical NA NA 84 None 2 9 0 FALSE 0 0 NA C coding 245 735 96 830 PB.5048.10 chr8 - 2835 6 novel_not_in_catalog YWHAZ novel NA NA NA NA no_subtype FALSE non_canonical NA NA 78 None 3 11 1 TRUE 0 0 NA C coding 245 735 93 827 PB.5048.11 chr8 - 2791 6 novel_not_in_catalog YWHAZ novel NA NA NA NA no_subtype FALSE canonical NA NA 38 None 3 8 0 FALSE 0 0 NA C coding 245 735 50 784 PB.4998.1 chr8 - 1744 8 novel_not_in_catalog CA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 116 None 2 3 0 TRUE 0 0 NA C coding 261 783 80 862 PB.5460.3 chr9 - 5352 22 novel_not_in_catalog AKNA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 123 None 2 14 1 TRUE 0 0 NA B coding 1351 4053 237 4289 PB.4998.3 chr8 - 1274 8 full-splice_match CA1 ENST00000523022.5 1208 8 0 -66 no_subtype FALSE canonical NA NA 68 None 8 2 0 FALSE 0 0 NA C coding 261 783 93 875 PB.10768.7 chr22 + 2589 7 novel_not_in_catalog APOBEC3C novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2324 None 10 13 0 TRUE 0 0 NA C coding 190 570 66 635 PB.5460.6 chr9 - 5537 23 novel_not_in_catalog AKNA novel NA NA NA NA no_subtype TRUE canonical NA NA 123 None 6 9 1 TRUE 0 0 NA B coding 741 2223 2387 4609 PB.9824.26 chr19 + 3109 20 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2481 None 29 10 1 TRUE 0 0 NA C coding 810 2430 79 2508 PB.9103.1 chr17 - 3786 27 novel_not_in_catalog MED24 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 291 None 5 8 1 TRUE 0 0 NA C coding 1036 3108 248 3355 PB.3848.1 chr6 + 1424 1 full-splice_match B3GALT4 ENST00000451237.2 1694 1 268 2 no_subtype FALSE canonical NA NA NA None 10 1 0 FALSE 0 0 NA A coding 378 1134 21 1154 PB.10945.1 chrX + 1454 1 intergenic novelGene_473 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 2 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9996.1 chr19 - 1545 1 incomplete-splice_match AKT2 ENST00000476266.5 3309 10 1764 1 no_subtype FALSE canonical NA NA NA None 6 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4594.1 chr7 + 6806 12 novel_not_in_catalog PIK3CG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5770 None 2 26 0 TRUE 0 0 NA C coding 1102 3306 77 3382 PB.7247.1 chr12 - 2452 11 full-splice_match ANAPC7 ENST00000455511.7 3045 11 10 583 no_subtype FALSE canonical NA NA 194 None 2 3 0 FALSE 0 0 NA A coding 565 1695 94 1788 PB.3676.3 chr5 - 1600 13 full-splice_match PDLIM7 ENST00000359895.6 1567 13 -40 7 no_subtype FALSE canonical NA NA 74 None 33 7 1 FALSE 0 0 NA C coding 423 1269 86 1354 PB.2688.1 chr3 + 2652 7 novel_not_in_catalog NRROS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 407 None 2 13 3 TRUE 0 0 NA C coding 657 1971 405 2375 PB.10768.3 chr22 + 1076 4 full-splice_match APOBEC3C ENST00000361441.4 2818 4 206 1536 no_subtype FALSE canonical NA NA 528 None 15 1 0 FALSE 0 0 NA C coding 190 570 75 644 PB.5776.1 chr10 - 2565 5 incomplete-splice_match SGMS1 ENST00000361781.6 3744 11 1167 12 5prime_fragment FALSE canonical NA NA 416 None 2 3 0 FALSE 0 0 NA A coding 307 921 112 1032 PB.2688.4 chr3 + 1365 1 novel_in_catalog NRROS novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5683.1 chr10 + 3284 14 novel_in_catalog OPTN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1725 None 46 12 0 FALSE 0 0 NA B coding 571 1713 132 1844 PB.7254.7 chr12 - 3430 1 novel_in_catalog HVCN1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1959.1 chr2 + 3255 25 novel_not_in_catalog ANO7 novel NA NA NA NA no_subtype TRUE canonical NA NA 2704 None 2 6 1 TRUE 0 0 NA B coding 879 2637 76 2712 PB.5683.2 chr10 + 2744 1 novel_in_catalog OPTN novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 7 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3973.1 chr6 - 1880 1 genic_intron novelGene_554 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.288 chr14 - 1908 9 fusion IGHV4-34,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 82 None 2 18 2 TRUE 0 0 NA B coding 591 1773 16 1788 PB.6136.1 chr11 + 5779 3 genic_intron novelGene_22 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4394 None 2 30 1 FALSE 0 0 NA A coding 107 321 2426 2746 PB.4389.2 chr7 - 1667 2 full-splice_match C7orf25 ENST00000447342.5 1823 2 152 4 no_subtype FALSE canonical NA NA 24 None 4 2 0 FALSE 0 0 NA A coding 421 1263 46 1308 PB.3702.1 chr5 - 3955 2 full-splice_match ZFP62 ENST00000502412.1 3415 2 -22 -518 no_subtype FALSE canonical NA NA 81 None 6 15 0 FALSE 0 0 NA A coding 900 2700 81 2780 PB.9791.12 chr19 - 1561 7 novel_in_catalog MAN2B1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 213 None 11 1 0 FALSE 0 0 NA C coding 404 1212 55 1266 PB.3370.14 chr5 - 1485 1 novel_in_catalog MEF2C novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 14 3 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7254.4 chr12 - 1553 9 novel_not_in_catalog HVCN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 36 None 109 7 0 TRUE 0 0 NA B coding 273 819 140 958 PB.3370.12 chr5 - 2592 2 novel_in_catalog MEF2C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 109 None 2 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4924.1 chr8 + 1781 1 novel_in_catalog TGS1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4924.2 chr8 + 3455 14 novel_not_in_catalog TGS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2592 None 8 7 0 TRUE 0 0 NA B coding 853 2559 154 2712 PB.5792.1 chr10 - 5627 9 full-splice_match CCDC6 ENST00000263102.6 5811 9 182 2 no_subtype FALSE canonical NA NA 353 None 2 16 0 FALSE 0 0 NA A coding 474 1422 51 1472 PB.3766.1 chr6 + 2800 16 novel_not_in_catalog CAP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1387 None 33 5 0 TRUE 0 0 NA A coding 477 1431 34 1464 PB.3533.1 chr5 - 1554 2 antisense novelGene_IK_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 843 None 4 4 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7171.1 chr12 - 3090 3 novel_in_catalog USP44 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 94 None 4 8 0 FALSE 0 0 NA C coding 540 1620 174 1793 PB.1600.1 chr2 + 2692 4 genic_intron novelGene_1159 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2372 None 2 17 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.7254.2 chr12 - 1641 9 novel_not_in_catalog HVCN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 124 None 2 9 0 TRUE 0 0 NA B coding 273 819 228 1046 PB.10063.4 chr19 - 2657 13 novel_in_catalog DMPK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 298 None 2 12 1 FALSE 0 0 NA B coding 535 1605 139 1743 PB.2142.2 chr3 + 3506 6 novel_in_catalog SACM1L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1633 None 2 10 0 FALSE 0 0 NA C coding 116 348 1420 1767 PB.3615.15 chr5 + 2689 21 novel_not_in_catalog CYFIP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2319 None 3 0 0 TRUE 0 0 NA C coding 798 2394 91 2484 PB.10063.2 chr19 - 2790 16 novel_not_in_catalog DMPK novel NA NA NA NA no_subtype TRUE canonical NA NA 298 None 17 8 0 TRUE 0 0 NA B coding 630 1890 139 2028 PB.7422.1 chr13 + 3029 2 novel_not_in_catalog FRY novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1256 None 3 17 0 TRUE 0 0 NA B coding 136 408 1211 1618 PB.3615.19 chr5 + 2311 1 incomplete-splice_match CYFIP2 ENST00000521420.5 6370 30 4043 17 no_subtype FALSE canonical NA NA NA None 14 12 0 FALSE 0 0 NA C coding 106 318 417 734 PB.10039.1 chr19 + 1554 1 full-splice_match ZNF224 ENST00000589060.1 1552 1 -23 21 no_subtype FALSE canonical NA NA NA None 17 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4157.1 chr6 + 1548 1 full-splice_match RP11-43P8.2 ENST00000619829.1 285 1 -594 -669 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4746.1 chr7 + 1452 3 full-splice_match GIMAP1 ENST00000307194.5 4420 3 54 2914 no_subtype FALSE canonical NA NA 129 None 29 3 0 FALSE 0 0 NA A coding 306 918 87 1004 PB.5877.10 chr10 - 6782 5 novel_not_in_catalog ANXA11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 124 None 2 37 2 TRUE 0 0 NA C coding 197 591 3663 4253 PB.7257.1 chr12 - 3002 4 novel_not_in_catalog FAM109A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 134 None 18 6 0 TRUE 0 0 NA A coding 231 693 316 1008 PB.7959.282 chr14 - 1944 8 fusion IGHM,IGHV3-7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 2 15 3 TRUE 0 0 NA B coding 464 1392 433 1824 PB.7873.1 chr14 - 1910 15 novel_not_in_catalog LGMN novel NA NA NA NA no_subtype FALSE canonical NA NA 84 None 130 5 0 TRUE 0 0 NA B coding 433 1299 114 1412 PB.6784.11 chr12 - 6449 40 full-splice_match CHD4 ENST00000544040.5 6514 40 5 60 no_subtype FALSE canonical NA NA 120 None 3 9 1 FALSE 0 0 NA C coding 1905 5715 199 5913 PB.4030.5 chr6 - 1726 1 novel_in_catalog UBE2J1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7418.1 chr13 + 819 6 novel_not_in_catalog ALOX5AP novel NA NA NA NA no_subtype FALSE canonical NA NA 338 None 10 0 0 TRUE 0 0 NA B coding 161 483 16 498 PB.7861.4 chr14 - 6973 24 novel_not_in_catalog CCDC88C novel NA NA NA NA no_subtype FALSE canonical NA NA 41 None 2 12 0 TRUE 0 0 NA B coding 1187 3561 195 3755 PB.7418.2 chr13 + 5719 7 novel_not_in_catalog ALOX5AP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5462 None 4 25 4 TRUE 0 0 NA B coding 122 366 839 1204 PB.6044.1 chr10 - 3914 1 incomplete-splice_match PDZD8 ENST00000334464.6 9699 5 5595 191 no_subtype FALSE canonical NA NA NA None 10 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8404.1 chr16 - 2220 19 novel_not_in_catalog TRAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 104 None 11 1 0 TRUE 0 0 NA A coding 704 2112 17 2128 PB.10755.3 chr22 - 3516 10 novel_not_in_catalog TMEM184B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 88 None 2 24 2 TRUE 0 0 NA C coding 341 1023 361 1383 PB.7959.287 chr14 - 1902 9 fusion IGHV4-34,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 15 2 TRUE 0 0 NA B coding 375 1125 658 1782 PB.5697.2 chr10 + 1633 8 novel_in_catalog VIM novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1271 None 8 3 0 FALSE 0 0 NA C coding 194 582 22 603 PB.8339.2 chr16 + 462 3 full-splice_match HBA2 ENST00000251595.10 605 3 139 4 no_subtype FALSE canonical NA NA 227 None 5970 3 0 FALSE 0 0 NA C coding 110 330 24 353 PB.8339.3 chr16 + 595 4 novel_not_in_catalog HBA2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 337 None 5 10 2 TRUE 0 0 NA C coding 101 303 38 340 PB.6696.2 chr11 - 1672 1 incomplete-splice_match NECTIN1 ENST00000264025.7 5840 6 4121 48 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10480.3 chr20 - 3164 2 novel_not_in_catalog YTHDF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1298 None 3 38 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.8339.6 chr16 + 521 4 novel_not_in_catalog HBA2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 286 None 2 1 0 TRUE 0 0 NA C coding 125 375 38 412 PB.11051.1 chrX + 1753 11 full-splice_match PGK1 ENST00000373316.4 4887 11 97 3037 no_subtype FALSE canonical NA NA 1283 None 191 2 0 FALSE 0 0 NA C coding 417 1251 71 1321 PB.1182.3 chr2 + 3149 17 novel_not_in_catalog CPSF3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1906 None 2 12 0 TRUE 0 0 NA C coding 619 1857 121 1977 PB.1182.2 chr2 + 2256 18 full-splice_match CPSF3 ENST00000238112.7 2345 18 78 11 no_subtype TRUE canonical NA NA 2081 None 5 2 0 FALSE 0 0 NA C coding 684 2052 129 2180 PB.1182.1 chr2 + 2256 19 novel_not_in_catalog CPSF3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2073 None 3 3 0 TRUE 0 0 NA C coding 684 2052 121 2172 PB.7624.1 chr14 + 1383 9 novel_in_catalog DHRS2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 890 None 7 2 0 FALSE 0 0 NA A coding 280 840 160 999 PB.3667.1 chr5 + 1401 2 full-splice_match NSD1 ENST00000602285.1 1414 2 -9 22 no_subtype FALSE canonical NA NA 164 None 5 3 0 FALSE 0 0 NA A coding 328 984 182 1165 PB.6784.16 chr12 - 1979 12 incomplete-splice_match CHD4 ENST00000357008.6 6496 40 -42 4559 internal_fragment FALSE canonical NA NA 128 None 3 3 0 FALSE 0 0 NA C coding 591 1773 207 1979 PB.5151.2 chr8 - 1668 13 novel_not_in_catalog NAPRT novel NA NA NA NA no_subtype TRUE canonical NA NA 228 None 2 4 0 FALSE 0 0 NA C coding 371 1113 504 1616 PB.3964.4 chr6 + 2621 2 novel_not_in_catalog PAQR8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2275 None 3 7 1 TRUE 0 0 NA C coding 354 1062 59 1120 PB.10819.1 chr22 + 1556 8 full-splice_match PRR5 ENST00000336985.10 1878 8 319 3 no_subtype TRUE canonical NA NA 649 None 3 3 0 FALSE 0 0 NA A coding 293 879 244 1122 PB.5165.1 chr8 + 1834 10 novel_in_catalog GPAA1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1505 None 2 3 0 FALSE 0 0 NA C coding 348 1044 134 1177 PB.10314.9 chr20 + 2953 1 genic_intron novelGene_314 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3478.4 chr5 + 5434 2 novel_in_catalog TCF7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 62 None 2 29 0 FALSE 0 0 NA B coding 121 363 4995 5357 PB.10073.3 chr19 - 2875 8 full-splice_match SLC1A5 ENST00000542575.6 2882 8 0 7 no_subtype FALSE canonical NA NA 1195 None 99 9 0 FALSE 0 0 NA C coding 541 1623 630 2252 PB.10073.1 chr19 - 2911 9 novel_not_in_catalog SLC1A5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1195 None 3 7 0 TRUE 0 0 NA C coding 541 1623 630 2252 PB.9119.1 chr17 - 1372 6 full-splice_match KRT19 ENST00000361566.7 1390 6 7 11 no_subtype FALSE canonical NA NA 474 None 299 1 0 FALSE 0 0 NA A coding 400 1200 55 1254 PB.6422.1 chr11 + 1379 9 novel_not_in_catalog ZFPL1 novel NA NA NA NA no_subtype TRUE canonical NA NA 916 None 6 0 0 TRUE 0 0 NA A coding 310 930 168 1097 PB.10089.1 chr19 + 641 5 full-splice_match EMP3 ENST00000270221.10 876 5 235 0 no_subtype FALSE canonical NA NA 388 None 11 3 0 FALSE 0 0 NA A coding 163 489 67 555 PB.6390.1 chr11 + 1883 9 full-splice_match SLC3A2 ENST00000338663.11 1904 9 22 -1 no_subtype FALSE canonical NA NA 1357 None 38 4 0 FALSE 0 0 NA A coding 529 1587 131 1717 PB.8797.1 chr16 - 1975 12 novel_not_in_catalog KLHDC4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 200 None 7 1 0 FALSE 0 0 NA A coding 520 1560 102 1661 PB.1744.4 chr2 - 1362 1 incomplete-splice_match SLC40A1 ENST00000261024.6 3442 8 2066 15 no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.774.8 chr1 - 4054 4 novel_not_in_catalog AIM2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 130 None 2 30 2 TRUE 0 0 NA C coding 125 375 151 525 PB.9018.2 chr17 - 1662 1 antisense novelGene_TAOK1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 10 4 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2669.1 chr3 + 2975 3 novel_not_in_catalog CCDC50 novel NA NA NA NA no_subtype TRUE canonical NA NA 1739 None 3 21 2 TRUE 0 0 NA B coding 75 225 148 372 PB.5666.3 chr10 - 3302 19 novel_not_in_catalog PRKCQ novel NA NA NA NA no_subtype FALSE canonical NA NA 129 None 5 7 0 TRUE 0 0 NA B coding 706 2118 139 2256 PB.4453.1 chr7 - 1407 6 full-splice_match ABHD11 ENST00000222800.7 1483 6 71 5 no_subtype FALSE canonical NA NA 151 None 9 4 0 FALSE 0 0 NA A coding 306 918 27 944 PB.5666.1 chr10 - 2786 19 novel_not_in_catalog PRKCQ novel NA NA NA NA no_subtype FALSE canonical NA NA 95 None 10 5 0 TRUE 0 0 NA B coding 706 2118 105 2222 PB.7472.1 chr13 + 3740 4 genic_intron novelGene_457 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2132 None 2 29 3 FALSE 0 0 NA A coding 112 336 3354 3689 PB.774.2 chr1 - 1388 6 full-splice_match AIM2 ENST00000368130.8 1529 6 136 5 no_subtype FALSE canonical NA NA 133 None 29 0 0 FALSE 0 0 NA C coding 343 1029 154 1182 PB.774.3 chr1 - 3844 6 novel_not_in_catalog AIM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 134 None 2 20 0 FALSE 0 0 NA C coding 238 714 2922 3635 PB.1261.1 chr2 - 3644 9 full-splice_match NLRC4 ENST00000402280.5 3355 9 1 -290 no_subtype FALSE canonical NA NA 142 None 2 4 0 FALSE 0 0 NA A coding 1024 3072 261 3332 PB.774.5 chr1 - 5545 4 novel_not_in_catalog AIM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 188 None 2 42 1 TRUE 0 0 NA C coding 167 501 5043 5543 PB.774.6 chr1 - 969 4 incomplete-splice_match AIM2 ENST00000368130.8 1529 6 136 424 internal_fragment FALSE canonical NA NA 133 None 2 0 0 FALSE 0 0 NA C coding 272 816 154 969 PB.6941.2 chr12 + 2925 13 full-splice_match CACNB3 ENST00000301050.6 2696 13 -233 4 no_subtype FALSE canonical NA NA 1572 None 3 5 0 FALSE 0 0 NA C coding 484 1452 433 1884 PB.1622.1 chr2 - 2648 1 antisense novelGene_ARHGAP15_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 10 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7857.2 chr14 - 1308 1 antisense novelGene_CALM1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 3 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2932.1 chr4 - 2863 1 genic_intron novelGene_773 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A coding 128 384 674 1057 PB.2307.3 chr3 - 2767 2 genic_intron novelGene_689 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 35 None 3 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7857.1 chr14 - 2664 2 antisense novelGene_CALM1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1485 None 13 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4524.2 chr7 + 1958 1 genic_intron novelGene_890 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2028.1 chr3 - 2837 1 genic_intron novelGene_126 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8450.4 chr16 - 3672 2 novel_not_in_catalog PARN novel NA NA NA NA no_subtype TRUE canonical NA NA 963 None 2 16 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.8450.6 chr16 - 1659 1 genic_intron novelGene_121 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A coding 11 33 295 327 PB.8450.1 chr16 - 3035 24 full-splice_match PARN ENST00000437198.6 3078 24 41 2 no_subtype TRUE canonical NA NA 120 None 2 8 2 FALSE 0 0 NA C coding 639 1917 102 2018 PB.11197.1 chrX - 1336 13 full-splice_match IDH3G ENST00000217901.9 1485 13 142 7 no_subtype FALSE canonical NA NA 136 None 12 1 0 FALSE 0 0 NA A coding 335 1005 230 1234 PB.8450.3 chr16 - 2981 25 novel_not_in_catalog PARN novel NA NA NA NA no_subtype TRUE canonical NA NA 96 None 48 5 0 TRUE 0 0 NA C coding 639 1917 78 1994 PB.7036.1 chr12 + 1421 5 full-splice_match COQ10A ENST00000433805.6 1410 5 -14 3 no_subtype FALSE canonical NA NA 607 None 5 0 0 FALSE 0 0 NA A coding 215 645 128 772 PB.347.1 chr1 + 3470 6 full-splice_match NSUN4 ENST00000474844.5 2150 6 625 -1945 no_subtype FALSE canonical NA NA 903 None 2 11 0 FALSE 0 0 NA A coding 384 1152 26 1177 PB.7747.4 chr14 + 2956 3 genic_intron novelGene_588 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2568 None 3 17 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.2537.1 chr3 + 1423 3 full-splice_match SUCNR1 ENST00000362032.6 4181 3 0 2758 no_subtype FALSE canonical NA NA 120 None 2 1 0 FALSE 0 0 NA A coding 334 1002 106 1107 PB.2222.3 chr3 - 5570 24 novel_in_catalog DCAF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 115 None 3 3 0 FALSE 0 0 NA B coding 1507 4521 124 4644 PB.2222.2 chr3 - 5634 25 novel_not_in_catalog DCAF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 131 None 5 6 1 FALSE 0 0 NA B coding 1507 4521 187 4707 PB.8390.1 chr16 - 425 4 full-splice_match TCEB2 ENST00000409906.8 991 4 38 528 no_subtype FALSE canonical NA NA 23 None 2 1 0 FALSE 0 0 NA A coding 118 354 21 374 PB.3737.1 chr6 + 3291 1 genic_intron novelGene_89 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 44 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9463.1 chr18 + 1501 7 full-splice_match TYMS ENST00000323274.14 1662 7 74 87 no_subtype FALSE canonical NA NA 869 None 5 7 0 FALSE 0 0 NA A coding 313 939 66 1004 PB.8280.10 chr15 + 5600 5 antisense novelGene_HMGB1P8_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3689 None 3 45 2 FALSE 0 0 NA B coding 275 825 2378 3202 PB.3002.2 chr4 + 3173 7 novel_not_in_catalog CCDC109B novel NA NA NA NA no_subtype FALSE canonical NA NA 2975 None 3 23 1 TRUE 0 0 NA C coding 210 630 49 678 PB.6102.2 chr11 + 1649 2 novel_not_in_catalog PSMD13 novel NA NA NA NA no_subtype FALSE canonical NA NA 1131 None 2 13 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.8280.14 chr15 + 3352 2 novel_not_in_catalog ABHD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2270 None 2 24 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.6102.1 chr11 + 1570 13 full-splice_match PSMD13 ENST00000532097.5 1991 13 446 -25 no_subtype FALSE canonical NA NA 1093 None 189 1 0 FALSE 0 0 NA C coding 376 1128 59 1186 PB.3649.2 chr5 + 2601 1 genic_intron novelGene_1326 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A coding 9 27 444 470 PB.5824.1 chr10 + 3750 1 incomplete-splice_match EIF4EBP2 ENST00000373218.4 7257 3 3497 11 no_subtype FALSE canonical NA NA NA None 5 18 0 FALSE 0 0 NA B coding 141 423 1369 1791 PB.478.5 chr1 - 3301 4 incomplete-splice_match ZNF644 ENST00000337393.9 5763 6 230 2232 internal_fragment FALSE canonical NA NA 36 None 2 4 0 FALSE 0 0 NA C coding 1057 3171 129 3299 PB.478.4 chr1 - 3876 5 novel_not_in_catalog ZNF644 novel NA NA NA NA no_subtype FALSE canonical NA NA 46 None 2 5 0 FALSE 0 0 NA C coding 1057 3171 704 3874 PB.478.3 chr1 - 3277 4 novel_not_in_catalog ZNF644 novel NA NA NA NA no_subtype FALSE canonical NA NA 10 None 2 3 1 FALSE 0 0 NA C coding 1058 3174 103 3276 PB.478.2 chr1 - 5531 6 full-splice_match ZNF644 ENST00000337393.9 5763 6 220 12 no_subtype FALSE canonical NA NA 46 None 3 5 1 FALSE 0 0 NA C coding 1302 3906 139 4044 PB.478.1 chr1 - 1573 1 incomplete-splice_match ZNF644 ENST00000347275.9 2036 4 455 9 no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4546.1 chr7 - 2941 14 novel_not_in_catalog TAF6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 479 None 2 6 1 TRUE 0 0 NA B coding 269 807 539 1345 PB.4443.1 chr7 - 1560 11 novel_not_in_catalog NSUN5P2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 109 None 38 12 3 TRUE 0 0 NA A coding 237 711 555 1265 PB.4546.2 chr7 - 2849 15 novel_not_in_catalog TAF6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 487 None 10 7 1 TRUE 0 0 NA B coding 403 1209 547 1755 PB.4546.3 chr7 - 2716 16 novel_not_in_catalog TAF6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 480 None 87 5 1 TRUE 0 0 NA B coding 677 2031 540 2570 PB.1249.2 chr2 + 3490 19 novel_not_in_catalog WDR43 novel NA NA NA NA no_subtype FALSE canonical NA NA 1869 None 33 10 0 TRUE 0 0 NA B coding 677 2031 16 2046 PB.1249.1 chr2 + 1465 6 novel_not_in_catalog WDR43 novel NA NA NA NA no_subtype TRUE canonical NA NA 621 None 8 7 0 TRUE 0 0 NA B coding 269 807 16 822 PB.8798.2 chr16 + 1929 13 full-splice_match BANP ENST00000393208.6 2283 13 27 327 no_subtype FALSE non_canonical NA NA 1527 None 2 10 1 FALSE 0 0 NA A coding 490 1470 127 1596 PB.3528.1 chr5 + 2661 3 full-splice_match SLC35A4 ENST00000612662.1 2657 3 3 -7 no_subtype FALSE canonical NA NA 120 None 70 5 1 FALSE 0 0 NA A coding 317 951 747 1697 PB.7874.1 chr14 + 2816 13 full-splice_match GOLGA5 ENST00000163416.6 2969 13 148 5 no_subtype FALSE canonical NA NA 2223 None 54 4 0 FALSE 0 0 NA A coding 731 2193 109 2301 PB.1669.2 chr2 - 3009 14 incomplete-splice_match IFIH1 ENST00000263642.2 3595 16 20 566 internal_fragment FALSE canonical NA NA 829 None 13 3 0 FALSE 0 0 NA C coding 877 2631 377 3007 PB.6799.1 chr12 + 2758 13 novel_not_in_catalog C1S novel NA NA NA NA no_subtype FALSE canonical NA NA 1584 None 654 1 0 TRUE 0 0 NA B coding 688 2064 315 2378 PB.6799.2 chr12 + 4587 11 novel_not_in_catalog C1S novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3416 None 3 12 1 TRUE 0 0 NA B coding 365 1095 3116 4210 PB.6799.3 chr12 + 2637 13 novel_not_in_catalog C1S novel NA NA NA NA no_subtype FALSE canonical NA NA 1463 None 6 3 0 TRUE 0 0 NA B coding 688 2064 194 2257 PB.4460.1 chr7 - 1535 11 full-splice_match RFC2 ENST00000055077.7 1695 11 30 130 no_subtype FALSE canonical NA NA 144 None 25 4 0 FALSE 0 0 NA A coding 354 1062 32 1093 PB.9822.1 chr19 - 1632 4 full-splice_match ASF1B ENST00000263382.7 2059 4 380 47 no_subtype FALSE canonical NA NA 229 None 64 9 0 FALSE 0 0 NA C coding 202 606 121 726 PB.8158.1 chr15 + 3187 11 novel_not_in_catalog HACD3 novel NA NA NA NA no_subtype TRUE canonical NA NA 1145 None 75 17 1 FALSE 0 0 NA A coding 182 546 130 675 PB.2592.4 chr3 - 3021 1 antisense novelGene_FNDC3B_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.96 chr14 - 1478 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 12 2 TRUE 0 0 NA B coding 254 762 672 1433 PB.426.2 chr1 - 2581 13 novel_not_in_catalog WLS novel NA NA NA NA no_subtype FALSE canonical NA NA 331 None 35 3 0 TRUE 0 0 NA B coding 541 1623 226 1848 PB.10864.1 chrX + 2464 7 full-splice_match PRPS2 ENST00000380668.9 2511 7 42 5 no_subtype FALSE canonical NA NA 950 None 14 6 0 FALSE 0 0 NA A coding 318 954 87 1040 PB.426.1 chr1 - 2000 13 novel_not_in_catalog WLS novel NA NA NA NA no_subtype FALSE canonical NA NA 331 None 2 2 0 TRUE 0 0 NA B coding 545 1635 226 1860 PB.7959.77 chr14 - 1471 9 fusion IGHA1,CH17-262H11.1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 21 None 2 18 4 TRUE 0 0 NA B coding 466 1398 28 1425 PB.7959.75 chr14 - 1479 7 fusion IGHA1,IGHV4-61 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 3 13 3 TRUE 0 0 NA B coding 251 753 681 1433 PB.8539.1 chr16 + 2051 14 full-splice_match KIF22 ENST00000160827.8 2113 14 57 5 no_subtype TRUE canonical NA NA 1933 None 9 2 0 FALSE 0 0 NA A coding 652 1956 23 1978 PB.8827.2 chr17 - 1724 6 full-splice_match YWHAE ENST00000264335.12 2211 6 196 291 no_subtype FALSE canonical NA NA 136 None 2 11 0 FALSE 0 0 NA C coding 255 765 73 837 PB.8827.3 chr17 - 3200 4 novel_not_in_catalog YWHAE novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3092 None 2 28 1 TRUE 0 0 NA C coding 107 321 112 432 PB.7959.71 chr14 - 1488 8 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 3 10 2 TRUE 0 0 NA B coding 254 762 681 1442 PB.8827.1 chr17 - 765 1 incomplete-splice_match YWHAE ENST00000466227.6 1377 4 605 8 no_subtype FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1082.4 chr1 - 5482 22 novel_in_catalog TMEM63A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 28 None 2 29 0 FALSE 0 0 NA C coding 816 2448 43 2490 PB.4480.1 chr7 + 2504 2 novel_in_catalog PHTF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 171 None 2 18 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5103.1 chr8 - 3264 1 incomplete-splice_match FBXO32 ENST00000517956.5 6744 9 3250 231 no_subtype FALSE canonical NA NA NA None 59 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2126.3 chr3 - 3494 2 genic_intron novelGene_429 novel NA NA NA NA no_subtype FALSE canonical NA NA 3143 None 2 20 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.79 chr14 - 1451 8 fusion IGHV6-1,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 99 None 14 6 4 TRUE 0 0 NA B coding 254 762 644 1405 PB.7959.78 chr14 - 1417 5 fusion IGHA1,IGHV2-26 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 60 None 2 18 2 TRUE 0 0 NA A coding 251 753 619 1371 PB.4760.1 chr7 + 1735 2 novel_not_in_catalog PRKAG2-AS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 51 None 2 15 1 TRUE 0 0 NA A coding 119 357 880 1236 PB.10844.1 chr22 + 2028 20 full-splice_match NCAPH2 ENST00000420993.6 2037 20 8 1 no_subtype FALSE canonical NA NA 1791 None 2 3 0 FALSE 0 0 NA A coding 605 1815 115 1929 PB.2646.1 chr3 + 1995 6 novel_not_in_catalog RP11-443P15.2 novel NA NA NA NA no_subtype FALSE canonical NA NA 787 None 27 4 0 TRUE 0 0 NA B coding 153 459 506 964 PB.4856.2 chr8 + 3341 11 full-splice_match ESCO2 ENST00000305188.12 3922 11 169 412 no_subtype FALSE canonical NA NA 1742 None 6 36 0 FALSE 0 0 NA A coding 601 1803 70 1872 PB.1777.19 chr2 - 3322 10 novel_in_catalog SF3B1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 47 None 23 5 0 FALSE 0 0 NA C coding 342 1026 2297 3322 PB.6031.2 chr10 + 2765 1 genic_intron novelGene_1005 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1415.1 chr2 - 4239 5 full-splice_match RAB11FIP5 ENST00000258098.6 4342 5 100 3 no_subtype FALSE canonical NA NA 572 None 3 14 0 FALSE 0 0 NA A coding 653 1959 142 2100 PB.5036.1 chr8 + 3285 16 full-splice_match POP1 ENST00000401707.6 4719 16 9 1425 no_subtype FALSE canonical NA NA 2492 None 2 2 0 FALSE 0 0 NA A coding 1024 3072 73 3144 PB.1777.18 chr2 - 3029 11 novel_in_catalog SF3B1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 57 None 4 4 0 FALSE 0 0 NA C coding 343 1029 2000 3028 PB.2691.1 chr3 + 2671 15 novel_not_in_catalog PAK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1640 None 2 8 0 TRUE 0 0 NA B coding 524 1572 153 1724 PB.3846.1 chr6 - 2912 20 full-splice_match VPS52 ENST00000445902.2 2960 20 30 18 no_subtype FALSE canonical NA NA 279 None 30 6 0 FALSE 0 0 NA C coding 717 2151 208 2358 PB.3846.2 chr6 - 3019 19 novel_in_catalog VPS52 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 92 None 3 7 0 FALSE 0 0 NA C coding 467 1401 21 1421 PB.5990.1 chr10 + 1398 2 novel_in_catalog FBXL15 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1067 None 2 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4059.2 chr6 - 2727 21 full-splice_match SEC63 ENST00000369002.8 6411 21 -5 3689 no_subtype FALSE canonical NA NA 309 None 16 3 0 FALSE 0 0 NA C coding 760 2280 186 2465 PB.715.6 chr1 + 3544 4 novel_not_in_catalog ZBTB7B novel NA NA NA NA no_subtype FALSE canonical NA NA 1250 None 2 8 0 TRUE 0 0 NA C coding 539 1617 97 1713 PB.715.5 chr1 + 3723 3 full-splice_match ZBTB7B ENST00000535420.5 3777 3 50 4 no_subtype FALSE canonical NA NA 1424 None 3 10 0 FALSE 0 0 NA C coding 539 1617 271 1887 PB.715.4 chr1 + 3919 8 novel_not_in_catalog ZBTB7B novel NA NA NA NA no_subtype FALSE canonical NA NA 1618 None 2 11 1 TRUE 0 0 NA C coding 539 1617 465 2081 PB.715.3 chr1 + 3821 8 novel_not_in_catalog ZBTB7B novel NA NA NA NA no_subtype FALSE canonical NA NA 1526 None 2 8 0 TRUE 0 0 NA C coding 573 1719 271 1989 PB.715.2 chr1 + 3585 4 full-splice_match ZBTB7B ENST00000368426.3 3594 4 7 2 no_subtype FALSE canonical NA NA 1284 None 24 8 0 FALSE 0 0 NA C coding 539 1617 131 1747 PB.715.1 chr1 + 3616 4 novel_not_in_catalog ZBTB7B novel NA NA NA NA no_subtype FALSE canonical NA NA 1315 None 6 10 0 FALSE 0 0 NA C coding 539 1617 162 1778 PB.3576.5 chr5 - 1833 6 novel_not_in_catalog CSF1R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 181 None 2 5 0 TRUE 0 0 NA B coding 309 927 133 1059 PB.8868.1 chr17 - 1419 8 full-splice_match SLC25A11 ENST00000225665.11 1897 8 291 187 no_subtype FALSE canonical NA NA 145 None 27 2 0 FALSE 0 0 NA C coding 314 942 51 992 PB.4748.1 chr7 + 1091 7 novel_not_in_catalog TMEM176A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 800 None 5 3 0 FALSE 0 0 NA A coding 235 705 135 839 PB.8868.3 chr17 - 1802 8 novel_not_in_catalog SLC25A11 novel NA NA NA NA no_subtype FALSE canonical NA NA 525 None 2 4 0 FALSE 0 0 NA C coding 282 846 527 1372 PB.8868.2 chr17 - 1488 8 novel_not_in_catalog SLC25A11 novel NA NA NA NA no_subtype FALSE canonical NA NA 211 None 4 2 0 FALSE 0 0 NA C coding 282 846 213 1058 PB.8531.2 chr16 + 2517 13 novel_in_catalog CD19 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2319 None 5 10 0 FALSE 0 0 NA C coding 159 477 26 502 PB.8531.3 chr16 + 1742 16 novel_not_in_catalog CD19 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1543 None 2 15 3 TRUE 0 0 NA C coding 269 807 31 837 PB.8531.1 chr16 + 1878 15 full-splice_match CD19 ENST00000324662.7 1932 15 57 -3 no_subtype FALSE canonical NA NA 1673 None 25 2 0 FALSE 0 0 NA C coding 541 1623 33 1655 PB.8531.6 chr16 + 2195 14 novel_in_catalog CD19 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1996 None 4 9 0 FALSE 0 0 NA C coding 405 1215 764 1978 PB.4468.1 chr7 - 1281 13 novel_not_in_catalog TMEM120A novel NA NA NA NA no_subtype TRUE canonical NA NA 145 None 4 7 0 TRUE 0 0 NA A coding 343 1029 65 1093 PB.5941.6 chr10 - 2862 1 genic_intron novelGene_878 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A coding 190 570 1427 1996 PB.4111.2 chr6 + 1937 2 genic_intron novelGene_1064 novel NA NA NA NA no_subtype FALSE canonical NA NA 368 None 2 8 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10771.7 chr22 - 1766 9 novel_in_catalog RPL3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 29 None 2 7 0 FALSE 0 0 NA C coding 286 858 27 884 PB.10771.4 chr22 - 3154 7 novel_in_catalog RPL3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 25 None 3 20 0 FALSE 0 0 NA C coding 134 402 1868 2269 PB.10771.2 chr22 - 1287 10 full-splice_match RPL3 ENST00000216146.8 1442 10 148 7 no_subtype FALSE canonical NA NA 29 None 403 0 0 FALSE 0 0 NA C coding 403 1209 27 1235 PB.10771.1 chr22 - 2639 3 novel_in_catalog RPL3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 885 None 4 19 0 FALSE 0 0 NA C coding 119 357 699 1055 PB.717.1 chr1 + 1505 5 full-splice_match EFNA1 ENST00000368407.7 1926 5 416 5 no_subtype FALSE canonical NA NA 607 None 38 2 0 FALSE 0 0 NA A coding 205 615 103 717 PB.2151.1 chr3 + 1584 3 genic CCRL2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 127 None 2 3 0 TRUE 0 0 NA C coding 344 1032 143 1174 PB.4029.1 chr6 + 1417 2 full-splice_match PNRC1 ENST00000336032.3 2065 2 317 331 no_subtype FALSE canonical NA NA 340 None 58 1 0 FALSE 0 0 NA A coding 142 426 356 781 PB.11047.1 chrX - 2753 12 novel_not_in_catalog MAGT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 116 None 31 8 0 TRUE 0 0 NA B coding 335 1005 15 1019 PB.11047.3 chrX - 3848 12 novel_not_in_catalog MAGT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 117 None 7 18 1 TRUE 0 0 NA B coding 335 1005 16 1020 PB.11047.2 chrX - 3233 12 novel_not_in_catalog MAGT1 novel NA NA NA NA no_subtype TRUE canonical NA NA 104 None 2 18 1 TRUE 0 0 NA B coding 322 966 42 1007 PB.11047.4 chrX - 2781 11 novel_not_in_catalog MAGT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 118 None 25 10 0 TRUE 0 0 NA B coding 335 1005 17 1021 PB.7406.1 chr13 - 2683 2 antisense novelGene_RPL21_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 698 None 2 22 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10743.1 chr22 - 2059 8 full-splice_match MFNG ENST00000356998.7 2088 8 20 9 no_subtype FALSE canonical NA NA 459 None 65 5 0 FALSE 0 0 NA C coding 321 963 205 1167 PB.10743.2 chr22 - 1987 7 novel_in_catalog MFNG novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 470 None 4 4 0 FALSE 0 0 NA C coding 340 1020 216 1235 PB.5066.1 chr8 + 1223 11 full-splice_match EMC2 ENST00000220853.7 1243 11 14 6 no_subtype FALSE canonical NA NA 828 None 4 2 0 FALSE 0 0 NA A coding 297 891 22 912 PB.5694.1 chr10 - 3145 2 genic_intron novelGene_143 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2863 None 2 17 1 FALSE 0 0 NA A coding 117 351 1541 1891 PB.4979.1 chr8 - 2917 6 novel_not_in_catalog JPH1 novel NA NA NA NA no_subtype FALSE canonical NA NA 523 None 4 4 0 FALSE 0 0 NA A coding 661 1983 145 2127 PB.2717.18 chr4 + 2649 3 novel_in_catalog ADD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 760 None 2 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2717.19 chr4 + 1451 1 incomplete-splice_match ADD1 ENST00000513762.2 3581 6 2111 20 no_subtype FALSE canonical NA NA NA None 3 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.70.1 chr1 - 2742 4 genic_intron novelGene_132 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1535 None 2 27 3 FALSE 0 0 NA A coding 112 336 2 337 PB.2646.2 chr3 + 1992 5 novel_not_in_catalog RP11-443P15.2 novel NA NA NA NA no_subtype FALSE canonical NA NA 784 None 8 4 1 FALSE 0 0 NA B coding 153 459 503 961 PB.6679.3 chr11 + 3348 2 novel_not_in_catalog CXCR5 novel NA NA NA NA no_subtype FALSE canonical NA NA 682 None 2 8 1 FALSE 0 0 NA C coding 327 981 767 1747 PB.7103.1 chr12 + 2068 8 full-splice_match RAP1B ENST00000250559.13 13438 8 60 11310 no_subtype FALSE canonical NA NA 756 None 13 2 0 FALSE 0 0 NA C coding 184 552 172 723 PB.6679.1 chr11 + 2697 2 full-splice_match CXCR5 ENST00000292174.4 4431 2 194 1540 no_subtype FALSE canonical NA NA 33 None 189 6 0 FALSE 0 0 NA C coding 364 1092 7 1098 PB.7103.3 chr12 + 3873 8 novel_not_in_catalog RAP1B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2651 None 2 21 0 TRUE 0 0 NA C coding 133 399 2220 2618 PB.4166.2 chr6 + 3119 1 genic_intron novelGene_1203 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A coding 11 33 348 380 PB.6307.4 chr11 - 2755 17 novel_not_in_catalog ARFGAP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 98 None 187 16 2 TRUE 0 0 NA B coding 358 1074 520 1593 PB.4574.1 chr7 + 1938 1 antisense novelGene_MIR548O_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10999.1 chrX + 2729 6 full-splice_match KLF8 ENST00000468660.5 1543 6 -626 -560 no_subtype FALSE canonical NA NA 1812 None 9 6 0 FALSE 0 0 NA A coding 356 1068 924 1991 PB.7684.1 chr14 + 1745 13 full-splice_match KLHDC2 ENST00000298307.9 5514 13 546 3223 no_subtype FALSE canonical NA NA 1412 None 36 2 0 FALSE 0 0 NA A coding 406 1218 316 1533 PB.8852.8 chr17 - 4743 21 novel_not_in_catalog ATP2A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 264 None 4 18 1 FALSE 0 0 NA B coding 1031 3093 147 3239 PB.5442.1 chr9 + 1332 12 novel_not_in_catalog HSDL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1221 None 3 0 0 TRUE 0 0 NA B coding 418 1254 78 1331 PB.9016.1 chr17 - 2804 1 incomplete-splice_match NUFIP2 ENST00000225388.8 10850 4 6349 1698 no_subtype FALSE canonical NA NA NA None 4 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2272.1 chr3 + 1495 3 full-splice_match KCTD6 ENST00000404589.7 1533 3 0 38 no_subtype FALSE canonical NA NA 126 None 4 5 0 FALSE 0 0 NA A coding 237 711 100 810 PB.8852.2 chr17 - 5764 18 novel_not_in_catalog ATP2A3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 170 None 2 33 3 TRUE 0 0 NA B coding 409 1227 1292 2518 PB.4965.4 chr8 - 5539 23 full-splice_match NCOA2 ENST00000452400.6 8447 23 12 2896 no_subtype FALSE canonical NA NA 94 None 19 4 0 FALSE 0 0 NA C coding 1464 4392 171 4562 PB.10638.1 chr22 + 2133 9 novel_not_in_catalog TANGO2 novel NA NA NA NA no_subtype FALSE canonical NA NA 750 None 3 10 1 TRUE 0 0 NA B coding 276 828 41 868 PB.8852.6 chr17 - 4096 16 novel_in_catalog ATP2A3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 97 None 2 13 1 FALSE 0 0 NA B coding 792 2376 172 2547 PB.3222.1 chr5 + 3246 1 antisense novelGene_PRKAA1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8852.5 chr17 - 5616 19 novel_in_catalog ATP2A3 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 263 None 2 24 1 FALSE 0 0 NA B coding 768 2304 146 2449 PB.9759.1 chr19 - 1613 8 novel_not_in_catalog CDC37 novel NA NA NA NA no_subtype FALSE canonical NA NA 165 None 162 0 0 FALSE 0 0 NA C coding 173 519 677 1195 PB.2789.2 chr4 - 3244 10 novel_not_in_catalog RELL1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 161 None 37 24 2 TRUE 0 0 NA B coding 271 813 74 886 PB.9759.2 chr19 - 1729 7 full-splice_match CDC37 ENST00000591248.5 1377 7 -34 -318 no_subtype FALSE canonical NA NA 187 None 13 1 0 FALSE 0 0 NA C coding 199 597 86 682 PB.7199.1 chr12 - 3980 2 genic_intron novelGene_943 novel NA NA NA NA no_subtype TRUE canonical NA NA 2510 None 2 30 1 FALSE 0 0 NA A coding 231 693 400 1092 PB.5010.1 chr8 + 3139 7 full-splice_match OTUD6B ENST00000617869.4 3294 7 149 6 no_subtype FALSE canonical NA NA 837 None 14 15 0 FALSE 0 0 NA A coding 293 879 41 919 PB.6330.3 chr11 - 2833 14 novel_not_in_catalog SLC43A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 36 None 2 12 0 FALSE 0 0 NA C coding 472 1416 282 1697 PB.1450.2 chr2 + 1914 1 antisense novelGene_C2orf68_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6330.1 chr11 - 2629 14 full-splice_match SLC43A3 ENST00000395124.5 2617 14 -14 2 no_subtype FALSE canonical NA NA 74 None 17 10 0 FALSE 0 0 NA C coding 491 1473 320 1792 PB.7196.1 chr12 - 1272 10 full-splice_match NUP37 ENST00000552283.5 2372 10 12 1088 no_subtype FALSE canonical NA NA 63 None 5 0 0 FALSE 0 0 NA A coding 326 978 129 1106 PB.5572.1 chr9 - 2832 2 antisense novelGene_FUBP3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1961 None 4 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6703.39 chr11 + 6063 6 novel_not_in_catalog SORL1 novel NA NA NA NA no_subtype TRUE canonical NA NA 5695 None 2 19 1 TRUE 0 0 NA B coding 238 714 604 1317 PB.997.1 chr1 + 4022 10 full-splice_match MFSD4A ENST00000367147.8 4095 10 70 3 no_subtype FALSE canonical NA NA 1512 None 8 14 0 FALSE 0 0 NA C coding 514 1542 24 1565 PB.9679.11 chr19 - 3084 16 novel_not_in_catalog EEF2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 86 None 2 4 0 TRUE 0 0 NA C coding 456 1368 84 1451 PB.6470.2 chr11 - 4000 23 novel_not_in_catalog PC novel NA NA NA NA no_subtype FALSE canonical NA NA 52 None 12 0 0 TRUE 0 0 NA B coding 1178 3534 92 3625 PB.11206.45 chrX - 8229 47 full-splice_match FLNA ENST00000369856.7 8241 47 5 7 no_subtype FALSE canonical NA NA 345 None 43 1 0 FALSE 0 0 NA C coding 2620 7860 54 7913 PB.8553.2 chr16 + 1633 11 novel_in_catalog CORO1A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1419 None 7 2 0 FALSE 0 0 NA C coding 461 1383 139 1521 PB.8553.3 chr16 + 1605 12 novel_not_in_catalog CORO1A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1394 None 2 2 0 TRUE 0 0 NA C coding 461 1383 114 1496 PB.8553.1 chr16 + 1604 11 novel_not_in_catalog CORO1A novel NA NA NA NA no_subtype TRUE canonical NA NA 1389 None 5 2 1 FALSE 0 0 NA C coding 461 1383 109 1491 PB.8553.6 chr16 + 1588 11 novel_not_in_catalog CORO1A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1374 None 4 0 0 FALSE 0 0 NA C coding 461 1383 94 1476 PB.8553.7 chr16 + 1592 11 incomplete-splice_match CORO1A ENST00000570045.5 1622 12 139 -109 internal_fragment TRUE canonical NA NA 1378 None 2 1 0 FALSE 0 0 NA C coding 461 1383 98 1480 PB.8553.4 chr16 + 1465 11 full-splice_match CORO1A ENST00000219150.9 1803 11 298 40 no_subtype FALSE canonical NA NA 1288 None 529 0 0 FALSE 0 0 NA C coding 461 1383 8 1390 PB.10816.1 chr22 + 1375 13 full-splice_match PARVB ENST00000338758.11 5429 13 27 4027 no_subtype FALSE canonical NA NA 1054 None 40 1 0 FALSE 0 0 NA C coding 350 1050 79 1128 PB.8179.1 chr15 + 2708 7 novel_in_catalog PIAS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 837 None 24 8 0 FALSE 0 0 NA C coding 325 975 10 984 PB.8553.8 chr16 + 1468 10 incomplete-splice_match CORO1A ENST00000219150.9 1803 11 331 4 internal_fragment FALSE canonical NA NA 1255 None 7 0 0 FALSE 0 0 NA C coding 355 1065 293 1357 PB.4794.3 chr8 + 2770 2 novel_in_catalog MTMR9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 362 None 2 29 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4794.2 chr8 + 3638 1 novel_in_catalog MTMR9 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 30 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4794.1 chr8 + 3451 10 full-splice_match MTMR9 ENST00000221086.7 7481 10 390 3640 no_subtype FALSE canonical NA NA 1569 None 8 11 0 FALSE 0 0 NA C coding 549 1647 84 1730 PB.11206.42 chrX - 7967 47 novel_not_in_catalog FLNA novel NA NA NA NA no_subtype FALSE canonical NA NA 331 None 6 14 1 FALSE 0 0 NA C coding 2538 7614 40 7653 PB.2307.1 chr3 - 3583 10 full-splice_match PDZRN3 ENST00000263666.8 4248 10 594 71 no_subtype FALSE canonical NA NA 244 None 6 6 0 FALSE 0 0 NA A coding 856 2568 152 2719 PB.476.3 chr1 + 3099 3 full-splice_match LRRC8D ENST00000414841.1 666 3 143 -2576 no_subtype FALSE canonical NA NA 171 None 4 2 0 FALSE 0 0 NA C coding 858 2574 174 2747 PB.6450.1 chr11 + 783 7 full-splice_match DRAP1 ENST00000312515.6 989 7 167 39 no_subtype TRUE canonical NA NA 590 None 6 0 0 FALSE 0 0 NA A coding 205 615 79 693 PB.476.5 chr1 + 2487 1 incomplete-splice_match LRRC8D ENST00000394593.7 3345 3 852 7 no_subtype FALSE canonical NA NA NA None 3 2 0 FALSE 0 0 NA C coding 682 2046 89 2134 PB.476.4 chr1 + 3216 2 full-splice_match LRRC8D ENST00000527156.1 922 2 73 -2367 no_subtype FALSE canonical NA NA 287 None 26 3 0 FALSE 0 0 NA C coding 858 2574 290 2863 PB.2655.7 chr3 + 4148 3 genic_intron novelGene_1353 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3383 None 2 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3615.7 chr5 + 3767 30 novel_not_in_catalog CYFIP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3396 None 2 1 0 TRUE 0 0 NA C coding 1182 3546 16 3561 PB.2655.8 chr3 + 1552 3 novel_not_in_catalog ST6GAL1 novel NA NA NA NA no_subtype TRUE canonical NA NA 377 None 4 11 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.6649.5 chr11 - 6176 2 novel_not_in_catalog USP28 novel NA NA NA NA no_subtype FALSE canonical NA NA 1372 None 3 42 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.5018.2 chr8 + 4117 20 novel_not_in_catalog DPY19L4 novel NA NA NA NA no_subtype FALSE canonical NA NA 3389 None 2 15 1 TRUE 0 0 NA B coding 723 2169 45 2213 PB.5018.1 chr8 + 1342 6 novel_in_catalog DPY19L4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 573 None 2 5 0 FALSE 0 0 NA B coding 204 612 109 720 PB.3051.1 chr4 - 5985 3 genic_intron novelGene_1181 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1066 None 2 34 0 FALSE 0 0 NA A coding 106 318 656 973 PB.8882.1 chr17 - 2885 4 full-splice_match MED31 ENST00000225728.7 1654 4 54 -1285 no_subtype FALSE canonical NA NA 80 None 2 19 0 FALSE 0 0 NA A coding 131 393 53 445 PB.6860.2 chr12 + 2686 1 novel_in_catalog ETNK1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 11 18 0 FALSE 0 0 NA C coding 80 240 240 479 PB.6860.1 chr12 + 1646 3 novel_in_catalog ETNK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 629 None 6 3 0 FALSE 0 0 NA C coding 186 558 214 771 PB.3615.5 chr5 + 6159 30 novel_not_in_catalog CYFIP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3472 None 2 26 0 TRUE 0 0 NA C coding 1212 3636 27 3662 PB.2216.2 chr3 - 1396 11 full-splice_match NPRL2 ENST00000232501.7 1700 11 294 10 no_subtype FALSE canonical NA NA 223 None 6 0 0 FALSE 0 0 NA A coding 380 1140 146 1285 PB.4549.1 chr7 + 1210 5 full-splice_match PVRIG2P ENST00000435460.1 978 5 9 -241 no_subtype FALSE canonical NA NA 649 None 2 2 0 FALSE 0 0 NA A coding 162 486 140 625 PB.10553.1 chr21 + 1237 3 full-splice_match CBR1 ENST00000290349.10 1293 3 47 9 no_subtype FALSE canonical NA NA 525 None 8 3 0 FALSE 0 0 NA A coding 277 831 129 959 PB.5429.2 chr9 - 2958 17 novel_in_catalog TMEM245 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 580 None 13 2 0 FALSE 0 0 NA B coding 871 2613 2 2614 PB.5429.1 chr9 - 3024 18 novel_not_in_catalog TMEM245 novel NA NA NA NA no_subtype FALSE canonical NA NA 593 None 15 3 0 TRUE 0 0 NA B coding 871 2613 15 2627 PB.6166.1 chr11 - 1682 2 antisense novelGene_TRIM22_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 407 None 7 5 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3615.3 chr5 + 4128 33 novel_not_in_catalog CYFIP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3758 None 3 0 0 TRUE 0 0 NA C coding 1253 3759 165 3923 PB.6977.2 chr12 + 1701 8 novel_not_in_catalog DAZAP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1578 None 6 9 3 TRUE 0 0 NA C non_coding NA NA NA NA PB.6205.3 chr11 - 3637 21 full-splice_match EIF4G2 ENST00000396525.6 3346 21 -181 -110 no_subtype FALSE canonical NA NA 185 None 105 1 0 FALSE 0 0 NA C coding 663 1989 890 2878 PB.11122.1 chrX + 1808 3 full-splice_match PGRMC1 ENST00000217971.7 1911 3 99 4 no_subtype FALSE canonical NA NA 496 None 18 10 0 FALSE 0 0 NA A coding 195 585 13 597 PB.6205.1 chr11 - 3786 22 full-splice_match EIF4G2 ENST00000339995.9 3978 22 185 7 no_subtype FALSE canonical NA NA 221 None 1243 0 0 FALSE 0 0 NA C coding 701 2103 926 3028 PB.10596.1 chr21 + 2878 22 full-splice_match PFKL ENST00000349048.8 2912 22 25 9 no_subtype FALSE canonical NA NA 2225 None 588 8 1 FALSE 0 0 NA C coding 780 2340 31 2370 PB.6205.7 chr11 - 3552 22 novel_not_in_catalog EIF4G2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 38 None 3 2 0 TRUE 0 0 NA C coding 701 2103 684 2786 PB.6205.4 chr11 - 3549 22 novel_not_in_catalog EIF4G2 novel NA NA NA NA no_subtype FALSE canonical NA NA 38 None 2 1 1 FALSE 0 0 NA C coding 701 2103 681 2783 PB.10596.2 chr21 + 3566 21 novel_in_catalog PFKL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2913 None 4 13 0 FALSE 0 0 NA C coding 376 1128 51 1178 PB.3615.1 chr5 + 6442 33 novel_not_in_catalog CYFIP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3688 None 159 14 1 TRUE 0 0 NA C coding 1253 3759 95 3853 PB.10626.3 chr22 - 6137 1 novel_in_catalog HIRA novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 41 0 FALSE 0 0 NA A coding 152 456 5088 5543 PB.996.2 chr1 - 1669 1 genic NUAK2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5675.10 chr10 + 2645 2 genic_intron novelGene_78 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 262 None 6 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4033.1 chr6 - 3564 2 genic_intron novelGene_820 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 647 None 2 28 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.51 chr14 - 1496 6 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 2 12 2 TRUE 0 0 NA B coding 130 390 77 466 PB.6458.1 chr11 + 1824 6 full-splice_match RAB1B ENST00000311481.10 2007 6 122 61 no_subtype FALSE canonical NA NA 436 None 120 10 0 FALSE 0 0 NA A coding 201 603 26 628 PB.1013.1 chr1 + 6059 3 antisense novelGene_YOD1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 5768 None 6 32 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.31 chr14 - 1485 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 16 3 TRUE 0 0 NA B coding 254 762 674 1435 PB.3200.1 chr5 - 1707 6 full-splice_match C1QTNF3 ENST00000231338.7 1959 6 0 252 no_subtype FALSE canonical NA NA 172 None 3 7 0 FALSE 0 0 NA C coding 246 738 89 826 PB.3200.2 chr5 - 1925 6 full-splice_match C1QTNF3 ENST00000382065.7 2802 6 620 257 no_subtype FALSE canonical NA NA 390 None 3 5 0 FALSE 0 0 NA C coding 319 957 88 1044 PB.1473.1 chr2 + 5719 1 genic_intron novelGene_802 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 36 0 FALSE 0 0 NA A coding 145 435 219 653 PB.4120.2 chr6 - 6002 30 full-splice_match PTPRK ENST00000368226.8 6087 30 75 10 no_subtype FALSE canonical NA NA 341 None 5 5 1 FALSE 0 0 NA A coding 1440 4320 242 4561 PB.4120.3 chr6 - 2763 1 genic_intron novelGene_1105 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4541.3 chr7 + 2597 1 incomplete-splice_match ZKSCAN1 ENST00000535170.5 8758 4 2488 3674 no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4541.2 chr7 + 5531 6 full-splice_match ZKSCAN1 ENST00000324306.10 9418 6 32 3855 no_subtype FALSE canonical NA NA 1001 None 2 25 0 FALSE 0 0 NA C coding 562 1686 206 1891 PB.4541.1 chr7 + 2792 2 novel_not_in_catalog ZKSCAN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2666 None 3 14 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.7959.50 chr14 - 1524 9 fusion IGHV3-62,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 125 None 2 14 4 TRUE 0 0 NA B coding 254 762 716 1477 PB.8941.1 chr17 + 4013 4 genic CTD-3157E16.2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1158 None 2 44 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.7154.1 chr12 - 1766 3 genic_intron novelGene_845 novel NA NA NA NA no_subtype TRUE canonical NA NA 1200 None 2 17 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.2317.2 chr3 - 3353 1 full-splice_match CGGBP1 ENST00000398392.2 5298 1 1826 119 no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2317.1 chr3 - 3483 3 full-splice_match CGGBP1 ENST00000309534.10 4495 3 79 933 no_subtype FALSE canonical NA NA 155 None 34 14 0 FALSE 0 0 NA C coding 167 501 384 884 PB.7731.1 chr14 + 1544 13 full-splice_match ACTR10 ENST00000254286.8 2419 13 39 836 no_subtype TRUE non_canonical NA NA 1113 None 46 1 0 FALSE 0 0 NA A coding 417 1251 42 1292 PB.9494.1 chr18 - 2632 12 full-splice_match CEP76 ENST00000262127.6 2939 12 53 254 no_subtype FALSE canonical NA NA 236 None 2 1 0 FALSE 0 0 NA A coding 659 1977 174 2150 PB.1042.1 chr1 - 1223 6 full-splice_match NSL1 ENST00000366977.7 2317 6 7 1087 no_subtype FALSE canonical NA NA 246 None 11 0 0 FALSE 0 0 NA C coding 281 843 13 855 PB.10497.1 chr21 - 942 8 full-splice_match U2AF1L5 ENST00000610664.4 897 8 -52 7 no_subtype FALSE canonical NA NA 124 None 5 0 0 FALSE 0 0 NA C coding 240 720 81 800 PB.8186.1 chr15 - 1740 1 incomplete-splice_match TLE3 ENST00000627388.2 5742 19 4001 2 no_subtype FALSE canonical NA NA NA None 7 14 0 FALSE 0 0 NA A coding 101 303 203 505 PB.11225.1 chrX + 2577 8 full-splice_match VAMP7 ENST00000286448.11 2646 8 58 11 no_subtype FALSE canonical NA NA 701 None 17 7 0 FALSE 0 0 NA A coding 220 660 108 767 PB.3934.1 chr6 + 7530 40 novel_in_catalog CUL9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 7221 None 2 22 2 FALSE 0 0 NA A coding 1716 5148 54 5201 PB.96.1 chr1 - 6943 46 incomplete-splice_match UBR4 ENST00000375254.7 15906 106 8954 9 5prime_fragment FALSE canonical NA NA 77 None 2 2 0 FALSE 0 0 NA B coding 2184 6552 72 6623 PB.96.9 chr1 - 5698 37 incomplete-splice_match UBR4 ENST00000375254.7 15906 106 4437 5771 internal_fragment FALSE canonical NA NA 102 None 2 2 0 FALSE 0 0 NA B coding 1899 5697 2 5698 PB.9519.1 chr18 - 2710 10 full-splice_match SS18 ENST00000269137.11 1836 10 294 -1168 no_subtype FALSE canonical NA NA 107 None 37 6 0 FALSE 0 0 NA C coding 387 1161 39 1199 PB.3515.1 chr5 - 2997 9 novel_not_in_catalog DNAJC18 novel NA NA NA NA no_subtype FALSE canonical NA NA 100 None 11 10 1 TRUE 0 0 NA C coding 358 1074 61 1134 PB.8658.1 chr16 + 1694 5 full-splice_match CMTM3 ENST00000567572.5 1934 5 81 159 no_subtype FALSE canonical NA NA 581 None 17 5 0 FALSE 0 0 NA A coding 182 546 62 607 PB.10095.1 chr19 + 1581 2 full-splice_match FUT2 ENST00000522966.1 771 2 24 -834 no_subtype FALSE canonical NA NA 85 None 18 3 0 FALSE 0 0 NA A coding 343 1029 88 1116 PB.6555.2 chr11 - 5464 3 genic_intron novelGene_727 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 191 None 3 44 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.8949.2 chr17 - 1525 12 full-splice_match COPS3 ENST00000268717.9 1641 12 47 69 no_subtype FALSE canonical NA NA 115 None 38 0 0 FALSE 0 0 NA C coding 423 1269 61 1329 PB.8949.1 chr17 - 1448 11 novel_in_catalog COPS3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 115 None 3 0 0 FALSE 0 0 NA C coding 365 1095 61 1155 PB.3946.1 chr6 + 2650 12 full-splice_match HSP90AB1 ENST00000620073.4 2644 12 -41 35 no_subtype FALSE canonical NA NA 2285 None 2 6 0 FALSE 0 0 NA C coding 724 2172 221 2392 PB.9771.1 chr19 + 1197 7 full-splice_match C19orf38 ENST00000397820.4 1223 7 24 2 no_subtype FALSE canonical NA NA 626 None 2 6 0 FALSE 0 0 NA A coding 230 690 84 773 PB.3946.2 chr6 + 2516 12 full-splice_match HSP90AB1 ENST00000371646.9 2572 12 48 8 no_subtype FALSE canonical NA NA 2126 None 521 5 0 FALSE 0 0 NA C coding 724 2172 62 2233 PB.3946.5 chr6 + 3115 11 novel_in_catalog HSP90AB1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2749 None 2 15 0 FALSE 0 0 NA C coding 724 2172 685 2856 PB.4858.1 chr8 + 3117 16 novel_not_in_catalog ELP3 novel NA NA NA NA no_subtype TRUE canonical NA NA 2663 None 67 12 1 TRUE 0 0 NA A coding 547 1641 86 1726 PB.3168.1 chr5 + 1882 6 novel_not_in_catalog SRD5A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 870 None 3 8 0 TRUE 0 0 NA A coding 259 777 158 934 PB.2997.1 chr4 + 1822 8 full-splice_match HADH ENST00000309522.7 1912 8 76 14 no_subtype FALSE canonical NA NA 899 None 35 8 0 FALSE 0 0 NA A coding 314 942 74 1015 PB.5887.1 chr10 + 3419 6 novel_not_in_catalog MINPP1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2468 None 7 10 0 TRUE 0 0 NA A coding 487 1461 7 1467 PB.4108.1 chr6 - 2509 10 full-splice_match SERINC1 ENST00000339697.4 3137 10 -48 676 no_subtype FALSE canonical NA NA 172 None 85 6 0 FALSE 0 0 NA C coding 393 1179 314 1492 PB.4108.5 chr6 - 1560 2 novel_in_catalog SERINC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 116 None 3 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10604.7 chr21 - 2713 16 novel_not_in_catalog ITGB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 51 None 2 3 0 TRUE 0 0 NA C coding 444 1332 968 2299 PB.10604.6 chr21 - 2765 16 full-splice_match ITGB2 ENST00000302347.9 2955 16 151 39 no_subtype FALSE canonical NA NA 79 None 823 3 0 FALSE 0 0 NA C coding 769 2307 83 2389 PB.2708.4 chr4 + 2606 16 novel_not_in_catalog TACC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2381 None 2 6 1 TRUE 0 0 NA C coding 270 810 1635 2444 PB.10604.4 chr21 - 2731 16 novel_not_in_catalog ITGB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 7 None 16 4 1 FALSE 0 0 NA C coding 769 2307 11 2317 PB.4378.1 chr7 + 2680 3 novel_not_in_catalog GPR141 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 165 None 7 9 0 FALSE 0 0 NA A coding 305 915 180 1094 PB.10604.2 chr21 - 2710 16 novel_not_in_catalog ITGB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 79 None 3 6 1 TRUE 0 0 NA C coding 738 2214 83 2296 PB.10604.1 chr21 - 2607 5 novel_in_catalog ITGB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 819 None 6 10 0 FALSE 0 0 NA C coding 261 783 1414 2196 PB.2708.1 chr4 + 2820 16 full-splice_match TACC3 ENST00000313288.8 2781 16 -47 8 no_subtype FALSE canonical NA NA 2604 None 11 9 0 FALSE 0 0 NA C coding 838 2514 154 2667 PB.7959.177 chr14 - 1496 8 fusion IGHV4-28,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 21 4 TRUE 0 0 NA B coding 196 588 774 1361 PB.7959.176 chr14 - 1543 11 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 81 None 2 16 5 TRUE 0 0 NA B coding 196 588 821 1408 PB.7959.175 chr14 - 1572 10 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 81 None 2 16 4 TRUE 0 0 NA B coding 196 588 850 1437 PB.7959.174 chr14 - 1515 11 fusion IGHV4-61,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 3 14 6 TRUE 0 0 NA A coding 196 588 793 1380 PB.5720.1 chr10 + 2446 7 full-splice_match RAB18 ENST00000356940.10 4886 7 44 2396 no_subtype FALSE canonical NA NA 503 None 44 6 0 FALSE 0 0 NA A coding 206 618 59 676 PB.7959.172 chr14 - 1580 7 fusion IGHG1,IGHV3-7,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 118 None 2 7 3 TRUE 0 0 NA B coding 196 588 858 1445 PB.10604.9 chr21 - 2955 16 novel_in_catalog ITGB2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 234 None 37 8 0 FALSE 0 0 NA C coding 769 2307 238 2544 PB.10604.8 chr21 - 2927 17 novel_not_in_catalog ITGB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 117 None 10 4 0 FALSE 0 0 NA C coding 826 2478 41 2518 PB.5852.1 chr10 + 2700 1 antisense novelGene_NDST2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A coding 122 366 551 916 PB.10016.1 chr19 + 2061 5 novel_not_in_catalog CEACAM6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1060 None 4 11 0 FALSE 0 0 NA A coding 327 981 103 1083 PB.6677.1 chr11 + 1592 1 antisense novelGene_DDX6_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1559.1 chr2 - 1688 2 genic_intron novelGene_1010 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1582 None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9255.1 chr17 - 2689 1 novel_in_catalog VEZF1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8650.1 chr16 - 3408 1 incomplete-splice_match CSNK2A2 ENST00000563307.1 4978 5 1246 325 no_subtype FALSE canonical NA NA NA None 25 17 0 FALSE 0 0 NA A coding 140 420 2026 2445 PB.3851.12 chr6 + 2748 2 novel_not_in_catalog ZBTB9 novel NA NA NA NA no_subtype FALSE canonical NA NA 237 None 17 5 0 FALSE 0 0 NA C coding 473 1419 309 1727 PB.3851.13 chr6 + 2701 2 full-splice_match ZBTB9 ENST00000395064.2 2716 2 7 8 no_subtype FALSE canonical NA NA 190 None 3 6 0 FALSE 0 0 NA C coding 473 1419 262 1680 PB.3851.10 chr6 + 2929 12 novel_in_catalog PHF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2303 None 4 10 0 FALSE 0 0 NA C coding 237 711 1879 2589 PB.8697.2 chr16 - 5436 7 novel_not_in_catalog SMPD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1530 None 3 35 1 TRUE 0 0 NA B coding 102 306 795 1100 PB.6196.5 chr11 + 2787 1 incomplete-splice_match SWAP70 ENST00000318950.10 4882 12 2090 6 no_subtype FALSE canonical NA NA NA None 8 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6196.4 chr11 + 5862 1 novel_in_catalog SWAP70 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 29 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5740.4 chr10 - 3015 7 novel_in_catalog NRP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 384 None 2 4 0 FALSE 0 0 NA B coding 381 1143 312 1454 PB.5740.3 chr10 - 5573 17 novel_not_in_catalog NRP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 384 None 3 11 0 TRUE 0 0 NA B coding 906 2718 312 3029 PB.5740.2 chr10 - 2688 1 incomplete-splice_match NRP1 ENST00000374875.5 5407 16 2677 43 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B coding 126 378 291 668 PB.5740.1 chr10 - 4285 18 novel_not_in_catalog NRP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 385 None 27 2 0 TRUE 0 0 NA B coding 923 2769 313 3081 PB.6196.2 chr11 + 2092 11 novel_in_catalog SWAP70 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1616 None 2 2 0 FALSE 0 0 NA C coding 549 1647 74 1720 PB.6764.1 chr12 + 1812 3 full-splice_match RHNO1 ENST00000489288.6 1870 3 9 49 no_subtype FALSE canonical NA NA 311 None 12 7 0 FALSE 0 0 NA A coding 238 714 144 857 PB.2772.1 chr4 + 1400 2 full-splice_match SOD3 ENST00000382120.3 1526 2 124 2 no_subtype FALSE canonical NA NA 65 None 6 3 0 FALSE 0 0 NA A coding 240 720 82 801 PB.6685.3 chr11 - 4379 25 incomplete-splice_match HYOU1 ENST00000617285.4 4529 26 145 5 5prime_fragment FALSE canonical NA NA 71 None 2 13 0 FALSE 0 0 NA B coding 964 2892 86 2977 PB.1455.4 chr2 + 1914 7 novel_not_in_catalog PTCD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1250 None 2 7 0 TRUE 0 0 NA B coding 197 591 748 1338 PB.2331.1 chr3 - 3156 1 incomplete-splice_match DCBLD2 ENST00000326840.10 6122 16 2737 230 no_subtype FALSE canonical NA NA NA None 6 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5888.1 chr10 + 3731 13 novel_not_in_catalog PAPSS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1863 None 20 24 1 TRUE 0 0 NA C coding 257 771 1229 1999 PB.3501.2 chr5 - 1774 1 genic_intron novelGene_1171 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1925.2 chr2 - 3346 2 antisense novelGene_INPP5D_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 436 None 3 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8205.2 chr15 - 1775 7 full-splice_match EDC3 ENST00000315127.8 3763 7 32 1956 no_subtype FALSE canonical NA NA 132 None 36 3 0 FALSE 0 0 NA A coding 508 1524 151 1674 PB.3127.2 chr4 - 3059 2 novel_not_in_catalog HPF1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2811 None 2 35 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.513.1 chr1 - 3836 19 novel_not_in_catalog SASS6 novel NA NA NA NA no_subtype FALSE canonical NA NA 181 None 4 28 0 TRUE 0 0 NA A coding 657 1971 117 2087 PB.3127.1 chr4 - 3151 7 novel_in_catalog HPF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 68 None 3 15 0 FALSE 0 0 NA B coding 367 1101 21 1121 PB.5609.1 chr9 - 2064 1 incomplete-splice_match BRD3 ENST00000303407.11 5652 12 3497 92 no_subtype FALSE canonical NA NA NA None 11 9 0 FALSE 0 0 NA B coding 160 480 325 804 PB.10919.1 chrX + 2032 9 full-splice_match ATP6AP2 ENST00000636580.1 2337 9 89 216 no_subtype FALSE canonical NA NA 960 None 58 4 0 FALSE 0 0 NA A coding 350 1050 103 1152 PB.9743.1 chr19 - 3007 7 novel_not_in_catalog ZNF846 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 195 None 2 11 1 TRUE 0 0 NA A coding 496 1488 1028 2515 PB.6312.1 chr11 - 2940 2 novel_not_in_catalog RAPSN novel NA NA NA NA no_subtype TRUE canonical NA NA 1391 None 2 19 0 TRUE 0 0 NA A coding 101 303 1283 1585 PB.8254.3 chr15 + 2279 8 novel_not_in_catalog IL16 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1792 None 39 4 0 TRUE 0 0 NA B coding 631 1893 88 1980 PB.5888.4 chr10 + 3128 12 full-splice_match PAPSS2 ENST00000361175.8 3949 12 294 527 no_subtype FALSE canonical NA NA 1781 None 6 13 0 FALSE 0 0 NA C coding 614 1842 76 1917 PB.10253.1 chr20 - 3052 12 novel_not_in_catalog RASSF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 82 None 8 8 1 TRUE 0 0 NA B coding 326 978 115 1092 PB.5962.1 chr10 - 1559 10 novel_not_in_catalog GOT1 novel NA NA NA NA no_subtype TRUE canonical NA NA 177 None 23 0 0 TRUE 0 0 NA B coding 413 1239 60 1298 PB.10253.6 chr20 - 1448 11 novel_in_catalog RASSF2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 105 None 35 1 0 FALSE 0 0 NA B coding 326 978 138 1115 PB.10253.5 chr20 - 2370 1 incomplete-splice_match RASSF2 ENST00000478553.1 5201 9 2823 9 no_subtype FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10253.4 chr20 - 5381 11 novel_not_in_catalog RASSF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 121 None 2 25 0 FALSE 0 0 NA B coding 326 978 154 1131 PB.1988.1 chr3 - 2863 7 novel_not_in_catalog RPUSD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 600 None 4 11 1 TRUE 0 0 NA A coding 283 849 1804 2652 PB.9342.1 chr17 - 5961 24 novel_not_in_catalog SDK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 245 None 3 13 0 TRUE 0 0 NA A coding 1061 3183 401 3583 PB.6048.3 chr10 - 1594 4 incomplete-splice_match EIF3A ENST00000369144.7 6646 22 2928 2124 5prime_fragment FALSE canonical NA NA 726 None 2 3 0 FALSE 0 0 NA C coding 421 1263 84 1346 PB.6271.1 chr11 - 6084 2 antisense novelGene_CAT_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 5393 None 2 32 1 FALSE 0 0 NA A coding 111 333 3923 4255 PB.7586.4 chr13 - 3025 5 novel_not_in_catalog RASA3 novel NA NA NA NA no_subtype TRUE canonical NA NA 145 None 2 28 0 TRUE 0 0 NA B coding 120 360 2439 2798 PB.6995.2 chr12 - 1620 16 novel_in_catalog AAAS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 86 None 2 1 0 FALSE 0 0 NA C coding 229 687 915 1601 PB.6995.1 chr12 - 1747 16 full-splice_match AAAS ENST00000209873.8 1840 16 75 18 no_subtype FALSE canonical NA NA 214 None 14 1 0 FALSE 0 0 NA C coding 546 1638 92 1729 PB.5748.1 chr10 - 3058 6 full-splice_match ZNF25 ENST00000302609.7 4139 6 69 1012 no_subtype TRUE canonical NA NA 59 None 9 10 0 FALSE 0 0 NA A coding 456 1368 145 1512 PB.7611.1 chr14 + 1534 10 full-splice_match OXA1L ENST00000604262.5 1571 10 19 18 no_subtype FALSE canonical NA NA 1187 None 74 4 0 FALSE 0 0 NA A coding 433 1299 11 1309 PB.10905.1 chrX + 5434 37 novel_not_in_catalog POLA1 novel NA NA NA NA no_subtype TRUE canonical NA NA 4264 None 3 8 2 FALSE 0 0 NA A coding 1465 4395 13 4407 PB.620.1 chr1 + 1869 14 full-splice_match GPR89A ENST00000313835.13 2120 14 59 192 no_subtype FALSE canonical NA NA 1246 None 4 4 0 FALSE 0 0 NA A coding 455 1365 86 1450 PB.5946.1 chr10 - 5417 13 novel_not_in_catalog ARHGAP19 novel NA NA NA NA no_subtype TRUE canonical NA NA 74 None 2 41 0 TRUE 0 0 NA A coding 494 1482 19 1500 PB.6533.1 chr11 + 4236 14 full-splice_match SLCO2B1 ENST00000289575.9 4494 14 106 152 no_subtype FALSE canonical NA NA 2238 None 71 8 0 FALSE 0 0 NA C coding 709 2127 290 2416 PB.2339.2 chr3 + 1757 8 full-splice_match TFG ENST00000240851.8 1978 8 217 4 no_subtype FALSE canonical NA NA 943 None 26 6 0 FALSE 0 0 NA C coding 400 1200 124 1323 PB.9211.1 chr17 - 3317 2 novel_not_in_catalog PRAC1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 171 None 43 14 0 FALSE 0 0 NA A coding 98 294 35 328 PB.5568.7 chr9 - 5191 17 novel_not_in_catalog FNBP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 238 None 3 30 2 TRUE 0 0 NA B coding 552 1656 215 1870 PB.10020.1 chr19 - 751 5 full-splice_match RABAC1 ENST00000222008.10 821 5 60 10 no_subtype FALSE canonical NA NA 94 None 9 1 0 FALSE 0 0 NA A coding 185 555 39 593 PB.5736.1 chr10 + 3603 1 antisense novelGene_RP11-479G22.8_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3512.9 chr5 + 3776 15 novel_not_in_catalog MATR3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2717 None 2 4 0 FALSE 0 0 NA C coding 844 2532 234 2765 PB.1125.1 chr1 + 2708 1 genic_intron novelGene_1415 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 11 0 FALSE 0 0 NA A coding 142 426 1094 1519 PB.1083.1 chr1 + 2714 7 antisense novelGene_PYCR2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2489 None 3 18 2 FALSE 0 0 NA A coding 292 876 724 1599 PB.5826.3 chr10 - 1484 1 incomplete-splice_match PRF1 ENST00000373209.2 2492 3 1008 1 no_subtype FALSE canonical NA NA NA None 4 5 0 FALSE 0 0 NA C coding 15 45 733 777 PB.10161.1 chr19 + 1807 15 novel_not_in_catalog PRPF31 novel NA NA NA NA no_subtype FALSE canonical NA NA 1407 None 34 5 1 TRUE 0 0 NA A coding 499 1497 34 1530 PB.9980.1 chr19 - 1378 6 novel_not_in_catalog FBXO17 novel NA NA NA NA no_subtype FALSE canonical NA NA 199 None 2 6 0 FALSE 0 0 NA A coding 278 834 217 1050 PB.9636.3 chr19 + 6369 34 novel_not_in_catalog ABCA7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 6246 None 3 18 4 TRUE 0 0 NA B coding 389 1167 905 2071 PB.9636.2 chr19 + 6936 48 novel_not_in_catalog ABCA7 novel NA NA NA NA no_subtype FALSE canonical NA NA 6638 None 2 5 1 FALSE 0 0 NA B coding 2146 6438 354 6791 PB.3285.1 chr5 + 3064 2 genic_intron novelGene_589 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1260 None 2 25 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9636.4 chr19 + 6987 47 novel_not_in_catalog ABCA7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 6702 None 3 14 3 FALSE 0 0 NA B coding 1610 4830 189 5018 PB.6059.2 chr10 + 4192 19 full-splice_match SEC23IP ENST00000369075.7 7168 19 50 2926 no_subtype FALSE canonical NA NA 3045 None 14 4 0 FALSE 0 0 NA C coding 1000 3000 23 3022 PB.6059.1 chr10 + 4606 20 novel_not_in_catalog SEC23IP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3981 None 6 5 1 TRUE 0 0 NA C coding 1000 3000 68 3067 PB.8723.1 chr16 - 3271 2 incomplete-splice_match MTSS1L ENST00000338779.10 4992 15 1712 9 5prime_fragment FALSE canonical NA NA 34 None 10 27 0 FALSE 0 0 NA B coding 143 429 376 804 PB.3863.1 chr6 + 2761 1 genic_intron novelGene_337 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8723.2 chr16 - 2891 1 incomplete-splice_match MTSS1L ENST00000338779.10 4992 15 2094 8 no_subtype FALSE canonical NA NA NA None 3 28 0 FALSE 0 0 NA B coding 25 75 349 423 PB.4838.2 chr8 - 1453 1 incomplete-splice_match NKX3-1 ENST00000380871.4 3271 2 1812 7 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3512.2 chr5 + 2702 13 full-splice_match MATR3 ENST00000502499.5 2664 13 -42 4 no_subtype FALSE canonical NA NA 1645 None 3 1 0 FALSE 0 0 NA C coding 509 1527 167 1693 PB.4838.1 chr8 + 2632 1 incomplete-splice_match SLC25A37 ENST00000520654.1 3018 2 362 25 no_subtype FALSE canonical NA NA NA None 6 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1444.4 chr2 - 1312 10 full-splice_match CAPG ENST00000409724.5 1151 10 -23 -138 no_subtype FALSE canonical NA NA 114 None 3 0 0 FALSE 0 0 NA C coding 348 1044 128 1171 PB.3002.1 chr4 + 1150 8 full-splice_match CCDC109B ENST00000394650.6 2278 8 116 1012 no_subtype FALSE canonical NA NA 950 None 8 3 0 FALSE 0 0 NA C coding 336 1008 18 1025 PB.10604.19 chr21 - 2933 17 novel_not_in_catalog ITGB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 117 None 2 5 1 FALSE 0 0 NA C coding 828 2484 41 2524 PB.9767.1 chr19 - 3125 2 antisense novelGene_ILF3_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 670 None 2 25 1 FALSE 0 0 NA A coding 157 471 590 1060 PB.10604.17 chr21 - 2821 16 novel_in_catalog ITGB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 102 None 13 11 1 FALSE 0 0 NA C coding 769 2307 106 2412 PB.10604.16 chr21 - 2813 16 full-splice_match ITGB2 ENST00000397857.5 2813 16 -7 7 no_subtype FALSE canonical NA NA 92 None 2 5 0 FALSE 0 0 NA C coding 769 2307 96 2402 PB.10604.15 chr21 - 2874 17 novel_not_in_catalog ITGB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 89 None 2 13 2 TRUE 0 0 NA C coding 769 2307 157 2463 PB.10942.2 chrX + 1273 1 novel_in_catalog ARAF novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA B coding 78 234 252 485 PB.7942.3 chr14 + 3006 3 novel_not_in_catalog MARK3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1876 None 4 26 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.10942.1 chrX + 2374 17 novel_not_in_catalog ARAF novel NA NA NA NA no_subtype FALSE canonical NA NA 1791 None 24 3 0 TRUE 0 0 NA B coding 606 1818 106 1923 PB.8024.1 chr15 + 3860 24 full-splice_match GANC ENST00000318010.12 7781 24 2 3919 no_subtype FALSE canonical NA NA 2873 None 10 4 0 FALSE 0 0 NA C coding 914 2742 239 2980 PB.1545.1 chr2 + 3628 20 novel_not_in_catalog MERTK novel NA NA NA NA no_subtype TRUE canonical NA NA 2617 None 5 3 0 TRUE 0 0 NA A coding 999 2997 132 3128 PB.8024.3 chr15 + 4203 26 novel_not_in_catalog GANC novel NA NA NA NA no_subtype FALSE canonical NA NA 3216 None 2 16 1 FALSE 0 0 NA C coding 653 1959 1365 3323 PB.8024.2 chr15 + 3535 3 incomplete-splice_match GANC ENST00000562170.5 676 4 262 -3121 internal_fragment FALSE canonical NA NA 303 None 2 14 0 FALSE 0 0 NA C coding 104 312 2667 2978 PB.8291.2 chr15 + 1507 2 full-splice_match NGRN ENST00000331497.3 2784 2 255 1022 no_subtype FALSE canonical NA NA 485 None 94 3 0 FALSE 0 0 NA C coding 219 657 427 1083 PB.8291.1 chr15 + 1325 3 full-splice_match NGRN ENST00000379095.4 7237 3 -17 5929 no_subtype FALSE canonical NA NA 300 None 6 5 0 FALSE 0 0 NA C coding 291 873 26 898 PB.5918.1 chr10 + 2417 2 novel_not_in_catalog MARCH5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1560 None 2 22 1 TRUE 0 0 NA A coding 167 501 51 551 PB.1756.2 chr2 + 2815 3 novel_in_catalog GLS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2405 None 3 10 0 FALSE 0 0 NA B coding 127 381 2136 2516 PB.3138.2 chr4 + 2579 3 full-splice_match CDKN2AIP ENST00000302350.4 2646 3 60 7 no_subtype FALSE canonical NA NA 475 None 4 4 1 FALSE 0 0 NA C coding 325 975 838 1812 PB.1756.1 chr2 + 3750 13 incomplete-splice_match GLS ENST00000320717.7 4834 18 1073 11 internal_fragment FALSE canonical NA NA 1038 None 2 13 0 FALSE 0 0 NA B coding 337 1011 182 1192 PB.2020.1 chr3 + 6728 2 genic_intron novelGene_117 novel NA NA NA NA no_subtype TRUE canonical NA NA 5308 None 2 37 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.7942.4 chr14 + 1516 1 novel_in_catalog MARK3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3563.2 chr5 - 2842 1 incomplete-splice_match DPYSL3 ENST00000398514.7 5309 14 2466 2 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5978.1 chr10 - 2961 1 genic PDZD7 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 10 0 FALSE 0 0 NA A coding 106 318 1518 1835 PB.3563.1 chr5 - 3459 2 incomplete-splice_match DPYSL3 ENST00000398514.7 5309 14 1851 -1 5prime_fragment FALSE canonical NA NA 145 None 2 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9279.2 chr17 + 3652 27 novel_not_in_catalog BCAS3 novel NA NA NA NA no_subtype TRUE canonical NA NA 2811 None 2 6 0 TRUE 0 0 NA A coding 924 2772 74 2845 PB.3693.1 chr5 + 3667 16 novel_not_in_catalog CANX novel NA NA NA NA no_subtype FALSE canonical NA NA 1806 None 96 13 0 TRUE 0 0 NA C coding 592 1776 79 1854 PB.3693.2 chr5 + 4249 18 novel_not_in_catalog CANX novel NA NA NA NA no_subtype TRUE canonical NA NA 1921 None 2 16 1 TRUE 0 0 NA C coding 592 1776 194 1969 PB.1530.1 chr2 - 1484 6 full-splice_match FHL2 ENST00000393353.7 1531 6 38 9 no_subtype TRUE canonical NA NA 172 None 6 1 0 FALSE 0 0 NA C coding 279 837 197 1033 PB.1657.2 chr2 + 3330 11 novel_not_in_catalog MARCH7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2043 None 3 14 3 TRUE 0 0 NA B coding 648 1944 156 2099 PB.1335.2 chr2 - 4157 31 novel_not_in_catalog PSME4 novel NA NA NA NA no_subtype FALSE canonical NA NA 182 None 2 7 0 TRUE 0 0 NA A coding 1039 3117 333 3449 PB.3693.7 chr5 + 1634 1 genic CANX novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 49 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8457.1 chr16 - 7608 28 novel_not_in_catalog KIAA0430 novel NA NA NA NA no_subtype FALSE canonical NA NA 18 None 4 14 0 TRUE 0 0 NA B coding 1741 5223 80 5302 PB.4342.8 chr7 + 1699 12 incomplete-splice_match TAX1BP1 ENST00000265393.10 2478 17 80 699 3prime_fragment FALSE canonical NA NA 1636 None 2 0 0 FALSE 0 0 NA B coding 532 1596 103 1698 PB.4342.9 chr7 + 2748 2 novel_in_catalog TAX1BP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 84 None 2 20 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4342.6 chr7 + 2775 18 novel_not_in_catalog TAX1BP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2150 None 19 7 0 TRUE 0 0 NA B coding 746 2238 112 2349 PB.2761.2 chr4 + 1364 2 genic_intron novelGene_163 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 703 None 2 10 1 FALSE 0 0 NA A coding 49 147 173 319 PB.4342.4 chr7 + 2894 18 novel_not_in_catalog TAX1BP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2269 None 17 5 0 TRUE 0 0 NA B coding 789 2367 102 2468 PB.4342.5 chr7 + 2888 18 novel_not_in_catalog TAX1BP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2263 None 2 8 1 TRUE 0 0 NA B coding 779 2337 126 2462 PB.4342.2 chr7 + 2539 19 novel_not_in_catalog TAX1BP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2312 None 4 2 0 TRUE 0 0 NA B coding 803 2409 103 2511 PB.4342.3 chr7 + 3469 19 novel_not_in_catalog TAX1BP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2333 None 47 12 0 TRUE 0 0 NA B coding 813 2439 94 2532 PB.4342.1 chr7 + 2842 19 novel_not_in_catalog TAX1BP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2217 None 24 5 0 TRUE 0 0 NA B coding 771 2313 104 2416 PB.4721.3 chr7 + 1165 8 fusion TRBV7-5,TRBC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 943 None 4 3 1 TRUE 0 0 NA A coding 142 426 46 471 PB.4721.2 chr7 + 1151 8 fusion TRBV6-1,TRBC2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 922 None 2 16 3 TRUE 0 0 NA A coding 123 369 39 407 PB.4721.1 chr7 + 1176 8 fusion TRBC2,TRBV5-1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 947 None 3 6 0 TRUE 0 0 NA A coding 133 399 43 441 PB.4721.6 chr7 + 784 5 novel_not_in_catalog TRBC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 555 None 2 3 0 FALSE 0 0 NA A coding 11 33 547 579 PB.7896.2 chr14 - 3870 3 antisense novelGene_C14orf132_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 305 None 2 24 1 FALSE 0 0 NA A coding 100 300 3518 3817 PB.4721.4 chr7 + 1157 7 fusion TRBV12-4,TRBC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 935 None 2 3 1 TRUE 0 0 NA A coding 137 411 53 463 PB.8299.7 chr15 + 2936 8 incomplete-splice_match FURIN ENST00000610579.4 4191 16 1247 8 internal_fragment FALSE canonical NA NA 771 None 8 8 0 FALSE 0 0 NA C coding 402 1206 156 1361 PB.9644.1 chr19 - 5794 1 antisense novelGene_DAZAP1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 33 0 FALSE 0 0 NA A coding 103 309 3880 4188 PB.8299.3 chr15 + 4175 16 novel_not_in_catalog FURIN novel NA NA NA NA no_subtype FALSE canonical NA NA 2010 None 3 8 0 FALSE 0 0 NA C coding 794 2382 219 2600 PB.8299.2 chr15 + 4180 16 full-splice_match FURIN ENST00000610579.4 4191 16 2 9 no_subtype FALSE canonical NA NA 2016 None 2 20 1 FALSE 0 0 NA C coding 794 2382 225 2606 PB.8299.1 chr15 + 4240 16 full-splice_match FURIN ENST00000268171.7 4244 16 0 4 no_subtype FALSE canonical NA NA 2071 None 2 9 0 FALSE 0 0 NA C coding 794 2382 280 2661 PB.1786.2 chr2 - 3169 12 full-splice_match SATB2 ENST00000260926.9 5318 12 156 1993 no_subtype FALSE canonical NA NA 117 None 5 5 0 FALSE 0 0 NA A coding 733 2199 258 2456 PB.2666.1 chr3 - 3300 5 novel_not_in_catalog CLDN1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 462 None 4 13 0 TRUE 0 0 NA A coding 166 498 375 872 PB.7178.2 chr12 + 3501 14 novel_in_catalog NEDD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1887 None 4 9 0 FALSE 0 0 NA C coding 660 1980 10 1989 PB.914.1 chr1 + 3930 18 full-splice_match RGL1 ENST00000360851.3 4724 18 46 748 no_subtype FALSE canonical NA NA 2251 None 3 8 0 FALSE 0 0 NA A coding 768 2304 133 2436 PB.5940.1 chr10 - 3692 2 genic_intron novelGene_879 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1922 None 2 27 1 FALSE 0 0 NA B coding 185 555 550 1104 PB.5314.1 chr6 + 4033 6 full-splice_match DSE ENST00000359564.2 4037 6 1 3 no_subtype FALSE canonical NA NA 1345 None 2 6 0 FALSE 0 0 NA A coding 958 2874 228 3101 PB.628.2 chr1 + 1617 1 novel_in_catalog POLR3GL novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA C coding 27 81 246 326 PB.10938.4 chrX + 3381 24 full-splice_match RBM10 ENST00000329236.8 3201 24 -185 5 no_subtype FALSE canonical NA NA 3047 None 3 4 0 FALSE 0 0 NA C coding 995 2985 186 3170 PB.1962.3 chr2 + 3910 27 novel_not_in_catalog FARP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3072 None 6 6 0 TRUE 0 0 NA B coding 1054 3162 26 3187 PB.10938.6 chrX + 3262 23 novel_in_catalog RBM10 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2928 None 2 4 0 FALSE 0 0 NA C coding 617 1851 1201 3051 PB.39.1 chr1 + 2129 5 full-splice_match VAMP3 ENST00000054666.10 2205 5 72 4 no_subtype FALSE canonical NA NA 326 None 21 20 0 FALSE 0 0 NA A coding 100 300 44 343 PB.2319.1 chr3 + 2769 4 novel_not_in_catalog C3orf38 novel NA NA NA NA no_subtype FALSE canonical NA NA 691 None 3 15 0 TRUE 0 0 NA B coding 329 987 314 1300 PB.10938.3 chrX + 3328 24 full-splice_match RBM10 ENST00000377604.7 3747 24 419 0 no_subtype FALSE canonical NA NA 2990 None 78 2 1 FALSE 0 0 NA C coding 930 2790 324 3113 PB.10938.2 chrX + 3201 24 novel_not_in_catalog RBM10 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2863 None 3 5 1 TRUE 0 0 NA C coding 768 2304 683 2986 PB.8016.1 chr15 + 6613 31 full-splice_match MAPKBP1 ENST00000457542.6 7232 31 40 579 no_subtype FALSE canonical NA NA 4545 None 2 28 0 FALSE 0 0 NA A coding 1508 4524 247 4770 PB.3637.3 chr5 - 5741 1 genic_intron novelGene_1301 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 18 29 0 FALSE 0 0 NA A coding 102 306 3351 3656 PB.1307.1 chr2 + 2603 6 full-splice_match PPM1B ENST00000282412.8 2606 6 1 2 no_subtype FALSE canonical NA NA 1545 None 5 8 0 FALSE 0 0 NA C coding 479 1437 412 1848 PB.1307.2 chr2 + 3280 6 full-splice_match PPM1B ENST00000378551.6 3877 6 2 595 no_subtype FALSE canonical NA NA 1544 None 4 2 0 FALSE 0 0 NA C coding 387 1161 411 1571 PB.10499.1 chr21 + 664 1 antisense novelGene_CH507-513H4.6_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 39 0 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9150.1 chr17 + 1161 7 full-splice_match IFI35 ENST00000415816.6 1241 7 75 5 no_subtype FALSE canonical NA NA 817 None 2 4 0 FALSE 0 0 NA A coding 286 858 149 1006 PB.10736.1 chr22 + 1516 1 incomplete-splice_match CSF2RB ENST00000403662.7 4863 14 3338 10 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B coding 86 258 49 306 PB.2801.1 chr4 - 2648 2 full-splice_match TLR1 ENST00000505940.1 648 2 51 -2051 no_subtype FALSE canonical NA NA 47 None 18 0 0 FALSE 0 0 NA C coding 786 2358 115 2472 PB.1012.16 chr1 - 1691 2 novel_not_in_catalog PIGR novel NA NA NA NA no_subtype FALSE canonical NA NA 1251 None 2 8 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.2801.4 chr4 - 2700 2 full-splice_match TLR1 ENST00000508364.1 605 2 374 -2469 no_subtype FALSE canonical NA NA 93 None 10 1 0 FALSE 0 0 NA C coding 786 2358 161 2518 PB.2801.5 chr4 - 2761 3 novel_in_catalog TLR1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 62 None 7 1 1 FALSE 0 0 NA C coding 786 2358 222 2579 PB.7890.1 chr14 + 2817 1 antisense novelGene_DICER1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6010.1 chr10 - 2760 2 genic_intron novelGene_942 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1827 None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7166.1 chr12 - 3407 4 full-splice_match TMCC3 ENST00000261226.8 5877 4 47 2423 no_subtype FALSE canonical NA NA 163 None 9 13 0 FALSE 0 0 NA A coding 477 1431 86 1516 PB.69.1 chr1 + 5703 5 novel_not_in_catalog PRDM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 4562 None 4 9 0 TRUE 0 0 NA A coding 1476 4428 145 4572 PB.10018.2 chr19 + 1094 5 full-splice_match CD79A ENST00000221972.7 1258 5 160 4 no_subtype FALSE canonical NA NA 592 None 7 6 0 FALSE 0 0 NA C coding 226 678 26 703 PB.9685.2 chr19 + 1432 1 genic_intron novelGene_35 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10018.1 chr19 + 1029 5 full-splice_match CD79A ENST00000444740.2 567 5 -74 -388 no_subtype FALSE canonical NA NA 527 None 2 6 0 FALSE 0 0 NA C coding 188 564 75 638 PB.3727.1 chr6 - 1663 8 full-splice_match SSR1 ENST00000244763.8 9669 8 -3 8009 no_subtype FALSE canonical NA NA 169 None 228 4 0 FALSE 0 0 NA A coding 286 858 91 948 PB.2654.2 chr3 + 1876 11 full-splice_match EIF4A2 ENST00000323963.9 1919 11 36 7 no_subtype FALSE canonical NA NA 1107 None 163 3 0 FALSE 0 0 NA C coding 407 1221 29 1249 PB.2861.2 chr4 - 3482 10 novel_not_in_catalog SULT1B1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 43 None 2 11 2 TRUE 0 0 NA B coding 296 888 88 975 PB.7665.1 chr14 + 985 7 full-splice_match PSMA6 ENST00000261479.8 1029 7 35 9 no_subtype FALSE canonical NA NA 768 None 2 0 0 FALSE 0 0 NA A coding 246 738 86 823 PB.2861.1 chr4 - 4716 12 novel_not_in_catalog SULT1B1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 71 None 2 36 6 TRUE 0 0 NA B coding 296 888 116 1003 PB.6959.10 chr12 + 1472 7 novel_in_catalog TMBIM6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 515 None 3 4 0 FALSE 0 0 NA C coding 214 642 83 724 PB.10812.1 chr22 - 1368 4 full-splice_match MCAT ENST00000290429.10 2056 4 9 679 no_subtype FALSE canonical NA NA 460 None 4 1 0 FALSE 0 0 NA A coding 390 1170 38 1207 PB.6959.12 chr12 + 2706 9 full-splice_match TMBIM6 ENST00000395006.8 2598 9 80 -188 no_subtype FALSE canonical NA NA 648 None 35 14 0 FALSE 0 0 NA C coding 200 600 70 669 PB.10367.1 chr20 + 4011 15 novel_not_in_catalog SRC novel NA NA NA NA no_subtype TRUE canonical NA NA 1776 None 2 27 2 TRUE 0 0 NA A coding 536 1608 375 1982 PB.11117.2 chrX + 6702 53 full-splice_match DOCK11 ENST00000276202.8 6625 53 -81 4 no_subtype TRUE canonical NA NA 6246 None 12 2 0 FALSE 0 0 NA C coding 2073 6219 145 6363 PB.10704.1 chr22 - 4426 28 novel_not_in_catalog MORC2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1210 None 2 17 0 TRUE 0 0 NA A coding 1032 3096 1143 4238 PB.5661.1 chr10 - 1692 8 novel_not_in_catalog IL15RA novel NA NA NA NA no_subtype FALSE canonical NA NA 266 None 4 3 0 TRUE 0 0 NA C coding 231 693 291 983 PB.4106.1 chr6 + 2889 1 incomplete-splice_match GJA1 ENST00000282561.3 3037 2 141 8 no_subtype FALSE canonical NA NA NA None 16 24 0 FALSE 0 0 NA A coding 382 1146 17 1162 PB.5661.3 chr10 - 1507 6 full-splice_match IL15RA ENST00000528354.5 1037 6 -66 -404 no_subtype FALSE canonical NA NA 184 None 2 4 0 FALSE 0 0 NA C coding 234 702 97 798 PB.5661.2 chr10 - 1589 7 full-splice_match IL15RA ENST00000379977.7 1626 7 10 27 no_subtype FALSE canonical NA NA 176 None 8 3 0 FALSE 0 0 NA C coding 267 801 89 889 PB.10117.3 chr19 - 1941 15 novel_in_catalog PNKP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 80 None 2 6 0 FALSE 0 0 NA C coding 385 1155 94 1248 PB.2886.1 chr4 - 1270 4 full-splice_match CXCL11 ENST00000306621.7 1606 4 161 175 no_subtype FALSE canonical NA NA 110 None 7 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7091.1 chr12 - 1856 12 novel_not_in_catalog WIF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 153 None 3 4 1 TRUE 0 0 NA A coding 317 951 386 1336 PB.2842.3 chr4 - 3017 6 full-splice_match SGCB ENST00000381431.9 4431 6 190 1224 no_subtype FALSE canonical NA NA 66 None 8 11 0 FALSE 0 0 NA C coding 318 954 34 987 PB.2842.2 chr4 - 2995 7 novel_not_in_catalog SGCB novel NA NA NA NA no_subtype FALSE canonical NA NA 55 None 2 11 0 TRUE 0 0 NA C coding 318 954 23 976 PB.2842.1 chr4 - 4195 8 novel_not_in_catalog SGCB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 45 None 7 16 2 TRUE 0 0 NA C coding 318 954 13 966 PB.741.3 chr1 + 3143 11 novel_in_catalog LMNA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2920 None 17 5 0 FALSE 0 0 NA C coding 572 1716 209 1924 PB.8139.1 chr15 - 2708 14 novel_not_in_catalog DAPK2 novel NA NA NA NA no_subtype TRUE canonical NA NA 111 None 6 8 1 TRUE 0 0 NA A coding 360 1080 148 1227 PB.7363.1 chr12 - 4512 29 novel_not_in_catalog DHX37 novel NA NA NA NA no_subtype TRUE canonical NA NA 195 None 7 12 2 TRUE 0 0 NA A coding 1157 3471 90 3560 PB.9666.2 chr19 + 3662 16 novel_not_in_catalog NCLN novel NA NA NA NA no_subtype FALSE canonical NA NA 2850 None 40 11 0 TRUE 0 0 NA A coding 562 1686 102 1787 PB.45.1 chr1 + 3102 4 novel_not_in_catalog SPSB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2324 None 3 15 1 TRUE 0 0 NA C coding 273 819 360 1178 PB.45.2 chr1 + 1434 3 full-splice_match SPSB1 ENST00000328089.10 3120 3 16 1670 no_subtype FALSE canonical NA NA 1019 None 2 4 0 FALSE 0 0 NA C coding 273 819 326 1144 PB.9666.1 chr19 + 1420 1 full-splice_match S1PR4 ENST00000246115.4 1565 1 142 3 no_subtype FALSE canonical NA NA NA None 66 5 0 FALSE 0 0 NA C coding 310 930 106 1035 PB.10471.1 chr20 + 2923 1 incomplete-splice_match FAM217B ENST00000360816.7 5036 4 2109 5 no_subtype FALSE canonical NA NA NA None 5 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5385.2 chr9 - 3876 16 novel_not_in_catalog FANCC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 170 None 3 22 1 TRUE 0 0 NA B coding 558 1674 249 1922 PB.4408.3 chr7 + 3750 17 full-splice_match ZMIZ2 ENST00000265346.11 3643 17 48 -155 no_subtype FALSE canonical NA NA 2574 None 2 4 0 FALSE 0 0 NA C coding 891 2673 7 2679 PB.6961.3 chr12 - 3111 18 novel_not_in_catalog RACGAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 110 None 6 7 0 TRUE 0 0 NA B coding 632 1896 118 2013 PB.4408.1 chr7 + 3908 19 full-splice_match ZMIZ2 ENST00000309315.8 5144 19 41 1195 no_subtype FALSE canonical NA NA 2737 None 2 5 0 FALSE 0 0 NA C coding 860 2580 263 2842 PB.7699.1 chr14 + 1398 8 full-splice_match TMX1 ENST00000457354.6 3995 8 106 2491 no_subtype FALSE canonical NA NA 683 None 18 3 0 FALSE 0 0 NA A coding 280 840 20 859 PB.2530.1 chr3 + 1630 2 genic_intron novelGene_1238 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 916 None 2 9 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.86.6 chr1 + 1581 1 incomplete-splice_match SZRD1 ENST00000401089.3 3447 3 1864 3 no_subtype FALSE canonical NA NA NA None 12 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.453.1 chr1 - 1727 1 novel_in_catalog CTBS novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6217.1 chr11 - 1203 10 full-splice_match PSMA1 ENST00000396394.6 1505 10 292 10 no_subtype FALSE canonical NA NA 108 None 4 0 0 FALSE 0 0 NA C coding 263 789 106 894 PB.2116.1 chr3 + 2781 1 genic_intron novelGene_418 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.86.4 chr1 + 3424 3 full-splice_match SZRD1 ENST00000492354.1 3401 3 -23 0 no_subtype FALSE canonical NA NA 319 None 57 20 1 FALSE 0 0 NA C coding 132 396 24 419 PB.8125.1 chr15 - 3666 16 full-splice_match ICE2 ENST00000261520.8 7209 16 31 3512 no_subtype TRUE canonical NA NA 112 None 2 4 0 FALSE 0 0 NA A coding 982 2946 205 3150 PB.7150.2 chr12 - 1693 3 full-splice_match LUM ENST00000266718.4 3008 3 392 923 no_subtype FALSE canonical NA NA 42 None 188 3 0 FALSE 0 0 NA A coding 338 1014 64 1077 PB.7602.3 chr14 - 3178 9 novel_not_in_catalog HNRNPC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 128 None 2 21 1 TRUE 0 0 NA C coding 171 513 592 1104 PB.10824.3 chr22 - 2795 1 genic_intron novelGene_452 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A coding 101 303 605 907 PB.10824.1 chr22 + 2706 13 novel_not_in_catalog ATXN10 novel NA NA NA NA no_subtype TRUE canonical NA NA 1437 None 90 8 0 TRUE 0 0 NA A coding 475 1425 13 1437 PB.4428.1 chr7 + 1807 1 novel_in_catalog ZNF107 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5639.1 chr9 + 2638 12 novel_not_in_catalog NOXA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2470 None 2 20 2 TRUE 0 0 NA B coding 146 438 1302 1739 PB.10343.1 chr20 - 3129 19 full-splice_match TRPC4AP ENST00000451813.6 3138 19 1 8 no_subtype FALSE canonical NA NA 193 None 11 9 1 FALSE 0 0 NA C coding 789 2367 26 2392 PB.10343.2 chr20 - 3004 19 full-splice_match TRPC4AP ENST00000252015.2 3226 19 198 24 no_subtype FALSE canonical NA NA 60 None 107 7 0 FALSE 0 0 NA C coding 691 2073 211 2283 PB.10343.5 chr20 - 3010 18 novel_in_catalog TRPC4AP novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 193 None 2 10 0 FALSE 0 0 NA C coding 750 2250 26 2275 PB.7671.1 chr14 + 3158 8 novel_in_catalog PNN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1548 None 2 40 0 FALSE 0 0 NA C coding 584 1752 1155 2906 PB.7671.2 chr14 + 3258 9 full-splice_match PNN ENST00000216832.8 3576 9 49 269 no_subtype FALSE canonical NA NA 811 None 30 10 0 FALSE 0 0 NA C coding 717 2151 19 2169 PB.7671.3 chr14 + 3021 2 novel_not_in_catalog PNN novel NA NA NA NA no_subtype FALSE canonical NA NA 2986 None 3 24 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.749.2 chr1 - 2964 4 novel_not_in_catalog ISG20L2 novel NA NA NA NA no_subtype FALSE canonical NA NA 335 None 17 13 1 FALSE 0 0 NA B coding 353 1059 453 1511 PB.749.4 chr1 - 2609 4 novel_in_catalog ISG20L2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 327 None 25 7 0 FALSE 0 0 NA B coding 353 1059 484 1542 PB.9390.1 chr17 - 2486 9 full-splice_match ST6GALNAC1 ENST00000156626.11 2570 9 81 3 no_subtype FALSE canonical NA NA 250 None 24 3 0 FALSE 0 0 NA A coding 600 1800 120 1919 PB.749.7 chr1 - 2780 4 novel_not_in_catalog ISG20L2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 116 None 7 15 1 TRUE 0 0 NA B coding 353 1059 271 1329 PB.223.1 chr1 + 6570 14 full-splice_match KPNA6 ENST00000373625.7 7378 14 17 791 no_subtype FALSE canonical NA NA 1499 None 9 20 0 FALSE 0 0 NA C coding 533 1599 86 1684 PB.11194.1 chrX - 1489 12 full-splice_match PNCK ENST00000340888.7 1508 12 13 6 no_subtype FALSE canonical NA NA 53 None 3 2 0 FALSE 0 0 NA A coding 343 1029 56 1084 PB.8981.1 chr17 + 3786 14 novel_not_in_catalog SPECC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3019 None 2 17 1 TRUE 0 0 NA A coding 987 2961 146 3106 PB.223.2 chr1 + 3882 13 novel_in_catalog KPNA6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1420 None 4 8 0 FALSE 0 0 NA C coding 533 1599 7 1605 PB.223.4 chr1 + 2869 1 incomplete-splice_match KPNA6 ENST00000373625.7 7378 14 3557 953 no_subtype FALSE canonical NA NA NA None 7 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1887.1 chr2 + 1281 5 novel_not_in_catalog MRPL44 novel NA NA NA NA no_subtype FALSE canonical NA NA 1073 None 3 5 0 TRUE 0 0 NA C coding 332 996 37 1032 PB.5324.5 chr9 + 2865 12 novel_in_catalog ANXA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2534 None 4 27 0 FALSE 0 0 NA C coding 297 891 75 965 PB.5324.4 chr9 + 2761 11 novel_in_catalog ANXA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2422 None 3 9 0 FALSE 0 0 NA C coding 220 660 1817 2476 PB.10803.1 chr22 - 3371 9 full-splice_match POLDIP3 ENST00000252115.9 3441 9 67 3 no_subtype FALSE canonical NA NA 97 None 7 16 0 FALSE 0 0 NA C coding 421 1263 39 1301 PB.5324.1 chr9 + 1481 13 novel_not_in_catalog ANXA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1142 None 3 1 1 FALSE 0 0 NA C coding 346 1038 159 1196 PB.11201.2 chrX - 5911 16 incomplete-splice_match HCFC1 ENST00000310441.11 8869 26 2947 11 5prime_fragment FALSE canonical NA NA 48 None 2 7 0 FALSE 0 0 NA B coding 1352 4056 70 4125 PB.5324.2 chr9 + 2674 13 full-splice_match ANXA1 ENST00000257497.10 1509 13 108 -1273 no_subtype FALSE canonical NA NA 1058 None 119 10 0 FALSE 0 0 NA C coding 346 1038 75 1112 PB.910.4 chr1 + 2645 17 incomplete-splice_match SMG7 ENST00000347615.6 5788 22 7 3136 3prime_fragment FALSE canonical NA NA 2482 None 2 4 0 FALSE 0 0 NA C coding 844 2532 113 2644 PB.637.2 chr1 - 3424 3 novel_not_in_catalog GJA5 novel NA NA NA NA no_subtype FALSE canonical NA NA 100 None 4 9 0 FALSE 0 0 NA B coding 383 1149 315 1463 PB.8372.1 chr16 + 1289 7 full-splice_match NUBP2 ENST00000262302.13 1413 7 111 13 no_subtype FALSE canonical NA NA 679 None 6 5 0 FALSE 0 0 NA A coding 271 813 10 822 PB.7439.5 chr13 - 3804 29 novel_not_in_catalog SUPT20H novel NA NA NA NA no_subtype FALSE non_canonical NA NA 134 None 2 17 5 TRUE 0 0 NA B coding 534 1602 329 1930 PB.7439.2 chr13 - 2623 25 novel_in_catalog SUPT20H novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 124 None 7 3 0 FALSE 0 0 NA B coding 732 2196 218 2413 PB.7439.3 chr13 - 2745 28 novel_not_in_catalog SUPT20H novel NA NA NA NA no_subtype FALSE non_canonical NA NA 142 None 6 10 4 TRUE 0 0 NA B coding 732 2196 339 2534 PB.910.1 chr1 + 5647 22 full-splice_match SMG7 ENST00000515829.6 5629 22 -19 1 no_subtype FALSE canonical NA NA 3275 None 24 11 0 FALSE 0 0 NA C coding 1091 3273 114 3386 PB.7439.1 chr13 - 3878 28 novel_not_in_catalog SUPT20H novel NA NA NA NA no_subtype TRUE non_canonical NA NA 119 None 2 13 3 TRUE 0 0 NA B coding 535 1605 321 1925 PB.3321.2 chr5 + 2968 24 novel_in_catalog TNPO1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2702 None 2 3 0 FALSE 0 0 NA C coding 890 2670 138 2807 PB.3321.3 chr5 + 3007 25 full-splice_match TNPO1 ENST00000506351.6 3028 25 12 9 no_subtype FALSE canonical NA NA 2773 None 147 2 1 FALSE 0 0 NA C coding 890 2670 66 2735 PB.207.1 chr1 + 2038 5 full-splice_match YTHDF2 ENST00000373812.7 2925 5 233 654 no_subtype FALSE canonical NA NA 1845 None 59 1 0 FALSE 0 0 NA A coding 579 1737 130 1866 PB.3321.1 chr5 + 3046 25 full-splice_match TNPO1 ENST00000337273.9 11183 25 349 7788 no_subtype FALSE canonical NA NA 2809 None 35 1 0 FALSE 0 0 NA C coding 898 2694 78 2771 PB.4713.1 chr7 - 3247 17 novel_not_in_catalog SLC37A3 novel NA NA NA NA no_subtype TRUE canonical NA NA 85 None 19 10 0 TRUE 0 0 NA A coding 494 1482 156 1637 PB.3321.4 chr5 + 2934 24 novel_in_catalog TNPO1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2700 None 3 1 0 FALSE 0 0 NA C coding 858 2574 89 2662 PB.3321.5 chr5 + 2976 24 novel_in_catalog TNPO1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2742 None 2 6 1 FALSE 0 0 NA C coding 861 2583 122 2704 PB.5233.1 chr9 - 6307 17 full-splice_match HAUS6 ENST00000380502.7 6536 17 227 2 no_subtype TRUE canonical NA NA 369 None 2 47 1 FALSE 0 0 NA A coding 911 2733 374 3106 PB.1998.1 chr3 - 2219 3 genic_intron novelGene_70 novel NA NA NA NA no_subtype FALSE canonical NA NA 2110 None 2 15 2 FALSE 0 0 NA A coding 96 288 110 397 PB.3128.1 chr4 + 3825 11 novel_in_catalog GALNT7 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1445 None 2 17 0 FALSE 0 0 NA C coding 434 1302 279 1580 PB.8584.2 chr16 + 3115 4 full-splice_match ZNF267 ENST00000300870.14 3317 4 141 61 no_subtype FALSE canonical NA NA 294 None 24 10 0 FALSE 0 0 NA C coding 743 2229 69 2297 PB.8584.3 chr16 + 2906 4 novel_not_in_catalog ZNF267 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2134 None 2 18 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.5656.1 chr10 + 3265 13 novel_not_in_catalog NET1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1399 None 9 15 0 TRUE 0 0 NA C coding 596 1788 16 1803 PB.6742.1 chr11 - 2676 1 genic RP11-567O18.1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8820.3 chr16 + 3564 13 novel_in_catalog DEF8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1373 None 11 23 0 FALSE 0 0 NA B coding 451 1353 121 1473 PB.8820.2 chr16 + 3470 12 novel_in_catalog DEF8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1279 None 18 20 0 FALSE 0 0 NA B coding 451 1353 27 1379 PB.729.13 chr1 - 2697 11 novel_not_in_catalog YY1AP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 100 None 2 9 2 FALSE 0 0 NA B coding 812 2436 66 2501 PB.1785.1 chr2 - 2707 1 genic_intron novelGene_1374 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9801.1 chr19 + 1712 1 full-splice_match JUNB ENST00000302754.5 1820 1 -10 118 no_subtype FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA C coding 343 1029 299 1327 PB.3650.1 chr5 + 1372 4 full-splice_match ATP6V0E1 ENST00000519374.5 1433 4 50 11 no_subtype FALSE canonical NA NA 336 None 11 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6930.1 chr12 + 1890 3 full-splice_match SLC48A1 ENST00000442218.2 3010 3 33 1087 no_subtype FALSE canonical NA NA 368 None 14 10 0 FALSE 0 0 NA A coding 146 438 65 502 PB.1696.1 chr2 + 1625 11 full-splice_match HAT1 ENST00000264108.4 1626 11 -4 5 no_subtype FALSE canonical NA NA 1132 None 37 1 0 FALSE 0 0 NA A coding 419 1257 41 1297 PB.7762.1 chr14 + 2721 12 full-splice_match FNTB ENST00000246166.2 2834 12 164 -51 no_subtype FALSE canonical NA NA 1252 None 14 6 0 FALSE 0 0 NA A coding 437 1311 71 1381 PB.4564.3 chr7 + 1490 3 novel_in_catalog MUC3A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 275 None 7 9 0 FALSE 0 0 NA C coding 101 303 12 314 PB.1766.6 chr2 - 1441 1 novel_in_catalog STK17B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 17 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.712.4 chr1 - 3033 15 novel_not_in_catalog SHC1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 140 None 75 15 1 TRUE 0 0 NA B coding 474 1422 144 1565 PB.3329.3 chr5 - 1851 2 novel_in_catalog COL4A3BP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 507 None 3 7 0 FALSE 0 0 NA C coding 120 360 412 771 PB.712.6 chr1 - 3091 14 novel_not_in_catalog SHC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 162 None 40 14 0 TRUE 0 0 NA B coding 474 1422 166 1587 PB.3329.1 chr5 - 3133 17 full-splice_match COL4A3BP ENST00000261415.11 2262 17 12 -883 no_subtype FALSE canonical NA NA 506 None 2 10 0 FALSE 0 0 NA C coding 598 1794 411 2204 PB.4221.1 chr6 - 2813 17 full-splice_match SERAC1 ENST00000367104.7 3948 17 79 1056 no_subtype FALSE canonical NA NA 52 None 21 8 1 FALSE 0 0 NA C coding 654 1962 54 2015 PB.2302.14 chr3 - 3138 2 genic_intron novelGene_675 novel NA NA NA NA no_subtype FALSE canonical NA NA 38 None 4 22 1 FALSE 0 0 NA A coding 140 420 582 1001 PB.1200.1 chr2 - 1512 12 full-splice_match FAM49A ENST00000381323.7 4670 12 -19 3177 no_subtype FALSE canonical NA NA 74 None 14 0 0 FALSE 0 0 NA C coding 323 969 241 1209 PB.4006.1 chr6 + 1492 13 novel_not_in_catalog BCKDHB novel NA NA NA NA no_subtype TRUE canonical NA NA 1198 None 17 1 0 TRUE 0 0 NA A coding 392 1176 12 1187 PB.11143.2 chrX + 5946 10 novel_not_in_catalog XIAP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5367 None 2 25 1 TRUE 0 0 NA C coding 535 1605 370 1974 PB.7095.1 chr12 - 1454 1 full-splice_match RBMS1P1 ENST00000417216.3 1156 1 -63 -235 no_subtype FALSE canonical NA NA NA None 14 2 0 FALSE 0 0 NA A coding 404 1212 11 1222 PB.4078.1 chr6 + 1501 10 full-splice_match SMPD2 ENST00000258052.7 1645 10 138 6 no_subtype FALSE canonical NA NA 1104 None 17 1 0 FALSE 0 0 NA A coding 423 1269 222 1490 PB.3753.1 chr6 + 2720 12 incomplete-splice_match JARID2 ENST00000397311.4 5595 18 1898 977 internal_fragment FALSE canonical NA NA 1725 None 2 6 0 FALSE 0 0 NA B coding 605 1815 91 1905 PB.6739.8 chr11 + 3539 18 novel_not_in_catalog APLP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2083 None 2 17 4 TRUE 0 0 NA C coding 551 1653 81 1733 PB.3753.2 chr6 + 2616 11 novel_in_catalog JARID2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1615 None 2 7 0 FALSE 0 0 NA B coding 582 1746 50 1795 PB.580.1 chr1 + 2831 1 antisense novelGene_RSBN1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9277.1 chr17 - 4157 14 novel_not_in_catalog APPBP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 448 None 3 12 1 TRUE 0 0 NA A coding 585 1755 311 2065 PB.2169.2 chr3 - 1465 7 full-splice_match NME6 ENST00000452211.5 1353 7 -32 -80 no_subtype FALSE canonical NA NA 59 None 6 6 0 FALSE 0 0 NA C coding 186 558 271 828 PB.1574.2 chr2 - 1791 15 novel_not_in_catalog BIN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 66 None 9 3 0 TRUE 0 0 NA B coding 415 1245 55 1299 PB.6594.1 chr11 - 2962 5 novel_in_catalog CWC15 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1493 None 2 26 0 FALSE 0 0 NA A coding 120 360 1363 1722 PB.10225.1 chr20 + 2784 9 intergenic novelGene_14 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1680 None 4 18 3 FALSE 0 0 NA B non_coding NA NA NA NA PB.2169.1 chr3 - 2910 8 novel_not_in_catalog NME6 novel NA NA NA NA no_subtype FALSE canonical NA NA 84 None 2 19 0 TRUE 0 0 NA C coding 186 558 296 853 PB.7043.2 chr12 - 2790 7 novel_in_catalog ATP5B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 150 None 7 7 0 FALSE 0 0 NA C coding 258 774 1872 2645 PB.7130.2 chr12 - 5658 23 novel_in_catalog OSBPL8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 343 None 3 21 1 FALSE 0 0 NA B coding 847 2541 500 3040 PB.7130.3 chr12 - 2851 22 incomplete-splice_match OSBPL8 ENST00000393250.8 3157 23 36 270 internal_fragment FALSE canonical NA NA 377 None 2 1 0 FALSE 0 0 NA B coding 775 2325 525 2849 PB.3845.1 chr6 + 1734 7 full-splice_match RING1 ENST00000374656.4 1752 7 7 11 no_subtype FALSE canonical NA NA 1320 None 15 2 0 FALSE 0 0 NA A coding 406 1218 202 1419 PB.8698.1 chr16 + 2625 1 full-splice_match ZFP90 ENST00000571720.2 3901 1 2441 -1165 no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3544.1 chr5 + 4744 5 novel_not_in_catalog PCDHGC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2721 None 7 4 0 TRUE 0 0 NA A coding 934 2802 144 2945 PB.3879.2 chr6 + 3686 8 incomplete-splice_match BRPF3 ENST00000357641.10 6052 13 2359 7 internal_fragment FALSE canonical NA NA 1328 None 3 12 0 FALSE 0 0 NA B coding 448 1344 166 1509 PB.6739.2 chr11 + 3682 17 full-splice_match APLP2 ENST00000338167.9 3270 17 -19 -393 no_subtype FALSE canonical NA NA 2230 None 355 12 0 FALSE 0 0 NA C coding 751 2253 77 2329 PB.3879.1 chr6 + 6370 11 novel_in_catalog BRPF3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4010 None 3 12 0 FALSE 0 0 NA B coding 639 1917 208 2124 PB.7168.1 chr12 - 5537 21 full-splice_match FGD6 ENST00000343958.8 9288 21 17 3734 no_subtype FALSE canonical NA NA 223 None 3 9 0 FALSE 0 0 NA A coding 1430 4290 208 4497 PB.10405.1 chr20 + 5537 12 novel_not_in_catalog STK4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1341 None 16 32 0 TRUE 0 0 NA B coding 487 1461 37 1497 PB.9547.1 chr18 - 874 1 full-splice_match RPL7AP66 ENST00000588490.1 801 1 -18 -55 no_subtype FALSE canonical NA NA NA None 22 1 0 FALSE 0 0 NA A coding 266 798 19 816 PB.10405.4 chr20 + 1519 1 incomplete-splice_match STK4 ENST00000499879.6 6161 10 3734 909 no_subtype FALSE canonical NA NA NA None 6 14 0 FALSE 0 0 NA B coding 117 351 539 889 PB.3556.2 chr5 + 2954 23 novel_not_in_catalog ARHGAP26 novel NA NA NA NA no_subtype FALSE canonical NA NA 2109 None 2 3 0 FALSE 0 0 NA C coding 679 2037 159 2195 PB.5526.9 chr9 - 2895 1 novel_in_catalog SH2D3C novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 11 14 0 FALSE 0 0 NA C coding 104 312 2274 2585 PB.5104.1 chr8 - 1529 9 full-splice_match FBXO32 ENST00000517956.5 6744 9 -28 5243 no_subtype FALSE canonical NA NA 336 None 8 6 0 FALSE 0 0 NA C coding 355 1065 221 1285 PB.3135.1 chr4 + 4529 5 full-splice_match SPCS3 ENST00000503362.1 4571 5 24 18 no_subtype FALSE canonical NA NA 499 None 10 32 0 FALSE 0 0 NA C coding 162 486 144 629 PB.2034.1 chr3 + 2062 4 full-splice_match BTD ENST00000303498.9 2075 4 6 7 no_subtype FALSE canonical NA NA 562 None 7 1 0 FALSE 0 0 NA A coding 523 1569 164 1732 PB.5526.1 chr9 - 3102 12 full-splice_match SH2D3C ENST00000314830.12 3124 12 19 3 no_subtype FALSE canonical NA NA 132 None 90 4 0 FALSE 0 0 NA C coding 860 2580 96 2675 PB.7077.1 chr12 + 2990 1 incomplete-splice_match SRGAP1 ENST00000631006.2 8406 22 5414 3 no_subtype FALSE canonical NA NA NA None 17 20 0 FALSE 0 0 NA B coding 99 297 413 709 PB.7682.2 chr14 - 1549 3 novel_not_in_catalog DNAAF2 novel NA NA NA NA no_subtype TRUE canonical NA NA 697 None 2 7 1 TRUE 0 0 NA B coding 280 840 362 1201 PB.4500.1 chr7 + 3853 20 novel_not_in_catalog AKAP9 novel NA NA NA NA no_subtype FALSE canonical NA NA 3307 None 2 2 0 TRUE 0 0 NA B coding 953 2859 484 3342 PB.5526.5 chr9 - 3545 12 novel_not_in_catalog SH2D3C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 156 None 2 6 0 TRUE 0 0 NA C coding 660 1980 120 2099 PB.11060.1 chrX + 1691 4 full-splice_match SH3BGRL ENST00000373212.5 1923 4 228 4 no_subtype FALSE canonical NA NA 342 None 273 6 0 FALSE 0 0 NA A coding 114 342 31 372 PB.8835.1 chr17 + 2788 17 full-splice_match RPA1 ENST00000254719.9 4340 17 58 1494 no_subtype FALSE canonical NA NA 1798 None 297 8 0 FALSE 0 0 NA A coding 616 1848 53 1900 PB.2900.1 chr4 - 4211 12 full-splice_match CNOT6L ENST00000504123.5 8843 12 -10 4642 no_subtype FALSE canonical NA NA 146 None 3 11 0 FALSE 0 0 NA C coding 550 1650 157 1806 PB.768.4 chr1 + 3059 4 novel_not_in_catalog CD1C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 379 None 2 25 2 TRUE 0 0 NA C coding 200 600 67 666 PB.768.3 chr1 + 3021 4 novel_in_catalog CD1C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 843 None 4 15 1 FALSE 0 0 NA C coding 305 915 234 1148 PB.8018.1 chr15 + 2709 19 novel_in_catalog PLA2G4B novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 2216 None 5 7 0 FALSE 0 0 NA A coding 706 2118 308 2425 PB.768.1 chr1 + 2331 6 full-splice_match CD1C ENST00000368170.7 1435 6 237 -1133 no_subtype FALSE canonical NA NA 1022 None 199 13 1 FALSE 0 0 NA C coding 333 999 43 1041 PB.4074.3 chr6 - 3542 11 novel_not_in_catalog SESN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 736 None 2 9 1 TRUE 0 0 NA C coding 551 1653 790 2442 PB.1539.1 chr2 - 2765 11 novel_not_in_catalog SEPT10 novel NA NA NA NA no_subtype FALSE canonical NA NA 107 None 38 8 1 FALSE 0 0 NA A coding 393 1179 78 1256 PB.11040.1 chrX + 2166 7 full-splice_match UPRT ENST00000373383.8 2186 7 16 4 no_subtype TRUE canonical NA NA 974 None 2 10 0 FALSE 0 0 NA A coding 309 927 152 1078 PB.4074.4 chr6 - 1705 1 novel_in_catalog SESN1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C coding 128 384 61 444 PB.4412.1 chr7 + 1325 3 full-splice_match RAMP3 ENST00000242249.8 1323 3 -5 3 no_subtype FALSE canonical NA NA 234 None 7 3 0 FALSE 0 0 NA A coding 148 444 44 487 PB.9997.1 chr19 + 1913 12 novel_in_catalog PLD3 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 1419 None 15 1 0 FALSE 0 0 NA B coding 490 1470 135 1604 PB.791.7 chr1 - 3218 5 novel_not_in_catalog SLAMF6 novel NA NA NA NA no_subtype FALSE canonical NA NA 119 None 2 9 0 FALSE 0 0 NA C coding 134 402 71 472 PB.1138.2 chr1 + 6806 34 novel_not_in_catalog MTR novel NA NA NA NA no_subtype FALSE canonical NA NA 4907 None 2 27 0 TRUE 0 0 NA B coding 1265 3795 376 4170 PB.9913.1 chr19 + 1652 3 novel_not_in_catalog PLEKHF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1570 None 14 4 1 TRUE 0 0 NA A coding 279 837 59 895 PB.10738.2 chr22 + 3190 6 novel_in_catalog KCTD17 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 631 None 7 11 0 FALSE 0 0 NA C coding 247 741 20 760 PB.10738.1 chr22 + 1684 8 full-splice_match KCTD17 ENST00000402077.7 1691 8 3 4 no_subtype FALSE canonical NA NA 822 None 4 3 0 FALSE 0 0 NA C coding 290 870 20 889 PB.6417.4 chr11 - 6322 41 novel_in_catalog ATG2A novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 245 None 12 0 0 FALSE 0 0 NA B coding 1940 5820 75 5894 PB.566.1 chr1 + 1129 7 full-splice_match ATP5F1 ENST00000369722.7 3156 7 576 1451 no_subtype FALSE canonical NA NA 723 None 24 0 0 FALSE 0 0 NA C coding 256 768 31 798 PB.6417.6 chr11 - 6384 41 novel_not_in_catalog ATG2A novel NA NA NA NA no_subtype FALSE canonical NA NA 244 None 4 10 1 TRUE 0 0 NA B coding 1680 5040 74 5113 PB.6417.1 chr11 - 6245 41 novel_not_in_catalog ATG2A novel NA NA NA NA no_subtype FALSE canonical NA NA 245 None 103 5 1 FALSE 0 0 NA B coding 1932 5796 75 5870 PB.9997.3 chr19 + 1951 12 novel_not_in_catalog PLD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1456 None 3 2 1 FALSE 0 0 NA B coding 490 1470 172 1641 PB.2927.1 chr4 + 3047 14 novel_not_in_catalog CDS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1494 None 6 4 0 TRUE 0 0 NA A coding 461 1383 239 1621 PB.7674.1 chr14 + 3047 3 genic_intron novelGene_393 novel NA NA NA NA no_subtype TRUE canonical NA NA 2875 None 2 22 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4169.1 chr6 + 2946 1 genic_intron novelGene_1213 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7566.2 chr13 - 3369 3 novel_in_catalog ARGLU1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 574 None 4 5 0 FALSE 0 0 NA C coding 273 819 228 1046 PB.8574.1 chr16 - 1832 6 full-splice_match PRSS8 ENST00000317508.10 1872 6 35 5 no_subtype TRUE canonical NA NA 314 None 42 2 1 FALSE 0 0 NA A coding 343 1029 230 1258 PB.7450.3 chr13 - 3137 8 novel_not_in_catalog MRPS31 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1861 None 2 32 3 TRUE 0 0 NA B coding 351 1053 2020 3072 PB.6642.1 chr11 + 3314 14 full-splice_match DLAT ENST00000280346.10 4458 14 627 517 no_subtype FALSE canonical NA NA 1846 None 37 8 0 FALSE 0 0 NA A coding 647 1941 33 1973 PB.8074.1 chr15 + 3073 2 genic NDUFAF4P1 novel NA NA NA NA no_subtype FALSE canonical NA NA 840 None 2 21 1 FALSE 0 0 NA A coding 108 324 433 756 PB.926.6 chr1 - 3973 1 novel_in_catalog IVNS1ABP novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 35 0 FALSE 0 0 NA C coding 197 591 381 971 PB.5476.1 chr9 - 4137 15 full-splice_match PHF19 ENST00000373896.7 4241 15 101 3 no_subtype FALSE canonical NA NA 137 None 8 10 0 FALSE 0 0 NA C coding 580 1740 153 1892 PB.1611.2 chr2 + 5912 3 novel_not_in_catalog HNMT novel NA NA NA NA no_subtype FALSE canonical NA NA 626 None 2 38 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.7070.13 chr12 + 6040 34 full-splice_match MON2 ENST00000393629.6 5612 34 -22 -406 no_subtype TRUE canonical NA NA 5354 None 7 4 0 FALSE 0 0 NA C coding 1711 5133 383 5515 PB.7070.12 chr12 + 3228 8 novel_in_catalog MON2 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 1180 None 2 13 0 FALSE 0 0 NA C coding 339 1017 392 1408 PB.2271.1 chr3 - 1073 10 full-splice_match PDHB ENST00000302746.10 1527 10 23 431 no_subtype FALSE canonical NA NA 62 None 33 0 0 FALSE 0 0 NA A coding 351 1053 21 1073 PB.4529.2 chr7 + 1438 9 novel_not_in_catalog ARPC1A novel NA NA NA NA no_subtype FALSE canonical NA NA 1075 None 2 3 1 FALSE 0 0 NA C coding 182 546 566 1111 PB.7070.14 chr12 + 6151 32 incomplete-splice_match MON2 ENST00000547095.5 5708 36 846 -1289 internal_fragment FALSE canonical NA NA 4582 None 2 6 0 FALSE 0 0 NA C coding 1538 4614 130 4743 PB.7222.1 chr12 + 1825 15 full-splice_match PWP1 ENST00000412830.7 2621 15 88 708 no_subtype TRUE canonical NA NA 1476 None 12 2 0 FALSE 0 0 NA C coding 501 1503 81 1583 PB.7222.2 chr12 + 3202 17 novel_not_in_catalog PWP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2847 None 2 13 1 TRUE 0 0 NA C coding 289 867 2088 2954 PB.4285.1 chr7 + 1191 4 full-splice_match AIMP2 ENST00000223029.7 1225 4 27 7 no_subtype FALSE canonical NA NA 666 None 2 1 0 FALSE 0 0 NA A coding 320 960 93 1052 PB.2174.1 chr3 - 1570 13 full-splice_match UQCRC1 ENST00000203407.5 1985 13 408 7 no_subtype FALSE canonical NA NA 78 None 320 1 0 FALSE 0 0 NA C coding 480 1440 10 1449 PB.2590.2 chr3 - 1637 1 novel_in_catalog PLD1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 6 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3589.4 chr5 - 2936 12 novel_not_in_catalog CCDC69 novel NA NA NA NA no_subtype TRUE canonical NA NA 26 None 158 5 1 TRUE 0 0 NA B coding 149 447 420 866 PB.5495.5 chr9 + 6131 2 novel_in_catalog NEK6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1206 None 2 50 0 FALSE 0 0 NA C coding 141 423 1090 1512 PB.1940.1 chr2 + 1636 8 full-splice_match LRRFIP1 ENST00000289175.10 3709 8 217 1856 no_subtype FALSE canonical NA NA 815 None 43 0 0 FALSE 0 0 NA C coding 514 1542 95 1636 PB.791.5 chr1 - 2607 8 novel_not_in_catalog SLAMF6 novel NA NA NA NA no_subtype FALSE canonical NA NA 119 None 3 9 0 FALSE 0 0 NA C coding 291 873 71 943 PB.1940.2 chr2 + 1772 9 novel_not_in_catalog LRRFIP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 951 None 4 0 0 TRUE 0 0 NA C coding 514 1542 231 1772 PB.9132.1 chr17 + 2588 2 antisense novelGene_STAT5B_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 43 None 6 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6958.1 chr12 - 3740 25 novel_not_in_catalog FMNL3 novel NA NA NA NA no_subtype FALSE canonical NA NA 74 None 2 5 0 FALSE 0 0 NA C coding 932 2796 81 2876 PB.11109.1 chrX - 3843 14 novel_not_in_catalog CHRDL1 novel NA NA NA NA no_subtype TRUE canonical NA NA 74 None 2 15 0 TRUE 0 0 NA A coding 447 1341 127 1467 PB.9434.1 chr17 + 1569 6 full-splice_match CCDC137 ENST00000329214.12 2468 6 390 509 no_subtype FALSE canonical NA NA 673 None 10 5 0 FALSE 0 0 NA A coding 289 867 14 880 PB.8999.2 chr17 - 2524 12 full-splice_match PIGS ENST00000308360.7 2877 12 345 8 no_subtype FALSE canonical NA NA 65 None 30 2 0 FALSE 0 0 NA A coding 555 1665 32 1696 PB.11066.1 chrX - 3900 17 full-splice_match POF1B ENST00000262753.8 3941 17 34 7 no_subtype TRUE canonical NA NA 71 None 22 14 0 FALSE 0 0 NA A coding 589 1767 113 1879 PB.1598.1 chr2 + 3690 2 novel_not_in_catalog MGAT5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1085 None 2 19 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.7437.1 chr13 - 2821 9 full-splice_match SPG20 ENST00000451493.5 4944 9 39 2084 no_subtype FALSE canonical NA NA 177 None 10 10 0 FALSE 0 0 NA C coding 666 1998 180 2177 PB.2405.2 chr3 + 2860 9 full-splice_match NR1I2 ENST00000393716.6 4417 9 1555 2 no_subtype FALSE canonical NA NA 1444 None 3 8 0 FALSE 0 0 NA C coding 379 1137 450 1586 PB.7437.3 chr13 - 2871 9 full-splice_match SPG20 ENST00000438666.6 4789 9 -169 2087 no_subtype FALSE canonical NA NA 228 None 5 5 0 FALSE 0 0 NA C coding 666 1998 231 2228 PB.10710.1 chr22 - 3638 19 full-splice_match EIF4ENIF1 ENST00000330125.9 3544 19 -100 6 no_subtype FALSE canonical NA NA 148 None 12 4 0 FALSE 0 0 NA A coding 985 2955 176 3130 PB.8554.1 chr16 + 1369 8 novel_not_in_catalog SULT1A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 882 None 2 1 0 FALSE 0 0 NA A coding 295 885 108 992 PB.6473.2 chr11 + 3142 21 novel_not_in_catalog GRK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1876 None 2 7 0 FALSE 0 0 NA C coding 659 1977 62 2038 PB.6473.1 chr11 + 3117 21 full-splice_match GRK2 ENST00000308595.9 3466 21 346 3 no_subtype FALSE canonical NA NA 1849 None 7 4 0 FALSE 0 0 NA C coding 647 1941 71 2011 PB.5987.1 chr10 + 3724 13 full-splice_match NOLC1 ENST00000488254.6 2441 13 -15 -1268 no_subtype FALSE canonical NA NA 1966 None 25 17 0 FALSE 0 0 NA A coding 700 2100 23 2122 PB.9311.1 chr17 + 2719 18 novel_not_in_catalog RGS9 novel NA NA NA NA no_subtype FALSE canonical NA NA 1346 None 7 11 1 TRUE 0 0 NA A coding 484 1452 67 1518 PB.7558.1 chr13 + 2460 25 novel_not_in_catalog PCCA novel NA NA NA NA no_subtype TRUE canonical NA NA 2138 None 3 6 1 TRUE 0 0 NA A coding 728 2184 21 2204 PB.6244.1 chr11 - 2967 1 incomplete-splice_match LGR4 ENST00000389858.4 5163 17 2190 7 no_subtype FALSE canonical NA NA NA None 4 7 0 FALSE 0 0 NA A coding 315 945 121 1065 PB.2797.5 chr4 + 3553 1 incomplete-splice_match KLF3 ENST00000261438.9 5122 6 1563 7 no_subtype FALSE canonical NA NA NA None 26 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9186.3 chr17 - 3710 14 incomplete-splice_match KANSL1 ENST00000572904.5 5014 15 1097 207 5prime_fragment FALSE canonical NA NA 365 None 2 13 0 FALSE 0 0 NA A coding 761 2283 109 2391 PB.203.1 chr1 + 2961 13 full-splice_match PHACTR4 ENST00000373836.4 3107 13 -21 167 no_subtype FALSE canonical NA NA 2358 None 2 7 0 FALSE 0 0 NA A coding 712 2136 236 2371 PB.5831.5 chr10 - 3048 7 novel_not_in_catalog C10orf54 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 181 None 6 13 2 TRUE 0 0 NA C coding 235 705 100 804 PB.5941.5 chr10 - 3564 11 novel_not_in_catalog PIK3AP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 69 None 4 17 1 FALSE 0 0 NA B coding 196 588 82 669 PB.8437.1 chr16 + 2848 2 antisense novelGene_LITAF_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 695 None 3 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2797.2 chr4 + 2515 1 genic_intron novelGene_382 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3117.4 chr4 - 2670 1 genic_intron novelGene_1287 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8921.2 chr17 + 5441 4 novel_not_in_catalog NDEL1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5031 None 2 41 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.4147.1 chr6 - 5777 10 novel_not_in_catalog MTFR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 472 None 2 59 3 TRUE 0 0 NA A coding 375 1125 4412 5536 PB.8921.4 chr17 + 2323 9 full-splice_match NDEL1 ENST00000334527.11 2372 9 42 7 no_subtype FALSE canonical NA NA 1099 None 6 2 0 FALSE 0 0 NA C coding 345 1035 156 1190 PB.7778.3 chr14 - 1838 1 incomplete-splice_match ZFP36L1 ENST00000555997.1 3094 2 283 974 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C coding 73 219 718 936 PB.4056.2 chr6 - 2077 2 full-splice_match CD24 ENST00000606017.1 2180 2 90 13 no_subtype FALSE canonical NA NA 88 None 92 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2506.2 chr3 - 1320 11 novel_in_catalog TFDP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 47 None 2 1 0 FALSE 0 0 NA B coding 385 1155 149 1303 PB.4056.1 chr6 - 1699 1 incomplete-splice_match CD24 ENST00000606017.1 2180 2 469 13 no_subtype FALSE canonical NA NA NA None 7 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4148.2 chr6 - 2799 1 novel_in_catalog BCLAF1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5164.2 chr8 + 870 3 full-splice_match EXOSC4 ENST00000316052.5 887 3 15 2 no_subtype FALSE canonical NA NA 466 None 2 0 0 FALSE 0 0 NA C coding 245 735 89 823 PB.623.1 chr1 - 2872 14 full-splice_match PIAS3 ENST00000393045.6 2901 14 25 4 no_subtype FALSE canonical NA NA 89 None 22 4 0 FALSE 0 0 NA C coding 628 1884 66 1949 PB.10098.5 chr19 + 1499 15 full-splice_match RUVBL2 ENST00000595090.5 2009 15 430 80 no_subtype FALSE canonical NA NA 1400 None 56 2 0 FALSE 0 0 NA A coding 463 1389 35 1423 PB.10098.3 chr19 + 1307 5 novel_not_in_catalog FTL novel NA NA NA NA no_subtype FALSE canonical NA NA 644 None 5 5 1 TRUE 0 0 NA C coding 137 411 199 609 PB.10098.1 chr19 + 688 4 full-splice_match FTL ENST00000331825.10 878 4 188 2 no_subtype FALSE canonical NA NA 394 None 261 0 0 FALSE 0 0 NA C coding 175 525 20 544 PB.802.1 chr1 + 2179 13 full-splice_match USP21 ENST00000289865.12 2195 13 6 10 no_subtype FALSE non_canonical NA NA 1822 None 4 1 0 FALSE 0 0 NA A coding 565 1695 216 1910 PB.2506.1 chr3 - 2906 14 novel_not_in_catalog TFDP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 349 None 2 16 0 FALSE 0 0 NA B coding 446 1338 560 1897 PB.5831.6 chr10 - 1502 7 novel_not_in_catalog C10orf54 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 161 None 2 4 1 TRUE 0 0 NA C coding 168 504 80 583 PB.6311.6 chr11 - 1343 12 full-splice_match PSMC3 ENST00000602866.5 1373 12 22 8 no_subtype FALSE canonical NA NA 40 None 34 0 0 FALSE 0 0 NA A coding 423 1269 14 1282 PB.362.1 chr1 - 2857 26 novel_not_in_catalog EPS15 novel NA NA NA NA no_subtype FALSE canonical NA NA 49 None 18 1 0 TRUE 0 0 NA B coding 896 2688 17 2704 PB.623.2 chr1 - 2902 14 novel_in_catalog PIAS3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 118 None 15 6 0 FALSE 0 0 NA C coding 619 1857 122 1978 PB.362.5 chr1 - 3000 2 novel_not_in_catalog EPS15 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 561 None 2 21 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.362.4 chr1 - 4306 26 novel_not_in_catalog EPS15 novel NA NA NA NA no_subtype FALSE canonical NA NA 77 None 4 13 0 TRUE 0 0 NA B coding 933 2799 45 2843 PB.5051.1 chr8 - 3310 9 full-splice_match RRM2B ENST00000251810.7 4931 9 222 1399 no_subtype FALSE canonical NA NA 70 None 5 16 0 FALSE 0 0 NA A coding 351 1053 23 1075 PB.3991.1 chr6 + 2501 12 full-splice_match MTO1 ENST00000498286.5 10857 12 213 8143 no_subtype FALSE canonical NA NA 1981 None 5 2 0 FALSE 0 0 NA A coding 692 2076 65 2140 PB.9258.1 chr17 - 2736 4 full-splice_match SRSF1 ENST00000258962.4 1513 4 122 -1345 no_subtype FALSE canonical NA NA 281 None 334 5 0 FALSE 0 0 NA C coding 248 744 88 831 PB.8078.1 chr15 + 5946 2 genic CTD-2647E9.3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 316 None 2 58 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.8915.1 chr17 - 2757 4 full-splice_match VAMP2 ENST00000481878.1 557 4 -35 -2165 no_subtype FALSE canonical NA NA 106 None 2 14 0 FALSE 0 0 NA C coding 113 339 105 443 PB.8915.2 chr17 - 3197 3 novel_in_catalog VAMP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 67 None 13 20 0 FALSE 0 0 NA C coding 100 300 66 365 PB.8915.3 chr17 - 2114 5 full-splice_match VAMP2 ENST00000316509.10 2153 5 27 12 no_subtype FALSE canonical NA NA 71 None 11 12 0 FALSE 0 0 NA C coding 116 348 70 417 PB.8301.3 chr15 + 3209 21 novel_not_in_catalog UNC45A novel NA NA NA NA no_subtype TRUE canonical NA NA 2576 None 29 2 1 TRUE 0 0 NA B coding 799 2397 435 2831 PB.8258.1 chr15 + 3094 3 novel_not_in_catalog UBE2Q2P2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2590 None 4 17 1 TRUE 0 0 NA A coding 39 117 195 311 PB.7510.3 chr13 + 1473 13 full-splice_match SUGT1 ENST00000310528.8 14131 13 35 12623 no_subtype FALSE canonical NA NA 920 None 4 1 0 FALSE 0 0 NA A coding 333 999 21 1019 PB.5831.7 chr10 - 2048 9 novel_not_in_catalog C10orf54 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 169 None 8 3 1 TRUE 0 0 NA C coding 179 537 609 1145 PB.11213.12 chrX + 3873 7 novel_in_catalog IKBKG novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2808 None 2 13 0 FALSE 0 0 NA C coding 269 807 160 966 PB.11213.10 chrX + 3239 9 novel_not_in_catalog IKBKG novel NA NA NA NA no_subtype FALSE canonical NA NA 2530 None 6 9 0 FALSE 0 0 NA C coding 162 486 2185 2670 PB.11213.11 chrX + 2369 11 novel_not_in_catalog IKBKG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1647 None 2 5 0 FALSE 0 0 NA C coding 216 648 1140 1787 PB.7380.4 chr13 + 3784 5 antisense novelGene_CASC4P1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2411 None 2 26 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.3203.1 chr5 + 1267 10 full-splice_match BRIX1 ENST00000336767.5 1926 10 335 324 no_subtype FALSE canonical NA NA 820 None 3 1 0 FALSE 0 0 NA A coding 353 1059 29 1087 PB.5152.3 chr8 - 6380 9 novel_not_in_catalog EEF1D novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1884 None 2 37 2 TRUE 0 0 NA C coding 281 843 5477 6319 PB.7380.1 chr13 + 1912 4 genic_intron novelGene_182 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1776 None 2 19 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.1127.1 chr1 + 3246 6 antisense novelGene_ARID4B_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2074 None 2 22 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.7380.3 chr13 + 3885 5 antisense novelGene_CASC4P1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3799 None 2 23 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.7380.2 chr13 + 3777 5 antisense novelGene_CASC4P1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2412 None 4 22 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.4134.1 chr6 + 3123 1 genic_intron novelGene_1151 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5885.1 chr10 + 1510 2 novel_not_in_catalog BMPR1A novel NA NA NA NA no_subtype FALSE canonical NA NA 35 None 6 17 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.4509.1 chr7 - 2301 10 novel_not_in_catalog CDK6 novel NA NA NA NA no_subtype FALSE canonical NA NA 88 None 2 10 0 TRUE 0 0 NA A coding 326 978 456 1433 PB.8644.4 chr16 + 3572 14 novel_in_catalog ADGRG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1999 None 6 8 0 FALSE 0 0 NA C coding 687 2061 67 2127 PB.9305.2 chr17 - 2867 1 full-splice_match DDX5 ENST00000579212.1 100 1 -1183 -1584 no_subtype FALSE canonical NA NA NA None 15 19 0 FALSE 0 0 NA C coding 126 378 2194 2571 PB.9305.1 chr17 - 2160 13 full-splice_match DDX5 ENST00000225792.9 2554 13 384 10 no_subtype FALSE canonical NA NA 62 None 18 1 0 FALSE 0 0 NA C coding 614 1842 19 1860 PB.6232.1 chr11 + 2850 15 full-splice_match GTF2H1 ENST00000265963.8 2982 15 -19 151 no_subtype FALSE canonical NA NA 1739 None 58 6 0 FALSE 0 0 NA A coding 548 1644 180 1823 PB.9305.4 chr17 - 2090 12 novel_in_catalog DDX5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 214 None 2 3 0 FALSE 0 0 NA C coding 539 1617 171 1787 PB.885.1 chr1 - 1560 1 genic_intron novelGene_1336 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1920.1 chr2 + 2709 6 full-splice_match EIF4E2 ENST00000409495.5 1014 6 -14 -1681 no_subtype FALSE canonical NA NA 578 None 11 4 0 FALSE 0 0 NA C coding 233 699 51 749 PB.1552.1 chr2 - 1531 7 full-splice_match IL1B ENST00000263341.6 1631 7 88 12 no_subtype TRUE canonical NA NA 108 None 3 8 0 FALSE 0 0 NA A coding 269 807 124 930 PB.1794.3 chr2 - 1697 12 full-splice_match CLK1 ENST00000432425.5 1682 12 -20 5 no_subtype FALSE canonical NA NA 113 None 8 1 0 FALSE 0 0 NA C coding 258 774 701 1474 PB.6626.1 chr11 - 2918 8 full-splice_match SLC35F2 ENST00000525815.5 3170 8 239 13 no_subtype FALSE canonical NA NA 292 None 69 13 0 FALSE 0 0 NA C coding 374 1122 183 1304 PB.7187.1 chr12 - 3646 15 incomplete-splice_match UHRF1BP1L ENST00000279907.11 5168 21 -17 1539 internal_fragment FALSE canonical NA NA 274 None 13 2 0 FALSE 0 0 NA B coding 1138 3414 231 3644 PB.5153.2 chr8 - 1292 11 full-splice_match TSTA3 ENST00000425753.6 1362 11 68 2 no_subtype FALSE canonical NA NA 25 None 14 5 1 FALSE 0 0 NA C coding 321 963 37 999 PB.9639.1 chr19 + 769 7 full-splice_match GPX4 ENST00000611653.4 793 7 22 2 no_subtype FALSE canonical NA NA 531 None 34 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.791.8 chr1 - 5422 1 novel_in_catalog SLAMF6 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA C coding 117 351 4263 4613 PB.8644.3 chr16 + 3643 14 full-splice_match ADGRG1 ENST00000568909.5 4254 14 53 558 no_subtype FALSE canonical NA NA 2072 None 3 9 1 FALSE 0 0 NA C coding 693 2079 122 2200 PB.5068.1 chr8 - 3530 12 novel_not_in_catalog NUDCD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 195 None 5 13 1 TRUE 0 0 NA B coding 583 1749 78 1826 PB.688.1 chr1 - 988 4 novel_not_in_catalog S100A16 novel NA NA NA NA no_subtype FALSE canonical NA NA 37 None 2 3 1 TRUE 0 0 NA A coding 103 309 64 372 PB.11226.1 chrY + 873 7 full-splice_match RPS4Y1 ENST00000250784.12 1305 7 116 316 no_subtype FALSE canonical NA NA 713 None 21 1 0 FALSE 0 0 NA A coding 263 789 24 812 PB.2145.1 chr3 + 1952 2 full-splice_match CXCR6 ENST00000304552.4 1962 2 5 5 no_subtype FALSE canonical NA NA 64 None 7 5 0 FALSE 0 0 NA A coding 342 1026 86 1111 PB.4231.1 chr6 - 1609 10 full-splice_match TAGAP ENST00000367066.7 3887 10 161 2117 no_subtype FALSE canonical NA NA 113 None 77 0 0 FALSE 0 0 NA C coding 479 1437 172 1608 PB.10847.1 chr22 - 1953 8 full-splice_match ARSA ENST00000216124.9 2050 8 85 12 no_subtype FALSE canonical NA NA 532 None 5 1 0 FALSE 0 0 NA A coding 509 1527 309 1835 PB.7165.2 chr12 - 2902 1 genic_intron novelGene_861 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6207.1 chr11 + 5607 28 full-splice_match USP47 ENST00000527733.5 4525 28 10 -1092 no_subtype FALSE canonical NA NA 4094 None 13 16 0 FALSE 0 0 NA C coding 1355 4065 202 4266 PB.10019.22 chr19 + 2079 16 novel_in_catalog ARHGEF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1740 None 3 1 0 FALSE 0 0 NA C coding 571 1713 8 1720 PB.10019.21 chr19 + 2656 17 novel_in_catalog ARHGEF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2312 None 3 8 0 FALSE 0 0 NA C coding 684 2052 241 2292 PB.10019.24 chr19 + 2942 12 novel_not_in_catalog ARHGEF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1435 None 2 10 0 FALSE 0 0 NA C coding 453 1359 223 1581 PB.3100.1 chr4 + 2739 1 antisense novelGene_RNF175_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 25 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6207.3 chr11 + 2752 2 genic_intron novelGene_97 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1269 None 5 12 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.7273.10 chr12 + 2765 1 incomplete-splice_match OAS3 ENST00000228928.11 6719 16 3947 8 no_subtype FALSE canonical NA NA NA None 6 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5211.1 chr9 + 1423 9 full-splice_match RCL1 ENST00000381750.8 2134 9 75 636 no_subtype TRUE canonical NA NA 1119 None 7 3 0 FALSE 0 0 NA A coding 373 1119 149 1267 PB.2604.1 chr3 + 2735 19 novel_not_in_catalog MFN1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2221 None 4 2 0 TRUE 0 0 NA A coding 741 2223 75 2297 PB.1763.3 chr2 - 2692 2 antisense novelGene_NABP1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 37 None 3 27 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.461.1 chr1 + 2917 14 full-splice_match CLCA1 ENST00000394711.1 3118 14 167 34 no_subtype FALSE canonical NA NA 2315 None 194 5 0 FALSE 0 0 NA A coding 859 2577 128 2704 PB.2681.1 chr3 - 3773 23 incomplete-splice_match MUC4 ENST00000346145.8 3982 24 166 43 5prime_fragment TRUE canonical NA NA 109 None 2 15 1 FALSE 0 0 NA A coding 1114 3342 61 3402 PB.5831.2 chr10 - 3050 7 novel_not_in_catalog C10orf54 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 161 None 2 11 1 TRUE 0 0 NA C coding 235 705 80 784 PB.8280.3 chr15 + 5828 6 novel_in_catalog ABHD2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 752 None 2 33 0 FALSE 0 0 NA C coding 241 723 215 937 PB.8229.1 chr15 + 1653 16 novel_not_in_catalog PSTPIP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1367 None 4 2 0 TRUE 0 0 NA C coding 415 1245 252 1496 PB.4151.1 chr6 + 1445 10 full-splice_match PEX7 ENST00000318471.4 1464 10 13 6 no_subtype FALSE canonical NA NA 971 None 2 4 0 FALSE 0 0 NA A coding 323 969 69 1037 PB.8585.1 chr16 + 1522 1 intergenic novelGene_311 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1699.4 chr2 + 5657 26 novel_not_in_catalog ITGA6 novel NA NA NA NA no_subtype FALSE canonical NA NA 5065 None 2 42 3 TRUE 0 0 NA B coding 1091 3273 200 3472 PB.1078.1 chr1 - 3481 1 incomplete-splice_match ENAH ENST00000366844.7 13168 15 4415 5273 no_subtype FALSE canonical NA NA NA None 5 32 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10607.1 chr21 + 3448 28 full-splice_match COL6A2 ENST00000300527.8 3461 28 10 3 no_subtype FALSE canonical NA NA 2555 None 45 3 0 FALSE 0 0 NA C coding 1019 3057 95 3151 PB.10607.2 chr21 + 3384 27 novel_in_catalog COL6A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2491 None 23 2 0 FALSE 0 0 NA C coding 1019 3057 31 3087 PB.10607.3 chr21 + 3093 27 full-splice_match COL6A2 ENST00000397763.5 3101 27 -3 11 no_subtype FALSE canonical NA NA 2491 None 3 2 0 FALSE 0 0 NA C coding 918 2754 31 2784 PB.11115.1 chrX + 3092 16 full-splice_match PLS3 ENST00000355899.7 3280 16 -6 194 no_subtype FALSE canonical NA NA 1853 None 74 1 0 FALSE 0 0 NA A coding 627 1881 103 1983 PB.9371.2 chr17 + 2479 11 full-splice_match SAP30BP ENST00000584667.5 2722 11 241 2 no_subtype FALSE canonical NA NA 761 None 2 13 0 FALSE 0 0 NA C coding 308 924 17 940 PB.9371.1 chr17 + 3590 12 novel_not_in_catalog SAP30BP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1264 None 5 25 1 TRUE 0 0 NA C coding 308 924 27 950 PB.8900.1 chr17 + 1981 2 full-splice_match TMEM102 ENST00000396568.1 1962 2 -23 4 no_subtype FALSE canonical NA NA 655 None 2 5 0 FALSE 0 0 NA A coding 508 1524 442 1965 PB.6580.1 chr11 - 3139 1 genic_intron novelGene_784 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7264.1 chr12 - 3613 4 novel_not_in_catalog MAPKAPK5-AS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 631 None 2 15 0 TRUE 0 0 NA B coding 218 654 887 1540 PB.7740.1 chr14 - 1244 7 full-splice_match DHRS7 ENST00000557185.5 1322 7 74 4 no_subtype FALSE canonical NA NA 179 None 25 2 0 FALSE 0 0 NA C coding 339 1017 47 1063 PB.7740.2 chr14 - 1516 7 novel_not_in_catalog DHRS7 novel NA NA NA NA no_subtype FALSE canonical NA NA 450 None 3 5 0 FALSE 0 0 NA C coding 289 867 468 1334 PB.8960.1 chr17 + 2909 4 novel_not_in_catalog MIEF2 novel NA NA NA NA no_subtype TRUE canonical NA NA 224 None 3 8 0 TRUE 0 0 NA A coding 172 516 1385 1900 PB.3597.1 chr5 - 2932 15 novel_not_in_catalog FAM114A2 novel NA NA NA NA no_subtype TRUE canonical NA NA 199 None 16 8 1 TRUE 0 0 NA B coding 505 1515 214 1728 PB.4058.7 chr6 - 1776 10 novel_not_in_catalog SCML4 novel NA NA NA NA no_subtype TRUE canonical NA NA 185 None 2 3 0 TRUE 0 0 NA C coding 336 1008 245 1252 PB.1031.2 chr1 + 2991 12 full-splice_match RCOR3 ENST00000419091.6 2041 12 -39 -911 no_subtype FALSE canonical NA NA 1484 None 2 7 0 FALSE 0 0 NA C coding 549 1647 180 1826 PB.6401.1 chr11 + 990 7 full-splice_match OTUB1 ENST00000538426.5 1729 7 25 714 no_subtype FALSE canonical NA NA 637 None 41 1 0 FALSE 0 0 NA A coding 271 813 20 832 PB.7443.1 chr13 + 3011 8 novel_not_in_catalog NHLRC3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2499 None 15 12 0 TRUE 0 0 NA C coding 347 1041 185 1225 PB.10258.1 chr20 + 2562 13 full-splice_match CDS2 ENST00000460006.5 9298 13 195 6541 no_subtype FALSE canonical NA NA 1317 None 3 6 0 FALSE 0 0 NA C coding 445 1335 113 1447 PB.905.7 chr1 + 2782 13 novel_not_in_catalog NPL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2659 None 2 15 1 TRUE 0 0 NA B coding 302 906 141 1046 PB.7443.2 chr13 + 3402 7 full-splice_match NHLRC3 ENST00000379600.7 3549 7 138 9 no_subtype FALSE canonical NA NA 975 None 15 15 0 FALSE 0 0 NA C coding 347 1041 185 1225 PB.7523.1 chr13 - 3239 1 genic_intron novelGene_693 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1031.4 chr1 + 2960 1 novel_in_catalog RCOR3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 22 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9236.1 chr17 - 3992 6 novel_not_in_catalog ANKRD40 novel NA NA NA NA no_subtype TRUE canonical NA NA 258 None 11 13 1 TRUE 0 0 NA A coding 368 1104 125 1228 PB.3512.11 chr5 + 3785 15 full-splice_match MATR3 ENST00000618441.4 5282 15 218 1279 no_subtype FALSE canonical NA NA 2731 None 3 5 0 FALSE 0 0 NA C coding 847 2541 239 2779 PB.2352.1 chr3 - 1678 1 incomplete-splice_match CBLB ENST00000394030.6 4475 7 2788 10 no_subtype FALSE canonical NA NA NA None 7 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6534.1 chr11 + 1628 3 genic CTD-2562J17.7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1377 None 2 8 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.7544.4 chr13 + 5536 15 novel_not_in_catalog DNAJC3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5338 None 4 49 1 TRUE 0 0 NA B coding 504 1512 109 1620 PB.2336.1 chr3 - 4060 12 full-splice_match TOMM70 ENST00000284320.5 4409 12 313 36 no_subtype FALSE canonical NA NA 460 None 10 12 0 FALSE 0 0 NA A coding 608 1824 137 1960 PB.1070.3 chr1 + 2952 22 novel_not_in_catalog CAPN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1952 None 4 5 0 TRUE 0 0 NA B coding 375 1125 849 1973 PB.501.1 chr1 + 2180 18 novel_not_in_catalog SLC44A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1945 None 2 6 0 TRUE 0 0 NA A coding 653 1959 89 2047 PB.3011.1 chr4 - 2871 1 novel_in_catalog CAMK2D novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5132.4 chr8 - 2822 6 novel_in_catalog SLA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 78 None 3 12 0 FALSE 0 0 NA B coding 178 534 119 652 PB.3453.1 chr5 + 1953 5 full-splice_match ISOC1 ENST00000173527.5 1940 5 0 -13 no_subtype FALSE canonical NA NA 766 None 14 8 0 FALSE 0 0 NA A coding 298 894 17 910 PB.5418.1 chr9 + 3681 11 novel_not_in_catalog SLC44A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1317 None 2 5 0 FALSE 0 0 NA A coding 431 1293 46 1338 PB.568.1 chr1 + 1601 1 incomplete-splice_match RAP1A ENST00000369709.3 5024 8 3418 6 no_subtype FALSE canonical NA NA NA None 11 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8220.1 chr15 + 3891 2 full-splice_match SNX33 ENST00000308527.5 8008 2 444 3673 no_subtype FALSE canonical NA NA 2224 None 3 10 0 FALSE 0 0 NA A coding 574 1722 754 2475 PB.5583.1 chr9 - 2100 7 full-splice_match UCK1 ENST00000372215.4 2167 7 62 5 no_subtype FALSE canonical NA NA 140 None 5 16 0 FALSE 0 0 NA A coding 277 831 33 863 PB.3911.1 chr6 - 2655 9 novel_in_catalog TFEB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 584 None 3 6 0 FALSE 0 0 NA A coding 476 1428 607 2034 PB.9740.2 chr19 + 4202 7 full-splice_match ZNF317 ENST00000591278.5 4186 7 -30 14 no_subtype FALSE canonical NA NA 914 None 2 25 0 FALSE 0 0 NA C coding 440 1320 912 2231 PB.9740.1 chr19 + 4016 7 full-splice_match ZNF317 ENST00000247956.10 4073 7 49 8 no_subtype FALSE canonical NA NA 724 None 47 11 0 FALSE 0 0 NA C coding 595 1785 257 2041 PB.6371.1 chr11 + 3086 12 full-splice_match FADS2 ENST00000278840.8 3630 12 541 3 no_subtype FALSE canonical NA NA 1372 None 54 9 0 FALSE 0 0 NA A coding 444 1332 90 1421 PB.1411.4 chr2 + 6478 28 full-splice_match ZNF638 ENST00000264447.8 6505 28 18 9 no_subtype FALSE canonical NA NA 6167 None 12 7 1 FALSE 0 0 NA C coding 1978 5934 297 6230 PB.1411.5 chr2 + 3559 20 novel_in_catalog ZNF638 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 3431 None 2 1 0 FALSE 0 0 NA C coding 1087 3261 297 3557 PB.1340.7 chr2 - 3149 16 novel_not_in_catalog MTIF2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 892 None 2 8 1 TRUE 0 0 NA B coding 727 2181 945 3125 PB.5989.2 chr10 + 2964 23 full-splice_match NFKB2 ENST00000428099.5 3416 23 444 8 no_subtype TRUE canonical NA NA 2697 None 10 0 0 FALSE 0 0 NA C coding 899 2697 120 2816 PB.5989.4 chr10 + 3041 22 novel_in_catalog NFKB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2768 None 17 0 0 FALSE 0 0 NA C coding 899 2697 191 2887 PB.11200.1 chrX - 1357 11 novel_not_in_catalog RENBP novel NA NA NA NA no_subtype FALSE canonical NA NA 86 None 8 1 0 FALSE 0 0 NA A coding 417 1251 90 1340 PB.1340.6 chr2 - 2718 16 novel_not_in_catalog MTIF2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 400 None 2 5 1 TRUE 0 0 NA B coding 727 2181 514 2694 PB.10250.6 chr20 - 3094 1 genic_intron novelGene_33 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA A coding 69 207 142 348 PB.5132.1 chr8 - 1841 8 incomplete-splice_match SLA ENST00000338087.9 3451 9 679 931 5prime_fragment FALSE canonical NA NA 101 None 54 5 0 FALSE 0 0 NA B coding 276 828 142 969 PB.5438.1 chr9 - 3387 2 novel_not_in_catalog PTGR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1225 None 2 23 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.10250.1 chr20 - 3569 2 genic RNF24 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3478 None 2 35 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.10250.2 chr20 - 5839 1 incomplete-splice_match RNF24 ENST00000336095.10 7453 6 1598 17 no_subtype FALSE canonical NA NA NA None 2 62 0 FALSE 0 0 NA C coding 139 417 5227 5643 PB.10250.3 chr20 - 1565 6 full-splice_match RNF24 ENST00000358395.10 3242 6 2 1675 no_subtype FALSE canonical NA NA 144 None 75 5 0 FALSE 0 0 NA C coding 148 444 152 595 PB.4654.2 chr7 - 1674 1 incomplete-splice_match UBE2H ENST00000355621.7 5151 7 1413 2065 no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4654.3 chr7 - 2817 8 novel_not_in_catalog UBE2H novel NA NA NA NA no_subtype FALSE canonical NA NA 73 None 2 21 2 TRUE 0 0 NA B coding 113 339 718 1056 PB.4912.1 chr8 - 3010 14 novel_in_catalog PRKDC novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 539 None 2 10 0 FALSE 0 0 NA B coding 477 1431 759 2189 PB.2435.1 chr3 - 1991 1 novel_in_catalog HACD2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3785.40 chr6 - 1108 1 genic_intron novelGene_242 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10891.7 chrX - 1857 3 genic_intron novelGene_184 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 996 None 2 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1657.3 chr2 + 3508 10 novel_not_in_catalog MARCH7 novel NA NA NA NA no_subtype FALSE canonical NA NA 2220 None 6 13 1 FALSE 0 0 NA B coding 704 2112 165 2276 PB.3109.1 chr4 + 3013 13 full-splice_match TMEM144 ENST00000296529.10 3442 13 216 213 no_subtype FALSE canonical NA NA 1258 None 2 12 0 FALSE 0 0 NA A coding 345 1035 305 1339 PB.4434.2 chr7 + 4469 4 novel_not_in_catalog VKORC1L1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3441 None 5 27 0 TRUE 0 0 NA C coding 176 528 25 552 PB.9693.1 chr19 + 2779 10 novel_in_catalog KDM4B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1145 None 2 18 0 FALSE 0 0 NA A coding 372 1116 228 1343 PB.6365.1 chr11 - 3449 10 full-splice_match CPSF7 ENST00000439958.7 3524 10 73 2 no_subtype FALSE canonical NA NA 28 None 29 9 1 FALSE 0 0 NA C coding 462 1386 84 1469 PB.6365.3 chr11 - 3536 10 full-splice_match CPSF7 ENST00000394888.8 3650 10 37 77 no_subtype FALSE canonical NA NA 81 None 9 10 1 FALSE 0 0 NA C coding 471 1413 137 1549 PB.6365.2 chr11 - 3578 10 novel_not_in_catalog CPSF7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 61 None 5 9 0 TRUE 0 0 NA C coding 468 1404 117 1520 PB.9063.1 chr17 - 3742 3 antisense novelGene_SLFN5_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1693 None 3 25 2 FALSE 0 0 NA A coding 101 303 2 304 PB.1340.1 chr2 - 2705 15 novel_not_in_catalog MTIF2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 409 None 3 7 1 TRUE 0 0 NA B coding 727 2181 497 2677 PB.4058.2 chr6 - 3270 3 genic RP1-47M23.3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 751 None 3 12 1 FALSE 0 0 NA B coding 125 375 400 774 PB.1759.1 chr2 - 2587 24 full-splice_match STAT4 ENST00000392320.6 2822 24 230 5 no_subtype TRUE canonical NA NA 84 None 4 1 0 FALSE 0 0 NA C coding 748 2244 86 2329 PB.1759.2 chr2 - 1629 3 novel_in_catalog STAT4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 90 None 3 5 0 FALSE 0 0 NA C coding 104 312 92 403 PB.9212.1 chr17 - 1341 2 full-splice_match HOXB13 ENST00000290295.7 3467 2 449 1677 no_subtype FALSE canonical NA NA 737 None 47 2 0 FALSE 0 0 NA A coding 284 852 137 988 PB.716.5 chr1 + 2795 22 novel_not_in_catalog ADAM15 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2481 None 6 4 2 TRUE 0 0 NA B coding 499 1497 1025 2521 PB.2097.5 chr3 + 2748 21 novel_not_in_catalog VILL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2510 None 5 3 0 TRUE 0 0 NA B coding 847 2541 81 2621 PB.103.1 chr1 - 1142 1 full-splice_match RNF186 ENST00000375121.3 1250 1 100 8 no_subtype FALSE canonical NA NA NA None 3 2 0 FALSE 0 0 NA A coding 227 681 78 758 PB.3021.2 chr4 - 3735 2 antisense novelGene_SYNPO2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 337 None 6 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2097.1 chr3 + 3002 22 novel_not_in_catalog VILL novel NA NA NA NA no_subtype FALSE canonical NA NA 2764 None 3 13 1 TRUE 0 0 NA B coding 856 2568 308 2875 PB.11186.3 chrX + 3431 16 novel_not_in_catalog MTM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1727 None 16 4 1 FALSE 0 0 NA B coding 377 1131 77 1207 PB.2097.3 chr3 + 2929 21 novel_not_in_catalog VILL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2691 None 2 9 1 TRUE 0 0 NA B coding 856 2568 235 2802 PB.2097.2 chr3 + 2809 21 novel_not_in_catalog VILL novel NA NA NA NA no_subtype FALSE canonical NA NA 2580 None 77 2 1 TRUE 0 0 NA B coding 856 2568 124 2691 PB.921.1 chr1 - 3180 8 novel_not_in_catalog FAM129A novel NA NA NA NA no_subtype FALSE canonical NA NA 158 None 3 17 0 TRUE 0 0 NA B coding 264 792 104 895 PB.3577.1 chr5 - 5709 24 novel_not_in_catalog PDGFRB novel NA NA NA NA no_subtype TRUE canonical NA NA 491 None 30 13 0 TRUE 0 0 NA A coding 1100 3300 516 3815 PB.11186.2 chrX + 3431 17 novel_not_in_catalog MTM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1727 None 3 3 1 TRUE 0 0 NA B coding 377 1131 77 1207 PB.1448.1 chr2 + 2714 3 novel_not_in_catalog VAMP5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2257 None 2 14 0 TRUE 0 0 NA A coding 123 369 198 566 PB.8256.1 chr15 - 3620 20 full-splice_match EFL1 ENST00000268206.11 3675 20 47 8 no_subtype FALSE canonical NA NA 103 None 41 1 0 FALSE 0 0 NA C coding 1120 3360 123 3482 PB.8256.2 chr15 - 3647 21 novel_not_in_catalog EFL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 67 None 2 10 0 FALSE 0 0 NA C coding 566 1698 1803 3500 PB.8256.3 chr15 - 2832 1 genic_intron novelGene_759 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.540.1 chr1 - 3633 1 incomplete-splice_match SORT1 ENST00000538502.5 6993 20 3342 19 no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8675.1 chr16 + 4031 24 novel_not_in_catalog FAM65A novel NA NA NA NA no_subtype TRUE canonical NA NA 3628 None 17 6 1 TRUE 0 0 NA B coding 500 1500 2224 3723 PB.4345.4 chr7 + 6940 3 novel_not_in_catalog CREB5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5167 None 2 31 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.8675.3 chr16 + 2752 12 novel_not_in_catalog AC027682.1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2363 None 2 9 2 TRUE 0 0 NA A coding 500 1500 959 2458 PB.9183.9 chr17 - 2849 1 full-splice_match ARHGAP27 ENST00000579357.1 2853 1 -3 7 no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA C coding 105 315 803 1117 PB.4345.1 chr7 + 1615 3 full-splice_match CREB5 ENST00000468391.5 643 3 -8 -964 no_subtype FALSE canonical NA NA 196 None 6 2 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4345.3 chr7 + 3300 7 full-splice_match CREB5 ENST00000396298.6 2001 7 156 -1455 no_subtype FALSE canonical NA NA 960 None 5 8 0 FALSE 0 0 NA C coding 369 1107 15 1121 PB.3526.2 chr5 + 2680 16 incomplete-splice_match ANKHD1 ENST00000421134.5 4814 27 -21 2155 3prime_fragment FALSE canonical NA NA 2441 None 2 2 0 FALSE 0 0 NA B coding 847 2541 140 2680 PB.5373.1 chr9 + 2861 1 novel_in_catalog FGD3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 16 0 FALSE 0 0 NA C coding 119 357 1613 1969 PB.8609.1 chr16 + 1800 1 full-splice_match PHBP21 ENST00000562636.1 823 1 -38 -939 no_subtype FALSE canonical NA NA NA None 7 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4228.3 chr6 - 2170 14 full-splice_match EZR ENST00000367075.3 3096 14 42 884 no_subtype FALSE canonical NA NA 54 None 791 4 0 FALSE 0 0 NA C coding 575 1725 161 1885 PB.3526.1 chr5 + 4554 26 incomplete-splice_match ANKHD1 ENST00000421134.5 4814 27 -26 286 3prime_fragment FALSE canonical NA NA 4518 None 2 2 0 FALSE 0 0 NA B coding 1470 4410 145 4554 PB.1436.1 chr2 + 1893 5 full-splice_match DOK1 ENST00000233668.9 2555 5 652 10 no_subtype FALSE canonical NA NA 656 None 12 3 0 FALSE 0 0 NA C coding 481 1443 18 1460 PB.3892.5 chr6 - 1866 12 novel_not_in_catalog MTCH1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 295 None 8 3 1 TRUE 0 0 NA C coding 313 939 167 1105 PB.3892.3 chr6 - 1826 12 full-splice_match MTCH1 ENST00000373616.9 2006 12 175 5 no_subtype FALSE canonical NA NA 271 None 51 10 1 FALSE 0 0 NA C coding 308 924 143 1066 PB.3892.2 chr6 - 1902 12 full-splice_match MTCH1 ENST00000373627.9 2057 12 151 4 no_subtype FALSE canonical NA NA 295 None 11 4 0 FALSE 0 0 NA C coding 325 975 167 1141 PB.8095.2 chr15 - 2901 3 genic_intron novelGene_524 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 391 None 2 27 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.1965.2 chr2 + 2888 16 novel_not_in_catalog ATG4B novel NA NA NA NA no_subtype TRUE canonical NA NA 1231 None 2 21 1 TRUE 0 0 NA B coding 319 957 346 1302 PB.3564.1 chr5 + 4110 22 full-splice_match FBXO38 ENST00000340253.9 4424 22 38 276 no_subtype FALSE canonical NA NA 3518 None 4 5 0 FALSE 0 0 NA C coding 1188 3564 131 3694 PB.7959.33 chr14 - 1488 6 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 85 None 2 17 2 TRUE 0 0 NA B coding 288 864 40 903 PB.3564.3 chr5 + 3877 22 full-splice_match FBXO38 ENST00000394370.7 4132 22 -24 279 no_subtype FALSE canonical NA NA 3288 None 7 1 0 FALSE 0 0 NA C coding 1113 3339 126 3464 PB.6090.1 chr10 - 3001 1 novel_in_catalog LINC00959 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 17 0 FALSE 0 0 NA A coding 109 327 1047 1373 PB.7273.7 chr12 + 6074 15 novel_not_in_catalog OAS3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2793 None 3 22 1 TRUE 0 0 NA B coding 755 2265 538 2802 PB.10593.1 chr21 + 3137 21 full-splice_match PWP2 ENST00000291576.11 3297 21 75 85 no_subtype FALSE canonical NA NA 2637 None 38 2 0 FALSE 0 0 NA A coding 919 2757 53 2809 PB.7747.8 chr14 + 2722 2 genic_intron novelGene_590 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2696 None 3 21 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3424.2 chr5 - 3206 9 full-splice_match PGGT1B ENST00000419445.5 9545 9 16 6323 no_subtype FALSE canonical NA NA 145 None 4 17 1 FALSE 0 0 NA C coding 377 1131 6 1136 PB.2826.3 chr4 - 1284 1 genic ATP8A1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2826.2 chr4 - 1638 1 genic_intron novelGene_424 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11038.2 chrX - 2870 4 full-splice_match RLIM ENST00000332687.10 8317 4 -7 5454 no_subtype FALSE canonical NA NA 203 None 4 6 1 FALSE 0 0 NA C coding 624 1872 227 2098 PB.2727.1 chr4 - 1648 11 full-splice_match STX18 ENST00000306200.6 2138 11 -20 510 no_subtype FALSE canonical NA NA 252 None 14 8 0 FALSE 0 0 NA A coding 335 1005 85 1089 PB.10232.1 chr20 - 1074 7 full-splice_match SNRPB ENST00000381342.6 1154 7 63 17 no_subtype FALSE canonical NA NA 103 None 4 2 0 FALSE 0 0 NA A coding 231 693 101 793 PB.7959.187 chr14 - 1584 12 fusion IGHV3-62,IGHG1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 124 None 2 10 4 TRUE 0 0 NA A coding 196 588 862 1449 PB.11007.1 chrX + 3570 2 novel_not_in_catalog MIR223 novel NA NA NA NA no_subtype FALSE canonical NA NA 63 None 6 16 0 FALSE 0 0 NA A coding 156 468 1789 2256 PB.3099.1 chr4 + 2868 1 genic_intron novelGene_1254 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4377.1 chr7 - 3516 1 genic_intron novelGene_371 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10987.1 chrX - 1326 8 incomplete-splice_match HUWE1 ENST00000426907.5 4805 18 2376 1103 5prime_fragment FALSE canonical NA NA 87 None 2 1 0 FALSE 0 0 NA A coding 358 1074 140 1213 PB.921.4 chr1 - 2259 15 novel_not_in_catalog FAM129A novel NA NA NA NA no_subtype FALSE canonical NA NA 125 None 149 2 0 TRUE 0 0 NA B coding 729 2187 71 2257 PB.6853.1 chr12 + 926 4 novel_not_in_catalog MGST1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 319 None 2 2 0 FALSE 0 0 NA A coding 155 465 99 563 PB.1801.3 chr2 + 3928 1 novel_in_catalog STRADB novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8812.1 chr16 + 1051 6 full-splice_match RPL13 ENST00000311528.9 4498 6 26 3421 no_subtype FALSE canonical NA NA 527 None 45 6 0 FALSE 0 0 NA A coding 211 633 51 683 PB.1066.1 chr1 + 3091 1 novel_in_catalog DISP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA A coding 170 510 909 1418 PB.1549.1 chr2 + 3973 16 novel_not_in_catalog POLR1B novel NA NA NA NA no_subtype FALSE canonical NA NA 3695 None 79 9 2 TRUE 0 0 NA B coding 1135 3405 28 3432 PB.575.4 chr1 + 3261 20 full-splice_match MOV10 ENST00000357443.2 3383 20 142 -20 no_subtype FALSE canonical NA NA 2946 None 20 0 0 FALSE 0 0 NA C coding 1003 3009 27 3035 PB.9038.3 chr17 - 1762 2 genic CTD-2370N5.3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 35 None 43 10 1 TRUE 0 0 NA A coding 448 1344 52 1395 PB.6506.8 chr11 - 7291 25 novel_in_catalog NUMA1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 293 None 2 11 1 FALSE 0 0 NA B coding 2101 6303 326 6628 PB.4359.1 chr7 - 2922 1 antisense novelGene_AVL9_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10096.1 chr19 - 1573 11 full-splice_match BCAT2 ENST00000316273.10 1552 11 -27 6 no_subtype TRUE canonical NA NA 64 None 29 2 0 FALSE 0 0 NA A coding 392 1176 41 1216 PB.3614.1 chr5 - 6299 2 genic_intron novelGene_1264 novel NA NA NA NA no_subtype FALSE canonical NA NA 3477 None 3 35 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1921.2 chr2 + 2614 22 novel_not_in_catalog GIGYF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2541 None 2 0 0 TRUE 0 0 NA B coding 814 2442 172 2613 PB.9247.1 chr17 + 2817 1 antisense novelGene_TRIM25_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 16 0 FALSE 0 0 NA A coding 100 300 1729 2028 PB.5640.1 chr9 - 2068 12 novel_not_in_catalog ENTPD8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 42 None 3 7 2 TRUE 0 0 NA A coding 495 1485 63 1547 PB.3465.1 chr5 + 1565 1 novel_in_catalog C5orf56 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5502.1 chr9 + 1309 4 full-splice_match ARPC5L ENST00000259477.6 1325 4 31 -15 no_subtype FALSE canonical NA NA 454 None 4 4 0 FALSE 0 0 NA C coding 153 459 56 514 PB.4926.1 chr8 + 1555 1 genic RP11-318K15.2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA A coding 39 117 330 446 PB.6944.1 chr12 - 3569 5 full-splice_match ARF3 ENST00000256682.8 4105 5 48 488 no_subtype FALSE canonical NA NA 194 None 29 16 0 FALSE 0 0 NA C coding 181 543 288 830 PB.9631.2 chr19 - 3458 16 novel_not_in_catalog MED16 novel NA NA NA NA no_subtype TRUE canonical NA NA 122 None 5 13 0 TRUE 0 0 NA C coding 800 2400 141 2540 PB.10583.1 chr21 + 1509 4 full-splice_match NDUFV3 ENST00000354250.6 1575 4 59 7 no_subtype FALSE canonical NA NA 1274 None 7 1 0 FALSE 0 0 NA A coding 473 1419 11 1429 PB.5892.1 chr10 - 3037 1 antisense novelGene_PTEN_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.926.5 chr1 - 2858 8 novel_in_catalog IVNS1ABP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 320 None 2 21 0 FALSE 0 0 NA C coding 221 663 567 1229 PB.6827.2 chr12 - 1156 6 novel_not_in_catalog KLRC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 206 None 2 7 0 FALSE 0 0 NA A coding 133 399 20 418 PB.10579.1 chr21 + 2345 14 full-splice_match UBASH3A ENST00000291535.11 2005 14 73 -413 no_subtype FALSE canonical NA NA 1745 None 2 0 0 FALSE 0 0 NA C coding 623 1869 12 1880 PB.10579.2 chr21 + 2515 15 novel_not_in_catalog UBASH3A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1992 None 3 1 1 TRUE 0 0 NA C coding 450 1350 778 2127 PB.926.4 chr1 - 4102 14 novel_in_catalog IVNS1ABP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 291 None 6 5 0 FALSE 0 0 NA C coding 302 906 2928 3833 PB.263.11 chr1 - 2935 2 genic STK40 novel NA NA NA NA no_subtype FALSE canonical NA NA 266 None 2 19 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.2864.1 chr4 - 1283 4 full-splice_match JCHAIN ENST00000543780.5 1406 4 123 0 no_subtype FALSE canonical NA NA 82 None 120 6 0 FALSE 0 0 NA C coding 159 477 19 495 PB.10204.1 chr19 + 4286 5 novel_not_in_catalog ZSCAN22 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2745 None 4 22 0 TRUE 0 0 NA A coding 491 1473 141 1613 PB.9631.1 chr19 - 3129 15 full-splice_match MED16 ENST00000395808.7 3420 15 31 260 no_subtype TRUE canonical NA NA 102 None 2 10 2 FALSE 0 0 NA C coding 841 2523 121 2643 PB.7368.3 chr12 + 3235 18 full-splice_match SFSWAP ENST00000261674.8 3246 18 8 3 no_subtype FALSE canonical NA NA 2923 None 3 4 0 FALSE 0 0 NA C coding 951 2853 134 2986 PB.3258.1 chr5 - 1459 6 full-splice_match PLPP1 ENST00000307259.8 1597 6 86 52 no_subtype FALSE canonical NA NA 393 None 14 3 0 FALSE 0 0 NA C coding 284 852 336 1187 PB.4601.1 chr7 + 3972 6 full-splice_match CBLL1 ENST00000440859.7 4432 6 458 2 no_subtype FALSE canonical NA NA 449 None 8 14 0 FALSE 0 0 NA A coding 491 1473 10 1482 PB.3318.3 chr5 + 2858 11 novel_not_in_catalog PTCD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1207 None 2 12 0 TRUE 0 0 NA C coding 383 1149 13 1161 PB.5460.30 chr9 - 3299 1 genic AKNA novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5895.1 chr10 + 2717 10 novel_not_in_catalog LIPN novel NA NA NA NA no_subtype FALSE canonical NA NA 1105 None 2 12 0 TRUE 0 0 NA A coding 397 1191 146 1336 PB.7959.37 chr14 - 1458 8 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 3 19 5 TRUE 0 0 NA B coding 466 1398 11 1408 PB.10519.1 chr21 - 1886 15 full-splice_match CCT8 ENST00000286788.8 2005 15 112 7 no_subtype FALSE canonical NA NA 155 None 76 2 0 FALSE 0 0 NA A coding 548 1644 96 1739 PB.1570.1 chr2 - 3428 16 novel_not_in_catalog TFCP2L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 152 None 7 13 0 TRUE 0 0 NA B coding 479 1437 91 1527 PB.3443.1 chr5 + 2709 14 full-splice_match GRAMD3 ENST00000285689.7 3175 14 239 227 no_subtype FALSE canonical NA NA 1479 None 2 5 0 FALSE 0 0 NA A coding 432 1296 223 1518 PB.10364.2 chr20 - 2786 18 novel_not_in_catalog SAMHD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 380 None 2 5 1 TRUE 0 0 NA B coding 242 726 1314 2039 PB.10364.3 chr20 - 2170 16 novel_not_in_catalog SAMHD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 273 None 195 2 1 TRUE 0 0 NA B coding 265 795 1138 1932 PB.7959.151 chr14 - 1531 11 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 84 None 3 15 6 TRUE 0 0 NA B coding 196 588 808 1395 PB.7959.150 chr14 - 1584 11 fusion IGHV3-62,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 125 None 2 28 5 TRUE 0 0 NA B coding 196 588 861 1448 PB.4270.2 chr7 + 2022 1 novel_in_catalog CHST12 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA B coding 414 1242 83 1324 PB.7959.152 chr14 - 1579 11 fusion IGHV3-53,IGHG1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 125 None 5 9 4 TRUE 0 0 NA A coding 196 588 856 1443 PB.7959.155 chr14 - 1523 9 fusion IGHV3-23,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 125 None 2 6 5 TRUE 0 0 NA B coding 196 588 800 1387 PB.7716.1 chr14 - 3107 1 genic_intron novelGene_535 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.157 chr14 - 1561 12 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 88 None 3 16 6 TRUE 0 0 NA B coding 196 588 838 1425 PB.7959.156 chr14 - 1517 8 fusion IGHG1,IGHV3-7,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 87 None 2 22 4 TRUE 0 0 NA B coding 196 588 794 1381 PB.7959.159 chr14 - 1529 13 fusion IGHV1-24,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 104 None 2 18 9 TRUE 0 0 NA B coding 196 588 806 1393 PB.7959.158 chr14 - 1546 13 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 83 None 2 11 4 TRUE 0 0 NA B coding 196 588 823 1410 PB.2030.3 chr3 - 2021 9 novel_not_in_catalog SH3BP5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 312 None 2 23 1 TRUE 0 0 NA C coding 450 1350 175 1524 PB.2087.2 chr3 - 5520 32 novel_not_in_catalog CLASP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 134 None 4 6 0 TRUE 0 0 NA B coding 1259 3777 119 3895 PB.2087.3 chr3 - 5567 37 novel_not_in_catalog CLASP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 426 None 3 4 1 TRUE 0 0 NA B coding 1491 4473 232 4704 PB.2087.1 chr3 - 6352 38 novel_not_in_catalog CLASP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 439 None 4 8 1 TRUE 0 0 NA B coding 1492 4476 245 4720 PB.8179.2 chr15 + 2192 14 full-splice_match PIAS1 ENST00000249636.10 8115 14 139 5784 no_subtype FALSE canonical NA NA 1671 None 28 2 0 FALSE 0 0 NA C coding 651 1953 10 1962 PB.135.1 chr1 + 2674 11 full-splice_match TCEB3 ENST00000609199.1 2671 11 -1 -2 no_subtype FALSE canonical NA NA 2290 None 11 4 0 FALSE 0 0 NA A coding 772 2316 34 2349 PB.5628.1 chr9 + 3109 16 novel_not_in_catalog RABL6 novel NA NA NA NA no_subtype FALSE canonical NA NA 2250 None 24 11 0 TRUE 0 0 NA A coding 729 2187 262 2448 PB.9661.1 chr19 + 2470 15 novel_not_in_catalog THOP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2429 None 3 12 3 TRUE 0 0 NA C coding 689 2067 127 2193 PB.2719.1 chr4 - 1739 13 full-splice_match MFSD10 ENST00000355443.8 1753 13 13 1 no_subtype FALSE canonical NA NA 78 None 31 6 1 FALSE 0 0 NA A coding 455 1365 100 1464 PB.9661.3 chr19 + 2954 12 novel_in_catalog THOP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2472 None 4 5 0 FALSE 0 0 NA C coding 441 1323 131 1453 PB.9661.2 chr19 + 2520 13 full-splice_match THOP1 ENST00000307741.10 4804 13 62 2222 no_subtype FALSE canonical NA NA 2049 None 9 4 0 FALSE 0 0 NA C coding 689 2067 142 2208 PB.1688.1 chr2 + 2877 2 antisense novelGene_TLK1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 621 None 2 21 1 FALSE 0 0 NA B coding 101 303 1460 1762 PB.9661.4 chr19 + 2915 12 novel_in_catalog THOP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2444 None 2 6 0 FALSE 0 0 NA C coding 330 990 436 1425 PB.7360.1 chr12 + 4201 7 novel_not_in_catalog ZNF664 novel NA NA NA NA no_subtype TRUE canonical NA NA 323 None 4 18 0 TRUE 0 0 NA A coding 261 783 923 1705 PB.7531.3 chr13 - 3504 5 full-splice_match FBXL3 ENST00000355619.9 3503 5 -9 8 no_subtype FALSE canonical NA NA 333 None 5 17 0 FALSE 0 0 NA C coding 428 1284 335 1618 PB.7531.2 chr13 - 3941 1 full-splice_match KCTD12 ENST00000377474.3 6225 1 2253 31 no_subtype FALSE canonical NA NA NA None 37 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8455.1 chr16 - 1798 11 novel_not_in_catalog NTAN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 138 None 2 11 1 TRUE 0 0 NA A coding 120 360 58 417 PB.8712.1 chr16 - 3681 1 antisense novelGene_RP11-311C24.1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1044.1 chr1 + 2608 1 antisense novelGene_ANGEL2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A coding 124 372 593 964 PB.7531.5 chr13 - 3151 4 novel_in_catalog FBXL3 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 333 None 4 22 0 FALSE 0 0 NA C coding 276 828 442 1269 PB.228.1 chr1 + 2105 13 full-splice_match LCK ENST00000336890.9 2117 13 7 5 no_subtype FALSE canonical NA NA 1458 None 55 2 0 FALSE 0 0 NA C coding 509 1527 132 1658 PB.9720.1 chr19 - 1468 2 antisense novelGene_MCOLN1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 22 None 2 7 0 FALSE 0 0 NA A coding 102 306 201 506 PB.6713.2 chr11 + 1487 1 novel_in_catalog TBRG1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 7 7 0 FALSE 0 0 NA C coding 123 369 215 583 PB.6713.3 chr11 + 1487 8 full-splice_match TBRG1 ENST00000284290.8 4468 8 17 2964 no_subtype FALSE canonical NA NA 1145 None 15 2 0 FALSE 0 0 NA C coding 187 561 728 1288 PB.6713.1 chr11 + 1634 9 full-splice_match TBRG1 ENST00000441174.7 4004 9 1 2369 no_subtype FALSE canonical NA NA 1293 None 11 2 0 FALSE 0 0 NA C coding 411 1233 204 1436 PB.5345.2 chr9 - 2096 17 full-splice_match HNRNPK ENST00000376281.8 2928 17 -1 833 no_subtype FALSE canonical NA NA 103 None 345 3 0 FALSE 0 0 NA C coding 464 1392 211 1602 PB.5345.3 chr9 - 2910 17 novel_not_in_catalog HNRNPK novel NA NA NA NA no_subtype FALSE canonical NA NA 98 None 2 15 1 TRUE 0 0 NA C coding 377 1131 206 1336 PB.5345.1 chr9 - 2019 17 novel_in_catalog HNRNPK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 90 None 199 7 0 FALSE 0 0 NA C coding 463 1389 198 1586 PB.5345.6 chr9 - 2833 17 novel_not_in_catalog HNRNPK novel NA NA NA NA no_subtype FALSE canonical NA NA 31 None 2 15 2 TRUE 0 0 NA C coding 223 669 845 1513 PB.5345.4 chr9 - 2100 17 novel_not_in_catalog HNRNPK novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 12 6 0 FALSE 0 0 NA C coding 464 1392 211 1602 PB.5345.5 chr9 - 2821 17 novel_not_in_catalog HNRNPK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 42 None 2 13 2 TRUE 0 0 NA C coding 223 669 829 1497 PB.8179.5 chr15 + 1681 8 novel_not_in_catalog PIAS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 943 None 2 5 0 FALSE 0 0 NA C coding 322 966 10 975 PB.5803.11 chr10 - 1808 1 genic_intron novelGene_605 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3187.1 chr5 - 4261 18 novel_not_in_catalog MYO10 novel NA NA NA NA no_subtype FALSE canonical NA NA 129 None 2 19 0 TRUE 0 0 NA B coding 875 2625 247 2871 PB.9393.1 chr17 + 1913 1 genic METTL23 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10065.1 chr19 - 4032 27 novel_not_in_catalog SYMPK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 92 None 19 3 0 FALSE 0 0 NA A coding 1274 3822 112 3933 PB.5620.1 chr9 - 1692 10 full-splice_match UBAC1 ENST00000371756.3 1867 10 162 13 no_subtype FALSE canonical NA NA 194 None 9 4 0 FALSE 0 0 NA A coding 405 1215 57 1271 PB.1332.1 chr2 + 1269 3 full-splice_match CHAC2 ENST00000295304.4 1321 3 32 20 no_subtype FALSE canonical NA NA 234 None 2 4 0 FALSE 0 0 NA A coding 184 552 64 615 PB.810.1 chr1 + 1722 1 genic_intron novelGene_1281 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2342.1 chr3 + 3729 3 antisense novelGene_ABI3BP_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2804 None 3 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1096.1 chr1 + 1844 5 full-splice_match ARF1 ENST00000272102.9 1888 5 40 4 no_subtype FALSE canonical NA NA 487 None 344 2 0 FALSE 0 0 NA C coding 181 543 104 646 PB.9736.1 chr19 + 2323 17 full-splice_match HNRNPM ENST00000348943.7 2568 17 239 6 no_subtype FALSE canonical NA NA 1905 None 10 1 0 FALSE 0 0 NA C coding 674 2022 45 2066 PB.9736.2 chr19 + 2459 16 full-splice_match HNRNPM ENST00000325495.8 2494 16 28 7 no_subtype FALSE canonical NA NA 2042 None 35 0 0 FALSE 0 0 NA C coding 730 2190 14 2203 PB.1096.2 chr1 + 1858 5 full-splice_match ARF1 ENST00000540651.5 1972 5 109 5 no_subtype FALSE canonical NA NA 503 None 2 3 0 FALSE 0 0 NA C coding 181 543 120 662 PB.6812.1 chr12 - 1439 7 full-splice_match M6PR ENST00000000412.7 2756 7 237 1080 no_subtype FALSE canonical NA NA 231 None 24 4 0 FALSE 0 0 NA C coding 277 831 233 1063 PB.1664.2 chr2 + 1572 8 full-splice_match TANK ENST00000392749.6 2171 8 131 468 no_subtype FALSE canonical NA NA 1209 None 11 2 0 FALSE 0 0 NA C coding 425 1275 109 1383 PB.6812.3 chr12 - 3086 8 novel_not_in_catalog M6PR novel NA NA NA NA no_subtype FALSE canonical NA NA 183 None 6 16 1 TRUE 0 0 NA C coding 345 1035 611 1645 PB.220.2 chr1 - 1887 7 novel_not_in_catalog PTP4A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 88 None 2 4 0 TRUE 0 0 NA B coding 167 501 771 1271 PB.220.3 chr1 - 1866 7 novel_in_catalog PTP4A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 85 None 5 4 0 FALSE 0 0 NA B coding 167 501 752 1252 PB.3342.1 chr5 + 5871 12 novel_not_in_catalog SCAMP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 5245 None 2 37 1 TRUE 0 0 NA C coding 338 1014 121 1134 PB.220.1 chr1 - 1589 5 novel_not_in_catalog PTP4A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 76 None 2 9 0 TRUE 0 0 NA B coding 47 141 248 388 PB.11037.1 chrX - 1706 2 genic_intron novelGene_699 novel NA NA NA NA no_subtype FALSE canonical NA NA 1029 None 2 5 0 FALSE 0 0 NA A coding 15 45 261 305 PB.6684.2 chr11 - 2626 9 novel_not_in_catalog SLC37A4 novel NA NA NA NA no_subtype FALSE canonical NA NA 590 None 5 11 0 FALSE 0 0 NA B coding 228 684 1390 2073 PB.1725.1 chr2 + 1735 2 genic_intron novelGene_1340 novel NA NA NA NA no_subtype FALSE canonical NA NA 209 None 3 9 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4710.1 chr7 - 2987 1 incomplete-splice_match KDM7A ENST00000472616.1 7943 13 4955 2 no_subtype FALSE canonical NA NA NA None 5 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9532.3 chr18 - 3259 4 full-splice_match ZNF24 ENST00000399061.3 6282 4 18 3005 no_subtype FALSE canonical NA NA 69 None 17 21 0 FALSE 0 0 NA C coding 368 1104 153 1256 PB.9532.1 chr18 - 2427 1 incomplete-splice_match ZNF24 ENST00000399061.3 6282 4 3850 6 no_subtype FALSE canonical NA NA NA None 5 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6897.2 chr12 + 6053 7 novel_not_in_catalog KIAA1551 novel NA NA NA NA no_subtype FALSE canonical NA NA 5451 None 24 14 2 TRUE 0 0 NA B coding 1154 3462 377 3838 PB.9319.1 chr17 + 3096 16 novel_not_in_catalog NOL11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2640 None 3 8 0 FALSE 0 0 NA C coding 410 1230 568 1797 PB.5616.1 chr9 + 1475 4 novel_not_in_catalog MRPS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 347 None 42 2 0 FALSE 0 0 NA A coding 258 774 163 936 PB.3197.2 chr5 + 2486 19 full-splice_match TARS ENST00000265112.7 4314 19 220 1608 no_subtype FALSE canonical NA NA 2114 None 2 1 0 FALSE 0 0 NA C coding 723 2169 92 2260 PB.3197.1 chr5 + 2629 20 novel_not_in_catalog TARS novel NA NA NA NA no_subtype FALSE canonical NA NA 2506 None 38 5 1 TRUE 0 0 NA C coding 723 2169 92 2260 PB.2908.1 chr4 - 2949 3 genic_intron novelGene_760 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1435 None 5 29 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.10164.6 chr19 - 2111 9 fusion LILRA6,LILRB3 novel NA NA NA NA no_subtype TRUE canonical NA NA 114 None 2 7 1 TRUE 0 0 NA B coding 512 1536 81 1616 PB.4176.3 chr6 - 3224 7 novel_in_catalog PLAGL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 171 None 2 9 0 FALSE 0 0 NA C coding 463 1389 714 2102 PB.1559.3 chr2 - 1822 2 genic_intron novelGene_1012 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 64 None 2 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10164.3 chr19 - 2098 8 full-splice_match MBOAT7 ENST00000245615.5 2529 8 432 -1 no_subtype FALSE canonical NA NA 46 None 3 3 0 FALSE 0 0 NA A coding 472 1416 50 1465 PB.5230.1 chr9 - 2233 1 incomplete-splice_match BNC2 ENST00000380672.8 12844 7 5172 5440 no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10164.1 chr19 - 2369 18 fusion LILRA6,LILRB3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 129 None 2 4 1 TRUE 0 0 NA B coding 596 1788 96 1883 PB.4883.8 chr8 + 2556 1 incomplete-splice_match TACC1 ENST00000519093.5 6447 5 3888 4 no_subtype FALSE canonical NA NA NA None 6 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7608.26 chr14 + 1443 7 fusion TRAV20,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 900 None 2 5 1 TRUE 0 0 NA B coding 145 435 73 507 PB.7608.25 chr14 + 1466 6 fusion TRAV20,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 920 None 2 6 1 FALSE 0 0 NA B coding 131 393 135 527 PB.7608.24 chr14 + 1457 7 fusion TRAV17,TRAC novel NA NA NA NA no_subtype TRUE non_canonical NA NA 911 None 2 12 1 TRUE 0 0 NA A coding 119 357 102 458 PB.7608.23 chr14 + 1570 7 fusion TRAC,TRAV8-6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1024 None 5 6 1 TRUE 0 0 NA B coding 128 384 206 589 PB.7608.22 chr14 + 1568 9 fusion TRAC,TRAV8-6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1027 None 3 8 2 TRUE 0 0 NA B coding 137 411 224 634 PB.7608.21 chr14 + 1601 10 fusion TRAC,TRAV8-6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1055 None 2 8 4 TRUE 0 0 NA B coding 266 798 254 1051 PB.4883.1 chr8 + 2906 14 novel_not_in_catalog TACC1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2745 None 3 3 0 FALSE 0 0 NA B coding 805 2415 397 2811 PB.4883.3 chr8 + 2785 14 novel_not_in_catalog TACC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2629 None 6 2 0 FALSE 0 0 NA B coding 775 2325 371 2695 PB.4883.5 chr8 + 2494 14 novel_not_in_catalog TACC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2331 None 2 6 1 FALSE 0 0 NA B coding 776 2328 70 2397 PB.10686.3 chr22 + 2336 17 full-splice_match EWSR1 ENST00000397938.6 2654 17 309 9 no_subtype FALSE canonical NA NA 1941 None 38 9 1 FALSE 0 0 NA C coding 656 1968 11 1978 PB.10686.2 chr22 + 1741 7 novel_in_catalog EWSR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 629 None 2 10 0 FALSE 0 0 NA C coding 273 819 49 867 PB.28.3 chr1 - 1412 11 novel_not_in_catalog ACOT7 novel NA NA NA NA no_subtype FALSE canonical NA NA 121 None 2 0 0 TRUE 0 0 NA B coding 338 1014 75 1088 PB.28.2 chr1 - 1444 12 novel_not_in_catalog ACOT7 novel NA NA NA NA no_subtype FALSE canonical NA NA 153 None 4 1 0 TRUE 0 0 NA B coding 370 1110 11 1120 PB.28.1 chr1 - 1458 12 novel_not_in_catalog ACOT7 novel NA NA NA NA no_subtype FALSE canonical NA NA 167 None 5 1 0 TRUE 0 0 NA B coding 329 987 148 1134 PB.1433.5 chr2 - 1632 11 full-splice_match AUP1 ENST00000463900.5 1645 11 9 4 no_subtype FALSE canonical NA NA 109 None 4 6 0 FALSE 0 0 NA C coding 281 843 643 1485 PB.1433.2 chr2 - 1463 12 full-splice_match AUP1 ENST00000377526.3 1695 12 220 12 no_subtype FALSE canonical NA NA 140 None 74 2 0 FALSE 0 0 NA C coding 410 1230 91 1320 PB.7302.1 chr12 - 1567 6 full-splice_match RAB35 ENST00000229340.9 2945 6 86 1292 no_subtype FALSE canonical NA NA 155 None 64 2 0 FALSE 0 0 NA A coding 201 603 104 706 PB.6353.1 chr11 + 1844 4 full-splice_match CCDC86 ENST00000227520.9 1893 4 47 2 no_subtype FALSE canonical NA NA 970 None 3 5 0 FALSE 0 0 NA A coding 360 1080 8 1087 PB.3459.1 chr5 - 3287 1 genic RAPGEF6 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3314.1 chr5 + 3661 17 full-splice_match MCCC2 ENST00000340941.10 3665 17 1 3 no_subtype FALSE canonical NA NA 1702 None 8 11 0 FALSE 0 0 NA A coding 563 1689 129 1817 PB.3459.4 chr5 - 5552 25 novel_not_in_catalog RAPGEF6 novel NA NA NA NA no_subtype FALSE canonical NA NA 246 None 2 19 3 TRUE 0 0 NA B coding 1265 3795 178 3972 PB.3459.7 chr5 - 2834 1 genic_intron novelGene_1135 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3398.1 chr5 - 2501 5 full-splice_match ST8SIA4 ENST00000231461.9 6303 5 -7 3809 no_subtype FALSE canonical NA NA 431 None 39 8 0 FALSE 0 0 NA C coding 359 1077 319 1395 PB.1474.4 chr2 - 922 5 novel_not_in_catalog IGKV1-27 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 70 None 66 10 1 TRUE 0 0 NA B coding 146 438 16 453 PB.6703.13 chr11 + 5828 45 novel_not_in_catalog SORL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 5639 None 29 0 0 TRUE 0 0 NA B coding 1880 5640 65 5704 PB.6315.8 chr11 - 3797 17 novel_not_in_catalog CELF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 21 None 3 9 0 TRUE 0 0 NA B coding 513 1539 358 1896 PB.6703.19 chr11 + 1800 1 genic_intron novelGene_1059 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6703.18 chr11 + 1645 3 novel_not_in_catalog SORL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1117 None 8 13 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.4225.2 chr6 + 3140 1 incomplete-splice_match TMEM181 ENST00000367090.3 5390 17 2219 32 no_subtype FALSE canonical NA NA NA None 2 38 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5814.1 chr10 + 3543 20 novel_not_in_catalog HK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2659 None 264 1 0 TRUE 0 0 NA A coding 917 2751 51 2801 PB.2967.1 chr4 + 3287 12 novel_not_in_catalog METAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3168 None 4 10 1 TRUE 0 0 NA C coding 386 1158 28 1185 PB.2515.1 chr3 - 3218 1 genic_intron novelGene_1219 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 29 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6951.1 chr12 + 2704 14 full-splice_match SPATS2 ENST00000552918.5 2993 14 -10 299 no_subtype FALSE canonical NA NA 1720 None 17 6 0 FALSE 0 0 NA A coding 545 1635 395 2029 PB.5909.1 chr10 + 1848 7 novel_in_catalog PCGF5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 746 None 2 6 0 FALSE 0 0 NA C coding 193 579 273 851 PB.7654.1 chr14 - 2076 5 full-splice_match EGLN3 ENST00000250457.7 2709 5 5 628 no_subtype FALSE canonical NA NA 681 None 2 10 0 FALSE 0 0 NA A coding 239 717 325 1041 PB.5909.3 chr10 + 1614 5 novel_in_catalog PCGF5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 502 None 2 15 0 FALSE 0 0 NA C coding 127 381 238 618 PB.10505.1 chr21 + 2643 2 genic_intron novelGene_137 novel NA NA NA NA no_subtype FALSE canonical NA NA 957 None 2 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.842.4 chr1 + 3911 7 novel_not_in_catalog RCSD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2276 None 13 21 3 TRUE 0 0 NA C coding 86 258 104 361 PB.5264.1 chr9 - 4287 30 novel_not_in_catalog UBAP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 63 None 9 9 0 TRUE 0 0 NA A coding 1124 3372 108 3479 PB.4225.1 chr6 + 2923 4 antisense novelGene_DYNLT1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 284 None 2 27 3 FALSE 0 0 NA A coding 165 495 2270 2764 PB.2007.2 chr3 - 5536 16 novel_not_in_catalog RAF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 295 None 2 26 0 TRUE 0 0 NA B coding 555 1665 322 1986 PB.842.1 chr1 + 2891 7 full-splice_match RCSD1 ENST00000367854.7 3135 7 233 11 no_subtype FALSE canonical NA NA 1316 None 144 7 0 FALSE 0 0 NA C coding 416 1248 99 1346 PB.842.2 chr1 + 5409 5 novel_not_in_catalog RCSD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3775 None 4 24 2 TRUE 0 0 NA C coding 83 249 179 427 PB.2007.1 chr3 - 3088 19 novel_not_in_catalog RAF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 305 None 116 3 0 TRUE 0 0 NA B coding 648 1944 332 2275 PB.842.8 chr1 + 2685 2 novel_not_in_catalog RCSD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1014 None 8 14 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.8357.1 chr16 + 1503 2 genic_intron novelGene_12 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 280 None 3 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2007.9 chr3 - 5472 17 novel_not_in_catalog RAF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 384 None 2 31 0 TRUE 0 0 NA B coding 555 1665 411 2075 PB.3043.1 chr4 + 1545 6 full-splice_match C4orf33 ENST00000425929.5 1588 6 36 7 no_subtype FALSE canonical NA NA 550 None 2 6 0 FALSE 0 0 NA A coding 199 597 57 653 PB.6750.3 chr11 - 2793 7 novel_not_in_catalog THYN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2226 None 3 24 1 TRUE 0 0 NA C coding 167 501 2179 2679 PB.6709.1 chr11 - 2773 1 incomplete-splice_match CLMP ENST00000448775.3 5072 7 2290 10 no_subtype FALSE canonical NA NA NA None 4 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.242.1 chr1 - 1357 1 antisense novelGene_ZNF362_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 2 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4084.1 chr6 + 3418 9 full-splice_match AMD1 ENST00000368885.7 3438 9 15 5 no_subtype FALSE canonical NA NA 1185 None 38 13 0 FALSE 0 0 NA A coding 334 1002 322 1323 PB.6750.2 chr11 - 2829 6 novel_in_catalog THYN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2221 None 3 23 0 FALSE 0 0 NA C coding 167 501 2174 2674 PB.3541.1 chr5 + 3953 1 full-splice_match PCDHB15 ENST00000231173.5 4017 1 56 8 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A coding 787 2361 175 2535 PB.6428.3 chr11 - 3052 16 novel_not_in_catalog SYVN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 64 None 2 5 1 FALSE 0 0 NA C coding 622 1866 82 1947 PB.7334.1 chr12 + 5820 11 incomplete-splice_match SETD1B ENST00000619791.1 5901 16 2467 -2386 internal_fragment FALSE canonical NA NA 3260 None 2 32 0 FALSE 0 0 NA A coding 1117 3351 81 3431 PB.6428.1 chr11 - 3010 16 full-splice_match SYVN1 ENST00000377190.7 3052 16 36 6 no_subtype FALSE canonical NA NA 42 None 129 3 0 FALSE 0 0 NA C coding 617 1851 60 1910 PB.10224.2 chr20 - 4192 3 novel_not_in_catalog SDCBP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2279 None 4 27 2 TRUE 0 0 NA B coding 142 426 1969 2394 PB.7482.1 chr13 + 1523 6 full-splice_match ITM2B ENST00000378565.9 10137 6 124 8490 no_subtype FALSE canonical NA NA 794 None 310 1 0 FALSE 0 0 NA A coding 266 798 80 877 PB.7950.2 chr14 + 5848 25 novel_not_in_catalog INF2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5742 None 2 24 4 TRUE 0 0 NA B coding 864 2592 137 2728 PB.6428.4 chr11 - 3111 15 novel_in_catalog SYVN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 64 None 2 18 1 FALSE 0 0 NA C coding 654 1962 82 2043 PB.784.10 chr1 - 2884 15 novel_not_in_catalog DCAF8 novel NA NA NA NA no_subtype FALSE canonical NA NA 176 None 2 8 1 TRUE 0 0 NA B coding 597 1791 244 2034 PB.11028.1 chrX - 3046 4 antisense novelGene_NHSL2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 21 None 2 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8347.1 chr16 + 3537 11 incomplete-splice_match CAPN15 ENST00000219611.6 4744 14 1202 5 internal_fragment FALSE canonical NA NA 2244 None 3 15 0 FALSE 0 0 NA A coding 630 1890 530 2419 PB.1575.1 chr2 - 2702 15 full-splice_match ERCC3 ENST00000285398.6 2750 15 37 11 no_subtype FALSE canonical NA NA 86 None 106 2 0 FALSE 0 0 NA C coding 782 2346 59 2404 PB.5252.3 chr9 + 3306 20 novel_in_catalog ACO1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2580 None 2 4 0 FALSE 0 0 NA C coding 889 2667 25 2691 PB.5252.2 chr9 + 3501 21 full-splice_match ACO1 ENST00000309951.7 7466 21 24 3941 no_subtype FALSE canonical NA NA 2670 None 29 5 0 FALSE 0 0 NA C coding 889 2667 115 2781 PB.5252.1 chr9 + 3964 21 novel_not_in_catalog ACO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3133 None 2 12 0 FALSE 0 0 NA C coding 790 2370 875 3244 PB.12.1 chr1 - 1080 5 full-splice_match SSU72 ENST00000291386.3 1290 5 207 3 no_subtype FALSE canonical NA NA 185 None 4 2 0 FALSE 0 0 NA A coding 194 582 106 687 PB.8708.2 chr16 + 2200 11 full-splice_match VPS4A ENST00000254950.12 4100 11 1 1899 no_subtype FALSE canonical NA NA 1367 None 27 9 0 FALSE 0 0 NA C coding 437 1311 156 1466 PB.8708.3 chr16 + 3771 9 novel_in_catalog VPS4A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2938 None 2 26 0 FALSE 0 0 NA C coding 284 852 157 1008 PB.7074.1 chr12 + 1432 6 novel_not_in_catalog TMEM5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1135 None 2 5 1 TRUE 0 0 NA A coding 118 354 1077 1430 PB.6203.1 chr11 - 3941 20 novel_in_catalog MRVI1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 61 None 12 8 0 FALSE 0 0 NA B coding 597 1791 782 2572 PB.9155.3 chr17 + 1835 1 novel_in_catalog DHX8 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 17 0 FALSE 0 0 NA B coding 105 315 1196 1510 PB.6203.2 chr11 - 4042 20 novel_in_catalog MRVI1 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 160 None 5 8 1 FALSE 0 0 NA B coding 861 2583 92 2674 PB.9155.1 chr17 + 6760 24 novel_not_in_catalog DHX8 novel NA NA NA NA no_subtype TRUE canonical NA NA 3596 None 13 27 0 TRUE 0 0 NA B coding 1220 3660 154 3813 PB.2164.2 chr3 + 2856 6 genic_intron novelGene_477 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2665 None 5 11 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.5567.1 chr9 + 4303 26 full-splice_match USP20 ENST00000372429.7 4315 26 7 5 no_subtype FALSE canonical NA NA 2936 None 6 12 0 FALSE 0 0 NA C coding 914 2742 176 2917 PB.5567.2 chr9 + 4259 25 novel_in_catalog USP20 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2892 None 5 10 0 FALSE 0 0 NA C coding 914 2742 132 2873 PB.2164.1 chr3 - 5786 20 novel_not_in_catalog MAP4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 62 None 2 22 0 TRUE 0 0 NA A coding 1123 3369 82 3450 PB.1406.2 chr2 - 5862 4 novel_not_in_catalog TEX261 novel NA NA NA NA no_subtype FALSE canonical NA NA 58 None 2 24 1 TRUE 0 0 NA C coding 105 315 3227 3541 PB.10150.1 chr19 - 2937 4 full-splice_match ZNF616 ENST00000600228.5 4335 4 77 1321 no_subtype FALSE canonical NA NA 109 None 40 0 0 FALSE 0 0 NA A coding 781 2343 186 2528 PB.1128.4 chr1 - 2870 20 incomplete-splice_match ARID4B ENST00000421364.5 5151 25 -56 2337 internal_fragment FALSE canonical NA NA 422 None 3 2 0 FALSE 0 0 NA C coding 799 2397 472 2868 PB.5144.1 chr8 + 2657 3 genic_intron novelGene_1192 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2490 None 2 11 2 FALSE 0 0 NA A coding 114 342 1209 1550 PB.10038.1 chr19 + 4195 5 full-splice_match ZNF155 ENST00000611002.4 2732 5 52 -1515 no_subtype FALSE canonical NA NA 447 None 2 22 0 FALSE 0 0 NA A coding 538 1614 213 1826 PB.10090.2 chr19 - 2671 8 novel_not_in_catalog TMEM143 novel NA NA NA NA no_subtype FALSE canonical NA NA 41 None 2 8 0 TRUE 0 0 NA A coding 217 651 64 714 PB.10291.1 chr20 - 2916 1 genic_intron novelGene_188 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 17 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7958.1 chr14 + 1594 8 full-splice_match C14orf80 ENST00000392522.7 1630 8 64 -28 no_subtype FALSE canonical NA NA 1014 None 5 3 0 FALSE 0 0 NA C coding 426 1278 64 1341 PB.7958.2 chr14 + 1411 7 novel_in_catalog C14orf80 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 802 None 2 3 0 FALSE 0 0 NA C coding 270 810 320 1129 PB.3080.1 chr4 - 3400 19 novel_not_in_catalog LRBA novel NA NA NA NA no_subtype FALSE canonical NA NA 110 None 4 8 0 TRUE 0 0 NA A coding 751 2253 84 2336 PB.274.1 chr1 - 3570 19 novel_not_in_catalog INPP5B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 64 None 2 15 0 TRUE 0 0 NA A coding 749 2247 25 2271 PB.10007.6 chr19 + 2789 15 novel_in_catalog HNRNPUL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2224 None 2 3 1 FALSE 0 0 NA C coding 766 2298 41 2338 PB.9469.1 chr18 - 1528 3 genic_intron novelGene_26 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 814 None 2 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10912.3 chrX + 3878 1 genic_intron novelGene_372 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10007.7 chr19 + 2854 15 novel_in_catalog HNRNPUL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2284 None 2 4 0 FALSE 0 0 NA C coding 756 2268 131 2398 PB.10007.4 chr19 + 2789 15 full-splice_match HNRNPUL1 ENST00000392006.7 3555 15 406 360 no_subtype FALSE canonical NA NA 2221 None 31 1 0 FALSE 0 0 NA C coding 756 2268 68 2335 PB.3513.2 chr5 + 1452 4 full-splice_match PAIP2 ENST00000265192.8 1459 4 23 -16 no_subtype FALSE canonical NA NA 470 None 155 5 0 FALSE 0 0 NA C coding 127 381 153 533 PB.2141.2 chr3 - 3123 2 antisense novelGene_LIMD1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 283 None 4 16 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.3852.12 chr6 - 2693 7 novel_in_catalog DAXX novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 81 None 4 9 1 FALSE 0 0 NA C coding 440 1320 134 1453 PB.3852.11 chr6 - 2485 8 full-splice_match DAXX ENST00000266000.10 2606 8 51 70 no_subtype FALSE canonical NA NA 98 None 48 8 1 FALSE 0 0 NA C coding 740 2220 148 2367 PB.10007.5 chr19 + 3088 15 novel_not_in_catalog HNRNPUL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2520 None 2 7 1 FALSE 0 0 NA C coding 848 2544 91 2634 PB.3513.1 chr5 + 1469 5 novel_not_in_catalog PAIP2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 487 None 3 6 0 TRUE 0 0 NA C coding 127 381 170 550 PB.3852.15 chr6 - 2718 3 antisense novelGene_ZBTB9_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2509 None 6 8 2 FALSE 0 0 NA A coding 123 369 2350 2718 PB.3852.14 chr6 - 738 6 full-splice_match CUTA ENST00000488034.5 769 6 19 12 no_subtype FALSE canonical NA NA 145 None 2 4 0 FALSE 0 0 NA A coding 179 537 104 640 PB.2938.1 chr4 + 2922 1 incomplete-splice_match AFF1 ENST00000395146.8 9285 21 6339 25 no_subtype FALSE canonical NA NA NA None 16 24 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8213.2 chr15 - 3252 26 novel_not_in_catalog MAN2C1 novel NA NA NA NA no_subtype FALSE canonical NA NA 118 None 40 1 0 FALSE 0 0 NA B coding 880 2640 502 3141 PB.1710.18 chr2 - 3571 1 novel_in_catalog WIPF1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9376.3 chr17 - 3519 34 novel_not_in_catalog UNC13D novel NA NA NA NA no_subtype TRUE canonical NA NA 140 None 12 2 0 TRUE 0 0 NA B coding 1090 3270 24 3293 PB.4532.1 chr7 - 3043 9 novel_not_in_catalog PTCD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 88 None 40 9 0 TRUE 0 0 NA A coding 700 2100 115 2214 PB.5623.3 chr9 - 5343 12 novel_not_in_catalog NOTCH1 novel NA NA NA NA no_subtype FALSE canonical NA NA 66 None 3 16 0 TRUE 0 0 NA B coding 976 2928 790 3717 PB.1710.19 chr2 - 5584 1 genic_intron novelGene_1333 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 33 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8335.1 chr15 - 2961 3 novel_not_in_catalog TM2D3 novel NA NA NA NA no_subtype TRUE canonical NA NA 1544 None 18 19 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.10424.4 chr20 - 2644 11 incomplete-splice_match ELMO2 ENST00000396391.5 3574 21 926 4 5prime_fragment FALSE canonical NA NA 110 None 2 2 0 FALSE 0 0 NA B coding 439 1317 24 1340 PB.10424.2 chr20 - 3584 21 novel_in_catalog ELMO2 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 67 None 67 3 0 FALSE 0 0 NA B coding 720 2160 118 2277 PB.11042.1 chrX - 3567 2 antisense novelGene_MAGEE1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2897 None 13 7 1 FALSE 0 0 NA A coding 128 384 3006 3389 PB.9566.9 chr18 - 2731 16 novel_in_catalog MBD1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 117 None 2 9 0 FALSE 0 0 NA C coding 534 1602 143 1744 PB.9566.8 chr18 - 5739 16 novel_not_in_catalog MBD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 111 None 3 15 0 FALSE 0 0 NA C coding 614 1842 137 1978 PB.2565.1 chr3 + 2697 16 novel_not_in_catalog NMD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1470 None 59 12 0 FALSE 0 0 NA B coding 503 1509 90 1598 PB.903.4 chr1 - 2552 6 novel_in_catalog GLUL novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 112 None 2 8 0 FALSE 0 0 NA C coding 207 621 126 746 PB.3011.5 chr4 - 2660 1 genic_intron novelGene_1008 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1957.1 chr2 - 1604 4 full-splice_match MTERF4 ENST00000391980.6 1637 4 25 8 no_subtype FALSE canonical NA NA 55 None 3 3 0 FALSE 0 0 NA A coding 381 1143 35 1177 PB.7309.1 chr12 + 1750 5 novel_not_in_catalog GATC novel NA NA NA NA no_subtype FALSE canonical NA NA 1193 None 4 18 1 TRUE 0 0 NA A coding 136 408 22 429 PB.9294.1 chr17 + 3824 18 full-splice_match DDX42 ENST00000389924.6 3939 18 40 75 no_subtype TRUE canonical NA NA 2276 None 21 7 0 FALSE 0 0 NA A coding 938 2814 165 2978 PB.5543.3 chr9 + 3488 21 full-splice_match ODF2 ENST00000351030.7 3899 21 146 265 no_subtype FALSE canonical NA NA 2527 None 28 4 0 FALSE 0 0 NA C coding 824 2472 242 2713 PB.9566.3 chr18 - 5642 15 novel_not_in_catalog MBD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 148 None 2 18 0 FALSE 0 0 NA C coding 568 1704 174 1877 PB.9566.2 chr18 - 2741 16 full-splice_match MBD1 ENST00000590208.5 2913 16 162 10 no_subtype FALSE canonical NA NA 160 None 19 5 0 FALSE 0 0 NA C coding 655 1965 186 2150 PB.9566.5 chr18 - 2709 15 novel_in_catalog MBD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 81 None 2 3 0 FALSE 0 0 NA C coding 591 1773 107 1879 PB.6283.1 chr11 + 3644 25 novel_in_catalog TTC17 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3475 None 69 0 0 FALSE 0 0 NA C coding 1198 3594 11 3604 PB.6283.2 chr11 + 3442 20 full-splice_match TTC17 ENST00000299240.10 3648 20 13 193 no_subtype FALSE canonical NA NA 2846 None 22 1 0 FALSE 0 0 NA C coding 956 2868 11 2878 PB.9566.6 chr18 - 2829 16 full-splice_match MBD1 ENST00000347968.7 3091 16 260 2 no_subtype FALSE canonical NA NA 152 None 2 11 1 FALSE 0 0 NA C coding 549 1647 178 1824 PB.8620.3 chr16 - 2126 5 novel_not_in_catalog AMFR novel NA NA NA NA no_subtype FALSE canonical NA NA 120 None 9 5 1 FALSE 0 0 NA B coding 190 570 100 669 PB.8152.2 chr15 - 1670 10 novel_not_in_catalog SPG21 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 138 None 3 13 3 TRUE 0 0 NA C coding 154 462 614 1075 PB.8152.1 chr15 - 1740 9 full-splice_match SPG21 ENST00000204566.6 1822 9 75 7 no_subtype FALSE canonical NA NA 197 None 94 4 0 FALSE 0 0 NA C coding 308 924 222 1145 PB.9943.1 chr19 + 2883 11 incomplete-splice_match KMT2B ENST00000420124.2 8469 37 5582 4 internal_fragment FALSE canonical NA NA 2290 None 7 0 0 FALSE 0 0 NA A coding 736 2208 356 2563 PB.369.2 chr1 - 3313 25 full-splice_match CC2D1B ENST00000284376.7 3377 25 32 32 no_subtype FALSE canonical NA NA 79 None 8 8 0 FALSE 0 0 NA C coding 851 2553 97 2649 PB.10961.2 chrX - 1471 4 novel_not_in_catalog OTUD5 novel NA NA NA NA no_subtype FALSE canonical NA NA 73 None 2 6 0 FALSE 0 0 NA B coding 99 297 212 508 PB.10961.1 chrX - 1498 4 novel_not_in_catalog OTUD5 novel NA NA NA NA no_subtype FALSE canonical NA NA 98 None 8 6 0 FALSE 0 0 NA B coding 99 297 237 533 PB.369.1 chr1 - 2941 25 novel_in_catalog CC2D1B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 79 None 3 2 0 FALSE 0 0 NA C coding 851 2553 97 2649 PB.5687.5 chr10 - 2489 1 genic_intron novelGene_122 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 18 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5687.6 chr10 - 5461 2 genic_intron novelGene_122 novel NA NA NA NA no_subtype FALSE canonical NA NA 2975 None 3 40 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5687.1 chr10 - 3159 6 novel_not_in_catalog FAM107B novel NA NA NA NA no_subtype FALSE canonical NA NA 86 None 5 17 1 TRUE 0 0 NA B coding 169 507 36 542 PB.8199.1 chr15 + 3290 10 full-splice_match CD276 ENST00000318443.9 3469 10 170 9 no_subtype TRUE canonical NA NA 1714 None 14 8 0 FALSE 0 0 NA A coding 534 1602 133 1734 PB.5687.3 chr10 - 1651 1 incomplete-splice_match FAM107B ENST00000468747.5 2633 4 971 12 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5687.2 chr10 - 3143 5 novel_not_in_catalog FAM107B novel NA NA NA NA no_subtype FALSE canonical NA NA 80 None 2 18 2 TRUE 0 0 NA B coding 131 393 137 529 PB.1081.1 chr1 + 1636 11 novel_not_in_catalog EPHX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1224 None 30 4 0 TRUE 0 0 NA A coding 455 1365 59 1423 PB.5796.1 chr10 + 1862 8 full-splice_match CDK1 ENST00000395284.7 1913 8 42 9 no_subtype FALSE canonical NA NA 895 None 2 4 0 FALSE 0 0 NA A coding 297 891 101 991 PB.1231.2 chr2 - 2841 8 novel_not_in_catalog PREB novel NA NA NA NA no_subtype FALSE canonical NA NA 1102 None 6 7 0 TRUE 0 0 NA B coding 274 822 994 1815 PB.2684.1 chr3 - 2963 14 novel_not_in_catalog UBXN7 novel NA NA NA NA no_subtype FALSE canonical NA NA 101 None 5 16 1 TRUE 0 0 NA A coding 489 1467 29 1495 PB.2977.8 chr4 - 4638 1 genic_intron novelGene_923 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 25 0 FALSE 0 0 NA B coding 126 378 492 869 PB.1231.1 chr2 - 2073 10 novel_not_in_catalog PREB novel NA NA NA NA no_subtype FALSE canonical NA NA 317 None 18 6 0 TRUE 0 0 NA B coding 417 1251 183 1433 PB.7787.2 chr14 + 5573 5 novel_in_catalog SUSD6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2088 None 2 26 0 FALSE 0 0 NA C coding 138 414 1698 2111 PB.7531.7 chr13 - 5615 28 incomplete-splice_match MYCBP2 ENST00000544440.6 14664 83 9044 5 5prime_fragment FALSE canonical NA NA 644 None 6 4 0 FALSE 0 0 NA B coding 1630 4890 5 4894 PB.2977.4 chr4 - 2981 1 novel_in_catalog PPP3CA novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7787.1 chr14 + 4243 6 full-splice_match SUSD6 ENST00000342745.4 5388 6 148 997 no_subtype FALSE canonical NA NA 1051 None 27 15 0 FALSE 0 0 NA C coding 303 909 166 1074 PB.2977.2 chr4 - 2536 13 full-splice_match PPP3CA ENST00000394853.8 3604 13 -227 1295 no_subtype FALSE canonical NA NA 816 None 11 7 0 FALSE 0 0 NA C coding 511 1533 759 2291 PB.9475.1 chr18 - 3840 20 novel_not_in_catalog EPB41L3 novel NA NA NA NA no_subtype FALSE canonical NA NA 287 None 2 5 0 TRUE 0 0 NA B coding 721 2163 593 2755 PB.2381.1 chr3 - 3778 1 novel_in_catalog NAA50 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9475.3 chr18 - 3810 21 novel_not_in_catalog EPB41L3 novel NA NA NA NA no_subtype FALSE canonical NA NA 116 None 2 4 0 TRUE 0 0 NA B coding 865 2595 128 2722 PB.8428.1 chr16 + 1584 1 antisense novelGene_USP7_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 11 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9924.1 chr19 + 5722 13 novel_in_catalog KIAA0355 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 3702 None 2 13 0 FALSE 0 0 NA A coding 1070 3210 799 4008 PB.11149.1 chrX - 2847 12 novel_not_in_catalog ZDHHC9 novel NA NA NA NA no_subtype FALSE canonical NA NA 120 None 11 3 0 TRUE 0 0 NA A coding 364 1092 324 1415 PB.4691.3 chr7 - 2993 1 novel_in_catalog CNOT4 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 9 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4691.2 chr7 - 3528 12 full-splice_match CNOT4 ENST00000451834.5 3507 12 -27 6 no_subtype FALSE canonical NA NA 219 None 9 1 0 FALSE 0 0 NA C coding 710 2130 312 2441 PB.4691.1 chr7 - 3318 11 full-splice_match CNOT4 ENST00000423368.6 3297 11 -24 3 no_subtype FALSE canonical NA NA 213 None 3 9 1 FALSE 0 0 NA C coding 642 1926 306 2231 PB.8196.3 chr15 - 2420 7 full-splice_match ADPGK ENST00000311669.12 2557 7 45 92 no_subtype FALSE canonical NA NA 282 None 7 7 1 FALSE 0 0 NA C coding 496 1488 50 1537 PB.8476.1 chr16 - 1615 7 novel_not_in_catalog GDE1 novel NA NA NA NA no_subtype FALSE canonical NA NA 421 None 24 0 0 FALSE 0 0 NA A coding 331 993 161 1153 PB.5575.1 chr9 + 2778 1 incomplete-splice_match ABL1 ENST00000318560.5 5766 11 2979 10 no_subtype FALSE canonical NA NA NA None 4 12 0 FALSE 0 0 NA A coding 81 243 550 792 PB.838.1 chr1 + 2743 16 full-splice_match POU2F1 ENST00000367862.9 14038 16 29 11266 no_subtype FALSE canonical NA NA 2163 None 7 3 0 FALSE 0 0 NA A coding 755 2265 207 2471 PB.10180.1 chr19 - 2889 4 novel_in_catalog ZNF667 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 94 None 4 7 0 FALSE 0 0 NA A coding 610 1830 62 1891 PB.945.1 chr1 - 3165 1 genic_intron novelGene_1372 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 10 14 0 FALSE 0 0 NA A coding 103 309 2667 2975 PB.488.4 chr1 + 2746 2 genic_intron novelGene_850 novel NA NA NA NA no_subtype FALSE canonical NA NA 1014 None 2 40 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.858.1 chr1 + 2847 24 novel_in_catalog C1orf112 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2553 None 15 4 0 FALSE 0 0 NA A coding 911 2733 16 2748 PB.1014.3 chr1 + 1547 10 novel_not_in_catalog CD55 novel NA NA NA NA no_subtype FALSE canonical NA NA 1173 None 6 1 0 FALSE 0 0 NA C coding 374 1122 93 1214 PB.10969.1 chrX + 948 5 full-splice_match PLP2 ENST00000376327.5 1079 5 -28 159 no_subtype FALSE canonical NA NA 539 None 10 1 0 FALSE 0 0 NA A coding 152 456 104 559 PB.361.1 chr1 + 2973 2 antisense novelGene_EPS15_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2440 None 2 20 0 FALSE 0 0 NA A coding 81 243 90 332 PB.11155.1 chrX - 2670 11 novel_in_catalog IGSF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 93 None 6 0 0 FALSE 0 0 NA A coding 775 2325 60 2384 PB.8196.2 chr15 - 2812 8 novel_not_in_catalog ADPGK novel NA NA NA NA no_subtype FALSE canonical NA NA 463 None 2 5 0 FALSE 0 0 NA C coding 374 1122 717 1838 PB.3545.8 chr5 - 5561 30 novel_not_in_catalog DIAPH1 novel NA NA NA NA no_subtype FALSE canonical NA NA 131 None 3 16 3 TRUE 0 0 NA B coding 741 2223 15 2237 PB.8263.7 chr15 + 6257 1 novel_in_catalog TM6SF1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 56 0 FALSE 0 0 NA C coding 104 312 2970 3281 PB.8263.1 chr15 + 6151 8 novel_not_in_catalog TM6SF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 5732 None 3 32 1 TRUE 0 0 NA C coding 152 456 5466 5921 PB.8263.2 chr15 + 1373 10 full-splice_match TM6SF1 ENST00000322019.13 2074 10 263 438 no_subtype FALSE canonical NA NA 932 None 8 3 0 FALSE 0 0 NA C coding 370 1110 12 1121 PB.8263.3 chr15 + 3910 9 novel_not_in_catalog TM6SF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3469 None 2 19 1 TRUE 0 0 NA C coding 152 456 3203 3658 PB.4982.1 chr8 + 4396 11 novel_in_catalog HNF4G novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1534 None 3 15 0 FALSE 0 0 NA C coding 408 1224 430 1653 PB.4982.2 chr8 + 4023 10 novel_in_catalog HNF4G novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1173 None 2 14 0 FALSE 0 0 NA C coding 408 1224 69 1292 PB.4982.3 chr8 + 4177 10 full-splice_match HNF4G ENST00000396423.2 4209 10 8 24 no_subtype FALSE canonical NA NA 1332 None 2 20 0 FALSE 0 0 NA C coding 461 1383 69 1451 PB.8494.1 chr16 + 2508 13 full-splice_match SCNN1B ENST00000343070.6 2597 13 69 20 no_subtype FALSE canonical NA NA 1649 None 7 3 0 FALSE 0 0 NA A coding 640 1920 108 2027 PB.446.1 chr1 - 2695 15 full-splice_match ADGRL4 ENST00000370742.3 3527 15 -12 844 no_subtype FALSE canonical NA NA 98 None 18 3 0 FALSE 0 0 NA A coding 690 2070 77 2146 PB.5151.1 chr8 - 1689 13 full-splice_match NAPRT ENST00000449291.6 1965 13 271 5 no_subtype FALSE canonical NA NA 250 None 22 2 0 FALSE 0 0 NA C coding 538 1614 25 1638 PB.7215.1 chr12 + 4216 30 novel_not_in_catalog POLR3B novel NA NA NA NA no_subtype TRUE canonical NA NA 3441 None 8 6 0 TRUE 0 0 NA A coding 1133 3399 170 3568 PB.4176.4 chr6 - 3179 6 full-splice_match PLAGL1 ENST00000629195.2 723 6 -138 -2318 no_subtype FALSE canonical NA NA 167 None 2 11 1 FALSE 0 0 NA C coding 463 1389 670 2058 PB.4176.1 chr6 - 2894 6 novel_in_catalog PLAGL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 315 None 2 12 0 FALSE 0 0 NA C coding 411 1233 538 1770 PB.7516.1 chr13 - 2954 2 novel_not_in_catalog PCDH9 novel NA NA NA NA no_subtype FALSE canonical NA NA 228 None 2 6 0 FALSE 0 0 NA A coding 863 2589 364 2952 PB.3545.9 chr5 - 5571 29 novel_not_in_catalog DIAPH1 novel NA NA NA NA no_subtype FALSE canonical NA NA 172 None 5 15 2 TRUE 0 0 NA B coding 722 2166 86 2251 PB.3294.2 chr5 + 1844 13 full-splice_match TRAPPC13 ENST00000399438.7 3221 13 278 1099 no_subtype FALSE canonical NA NA 1213 None 5 4 0 FALSE 0 0 NA A coding 417 1251 68 1318 PB.3718.2 chr6 + 1700 1 genic_intron novelGene_34 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.676.2 chr1 + 1285 11 novel_not_in_catalog PSMD4 novel NA NA NA NA no_subtype FALSE canonical NA NA 999 None 2 2 0 TRUE 0 0 NA B coding 380 1140 28 1167 PB.676.1 chr1 + 1298 11 novel_not_in_catalog PSMD4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1012 None 16 0 0 TRUE 0 0 NA B coding 377 1131 50 1180 PB.3718.1 chr6 + 4435 15 full-splice_match PRPF4B ENST00000337659.10 4415 15 -26 6 no_subtype FALSE canonical NA NA 2946 None 3 3 0 FALSE 0 0 NA A coding 1007 3021 127 3147 PB.946.15 chr1 + 2141 23 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2021 None 6 7 0 TRUE 0 0 NA B coding 685 2055 87 2141 PB.4685.1 chr7 + 1705 3 full-splice_match BPGM ENST00000344924.7 1753 3 46 2 no_subtype FALSE canonical NA NA 746 None 11 2 0 FALSE 0 0 NA A coding 259 777 146 922 PB.3625.1 chr5 + 1420 8 full-splice_match TTC1 ENST00000231238.9 1467 8 43 4 no_subtype FALSE canonical NA NA 812 None 39 3 0 FALSE 0 0 NA A coding 292 876 68 943 PB.946.16 chr1 + 2887 27 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2846 None 3 17 2 TRUE 0 0 NA B coding 932 2796 90 2885 PB.946.11 chr1 + 2786 26 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2745 None 2 21 2 TRUE 0 0 NA B coding 616 1848 937 2784 PB.7863.5 chr14 - 2721 2 novel_not_in_catalog TC2N novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1568 None 5 21 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.946.13 chr1 + 2767 26 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2724 None 17 8 1 TRUE 0 0 NA B coding 900 2700 67 2766 PB.946.12 chr1 + 2478 26 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2433 None 19 4 0 TRUE 0 0 NA B coding 803 2409 70 2478 PB.8412.1 chr16 - 1733 4 antisense novelGene_DNAJA3_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1227 None 2 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8907.1 chr17 - 2675 17 full-splice_match FXR2 ENST00000250113.11 2957 17 281 1 no_subtype FALSE canonical NA NA 135 None 2 9 0 FALSE 0 0 NA A coding 673 2019 55 2073 PB.9952.1 chr19 - 1777 5 full-splice_match ZNF565 ENST00000304116.9 2023 5 18 228 no_subtype FALSE canonical NA NA 34 None 2 3 0 FALSE 0 0 NA A coding 499 1497 100 1596 PB.3466.1 chr5 + 1404 1 genic_intron novelGene_1144 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10993.1 chrX + 2038 13 full-splice_match MAGED2 ENST00000375068.5 2189 13 147 4 no_subtype TRUE canonical NA NA 1915 None 22 2 0 FALSE 0 0 NA C coding 606 1818 87 1904 PB.10993.2 chrX + 2000 13 full-splice_match MAGED2 ENST00000375058.5 2048 13 51 -3 no_subtype FALSE canonical NA NA 1870 None 13 2 0 FALSE 0 0 NA C coding 606 1818 42 1859 PB.10993.3 chrX + 2124 13 novel_in_catalog MAGED2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1991 None 2 9 0 FALSE 0 0 NA C coding 606 1818 163 1980 PB.6426.1 chr11 - 498 5 full-splice_match FAU ENST00000529639.5 847 5 341 8 no_subtype FALSE canonical NA NA 43 None 3 3 0 FALSE 0 0 NA A coding 133 399 52 450 PB.9169.6 chr17 + 2054 13 novel_not_in_catalog GRN novel NA NA NA NA no_subtype FALSE canonical NA NA 1612 None 2 2 0 FALSE 0 0 NA C coding 569 1707 41 1747 PB.10338.2 chr20 - 1704 14 novel_not_in_catalog PIGU novel NA NA NA NA no_subtype FALSE canonical NA NA 206 None 2 3 0 TRUE 0 0 NA C coding 435 1305 77 1381 PB.10338.1 chr20 - 1653 12 full-splice_match PIGU ENST00000217446.7 1632 12 -24 3 no_subtype FALSE canonical NA NA 154 None 11 2 0 FALSE 0 0 NA C coding 435 1305 25 1329 PB.1006.2 chr1 + 3107 24 novel_not_in_catalog IKBKE novel NA NA NA NA no_subtype FALSE canonical NA NA 2339 None 2 3 0 TRUE 0 0 NA B coding 305 915 369 1283 PB.951.3 chr1 - 3391 1 incomplete-splice_match KIF21B ENST00000332129.6 9897 34 6502 5 no_subtype FALSE canonical NA NA NA None 4 13 0 FALSE 0 0 NA B coding 123 369 918 1286 PB.951.2 chr1 - 6726 20 incomplete-splice_match KIF21B ENST00000360529.9 5389 34 2263 -3600 5prime_fragment FALSE canonical NA NA 39 None 2 23 0 FALSE 0 0 NA B coding 856 2568 25 2592 PB.6549.1 chr11 + 5255 37 novel_not_in_catalog MYO7A novel NA NA NA NA no_subtype FALSE canonical NA NA 4629 None 5 3 1 TRUE 0 0 NA A coding 1558 4674 43 4716 PB.7853.3 chr14 + 2065 17 novel_not_in_catalog TDP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1796 None 4 6 0 TRUE 0 0 NA C coding 608 1824 44 1867 PB.7853.1 chr14 + 3450 5 novel_not_in_catalog TDP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3149 None 2 25 0 TRUE 0 0 NA C coding 220 660 52 711 PB.1961.3 chr2 - 6221 30 novel_not_in_catalog HDLBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 101 None 2 35 0 TRUE 0 0 NA B coding 1268 3804 204 4007 PB.5538.1 chr9 - 3446 26 novel_not_in_catalog GOLGA2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 40 None 2 13 1 TRUE 0 0 NA B coding 932 2796 111 2906 PB.2063.1 chr3 + 2548 14 full-splice_match RBMS3 ENST00000452462.5 1547 14 -60 -941 no_subtype TRUE canonical NA NA 1449 None 3 18 1 FALSE 0 0 NA C coding 421 1263 191 1453 PB.8595.2 chr16 + 2915 1 novel_in_catalog LONP2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5691.1 chr10 - 3833 8 full-splice_match FAM171A1 ENST00000378116.8 3952 8 -24 143 no_subtype FALSE canonical NA NA 128 None 7 2 0 FALSE 0 0 NA A coding 890 2670 32 2701 PB.8166.2 chr15 + 3889 19 novel_not_in_catalog DIS3L novel NA NA NA NA no_subtype FALSE canonical NA NA 3616 None 2 7 1 TRUE 0 0 NA B coding 562 1686 81 1766 PB.1630.1 chr2 - 2837 1 genic_intron novelGene_1218 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 10 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8166.1 chr15 + 3619 19 novel_not_in_catalog DIS3L novel NA NA NA NA no_subtype FALSE canonical NA NA 3333 None 24 5 1 TRUE 0 0 NA B coding 1054 3162 9 3170 PB.11076.1 chrX - 1970 10 novel_in_catalog NOX1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 245 None 2 7 0 FALSE 0 0 NA A coding 382 1146 201 1346 PB.5526.8 chr9 - 3565 12 novel_not_in_catalog SH2D3C novel NA NA NA NA no_subtype FALSE canonical NA NA 158 None 13 6 0 FALSE 0 0 NA C coding 667 2001 122 2122 PB.5115.2 chr8 + 3097 1 full-splice_match RN7SL329P ENST00000467740.3 299 1 -2800 2 no_subtype FALSE canonical NA NA NA None 4 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6394.1 chr11 - 6843 14 novel_not_in_catalog ATL3 novel NA NA NA NA no_subtype TRUE canonical NA NA 81 None 4 44 0 TRUE 0 0 NA C coding 541 1623 36 1658 PB.7640.1 chr14 + 3208 10 full-splice_match NFATC4 ENST00000250373.8 4749 10 -14 1555 no_subtype FALSE canonical NA NA 2796 None 5 4 0 FALSE 0 0 NA A coding 902 2706 156 2861 PB.343.2 chr1 - 1539 4 novel_not_in_catalog IPP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 46 None 2 7 0 TRUE 0 0 NA B coding 251 753 97 849 PB.1909.1 chr2 - 1463 1 full-splice_match TPM3P8 ENST00000330554.4 643 1 446 -1266 no_subtype FALSE canonical NA NA NA None 11 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.343.1 chr1 - 2888 10 novel_not_in_catalog IPP novel NA NA NA NA no_subtype FALSE canonical NA NA 22 None 4 9 0 TRUE 0 0 NA B coding 584 1752 73 1824 PB.1646.1 chr2 - 1556 1 genic_intron novelGene_1245 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4457.1 chr7 + 3142 15 full-splice_match LIMK1 ENST00000538333.3 2170 15 92 -1064 no_subtype FALSE canonical NA NA 1758 None 4 5 0 FALSE 0 0 NA A coding 613 1839 80 1918 PB.6084.1 chr10 + 2997 1 genic_intron novelGene_1097 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A coding 99 297 635 931 PB.2150.1 chr3 + 1449 2 full-splice_match CCR5 ENST00000292303.4 3450 2 75 1926 no_subtype FALSE canonical NA NA 60 None 3 1 0 FALSE 0 0 NA A coding 352 1056 72 1127 PB.9336.1 chr17 - 3860 2 novel_in_catalog LINC00511 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 599 None 2 27 0 FALSE 0 0 NA A coding 107 321 3042 3362 PB.2625.1 chr3 + 1895 11 full-splice_match AP2M1 ENST00000382456.7 2091 11 193 3 no_subtype FALSE canonical NA NA 1288 None 259 3 0 FALSE 0 0 NA C coding 433 1299 122 1420 PB.9476.1 chr18 + 2876 2 genic_intron novelGene_56 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1397 None 9 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9467.1 chr18 - 2994 9 full-splice_match METTL4 ENST00000574538.1 2742 9 248 -500 no_subtype FALSE canonical NA NA 90 None 4 12 0 FALSE 0 0 NA A coding 472 1416 529 1944 PB.10014.4 chr19 - 4300 5 novel_not_in_catalog CEACAM7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 163 None 5 22 0 TRUE 0 0 NA B coding 265 795 100 894 PB.1850.3 chr2 - 1639 14 novel_not_in_catalog TNS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 139 None 2 5 1 FALSE 0 0 NA B coding 402 1206 104 1309 PB.6666.2 chr11 - 1748 5 novel_not_in_catalog CD3D novel NA NA NA NA no_subtype FALSE canonical NA NA 53 None 2 1 0 FALSE 0 0 NA A coding 183 549 1112 1660 PB.1494.1 chr2 - 2083 11 full-splice_match ACTR1B ENST00000289228.6 2243 11 108 52 no_subtype TRUE canonical NA NA 157 None 13 9 0 FALSE 0 0 NA A coding 376 1128 110 1237 PB.4860.1 chr8 + 6217 7 full-splice_match EXTL3 ENST00000220562.8 6483 7 263 3 no_subtype FALSE canonical NA NA 3189 None 5 14 0 FALSE 0 0 NA A coding 919 2757 640 3396 PB.3631.1 chr5 + 2441 8 novel_not_in_catalog CCNG1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1100 None 33 8 0 TRUE 0 0 NA A coding 249 747 348 1094 PB.9635.3 chr19 - 2763 9 novel_not_in_catalog TMEM259 novel NA NA NA NA no_subtype FALSE canonical NA NA 79 None 3 13 0 FALSE 0 0 NA B coding 199 597 302 898 PB.1198.2 chr2 + 2435 26 full-splice_match DDX1 ENST00000233084.7 2739 26 290 14 no_subtype FALSE canonical NA NA 2115 None 7 0 0 FALSE 0 0 NA C coding 740 2220 24 2243 PB.1198.1 chr2 + 2464 27 novel_not_in_catalog DDX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2142 None 6 0 0 TRUE 0 0 NA C coding 740 2220 51 2270 PB.11168.1 chrX + 3463 17 full-splice_match INTS6L ENST00000370752.4 3793 17 293 37 no_subtype FALSE canonical NA NA 2518 None 13 4 0 FALSE 0 0 NA A coding 861 2583 42 2624 PB.1245.3 chr2 + 2658 1 genic_intron novelGene_278 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A coding 109 327 1765 2091 PB.1533.2 chr2 + 1418 7 novel_not_in_catalog CD8BP novel NA NA NA NA no_subtype FALSE canonical NA NA 634 None 4 4 0 TRUE 0 0 NA B coding 246 738 15 752 PB.6213.1 chr11 + 3248 17 novel_not_in_catalog SPON1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2456 None 5 6 0 TRUE 0 0 NA A coding 807 2421 197 2617 PB.3792.1 chr6 + 3642 7 novel_not_in_catalog HFE novel NA NA NA NA no_subtype FALSE canonical NA NA 1601 None 7 25 2 TRUE 0 0 NA A coding 348 1044 4 1047 PB.10983.1 chrX - 5643 26 full-splice_match KDM5C ENST00000375379.7 5245 26 300 -698 no_subtype FALSE canonical NA NA 383 None 48 5 1 FALSE 0 0 NA C coding 1557 4671 234 4904 PB.2762.2 chr4 + 3496 6 novel_not_in_catalog MED28 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2398 None 2 24 2 TRUE 0 0 NA B coding 178 534 14 547 PB.3359.1 chr5 + 1531 8 novel_not_in_catalog XRCC4 novel NA NA NA NA no_subtype FALSE canonical NA NA 905 None 3 2 0 TRUE 0 0 NA B coding 334 1002 13 1014 PB.2855.2 chr4 + 2928 8 novel_not_in_catalog POLR2B novel NA NA NA NA no_subtype FALSE canonical NA NA 2667 None 7 22 0 TRUE 0 0 NA C coding 221 663 2092 2754 PB.8207.2 chr15 - 2759 15 full-splice_match ULK3 ENST00000570276.5 2951 15 190 2 no_subtype FALSE canonical NA NA 153 None 4 9 0 FALSE 0 0 NA C coding 198 594 1055 1648 PB.3437.1 chr5 + 2572 24 full-splice_match HSD17B4 ENST00000256216.10 2683 24 106 5 no_subtype FALSE canonical NA NA 2148 None 31 2 0 FALSE 0 0 NA A coding 736 2208 28 2235 PB.8207.1 chr15 - 2556 16 full-splice_match ULK3 ENST00000440863.6 2623 16 59 8 no_subtype FALSE canonical NA NA 135 None 11 8 0 FALSE 0 0 NA C coding 472 1416 34 1449 PB.8521.1 chr16 - 5801 1 novel_in_catalog XPO6 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 16 39 0 FALSE 0 0 NA B coding 108 324 3851 4174 PB.2503.1 chr3 + 1522 3 full-splice_match RNF7 ENST00000273480.3 2763 3 127 1114 no_subtype FALSE canonical NA NA 234 None 25 6 0 FALSE 0 0 NA A coding 113 339 12 350 PB.8207.4 chr15 - 3023 16 novel_in_catalog ULK3 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 602 None 2 13 0 FALSE 0 0 NA C coding 382 1146 768 1913 PB.8207.5 chr15 - 3221 15 novel_in_catalog ULK3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 616 None 2 13 1 FALSE 0 0 NA C coding 198 594 1518 2111 PB.5362.5 chr9 - 1667 7 intergenic novelGene_833 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 79 None 2 17 3 FALSE 0 0 NA B non_coding NA NA NA NA PB.10274.1 chr20 + 2743 1 genic_intron novelGene_74 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5802.1 chr10 + 2526 1 genic_intron novelGene_600 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 17 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4677.1 chr7 - 3508 2 novel_not_in_catalog PODXL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1610 None 6 37 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.353.1 chr1 + 2791 6 full-splice_match CMPK1 ENST00000371873.9 2930 6 111 28 no_subtype FALSE canonical NA NA 683 None 352 13 0 FALSE 0 0 NA C coding 228 684 39 722 PB.932.3 chr1 + 3814 6 novel_not_in_catalog RGS18 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 592 None 5 21 1 TRUE 0 0 NA C coding 235 705 143 847 PB.977.1 chr1 + 1529 1 incomplete-splice_match BTG2 ENST00000290551.4 2712 2 1174 10 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA C coding 122 366 830 1195 PB.8501.1 chr16 - 3955 13 novel_not_in_catalog PALB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 150 None 4 5 1 FALSE 0 0 NA A coding 1122 3366 103 3468 PB.1881.1 chr2 - 2818 4 full-splice_match CHPF ENST00000243776.10 3013 4 183 12 no_subtype FALSE canonical NA NA 380 None 78 3 0 FALSE 0 0 NA A coding 775 2325 67 2391 PB.1190.1 chr2 - 1649 13 full-splice_match PDIA6 ENST00000272227.7 2338 13 82 607 no_subtype FALSE canonical NA NA 85 None 124 1 0 FALSE 0 0 NA A coding 440 1320 67 1386 PB.8741.1 chr16 - 2746 11 full-splice_match MLKL ENST00000308807.11 2523 11 -224 1 no_subtype TRUE canonical NA NA 686 None 2 30 0 FALSE 0 0 NA A coding 471 1413 689 2101 PB.1915.2 chr2 - 3619 3 antisense novelGene_B3GNT7_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 603 None 22 16 2 FALSE 0 0 NA A coding 168 504 2335 2838 PB.10840.2 chr22 - 2649 19 novel_in_catalog HDAC10 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 308 None 2 15 2 FALSE 0 0 NA A coding 380 1140 250 1389 PB.4484.1 chr7 + 2595 15 novel_in_catalog CD36 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1697 None 2 10 0 FALSE 0 0 NA B coding 472 1416 279 1694 PB.7094.1 chr12 - 2772 8 novel_not_in_catalog TMBIM4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 118 None 5 21 0 TRUE 0 0 NA C coding 238 714 22 735 PB.9789.1 chr19 - 3496 6 novel_not_in_catalog ZNF709 novel NA NA NA NA no_subtype TRUE canonical NA NA 70 None 5 9 1 TRUE 0 0 NA A coding 641 1923 140 2062 PB.4808.3 chr8 - 3208 9 full-splice_match MTUS1 ENST00000634613.1 1193 9 97 -2112 no_subtype FALSE canonical NA NA 121 None 6 20 0 FALSE 0 0 NA C coding 342 1026 68 1093 PB.4808.1 chr8 - 3253 9 incomplete-splice_match MTUS1 ENST00000544260.3 3650 12 386 11 5prime_fragment FALSE canonical NA NA 158 None 4 18 0 FALSE 0 0 NA C coding 240 720 411 1130 PB.1370.2 chr2 + 1442 10 novel_not_in_catalog MDH1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1117 None 2 2 0 FALSE 0 0 NA C coding 352 1056 185 1240 PB.8872.1 chr17 + 3809 21 incomplete-splice_match KIF1C ENST00000320785.9 7919 23 402 3708 internal_fragment TRUE canonical NA NA 2583 None 2 6 0 FALSE 0 0 NA A coding 1074 3222 43 3264 PB.6890.1 chr12 + 5594 9 novel_not_in_catalog TSPAN11 novel NA NA NA NA no_subtype FALSE canonical NA NA 4263 None 2 43 0 TRUE 0 0 NA A coding 253 759 165 923 PB.4021.2 chr6 - 3182 30 novel_not_in_catalog SNX14 novel NA NA NA NA no_subtype FALSE canonical NA NA 324 None 5 5 2 TRUE 0 0 NA B coding 939 2817 206 3022 PB.9425.13 chr17 + 6849 17 novel_not_in_catalog RNF213 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5841 None 2 40 4 TRUE 0 0 NA B coding 210 630 5363 5992 PB.10119.1 chr19 + 2080 17 full-splice_match TBC1D17 ENST00000221543.9 2366 17 284 2 no_subtype FALSE canonical NA NA 1761 None 3 1 1 FALSE 0 0 NA A coding 648 1944 16 1959 PB.6607.3 chr11 + 4621 9 full-splice_match BIRC3 ENST00000263464.7 5197 9 -1 577 no_subtype FALSE canonical NA NA 4372 None 8 15 0 FALSE 0 0 NA C coding 604 1812 2752 4563 PB.7697.2 chr14 - 2793 21 novel_not_in_catalog PYGL novel NA NA NA NA no_subtype TRUE canonical NA NA 323 None 86 4 1 TRUE 0 0 NA A coding 497 1491 1135 2625 PB.4184.1 chr6 - 1467 1 full-splice_match KATNBL1P6 ENST00000562413.2 1466 1 -26 25 no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA A coding 164 492 432 923 PB.521.2 chr1 + 3585 2 novel_not_in_catalog SLC30A7 novel NA NA NA NA no_subtype FALSE canonical NA NA 832 None 15 25 1 TRUE 0 0 NA C coding 108 324 835 1158 PB.2614.1 chr3 - 2557 7 full-splice_match DCUN1D1 ENST00000632685.1 3147 7 0 590 no_subtype FALSE canonical NA NA 52 None 32 7 0 FALSE 0 0 NA A coding 259 777 50 826 PB.10102.6 chr19 + 5631 1 novel_in_catalog CD37 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 41 0 FALSE 0 0 NA B coding 124 372 292 663 PB.9842.1 chr19 - 1436 11 novel_in_catalog CYP4F11 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 146 None 2 11 2 FALSE 0 0 NA A coding 451 1353 23 1375 PB.5115.1 chr8 + 2309 4 novel_in_catalog NSMCE2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 393 None 2 17 0 FALSE 0 0 NA B coding 157 471 130 600 PB.10102.4 chr19 + 2743 7 novel_not_in_catalog CD37 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2493 None 4 22 1 TRUE 0 0 NA B coding 148 444 112 555 PB.6733.1 chr11 - 2685 1 incomplete-splice_match ETS1 ENST00000535549.5 4594 4 1644 266 no_subtype FALSE canonical NA NA NA None 33 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10848.1 chrX - 1382 4 full-splice_match SLC25A6 ENST00000381401.10 2062 4 578 102 no_subtype FALSE canonical NA NA 248 None 710 4 0 FALSE 0 0 NA A coding 298 894 138 1031 PB.10102.5 chr19 + 2053 7 novel_in_catalog CD37 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 782 None 7 11 0 FALSE 0 0 NA B coding 202 606 303 908 PB.6110.1 chr11 - 3948 12 novel_in_catalog LMNTD2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1825 None 2 29 1 FALSE 0 0 NA A coding 725 2175 1638 3812 PB.10491.2 chr20 + 2992 22 novel_not_in_catalog PRPF6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2741 None 4 21 1 TRUE 0 0 NA B coding 813 2439 71 2509 PB.3555.1 chr5 - 3741 2 full-splice_match SPRY4 ENST00000434127.2 2379 2 4 -1366 no_subtype FALSE canonical NA NA 193 None 2 21 0 FALSE 0 0 NA A coding 299 897 241 1137 PB.8515.1 chr16 + 3492 10 full-splice_match IL4R ENST00000543915.6 3539 10 44 3 no_subtype FALSE canonical NA NA 968 None 134 4 1 FALSE 0 0 NA C coding 825 2475 70 2544 PB.8515.2 chr16 + 3619 11 novel_not_in_catalog IL4R novel NA NA NA NA no_subtype FALSE canonical NA NA 1095 None 11 4 0 FALSE 0 0 NA C coding 825 2475 197 2671 PB.8515.3 chr16 + 5916 4 novel_not_in_catalog IL4R novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5544 None 2 40 1 TRUE 0 0 NA C coding 101 303 2815 3117 PB.10491.1 chr20 + 2899 22 novel_not_in_catalog PRPF6 novel NA NA NA NA no_subtype FALSE canonical NA NA 2647 None 194 2 0 TRUE 0 0 NA B coding 931 2793 2 2794 PB.8515.6 chr16 + 3176 2 novel_not_in_catalog IL4R novel NA NA NA NA no_subtype TRUE non_canonical NA NA 19 None 2 11 0 TRUE 0 0 NA C coding 508 1524 706 2229 PB.8515.7 chr16 + 1609 1 incomplete-splice_match IL4R ENST00000170630.6 3380 9 1769 3 no_subtype FALSE canonical NA NA NA None 7 3 0 FALSE 0 0 NA C coding 137 411 251 661 PB.7515.1 chr13 - 3080 2 full-splice_match PCDH20 ENST00000409204.4 4778 2 359 1339 no_subtype FALSE canonical NA NA 137 None 14 2 0 FALSE 0 0 NA A coding 951 2853 6 2858 PB.10357.3 chr20 + 3718 3 genic_intron novelGene_355 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 411 None 2 23 1 FALSE 0 0 NA A coding 31 93 265 357 PB.8386.1 chr16 + 1085 3 full-splice_match ATP6V0C ENST00000330398.8 1175 3 87 3 no_subtype FALSE canonical NA NA 410 None 28 2 0 FALSE 0 0 NA A coding 155 465 148 612 PB.2982.6 chr4 + 5674 2 novel_in_catalog NFKB1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4812 None 2 41 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1474.9 chr2 - 1289 3 genic IGKC novel NA NA NA NA no_subtype FALSE canonical NA NA 578 None 4 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9865.2 chr19 + 3528 12 full-splice_match SLC27A1 ENST00000252595.11 3594 12 63 3 no_subtype FALSE canonical NA NA 1817 None 14 6 0 FALSE 0 0 NA C coding 646 1938 35 1972 PB.9865.1 chr19 + 3544 13 novel_not_in_catalog SLC27A1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1833 None 2 7 0 FALSE 0 0 NA C coding 646 1938 51 1988 PB.8841.1 chr17 - 2607 10 full-splice_match METTL16 ENST00000263092.10 5711 10 5 3099 no_subtype FALSE canonical NA NA 123 None 3 10 0 FALSE 0 0 NA C coding 562 1686 124 1809 PB.1927.1 chr2 + 3374 29 novel_not_in_catalog DGKD novel NA NA NA NA no_subtype FALSE canonical NA NA 3320 None 2 0 0 TRUE 0 0 NA B coding 1120 3360 15 3374 PB.1927.2 chr2 + 6244 32 novel_not_in_catalog DGKD novel NA NA NA NA no_subtype TRUE canonical NA NA 5029 None 21 25 1 TRUE 0 0 NA B coding 1214 3642 15 3656 PB.6314.1 chr11 - 1650 1 incomplete-splice_match CELF1 ENST00000531165.5 3650 16 1986 15 no_subtype FALSE canonical NA NA NA None 43 4 0 FALSE 0 0 NA B coding 110 330 452 781 PB.2791.1 chr4 + 3024 3 genic RP11-177C12.1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2379 None 2 19 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.1474.3 chr2 - 929 4 novel_not_in_catalog IGKV1-9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 7 8 1 TRUE 0 0 NA A coding 146 438 23 460 PB.1474.2 chr2 - 945 5 novel_not_in_catalog IGKV3-11 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 93 None 5 8 2 TRUE 0 0 NA B coding 140 420 45 464 PB.1474.5 chr2 - 933 4 novel_not_in_catalog IGKV3-11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 82 None 18 11 1 TRUE 0 0 NA B coding 144 432 34 465 PB.9022.1 chr17 - 3772 12 novel_in_catalog CORO6 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 212 None 2 11 0 FALSE 0 0 NA B coding 262 786 276 1061 PB.9022.2 chr17 - 3553 12 novel_in_catalog CORO6 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 209 None 2 19 2 FALSE 0 0 NA B coding 262 786 273 1058 PB.1474.6 chr2 - 925 5 novel_not_in_catalog IGKV3-11 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 82 None 24 11 1 TRUE 0 0 NA B coding 232 696 34 729 PB.9315.3 chr17 - 6297 33 full-splice_match HELZ ENST00000358691.9 13810 33 -8 7521 no_subtype FALSE canonical NA NA 44 None 17 8 2 FALSE 0 0 NA C coding 1942 5826 176 6001 PB.8793.1 chr16 + 1725 9 full-splice_match IRF8 ENST00000268638.9 3030 9 363 942 no_subtype FALSE canonical NA NA 1163 None 162 1 0 FALSE 0 0 NA A coding 426 1278 60 1337 PB.10796.2 chr22 - 3179 7 novel_not_in_catalog DESI1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 275 None 4 22 1 TRUE 0 0 NA B coding 168 504 188 691 PB.10796.1 chr22 - 2876 7 novel_not_in_catalog DESI1 novel NA NA NA NA no_subtype FALSE canonical NA NA 275 None 2 19 0 TRUE 0 0 NA B coding 168 504 188 691 PB.5024.2 chr8 + 1643 1 incomplete-splice_match PLEKHF2 ENST00000315367.3 2881 2 1233 6 no_subtype FALSE canonical NA NA NA None 3 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8793.2 chr16 + 2864 1 genic_intron novelGene_778 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5024.1 chr8 + 2768 2 full-splice_match PLEKHF2 ENST00000315367.3 2881 2 111 2 no_subtype FALSE canonical NA NA 116 None 128 15 0 FALSE 0 0 NA C coding 249 747 131 877 PB.750.1 chr1 + 1643 1 novel_in_catalog RRNAD1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2954.1 chr4 - 2850 1 incomplete-splice_match GPRIN3 ENST00000609438.1 14244 2 8095 3300 no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6748.2 chr11 - 2744 2 novel_not_in_catalog NCAPD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2231 None 2 13 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.2200.4 chr3 - 2783 1 genic_intron novelGene_491 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3226.1 chr5 + 2994 3 genic OXCT1-AS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1784 None 6 13 2 TRUE 0 0 NA A non_coding NA NA NA NA PB.7028.2 chr12 + 1545 13 full-splice_match PA2G4 ENST00000303305.10 2577 13 281 751 no_subtype FALSE canonical NA NA 1257 None 46 2 0 FALSE 0 0 NA C coding 394 1182 139 1320 PB.7028.3 chr12 + 1486 14 novel_not_in_catalog PA2G4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1355 None 5 8 1 TRUE 0 0 NA C coding 394 1182 170 1351 PB.9054.1 chr17 + 1525 8 full-splice_match TMEM98 ENST00000579849.5 4434 8 231 2678 no_subtype FALSE canonical NA NA 673 None 35 2 0 FALSE 0 0 NA A coding 226 678 201 878 PB.10894.1 chr1 + 1670 1 full-splice_match RP11-312J18.5 ENST00000425270.1 1097 1 -92 -481 no_subtype FALSE canonical NA NA NA None 35 6 0 FALSE 0 0 NA C coding 185 555 635 1189 PB.7471.18 chr13 - 2641 8 novel_in_catalog LCP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 32 None 19 9 0 FALSE 0 0 NA C coding 307 921 57 977 PB.2946.2 chr4 + 3771 23 novel_not_in_catalog HERC6 novel NA NA NA NA no_subtype FALSE canonical NA NA 2910 None 2 4 0 TRUE 0 0 NA B coding 986 2958 177 3134 PB.1517.5 chr2 - 521 2 incomplete-splice_match RNF149 ENST00000424632.5 2010 8 87 1402 internal_fragment FALSE canonical NA NA 486 None 3 0 0 FALSE 0 0 NA C coding 165 495 27 521 PB.1517.4 chr2 - 2933 1 novel_in_catalog RNF149 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1517.6 chr2 - 2915 1 genic_intron novelGene_924 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6237.1 chr11 - 2758 6 full-splice_match SPTY2D1 ENST00000336349.5 5754 6 116 2880 no_subtype FALSE canonical NA NA 180 None 14 3 0 FALSE 0 0 NA A coding 685 2055 121 2175 PB.7471.11 chr13 - 3512 15 novel_in_catalog LCP1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 65 None 14 6 0 FALSE 0 0 NA C coding 527 1581 90 1670 PB.7471.12 chr13 - 3663 16 novel_in_catalog LCP1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 90 None 11 5 0 FALSE 0 0 NA C coding 627 1881 115 1995 PB.7471.13 chr13 - 3660 16 novel_not_in_catalog LCP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 88 None 16 8 1 FALSE 0 0 NA C coding 627 1881 113 1993 PB.6844.1 chr12 - 1977 11 full-splice_match PLBD1 ENST00000240617.9 2426 11 436 13 no_subtype FALSE canonical NA NA 332 None 12 2 0 FALSE 0 0 NA C coding 553 1659 218 1876 PB.466.2 chr1 + 3588 22 full-splice_match PKN2 ENST00000370521.7 6121 22 17 2516 no_subtype FALSE canonical NA NA 3093 None 2 9 0 FALSE 0 0 NA C coding 984 2952 343 3294 PB.7580.1 chr13 + 3116 20 full-splice_match CUL4A ENST00000375440.8 2364 20 84 -836 no_subtype FALSE canonical NA NA 2184 None 60 5 0 FALSE 0 0 NA C coding 759 2277 1 2277 PB.1428.1 chr2 - 4158 28 full-splice_match DCTN1 ENST00000409240.5 4365 28 203 4 no_subtype FALSE canonical NA NA 91 None 67 1 0 FALSE 0 0 NA C coding 1236 3708 110 3817 PB.6553.1 chr11 - 3059 1 incomplete-splice_match RSF1 ENST00000308488.10 11550 16 6886 1606 no_subtype FALSE canonical NA NA NA None 4 33 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.856.8 chr1 - 3834 6 novel_in_catalog SELL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 125 None 3 10 0 FALSE 0 0 NA C coding 155 465 3332 3796 PB.7959.39 chr14 - 1506 7 fusion IGHA1,IGHV1-69 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 104 None 11 12 3 TRUE 0 0 NA B coding 254 762 695 1456 PB.6993.1 chr12 + 1643 2 full-splice_match MFSD5 ENST00000329548.4 1760 2 115 2 no_subtype FALSE canonical NA NA 58 None 24 3 1 FALSE 0 0 NA C coding 450 1350 77 1426 PB.7106.3 chr12 + 3102 12 novel_not_in_catalog MDM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2689 None 7 14 0 TRUE 0 0 NA B coding 486 1458 332 1789 PB.10139.1 chr19 - 1983 9 incomplete-splice_match SIGLEC5 ENST00000534261.3 2360 10 370 7 5prime_fragment FALSE canonical NA NA 67 None 4 1 0 FALSE 0 0 NA A coding 551 1653 31 1683 PB.7959.38 chr14 - 1478 9 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 12 5 TRUE 0 0 NA B coding 258 774 11 784 PB.6152.3 chr11 - 2797 1 genic_intron novelGene_30 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 10 0 FALSE 0 0 NA A coding 151 453 1490 1942 PB.6152.2 chr11 - 1514 3 novel_not_in_catalog RHOG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 270 None 2 4 0 TRUE 0 0 NA A coding 191 573 360 932 PB.9871.4 chr19 - 2690 14 novel_not_in_catalog JAK3 novel NA NA NA NA no_subtype FALSE canonical NA NA 66 None 2 8 2 TRUE 0 0 NA B coding 619 1857 80 1936 PB.8998.1 chr17 - 1370 6 novel_not_in_catalog UNC119 novel NA NA NA NA no_subtype FALSE canonical NA NA 278 None 15 1 0 TRUE 0 0 NA A coding 240 720 62 781 PB.1426.2 chr2 + 2713 9 novel_not_in_catalog MTHFD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1530 None 4 14 0 TRUE 0 0 NA B coding 248 744 948 1691 PB.5714.7 chr10 + 1402 2 genic_intron novelGene_260 novel NA NA NA NA no_subtype TRUE canonical NA NA 737 None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2080.1 chr3 + 1112 6 novel_not_in_catalog CMTM7 novel NA NA NA NA no_subtype FALSE canonical NA NA 843 None 2 5 1 FALSE 0 0 NA A coding 175 525 28 552 PB.2080.3 chr3 - 3271 4 full-splice_match CMTM6 ENST00000205636.3 3863 4 588 4 no_subtype FALSE canonical NA NA 213 None 6 23 0 FALSE 0 0 NA C coding 183 549 76 624 PB.9871.3 chr19 - 5058 26 novel_not_in_catalog JAK3 novel NA NA NA NA no_subtype FALSE canonical NA NA 32 None 6 12 1 TRUE 0 0 NA B coding 1124 3372 46 3417 PB.6310.5 chr11 + 5640 32 novel_not_in_catalog MADD novel NA NA NA NA no_subtype FALSE canonical NA NA 4662 None 2 13 2 FALSE 0 0 NA B coding 1522 4566 199 4764 PB.295.1 chr1 + 2761 6 novel_not_in_catalog ZFP69 novel NA NA NA NA no_subtype FALSE canonical NA NA 1400 None 5 9 0 FALSE 0 0 NA A coding 526 1578 959 2536 PB.4759.4 chr7 - 5547 3 novel_not_in_catalog PRKAG2 novel NA NA NA NA no_subtype TRUE canonical NA NA 2982 None 2 37 1 TRUE 0 0 NA B coding 106 318 893 1210 PB.466.4 chr1 + 2996 2 genic_intron novelGene_803 novel NA NA NA NA no_subtype FALSE canonical NA NA 1125 None 6 32 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6661.1 chr11 + 3573 7 full-splice_match IL10RA ENST00000227752.7 3695 7 116 6 no_subtype FALSE canonical NA NA 814 None 448 10 0 FALSE 0 0 NA C coding 578 1734 5 1738 PB.10831.2 chr22 + 2926 4 full-splice_match GRAMD4 ENST00000408031.1 2834 4 -57 -35 no_subtype FALSE canonical NA NA 354 None 2 20 0 FALSE 0 0 NA A coding 101 303 154 456 PB.2303.1 chr3 - 5631 2 novel_not_in_catalog EIF4E3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 38 None 2 37 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.6661.6 chr11 + 1387 1 incomplete-splice_match IL10RA ENST00000227752.7 3695 7 2303 6 no_subtype FALSE canonical NA NA NA None 7 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4504.3 chr7 + 3142 1 incomplete-splice_match ANKIB1 ENST00000265742.7 6081 20 2932 8 no_subtype FALSE canonical NA NA NA None 4 12 0 FALSE 0 0 NA B coding 167 501 211 711 PB.6310.6 chr11 + 5704 33 novel_in_catalog MADD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4729 None 36 11 1 FALSE 0 0 NA B coding 1545 4635 197 4831 PB.6662.1 chr11 - 1629 11 novel_not_in_catalog JAML novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 90 3 0 TRUE 0 0 NA B coding 394 1182 92 1273 PB.9891.1 chr19 - 1100 10 full-splice_match COPE ENST00000262812.8 1141 10 22 19 no_subtype FALSE canonical NA NA 153 None 31 2 0 FALSE 0 0 NA A coding 308 924 28 951 PB.4941.3 chr8 - 2999 8 novel_in_catalog TOX novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 177 None 2 17 0 FALSE 0 0 NA C coding 515 1545 76 1620 PB.8634.1 chr16 + 1882 7 novel_not_in_catalog ARL2BP novel NA NA NA NA no_subtype FALSE canonical NA NA 462 None 31 8 0 TRUE 0 0 NA A coding 163 489 66 554 PB.4941.1 chr8 - 2630 9 full-splice_match TOX ENST00000361421.1 4131 9 128 1373 no_subtype FALSE canonical NA NA 195 None 33 1 0 FALSE 0 0 NA C coding 526 1578 94 1671 PB.3242.1 chr5 - 1514 9 full-splice_match EMB ENST00000303221.9 4281 9 34 2733 no_subtype FALSE canonical NA NA 294 None 4 3 0 FALSE 0 0 NA C coding 277 831 333 1163 PB.2851.5 chr4 + 1861 7 novel_not_in_catalog SRP72 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1307 None 2 8 0 TRUE 0 0 NA B coding 160 480 210 689 PB.434.1 chr1 - 1711 3 novel_in_catalog LRRIQ3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 185 None 2 9 0 FALSE 0 0 NA A coding 200 600 186 785 PB.7959.30 chr14 - 1511 7 fusion IGHV4-4,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 4 16 3 TRUE 0 0 NA B coding 269 807 11 817 PB.9000.1 chr17 - 1604 9 full-splice_match ALDOC ENST00000226253.8 1982 9 366 12 no_subtype FALSE canonical NA NA 98 None 11 1 0 FALSE 0 0 NA C coding 364 1092 111 1202 PB.9000.2 chr17 - 1657 10 full-splice_match ALDOC ENST00000395321.6 1722 10 54 11 no_subtype TRUE canonical NA NA 94 None 2 4 1 FALSE 0 0 NA C coding 364 1092 163 1254 PB.1010.2 chr1 - 3635 2 genic_intron novelGene_1387 novel NA NA NA NA no_subtype FALSE canonical NA NA 3446 None 4 24 0 FALSE 0 0 NA A coding 104 312 299 610 PB.2851.3 chr4 + 3217 20 novel_not_in_catalog SRP72 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2655 None 7 8 0 TRUE 0 0 NA B coding 671 2013 19 2031 PB.10622.1 chr22 + 1755 11 full-splice_match USP18 ENST00000215794.7 2129 11 281 93 no_subtype FALSE canonical NA NA 1222 None 22 10 1 FALSE 0 0 NA A coding 372 1116 150 1265 PB.7778.1 chr14 - 1482 2 full-splice_match ZFP36L1 ENST00000439696.2 3190 2 173 1535 no_subtype FALSE canonical NA NA 186 None 258 4 0 FALSE 0 0 NA C coding 338 1014 130 1143 PB.1010.1 chr1 - 1454 1 novel_in_catalog Y_RNA novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 10 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7959.36 chr14 - 1496 9 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 117 None 3 19 5 TRUE 0 0 NA B coding 116 348 72 419 PB.2946.1 chr4 + 3552 24 novel_not_in_catalog HERC6 novel NA NA NA NA no_subtype FALSE canonical NA NA 2697 None 55 0 0 TRUE 0 0 NA B coding 900 2700 222 2921 PB.9160.1 chr17 - 2258 5 full-splice_match LSM12 ENST00000293406.7 2308 5 47 3 no_subtype FALSE canonical NA NA 225 None 7 12 0 FALSE 0 0 NA A coding 195 585 102 686 PB.2173.1 chr3 - 3536 14 full-splice_match PFKFB4 ENST00000232375.7 3586 14 39 11 no_subtype TRUE canonical NA NA 171 None 12 6 0 FALSE 0 0 NA A coding 469 1407 75 1481 PB.2851.1 chr4 + 1668 16 incomplete-splice_match SRP72 ENST00000342756.9 3983 19 693 1622 3prime_fragment FALSE canonical NA NA 1530 None 32 1 0 FALSE 0 0 NA B coding 546 1638 29 1666 PB.2485.1 chr3 + 2681 2 genic PPP2R3A novel NA NA NA NA no_subtype FALSE canonical NA NA 1054 None 2 29 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.6876.2 chr12 - 2009 1 genic_intron novelGene_262 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.132.1 chr1 - 1585 12 novel_not_in_catalog TCEA3 novel NA NA NA NA no_subtype FALSE canonical NA NA 211 None 3 7 0 TRUE 0 0 NA A coding 348 1044 143 1186 PB.6876.1 chr12 - 1450 11 novel_not_in_catalog ITPR2 novel NA NA NA NA no_subtype TRUE canonical NA NA 560 None 2 2 0 TRUE 0 0 NA A coding 327 981 469 1449 PB.1827.1 chr2 + 3472 1 antisense novelGene_FZD5_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1549.2 chr2 + 5475 17 novel_not_in_catalog POLR1B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5042 None 3 17 2 TRUE 0 0 NA B coding 1135 3405 32 3436 PB.10390.1 chr20 + 2698 14 full-splice_match MYBL2 ENST00000217026.4 2639 14 -76 17 no_subtype FALSE canonical NA NA 2177 None 3 2 0 FALSE 0 0 NA A coding 700 2100 204 2303 PB.52.4 chr1 - 1655 6 full-splice_match DFFA ENST00000377038.7 6032 6 46 4331 no_subtype FALSE canonical NA NA 158 None 2 9 0 FALSE 0 0 NA C coding 331 993 23 1015 PB.3133.1 chr4 + 1560 12 novel_not_in_catalog CEP44 novel NA NA NA NA no_subtype FALSE canonical NA NA 1340 None 2 3 0 TRUE 0 0 NA A coding 390 1170 217 1386 PB.3761.1 chr6 + 1595 1 genic_intron novelGene_147 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA A coding 51 153 177 329 PB.1047.1 chr1 + 1630 12 novel_not_in_catalog SMYD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1204 None 5 3 0 TRUE 0 0 NA A coding 349 1047 236 1282 PB.921.2 chr1 - 1622 1 incomplete-splice_match FAM129A ENST00000487074.5 3118 9 1494 3 no_subtype FALSE canonical NA NA NA None 8 1 0 FALSE 0 0 NA B coding 199 597 167 763 PB.8454.1 chr16 + 3799 23 full-splice_match PDXDC1 ENST00000396410.8 4521 23 74 648 no_subtype FALSE canonical NA NA 2130 None 94 21 0 FALSE 0 0 NA C coding 788 2364 24 2387 PB.10125.1 chr19 + 3442 5 full-splice_match ZNF473 ENST00000270617.7 4688 5 78 1168 no_subtype FALSE canonical NA NA 507 None 13 7 0 FALSE 0 0 NA A coding 871 2613 282 2894 PB.326.1 chr1 - 3204 14 full-splice_match SLC6A9 ENST00000372310.7 3130 14 -76 2 no_subtype FALSE canonical NA NA 157 None 2 12 1 FALSE 0 0 NA C coding 633 1899 243 2141 PB.7201.2 chr12 + 3029 9 full-splice_match TDG ENST00000544861.5 1387 9 -19 -1623 no_subtype FALSE canonical NA NA 1159 None 3 7 0 FALSE 0 0 NA C coding 267 801 499 1299 PB.1535.5 chr2 + 1622 10 full-splice_match LIMS1 ENST00000409441.5 1627 10 -14 19 no_subtype FALSE canonical NA NA 1077 None 5 6 0 FALSE 0 0 NA C coding 362 1086 104 1189 PB.2477.1 chr3 - 1445 1 antisense novelGene_CDV3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 35 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5342.1 chr9 - 3196 1 full-splice_match DDX10P2 ENST00000417796.1 2614 1 -79 -503 no_subtype FALSE canonical NA NA NA None 9 7 0 FALSE 0 0 NA C coding 332 996 1524 2519 PB.4437.1 chr7 + 2733 6 full-splice_match CRCP ENST00000395326.7 3009 6 275 1 no_subtype FALSE canonical NA NA 380 None 4 23 0 FALSE 0 0 NA A coding 148 444 84 527 PB.6609.1 chr11 - 2497 1 incomplete-splice_match TMEM123 ENST00000361236.7 3321 4 799 26 no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.281.1 chr1 + 2679 5 full-splice_match AKIRIN1 ENST00000432648.7 2741 5 60 2 no_subtype FALSE canonical NA NA 666 None 25 10 0 FALSE 0 0 NA A coding 192 576 99 674 PB.2679.1 chr3 - 1816 1 novel_in_catalog PPP1R2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9715.1 chr19 + 2784 27 full-splice_match VAV1 ENST00000602142.5 2620 27 85 -249 no_subtype FALSE canonical NA NA 2481 None 29 2 1 FALSE 0 0 NA C coding 780 2340 193 2532 PB.9715.3 chr19 + 2805 26 full-splice_match VAV1 ENST00000304076.6 2825 26 12 8 no_subtype FALSE canonical NA NA 2500 None 3 2 0 FALSE 0 0 NA C coding 823 2469 83 2551 PB.4874.1 chr8 - 1942 4 full-splice_match BRF2 ENST00000220659.10 2603 4 41 620 no_subtype FALSE canonical NA NA 234 None 7 2 0 FALSE 0 0 NA A coding 419 1257 81 1337 PB.4732.1 chr7 - 2910 4 full-splice_match ZNF786 ENST00000491431.1 2874 4 -44 8 no_subtype FALSE canonical NA NA 127 None 4 5 0 FALSE 0 0 NA A coding 782 2346 110 2455 PB.8209.3 chr15 - 1321 9 full-splice_match SCAMP2 ENST00000268099.13 2453 9 0 1132 no_subtype FALSE canonical NA NA 167 None 36 4 0 FALSE 0 0 NA A coding 329 987 111 1097 PB.7609.1 chr14 - 3076 1 antisense novelGene_TRAJ32_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2443.2 chr3 - 2801 9 full-splice_match ZNF148 ENST00000360647.8 9651 9 65 6785 no_subtype FALSE canonical NA NA 188 None 179 1 0 FALSE 0 0 NA C coding 793 2379 422 2800 PB.7609.2 chr14 - 1388 2 genic DAD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1109 None 2 3 0 TRUE 0 0 NA A coding 113 339 30 368 PB.2523.1 chr3 - 3868 21 novel_not_in_catalog CP novel NA NA NA NA no_subtype FALSE canonical NA NA 183 None 2 3 0 FALSE 0 0 NA A coding 1090 3270 38 3307 PB.1501.2 chr2 + 1093 6 full-splice_match UNC50 ENST00000357765.6 1143 6 47 3 no_subtype FALSE canonical NA NA 748 None 4 2 0 FALSE 0 0 NA C coding 259 777 106 882 PB.310.1 chr1 - 1228 9 full-splice_match EBNA1BP2 ENST00000236051.2 1322 9 -34 128 no_subtype FALSE canonical NA NA 242 None 3 0 0 FALSE 0 0 NA A coding 306 918 177 1094 PB.1501.4 chr2 + 1644 7 novel_not_in_catalog UNC50 novel NA NA NA NA no_subtype FALSE canonical NA NA 707 None 2 18 1 TRUE 0 0 NA C coding 259 777 65 841 PB.6924.1 chr12 + 3472 1 antisense novelGene_PCED1B-AS1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10398.1 chr20 - 1932 10 full-splice_match SERINC3 ENST00000342374.4 4445 10 25 2488 no_subtype FALSE canonical NA NA 172 None 69 0 0 FALSE 0 0 NA C coding 473 1419 134 1552 PB.9638.3 chr19 - 1876 13 novel_not_in_catalog POLR2E novel NA NA NA NA no_subtype TRUE non_canonical NA NA 116 None 5 22 5 TRUE 0 0 NA C coding 210 630 60 689 PB.10421.4 chr20 - 3240 8 novel_not_in_catalog NCOA5 novel NA NA NA NA no_subtype FALSE canonical NA NA 146 None 4 9 1 FALSE 0 0 NA C coding 406 1218 176 1393 PB.10398.2 chr20 - 1558 1 incomplete-splice_match SERINC3 ENST00000342374.4 4445 10 2872 16 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10681.3 chr22 - 2654 13 novel_not_in_catalog PITPNB novel NA NA NA NA no_subtype FALSE canonical NA NA 61 None 156 5 0 TRUE 0 0 NA B coding 271 813 42 854 PB.10681.1 chr22 - 2813 12 novel_not_in_catalog PITPNB novel NA NA NA NA no_subtype TRUE canonical NA NA 73 None 36 5 0 TRUE 0 0 NA B coding 272 816 54 869 PB.9709.2 chr19 - 3401 11 novel_not_in_catalog SLC25A23 novel NA NA NA NA no_subtype FALSE canonical NA NA 47 None 2 17 1 TRUE 0 0 NA B coding 468 1404 89 1492 PB.1682.1 chr2 + 1444 14 full-splice_match PPIG ENST00000260970.7 6368 14 29 4895 no_subtype FALSE canonical NA NA 1345 None 4 1 0 FALSE 0 0 NA C coding 417 1251 192 1442 PB.10192.1 chr19 - 2543 6 novel_not_in_catalog ZNF671 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 231 None 2 10 2 TRUE 0 0 NA C coding 457 1371 444 1814 PB.9709.1 chr19 - 3382 11 novel_not_in_catalog SLC25A23 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 54 None 3 16 0 TRUE 0 0 NA B coding 468 1404 68 1471 PB.4888.2 chr8 + 4030 23 novel_not_in_catalog ADAM9 novel NA NA NA NA no_subtype FALSE canonical NA NA 2645 None 2 18 2 TRUE 0 0 NA B coding 737 2211 276 2486 PB.4888.1 chr8 + 3829 24 novel_not_in_catalog ADAM9 novel NA NA NA NA no_subtype TRUE canonical NA NA 2444 None 44 13 1 TRUE 0 0 NA B coding 737 2211 75 2285 PB.707.8 chr1 - 4267 10 novel_not_in_catalog ADAR novel NA NA NA NA no_subtype FALSE canonical NA NA 125 None 2 15 1 FALSE 0 0 NA B coding 424 1272 259 1530 PB.3511.1 chr5 - 1666 14 novel_not_in_catalog SIL1 novel NA NA NA NA no_subtype TRUE canonical NA NA 144 None 29 0 0 TRUE 0 0 NA A coding 461 1383 155 1537 PB.2050.1 chr3 + 3571 1 genic_intron novelGene_218 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9787.1 chr19 + 4430 4 full-splice_match ZNF441 ENST00000357901.4 4356 4 -96 22 no_subtype FALSE canonical NA NA 392 None 2 25 0 FALSE 0 0 NA A coding 693 2079 199 2277 PB.10163.4 chr19 + 1509 5 novel_not_in_catalog RPS9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 874 None 2 3 1 TRUE 0 0 NA B coding 139 417 29 445 PB.6206.1 chr11 - 2616 3 full-splice_match ZBED5 ENST00000526020.5 1512 3 714 -1818 no_subtype FALSE canonical NA NA 221 None 7 4 0 FALSE 0 0 NA C coding 658 1974 577 2550 PB.1726.2 chr2 + 1913 16 full-splice_match ITGA4 ENST00000233573.6 2070 16 124 33 no_subtype FALSE canonical NA NA 1798 None 2 0 0 FALSE 0 0 NA C coding 583 1749 164 1912 PB.1726.1 chr2 + 3391 28 full-splice_match ITGA4 ENST00000397033.6 4189 28 182 616 no_subtype FALSE canonical NA NA 3251 None 7 1 0 FALSE 0 0 NA C coding 1012 3036 309 3344 PB.9366.5 chr17 - 2953 5 novel_not_in_catalog GRB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 90 None 6 14 0 FALSE 0 0 NA C coding 163 489 175 663 PB.3696.4 chr5 - 4404 22 novel_not_in_catalog TBC1D9B novel NA NA NA NA no_subtype FALSE canonical NA NA 127 None 24 7 2 TRUE 0 0 NA B coding 1233 3699 10 3708 PB.6974.3 chr12 - 2640 18 novel_not_in_catalog SLC11A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 37 None 2 3 0 FALSE 0 0 NA C coding 568 1704 228 1931 PB.6740.1 chr11 + 3090 19 full-splice_match ST14 ENST00000278742.5 3539 19 433 16 no_subtype FALSE canonical NA NA 2391 None 2 7 0 FALSE 0 0 NA A coding 762 2286 265 2550 PB.6985.5 chr12 + 3337 11 novel_in_catalog EIF4B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1280 None 4 17 0 FALSE 0 0 NA C coding 363 1089 270 1358 PB.4207.4 chr6 - 2751 2 novel_not_in_catalog IPCEF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1282 None 2 26 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.326.2 chr1 - 3006 13 novel_in_catalog SLC6A9 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 117 None 2 7 1 FALSE 0 0 NA C coding 568 1704 241 1944 PB.6985.1 chr12 + 3832 15 full-splice_match EIF4B ENST00000262056.13 4148 15 316 0 no_subtype FALSE canonical NA NA 1765 None 199 17 0 FALSE 0 0 NA C coding 611 1833 11 1843 PB.10479.1 chr20 + 4300 6 novel_not_in_catalog GID8 novel NA NA NA NA no_subtype FALSE canonical NA NA 3013 None 9 20 1 TRUE 0 0 NA C coding 228 684 137 820 PB.7613.1 chr14 + 3675 10 full-splice_match MMP14 ENST00000311852.10 3732 10 51 6 no_subtype TRUE canonical NA NA 1627 None 43 11 0 FALSE 0 0 NA A coding 582 1746 211 1956 PB.2265.4 chr3 + 1179 3 genic_intron novelGene_559 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 982 None 2 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4332.1 chr7 - 2768 1 incomplete-splice_match OSBPL3 ENST00000313367.6 6760 23 3988 5 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2757.1 chr4 - 3919 26 novel_in_catalog PROM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 46 None 2 10 1 FALSE 0 0 NA B coding 833 2499 259 2757 PB.3144.4 chr4 - 2769 9 novel_not_in_catalog CASP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 68 None 6 20 0 FALSE 0 0 NA B coding 277 831 373 1203 PB.710.1 chr1 - 3167 3 full-splice_match PYGO2 ENST00000368457.2 3146 3 -34 13 no_subtype FALSE canonical NA NA 309 None 58 15 0 FALSE 0 0 NA C coding 406 1218 207 1424 PB.996.1 chr1 - 5469 8 novel_not_in_catalog NUAK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 351 None 2 33 1 TRUE 0 0 NA B coding 628 1884 121 2004 PB.9701.1 chr19 - 3085 19 novel_not_in_catalog LONP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 442 None 14 1 0 TRUE 0 0 NA A coding 845 2535 356 2890 PB.3108.1 chr4 - 3567 4 incomplete-splice_match FAM198B ENST00000585682.5 4900 5 1064 269 5prime_fragment FALSE canonical NA NA 253 None 2 10 0 FALSE 0 0 NA A coding 296 888 13 900 PB.4880.1 chr8 - 2725 2 genic PLPP5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2642 None 4 16 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.4236.1 chr6 + 1433 9 full-splice_match ACAT2 ENST00000367048.4 3180 9 1738 9 no_subtype FALSE canonical NA NA 1045 None 27 2 0 FALSE 0 0 NA A coding 397 1191 23 1213 PB.2443.1 chr3 - 2796 1 incomplete-splice_match ZNF148 ENST00000360647.8 9651 9 3191 3665 no_subtype FALSE canonical NA NA NA None 5 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7924.1 chr14 + 3796 4 full-splice_match MEG3 ENST00000398461.5 3452 4 -348 4 no_subtype FALSE canonical NA NA 3469 None 2 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1285.1 chr2 - 2615 13 full-splice_match HNRNPLL ENST00000608859.5 3035 13 90 330 no_subtype FALSE canonical NA NA 509 None 10 6 0 FALSE 0 0 NA A coding 542 1626 321 1946 PB.7950.1 chr14 + 4680 24 novel_not_in_catalog INF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3875 None 9 7 3 TRUE 0 0 NA B coding 872 2616 148 2763 PB.2757.5 chr4 - 2864 2 genic_intron novelGene_138 novel NA NA NA NA no_subtype FALSE canonical NA NA 627 None 2 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5479.1 chr9 - 995 8 full-splice_match RAB14 ENST00000373840.8 4145 8 -6 3156 no_subtype FALSE canonical NA NA 237 None 206 1 0 FALSE 0 0 NA C coding 215 645 245 889 PB.1535.1 chr2 + 1592 10 full-splice_match LIMS1 ENST00000544547.5 4461 10 61 2808 no_subtype FALSE canonical NA NA 1046 None 12 7 0 FALSE 0 0 NA C coding 337 1011 148 1158 PB.5479.3 chr9 - 2884 9 novel_not_in_catalog RAB14 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 151 None 2 36 4 TRUE 0 0 NA C coding 127 381 411 791 PB.5693.1 chr10 + 2851 1 intergenic novelGene_141 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 29 0 FALSE 0 0 NA A coding 163 489 169 657 PB.8388.1 chr16 + 1901 15 novel_not_in_catalog PDPK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1646 None 10 1 0 TRUE 0 0 NA B coding 556 1668 93 1760 PB.8388.2 chr16 + 7199 18 novel_not_in_catalog PDPK1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 7050 None 4 55 0 TRUE 0 0 NA B coding 556 1668 131 1798 PB.8388.3 chr16 + 2730 4 genic PDPK1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2577 None 6 26 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.594.1 chr1 - 3214 8 full-splice_match TSPAN2 ENST00000369516.6 3177 8 -42 5 no_subtype FALSE canonical NA NA 143 None 21 19 0 FALSE 0 0 NA A coding 221 663 75 737 PB.5084.5 chr8 - 2807 13 novel_in_catalog TAF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1165 None 2 15 0 FALSE 0 0 NA B coding 424 1272 1535 2806 PB.2265.3 chr3 + 5581 28 novel_not_in_catalog FLNB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4705 None 2 6 1 TRUE 0 0 NA B coding 1111 3333 794 4126 PB.10192.2 chr19 - 2870 4 full-splice_match ZNF671 ENST00000600125.5 2903 4 28 5 no_subtype FALSE canonical NA NA 678 None 4 9 0 FALSE 0 0 NA C coding 457 1371 772 2142 PB.10838.10 chr22 + 1736 9 novel_in_catalog TRABD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1372 None 3 5 0 FALSE 0 0 NA C coding 392 1176 369 1544 PB.5084.2 chr8 - 3734 28 novel_not_in_catalog TAF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 360 None 11 3 0 TRUE 0 0 NA B coding 1152 3456 278 3733 PB.5084.3 chr8 - 3755 29 novel_not_in_catalog TAF2 novel NA NA NA NA no_subtype TRUE canonical NA NA 360 None 2 10 4 TRUE 0 0 NA B coding 907 2721 278 2998 PB.1992.1 chr3 - 1524 8 full-splice_match EMC3 ENST00000245046.6 2777 8 292 961 no_subtype FALSE canonical NA NA 322 None 9 3 0 FALSE 0 0 NA A coding 261 783 168 950 PB.1776.2 chr2 - 3687 6 novel_not_in_catalog AC013264.1 novel NA NA NA NA no_subtype TRUE canonical NA NA 241 None 3 18 3 TRUE 0 0 NA B coding 65 195 215 409 PB.1776.3 chr2 - 2532 1 genic_intron novelGene_1365 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9275.2 chr17 - 3041 3 novel_not_in_catalog HEATR6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 228 None 2 12 1 TRUE 0 0 NA C coding 120 360 10 369 PB.1776.5 chr2 - 2783 1 genic_intron novelGene_1366 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9275.1 chr17 - 3916 20 full-splice_match HEATR6 ENST00000184956.10 3932 20 7 9 no_subtype FALSE canonical NA NA 229 None 20 5 0 FALSE 0 0 NA C coding 1181 3543 11 3553 PB.6329.3 chr11 - 2139 15 incomplete-splice_match SSRP1 ENST00000278412.6 2819 17 -4 684 internal_fragment FALSE canonical NA NA 152 None 2 8 0 FALSE 0 0 NA C coding 622 1866 272 2137 PB.1834.1 chr2 + 3264 6 full-splice_match RPE ENST00000359429.10 2569 6 60 -755 no_subtype FALSE canonical NA NA 601 None 8 28 0 FALSE 0 0 NA A coding 228 684 38 721 PB.7629.3 chr14 + 3379 21 full-splice_match RNF31 ENST00000324103.10 3627 21 241 7 no_subtype FALSE canonical NA NA 3244 None 10 7 0 FALSE 0 0 NA C coding 1072 3216 80 3295 PB.7629.2 chr14 + 3370 22 novel_in_catalog RNF31 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3233 None 2 1 0 FALSE 0 0 NA C coding 1072 3216 69 3284 PB.7629.1 chr14 + 3335 22 novel_in_catalog RNF31 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical NA NA 3203 None 2 1 0 FALSE 0 0 NA C coding 1072 3216 39 3254 PB.6329.2 chr11 - 2692 17 novel_not_in_catalog SSRP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 29 None 2 2 0 FALSE 0 0 NA C coding 709 2127 149 2275 PB.10137.2 chr19 - 2941 10 full-splice_match SIGLEC10 ENST00000353836.9 3109 10 161 7 no_subtype FALSE canonical NA NA 98 None 6 16 0 FALSE 0 0 NA C coding 602 1806 62 1867 PB.10137.3 chr19 - 3371 10 novel_in_catalog SIGLEC10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 98 None 2 23 0 FALSE 0 0 NA C coding 470 1410 885 2294 PB.5702.1 chr10 - 1943 1 genic_intron novelGene_172 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10137.1 chr19 - 3229 11 full-splice_match SIGLEC10 ENST00000339313.9 2256 11 56 -1029 no_subtype TRUE canonical NA NA 98 None 6 16 0 FALSE 0 0 NA C coding 697 2091 62 2152 PB.3172.1 chr5 + 3395 18 novel_not_in_catalog MTRR novel NA NA NA NA no_subtype TRUE canonical NA NA 2186 None 2 9 0 TRUE 0 0 NA B coding 711 2133 196 2328 PB.3172.2 chr5 + 3241 17 novel_not_in_catalog MTRR novel NA NA NA NA no_subtype FALSE canonical NA NA 2044 None 6 9 0 TRUE 0 0 NA B coding 157 471 1716 2186 PB.3172.3 chr5 + 3244 19 novel_not_in_catalog MTRR novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2033 None 2 21 5 TRUE 0 0 NA B coding 579 1737 439 2175 PB.3172.4 chr5 + 3343 18 novel_not_in_catalog MTRR novel NA NA NA NA no_subtype FALSE canonical NA NA 2147 None 34 9 0 TRUE 0 0 NA B coding 711 2133 157 2289 PB.6999.1 chr12 - 2796 1 antisense novelGene_PCBP2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10024.2 chr19 - 1945 6 novel_not_in_catalog DEDD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 92 None 19 4 0 TRUE 0 0 NA B coding 326 978 131 1108 PB.10024.1 chr19 - 1541 5 novel_not_in_catalog DEDD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 51 None 12 4 0 TRUE 0 0 NA B coding 13 39 663 701 PB.9482.1 chr18 + 2556 1 novel_in_catalog RAB31 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9269.1 chr17 + 1313 1 incomplete-splice_match YPEL2 ENST00000582192.1 3193 2 1878 3 no_subtype FALSE canonical NA NA NA None 4 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11144.2 chrX + 5942 34 novel_in_catalog STAG2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4022 None 2 3 0 FALSE 0 0 NA C coding 1268 3804 240 4043 PB.1299.1 chr2 - 1521 1 full-splice_match OXER1 ENST00000378661.3 1781 1 233 27 no_subtype FALSE canonical NA NA NA None 25 1 0 FALSE 0 0 NA C coding 253 759 360 1118 PB.1299.2 chr2 - 1496 2 novel_not_in_catalog OXER1 novel NA NA NA NA no_subtype FALSE canonical NA NA 522 None 4 1 0 FALSE 0 0 NA C coding 130 390 686 1075 PB.11152.7 chrX - 4147 9 full-splice_match ELF4 ENST00000308167.9 4165 9 10 8 no_subtype FALSE canonical NA NA 161 None 4 9 0 FALSE 0 0 NA C coding 663 1989 371 2359 PB.8341.11 chr16 + 3456 11 novel_not_in_catalog FAM234A novel NA NA NA NA no_subtype FALSE canonical NA NA 2155 None 5 19 1 TRUE 0 0 NA C coding 221 663 1702 2364 PB.8341.10 chr16 + 3029 11 novel_in_catalog FAM234A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1722 None 105 20 0 FALSE 0 0 NA C coding 472 1416 516 1931 PB.920.1 chr1 - 3683 15 novel_not_in_catalog FAM129A novel NA NA NA NA no_subtype FALSE canonical NA NA 99 None 86 1 0 TRUE 0 0 NA B coding 928 2784 45 2828 PB.8341.12 chr16 + 3949 11 novel_not_in_catalog FAM234A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2642 None 2 24 1 TRUE 0 0 NA C coding 221 663 2189 2851 PB.2020.2 chr3 - 2684 1 antisense novelGene_SLC6A6_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2752.1 chr4 + 3419 1 novel_in_catalog C1QTNF7 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10890.1 chrX + 2886 1 genic_intron novelGene_183 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA A coding 102 306 521 826 PB.2443.4 chr3 - 2787 9 novel_not_in_catalog ZNF148 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 167 None 2 0 0 FALSE 0 0 NA C coding 793 2379 407 2785 PB.1558.7 chr2 + 3135 2 incomplete-splice_match ACTR3 ENST00000478928.1 5965 3 3624 -794 internal_fragment FALSE canonical NA NA 1111 None 4 21 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.867.1 chr1 + 5613 25 novel_not_in_catalog SUCO novel NA NA NA NA no_subtype FALSE canonical NA NA 3602 None 2 8 0 TRUE 0 0 NA A coding 1254 3762 282 4043 PB.5948.1 chr10 - 4398 34 full-splice_match RRP12 ENST00000370992.8 4425 34 24 3 no_subtype FALSE canonical NA NA 254 None 17 6 0 FALSE 0 0 NA A coding 1297 3891 116 4006 PB.10443.1 chr20 + 2882 5 novel_not_in_catalog PARD6B novel NA NA NA NA no_subtype TRUE canonical NA NA 2197 None 4 11 1 TRUE 0 0 NA A coding 372 1116 247 1362 PB.6423.3 chr11 + 3438 8 novel_in_catalog VPS51 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3057 None 2 16 1 FALSE 0 0 NA C coding 536 1608 47 1654 PB.6180.2 chr11 - 1382 1 novel_in_catalog MRPL17 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 2 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.158.1 chr1 + 2863 1 genic_intron novelGene_249 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1535.2 chr2 + 3324 11 novel_not_in_catalog LIMS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3275 None 3 17 0 TRUE 0 0 NA C coding 337 1011 148 1158 PB.5843.2 chr10 - 1392 5 full-splice_match DNAJC9 ENST00000372950.4 3032 5 1607 33 no_subtype FALSE canonical NA NA 246 None 5 3 0 FALSE 0 0 NA C coding 260 780 67 846 PB.5843.1 chr10 - 1637 5 novel_not_in_catalog DNAJC9 novel NA NA NA NA no_subtype FALSE canonical NA NA 267 None 2 8 0 FALSE 0 0 NA C coding 232 696 88 783 PB.9632.1 chr19 - 1754 8 full-splice_match R3HDM4 ENST00000361574.9 1815 8 60 1 no_subtype TRUE canonical NA NA 85 None 2 7 0 FALSE 0 0 NA C coding 268 804 15 818 PB.998.1 chr1 + 3689 10 full-splice_match MFSD4A ENST00000367147.8 4095 10 45 361 no_subtype FALSE canonical NA NA 1537 None 2 14 0 FALSE 0 0 NA C coding 514 1542 49 1590 PB.3489.1 chr5 + 3860 23 full-splice_match SEC24A ENST00000398844.6 6299 23 42 2397 no_subtype FALSE canonical NA NA 3413 None 20 3 0 FALSE 0 0 NA A coding 1093 3279 247 3525 PB.9763.1 chr19 - 1220 2 full-splice_match CDKN2D ENST00000393599.2 1422 2 194 8 no_subtype FALSE canonical NA NA 272 None 11 6 0 FALSE 0 0 NA A coding 166 498 132 629 PB.10880.1 chrX + 2539 19 novel_not_in_catalog BMX novel NA NA NA NA no_subtype FALSE canonical NA NA 2102 None 2 2 0 FALSE 0 0 NA A coding 674 2022 153 2174 PB.11006.1 chrX + 1601 1 incomplete-splice_match MSN ENST00000360270.6 3944 13 2341 3 no_subtype FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA B coding 99 297 675 971 PB.5942.1 chr10 + 658 1 full-splice_match RPL13AP5 ENST00000439189.1 612 1 -22 -24 no_subtype FALSE canonical NA NA NA None 2 0 0 FALSE 0 0 NA A coding 203 609 23 631 PB.2396.1 chr3 - 1093 2 genic_intron novelGene_1033 novel NA NA NA NA no_subtype FALSE canonical NA NA 134 None 3 6 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8813.1 chr16 + 1536 10 full-splice_match DPEP1 ENST00000261615.5 1592 10 28 28 no_subtype FALSE canonical NA NA 1159 None 5 4 0 FALSE 0 0 NA A coding 411 1233 95 1327 PB.5564.1 chr9 - 2303 6 full-splice_match ASB6 ENST00000277458.4 2330 6 24 3 no_subtype FALSE canonical NA NA 255 None 2 10 0 FALSE 0 0 NA C coding 421 1263 143 1405 PB.9081.1 chr17 - 2787 11 novel_not_in_catalog HNF1B novel NA NA NA NA no_subtype FALSE canonical NA NA 524 None 6 2 0 TRUE 0 0 NA A coding 557 1671 181 1851 PB.1548.1 chr2 - 2634 5 genic_intron novelGene_997 novel NA NA NA NA no_subtype TRUE canonical NA NA 129 None 2 24 3 FALSE 0 0 NA A coding 116 348 485 832 PB.336.1 chr1 + 1186 10 full-splice_match UROD ENST00000246337.8 1300 10 105 9 no_subtype FALSE canonical NA NA 956 None 8 1 0 FALSE 0 0 NA C coding 367 1101 15 1115 PB.10273.1 chr20 - 2514 6 full-splice_match MKKS ENST00000347364.7 6714 6 13 4187 no_subtype FALSE canonical NA NA 102 None 6 2 0 FALSE 0 0 NA C coding 570 1710 751 2460 PB.9616.2 chr18 + 4001 33 novel_not_in_catalog ATP9B novel NA NA NA NA no_subtype TRUE canonical NA NA 3734 None 4 14 5 TRUE 0 0 NA B coding 1256 3768 28 3795 PB.9964.1 chr19 + 2780 5 full-splice_match ZNF527 ENST00000436120.6 2828 5 41 7 no_subtype FALSE canonical NA NA 322 None 2 9 1 FALSE 0 0 NA A coding 609 1827 67 1893 PB.10273.2 chr20 - 2867 2 novel_in_catalog MKKS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 233 None 4 9 0 FALSE 0 0 NA C coding 359 1077 651 1727 PB.6288.2 chr11 + 3746 14 novel_not_in_catalog EXT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2140 None 7 11 0 TRUE 0 0 NA B coding 673 2019 206 2224 PB.6288.1 chr11 + 3387 16 novel_not_in_catalog EXT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2180 None 109 2 0 TRUE 0 0 NA B coding 673 2019 156 2174 PB.2487.1 chr3 + 1784 15 full-splice_match PCCB ENST00000251654.8 1833 15 46 3 no_subtype FALSE canonical NA NA 1522 None 15 2 0 FALSE 0 0 NA A coding 539 1617 25 1641 PB.8020.1 chr15 - 3183 19 novel_in_catalog PLA2G4F novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 158 None 4 8 0 FALSE 0 0 NA C coding 739 2217 48 2264 PB.7635.1 chr14 - 1388 9 novel_not_in_catalog DHRS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 166 None 27 1 1 FALSE 0 0 NA B coding 313 939 191 1129 PB.7635.2 chr14 - 1629 8 novel_not_in_catalog DHRS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 85 None 2 16 1 FALSE 0 0 NA B coding 177 531 110 640 PB.8020.2 chr15 - 3413 20 full-splice_match PLA2G4F ENST00000397272.7 5587 20 0 2174 no_subtype FALSE canonical NA NA 198 None 2 4 0 FALSE 0 0 NA C coding 849 2547 88 2634 PB.10921.3 chrX + 5536 29 incomplete-splice_match USP9X ENST00000378308.6 8371 45 2985 -150 internal_fragment FALSE canonical NA NA 5175 None 2 0 0 FALSE 0 0 NA B coding 1705 5115 196 5310 PB.10921.2 chrX + 3168 1 genic_intron novelGene_409 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10921.1 chrX + 5819 30 novel_not_in_catalog USP9X novel NA NA NA NA no_subtype FALSE canonical NA NA 5165 None 2 11 0 FALSE 0 0 NA B coding 1543 4629 771 5399 PB.9452.2 chr17 - 1770 10 full-splice_match CSNK1D ENST00000392334.6 2047 10 266 11 no_subtype TRUE canonical NA NA 126 None 74 1 0 FALSE 0 0 NA C coding 409 1227 51 1277 PB.9452.4 chr17 - 2006 10 novel_not_in_catalog CSNK1D novel NA NA NA NA no_subtype FALSE non_canonical NA NA 395 None 2 4 1 TRUE 0 0 NA C coding 439 1317 320 1636 PB.5779.1 chr10 - 2812 1 full-splice_match RP11-50E11.2 ENST00000437111.1 1544 1 -249 -1019 no_subtype FALSE canonical NA NA NA None 19 20 0 FALSE 0 0 NA A coding 161 483 1094 1576 PB.10921.4 chrX + 2710 2 novel_not_in_catalog USP9X novel NA NA NA NA no_subtype FALSE canonical NA NA 2496 None 2 21 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.1339.2 chr2 + 2793 3 novel_not_in_catalog RPS27A novel NA NA NA NA no_subtype FALSE canonical NA NA 1509 None 4 37 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.1339.1 chr2 + 527 6 full-splice_match RPS27A ENST00000272317.10 1071 6 286 258 no_subtype FALSE canonical NA NA 359 None 9 0 0 FALSE 0 0 NA C coding 156 468 39 506 PB.2889.1 chr4 - 1606 1 genic_intron novelGene_714 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8310.1 chr15 + 1626 2 full-splice_match CHD2 ENST00000627622.1 1740 2 3 111 no_subtype FALSE canonical NA NA 501 None 2 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10568.1 chr21 + 1376 5 full-splice_match WRB ENST00000333781.9 1616 5 135 105 no_subtype FALSE canonical NA NA 457 None 12 7 0 FALSE 0 0 NA A coding 174 522 7 528 PB.6695.1 chr11 - 5462 4 genic NECTIN1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 68 None 20 29 2 TRUE 0 0 NA C coding 198 594 1925 2518 PB.5659.4 chr10 - 3443 1 novel_in_catalog GDI2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 36 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4696.1 chr7 - 3117 1 full-splice_match LUZP6 ENST00000589735.1 177 1 -2431 -509 no_subtype FALSE canonical NA NA NA None 9 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1063.1 chr1 - 1629 1 antisense novelGene_MIA3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4287.1 chr7 + 1587 1 incomplete-splice_match RAC1 ENST00000348035.8 2323 6 722 15 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A coding 113 339 55 393 PB.160.1 chr1 + 1929 7 full-splice_match MTFR1L ENST00000374303.6 2004 7 74 1 no_subtype FALSE canonical NA NA 909 None 7 3 0 FALSE 0 0 NA C coding 292 876 137 1012 PB.8336.2 chr15 - 3116 21 novel_not_in_catalog TARSL2 novel NA NA NA NA no_subtype TRUE canonical NA NA 364 None 4 7 1 TRUE 0 0 NA A coding 802 2406 68 2473 PB.160.3 chr1 + 1809 8 novel_not_in_catalog MTFR1L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 790 None 2 5 2 TRUE 0 0 NA C coding 210 630 112 741 PB.160.2 chr1 + 1931 7 full-splice_match MTFR1L ENST00000374303.6 2004 7 68 5 no_subtype FALSE canonical NA NA 915 None 13 2 0 FALSE 0 0 NA C coding 292 876 143 1018 PB.10946.2 chrX - 3811 6 novel_not_in_catalog ZNF182 novel NA NA NA NA no_subtype FALSE canonical NA NA 467 None 2 16 2 TRUE 0 0 NA B coding 662 1986 512 2497 PB.10946.3 chrX - 3744 6 novel_not_in_catalog ZNF182 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 412 None 2 19 2 TRUE 0 0 NA B coding 521 1563 872 2434 PB.10946.1 chrX - 3473 7 novel_not_in_catalog ZNF182 novel NA NA NA NA no_subtype FALSE canonical NA NA 58 None 3 10 1 TRUE 0 0 NA B coding 620 1860 298 2157 PB.4933.4 chr8 - 5554 2 genic_intron novelGene_545 novel NA NA NA NA no_subtype TRUE canonical NA NA 54 None 3 26 0 FALSE 0 0 NA A coding 167 501 1491 1991 PB.10946.4 chrX - 3668 6 novel_not_in_catalog ZNF182 novel NA NA NA NA no_subtype FALSE canonical NA NA 460 None 2 7 0 TRUE 0 0 NA B coding 620 1860 505 2364 PB.4418.4 chr7 + 3621 10 novel_not_in_catalog IKZF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 983 None 19 6 0 TRUE 0 0 NA B coding 519 1557 134 1690 PB.7088.3 chr12 + 1747 1 incomplete-splice_match RASSF3 ENST00000542104.5 3492 5 1744 2 no_subtype FALSE canonical NA NA NA None 21 10 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8295.1 chr15 + 2829 1 genic_intron novelGene_829 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A coding 106 318 2218 2535 PB.3150.1 chr4 + 1900 1 genic_intron novelGene_1346 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.573.10 chr1 + 3354 4 novel_not_in_catalog CAPZA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2279 None 5 29 3 TRUE 0 0 NA B non_coding NA NA NA NA PB.636.2 chr1 - 3916 2 genic_intron novelGene_1227 novel NA NA NA NA no_subtype FALSE canonical NA NA 2004 None 2 23 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.140.1 chr1 - 1802 8 full-splice_match FUCA1 ENST00000374479.3 2047 8 200 45 no_subtype FALSE canonical NA NA 197 None 70 4 0 FALSE 0 0 NA A coding 374 1122 85 1206 PB.6689.1 chr11 + 2282 1 incomplete-splice_match CBL ENST00000264033.5 11231 16 7735 1215 no_subtype FALSE canonical NA NA NA None 29 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7505.1 chr13 + 3972 2 full-splice_match ALG11 ENST00000523764.1 1404 2 -11 -2557 no_subtype FALSE canonical NA NA 76 None 2 14 0 FALSE 0 0 NA A coding 766 2298 563 2860 PB.9648.3 chr19 + 1555 5 incomplete-splice_match CSNK1G2 ENST00000255641.12 2918 12 1335 28 internal_fragment FALSE canonical NA NA 393 None 4 13 0 FALSE 0 0 NA B coding 129 387 59 445 PB.4362.2 chr7 - 1726 13 novel_not_in_catalog NT5C3A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 38 None 8 13 2 TRUE 0 0 NA C coding 285 855 272 1126 PB.9648.1 chr19 + 2644 11 incomplete-splice_match CSNK1G2 ENST00000255641.12 2918 12 270 4 internal_fragment TRUE canonical NA NA 1458 None 2 20 0 FALSE 0 0 NA B coding 415 1245 266 1510 PB.573.12 chr1 + 831 1 incomplete-splice_match CAPZA1 ENST00000263168.3 3020 10 2180 10 no_subtype FALSE canonical NA NA NA None 17 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5771.2 chr10 - 1518 6 full-splice_match C10orf128 ENST00000474718.5 614 6 -29 -875 no_subtype FALSE canonical NA NA 95 None 7 7 0 FALSE 0 0 NA C coding 105 315 53 367 PB.5771.1 chr10 - 1475 5 novel_in_catalog C10orf128 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 77 None 3 5 0 FALSE 0 0 NA C coding 91 273 35 307 PB.8449.1 chr16 + 3214 1 incomplete-splice_match MKL2 ENST00000572588.1 7897 5 4676 8 no_subtype FALSE canonical NA NA NA None 4 13 0 FALSE 0 0 NA B coding 104 312 2146 2457 PB.6607.4 chr11 + 1013 2 incomplete-splice_match BIRC3 ENST00000263464.7 5197 9 5 4179 3prime_fragment FALSE canonical NA NA 72 None 2 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9628.1 chr19 + 2897 5 novel_not_in_catalog MISP novel NA NA NA NA no_subtype FALSE canonical NA NA 2084 None 78 5 0 FALSE 0 0 NA C coding 679 2037 135 2171 PB.9628.2 chr19 + 2847 5 full-splice_match MISP ENST00000215582.7 2871 5 14 10 no_subtype FALSE canonical NA NA 2039 None 66 3 0 FALSE 0 0 NA C coding 679 2037 90 2126 PB.9628.3 chr19 + 2824 4 novel_in_catalog MISP novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2001 None 7 4 0 FALSE 0 0 NA C coding 666 1998 91 2088 PB.2205.8 chr3 + 2945 23 novel_in_catalog RBM5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2321 None 2 3 0 FALSE 0 0 NA C coding 272 816 1629 2444 PB.6607.2 chr11 + 5639 10 novel_not_in_catalog BIRC3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4827 None 2 53 3 TRUE 0 0 NA C coding 528 1584 2761 4344 PB.10852.1 chrX + 1164 10 full-splice_match CD99 ENST00000624481.4 1089 10 -63 -12 no_subtype FALSE canonical NA NA 640 None 15 8 0 FALSE 0 0 NA C coding 184 552 112 663 PB.9095.2 chr17 - 2643 8 full-splice_match PGAP3 ENST00000300658.8 2737 8 85 9 no_subtype FALSE canonical NA NA 189 None 18 8 0 FALSE 0 0 NA A coding 320 960 9 968 PB.3412.1 chr5 + 2706 11 full-splice_match CAMK4 ENST00000282356.8 12240 11 345 9189 no_subtype FALSE canonical NA NA 1034 None 37 9 0 FALSE 0 0 NA A coding 473 1419 54 1472 PB.2205.9 chr3 + 3062 25 novel_not_in_catalog RBM5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2430 None 3 10 3 TRUE 0 0 NA C coding 801 2403 151 2553 PB.300.1 chr1 - 2687 1 incomplete-splice_match HIVEP3 ENST00000372583.5 12193 9 9239 268 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10852.2 chrX + 2745 9 full-splice_match CD99 ENST00000482405.7 842 9 21 -1924 no_subtype FALSE canonical NA NA 505 None 42 25 1 FALSE 0 0 NA C coding 160 480 31 510 PB.8048.1 chr15 - 1940 9 full-splice_match MFAP1 ENST00000267812.3 2155 9 119 96 no_subtype FALSE canonical NA NA 193 None 6 1 0 FALSE 0 0 NA A coding 439 1317 115 1431 PB.3412.4 chr5 + 1430 1 genic_intron novelGene_992 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3045.2 chr4 - 2937 10 full-splice_match ELF2 ENST00000394235.6 4012 10 16 1059 no_subtype FALSE canonical NA NA 236 None 2 4 0 FALSE 0 0 NA C coding 581 1743 488 2230 PB.3733.1 chr6 + 1156 10 full-splice_match PAK1IP1 ENST00000379568.3 1800 10 272 372 no_subtype FALSE canonical NA NA 983 None 7 2 0 FALSE 0 0 NA A coding 379 1137 20 1156 PB.611.1 chr1 + 1845 12 full-splice_match PHGDH ENST00000369409.8 1913 12 66 2 no_subtype FALSE canonical NA NA 1517 None 16 2 0 FALSE 0 0 NA A coding 533 1599 71 1669 PB.10768.8 chr22 + 1266 5 novel_not_in_catalog APOBEC3C novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1222 None 2 3 0 TRUE 0 0 NA C coding 190 570 66 635 PB.10768.9 chr22 + 2596 7 novel_not_in_catalog APOBEC3C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2331 None 3 13 1 TRUE 0 0 NA C coding 190 570 66 635 PB.11135.2 chrX - 1534 11 novel_not_in_catalog LAMP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 199 None 38 1 0 TRUE 0 0 NA B coding 410 1230 136 1365 PB.10768.4 chr22 + 2681 9 novel_not_in_catalog APOBEC3C novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2386 None 3 17 2 TRUE 0 0 NA C coding 190 570 180 749 PB.8579.2 chr16 + 3534 30 full-splice_match ITGAD ENST00000389202.2 3912 30 23 355 no_subtype FALSE canonical NA NA 3398 None 45 2 1 FALSE 0 0 NA C coding 1161 3483 27 3509 PB.10768.6 chr22 + 2578 10 novel_not_in_catalog APOBEC3C novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2283 None 8 15 3 TRUE 0 0 NA C coding 190 570 66 635 PB.9468.13 chr18 + 3237 12 novel_in_catalog SMCHD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2159 None 2 11 0 FALSE 0 0 NA C coding 433 1299 883 2181 PB.2879.1 chr4 + 2569 5 full-splice_match THAP6 ENST00000311638.7 3549 5 0 980 no_subtype FALSE canonical NA NA 482 None 4 6 0 FALSE 0 0 NA A coding 222 666 69 734 PB.10768.1 chr22 + 1003 6 novel_not_in_catalog APOBEC3B novel NA NA NA NA no_subtype TRUE canonical NA NA 677 None 2 1 0 TRUE 0 0 NA A coding 202 606 84 689 PB.8579.3 chr16 + 5716 31 novel_not_in_catalog ITGAD novel NA NA NA NA no_subtype TRUE canonical NA NA 4232 None 2 22 1 TRUE 0 0 NA C coding 936 2808 55 2862 PB.2654.6 chr3 + 3116 10 novel_not_in_catalog EIF4A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1025 None 28 14 1 TRUE 0 0 NA C coding 313 939 34 972 PB.1531.2 chr2 - 1739 18 novel_not_in_catalog UXS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 148 None 2 2 0 TRUE 0 0 NA B coding 425 1275 55 1329 PB.148.1 chr1 - 1561 1 antisense novelGene_CLIC4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 24 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6681.1 chr11 + 1806 8 novel_not_in_catalog CCDC84 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1599 None 2 14 1 TRUE 0 0 NA A coding 142 426 1232 1657 PB.803.1 chr1 + 1704 13 full-splice_match PPOX ENST00000367999.8 1740 13 32 4 no_subtype FALSE canonical NA NA 1525 None 6 3 0 FALSE 0 0 NA A coding 477 1431 235 1665 PB.671.1 chr1 + 1417 2 full-splice_match MLLT11 ENST00000368921.4 4075 2 2653 5 no_subtype FALSE canonical NA NA 143 None 12 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8475.1 chr16 + 1701 2 genic ITPRIPL2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1527 None 3 11 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.1345.1 chr2 - 1992 11 full-splice_match EFEMP1 ENST00000394555.6 3024 11 384 648 no_subtype FALSE canonical NA NA 45 None 23 1 0 FALSE 0 0 NA A coding 493 1479 53 1531 PB.4745.1 chr7 + 1411 3 full-splice_match GIMAP2 ENST00000223293.9 1449 3 34 4 no_subtype FALSE canonical NA NA 88 None 23 3 0 FALSE 0 0 NA A coding 337 1011 61 1071 PB.430.1 chr1 + 2923 3 antisense novelGene_ANKRD13C_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 551 None 3 20 1 FALSE 0 0 NA A coding 58 174 127 300 PB.3059.1 chr4 + 1660 11 novel_not_in_catalog ZNF330 novel NA NA NA NA no_subtype FALSE canonical NA NA 894 None 11 6 1 TRUE 0 0 NA A coding 285 855 312 1166 PB.10934.1 chrX + 2883 1 antisense novelGene_SLC9A7_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 14 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7433.1 chr13 + 1585 1 genic_intron novelGene_330 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9959.1 chr19 + 3089 4 novel_not_in_catalog ZNF345 novel NA NA NA NA no_subtype FALSE canonical NA NA 308 None 5 20 0 FALSE 0 0 NA A coding 488 1464 355 1818 PB.11135.4 chrX - 2671 11 novel_not_in_catalog LAMP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 223 None 37 6 0 TRUE 0 0 NA B coding 410 1230 160 1389 PB.5490.1 chr9 + 3266 13 novel_in_catalog RABGAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3144 None 2 7 0 FALSE 0 0 NA A coding 406 1218 116 1333 PB.9630.2 chr19 + 857 5 full-splice_match CFD ENST00000327726.10 1201 5 21 323 no_subtype FALSE canonical NA NA 641 None 33 0 0 FALSE 0 0 NA A coding 253 759 27 785 PB.4396.1 chr7 - 3936 7 novel_not_in_catalog URGCP novel NA NA NA NA no_subtype FALSE canonical NA NA 285 None 3 5 0 FALSE 0 0 NA C coding 888 2664 519 3182 PB.3290.1 chr5 + 4348 30 full-splice_match IPO11 ENST00000325324.10 4356 30 11 -3 no_subtype FALSE canonical NA NA 2921 None 2 6 0 FALSE 0 0 NA A coding 975 2925 159 3083 PB.9354.1 chr17 + 2147 7 full-splice_match OTOP2 ENST00000331427.8 2147 7 0 0 no_subtype FALSE canonical NA NA 1610 None 2 1 0 FALSE 0 0 NA A coding 562 1686 93 1778 PB.1470.1 chr2 - 1475 2 full-splice_match FABP1 ENST00000472846.1 546 2 -8 -921 no_subtype FALSE canonical NA NA 117 None 4 7 0 FALSE 0 0 NA C coding 115 345 51 395 PB.4306.1 chr7 - 2465 11 novel_not_in_catalog ANKMY2 novel NA NA NA NA no_subtype FALSE canonical NA NA 237 None 8 9 0 TRUE 0 0 NA A coding 441 1323 171 1493 PB.2766.1 chr4 - 1521 1 genic_intron novelGene_205 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3527.2 chr5 + 3525 11 novel_in_catalog ANKHD1-EIF4EBP3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3191 None 2 4 0 FALSE 0 0 NA B coding 1017 3051 142 3192 PB.3835.1 chr6 - 1769 12 incomplete-splice_match TNXB ENST00000490077.5 2756 14 979 8 5prime_fragment FALSE canonical NA NA 111 None 2 4 0 FALSE 0 0 NA A coding 468 1404 177 1580 PB.5108.1 chr8 - 2853 1 antisense novelGene_FAM91A1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7701.1 chr14 - 3676 1 genic_intron novelGene_518 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7627.5 chr14 + 2630 14 novel_in_catalog DCAF11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1775 None 2 1 0 FALSE 0 0 NA C coding 546 1638 270 1907 PB.7627.4 chr14 + 3784 17 novel_not_in_catalog DCAF11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1723 None 3 15 2 TRUE 0 0 NA C coding 546 1638 218 1855 PB.7627.6 chr14 + 5554 17 novel_not_in_catalog DCAF11 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5181 None 2 25 3 TRUE 0 0 NA C coding 500 1500 331 1830 PB.7627.1 chr14 + 3752 15 full-splice_match DCAF11 ENST00000559115.5 2711 15 161 -1202 no_subtype TRUE canonical NA NA 1695 None 4 12 0 FALSE 0 0 NA C coding 546 1638 190 1827 PB.7627.3 chr14 + 3695 15 novel_in_catalog DCAF11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1634 None 9 10 0 FALSE 0 0 NA C coding 546 1638 129 1766 PB.7627.2 chr14 + 3798 15 full-splice_match DCAF11 ENST00000446197.7 4299 15 483 18 no_subtype FALSE canonical NA NA 1750 None 9 11 0 FALSE 0 0 NA C coding 546 1638 245 1882 PB.3723.5 chr6 - 3879 16 novel_not_in_catalog F13A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 131 None 2 6 0 TRUE 0 0 NA B coding 732 2196 150 2345 PB.10816.2 chr22 + 2716 4 novel_not_in_catalog PARVB novel NA NA NA NA no_subtype TRUE canonical NA NA 1385 None 4 15 0 TRUE 0 0 NA C coding 150 450 100 549 PB.10816.3 chr22 + 1573 13 full-splice_match PARVB ENST00000404989.1 1591 13 54 -36 no_subtype FALSE canonical NA NA 954 None 5 2 0 FALSE 0 0 NA C coding 327 981 48 1028 PB.3723.1 chr6 - 3823 16 novel_not_in_catalog F13A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 75 None 78 6 0 TRUE 0 0 NA B coding 732 2196 94 2289 PB.6703.31 chr11 + 2628 1 novel_in_catalog SORL1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA B coding 122 366 482 847 PB.6703.30 chr11 + 3110 23 novel_in_catalog SORL1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2921 None 2 1 0 FALSE 0 0 NA B coding 936 2808 179 2986 PB.2418.1 chr3 + 993 6 full-splice_match EAF2 ENST00000273668.6 992 6 -12 11 no_subtype FALSE canonical NA NA 819 None 2 2 0 FALSE 0 0 NA A coding 260 780 84 863 PB.2865.1 chr4 + 1453 14 novel_in_catalog RUFY3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1427 None 2 0 0 FALSE 0 0 NA A coding 430 1290 163 1452 PB.3664.3 chr5 - 3244 18 novel_in_catalog HK3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 49 None 4 2 0 FALSE 0 0 NA B coding 479 1437 1551 2987 PB.10043.1 chr19 - 3157 6 novel_not_in_catalog ZNF235 novel NA NA NA NA no_subtype TRUE canonical NA NA 42 None 8 5 0 TRUE 0 0 NA A coding 734 2202 91 2292 PB.8790.1 chr16 - 2728 1 genic GINS2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7689.1 chr14 - 2665 8 incomplete-splice_match SOS2 ENST00000216373.9 5498 23 2816 17 5prime_fragment TRUE canonical NA NA 126 None 2 5 0 FALSE 0 0 NA A coding 348 1044 412 1455 PB.7854.1 chr14 + 1806 11 full-splice_match PSMC1 ENST00000261303.12 4448 11 78 2564 no_subtype FALSE canonical NA NA 1213 None 25 2 0 FALSE 0 0 NA A coding 440 1320 26 1345 PB.9527.1 chr18 + 3095 8 novel_not_in_catalog RNF138 novel NA NA NA NA no_subtype TRUE canonical NA NA 2617 None 35 21 0 TRUE 0 0 NA B coding 245 735 82 816 PB.9527.2 chr18 + 2345 7 novel_in_catalog RNF138 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 750 None 2 10 0 FALSE 0 0 NA B coding 245 735 82 816 PB.4751.1 chr7 - 1114 12 full-splice_match CDK5 ENST00000485972.5 1758 12 636 8 no_subtype FALSE canonical NA NA 83 None 2 0 0 FALSE 0 0 NA A coding 292 876 47 922 PB.7434.1 chr13 - 3212 2 genic_intron novelGene_348 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3169 None 4 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2893.10 chr4 - 1790 8 novel_not_in_catalog CCNI novel NA NA NA NA no_subtype FALSE non_canonical NA NA 520 None 4 12 1 TRUE 0 0 NA B coding 248 744 928 1671 PB.6722.1 chr11 - 1557 4 full-splice_match PUS3 ENST00000227474.7 1843 4 32 254 no_subtype FALSE canonical NA NA 20 None 10 2 0 FALSE 0 0 NA A coding 481 1443 67 1509 PB.5213.2 chr9 + 2606 4 novel_not_in_catalog CD274 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2469 None 2 16 2 TRUE 0 0 NA C coding 136 408 1129 1536 PB.3442.2 chr5 + 2898 14 novel_not_in_catalog CSNK1G3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1647 None 3 9 1 TRUE 0 0 NA B coding 415 1245 455 1699 PB.10183.1 chr19 + 3929 3 genic CTC-444N24.8 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1456 None 2 35 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5213.1 chr9 + 3568 7 full-splice_match CD274 ENST00000381577.3 3644 7 17 59 no_subtype FALSE canonical NA NA 919 None 20 6 0 FALSE 0 0 NA C coding 290 870 70 939 PB.463.3 chr1 + 3495 1 incomplete-splice_match SH3GLB1 ENST00000370558.8 6371 9 2872 5 no_subtype FALSE canonical NA NA NA None 3 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.463.2 chr1 + 5477 1 novel_in_catalog SH3GLB1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 51 0 FALSE 0 0 NA C coding 109 327 3359 3685 PB.463.1 chr1 + 1472 9 full-splice_match SH3GLB1 ENST00000370558.8 6371 9 300 4599 no_subtype FALSE canonical NA NA 1014 None 33 0 0 FALSE 0 0 NA C coding 365 1095 25 1119 PB.3339.1 chr5 - 1686 13 full-splice_match WDR41 ENST00000296679.8 3958 13 93 2179 no_subtype FALSE canonical NA NA 334 None 7 3 0 FALSE 0 0 NA A coding 459 1377 284 1660 PB.3643.1 chr5 + 1193 10 full-splice_match NPM1 ENST00000393820.2 1598 10 1 404 no_subtype FALSE canonical NA NA 868 None 4 5 0 FALSE 0 0 NA C coding 253 759 116 874 PB.1470.2 chr2 - 2954 1 novel_in_catalog FABP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 11 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8457.5 chr16 - 6908 27 novel_not_in_catalog KIAA0430 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 27 None 3 12 0 TRUE 0 0 NA B coding 1236 3708 901 4608 PB.2534.2 chr3 + 2095 14 full-splice_match EIF2A ENST00000460851.5 2198 14 100 3 no_subtype FALSE canonical NA NA 1701 None 15 3 0 FALSE 0 0 NA C coding 585 1755 10 1764 PB.7242.2 chr12 + 3028 15 novel_not_in_catalog ANKRD13A novel NA NA NA NA no_subtype TRUE canonical NA NA 1738 None 4 5 1 FALSE 0 0 NA A coding 591 1773 159 1931 PB.11190.1 chrX + 2800 1 incomplete-splice_match VMA21 ENST00000330374.6 4717 3 1914 4 no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8985.1 chr17 - 1247 3 full-splice_match TMEM11 ENST00000577419.5 1246 3 0 -1 no_subtype FALSE canonical NA NA 71 None 3 4 0 FALSE 0 0 NA A coding 172 516 362 877 PB.10476.1 chr20 + 1604 5 full-splice_match MRGBP ENST00000370487.4 2781 5 28 1149 no_subtype FALSE canonical NA NA 470 None 8 11 0 FALSE 0 0 NA A coding 204 612 44 655 PB.2685.2 chr3 + 1591 3 antisense novelGene_RNF168_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1321 None 2 15 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.2685.1 chr3 + 1708 3 antisense novelGene_RNF168_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1446 None 2 15 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.5075.6 chr8 - 1796 12 incomplete-splice_match RAD21 ENST00000297338.6 3749 14 58 1895 internal_fragment FALSE canonical NA NA 198 None 25 0 0 FALSE 0 0 NA C coding 522 1566 231 1796 PB.6101.1 chr11 + 2378 10 full-splice_match RIC8A ENST00000526104.5 3703 10 1318 7 no_subtype FALSE canonical NA NA 1501 None 15 11 0 FALSE 0 0 NA C coding 531 1593 27 1619 PB.6101.2 chr11 + 3423 9 novel_in_catalog RIC8A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2546 None 14 14 0 FALSE 0 0 NA C coding 384 1152 6 1157 PB.2051.1 chr3 - 2845 2 genic_intron novelGene_219 novel NA NA NA NA no_subtype FALSE canonical NA NA 1821 None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.338.1 chr1 - 1690 16 full-splice_match MUTYH ENST00000355498.6 1776 16 78 8 no_subtype FALSE canonical NA NA 62 None 3 1 0 FALSE 0 0 NA A coding 521 1563 69 1631 PB.6796.1 chr12 + 905 6 full-splice_match EMG1 ENST00000599672.5 4898 6 24 3969 no_subtype FALSE canonical NA NA 628 None 3 4 0 FALSE 0 0 NA A coding 244 732 8 739 PB.5827.1 chr10 + 5760 16 novel_not_in_catalog SGPL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1782 None 15 18 0 TRUE 0 0 NA B coding 568 1704 217 1920 PB.2630.2 chr3 + 2546 7 full-splice_match FAM131A ENST00000450976.5 1335 7 16 -1227 no_subtype FALSE canonical NA NA 780 None 5 5 0 FALSE 0 0 NA C coding 281 843 411 1253 PB.5827.3 chr10 + 2608 1 incomplete-splice_match SGPL1 ENST00000373202.7 5745 15 3136 2 no_subtype FALSE canonical NA NA NA None 55 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1531.5 chr2 - 2724 4 novel_in_catalog UXS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 147 None 3 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7771.1 chr14 + 1389 10 novel_not_in_catalog ARG2 novel NA NA NA NA no_subtype FALSE canonical NA NA 920 None 5 2 0 TRUE 0 0 NA A coding 354 1062 62 1123 PB.2858.1 chr4 - 3252 17 full-splice_match YTHDC1 ENST00000579690.5 2983 17 -271 2 no_subtype FALSE canonical NA NA 299 None 2 8 0 FALSE 0 0 NA C coding 735 2205 272 2476 PB.4204.2 chr6 + 1564 7 full-splice_match VIP ENST00000367244.7 1584 7 -1 21 no_subtype FALSE canonical NA NA 729 None 13 3 0 FALSE 0 0 NA A coding 170 510 174 683 PB.2909.4 chr4 - 2612 2 genic_intron novelGene_761 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1425 None 4 19 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9398.8 chr17 + 3243 10 full-splice_match SEPT9 ENST00000592951.5 1793 10 100 -1550 no_subtype FALSE canonical NA NA 1175 None 58 17 0 FALSE 0 0 NA C coding 335 1005 304 1308 PB.8101.1 chr15 - 5750 31 novel_not_in_catalog NEDD4 novel NA NA NA NA no_subtype TRUE canonical NA NA 134 None 3 22 0 TRUE 0 0 NA B coding 900 2700 90 2789 PB.7758.9 chr14 + 3559 11 incomplete-splice_match PLEKHG3 ENST00000394691.6 4397 15 841 -3 internal_fragment FALSE canonical NA NA 2198 None 3 2 0 FALSE 0 0 NA B coding 958 2874 44 2917 PB.7278.1 chr12 + 1808 4 full-splice_match RITA1 ENST00000548278.1 2053 4 234 11 no_subtype FALSE canonical NA NA 760 None 9 4 0 FALSE 0 0 NA A coding 269 807 459 1265 PB.6569.2 chr11 + 5844 17 novel_not_in_catalog PCF11 novel NA NA NA NA no_subtype FALSE canonical NA NA 4737 None 5 6 0 TRUE 0 0 NA C coding 1555 4665 286 4950 PB.10740.1 chr22 - 1420 7 full-splice_match RAC2 ENST00000249071.10 1482 7 45 17 no_subtype TRUE canonical NA NA 112 None 567 1 0 FALSE 0 0 NA C coding 192 576 78 653 PB.8859.1 chr17 - 2640 4 full-splice_match GGT6 ENST00000381550.7 2145 4 -5 -490 no_subtype FALSE canonical NA NA 200 None 4 9 0 FALSE 0 0 NA A coding 499 1497 61 1557 PB.5022.2 chr8 - 5792 6 novel_not_in_catalog TP53INP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 209 None 7 45 2 FALSE 0 0 NA C coding 164 492 526 1017 PB.10740.4 chr22 - 3489 4 novel_not_in_catalog RAC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 146 None 17 9 1 TRUE 0 0 NA C coding 115 345 1315 1659 PB.10740.5 chr22 - 5954 4 novel_not_in_catalog RAC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 604 None 8 25 1 TRUE 0 0 NA C coding 46 138 407 544 PB.9805.5 chr19 - 1659 1 novel_in_catalog FARSA novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA C coding 122 366 25 390 PB.9805.4 chr19 - 1808 13 full-splice_match FARSA ENST00000314606.8 1814 13 4 2 no_subtype FALSE canonical NA NA 162 None 20 0 0 FALSE 0 0 NA C coding 508 1524 16 1539 PB.7409.1 chr13 + 1911 3 full-splice_match POLR1D ENST00000399697.7 2036 3 118 7 no_subtype FALSE canonical NA NA 188 None 11 15 0 FALSE 0 0 NA A coding 122 366 88 453 PB.9553.1 chr18 - 2582 4 novel_in_catalog EPG5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 250 None 2 15 0 FALSE 0 0 NA A coding 246 738 24 761 PB.1902.1 chr2 + 1660 3 genic_intron novelGene_1407 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 927 None 8 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9805.3 chr19 - 2135 15 novel_not_in_catalog FARSA novel NA NA NA NA no_subtype TRUE non_canonical NA NA 148 None 2 1 1 TRUE 0 0 NA C coding 508 1524 2 1525 PB.7771.4 chr14 + 1414 1 genic_intron novelGene_636 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1528.3 chr2 + 5936 2 genic_intron novelGene_954 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2477 None 2 37 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2742.1 chr4 - 2935 19 novel_not_in_catalog ACOX3 novel NA NA NA NA no_subtype FALSE canonical NA NA 145 None 6 8 0 TRUE 0 0 NA B coding 700 2100 160 2259 PB.1528.1 chr2 + 1376 11 full-splice_match MRPS9 ENST00000258455.7 1500 11 96 28 no_subtype FALSE canonical NA NA 1113 None 30 1 0 FALSE 0 0 NA C coding 396 1188 15 1202 PB.4432.1 chr7 - 3229 2 full-splice_match ERV3-1 ENST00000394323.2 2719 2 -68 -442 no_subtype FALSE canonical NA NA 181 None 10 8 0 FALSE 0 0 NA C coding 564 1692 690 2381 PB.4432.2 chr7 - 7511 1 genic ERV3-1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 39 0 FALSE 0 0 NA C coding 564 1692 4968 6659 PB.819.1 chr1 + 1868 9 novel_in_catalog UAP1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1307 None 2 2 0 FALSE 0 0 NA A coding 443 1329 69 1397 PB.2909.2 chr4 - 1713 9 full-splice_match HNRNPD ENST00000313899.11 3033 9 -19 1339 no_subtype FALSE canonical NA NA 530 None 3 0 0 FALSE 0 0 NA C coding 355 1065 298 1362 PB.4183.1 chr6 + 3414 4 novel_not_in_catalog RAB32 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2034 None 4 36 0 TRUE 0 0 NA A coding 225 675 22 696 PB.7959.12 chr14 - 2550 5 fusion IGHG4,IGHG2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 298 None 2 21 1 TRUE 0 0 NA A coding 265 795 355 1149 PB.6569.1 chr11 + 1513 5 incomplete-splice_match PCF11 ENST00000530304.5 2649 8 40 1096 3prime_fragment FALSE canonical NA NA 959 None 4 3 0 FALSE 0 0 NA C coding 418 1254 258 1511 PB.8447.1 chr16 + 3750 14 novel_not_in_catalog ERCC4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3061 None 10 8 2 TRUE 0 0 NA B coding 905 2715 20 2734 PB.8447.2 chr16 + 3269 3 novel_not_in_catalog ERCC4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3012 None 2 16 0 TRUE 0 0 NA B coding 126 378 1 378 PB.1574.5 chr2 - 1926 15 novel_not_in_catalog BIN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 213 None 2 1 0 TRUE 0 0 NA B coding 439 1317 130 1446 PB.9825.1 chr19 - 1222 1 antisense novelGene_ADGRE5_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3325.1 chr5 - 1760 9 full-splice_match ANKRA2 ENST00000296785.7 2063 9 294 9 no_subtype FALSE canonical NA NA 261 None 2 3 0 FALSE 0 0 NA A coding 313 939 366 1304 PB.8824.1 chr17 + 1694 5 novel_not_in_catalog MRM3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1482 None 17 4 0 TRUE 0 0 NA B coding 420 1260 5 1264 PB.2506.3 chr3 - 2049 2 novel_not_in_catalog TFDP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 318 None 2 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8824.2 chr17 + 2929 6 novel_not_in_catalog MRM3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2294 None 13 27 1 TRUE 0 0 NA B coding 420 1260 5 1264 PB.4002.1 chr6 - 810 6 full-splice_match HMGN3 ENST00000275036.11 831 6 15 6 no_subtype FALSE canonical NA NA 129 None 2 4 0 FALSE 0 0 NA A coding 77 231 115 345 PB.10863.1 chrX + 3416 12 novel_not_in_catalog MSL3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2648 None 3 11 0 TRUE 0 0 NA A coding 141 423 2323 2745 PB.771.1 chr1 + 2483 11 full-splice_match IFI16 ENST00000368131.8 2734 11 241 10 no_subtype FALSE canonical NA NA 2158 None 511 5 0 FALSE 0 0 NA A coding 729 2187 50 2236 PB.4733.1 chr7 - 2665 4 full-splice_match ZNF425 ENST00000378061.6 3220 4 105 450 no_subtype FALSE canonical NA NA 46 None 2 3 0 FALSE 0 0 NA A coding 752 2256 29 2284 PB.10002.1 chr19 + 1271 6 full-splice_match SNRPA ENST00000243563.7 1621 6 346 4 no_subtype FALSE canonical NA NA 893 None 2 2 0 FALSE 0 0 NA A coding 282 846 205 1050 PB.771.6 chr1 + 3939 3 genic_intron novelGene_1270 novel NA NA NA NA no_subtype FALSE canonical NA NA 3263 None 2 24 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.6115.2 chr11 + 3283 20 novel_in_catalog EPS8L2 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 2461 None 2 10 2 FALSE 0 0 NA C coding 464 1392 160 1551 PB.5186.2 chr8 - 842 6 full-splice_match RPL8 ENST00000262584.7 1041 6 197 2 no_subtype FALSE canonical NA NA 25 None 17 0 0 FALSE 0 0 NA C coding 257 771 37 807 PB.6115.1 chr11 + 3046 21 full-splice_match EPS8L2 ENST00000318562.12 3148 21 98 4 no_subtype FALSE canonical NA NA 2223 None 32 7 1 FALSE 0 0 NA C coding 715 2145 157 2301 PB.8568.1 chr16 + 1387 11 full-splice_match STX4 ENST00000313843.7 1481 11 58 36 no_subtype FALSE canonical NA NA 1166 None 5 1 0 FALSE 0 0 NA A coding 297 891 258 1148 PB.1744.1 chr2 - 3325 8 novel_not_in_catalog SLC40A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 372 None 509 11 1 FALSE 0 0 NA B coding 558 1674 365 2038 PB.8034.1 chr15 - 3040 28 incomplete-splice_match UBR1 ENST00000546274.6 3332 29 78 214 internal_fragment FALSE canonical NA NA 94 None 5 7 1 FALSE 0 0 NA A coding 1009 3027 14 3040 PB.5470.2 chr9 + 3087 1 incomplete-splice_match TRIM32 ENST00000450136.1 3717 2 80 551 no_subtype FALSE canonical NA NA NA None 29 5 0 FALSE 0 0 NA A coding 653 1959 82 2040 PB.2165.2 chr3 - 2874 5 genic_intron novelGene_476 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 271 None 4 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5132.9 chr8 - 2911 5 incomplete-splice_match SLA ENST00000519341.5 826 7 408 -2493 5prime_fragment FALSE canonical NA NA 104 None 3 8 0 FALSE 0 0 NA B coding 157 471 145 615 PB.5132.7 chr8 - 2665 1 full-splice_match MIR7848 ENST00000617402.1 101 1 -1498 -1066 no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A coding 109 327 1220 1546 PB.5993.3 chr10 - 2833 11 full-splice_match ACTR1A ENST00000369905.8 2829 11 -16 12 no_subtype FALSE canonical NA NA 128 None 203 5 0 FALSE 0 0 NA C coding 376 1128 81 1208 PB.5993.2 chr10 - 2775 10 novel_in_catalog ACTR1A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 127 None 4 4 0 FALSE 0 0 NA C coding 329 987 156 1142 PB.5132.3 chr8 - 3060 7 novel_in_catalog SLA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 62 None 2 13 0 FALSE 0 0 NA B coding 206 618 103 720 PB.4960.1 chr8 - 1897 13 novel_not_in_catalog CPA6 novel NA NA NA NA no_subtype FALSE canonical NA NA 377 None 2 2 0 TRUE 0 0 NA B coding 437 1311 262 1572 PB.4718.13 chr7 + 2716 4 antisense novelGene_KIAA1147_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2622 None 2 11 1 FALSE 0 0 NA B coding 111 333 1007 1339 PB.4100.1 chr6 + 2911 3 novel_not_in_catalog FAM26E novel NA NA NA NA no_subtype FALSE canonical NA NA 1819 None 3 17 1 TRUE 0 0 NA A coding 309 927 28 954 PB.716.4 chr1 + 2748 21 novel_not_in_catalog ADAM15 novel NA NA NA NA no_subtype FALSE canonical NA NA 2433 None 33 3 0 FALSE 0 0 NA B coding 499 1497 977 2473 PB.3841.2 chr6 - 1447 4 novel_not_in_catalog GPSM3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 450 None 3 7 2 TRUE 0 0 NA C coding 146 438 409 846 PB.3841.1 chr6 - 1427 4 full-splice_match GPSM3 ENST00000375040.7 1476 4 42 7 no_subtype FALSE canonical NA NA 393 None 92 3 0 FALSE 0 0 NA C coding 160 480 352 831 PB.218.2 chr1 + 1872 11 novel_in_catalog TINAGL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1028 None 3 5 0 FALSE 0 0 NA C coding 362 1086 81 1166 PB.716.8 chr1 + 2834 22 novel_not_in_catalog ADAM15 novel NA NA NA NA no_subtype FALSE canonical NA NA 2519 None 4 2 0 FALSE 0 0 NA B coding 524 1572 988 2559 PB.1315.1 chr2 + 3171 6 incomplete-splice_match EPAS1 ENST00000263734.4 5166 16 1987 8 internal_fragment FALSE canonical NA NA 984 None 2 14 0 FALSE 0 0 NA A coding 364 1092 42 1133 PB.520.2 chr1 - 3280 7 novel_not_in_catalog EXTL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 437 None 2 13 0 TRUE 0 0 NA C coding 330 990 738 1727 PB.1275.4 chr2 - 2493 19 novel_not_in_catalog EIF2AK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 51 None 11 15 5 TRUE 0 0 NA B coding 262 786 235 1020 PB.4423.2 chr7 - 3627 2 genic_intron novelGene_539 novel NA NA NA NA no_subtype TRUE canonical NA NA 672 None 2 25 1 FALSE 0 0 NA A coding 172 516 2399 2914 PB.5828.1 chr10 - 3358 1 antisense novelGene_SGPL1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 47 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9819.1 chr19 + 1355 1 antisense novelGene_PRKACA_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.926.3 chr1 - 3714 15 novel_in_catalog IVNS1ABP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 291 None 7 4 0 FALSE 0 0 NA C coding 302 906 2540 3445 PB.6955.2 chr12 - 1929 15 full-splice_match MCRS1 ENST00000343810.8 1928 15 11 -12 no_subtype FALSE canonical NA NA 95 None 21 1 0 FALSE 0 0 NA C coding 462 1386 206 1591 PB.926.1 chr1 - 2643 15 full-splice_match IVNS1ABP ENST00000367498.7 4199 15 56 1500 no_subtype FALSE canonical NA NA 321 None 158 0 0 FALSE 0 0 NA C coding 642 1926 568 2493 PB.1264.1 chr2 + 6835 34 novel_not_in_catalog BIRC6 novel NA NA NA NA no_subtype FALSE canonical NA NA 6788 None 3 8 0 FALSE 0 0 NA B coding 2254 6762 72 6833 PB.1264.2 chr2 + 6759 34 novel_not_in_catalog BIRC6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 6721 None 3 3 1 TRUE 0 0 NA B coding 1162 3486 3272 6757 PB.6955.3 chr12 - 3058 13 novel_in_catalog MCRS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 84 None 8 4 0 FALSE 0 0 NA C coding 271 813 1907 2719 PB.3318.2 chr5 + 1764 10 full-splice_match PTCD2 ENST00000380639.9 11151 10 19 9368 no_subtype FALSE canonical NA NA 939 None 6 3 0 FALSE 0 0 NA C coding 383 1149 13 1161 PB.9839.1 chr19 - 1970 15 novel_in_catalog AKAP8L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 75 None 3 1 0 FALSE 0 0 NA B coding 612 1836 63 1898 PB.9839.2 chr19 - 3062 13 novel_not_in_catalog AKAP8L novel NA NA NA NA no_subtype TRUE non_canonical NA NA 75 None 2 13 0 TRUE 0 0 NA B coding 524 1572 63 1634 PB.3318.1 chr5 + 2937 11 novel_not_in_catalog PTCD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2306 None 3 10 0 TRUE 0 0 NA C coding 383 1149 17 1165 PB.4708.2 chr7 + 1901 14 novel_not_in_catalog TBXAS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1655 None 11 2 0 TRUE 0 0 NA B coding 533 1599 129 1727 PB.9470.5 chr18 - 5868 20 novel_in_catalog LPIN2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 180 None 8 24 0 FALSE 0 0 NA B coding 933 2799 79 2877 PB.9470.4 chr18 - 6197 20 novel_in_catalog LPIN2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 210 None 3 32 0 FALSE 0 0 NA B coding 896 2688 220 2907 PB.4093.2 chr6 - 5997 39 full-splice_match LAMA4 ENST00000522006.5 6438 39 164 277 no_subtype TRUE canonical NA NA 105 None 6 3 0 FALSE 0 0 NA C coding 1816 5448 247 5694 PB.5317.2 chr9 - 1788 7 novel_in_catalog PTAR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 157 None 18 2 0 FALSE 0 0 NA B coding 429 1287 72 1358 PB.9470.3 chr18 - 6061 21 novel_not_in_catalog LPIN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 2 27 0 TRUE 0 0 NA B coding 900 2700 72 2771 PB.3120.10 chr4 - 3792 26 incomplete-splice_match DDX60 ENST00000393743.7 6071 38 55 2224 internal_fragment FALSE canonical NA NA 131 None 6 0 0 FALSE 0 0 NA B coding 1185 3555 238 3792 PB.2269.1 chr3 + 1562 6 full-splice_match RPP14 ENST00000295959.9 3121 6 -30 1589 no_subtype FALSE canonical NA NA 512 None 8 5 0 FALSE 0 0 NA C coding 168 504 687 1190 PB.2269.2 chr3 + 2664 7 novel_not_in_catalog RPP14 novel NA NA NA NA no_subtype FALSE canonical NA NA 2241 None 2 20 1 TRUE 0 0 NA C coding 168 504 648 1151 PB.2269.3 chr3 + 1497 7 novel_not_in_catalog RPP14 novel NA NA NA NA no_subtype FALSE canonical NA NA 447 None 9 7 1 TRUE 0 0 NA C coding 168 504 622 1125 PB.2269.4 chr3 + 1449 6 full-splice_match RPP14 ENST00000445193.7 7985 6 330 6206 no_subtype FALSE canonical NA NA 399 None 2 5 0 FALSE 0 0 NA C coding 168 504 574 1077 PB.3626.1 chr5 - 3212 3 novel_not_in_catalog PWWP2A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 621 None 8 9 0 TRUE 0 0 NA A coding 755 2265 38 2302 PB.8226.1 chr15 + 2970 2 genic_intron novelGene_717 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1074 None 9 19 1 FALSE 0 0 NA A coding 100 300 356 655 PB.1924.2 chr2 + 1655 7 novel_not_in_catalog INPP5D novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1425 None 3 2 0 TRUE 0 0 NA B coding 221 663 138 800 PB.1924.1 chr2 + 2513 3 novel_not_in_catalog INPP5D novel NA NA NA NA no_subtype FALSE canonical NA NA 963 None 43 13 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.5015.1 chr8 - 5825 24 full-splice_match KIAA1429 ENST00000297591.9 6528 24 -137 840 no_subtype FALSE canonical NA NA 276 None 22 5 0 FALSE 0 0 NA C coding 1812 5436 214 5649 PB.538.2 chr1 + 1732 6 novel_in_catalog SARS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1343 None 2 2 0 FALSE 0 0 NA C coding 281 843 656 1498 PB.538.3 chr1 + 2707 4 novel_in_catalog SARS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2322 None 2 6 0 FALSE 0 0 NA C coding 172 516 656 1171 PB.6161.1 chr11 + 2713 3 antisense novelGene_AC015691.13_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1462 None 3 20 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.538.1 chr1 + 1783 11 full-splice_match SARS ENST00000234677.6 1852 11 65 4 no_subtype FALSE canonical NA NA 1397 None 96 2 0 FALSE 0 0 NA C coding 514 1542 11 1552 PB.3402.1 chr5 - 3476 8 novel_not_in_catalog NUDT12 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 102 None 11 18 1 TRUE 0 0 NA A coding 462 1386 109 1494 PB.4015.2 chr6 - 1512 11 novel_in_catalog PGM3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 86 None 2 2 0 FALSE 0 0 NA C coding 456 1368 89 1456 PB.73.3 chr1 - 1907 10 novel_not_in_catalog CASP9 novel NA NA NA NA no_subtype FALSE canonical NA NA 137 None 2 2 0 TRUE 0 0 NA C coding 416 1248 6 1253 PB.73.2 chr1 - 2888 9 novel_not_in_catalog CASP9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 137 None 9 8 0 TRUE 0 0 NA C coding 373 1119 6 1124 PB.73.1 chr1 - 1927 9 full-splice_match CASP9 ENST00000333868.9 2019 9 90 2 no_subtype FALSE canonical NA NA 137 None 9 3 0 FALSE 0 0 NA C coding 416 1248 6 1253 PB.4602.1 chr7 - 2804 21 novel_not_in_catalog SLC26A3 novel NA NA NA NA no_subtype TRUE canonical NA NA 107 None 2 14 1 TRUE 0 0 NA C coding 740 2220 196 2415 PB.2792.1 chr4 - 3102 3 antisense novelGene_RP11-177C12.1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 652 None 8 22 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1710.12 chr2 - 6353 6 novel_not_in_catalog WIPF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 90 None 2 38 1 TRUE 0 0 NA C coding 403 1209 40 1248 PB.1710.13 chr2 - 1264 1 novel_in_catalog WIPF1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 9 0 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1710.11 chr2 - 3460 8 full-splice_match WIPF1 ENST00000359761.7 2003 8 -43 -1414 no_subtype FALSE canonical NA NA 153 None 3 11 0 FALSE 0 0 NA C coding 503 1509 192 1700 PB.1710.14 chr2 - 1761 3 full-splice_match WIPF1 ENST00000480400.1 593 3 1 -1169 no_subtype FALSE canonical NA NA 203 None 11 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4418.11 chr7 + 1556 1 genic_intron novelGene_495 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.764.1 chr1 - 1561 6 full-splice_match CD5L ENST00000368174.4 2191 6 24 606 no_subtype FALSE canonical NA NA 101 None 4 3 0 FALSE 0 0 NA A coding 347 1041 74 1114 PB.3646.1 chr5 - 4491 21 novel_not_in_catalog STK10 novel NA NA NA NA no_subtype FALSE canonical NA NA 485 None 94 15 0 TRUE 0 0 NA B coding 968 2904 330 3233 PB.3646.5 chr5 - 2611 7 novel_not_in_catalog STK10 novel NA NA NA NA no_subtype FALSE canonical NA NA 27 None 2 20 1 FALSE 0 0 NA B coding 258 774 73 846 PB.2288.1 chr3 - 2961 2 genic_intron novelGene_635 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 265 None 2 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5336.1 chr9 - 1466 1 incomplete-splice_match GNAQ ENST00000286548.8 6539 7 4882 192 no_subtype FALSE canonical NA NA NA None 6 3 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2275.1 chr3 - 901 8 full-splice_match THOC7 ENST00000295899.9 990 8 86 3 no_subtype FALSE canonical NA NA 46 None 3 3 0 FALSE 0 0 NA A coding 204 612 28 639 PB.3225.8 chr5 + 3460 19 novel_not_in_catalog C7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2919 None 2 11 1 TRUE 0 0 NA C coding 843 2529 113 2641 PB.3225.7 chr5 + 3371 19 novel_not_in_catalog C7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2834 None 16 8 1 TRUE 0 0 NA C coding 843 2529 115 2643 PB.3225.6 chr5 + 3332 21 novel_not_in_catalog C7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2818 None 11 11 3 TRUE 0 0 NA C coding 843 2529 115 2643 PB.3225.5 chr5 + 3999 18 full-splice_match C7 ENST00000313164.9 4257 18 253 5 no_subtype FALSE canonical NA NA 2456 None 64 9 0 FALSE 0 0 NA C coding 843 2529 107 2635 PB.3225.4 chr5 + 4000 19 novel_not_in_catalog C7 novel NA NA NA NA no_subtype FALSE canonical NA NA 3197 None 2 30 1 TRUE 0 0 NA C coding 843 2529 125 2653 PB.3225.3 chr5 + 3487 19 novel_not_in_catalog C7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2972 None 5 10 1 TRUE 0 0 NA C coding 843 2529 134 2662 PB.3225.2 chr5 + 3495 19 novel_not_in_catalog C7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2958 None 2 16 1 TRUE 0 0 NA C coding 843 2529 203 2731 PB.2512.1 chr3 + 3219 1 genic_intron novelGene_1209 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A coding 106 318 195 512 PB.6387.2 chr11 - 1979 12 novel_in_catalog BSCL2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 372 None 6 6 0 FALSE 0 0 NA C coding 462 1386 502 1887 PB.946.39 chr1 + 1859 1 novel_in_catalog PTPRC novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 5 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7693.1 chr14 - 3317 1 incomplete-splice_match NIN ENST00000476352.5 10225 32 6901 8 no_subtype FALSE canonical NA NA NA None 3 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9309.1 chr17 - 2734 1 genic_intron novelGene_615 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA A coding 110 330 410 739 PB.6550.2 chr11 - 3046 15 novel_in_catalog PAK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 160 None 23 4 0 FALSE 0 0 NA C coding 545 1635 182 1816 PB.5538.2 chr9 - 3422 26 novel_not_in_catalog GOLGA2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 40 None 2 18 3 TRUE 0 0 NA B coding 924 2772 111 2882 PB.946.30 chr1 + 1411 2 genic_intron novelGene_1373 novel NA NA NA NA no_subtype FALSE canonical NA NA 492 None 5 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8845.2 chr17 + 6570 28 novel_not_in_catalog RAP1GAP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3000 None 11 24 1 TRUE 0 0 NA B coding 715 2145 61 2205 PB.8845.3 chr17 + 6398 28 novel_not_in_catalog RAP1GAP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 2831 None 4 30 1 TRUE 0 0 NA B coding 715 2145 61 2205 PB.8845.1 chr17 + 6612 29 novel_not_in_catalog RAP1GAP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3044 None 9 25 1 TRUE 0 0 NA B coding 730 2190 60 2249 PB.10714.3 chr22 - 2974 6 novel_not_in_catalog PRR14L novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2696 None 2 26 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.10714.2 chr22 - 2793 1 incomplete-splice_match PRR14L ENST00000327423.10 10826 9 8027 7 no_subtype FALSE canonical NA NA NA None 5 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2464.1 chr3 + 2965 24 full-splice_match COPG1 ENST00000314797.10 3078 24 53 60 no_subtype FALSE canonical NA NA 2545 None 236 3 0 FALSE 0 0 NA A coding 874 2622 52 2673 PB.765.1 chr1 - 3501 1 genic_intron novelGene_1266 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A coding 101 303 1590 1892 PB.10102.3 chr19 + 2732 6 novel_in_catalog CD37 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1461 None 5 19 1 FALSE 0 0 NA B coding 148 444 75 518 PB.5710.1 chr10 - 4331 5 genic_intron novelGene_232 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 82 None 2 30 4 FALSE 0 0 NA A coding 120 360 2875 3234 PB.10102.1 chr19 + 1166 9 novel_not_in_catalog CD37 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 916 None 33 3 1 TRUE 0 0 NA B coding 364 1092 75 1166 PB.8550.1 chr16 + 1352 9 full-splice_match PPP4C ENST00000279387.11 1407 9 45 10 no_subtype FALSE canonical NA NA 917 None 63 6 0 FALSE 0 0 NA C coding 307 921 124 1044 PB.10629.1 chr22 + 1895 20 novel_not_in_catalog CDC45 novel NA NA NA NA no_subtype TRUE canonical NA NA 1780 None 2 8 3 TRUE 0 0 NA A coding 568 1704 73 1776 PB.8550.3 chr16 + 1460 8 full-splice_match PPP4C ENST00000563200.5 1447 8 15 -28 no_subtype FALSE canonical NA NA 1017 None 2 7 0 FALSE 0 0 NA C coding 187 561 137 697 PB.8550.2 chr16 + 1592 8 full-splice_match PPP4C ENST00000561610.1 1333 8 -204 -55 no_subtype FALSE canonical NA NA 1151 None 2 8 0 FALSE 0 0 NA C coding 307 921 358 1278 PB.9315.5 chr17 - 2597 17 novel_in_catalog HELZ novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 48 None 2 6 1 FALSE 0 0 NA C coding 796 2388 124 2511 PB.9315.4 chr17 - 2661 18 novel_in_catalog HELZ novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 49 None 3 0 0 FALSE 0 0 NA C coding 796 2388 181 2568 PB.9315.6 chr17 - 6522 2 novel_not_in_catalog HELZ novel NA NA NA NA no_subtype FALSE canonical NA NA 5322 None 2 46 1 TRUE 0 0 NA C coding 118 354 4402 4755 PB.6814.16 chr12 - 2812 1 novel_in_catalog A2M novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4616.1 chr7 - 2891 5 full-splice_match BMT2 ENST00000297145.8 3981 5 69 1021 no_subtype FALSE canonical NA NA 257 None 5 6 0 FALSE 0 0 NA C coding 405 1215 98 1312 PB.2429.1 chr3 - 3285 2 genic_intron novelGene_1069 novel NA NA NA NA no_subtype FALSE canonical NA NA 1808 None 3 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2215.8 chr3 - 1450 1 novel_in_catalog RASSF1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6453.1 chr11 + 2744 1 genic_intron novelGene_622 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A coding 15 45 281 325 PB.588.1 chr1 + 2761 1 genic_intron novelGene_1017 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6662.9 chr11 - 5764 1 novel_in_catalog JAML novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 34 0 FALSE 0 0 NA B coding 104 312 4448 4759 PB.6662.8 chr11 - 3698 6 novel_in_catalog JAML novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 151 None 2 19 0 FALSE 0 0 NA B coding 192 576 172 747 PB.2215.2 chr3 - 1847 6 novel_not_in_catalog RASSF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 284 None 7 12 2 TRUE 0 0 NA C coding 189 567 484 1050 PB.8540.2 chr16 + 1654 4 novel_in_catalog MAZ novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 580 None 2 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2215.4 chr3 - 1710 5 full-splice_match RASSF1 ENST00000395117.6 1745 5 31 4 no_subtype FALSE canonical NA NA 255 None 14 2 0 FALSE 0 0 NA C coding 189 567 352 918 PB.2215.7 chr3 - 2588 6 novel_in_catalog RASSF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 290 None 3 6 0 FALSE 0 0 NA C coding 260 780 1013 1792 PB.8540.1 chr16 + 1431 3 full-splice_match MAZ ENST00000568544.5 1464 3 59 -26 no_subtype FALSE canonical NA NA 356 None 9 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10181.1 chr19 - 2727 2 full-splice_match ZNF835 ENST00000537055.3 3450 2 18 705 no_subtype FALSE canonical NA NA 167 None 2 18 0 FALSE 0 0 NA A coding 537 1611 215 1825 PB.3217.1 chr5 - 2982 15 full-splice_match DAB2 ENST00000320816.10 4534 15 192 1360 no_subtype FALSE canonical NA NA 175 None 2 1 0 FALSE 0 0 NA C coding 770 2310 277 2586 PB.5069.1 chr8 + 2699 1 novel_in_catalog EBAG9 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8163.1 chr15 + 2364 5 full-splice_match RAB11A ENST00000261890.6 4930 5 25 2541 no_subtype FALSE canonical NA NA 614 None 2 8 0 FALSE 0 0 NA A coding 216 648 104 751 PB.8287.3 chr15 - 2570 3 genic_intron novelGene_822 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1166 None 2 21 1 FALSE 0 0 NA A coding 119 357 1364 1720 PB.4511.1 chr7 - 5801 2 full-splice_match SAMD9 ENST00000620985.4 6754 2 37 916 no_subtype FALSE canonical NA NA 124 None 20 4 1 FALSE 0 0 NA C coding 1589 4767 133 4899 PB.9003.1 chr17 + 5392 37 novel_not_in_catalog SUPT6H novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5103 None 35 1 0 FALSE 0 0 NA A coding 1726 5178 110 5287 PB.10595.1 chr21 - 2558 9 novel_not_in_catalog ICOSLG novel NA NA NA NA no_subtype TRUE canonical NA NA 102 None 14 13 1 TRUE 0 0 NA A coding 302 906 134 1039 PB.6974.4 chr12 - 4105 16 novel_in_catalog SLC11A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 51 None 2 17 0 FALSE 0 0 NA C coding 561 1683 90 1772 PB.4956.1 chr8 + 1943 16 novel_in_catalog CSPP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1908 None 2 3 0 FALSE 0 0 NA A coding 642 1926 16 1941 PB.3418.2 chr5 - 3004 6 novel_not_in_catalog REEP5 novel NA NA NA NA no_subtype FALSE canonical NA NA 174 None 370 17 1 TRUE 0 0 NA B coding 189 567 57 623 PB.1254.1 chr2 + 1819 2 novel_not_in_catalog LCLAT1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 730 None 2 17 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.6206.3 chr11 - 3411 1 novel_in_catalog ZBED5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 14 24 0 FALSE 0 0 NA C coding 101 303 3109 3411 PB.9182.1 chr17 - 4422 16 full-splice_match MAP3K14 ENST00000344686.6 4460 16 21 17 no_subtype FALSE canonical NA NA 60 None 18 11 0 FALSE 0 0 NA A coding 947 2841 81 2921 PB.5009.1 chr8 - 2518 16 full-splice_match NBN ENST00000265433.7 4666 16 49 2099 no_subtype FALSE canonical NA NA 143 None 9 4 1 FALSE 0 0 NA C coding 754 2262 107 2368 PB.10621.1 chr22 + 2653 6 novel_not_in_catalog PEX26 novel NA NA NA NA no_subtype FALSE canonical NA NA 1542 None 2 7 0 TRUE 0 0 NA B coding 305 915 396 1310 PB.10621.2 chr22 + 3182 10 novel_not_in_catalog PEX26 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2904 None 8 11 3 TRUE 0 0 NA B coding 305 915 378 1292 PB.10621.3 chr22 + 3152 10 novel_not_in_catalog PEX26 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3067 None 4 11 3 TRUE 0 0 NA B coding 305 915 328 1242 PB.6329.1 chr11 - 2775 17 full-splice_match SSRP1 ENST00000278412.6 2819 17 34 10 no_subtype FALSE canonical NA NA 114 None 191 5 0 FALSE 0 0 NA C coding 709 2127 234 2360 PB.4835.1 chr8 - 3424 14 full-splice_match LOXL2 ENST00000389131.7 3549 14 121 4 no_subtype TRUE canonical NA NA 166 None 6 6 0 FALSE 0 0 NA A coding 774 2322 250 2571 PB.5208.1 chr9 + 2939 1 full-splice_match PLPP6 ENST00000381883.3 2944 1 10 -5 no_subtype FALSE canonical NA NA NA None 44 13 0 FALSE 0 0 NA C coding 295 885 52 936 PB.6329.4 chr11 - 2940 12 novel_in_catalog SSRP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 114 None 2 10 0 FALSE 0 0 NA C coding 494 1482 234 1715 PB.1123.1 chr1 + 2210 2 antisense novelGene_IRF2BP2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 24 None 7 14 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.1123.2 chr1 + 2602 1 antisense novelGene_IRF2BP2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1960.4 chr2 + 2933 14 novel_not_in_catalog SEPT2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2034 None 2 26 1 TRUE 0 0 NA C coding 361 1083 55 1137 PB.5188.1 chr8 + 2697 5 novel_not_in_catalog ZNF7 novel NA NA NA NA no_subtype FALSE canonical NA NA 836 None 2 5 0 FALSE 0 0 NA A coding 737 2211 437 2647 PB.1014.1 chr1 + 2115 10 full-splice_match CD55 ENST00000367064.7 2760 10 166 479 no_subtype FALSE canonical NA NA 1173 None 14 6 0 FALSE 0 0 NA C coding 381 1143 93 1235 PB.1513.1 chr2 - 4096 21 novel_not_in_catalog TBC1D8 novel NA NA NA NA no_subtype FALSE canonical NA NA 256 None 6 9 1 TRUE 0 0 NA A coding 959 2877 130 3006 PB.6268.1 chr11 - 2980 1 genic_intron novelGene_331 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3207.5 chr5 + 3672 12 incomplete-splice_match NIPBL ENST00000448238.2 8729 46 298 4759 3prime_fragment FALSE canonical NA NA 3474 None 20 0 0 FALSE 0 0 NA B coding 1167 3501 171 3671 PB.3207.4 chr5 + 2849 2 novel_in_catalog NIPBL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 405 None 3 21 0 FALSE 0 0 NA B coding 29 87 211 297 PB.3207.3 chr5 + 2524 1 novel_in_catalog NIPBL novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 22 21 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3207.2 chr5 + 4031 13 incomplete-splice_match NIPBL ENST00000448238.2 8729 46 -48 4746 3prime_fragment FALSE canonical NA NA 4018 None 4 2 0 FALSE 0 0 NA B coding 1171 3513 517 4029 PB.3207.1 chr5 + 1329 9 incomplete-splice_match NIPBL ENST00000448238.2 8729 46 94 7306 3prime_fragment FALSE canonical NA NA 1242 None 13 0 0 FALSE 0 0 NA B coding 318 954 375 1328 PB.3446.1 chr5 + 3252 7 novel_not_in_catalog PHAX novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2763 None 22 24 0 TRUE 0 0 NA B coding 394 1182 14 1195 PB.1445.2 chr2 + 3447 8 novel_in_catalog MAT2A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1071 None 22 11 0 FALSE 0 0 NA C coding 362 1086 121 1206 PB.3797.1 chr6 + 1925 2 full-splice_match HMGN4 ENST00000377575.2 1225 2 -25 -675 no_subtype FALSE canonical NA NA 122 None 93 4 0 FALSE 0 0 NA A coding 99 297 1511 1807 PB.3243.3 chr5 + 2614 2 full-splice_match PARP8 ENST00000513414.1 484 2 206 -2336 no_subtype FALSE canonical NA NA 220 None 2 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3124.1 chr4 - 3426 5 full-splice_match CBR4 ENST00000306193.7 3443 5 13 4 no_subtype FALSE canonical NA NA 298 None 2 32 0 FALSE 0 0 NA A coding 237 711 157 867 PB.510.1 chr1 + 2607 8 full-splice_match SLC35A3 ENST00000533028.6 14531 8 247 11677 no_subtype FALSE canonical NA NA 1032 None 45 11 0 FALSE 0 0 NA C coding 325 975 146 1120 PB.510.2 chr1 + 1684 8 full-splice_match SLC35A3 ENST00000370153.6 5708 8 99 3925 no_subtype FALSE canonical NA NA 1015 None 12 3 0 FALSE 0 0 NA C coding 367 1101 3 1103 PB.510.3 chr1 + 2680 9 novel_in_catalog SLC35A3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1105 None 3 12 2 FALSE 0 0 NA C coding 325 975 219 1193 PB.2332.1 chr3 - 3269 2 full-splice_match FILIP1L ENST00000383694.3 3280 2 3 8 no_subtype FALSE canonical NA NA 129 None 8 4 0 FALSE 0 0 NA A coding 893 2679 245 2923 PB.4376.26 chr7 - 5545 1 genic_intron novelGene_369 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A coding 101 303 1528 1830 PB.11077.1 chrX - 3227 3 novel_not_in_catalog XKRX novel NA NA NA NA no_subtype FALSE canonical NA NA 1449 None 2 10 0 FALSE 0 0 NA C coding 211 633 1115 1747 PB.8919.1 chr17 + 4267 28 full-splice_match PFAS ENST00000314666.10 5371 28 7 1097 no_subtype FALSE canonical NA NA 3832 None 2 6 0 FALSE 0 0 NA A coding 1338 4014 127 4140 PB.1526.1 chr2 + 2873 12 full-splice_match SLC9A2 ENST00000233969.2 5410 12 -136 2673 no_subtype FALSE canonical NA NA 2346 None 4 2 0 FALSE 0 0 NA A coding 812 2436 279 2714 PB.11077.2 chrX - 2685 3 full-splice_match XKRX ENST00000372956.2 2848 3 157 6 no_subtype FALSE canonical NA NA 783 None 8 2 0 FALSE 0 0 NA C coding 449 1347 449 1795 PB.8173.1 chr15 - 3545 1 antisense novelGene_SMAD3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA B coding 146 438 1088 1525 PB.929.2 chr1 + 1653 14 novel_not_in_catalog C1orf27 novel NA NA NA NA no_subtype FALSE canonical NA NA 1433 None 9 2 1 FALSE 0 0 NA B coding 354 1062 138 1199 PB.10623.2 chr22 - 2918 1 genic_intron novelGene_176 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.405.1 chr1 + 5468 35 full-splice_match PATJ ENST00000484562.5 5448 35 -35 15 no_subtype FALSE canonical NA NA 4610 None 3 10 0 FALSE 0 0 NA A coding 1552 4656 150 4805 PB.7813.2 chr14 - 5457 20 novel_not_in_catalog AREL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 175 None 2 13 1 TRUE 0 0 NA C coding 823 2469 531 2999 PB.8189.1 chr15 + 3009 2 novel_not_in_catalog THSD4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1436 None 13 26 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.3243.2 chr5 + 2920 26 full-splice_match PARP8 ENST00000281631.9 7177 26 28 4229 no_subtype FALSE canonical NA NA 2592 None 3 1 0 FALSE 0 0 NA C coding 852 2556 137 2692 PB.4200.1 chr6 - 3770 24 novel_not_in_catalog SYNE1 novel NA NA NA NA no_subtype TRUE canonical NA NA 236 None 2 0 0 FALSE 0 0 NA B coding 1247 3741 30 3770 PB.5075.1 chr8 - 1508 1 incomplete-splice_match RAD21 ENST00000297338.6 3749 14 2239 3 no_subtype FALSE canonical NA NA NA None 4 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5075.2 chr8 - 2477 14 full-splice_match RAD21 ENST00000297338.6 3749 14 118 1154 no_subtype FALSE canonical NA NA 138 None 108 0 0 FALSE 0 0 NA C coding 631 1893 171 2063 PB.2630.1 chr3 + 2906 7 novel_in_catalog FAM131A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1129 None 4 8 0 FALSE 0 0 NA C coding 366 1098 505 1602 PB.5456.1 chr9 - 2092 4 full-splice_match POLE3 ENST00000374169.7 2109 4 8 9 no_subtype FALSE canonical NA NA 147 None 30 15 0 FALSE 0 0 NA A coding 147 441 82 522 PB.8094.1 chr15 + 2906 2 genic_intron novelGene_523 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1096 None 3 20 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3116.1 chr4 - 2724 1 novel_in_catalog MARCH1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C coding 83 249 509 757 PB.382.1 chr1 + 5784 1 full-splice_match TCEANC2 ENST00000391366.3 1783 1 -3334 -667 no_subtype FALSE canonical NA NA NA None 2 36 0 FALSE 0 0 NA C coding 119 357 4106 4462 PB.9769.9 chr19 + 2617 15 novel_in_catalog DNM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1697 None 2 4 0 FALSE 0 0 NA C coding 539 1617 148 1764 PB.7813.1 chr14 - 5414 20 full-splice_match AREL1 ENST00000356357.8 5456 20 27 15 no_subtype FALSE canonical NA NA 156 None 7 9 0 FALSE 0 0 NA C coding 823 2469 490 2958 PB.9634.1 chr19 + 1515 10 full-splice_match WDR18 ENST00000585809.5 1608 10 76 17 no_subtype FALSE canonical NA NA 1174 None 47 0 0 FALSE 0 0 NA A coding 432 1296 8 1303 PB.4960.2 chr8 - 3144 1 genic_intron novelGene_639 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4960.3 chr8 - 3366 1 genic CPA6 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 23 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5015.4 chr8 - 1722 1 novel_in_catalog KIAA1429 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5015.3 chr8 - 5694 25 novel_not_in_catalog KIAA1429 novel NA NA NA NA no_subtype TRUE canonical NA NA 83 None 3 1 0 FALSE 0 0 NA C coding 1477 4431 1081 5511 PB.2956.2 chr4 - 1356 6 full-splice_match SNCA ENST00000394986.5 1420 6 -22 86 no_subtype TRUE canonical NA NA 419 None 33 6 0 FALSE 0 0 NA A coding 140 420 445 864 PB.419.4 chr1 + 2641 2 genic_intron novelGene_625 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 875 None 4 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3243.1 chr5 + 3007 27 full-splice_match PARP8 ENST00000505697.6 2747 27 6 -266 no_subtype TRUE canonical NA NA 2638 None 3 1 0 FALSE 0 0 NA C coding 852 2556 183 2738 PB.1104.1 chr1 - 3526 26 full-splice_match NUP133 ENST00000261396.5 5207 26 43 1638 no_subtype FALSE canonical NA NA 231 None 40 0 0 FALSE 0 0 NA C coding 1156 3468 50 3517 PB.419.1 chr1 + 2572 1 novel_in_catalog PDE4B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 57 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.419.2 chr1 + 3477 10 full-splice_match PDE4B ENST00000371045.9 3982 10 493 12 no_subtype FALSE canonical NA NA 1222 None 145 3 0 FALSE 0 0 NA C coding 517 1551 35 1585 PB.3506.1 chr5 + 6667 24 full-splice_match KDM3B ENST00000314358.9 6813 24 135 11 no_subtype FALSE canonical NA NA 5270 None 3 11 0 FALSE 0 0 NA A coding 1761 5283 66 5348 PB.5337.4 chr9 - 5832 1 genic_intron novelGene_729 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 57 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5539.1 chr9 - 1414 8 full-splice_match TRUB2 ENST00000372890.5 5719 8 290 4015 no_subtype FALSE canonical NA NA 153 None 10 5 0 FALSE 0 0 NA A coding 331 993 45 1037 PB.3763.1 chr6 - 3001 1 genic_intron novelGene_150 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10166.1 chr19 - 1367 2 novel_not_in_catalog LAIR1 novel NA NA NA NA no_subtype TRUE canonical NA NA 992 None 5 8 0 TRUE 0 0 NA A coding 40 120 273 392 PB.7148.3 chr12 - 2995 12 full-splice_match POC1B ENST00000313546.7 3001 12 -11 17 no_subtype FALSE canonical NA NA 155 None 21 9 0 FALSE 0 0 NA C coding 478 1434 141 1574 PB.933.1 chr1 + 1344 5 full-splice_match RGS1 ENST00000367459.7 1405 5 48 13 no_subtype FALSE canonical NA NA 462 None 9 2 0 FALSE 0 0 NA A coding 209 627 19 645 PB.10603.1 chr21 - 2833 16 full-splice_match ITGB2 ENST00000302347.9 2955 16 118 4 no_subtype FALSE canonical NA NA 112 None 164 3 0 FALSE 0 0 NA C coding 769 2307 116 2422 PB.7148.2 chr12 - 2740 12 novel_not_in_catalog POC1B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 119 None 2 18 3 TRUE 0 0 NA C coding 325 975 338 1312 PB.2475.1 chr3 - 2853 22 novel_not_in_catalog ACAD11 novel NA NA NA NA no_subtype FALSE canonical NA NA 215 None 25 3 0 TRUE 0 0 NA A coding 780 2340 67 2406 PB.5547.4 chr9 + 2742 2 genic SET novel NA NA NA NA no_subtype TRUE canonical NA NA 1865 None 5 23 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.7959.294 chr14 - 1472 5 novel_not_in_catalog IGHM novel NA NA NA NA no_subtype FALSE canonical NA NA 21 None 2 2 0 TRUE 0 0 NA B coding 375 1125 255 1379 PB.7959.295 chr14 - 1866 9 fusion IGHM,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 83 None 2 10 2 TRUE 0 0 NA B coding 375 1125 649 1773 PB.7959.293 chr14 - 1889 7 fusion IGHV4-34,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 12 15 1 TRUE 0 0 NA B coding 459 1377 411 1787 PB.7959.291 chr14 - 1918 8 fusion IGHV4-34,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 82 None 2 19 1 TRUE 0 0 NA B coding 595 1785 16 1800 PB.9431.3 chr17 - 1914 6 full-splice_match ACTG1 ENST00000331925.6 1994 6 72 8 no_subtype FALSE canonical NA NA 69 None 149 8 0 FALSE 0 0 NA C coding 375 1125 76 1200 PB.5312.1 chr9 + 1652 15 full-splice_match CBWD3 ENST00000360171.10 2165 15 502 11 no_subtype FALSE canonical NA NA 1130 None 10 8 0 FALSE 0 0 NA A coding 395 1185 50 1234 PB.11131.1 chrX - 1166 1 full-splice_match RNF113A ENST00000371442.3 1353 1 108 79 no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA A coding 343 1029 107 1135 PB.7148.7 chr12 - 2815 12 novel_not_in_catalog POC1B novel NA NA NA NA no_subtype FALSE canonical NA NA 143 None 11 7 0 TRUE 0 0 NA C coding 348 1044 347 1390 PB.7925.1 chr14 + 5589 1 genic_intron novelGene_927 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 34 0 FALSE 0 0 NA A coding 122 366 2325 2690 PB.2696.1 chr3 - 2738 1 antisense novelGene_FYTTD1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4207.2 chr6 - 2366 14 novel_not_in_catalog IPCEF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 132 None 3 4 0 TRUE 0 0 NA B coding 437 1311 150 1460 PB.5424.2 chr9 - 2761 5 full-splice_match KLF4 ENST00000374672.4 2813 5 47 5 no_subtype FALSE canonical NA NA 432 None 3 1 0 FALSE 0 0 NA A coding 470 1410 455 1864 PB.7031.2 chr12 + 1517 1 novel_in_catalog ESYT1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 24 3 0 FALSE 0 0 NA C coding 156 468 75 542 PB.7031.3 chr12 + 4043 30 novel_in_catalog ESYT1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 3199 None 2 8 1 FALSE 0 0 NA C coding 1054 3162 75 3236 PB.7031.1 chr12 + 3757 31 full-splice_match ESYT1 ENST00000394048.9 4388 31 627 4 no_subtype FALSE canonical NA NA 2912 None 261 3 0 FALSE 0 0 NA C coding 983 2949 1 2949 PB.3560.1 chr5 + 3559 12 novel_not_in_catalog SH3RF2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3128 None 2 6 2 TRUE 0 0 NA A coding 729 2187 246 2432 PB.4571.1 chr7 - 3642 10 fusion FIS1,CLDN15 novel NA NA NA NA no_subtype FALSE canonical NA NA 115 None 3 20 0 FALSE 0 0 NA A coding 228 684 2641 3324 PB.7031.4 chr12 + 4058 30 novel_in_catalog ESYT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3208 None 2 7 0 FALSE 0 0 NA C coding 1057 3171 75 3245 PB.3509.3 chr5 + 3345 18 novel_not_in_catalog CTNNA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2437 None 14 5 0 TRUE 0 0 NA B coding 906 2718 5 2722 PB.7320.2 chr12 - 5686 3 novel_not_in_catalog SPPL3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1029 None 2 47 2 TRUE 0 0 NA A non_coding NA NA NA NA PB.6349.2 chr11 - 1030 7 incomplete-splice_match MS4A6A ENST00000530839.5 1383 8 351 2 5prime_fragment FALSE canonical NA NA 128 None 13 2 1 FALSE 0 0 NA B coding 248 744 143 886 PB.6349.1 chr11 - 1418 8 novel_not_in_catalog MS4A6A novel NA NA NA NA no_subtype TRUE canonical NA NA 149 None 2 3 0 TRUE 0 0 NA B coding 248 744 164 907 PB.3611.1 chr5 - 1301 9 novel_not_in_catalog TIMD4 novel NA NA NA NA no_subtype TRUE canonical NA NA 86 None 29 5 0 FALSE 0 0 NA A coding 370 1110 29 1138 PB.3781.1 chr6 - 1934 7 full-splice_match TDP2 ENST00000378198.8 2071 7 134 3 no_subtype FALSE canonical NA NA 202 None 27 2 0 FALSE 0 0 NA A coding 362 1086 38 1123 PB.10434.21 chr20 - 2644 8 incomplete-splice_match ZNFX1 ENST00000371754.8 5235 15 353 2238 internal_fragment FALSE canonical NA NA 53 None 2 2 1 FALSE 0 0 NA C coding 847 2541 102 2642 PB.10434.20 chr20 - 2868 9 novel_not_in_catalog ZNFX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 37 None 26 1 0 FALSE 0 0 NA C coding 888 2664 205 2868 PB.9744.2 chr19 - 1618 3 full-splice_match FBXL12 ENST00000247977.8 1852 3 226 8 no_subtype FALSE canonical NA NA 102 None 7 1 0 FALSE 0 0 NA C coding 326 978 17 994 PB.9744.1 chr19 - 1790 3 full-splice_match FBXL12 ENST00000588922.5 1843 3 49 4 no_subtype FALSE canonical NA NA 274 None 2 4 0 FALSE 0 0 NA C coding 273 819 348 1166 PB.476.1 chr1 + 3264 3 full-splice_match LRRC8D ENST00000394593.7 3345 3 85 -4 no_subtype FALSE canonical NA NA 325 None 7 2 0 FALSE 0 0 NA C coding 858 2574 328 2901 PB.8964.5 chr17 + 3529 4 novel_in_catalog LGALS9C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2820 None 2 21 0 FALSE 0 0 NA C coding 131 393 2572 2964 PB.3570.4 chr5 + 3420 1 antisense novelGene_CSNK1A1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA B coding 176 528 2238 2765 PB.8964.1 chr17 + 1508 6 novel_not_in_catalog LGALS9C novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1295 None 2 5 0 TRUE 0 0 NA C coding 169 507 52 558 PB.8964.2 chr17 + 1530 10 full-splice_match LGALS9C ENST00000583322.5 1602 10 41 31 no_subtype FALSE canonical NA NA 843 None 2 6 0 FALSE 0 0 NA C coding 323 969 19 987 PB.3570.1 chr5 + 1407 1 antisense novelGene_CTB-89H12.4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10490.2 chr20 - 1890 14 novel_in_catalog UCKL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 163 None 3 12 0 FALSE 0 0 NA C coding 341 1023 51 1073 PB.10613.1 chr22 - 2861 1 full-splice_match LA16c-60G3.8 ENST00000417863.1 2260 1 234 -835 no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A coding 208 624 352 975 PB.7612.2 chr14 - 2274 12 novel_not_in_catalog SLC7A7 novel NA NA NA NA no_subtype FALSE canonical NA NA 62 None 2 5 0 FALSE 0 0 NA C coding 511 1533 356 1888 PB.11094.1 chrX - 1962 5 novel_not_in_catalog MORF4L2 novel NA NA NA NA no_subtype FALSE canonical NA NA 69 None 2 3 1 TRUE 0 0 NA C coding 288 864 286 1149 PB.5719.1 chr10 - 3880 13 novel_in_catalog ACBD5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 124 None 6 10 0 FALSE 0 0 NA C coding 532 1596 79 1674 PB.5719.3 chr10 - 3909 13 full-splice_match ACBD5 ENST00000396271.7 3921 13 3 9 no_subtype TRUE canonical NA NA 139 None 9 10 0 FALSE 0 0 NA C coding 525 1575 125 1699 PB.5527.2 chr9 - 2722 15 novel_not_in_catalog ENG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 368 None 2 8 0 FALSE 0 0 NA B coding 586 1758 302 2059 PB.5719.5 chr10 - 3924 14 novel_in_catalog ACBD5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 124 None 2 10 0 FALSE 0 0 NA C coding 536 1608 110 1717 PB.2237.1 chr3 - 3582 17 full-splice_match BAP1 ENST00000460680.5 3937 17 343 12 no_subtype TRUE canonical NA NA 166 None 30 5 0 FALSE 0 0 NA C coding 729 2187 130 2316 PB.81.2 chr1 + 1461 1 incomplete-splice_match SPEN ENST00000375759.7 12232 15 3522 7250 no_subtype FALSE canonical NA NA NA None 5 0 0 FALSE 0 0 NA A coding 421 1263 199 1461 PB.1534.3 chr2 + 2878 3 novel_in_catalog GCC2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 126 None 6 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5313.1 chr9 + 3359 3 genic_intron novelGene_644 novel NA NA NA NA no_subtype FALSE canonical NA NA 3266 None 4 25 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.8944.1 chr17 + 927 2 full-splice_match UBB ENST00000302182.7 1225 2 296 2 no_subtype FALSE canonical NA NA 90 None 105 2 0 FALSE 0 0 NA A coding 229 687 97 783 PB.10027.1 chr19 - 989 6 full-splice_match PAFAH1B3 ENST00000538771.5 1098 6 105 4 no_subtype FALSE canonical NA NA 236 None 2 2 0 FALSE 0 0 NA A coding 231 693 253 945 PB.8299.11 chr15 + 1518 1 incomplete-splice_match FURIN ENST00000610579.4 4191 16 2661 13 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10463.3 chr20 + 1888 3 full-splice_match VAPB ENST00000395802.7 1834 3 -59 5 no_subtype FALSE canonical NA NA 417 None 2 6 0 FALSE 0 0 NA C coding 99 297 207 503 PB.2441.1 chr3 - 1627 7 novel_not_in_catalog MUC13 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 86 None 3 14 4 TRUE 0 0 NA B coding 198 594 35 628 PB.2648.1 chr3 - 3981 13 full-splice_match ETV5 ENST00000306376.9 4111 13 111 19 no_subtype FALSE canonical NA NA 62 None 9 15 0 FALSE 0 0 NA A coding 510 1530 137 1666 PB.7285.1 chr12 - 5765 16 incomplete-splice_match MED13L ENST00000281928.7 14234 31 3007 5462 5prime_fragment FALSE canonical NA NA 196 None 8 6 0 FALSE 0 0 NA A coding 1262 3786 45 3830 PB.2348.4 chr3 + 2702 5 incomplete-splice_match NXPE3 ENST00000477909.5 3450 7 744 4 internal_fragment FALSE canonical NA NA 1286 None 6 5 0 FALSE 0 0 NA B coding 559 1677 158 1834 PB.4900.1 chr8 + 1363 10 full-splice_match VDAC3 ENST00000022615.8 1355 10 -16 8 no_subtype TRUE canonical NA NA 844 None 79 0 0 FALSE 0 0 NA A coding 283 849 85 933 PB.2348.2 chr3 + 2831 7 novel_in_catalog NXPE3 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1425 None 3 10 0 FALSE 0 0 NA B coding 484 1452 522 1973 PB.107.1 chr1 - 2679 4 novel_not_in_catalog MUL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 501 None 2 7 0 FALSE 0 0 NA C coding 316 948 490 1437 PB.107.2 chr1 - 2388 4 full-splice_match MUL1 ENST00000264198.4 2438 4 44 6 no_subtype FALSE canonical NA NA 213 None 2 7 0 FALSE 0 0 NA C coding 352 1056 94 1149 PB.2348.1 chr3 + 3144 8 novel_not_in_catalog NXPE3 novel NA NA NA NA no_subtype TRUE canonical NA NA 1723 None 20 11 0 FALSE 0 0 NA B coding 559 1677 595 2271 PB.6617.2 chr11 - 1356 11 fusion CARD16,CASP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 34 None 6 2 0 TRUE 0 0 NA B coding 404 1212 28 1239 PB.2767.1 chr4 - 3268 1 genic_intron novelGene_206 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4958.1 chr8 - 5769 32 incomplete-splice_match ARFGEF1 ENST00000262215.7 7225 39 1424 32 5prime_fragment TRUE canonical NA NA 169 None 2 7 0 FALSE 0 0 NA A coding 1415 4245 269 4513 PB.6526.1 chr11 + 2628 2 full-splice_match AP001372.2 ENST00000526036.1 2493 2 16 -151 no_subtype FALSE canonical NA NA 592 None 3 12 0 FALSE 0 0 NA A coding 349 1047 979 2025 PB.9764.1 chr19 - 1693 12 full-splice_match AP1M2 ENST00000250244.10 1749 12 54 2 no_subtype TRUE canonical NA NA 71 None 22 1 0 FALSE 0 0 NA A coding 423 1269 30 1298 PB.2328.1 chr3 - 2006 5 full-splice_match CLDND1 ENST00000341181.10 2161 5 136 19 no_subtype FALSE canonical NA NA 59 None 31 11 0 FALSE 0 0 NA A coding 253 759 78 836 PB.6641.2 chr11 - 2715 6 novel_not_in_catalog FDXACB1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 203 None 9 6 0 FALSE 0 0 NA C coding 247 741 32 772 PB.3488.1 chr5 - 1821 7 full-splice_match SAR1B ENST00000402673.6 6682 7 148 4713 no_subtype FALSE canonical NA NA 113 None 7 1 0 FALSE 0 0 NA A coding 198 594 132 725 PB.5294.1 chr9 - 3738 5 incomplete-splice_match RNF38 ENST00000353739.8 4945 11 1197 10 5prime_fragment FALSE canonical NA NA 22 None 2 31 1 FALSE 0 0 NA A coding 121 363 27 389 PB.1914.3 chr2 + 3271 25 full-splice_match PSMD1 ENST00000308696.10 3326 25 50 5 no_subtype FALSE canonical NA NA 2983 None 19 1 0 FALSE 0 0 NA C coding 953 2859 113 2971 PB.6815.1 chr12 + 3691 3 genic_intron novelGene_66 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1819 None 4 38 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8671.5 chr16 - 4079 1 novel_in_catalog FHOD1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA C coding 129 387 64 450 PB.8671.4 chr16 - 3815 22 full-splice_match FHOD1 ENST00000258201.8 3990 22 167 8 no_subtype FALSE canonical NA NA 282 None 11 5 0 FALSE 0 0 NA C coding 1164 3492 82 3573 PB.8671.1 chr16 - 3767 22 novel_not_in_catalog FHOD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 282 None 42 4 0 FALSE 0 0 NA C coding 1149 3447 82 3528 PB.3005.1 chr4 + 2630 2 full-splice_match C4orf32 ENST00000309733.5 8901 2 58 6213 no_subtype FALSE canonical NA NA 279 None 7 16 0 FALSE 0 0 NA A coding 132 396 127 522 PB.4650.1 chr7 + 2612 1 novel_in_catalog TSPAN33 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A coding 120 360 1680 2039 PB.2915.1 chr4 + 1432 1 antisense novelGene_LIN54_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5377.1 chr9 - 1802 3 novel_in_catalog C9orf129 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 596 None 2 8 1 FALSE 0 0 NA A coding 119 357 629 985 PB.6634.1 chr11 - 2585 1 incomplete-splice_match EXPH5 ENST00000265843.8 10187 6 7589 14 no_subtype FALSE canonical NA NA NA None 12 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1582.2 chr2 - 1826 6 novel_not_in_catalog POLR2D novel NA NA NA NA no_subtype FALSE non_canonical NA NA 73 None 4 12 2 TRUE 0 0 NA A coding 142 426 1 426 PB.5406.1 chr9 + 3244 1 intergenic novelGene_909 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11199.15 chrX - 1538 5 novel_in_catalog ARHGAP4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 104 None 5 4 0 FALSE 0 0 NA C coding 244 732 38 769 PB.7064.1 chr12 - 1349 8 full-splice_match CDK4 ENST00000257904.10 2076 8 189 538 no_subtype FALSE canonical NA NA 158 None 38 2 0 FALSE 0 0 NA A coding 303 909 178 1086 PB.5196.1 chr9 + 3493 6 novel_not_in_catalog SMARCA2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3233 None 7 17 2 TRUE 0 0 NA B coding 270 810 112 921 PB.5196.2 chr9 + 1763 1 novel_in_catalog SMARCA2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA B coding 56 168 186 353 PB.5196.3 chr9 + 3080 7 novel_not_in_catalog SMARCA2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2865 None 2 21 5 TRUE 0 0 NA B coding 167 501 17 517 PB.11234.1 chrY - 5266 28 novel_not_in_catalog KDM5D novel NA NA NA NA no_subtype FALSE canonical NA NA 58 None 4 17 2 TRUE 0 0 NA B coding 1539 4617 78 4694 PB.9396.3 chr17 + 5802 19 novel_not_in_catalog SEC14L1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5135 None 2 40 3 TRUE 0 0 NA C coding 632 1896 210 2105 PB.11234.2 chrY - 2875 18 novel_not_in_catalog KDM5D novel NA NA NA NA no_subtype FALSE canonical NA NA 53 None 3 2 0 TRUE 0 0 NA B coding 781 2343 73 2415 PB.4101.1 chr6 + 964 7 full-splice_match RWDD1 ENST00000466444.6 5522 7 148 4410 no_subtype FALSE canonical NA NA 678 None 2 2 0 FALSE 0 0 NA A coding 243 729 69 797 PB.122.1 chr1 - 5864 2 genic_intron novelGene_204 novel NA NA NA NA no_subtype FALSE canonical NA NA 2822 None 2 28 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3054.1 chr4 - 1747 1 genic_intron novelGene_1187 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7713.1 chr14 - 3621 6 novel_not_in_catalog CNIH1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 138 None 5 17 0 TRUE 0 0 NA C coding 144 432 58 489 PB.5725.1 chr10 + 2922 1 antisense novelGene_SVIL_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4341.1 chr7 - 1853 10 novel_not_in_catalog HIBADH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 164 None 28 8 0 TRUE 0 0 NA A coding 287 861 221 1081 PB.11199.14 chrX - 3547 19 novel_in_catalog ARHGAP4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 134 None 3 4 0 FALSE 0 0 NA C coding 506 1518 68 1585 PB.2496.1 chr3 - 3016 22 full-splice_match COPB2 ENST00000333188.9 3360 22 84 260 no_subtype FALSE canonical NA NA 101 None 304 1 0 FALSE 0 0 NA C coding 906 2718 99 2816 PB.10830.1 chr22 - 5723 27 novel_not_in_catalog CELSR1 novel NA NA NA NA no_subtype TRUE canonical NA NA 56 None 2 34 2 FALSE 0 0 NA A coding 1230 3690 12 3701 PB.1761.1 chr2 + 2885 6 full-splice_match NABP1 ENST00000425611.6 1878 6 -396 -611 no_subtype FALSE canonical NA NA 924 None 3 13 0 FALSE 0 0 NA C coding 204 612 480 1091 PB.8899.2 chr17 - 1770 8 full-splice_match TMEM256-PLSCR3 ENST00000535512.5 2067 8 290 7 no_subtype FALSE canonical NA NA 77 None 35 2 0 FALSE 0 0 NA A coding 295 885 235 1119 PB.7157.1 chr12 + 3310 5 novel_not_in_catalog NUDT4 novel NA NA NA NA no_subtype TRUE canonical NA NA 1641 None 2 24 1 TRUE 0 0 NA A coding 129 387 58 444 PB.163.1 chr1 + 688 3 full-splice_match SH3BGRL3 ENST00000270792.9 1661 3 971 2 no_subtype FALSE canonical NA NA 225 None 21 0 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9256.3 chr17 - 2699 1 novel_in_catalog VEZF1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4718.4 chr7 + 1649 3 novel_not_in_catalog AGK novel NA NA NA NA no_subtype FALSE canonical NA NA 321 None 7 4 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5345.20 chr9 - 2044 17 novel_not_in_catalog HNRNPK novel NA NA NA NA no_subtype FALSE canonical NA NA 107 None 2 6 1 FALSE 0 0 NA C coding 463 1389 215 1603 PB.9251.2 chr17 + 1941 10 incomplete-splice_match AKAP1 ENST00000337714.7 3970 11 1918 111 internal_fragment FALSE canonical NA NA 952 None 4 7 0 FALSE 0 0 NA C coding 341 1023 2 1024 PB.3039.1 chr4 + 2889 2 antisense novelGene_PGRMC2_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 2473 None 15 21 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8738.1 chr16 + 1613 7 full-splice_match PSMD7 ENST00000219313.8 1670 7 52 5 no_subtype FALSE canonical NA NA 618 None 22 6 0 FALSE 0 0 NA A coding 324 972 89 1060 PB.4361.2 chr7 - 3471 4 full-splice_match KBTBD2 ENST00000304056.8 3745 4 270 4 no_subtype FALSE canonical NA NA 92 None 16 3 0 FALSE 0 0 NA A coding 623 1869 431 2299 PB.1062.2 chr1 + 2964 23 full-splice_match MIA3 ENST00000340535.11 2735 23 84 -313 no_subtype FALSE canonical NA NA 2136 None 21 7 0 FALSE 0 0 NA C coding 785 2355 90 2444 PB.808.1 chr1 - 1946 6 full-splice_match MPZ ENST00000533357.4 1955 6 4 5 no_subtype FALSE canonical NA NA 130 None 2 12 0 FALSE 0 0 NA A coding 258 774 34 807 PB.9389.2 chr17 - 1778 10 novel_not_in_catalog ST6GALNAC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 170 None 3 14 2 FALSE 0 0 NA C coding 332 996 46 1041 PB.9389.3 chr17 - 1651 9 full-splice_match ST6GALNAC2 ENST00000225276.9 2170 9 266 253 no_subtype TRUE canonical NA NA 179 None 2 4 0 FALSE 0 0 NA C coding 374 1122 55 1176 PB.2777.2 chr4 - 1508 5 incomplete-splice_match SEL1L3 ENST00000264868.9 4369 24 2853 8 5prime_fragment FALSE canonical NA NA 80 None 2 3 0 FALSE 0 0 NA A coding 159 477 45 521 PB.9389.1 chr17 - 2957 2 genic ST6GALNAC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 363 None 3 26 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.3019.1 chr4 + 4281 2 incomplete-splice_match SYNPO2 ENST00000429713.6 9920 4 1187 4452 internal_fragment FALSE canonical NA NA 64 None 7 9 0 FALSE 0 0 NA B coding 698 2094 181 2274 PB.5739.1 chr10 - 3660 16 full-splice_match ITGB1 ENST00000302278.7 3640 16 -32 12 no_subtype FALSE canonical NA NA 97 None 325 4 0 FALSE 0 0 NA C coding 798 2394 98 2491 PB.6641.1 chr11 - 2775 5 full-splice_match FDXACB1 ENST00000260257.8 2789 5 12 2 no_subtype TRUE canonical NA NA 208 None 2 11 0 FALSE 0 0 NA C coding 624 1872 37 1908 PB.5739.4 chr10 - 2982 1 novel_in_catalog ITGB1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 13 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1253.1 chr2 + 2719 1 genic_intron novelGene_290 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3426.1 chr5 - 2976 2 full-splice_match TICAM2 ENST00000427199.2 3049 2 0 73 no_subtype FALSE canonical NA NA 383 None 17 18 0 FALSE 0 0 NA A coding 235 705 443 1147 PB.284.2 chr1 - 2872 9 novel_not_in_catalog PPIEL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 40 None 2 16 1 TRUE 0 0 NA A coding 117 351 385 735 PB.9251.3 chr17 + 6168 8 novel_not_in_catalog AKAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 4581 None 3 31 0 TRUE 0 0 NA C coding 246 738 2265 3002 PB.5967.8 chr10 - 3463 21 full-splice_match CHUK ENST00000370397.7 3625 21 91 71 no_subtype FALSE canonical NA NA 101 None 8 8 1 FALSE 0 0 NA C coding 729 2187 45 2231 PB.5967.9 chr10 - 3485 21 novel_not_in_catalog CHUK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 135 None 3 6 0 TRUE 0 0 NA C coding 722 2166 31 2196 PB.3508.1 chr5 - 2335 17 full-splice_match HSPA9 ENST00000297185.7 3321 17 34 952 no_subtype TRUE canonical NA NA 173 None 240 2 0 FALSE 0 0 NA A coding 679 2037 93 2129 PB.5901.6 chr10 + 2993 3 genic_intron novelGene_815 novel NA NA NA NA no_subtype TRUE canonical NA NA 2499 None 9 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9153.1 chr17 + 2764 8 novel_in_catalog TMEM106A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 717 None 6 15 0 FALSE 0 0 NA A coding 262 786 50 835 PB.3.1 chr1 + 2420 7 novel_in_catalog AGRN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 750 None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5967.1 chr10 - 2790 25 novel_not_in_catalog CWF19L1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 103 None 4 20 8 TRUE 0 0 NA A coding 538 1614 81 1694 PB.7676.1 chr14 - 2013 5 full-splice_match KLHL28 ENST00000396128.8 6545 5 14 4518 no_subtype FALSE canonical NA NA 106 None 6 2 0 FALSE 0 0 NA A coding 571 1713 107 1819 PB.3888.1 chr6 - 1533 4 full-splice_match PPIL1 ENST00000373699.5 1739 4 198 8 no_subtype FALSE canonical NA NA 110 None 25 8 0 FALSE 0 0 NA A coding 166 498 55 552 PB.6038.4 chr10 + 2941 2 antisense novelGene_ABLIM1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 21 None 4 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4115.1 chr6 + 2714 8 novel_not_in_catalog HINT3 novel NA NA NA NA no_subtype TRUE canonical NA NA 2409 None 61 15 2 TRUE 0 0 NA B coding 182 546 36 581 PB.3427.1 chr5 - 1559 5 full-splice_match CDO1 ENST00000250535.4 1860 5 297 4 no_subtype FALSE canonical NA NA 430 None 2 5 0 FALSE 0 0 NA A coding 200 600 261 860 PB.7164.2 chr12 + 6855 2 genic_intron novelGene_857 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3690 None 3 33 1 FALSE 0 0 NA A coding 168 504 1152 1655 PB.1554.2 chr2 + 5150 17 novel_not_in_catalog PSD4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3084 None 2 28 4 FALSE 0 0 NA B coding 1048 3144 196 3339 PB.1429.1 chr2 + 1724 9 novel_not_in_catalog WDR54 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1548 None 3 3 0 FALSE 0 0 NA A coding 239 717 961 1677 PB.6274.1 chr11 - 1592 1 antisense novelGene_RP1-68D18.2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5663.3 chr10 + 1414 11 novel_in_catalog RBM17 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1123 None 2 0 0 FALSE 0 0 NA C coding 401 1203 22 1224 PB.1574.4 chr2 - 1768 14 novel_not_in_catalog BIN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 47 None 2 5 0 TRUE 0 0 NA B coding 326 978 36 1013 PB.5663.2 chr10 + 3277 10 novel_in_catalog RBM17 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2865 None 2 10 1 FALSE 0 0 NA C coding 318 954 151 1104 PB.3874.3 chr6 - 1887 11 novel_not_in_catalog FKBP5 novel NA NA NA NA no_subtype FALSE canonical NA NA 112 None 4 4 1 FALSE 0 0 NA B coding 278 834 673 1506 PB.3874.2 chr6 - 1996 2 novel_not_in_catalog FKBP5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 303 None 4 10 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.4001.1 chr6 - 3419 22 incomplete-splice_match PHIP ENST00000275034.4 10460 40 2335 4706 5prime_fragment FALSE canonical NA NA 34 None 2 1 0 FALSE 0 0 NA B coding 862 2586 711 3296 PB.4355.2 chr7 + 2565 18 novel_in_catalog GARS novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2283 None 3 9 0 FALSE 0 0 NA C coding 616 1848 559 2406 PB.3728.2 chr6 + 1814 17 full-splice_match RIOK1 ENST00000379834.6 2810 17 319 677 no_subtype FALSE canonical NA NA 1784 None 7 4 0 FALSE 0 0 NA C coding 542 1626 189 1814 PB.3728.1 chr6 + 1780 16 incomplete-splice_match RIOK1 ENST00000379834.6 2810 17 311 719 3prime_fragment TRUE canonical NA NA 1639 None 2 7 0 FALSE 0 0 NA C coding 528 1584 197 1780 PB.4355.1 chr7 + 2463 17 full-splice_match GARS ENST00000389266.7 2634 17 162 9 no_subtype FALSE canonical NA NA 2173 None 7 4 0 FALSE 0 0 NA C coding 739 2217 80 2296 PB.3929.5 chr6 + 2873 17 novel_not_in_catalog PPP2R5D novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1684 None 10 5 0 TRUE 0 0 NA C coding 570 1710 110 1819 PB.3929.6 chr6 + 2866 16 full-splice_match PPP2R5D ENST00000485511.5 3044 16 172 6 no_subtype FALSE canonical NA NA 1678 None 6 5 1 FALSE 0 0 NA C coding 602 1806 8 1813 PB.3929.7 chr6 + 2853 4 novel_not_in_catalog PPP2R5D novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2569 None 5 11 0 TRUE 0 0 NA C coding 197 591 1143 1733 PB.5977.3 chr10 + 2743 5 novel_in_catalog LZTS2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1401 None 71 1 0 FALSE 0 0 NA C coding 669 2007 76 2082 PB.5603.1 chr9 - 1563 6 full-splice_match SURF4 ENST00000371989.7 2984 6 -2 1423 no_subtype FALSE canonical NA NA 180 None 200 6 0 FALSE 0 0 NA A coding 269 807 133 939 PB.5977.1 chr10 + 2783 5 full-splice_match LZTS2 ENST00000370223.7 2883 5 59 41 no_subtype FALSE canonical NA NA 1472 None 21 0 0 FALSE 0 0 NA C coding 669 2007 147 2153 PB.7959.186 chr14 - 1559 10 fusion IGHV5-51,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 103 None 3 13 5 TRUE 0 0 NA B coding 196 588 837 1424 PB.10246.9 chr20 + 2689 15 novel_in_catalog CDC25B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1405 None 2 3 0 FALSE 0 0 NA C coding 468 1404 140 1543 PB.10246.8 chr20 + 3168 16 novel_not_in_catalog CDC25B novel NA NA NA NA no_subtype FALSE canonical NA NA 1876 None 8 15 1 TRUE 0 0 NA C coding 598 1794 221 2014 PB.1101.2 chr1 + 1396 8 novel_in_catalog RAB4A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 831 None 2 4 0 FALSE 0 0 NA C coding 113 339 478 816 PB.2862.2 chr4 + 1426 6 novel_not_in_catalog FDCSP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 369 None 2 8 2 TRUE 0 0 NA B coding 85 255 57 311 PB.10246.5 chr20 + 3162 17 novel_not_in_catalog CDC25B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1875 None 2 15 2 TRUE 0 0 NA C coding 292 876 1138 2013 PB.10246.4 chr20 + 3064 16 novel_not_in_catalog CDC25B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1775 None 2 8 1 TRUE 0 0 NA C coding 346 1038 876 1913 PB.10368.2 chr20 - 2027 2 full-splice_match BLCAP ENST00000373537.6 2073 2 36 10 no_subtype FALSE canonical NA NA 103 None 29 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10246.6 chr20 + 3175 15 novel_in_catalog CDC25B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1887 None 7 12 0 FALSE 0 0 NA C coding 601 1803 223 2025 PB.10246.1 chr20 + 2943 17 novel_not_in_catalog CDC25B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1651 None 9 3 0 FALSE 0 0 NA C coding 575 1725 65 1789 PB.10246.2 chr20 + 2926 16 full-splice_match CDC25B ENST00000439880.6 3096 16 163 7 no_subtype FALSE canonical NA NA 1638 None 67 4 0 FALSE 0 0 NA C coding 566 1698 79 1776 PB.1471.1 chr2 - 3009 1 genic_intron novelGene_798 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5560.1 chr9 - 2749 14 full-splice_match CRAT ENST00000318080.6 2763 14 23 -9 no_subtype FALSE canonical NA NA 299 None 25 9 0 FALSE 0 0 NA C coding 626 1878 273 2150 PB.5361.2 chr9 + 2550 14 full-splice_match SYK ENST00000375754.8 5005 14 38 2417 no_subtype FALSE canonical NA NA 1945 None 159 2 0 FALSE 0 0 NA C coding 635 1905 111 2015 PB.5361.3 chr9 + 2883 2 novel_in_catalog SYK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 81 None 3 8 0 FALSE 0 0 NA C coding 180 540 123 662 PB.5361.4 chr9 + 2617 13 full-splice_match SYK ENST00000375751.8 4936 13 54 2265 no_subtype FALSE canonical NA NA 1860 None 16 4 0 FALSE 0 0 NA C coding 612 1836 95 1930 PB.5361.5 chr9 + 1760 3 novel_in_catalog SYK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 533 None 15 3 0 FALSE 0 0 NA C coding 193 579 117 695 PB.5361.6 chr9 + 2663 14 novel_not_in_catalog SYK novel NA NA NA NA no_subtype FALSE canonical NA NA 2003 None 2 3 0 FALSE 0 0 NA C coding 293 879 1195 2073 PB.8496.1 chr16 - 2777 1 incomplete-splice_match GGA2 ENST00000309859.8 5973 17 2413 784 no_subtype FALSE canonical NA NA NA None 8 13 0 FALSE 0 0 NA C coding 94 282 128 409 PB.5361.8 chr9 + 2748 14 novel_in_catalog SYK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1990 None 12 6 1 FALSE 0 0 NA C coding 635 1905 156 2060 PB.1839.1 chr2 + 2982 3 novel_not_in_catalog SPAG16 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 307 None 2 17 0 FALSE 0 0 NA A coding 134 402 57 458 PB.444.2 chr1 - 2557 1 novel_in_catalog FUBP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8726.1 chr16 - 2794 6 novel_not_in_catalog ZNF23 novel NA NA NA NA no_subtype FALSE canonical NA NA 33 None 2 4 0 TRUE 0 0 NA A coding 647 1941 369 2309 PB.444.1 chr1 - 1632 2 novel_not_in_catalog FUBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1516 None 2 8 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.6686.8 chr11 + 1451 14 full-splice_match HMBS ENST00000537841.5 1559 14 139 -31 no_subtype FALSE canonical NA NA 1013 None 2 2 1 FALSE 0 0 NA C coding 344 1032 153 1184 PB.8647.2 chr16 + 1898 8 novel_not_in_catalog USB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1090 None 12 13 0 TRUE 0 0 NA B coding 265 795 46 840 PB.10985.1 chrX - 942 6 full-splice_match HSD17B10 ENST00000168216.10 960 6 10 8 no_subtype FALSE canonical NA NA 45 None 4 0 0 FALSE 0 0 NA A coding 261 783 19 801 PB.1158.2 chr1 - 2641 14 full-splice_match HNRNPU ENST00000444376.6 5940 14 56 3243 no_subtype FALSE canonical NA NA 813 None 92 0 0 FALSE 0 0 NA C coding 806 2418 180 2597 PB.10472.1 chr20 - 771 7 full-splice_match PSMA7 ENST00000370873.8 996 7 47 178 no_subtype TRUE canonical NA NA 176 None 6 3 0 FALSE 0 0 NA A coding 230 690 81 770 PB.1019.15 chr1 + 2801 2 novel_not_in_catalog CD46 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2600 None 2 31 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.9665.1 chr19 + 2058 7 full-splice_match GNA15 ENST00000262958.3 2133 7 49 26 no_subtype FALSE canonical NA NA 1107 None 2 4 0 FALSE 0 0 NA A coding 374 1122 210 1331 PB.2715.1 chr4 - 1927 6 full-splice_match TNIP2 ENST00000315423.11 1974 6 40 7 no_subtype FALSE canonical NA NA 323 None 2 7 0 FALSE 0 0 NA A coding 429 1287 48 1334 PB.46.9 chr1 + 6033 20 novel_not_in_catalog PIK3CD novel NA NA NA NA no_subtype FALSE canonical NA NA 4033 None 2 24 0 FALSE 0 0 NA C coding 478 1434 210 1643 PB.46.8 chr1 + 5209 24 full-splice_match PIK3CD ENST00000377346.8 5203 24 -9 3 no_subtype FALSE canonical NA NA 3201 None 30 18 0 FALSE 0 0 NA C coding 1044 3132 205 3336 PB.46.7 chr1 + 5743 22 novel_in_catalog PIK3CD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3740 None 2 50 0 FALSE 0 0 NA C coding 436 1308 1219 2526 PB.46.6 chr1 + 5569 23 novel_in_catalog PIK3CD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3567 None 7 18 0 FALSE 0 0 NA C coding 828 2484 1219 3702 PB.46.5 chr1 + 5919 21 novel_not_in_catalog PIK3CD novel NA NA NA NA no_subtype FALSE canonical NA NA 3931 None 2 25 2 FALSE 0 0 NA C coding 390 1170 2897 4066 PB.46.4 chr1 + 5576 22 novel_in_catalog PIK3CD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3574 None 2 20 0 FALSE 0 0 NA C coding 604 1812 210 2021 PB.46.2 chr1 + 5866 25 novel_not_in_catalog PIK3CD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3849 None 2 22 2 TRUE 0 0 NA C coding 1044 3132 853 3984 PB.46.1 chr1 + 5538 27 novel_not_in_catalog PIK3CD novel NA NA NA NA no_subtype FALSE canonical NA NA 3538 None 2 18 0 TRUE 0 0 NA C coding 1044 3132 542 3673 PB.3570.3 chr5 + 3405 2 antisense novelGene_CSNK1A1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 66 None 3 21 1 FALSE 0 0 NA B coding 176 528 2220 2747 PB.7344.1 chr12 - 2058 1 full-splice_match HCAR2 ENST00000328880.5 2051 1 -11 4 no_subtype FALSE canonical NA NA NA None 11 2 0 FALSE 0 0 NA A coding 363 1089 72 1160 PB.9450.4 chr17 - 5916 29 incomplete-splice_match FASN ENST00000306749.3 8565 43 2621 28 5prime_fragment FALSE canonical NA NA 18 None 2 15 0 FALSE 0 0 NA B coding 1482 4446 686 5131 PB.5081.1 chr8 + 2685 7 novel_not_in_catalog MAL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1684 None 8 21 3 TRUE 0 0 NA A coding 176 528 20 547 PB.3802.1 chr6 - 2670 9 novel_not_in_catalog TRIM27 novel NA NA NA NA no_subtype TRUE canonical NA NA 485 None 112 2 0 TRUE 0 0 NA B coding 513 1539 66 1604 PB.3802.2 chr6 - 2729 8 novel_not_in_catalog TRIM27 novel NA NA NA NA no_subtype TRUE canonical NA NA 773 None 6 2 0 TRUE 0 0 NA B coding 436 1308 354 1661 PB.3802.3 chr6 - 1592 4 novel_in_catalog TRIM27 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 779 None 5 4 0 FALSE 0 0 NA B coding 263 789 360 1148 PB.1656.2 chr2 - 2688 14 novel_in_catalog BAZ2B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 209 None 2 1 0 FALSE 0 0 NA B coding 811 2433 255 2687 PB.1308.1 chr2 + 3284 6 full-splice_match PPM1B ENST00000378551.6 3877 6 -2 595 no_subtype TRUE canonical NA NA 1548 None 19 2 0 FALSE 0 0 NA C coding 387 1161 415 1575 PB.3636.14 chr5 + 5739 1 genic_intron novelGene_1300 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 16 32 0 FALSE 0 0 NA A coding 116 348 2204 2551 PB.5905.1 chr10 + 3824 3 novel_not_in_catalog IFIT5 novel NA NA NA NA no_subtype TRUE canonical NA NA 3358 None 8 20 1 TRUE 0 0 NA C coding 482 1446 54 1499 PB.9270.1 chr17 + 3561 18 full-splice_match DHX40 ENST00000251241.8 3660 18 94 5 no_subtype FALSE canonical NA NA 2253 None 19 5 0 FALSE 0 0 NA A coding 779 2337 54 2390 PB.5905.3 chr10 + 1512 1 novel_in_catalog IFIT5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4697.1 chr7 + 4186 1 antisense novelGene_CREB3L2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA A coding 104 312 3475 3786 PB.2061.3 chr3 - 3133 22 novel_in_catalog SLC4A7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 121 None 2 7 1 FALSE 0 0 NA B coding 1024 3072 62 3133 PB.2061.1 chr3 - 3274 22 incomplete-splice_match SLC4A7 ENST00000437179.5 3667 24 8 385 internal_fragment FALSE canonical NA NA 261 None 5 4 1 FALSE 0 0 NA B coding 1020 3060 214 3273 PB.7612.3 chr14 - 2247 11 full-splice_match SLC7A7 ENST00000555702.5 2272 11 20 5 no_subtype FALSE canonical NA NA 154 None 3 3 0 FALSE 0 0 NA C coding 511 1533 329 1861 PB.7895.8 chr14 - 6121 1 intergenic novelGene_867 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 43 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6759.1 chr12 - 2035 5 novel_not_in_catalog CACNA2D4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 64 None 2 14 1 TRUE 0 0 NA A coding 53 159 204 362 PB.2769.1 chr4 - 894 1 full-splice_match CDC42P6 ENST00000421246.1 576 1 -70 -248 no_subtype FALSE canonical NA NA NA None 10 1 0 FALSE 0 0 NA A coding 191 573 71 643 PB.1573.1 chr2 - 1574 7 full-splice_match NIFK ENST00000285814.8 1734 7 51 109 no_subtype FALSE canonical NA NA 127 None 8 3 0 FALSE 0 0 NA A coding 293 879 23 901 PB.10521.1 chr21 - 2020 1 full-splice_match CLDN8 ENST00000399899.1 2068 1 46 2 no_subtype FALSE canonical NA NA NA None 5 6 0 FALSE 0 0 NA C coding 225 675 103 777 PB.2290.1 chr3 + 1545 1 full-splice_match PSMC1P1 ENST00000478110.1 1320 1 -12 -213 no_subtype FALSE canonical NA NA NA None 3 1 0 FALSE 0 0 NA C coding 294 882 13 894 PB.10372.5 chr20 - 3227 11 novel_not_in_catalog TGM2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 82 None 2 10 0 FALSE 0 0 NA C coding 579 1737 73 1809 PB.10372.4 chr20 - 3176 13 novel_not_in_catalog TGM2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 82 None 2 7 0 TRUE 0 0 NA C coding 674 2022 73 2094 PB.7895.2 chr14 - 3015 1 incomplete-splice_match SYNE3 ENST00000557275.5 13488 17 2852 7622 no_subtype FALSE canonical NA NA NA None 2 30 0 FALSE 0 0 NA B coding 127 381 958 1338 PB.7895.3 chr14 - 5942 18 novel_not_in_catalog SYNE3 novel NA NA NA NA no_subtype FALSE canonical NA NA 62 None 6 10 0 TRUE 0 0 NA B coding 975 2925 77 3001 PB.10372.1 chr20 - 1867 1 incomplete-splice_match TGM2 ENST00000469269.1 3467 3 1596 5 no_subtype FALSE canonical NA NA NA None 4 6 0 FALSE 0 0 NA C coding 22 66 249 314 PB.10372.3 chr20 - 3889 13 full-splice_match TGM2 ENST00000361475.6 5070 13 102 1079 no_subtype FALSE canonical NA NA 82 None 198 11 0 FALSE 0 0 NA C coding 687 2061 73 2133 PB.111.1 chr1 - 3987 13 novel_in_catalog HP1BP3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 116 None 24 17 0 FALSE 0 0 NA A coding 553 1659 217 1875 PB.2552.1 chr3 + 3603 1 genic_intron novelGene_1267 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5604.1 chr9 - 2860 6 novel_not_in_catalog REXO4 novel NA NA NA NA no_subtype TRUE canonical NA NA 376 None 2 17 0 TRUE 0 0 NA A coding 194 582 152 733 PB.1668.1 chr2 - 2661 26 full-splice_match FAP ENST00000188790.8 2780 26 120 -1 no_subtype FALSE canonical NA NA 94 None 2 2 0 FALSE 0 0 NA A coding 760 2280 89 2368 PB.6918.1 chr12 - 2736 1 incomplete-splice_match SLC38A1 ENST00000398637.9 8066 17 5324 7 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2456.1 chr3 - 1701 1 novel_in_catalog RPN1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA C coding 215 645 16 660 PB.10721.1 chr22 + 2861 4 full-splice_match ISX ENST00000308700.6 3384 4 519 4 no_subtype FALSE canonical NA NA 931 None 16 11 0 FALSE 0 0 NA C coding 245 735 434 1168 PB.2783.1 chr4 - 1522 1 genic_intron novelGene_341 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10721.2 chr22 + 3041 5 novel_not_in_catalog ISX novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1112 None 8 11 0 FALSE 0 0 NA C coding 245 735 615 1349 PB.2075.1 chr3 - 2749 1 antisense novelGene_OSBPL10-AS1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6530.1 chr11 + 5448 4 novel_not_in_catalog NEU3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3402 None 2 32 1 TRUE 0 0 NA A coding 428 1284 63 1346 PB.7555.3 chr13 + 2862 5 novel_in_catalog TM9SF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 572 None 2 19 0 FALSE 0 0 NA C coding 200 600 112 711 PB.8587.2 chr16 - 2838 13 full-splice_match SHCBP1 ENST00000303383.7 3461 13 248 375 no_subtype TRUE canonical NA NA 122 None 16 2 0 FALSE 0 0 NA C coding 672 2016 20 2035 PB.34.1 chr1 + 3592 4 full-splice_match PHF13 ENST00000377648.4 3681 4 66 23 no_subtype FALSE canonical NA NA 992 None 6 11 0 FALSE 0 0 NA A coding 300 900 317 1216 PB.2264.5 chr3 + 2888 9 novel_in_catalog SLMAP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1018 None 3 7 0 FALSE 0 0 NA C coding 321 963 146 1108 PB.2509.3 chr3 - 3088 3 full-splice_match XRN1 ENST00000470537.1 669 3 8 -2427 no_subtype FALSE canonical NA NA 150 None 3 22 0 FALSE 0 0 NA C coding 203 609 76 684 PB.4626.3 chr7 + 2632 1 genic_intron novelGene_1034 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2264.4 chr3 + 2985 10 novel_in_catalog SLMAP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1115 None 7 7 0 FALSE 0 0 NA C coding 318 954 153 1106 PB.4411.1 chr7 - 2719 13 novel_not_in_catalog MYO1G novel NA NA NA NA no_subtype FALSE canonical NA NA 136 None 2 8 0 TRUE 0 0 NA C coding 654 1962 42 2003 PB.4411.2 chr7 - 3177 22 full-splice_match MYO1G ENST00000258787.11 3267 22 74 16 no_subtype FALSE canonical NA NA 158 None 118 0 0 FALSE 0 0 NA C coding 1018 3054 64 3117 PB.4411.4 chr7 - 3700 19 novel_in_catalog MYO1G novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 47 None 2 3 0 FALSE 0 0 NA C coding 757 2271 145 2415 PB.8704.2 chr16 - 2800 3 full-splice_match CHTF8 ENST00000519520.5 856 3 -4 -1940 no_subtype FALSE canonical NA NA 105 None 51 4 0 FALSE 0 0 NA C coding 423 1269 688 1956 PB.8704.3 chr16 - 1317 5 novel_in_catalog CHTF8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 84 None 4 3 0 FALSE 0 0 NA C coding 121 363 120 482 PB.3748.1 chr6 + 1570 8 novel_not_in_catalog NOL7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 704 None 9 5 1 TRUE 0 0 NA A coding 118 354 60 413 PB.5866.1 chr10 - 5598 33 novel_not_in_catalog POLR3A novel NA NA NA NA no_subtype TRUE canonical NA NA 150 None 33 8 0 TRUE 0 0 NA B coding 1390 4170 107 4276 PB.5866.2 chr10 - 3017 22 novel_not_in_catalog POLR3A novel NA NA NA NA no_subtype FALSE canonical NA NA 160 None 2 0 0 TRUE 0 0 NA B coding 946 2838 117 2954 PB.10529.1 chr21 - 1522 5 full-splice_match MIS18A ENST00000290130.3 1575 5 33 20 no_subtype FALSE canonical NA NA 356 None 5 11 0 FALSE 0 0 NA C coding 170 510 212 721 PB.1437.2 chr2 + 4225 18 novel_not_in_catalog HK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2789 None 2 16 1 FALSE 0 0 NA B coding 949 2847 85 2931 PB.9206.1 chr17 + 2128 7 full-splice_match SNX11 ENST00000359238.6 2315 7 185 2 no_subtype FALSE canonical NA NA 621 None 3 5 0 FALSE 0 0 NA A coding 270 810 83 892 PB.6357.1 chr11 - 1597 8 full-splice_match SLC15A3 ENST00000227880.7 2115 8 513 5 no_subtype FALSE canonical NA NA 279 None 3 4 0 FALSE 0 0 NA A coding 448 1344 121 1464 PB.2756.3 chr4 + 5388 9 novel_not_in_catalog CD38 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5183 None 12 27 0 TRUE 0 0 NA C coding 300 900 87 986 PB.5135.1 chr8 - 3130 1 incomplete-splice_match ST3GAL1 ENST00000399640.3 6764 10 3628 7 no_subtype FALSE canonical NA NA NA None 14 24 0 FALSE 0 0 NA C coding 132 396 2030 2425 PB.8663.1 chr16 - 1398 1 novel_in_catalog FAM96B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1203.1 chr2 - 1902 3 full-splice_match OSR1 ENST00000272223.2 1936 3 31 3 no_subtype FALSE canonical NA NA 282 None 3 4 0 FALSE 0 0 NA A coding 266 798 315 1112 PB.8075.2 chr15 + 5528 10 novel_not_in_catalog GALK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4115 None 2 16 0 TRUE 0 0 NA C coding 390 1170 75 1244 PB.8075.1 chr15 + 1801 10 full-splice_match GALK2 ENST00000560031.5 2043 10 231 11 no_subtype FALSE canonical NA NA 1245 None 8 0 0 FALSE 0 0 NA C coding 458 1374 77 1450 PB.3455.7 chr5 + 3506 8 novel_not_in_catalog CDC42SE2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1484 None 3 27 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.10169.1 chr19 - 3883 20 full-splice_match PTPRH ENST00000376350.7 3877 20 -10 4 no_subtype TRUE canonical NA NA 84 None 11 6 0 FALSE 0 0 NA A coding 1115 3345 34 3378 PB.3455.2 chr5 + 1527 7 novel_not_in_catalog CDC42SE2 novel NA NA NA NA no_subtype FALSE canonical NA NA 791 None 15 11 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.3455.3 chr5 + 2871 8 novel_not_in_catalog CDC42SE2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1528 None 18 21 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.3455.8 chr5 + 1447 7 novel_not_in_catalog CDC42SE2 novel NA NA NA NA no_subtype FALSE canonical NA NA 800 None 4 10 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.4692.1 chr7 + 6236 43 full-splice_match NUP205 ENST00000285968.10 6266 43 12 18 no_subtype FALSE canonical NA NA 5900 None 20 1 0 FALSE 0 0 NA A coding 2012 6036 15 6050 PB.2566.3 chr3 - 1389 10 novel_not_in_catalog PDCD10 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 166 None 2 3 0 TRUE 0 0 NA C coding 210 630 362 991 PB.2616.1 chr3 + 3878 1 incomplete-splice_match B3GNT5 ENST00000326505.3 4123 2 229 17 no_subtype FALSE canonical NA NA NA None 18 21 0 FALSE 0 0 NA B coding 336 1008 428 1435 PB.5884.1 chr10 + 3233 1 genic_intron novelGene_788 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.445.2 chr1 + 1669 9 full-splice_match IFI44 ENST00000370747.8 1687 9 1 17 no_subtype FALSE canonical NA NA 1372 None 26 4 1 FALSE 0 0 NA C coding 444 1332 85 1416 PB.632.1 chr1 - 1420 1 genic_intron novelGene_1226 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.929.1 chr1 + 3351 2 genic C1orf27 novel NA NA NA NA no_subtype FALSE canonical NA NA 1983 None 4 23 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.4734.3 chr7 + 2788 5 full-splice_match ZNF212 ENST00000335870.6 2810 5 2 20 no_subtype FALSE canonical NA NA 757 None 3 7 0 FALSE 0 0 NA C coding 495 1485 127 1611 PB.2432.1 chr3 - 5599 2 novel_not_in_catalog SEMA5B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 27 None 5 29 1 TRUE 0 0 NA A coding 112 336 2022 2357 PB.8819.1 chr16 + 2230 19 novel_not_in_catalog TCF25 novel NA NA NA NA no_subtype TRUE canonical NA NA 1933 None 3 6 0 TRUE 0 0 NA A coding 676 2028 62 2089 PB.6651.1 chr11 - 3850 2 antisense novelGene_RBM7_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1347 None 2 36 0 FALSE 0 0 NA A coding 123 369 130 498 PB.5309.1 chr9 - 1798 1 full-splice_match RBPJP6 ENST00000411556.2 1431 1 -189 -178 no_subtype FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA A coding 169 507 887 1393 PB.7959.189 chr14 - 1512 8 fusion IGHV1-3,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 90 None 4 9 4 TRUE 0 0 NA B coding 196 588 790 1377 PB.4282.1 chr7 + 2775 5 full-splice_match FSCN1 ENST00000382361.7 2777 5 -6 8 no_subtype FALSE canonical NA NA 1399 None 33 15 0 FALSE 0 0 NA A coding 493 1479 121 1599 PB.9365.7 chr17 + 2870 7 genic_intron novelGene_705 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2631 None 4 26 6 FALSE 0 0 NA B non_coding NA NA NA NA PB.8353.1 chr16 - 3176 9 full-splice_match WDR24 ENST00000293883.8 3245 9 67 2 no_subtype FALSE canonical NA NA 1174 None 25 7 0 FALSE 0 0 NA C coding 790 2370 694 3063 PB.8353.2 chr16 - 1877 1 novel_in_catalog WDR24 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C coding 231 693 732 1424 PB.10906.1 chrX - 1388 3 full-splice_match CXorf21 ENST00000378962.3 1855 3 76 391 no_subtype FALSE canonical NA NA 131 None 7 1 0 FALSE 0 0 NA A coding 301 903 248 1150 PB.888.1 chr1 - 3207 5 full-splice_match ANGPTL1 ENST00000367629.1 2289 5 -20 -898 no_subtype FALSE canonical NA NA 302 None 2 15 0 FALSE 0 0 NA A coding 491 1473 329 1801 PB.3429.1 chr5 + 2891 1 novel_in_catalog AP3S1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5802.2 chr10 + 4615 8 full-splice_match REEP3 ENST00000373758.4 5205 8 40 550 no_subtype FALSE canonical NA NA 854 None 7 27 0 FALSE 0 0 NA A coding 255 765 144 908 PB.10806.2 chr22 - 2508 3 novel_not_in_catalog A4GALT novel NA NA NA NA no_subtype FALSE canonical NA NA 643 None 15 11 1 TRUE 0 0 NA A coding 353 1059 690 1748 PB.4405.1 chr7 - 1850 14 full-splice_match DDX56 ENST00000258772.9 2336 14 96 390 no_subtype TRUE canonical NA NA 71 None 26 2 0 FALSE 0 0 NA A coding 547 1641 12 1652 PB.5226.2 chr9 - 3169 1 genic_intron novelGene_125 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A coding 111 333 441 773 PB.5226.1 chr9 - 2968 20 full-splice_match TTC39B ENST00000512701.6 10483 20 205 7310 no_subtype FALSE canonical NA NA 72 None 4 13 0 FALSE 0 0 NA A coding 616 1848 31 1878 PB.11036.1 chrX - 2836 4 full-splice_match FTX ENST00000429124.5 2597 4 -11 -228 no_subtype FALSE canonical NA NA 185 None 3 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1319.1 chr2 + 1825 2 genic_intron novelGene_462 novel NA NA NA NA no_subtype FALSE canonical NA NA 1800 None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1890.1 chr2 + 5622 5 genic_intron novelGene_1403 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3883 None 2 59 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.8377.1 chr16 - 1505 8 full-splice_match NOXO1 ENST00000356120.8 1539 8 33 1 no_subtype FALSE canonical NA NA 321 None 3 6 0 FALSE 0 0 NA A coding 371 1113 256 1368 PB.4570.1 chr7 - 2766 19 full-splice_match PLOD3 ENST00000223127.7 2920 19 118 36 no_subtype FALSE canonical NA NA 390 None 45 3 0 FALSE 0 0 NA A coding 738 2214 282 2495 PB.2438.2 chr3 - 3879 14 novel_not_in_catalog CCDC14 novel NA NA NA NA no_subtype TRUE canonical NA NA 140 None 4 14 1 TRUE 0 0 NA A coding 905 2715 111 2825 PB.7233.1 chr12 + 2046 7 full-splice_match UNG ENST00000242576.6 2071 7 23 2 no_subtype FALSE canonical NA NA 884 None 2 7 0 FALSE 0 0 NA A coding 313 939 84 1022 PB.8120.1 chr15 + 1472 9 full-splice_match CCNB2 ENST00000288207.6 1556 9 82 2 no_subtype FALSE canonical NA NA 1195 None 9 1 0 FALSE 0 0 NA A coding 398 1194 110 1303 PB.3387.2 chr5 + 2780 33 novel_not_in_catalog CAST novel NA NA NA NA no_subtype TRUE canonical NA NA 2493 None 2 4 0 TRUE 0 0 NA B coding 769 2307 161 2467 PB.5129.6 chr8 - 6887 1 genic_intron novelGene_1152 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 32 0 FALSE 0 0 NA A coding 105 315 5098 5412 PB.5129.5 chr8 - 2914 10 novel_not_in_catalog TMEM71 novel NA NA NA NA no_subtype FALSE canonical NA NA 104 None 2 12 0 FALSE 0 0 NA B coding 198 594 1315 1908 PB.5129.2 chr8 - 1524 10 novel_not_in_catalog TMEM71 novel NA NA NA NA no_subtype FALSE canonical NA NA 122 None 11 7 0 FALSE 0 0 NA B coding 294 882 159 1040 PB.16.9 chr1 - 3081 14 novel_not_in_catalog NADK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 49 None 50 22 0 TRUE 0 0 NA B coding 440 1320 111 1430 PB.1474.11 chr2 - 1558 1 full-splice_match IGKJ2,IGKJ5 ENST00000390241.3 39 1 -366 -1153 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.16.5 chr1 - 2697 12 novel_not_in_catalog NADK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 127 None 2 24 1 TRUE 0 0 NA B coding 342 1026 189 1214 PB.9659.2 chr19 - 2928 3 novel_not_in_catalog SLC39A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 104 None 16 15 1 FALSE 0 0 NA B coding 105 315 202 516 PB.9659.3 chr19 - 2709 4 novel_not_in_catalog SLC39A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 75 None 4 17 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.9659.4 chr19 - 2742 4 novel_not_in_catalog SLC39A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 100 None 8 15 1 FALSE 0 0 NA B coding 100 300 198 497 PB.16.1 chr1 - 2290 14 novel_not_in_catalog NADK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 108 None 128 14 0 TRUE 0 0 NA B coding 440 1320 170 1489 PB.305.2 chr1 + 1825 2 full-splice_match PPCS ENST00000482168.1 688 2 -751 -386 no_subtype FALSE canonical NA NA 1025 None 2 6 0 FALSE 0 0 NA C coding 209 627 24 650 PB.7341.1 chr12 + 4334 7 antisense novelGene_RSRC2_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 3512 None 2 58 4 FALSE 0 0 NA A non_coding NA NA NA NA PB.5703.1 chr10 - 2936 1 genic_intron novelGene_186 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11011.1 chrX + 3194 2 antisense novelGene_OPHN1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 187 None 27 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1746.4 chr2 - 2924 5 novel_not_in_catalog ORMDL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 73 None 2 18 1 TRUE 0 0 NA C coding 153 459 1028 1486 PB.1648.1 chr2 - 3573 15 novel_not_in_catalog STAM2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 160 None 12 14 0 TRUE 0 0 NA C coding 525 1575 121 1695 PB.1560.1 chr2 + 3711 14 full-splice_match DDX18 ENST00000263239.6 3796 14 73 12 no_subtype FALSE canonical NA NA 1925 None 26 15 0 FALSE 0 0 NA A coding 670 2010 56 2065 PB.10049.1 chr19 + 1163 4 full-splice_match APOE ENST00000252486.8 1208 4 42 3 no_subtype FALSE canonical NA NA 305 None 83 0 0 FALSE 0 0 NA A coding 317 951 70 1020 PB.8842.5 chr17 + 3115 1 incomplete-splice_match PAFAH1B1 ENST00000397195.9 5497 11 2375 8 no_subtype FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7875.1 chr14 + 1954 8 novel_not_in_catalog CHGA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1444 None 86 4 0 FALSE 0 0 NA A coding 460 1380 146 1525 PB.1979.3 chr3 + 1498 1 genic_intron novelGene_38 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1979.2 chr3 + 6015 12 full-splice_match EDEM1 ENST00000256497.8 6146 12 133 -2 no_subtype FALSE canonical NA NA 1884 None 2 28 0 FALSE 0 0 NA C coding 657 1971 1 1971 PB.8842.1 chr17 + 1901 11 full-splice_match PAFAH1B1 ENST00000397195.9 5497 11 -73 3669 no_subtype FALSE canonical NA NA 1683 None 58 3 0 FALSE 0 0 NA C coding 410 1230 525 1754 PB.1979.4 chr3 + 2355 1 genic EDEM1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 15 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8842.3 chr17 + 2618 10 novel_in_catalog PAFAH1B1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1547 None 2 8 0 FALSE 0 0 NA C coding 394 1182 546 1727 PB.8842.2 chr17 + 1604 12 novel_not_in_catalog PAFAH1B1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1430 None 2 3 1 TRUE 0 0 NA C coding 410 1230 272 1501 PB.10676.1 chr22 - 3783 14 full-splice_match HPS4 ENST00000336873.9 3786 14 -26 29 no_subtype FALSE canonical NA NA 57 None 6 15 1 FALSE 0 0 NA C coding 708 2124 536 2659 PB.10676.2 chr22 - 3824 14 full-splice_match HPS4 ENST00000398145.6 4497 14 39 634 no_subtype FALSE canonical NA NA 100 None 27 9 0 FALSE 0 0 NA C coding 708 2124 579 2702 PB.4092.1 chr6 + 5740 1 antisense novelGene_FYN_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 32 0 FALSE 0 0 NA B coding 123 369 4000 4368 PB.1447.1 chr2 + 676 3 full-splice_match VAMP8 ENST00000263864.9 774 3 97 1 no_subtype FALSE canonical NA NA 221 None 3 6 0 FALSE 0 0 NA A coding 100 300 60 359 PB.5533.1 chr9 - 2614 2 full-splice_match NAIF1 ENST00000373078.4 3399 2 1 784 no_subtype FALSE canonical NA NA 730 None 4 7 0 FALSE 0 0 NA A coding 327 981 220 1200 PB.1871.4 chr2 + 2781 13 novel_in_catalog ANKZF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2457 None 2 5 0 FALSE 0 0 NA B coding 726 2178 401 2578 PB.7821.4 chr14 - 6023 22 novel_not_in_catalog NEK9 novel NA NA NA NA no_subtype FALSE canonical NA NA 359 None 5 12 0 TRUE 0 0 NA B coding 479 1437 2146 3582 PB.876.7 chr1 + 1470 1 genic_intron novelGene_1332 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.876.6 chr1 + 1475 1 genic_intron novelGene_1331 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7793.1 chr14 + 2615 4 novel_in_catalog SIPA1L1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 171 None 2 7 0 FALSE 0 0 NA B coding 501 1503 474 1976 PB.7793.2 chr14 + 5952 23 novel_not_in_catalog SIPA1L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 5637 None 2 4 0 TRUE 0 0 NA B coding 1783 5349 430 5778 PB.2182.2 chr3 + 3967 7 novel_not_in_catalog WDR6 novel NA NA NA NA no_subtype FALSE canonical NA NA 3559 None 19 1 0 TRUE 0 0 NA C coding 1121 3363 47 3409 PB.2182.3 chr3 + 4062 7 novel_not_in_catalog WDR6 novel NA NA NA NA no_subtype FALSE canonical NA NA 2944 None 3 4 1 FALSE 0 0 NA C coding 1122 3366 40 3405 PB.2182.1 chr3 + 4026 6 full-splice_match WDR6 ENST00000608424.5 4070 6 33 11 no_subtype FALSE canonical NA NA 2908 None 30 2 0 FALSE 0 0 NA C coding 1121 3363 7 3369 PB.1080.1 chr1 + 1480 3 full-splice_match SRP9 ENST00000304786.11 1480 3 -3 3 no_subtype FALSE canonical NA NA 256 None 81 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2182.4 chr3 + 4034 7 novel_not_in_catalog WDR6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2914 None 2 5 2 TRUE 0 0 NA C coding 950 2850 11 2860 PB.7152.1 chr12 - 1466 1 genic_intron novelGene_843 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6183.1 chr11 - 3724 1 genic_intron novelGene_55 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.236.1 chr1 - 971 6 full-splice_match TMEM54 ENST00000373463.7 999 6 22 6 no_subtype FALSE canonical NA NA 114 None 2 5 0 FALSE 0 0 NA A coding 222 666 99 764 PB.3358.1 chr5 - 2716 1 incomplete-splice_match TMEM167A ENST00000502346.1 4630 4 1910 5 no_subtype FALSE canonical NA NA NA None 34 15 0 FALSE 0 0 NA A coding 116 348 1005 1352 PB.8578.3 chr16 + 3827 30 full-splice_match ITGAX ENST00000268296.8 4703 30 54 822 no_subtype FALSE canonical NA NA 3454 None 2 3 0 FALSE 0 0 NA C coding 1163 3489 68 3556 PB.211.7 chr1 - 2913 7 novel_in_catalog LAPTM5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 116 None 4 6 0 FALSE 0 0 NA C coding 191 573 982 1554 PB.10420.2 chr20 + 1653 9 incomplete-splice_match MMP9 ENST00000372330.3 2336 13 681 2 internal_fragment FALSE canonical NA NA 1343 None 7 2 0 FALSE 0 0 NA C coding 370 1110 350 1459 PB.10420.1 chr20 + 2333 13 full-splice_match MMP9 ENST00000372330.3 2336 13 0 3 no_subtype FALSE canonical NA NA 2024 None 53 1 0 FALSE 0 0 NA C coding 707 2121 20 2140 PB.9419.1 chr17 - 1469 5 full-splice_match CBX8 ENST00000269385.8 3791 5 71 2251 no_subtype FALSE canonical NA NA 116 None 4 3 0 FALSE 0 0 NA A coding 389 1167 48 1214 PB.4536.1 chr7 + 3664 5 full-splice_match ZSCAN25 ENST00000334715.7 4079 5 408 7 no_subtype FALSE canonical NA NA 454 None 3 14 0 FALSE 0 0 NA A coding 380 1140 142 1281 PB.211.4 chr1 - 1426 1 incomplete-splice_match LAPTM5 ENST00000294507.3 2223 8 796 2 no_subtype FALSE canonical NA NA NA None 8 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6235.1 chr11 - 1482 10 full-splice_match TSG101 ENST00000251968.3 1824 10 337 5 no_subtype FALSE canonical NA NA 121 None 54 2 0 FALSE 0 0 NA A coding 390 1170 80 1249 PB.2348.3 chr3 + 3317 9 novel_not_in_catalog NXPE3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1901 None 2 9 0 FALSE 0 0 NA B coding 559 1677 773 2449 PB.1229.1 chr2 + 1866 7 full-splice_match MAPRE3 ENST00000233121.6 1892 7 25 1 no_subtype FALSE canonical NA NA 950 None 3 1 0 FALSE 0 0 NA C coding 281 843 174 1016 PB.9131.4 chr17 - 2624 2 novel_not_in_catalog GHDC novel NA NA NA NA no_subtype FALSE canonical NA NA 1538 None 2 16 1 TRUE 0 0 NA B coding 138 414 839 1252 PB.1229.3 chr2 + 3130 6 novel_in_catalog MAPRE3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2224 None 4 3 0 FALSE 0 0 NA C coding 156 468 1823 2290 PB.1229.2 chr2 + 3768 5 novel_in_catalog MAPRE3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2853 None 3 8 0 FALSE 0 0 NA C coding 156 468 2452 2919 PB.1229.4 chr2 + 2945 17 novel_not_in_catalog TMEM214 novel NA NA NA NA no_subtype TRUE canonical NA NA 1960 None 29 9 1 FALSE 0 0 NA A coding 455 1365 14 1378 PB.1229.7 chr2 + 1599 9 novel_not_in_catalog KHK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1564 None 3 6 1 TRUE 0 0 NA B coding 298 894 517 1410 PB.1229.6 chr2 + 3894 8 full-splice_match EMILIN1 ENST00000380320.8 3943 8 34 15 no_subtype FALSE canonical NA NA 3178 None 3 3 0 FALSE 0 0 NA A coding 1016 3048 466 3513 PB.1229.9 chr2 + 3132 5 novel_not_in_catalog KHK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2895 None 2 15 0 TRUE 0 0 NA B coding 150 450 2529 2978 PB.1229.8 chr2 + 3167 6 novel_not_in_catalog KHK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3132 None 4 16 1 TRUE 0 0 NA B coding 150 450 2529 2978 PB.7062.4 chr12 + 2636 15 full-splice_match OS9 ENST00000389146.10 2091 15 -15 -530 no_subtype FALSE canonical NA NA 1865 None 4 4 0 FALSE 0 0 NA C coding 652 1956 33 1988 PB.7062.5 chr12 + 2511 14 full-splice_match OS9 ENST00000257966.12 2505 14 -7 1 no_subtype FALSE canonical NA NA 1740 None 29 3 0 FALSE 0 0 NA C coding 613 1839 25 1863 PB.7062.3 chr12 + 2685 15 novel_in_catalog OS9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1916 None 231 2 0 FALSE 0 0 NA C coding 668 2004 36 2039 PB.2465.1 chr3 + 1597 7 novel_not_in_catalog HMCES novel NA NA NA NA no_subtype FALSE canonical NA NA 904 None 5 7 1 FALSE 0 0 NA C coding 354 1062 77 1138 PB.10400.1 chr20 - 1539 12 novel_not_in_catalog ADA novel NA NA NA NA no_subtype TRUE canonical NA NA 174 None 56 3 0 TRUE 0 0 NA B coding 466 1398 142 1539 PB.9290.4 chr17 + 3183 1 novel_in_catalog MAP3K3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 7 20 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10400.2 chr20 - 1490 10 novel_in_catalog ADA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 113 None 2 1 0 FALSE 0 0 NA B coding 274 822 81 902 PB.9562.1 chr18 - 1563 11 novel_not_in_catalog DYM novel NA NA NA NA no_subtype FALSE canonical NA NA 66 None 2 0 0 TRUE 0 0 NA A coding 361 1083 228 1310 PB.1674.1 chr2 + 1715 1 genic_intron novelGene_1296 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9562.3 chr18 - 3544 2 genic_intron novelGene_487 novel NA NA NA NA no_subtype FALSE canonical NA NA 3200 None 2 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9290.2 chr17 + 3116 15 incomplete-splice_match MAP3K3 ENST00000361733.7 3529 16 392 21 internal_fragment TRUE canonical NA NA 1580 None 2 4 0 FALSE 0 0 NA B coding 602 1806 1 1806 PB.5320.2 chr9 - 5962 24 full-splice_match TMEM2 ENST00000377044.8 6523 24 377 184 no_subtype FALSE canonical NA NA 151 None 2 11 0 FALSE 0 0 NA C coding 1383 4149 164 4312 PB.747.1 chr1 - 7129 1 full-splice_match Y_RNA ENST00000383924.1 113 1 -1468 -5548 no_subtype FALSE canonical NA NA NA None 3 33 0 FALSE 0 0 NA C coding 148 444 5910 6353 PB.7123.2 chr12 + 2511 1 novel_in_catalog TBC1D15 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 12 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3756.1 chr6 - 2538 3 novel_not_in_catalog SNORA20 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2386 None 3 21 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.3756.2 chr6 - 1431 1 novel_in_catalog SNORA20 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7123.1 chr12 + 2186 17 full-splice_match TBC1D15 ENST00000485960.6 2489 17 16 287 no_subtype FALSE canonical NA NA 1810 None 9 1 0 FALSE 0 0 NA C coding 674 2022 8 2029 PB.1235.2 chr2 - 3949 20 novel_in_catalog GTF3C2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 52 None 2 2 0 FALSE 0 0 NA C coding 950 2850 279 3128 PB.5523.1 chr9 + 3769 19 full-splice_match STXBP1 ENST00000373299.4 3765 19 -19 15 no_subtype FALSE canonical NA NA 1842 None 7 10 0 FALSE 0 0 NA A coding 594 1782 141 1922 PB.1235.1 chr2 - 3839 19 full-splice_match GTF3C2 ENST00000264720.7 3882 19 33 10 no_subtype FALSE canonical NA NA 263 None 69 4 0 FALSE 0 0 NA C coding 911 2733 288 3020 PB.6915.4 chr12 + 6570 1 genic_intron novelGene_448 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 39 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8838.1 chr17 - 2656 15 full-splice_match TSR1 ENST00000301364.9 5188 15 1055 1477 no_subtype FALSE canonical NA NA 122 None 13 6 0 FALSE 0 0 NA A coding 804 2412 26 2437 PB.6599.2 chr11 - 2088 1 novel_in_catalog FAM76B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6599.1 chr11 - 3639 10 full-splice_match FAM76B ENST00000358780.9 3952 10 288 25 no_subtype FALSE canonical NA NA 112 None 4 22 0 FALSE 0 0 NA C coding 339 1017 26 1042 PB.10640.3 chr22 - 3082 11 novel_in_catalog TRMT2A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 342 None 6 16 0 FALSE 0 0 NA C coding 299 897 1521 2417 PB.10316.2 chr20 + 3639 18 novel_not_in_catalog TM9SF4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1681 None 2 9 0 TRUE 0 0 NA B coding 600 1800 29 1828 PB.10640.1 chr22 - 2880 12 full-splice_match TRMT2A ENST00000252136.11 2964 12 71 13 no_subtype TRUE canonical NA NA 342 None 43 12 0 FALSE 0 0 NA C coding 625 1875 319 2193 PB.9280.1 chr17 - 3249 2 antisense novelGene_BCAS3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2500 None 2 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5216.2 chr9 - 2912 1 full-splice_match RANBP6 ENST00000259569.5 4576 1 3 1661 no_subtype FALSE canonical NA NA NA None 7 55 0 FALSE 0 0 NA C coding 968 2904 9 2912 PB.5216.1 chr9 - 3457 2 full-splice_match RANBP6 ENST00000485372.1 1000 2 -3 -2454 no_subtype FALSE canonical NA NA 144 None 2 3 0 FALSE 0 0 NA C coding 693 2079 130 2208 PB.1004.3 chr1 + 3455 1 genic_intron novelGene_1386 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 28 0 FALSE 0 0 NA A coding 113 339 1738 2076 PB.8636.1 chr16 - 1365 1 antisense novelGene_CCL22_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7239.2 chr12 - 1511 7 novel_not_in_catalog GLTP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 162 None 43 4 0 TRUE 0 0 NA A coding 209 627 60 686 PB.5500.1 chr9 - 3240 1 genic RP11-164H5.1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 40 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8118.4 chr15 - 1596 11 novel_in_catalog SLTM novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 276 None 3 0 0 FALSE 0 0 NA B coding 494 1482 115 1596 PB.4148.5 chr6 - 3408 14 novel_not_in_catalog BCLAF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 69 None 4 9 2 TRUE 0 0 NA C coding 913 2739 184 2922 PB.8118.1 chr15 - 2767 1 novel_in_catalog SLTM novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 26 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8118.3 chr15 - 3633 21 novel_in_catalog SLTM novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 177 None 3 3 0 FALSE 0 0 NA B coding 1016 3048 16 3063 PB.10408.1 chr20 + 1583 5 novel_not_in_catalog SYS1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1009 None 43 1 1 TRUE 0 0 NA B coding 156 468 135 602 PB.2254.1 chr3 - 3269 13 full-splice_match ACTR8 ENST00000335754.7 3629 13 23 337 no_subtype FALSE canonical NA NA 201 None 12 7 0 FALSE 0 0 NA A coding 624 1872 79 1950 PB.10408.2 chr20 + 2648 6 novel_not_in_catalog SYS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1943 None 10 6 2 TRUE 0 0 NA B coding 156 468 135 602 PB.6012.1 chr10 - 3358 1 antisense novelGene_SLK_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 33 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.854.1 chr1 - 3204 16 novel_in_catalog SELP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 92 None 8 1 0 FALSE 0 0 NA A coding 665 1995 494 2488 PB.4249.3 chr6 - 3502 2 genic_intron novelGene_1289 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1684 None 2 37 1 FALSE 0 0 NA A coding 103 309 1806 2114 PB.9947.1 chr19 - 574 6 novel_not_in_catalog TYROBP novel NA NA NA NA no_subtype FALSE canonical NA NA 135 None 4 0 0 TRUE 0 0 NA A coding 113 339 75 413 PB.1583.2 chr2 - 3450 3 genic_intron novelGene_1099 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2264 None 2 25 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.8267.2 chr15 - 1325 6 full-splice_match SEC11A ENST00000268220.11 1656 6 325 6 no_subtype FALSE canonical NA NA 367 None 7 3 0 FALSE 0 0 NA A coding 179 537 317 853 PB.1583.1 chr2 - 3898 9 novel_not_in_catalog AMMECR1L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 220 None 5 17 0 FALSE 0 0 NA A coding 310 930 684 1613 PB.7345.2 chr12 + 950 9 novel_not_in_catalog DENR novel NA NA NA NA no_subtype TRUE canonical NA NA 784 None 2 1 0 TRUE 0 0 NA B coding 198 594 105 698 PB.8604.1 chr16 + 3467 18 full-splice_match CYLD ENST00000569418.5 3513 18 44 2 no_subtype FALSE canonical NA NA 2911 None 2 3 0 FALSE 0 0 NA C coding 953 2859 235 3093 PB.11209.1 chrX + 2006 10 full-splice_match ATP6AP1 ENST00000369762.6 2099 10 80 13 no_subtype FALSE canonical NA NA 1184 None 111 8 0 FALSE 0 0 NA A coding 448 1344 48 1391 PB.8604.3 chr16 + 2123 11 incomplete-splice_match CYLD ENST00000398568.6 3536 18 38 1375 3prime_fragment FALSE canonical NA NA 2079 None 2 2 0 FALSE 0 0 NA C coding 620 1860 263 2122 PB.1305.1 chr2 + 1385 13 full-splice_match DYNC2LI1 ENST00000260605.12 1399 13 10 4 no_subtype FALSE canonical NA NA 1083 None 4 2 0 FALSE 0 0 NA A coding 351 1053 91 1143 PB.8604.4 chr16 + 3442 17 novel_in_catalog CYLD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2882 None 4 1 0 FALSE 0 0 NA C coding 953 2859 206 3064 PB.385.2 chr1 - 6257 3 novel_not_in_catalog SSBP3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 205 None 2 49 0 TRUE 0 0 NA A coding 114 342 3593 3934 PB.3860.1 chr6 - 1902 6 full-splice_match SPDEF ENST00000374037.7 1895 6 -15 8 no_subtype FALSE canonical NA NA 401 None 9 6 0 FALSE 0 0 NA A coding 335 1005 431 1435 PB.1120.1 chr1 - 2797 2 genic_intron novelGene_1412 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2538 None 8 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11210.2 chrX + 2231 11 full-splice_match GDI1 ENST00000447750.6 2474 11 240 3 no_subtype FALSE canonical NA NA 1286 None 9 6 0 FALSE 0 0 NA C coding 447 1341 96 1436 PB.6412.8 chr11 - 3062 14 full-splice_match SF1 ENST00000334944.9 3094 14 25 7 no_subtype FALSE canonical NA NA 400 None 2 7 0 FALSE 0 0 NA C coding 612 1836 448 2283 PB.6412.9 chr11 - 2565 12 novel_not_in_catalog SF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 186 None 2 7 1 FALSE 0 0 NA C coding 433 1299 425 1723 PB.6412.4 chr11 - 2072 13 full-splice_match SF1 ENST00000377390.7 3470 13 222 1176 no_subtype FALSE canonical NA NA 147 None 81 1 0 FALSE 0 0 NA C coding 639 1917 117 2033 PB.2452.1 chr3 - 3997 2 novel_in_catalog MGLL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 139 None 3 16 0 FALSE 0 0 NA C coding 100 300 2084 2383 PB.6412.6 chr11 - 2784 12 novel_not_in_catalog SF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 400 None 6 7 1 TRUE 0 0 NA C coding 433 1299 641 1939 PB.6412.1 chr11 - 2576 13 full-splice_match SF1 ENST00000227503.13 2850 13 263 11 no_subtype FALSE canonical NA NA 123 None 145 10 0 FALSE 0 0 NA C coding 548 1644 93 1736 PB.4049.1 chr6 - 2748 15 full-splice_match PREP ENST00000369110.7 2905 15 -6 163 no_subtype FALSE canonical NA NA 244 None 44 10 0 FALSE 0 0 NA A coding 710 2130 200 2329 PB.2043.6 chr3 - 6466 4 novel_not_in_catalog SATB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1790 None 2 41 2 TRUE 0 0 NA C coding 280 840 1341 2180 PB.5228.1 chr9 + 3028 1 antisense novelGene_PSIP1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2043.4 chr3 - 2901 11 full-splice_match SATB1 ENST00000454909.6 3755 11 39 815 no_subtype FALSE canonical NA NA 170 None 2 9 1 FALSE 0 0 NA C coding 763 2289 195 2483 PB.2043.5 chr3 - 3725 2 genic_intron novelGene_173 novel NA NA NA NA no_subtype FALSE canonical NA NA 1936 None 3 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2043.2 chr3 - 2867 11 full-splice_match SATB1 ENST00000338745.10 7810 11 1575 3368 no_subtype FALSE canonical NA NA 136 None 89 2 0 FALSE 0 0 NA C coding 763 2289 161 2449 PB.2043.3 chr3 - 3158 12 novel_not_in_catalog SATB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 75 None 2 2 1 FALSE 0 0 NA C coding 763 2289 245 2533 PB.9439.2 chr17 - 2526 11 full-splice_match P4HB ENST00000331483.8 2603 11 68 9 no_subtype FALSE canonical NA NA 300 None 97 7 0 FALSE 0 0 NA C coding 508 1524 156 1679 PB.8571.1 chr16 - 2481 12 novel_in_catalog RP11-196G11.1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 412 None 2 3 0 FALSE 0 0 NA A coding 628 1884 240 2123 PB.2252.1 chr3 - 2047 14 full-splice_match TKT ENST00000462138.5 3010 14 9 954 no_subtype FALSE canonical NA NA 187 None 188 0 0 FALSE 0 0 NA A coding 623 1869 81 1949 PB.10893.4 chrX - 2858 2 genic_intron novelGene_195 novel NA NA NA NA no_subtype TRUE canonical NA NA 2286 None 2 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3774.4 chr6 - 2906 14 novel_not_in_catalog MBOAT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 276 None 2 16 1 TRUE 0 0 NA B coding 495 1485 178 1662 PB.7156.1 chr12 - 3205 22 incomplete-splice_match EEA1 ENST00000322349.12 9875 29 81 6589 internal_fragment FALSE canonical NA NA 208 None 2 0 0 FALSE 0 0 NA B coding 1007 3021 185 3205 PB.11151.1 chrX - 4202 9 full-splice_match ELF4 ENST00000308167.9 4165 9 -45 8 no_subtype FALSE canonical NA NA 216 None 7 10 0 FALSE 0 0 NA C coding 663 1989 426 2414 PB.1812.2 chr2 + 3021 5 novel_not_in_catalog ICOS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2687 None 2 14 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.3774.2 chr6 - 2956 15 novel_not_in_catalog MBOAT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 42 None 37 10 2 TRUE 0 0 NA B coding 495 1485 220 1704 PB.3774.3 chr6 - 2822 16 novel_not_in_catalog MBOAT1 novel NA NA NA NA no_subtype TRUE canonical NA NA 37 None 21 9 3 TRUE 0 0 NA B coding 495 1485 215 1699 PB.955.1 chr1 + 2809 1 genic_intron novelGene_1377 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9442.1 chr17 - 1737 11 novel_not_in_catalog SIRT7 novel NA NA NA NA no_subtype TRUE canonical NA NA 152 None 24 4 0 TRUE 0 0 NA A coding 400 1200 60 1259 PB.5074.3 chr8 - 2694 7 novel_not_in_catalog EIF3H novel NA NA NA NA no_subtype FALSE canonical NA NA 99 None 2 12 0 FALSE 0 0 NA C coding 179 537 1985 2521 PB.7939.2 chr14 + 1485 1 incomplete-splice_match TNFAIP2 ENST00000333007.5 4175 11 2689 2 no_subtype FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.11171.3 chrX + 4107 4 novel_in_catalog FHL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1215 None 2 19 0 FALSE 0 0 NA C coding 154 462 66 527 PB.8924.1 chr17 - 3169 21 novel_not_in_catalog PIK3R6 novel NA NA NA NA no_subtype TRUE canonical NA NA 144 None 6 3 0 FALSE 0 0 NA A coding 754 2262 358 2619 PB.6464.1 chr11 - 1170 3 full-splice_match ZDHHC24 ENST00000310442.4 4721 3 199 3352 no_subtype FALSE canonical NA NA 317 None 2 5 0 FALSE 0 0 NA A coding 284 852 37 888 PB.5074.2 chr8 - 1233 8 full-splice_match EIF3H ENST00000521861.5 3959 8 4 2722 no_subtype FALSE canonical NA NA 152 None 43 0 0 FALSE 0 0 NA C coding 352 1056 21 1076 PB.10046.1 chr19 + 1526 12 novel_not_in_catalog CBLC novel NA NA NA NA no_subtype FALSE canonical NA NA 1445 None 20 1 0 TRUE 0 0 NA B coding 474 1422 14 1435 PB.9224.1 chr17 + 1812 2 antisense novelGene_FAM117A_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1737 None 2 1 0 FALSE 0 0 NA A coding 116 348 1096 1443 PB.8172.1 chr15 + 1638 1 genic_intron novelGene_627 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 11 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8243.1 chr15 - 2799 1 novel_in_catalog CTSH novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 18 0 FALSE 0 0 NA C coding 100 300 1025 1324 PB.5455.1 chr9 - 3060 13 novel_not_in_catalog ALAD novel NA NA NA NA no_subtype TRUE canonical NA NA 63 None 2 15 2 TRUE 0 0 NA A coding 339 1017 112 1128 PB.5944.1 chr10 - 1785 3 genic_intron novelGene_884 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 631 None 2 11 1 FALSE 0 0 NA A coding 109 327 422 748 PB.781.1 chr1 - 2784 1 full-splice_match RP11-226L15.5 ENST00000562313.1 1842 1 -951 9 no_subtype FALSE canonical NA NA NA None 5 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1174.1 chr2 - 1091 4 full-splice_match ADI1 ENST00000327435.10 2391 4 205 1095 no_subtype FALSE canonical NA NA 164 None 4 4 0 FALSE 0 0 NA A coding 179 537 45 581 PB.4205.1 chr6 - 2065 5 full-splice_match FBXO5 ENST00000229758.7 2037 5 -21 -7 no_subtype FALSE canonical NA NA 183 None 2 9 0 FALSE 0 0 NA C coding 447 1341 81 1421 PB.9785.1 chr19 + 2795 4 full-splice_match ZNF627 ENST00000361113.9 2840 4 43 2 no_subtype FALSE canonical NA NA 356 None 3 6 0 FALSE 0 0 NA A coding 461 1383 166 1548 PB.2113.4 chr3 + 3590 16 novel_not_in_catalog CTNNB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2501 None 4 16 0 TRUE 0 0 NA C coding 763 2289 215 2503 PB.5137.15 chr8 - 3232 1 novel_in_catalog ST3GAL1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5137.13 chr8 - 1650 1 genic_intron novelGene_1154 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5137.12 chr8 - 5605 1 novel_in_catalog ST3GAL1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 31 0 FALSE 0 0 NA C coding 238 714 3513 4226 PB.9431.2 chr17 - 1846 5 full-splice_match ACTG1 ENST00000575842.5 2256 5 420 -10 no_subtype FALSE canonical NA NA 130 None 5 10 0 FALSE 0 0 NA C coding 375 1125 8 1132 PB.2220.1 chr3 + 2578 12 novel_not_in_catalog MAPKAPK3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1184 None 4 7 1 TRUE 0 0 NA B coding 382 1146 189 1334 PB.8903.1 chr17 + 1456 7 novel_not_in_catalog TNFSF13 novel NA NA NA NA no_subtype FALSE canonical NA NA 856 None 6 2 0 FALSE 0 0 NA C coding 233 699 116 814 PB.7399.2 chr13 + 2648 16 novel_not_in_catalog NUP58 novel NA NA NA NA no_subtype FALSE canonical NA NA 2487 None 2 4 0 TRUE 0 0 NA C coding 587 1761 150 1910 PB.7399.1 chr13 + 2684 17 novel_not_in_catalog NUP58 novel NA NA NA NA no_subtype TRUE canonical NA NA 2523 None 2 6 0 TRUE 0 0 NA C coding 599 1797 150 1946 PB.8903.2 chr17 + 1473 6 full-splice_match TNFSF13 ENST00000338784.8 1971 6 487 11 no_subtype FALSE canonical NA NA 599 None 34 1 0 FALSE 0 0 NA C coding 233 699 8 706 PB.10033.1 chr19 + 1600 9 full-splice_match CD177 ENST00000618265.4 2222 9 27 595 no_subtype FALSE canonical NA NA 1110 None 117 4 0 FALSE 0 0 NA A coding 437 1311 30 1340 PB.7139.1 chr12 + 3117 5 novel_in_catalog METTL25 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1157 None 5 9 0 FALSE 0 0 NA A coding 466 1398 27 1424 PB.7399.4 chr13 + 4214 16 full-splice_match NUP58 ENST00000381736.7 4332 16 104 14 no_subtype FALSE canonical NA NA 1776 None 4 21 0 FALSE 0 0 NA C coding 599 1797 147 1943 PB.3994.2 chr6 - 3781 18 incomplete-splice_match COL12A1 ENST00000345356.10 5886 51 4245 -2140 5prime_fragment FALSE canonical NA NA 70 None 2 7 0 FALSE 0 0 NA A coding 254 762 801 1562 PB.1426.1 chr2 + 2128 9 novel_not_in_catalog MTHFD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 913 None 17 10 0 TRUE 0 0 NA B coding 350 1050 25 1074 PB.807.1 chr1 + 2646 10 full-splice_match TOMM40L ENST00000367988.7 2708 10 57 5 no_subtype FALSE canonical NA NA 999 None 4 4 0 FALSE 0 0 NA A coding 299 897 240 1136 PB.9305.18 chr17 - 3256 14 novel_not_in_catalog DDX5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 214 None 2 16 1 TRUE 0 0 NA C coding 406 1218 171 1388 PB.10678.3 chr22 - 1865 7 full-splice_match TPST2 ENST00000338754.8 5697 7 39 3793 no_subtype FALSE canonical NA NA 72 None 10 3 0 FALSE 0 0 NA A coding 377 1131 233 1363 PB.6522.1 chr11 - 1589 8 full-splice_match UCP2 ENST00000310473.7 2113 8 516 8 no_subtype FALSE canonical NA NA 71 None 384 3 0 FALSE 0 0 NA C coding 309 927 328 1254 PB.9305.15 chr17 - 4079 9 novel_in_catalog DDX5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 214 None 2 16 0 FALSE 0 0 NA C coding 367 1101 171 1271 PB.3635.2 chr5 - 1832 7 full-splice_match PANK3 ENST00000239231.6 10506 7 210 8464 no_subtype FALSE canonical NA NA 135 None 2 3 0 FALSE 0 0 NA C coding 370 1110 108 1217 PB.9932.1 chr19 + 1606 6 novel_not_in_catalog FXYD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 202 None 2 9 0 FALSE 0 0 NA A coding 151 453 471 923 PB.9799.1 chr19 + 2001 11 novel_not_in_catalog BEST2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1199 None 2 1 0 TRUE 0 0 NA A coding 509 1527 97 1623 PB.6522.2 chr11 - 2049 8 novel_not_in_catalog UCP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 6 7 0 FALSE 0 0 NA C coding 309 927 792 1718 PB.9305.12 chr17 - 3772 11 novel_in_catalog DDX5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 214 None 10 6 0 FALSE 0 0 NA C coding 406 1218 171 1388 PB.9305.13 chr17 - 3626 13 novel_in_catalog DDX5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 108 None 6 6 0 FALSE 0 0 NA C coding 406 1218 252 1469 PB.9425.2 chr17 + 6613 41 novel_not_in_catalog RNF213 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5605 None 6 15 3 TRUE 0 0 NA B coding 1749 5247 510 5756 PB.9425.1 chr17 + 7750 42 novel_not_in_catalog RNF213 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 6742 None 4 16 4 TRUE 0 0 NA B coding 1597 4791 184 4974 PB.10209.1 chr19 - 2094 3 full-splice_match ZBTB45 ENST00000594051.5 2541 3 436 11 no_subtype FALSE canonical NA NA 45 None 4 8 0 FALSE 0 0 NA A coding 511 1533 46 1578 PB.4578.1 chr7 - 2968 6 novel_not_in_catalog NAPEPLD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 390 None 7 21 1 TRUE 0 0 NA A coding 393 1179 407 1585 PB.1490.1 chr2 - 2387 8 full-splice_match LMAN2L ENST00000264963.8 2397 8 2 8 no_subtype FALSE canonical NA NA 208 None 6 19 0 FALSE 0 0 NA A coding 348 1044 22 1065 PB.9578.1 chr18 - 3233 1 novel_in_catalog ATP8B1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 25 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9425.9 chr17 + 5402 32 novel_not_in_catalog RNF213 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4394 None 4 12 3 TRUE 0 0 NA B coding 1510 4530 16 4545 PB.5998.1 chr10 + 2752 14 novel_not_in_catalog SFXN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1185 None 5 11 0 TRUE 0 0 NA A coding 322 966 317 1282 PB.3785.36 chr6 - 2663 2 genic_intron novelGene_237 novel NA NA NA NA no_subtype FALSE canonical NA NA 1619 None 2 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1657.4 chr2 + 1579 2 novel_not_in_catalog MARCH7 novel NA NA NA NA no_subtype FALSE canonical NA NA 132 None 2 12 0 FALSE 0 0 NA B coding 67 201 147 347 PB.5729.5 chr10 + 3310 8 full-splice_match ZEB1 ENST00000542815.7 3217 8 -2 -91 no_subtype FALSE canonical NA NA 2596 None 2 5 0 FALSE 0 0 NA C coding 1057 3171 16 3186 PB.348.3 chr1 - 2743 14 novel_not_in_catalog MKNK1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 65 None 5 15 0 FALSE 0 0 NA C coding 412 1236 352 1587 PB.2363.1 chr3 + 1673 6 full-splice_match TRAT1 ENST00000295756.10 1919 6 110 136 no_subtype FALSE canonical NA NA 423 None 15 9 1 FALSE 0 0 NA C coding 186 558 121 678 PB.3557.3 chr5 + 2624 1 genic_intron novelGene_1201 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3785.2 chr6 - 1739 1 incomplete-splice_match FAM65B ENST00000538035.5 5389 22 3640 11 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1955.2 chr2 + 2788 13 novel_not_in_catalog CAPN10 novel NA NA NA NA no_subtype FALSE canonical NA NA 2344 None 2 19 1 FALSE 0 0 NA C coding 280 840 170 1009 PB.2045.1 chr3 + 2224 6 full-splice_match RAB5A ENST00000273047.8 2536 6 303 9 no_subtype FALSE canonical NA NA 765 None 10 21 1 FALSE 0 0 NA C coding 215 645 234 878 PB.9287.1 chr17 + 1405 1 novel_in_catalog DCAF7 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5580.3 chr9 + 5332 16 novel_in_catalog PRRC2B novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 2922 None 2 10 0 FALSE 0 0 NA B coding 642 1926 1037 2962 PB.5580.2 chr9 + 5371 17 novel_in_catalog PRRC2B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2845 None 7 11 1 FALSE 0 0 NA B coding 700 2100 878 2977 PB.6257.1 chr11 + 1689 9 full-splice_match DEPDC7 ENST00000241051.7 1755 9 61 5 no_subtype TRUE canonical NA NA 1373 None 4 0 0 FALSE 0 0 NA A coding 511 1533 32 1564 PB.6346.9 chr11 + 3434 1 novel_in_catalog STX3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 28 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.986.1 chr1 + 2537 12 novel_not_in_catalog LAX1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2330 None 2 7 5 TRUE 0 0 NA B coding 398 1194 384 1577 PB.6770.1 chr12 - 3692 2 antisense novelGene_CCND2_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 45 None 11 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7560.5 chr13 - 6546 3 genic_intron novelGene_918 novel NA NA NA NA no_subtype TRUE canonical NA NA 5860 None 2 44 1 FALSE 0 0 NA A coding 112 336 828 1163 PB.1090.2 chr1 - 2885 1 incomplete-splice_match ITPKB ENST00000272117.7 5822 7 2934 4 no_subtype FALSE canonical NA NA NA None 6 17 0 FALSE 0 0 NA C coding 126 378 477 854 PB.11210.1 chrX + 2461 10 novel_in_catalog GDI1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1516 None 14 10 0 FALSE 0 0 NA C coding 196 588 91 678 PB.7349.3 chr12 + 1837 6 novel_in_catalog OGFOD2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 551 None 2 14 0 FALSE 0 0 NA C coding 266 798 21 818 PB.138.3 chr1 - 1458 11 novel_in_catalog GALE novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 67 None 3 0 0 FALSE 0 0 NA B coding 348 1044 73 1116 PB.138.1 chr1 - 1550 12 novel_not_in_catalog GALE novel NA NA NA NA no_subtype FALSE canonical NA NA 58 None 23 2 0 FALSE 0 0 NA B coding 348 1044 157 1200 PB.1955.1 chr2 + 2590 12 full-splice_match CAPN10 ENST00000391984.6 2644 12 37 17 no_subtype FALSE canonical NA NA 2148 None 12 3 0 FALSE 0 0 NA C coding 672 2016 160 2175 PB.2768.1 chr4 + 1533 2 antisense novelGene_CDC42P6_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 53 None 20 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11164.1 chrX + 1180 1 full-splice_match FAM127A ENST00000257013.8 1181 1 -11 12 no_subtype FALSE canonical NA NA NA None 4 2 0 FALSE 0 0 NA A coding 113 339 30 368 PB.8767.11 chr16 + 5682 12 novel_not_in_catalog PLCG2 novel NA NA NA NA no_subtype FALSE canonical NA NA 5178 None 2 26 2 TRUE 0 0 NA B coding 349 1047 198 1244 PB.1577.4 chr2 - 3441 14 novel_not_in_catalog IWS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 79 None 2 17 2 TRUE 0 0 NA C coding 496 1488 257 1744 PB.7385.1 chr13 - 1989 2 full-splice_match GJB2 ENST00000382848.4 2250 2 -72 333 no_subtype FALSE canonical NA NA 188 None 2 8 0 FALSE 0 0 NA A coding 226 678 211 888 PB.986.4 chr1 + 5488 18 novel_not_in_catalog ZC3H11A novel NA NA NA NA no_subtype FALSE canonical NA NA 3507 None 2 17 1 TRUE 0 0 NA C coding 648 1944 1330 3273 PB.9690.1 chr19 + 3782 2 antisense novelGene_AC005523.2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 3479 None 4 17 1 FALSE 0 0 NA A coding 669 2007 111 2117 PB.2256.2 chr3 - 5730 24 full-splice_match FAM208A ENST00000493960.6 5600 24 -257 127 no_subtype FALSE canonical NA NA 599 None 4 6 0 FALSE 0 0 NA A coding 1512 4536 269 4804 PB.4418.7 chr7 + 5946 1 novel_in_catalog IKZF1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4657.1 chr7 + 2078 1 genic_intron novelGene_1121 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1090.5 chr1 - 5508 2 novel_not_in_catalog ITPKB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2222 None 2 39 1 TRUE 0 0 NA C coding 205 615 2603 3217 PB.7033.14 chr12 - 3738 29 full-splice_match SMARCC2 ENST00000347471.8 3839 29 81 20 no_subtype FALSE canonical NA NA 117 None 3 1 0 FALSE 0 0 NA C coding 1130 3390 7 3396 PB.7033.15 chr12 - 3667 29 novel_not_in_catalog SMARCC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 123 None 2 5 2 FALSE 0 0 NA C coding 1105 3315 13 3327 PB.8028.1 chr15 + 2289 8 full-splice_match SNAP23 ENST00000249647.7 2687 8 392 6 no_subtype FALSE canonical NA NA 646 None 9 6 0 FALSE 0 0 NA C coding 211 633 77 709 PB.1090.4 chr1 - 6264 9 novel_not_in_catalog ITPKB novel NA NA NA NA no_subtype FALSE canonical NA NA 239 None 2 29 0 TRUE 0 0 NA C coding 946 2838 445 3282 PB.679.1 chr1 + 3024 12 full-splice_match TUFT1 ENST00000368848.6 3033 12 0 9 no_subtype FALSE canonical NA NA 1093 None 19 8 0 FALSE 0 0 NA C coding 365 1095 60 1154 PB.7006.1 chr12 - 2750 1 full-splice_match CBX5 ENST00000577868.1 80 1 -2225 -445 no_subtype FALSE canonical NA NA NA None 7 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5831.1 chr10 - 1971 8 novel_not_in_catalog C10orf54 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 217 None 302 5 1 TRUE 0 0 NA C coding 311 933 136 1068 PB.7765.2 chr14 - 1538 5 full-splice_match MAX ENST00000358664.8 1546 5 -4 12 no_subtype FALSE canonical NA NA 171 None 23 8 1 FALSE 0 0 NA C coding 160 480 136 615 PB.6505.3 chr11 + 1401 6 full-splice_match IL18BP ENST00000393703.8 1788 6 388 -1 no_subtype FALSE canonical NA NA 656 None 7 8 0 FALSE 0 0 NA C coding 194 582 150 731 PB.7765.1 chr14 - 1531 4 full-splice_match MAX ENST00000358402.8 1973 4 11 431 no_subtype FALSE canonical NA NA 190 None 25 7 0 FALSE 0 0 NA C coding 151 453 155 607 PB.7765.6 chr14 - 3489 3 novel_not_in_catalog MAX novel NA NA NA NA no_subtype FALSE canonical NA NA 214 None 2 20 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.4418.2 chr7 + 3540 10 novel_not_in_catalog IKZF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 902 None 8 5 0 TRUE 0 0 NA B coding 519 1557 53 1609 PB.7765.4 chr14 - 2774 5 full-splice_match MAX ENST00000556979.5 615 5 0 -2159 no_subtype FALSE canonical NA NA 214 None 2 13 0 FALSE 0 0 NA C coding 103 309 179 487 PB.7765.5 chr14 - 1506 1 novel_in_catalog MAX novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4747.2 chr7 + 5982 1 novel_in_catalog GIMAP5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 37 0 FALSE 0 0 NA C coding 315 945 4524 5468 PB.753.2 chr1 - 1635 9 full-splice_match SH2D2A ENST00000368199.7 1658 9 12 11 no_subtype FALSE canonical NA NA 176 None 11 3 0 FALSE 0 0 NA C coding 389 1167 143 1309 PB.557.2 chr1 + 2479 1 genic CD53 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8451.1 chr16 + 2915 8 full-splice_match BFAR ENST00000261658.6 3039 8 110 14 no_subtype FALSE canonical NA NA 1327 None 4 9 0 FALSE 0 0 NA C coding 450 1350 168 1517 PB.9223.1 chr17 - 1206 9 full-splice_match SLC35B1 ENST00000240333.10 1850 9 248 396 no_subtype FALSE canonical NA NA 222 None 2 0 0 FALSE 0 0 NA A coding 359 1077 8 1084 PB.8232.1 chr15 + 3102 5 antisense novelGene_PEAK1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2956 None 2 18 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.3785.39 chr6 - 5747 1 genic_intron novelGene_241 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 33 0 FALSE 0 0 NA A coding 120 360 3805 4164 PB.2504.1 chr3 + 1810 7 full-splice_match ATP1B3 ENST00000286371.7 1811 7 29 -28 no_subtype FALSE canonical NA NA 828 None 132 4 0 FALSE 0 0 NA A coding 279 837 160 996 PB.1746.5 chr2 - 2102 5 novel_not_in_catalog ORMDL1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 63 None 2 14 0 FALSE 0 0 NA C coding 153 459 206 664 PB.543.1 chr1 + 3142 9 full-splice_match GNAI3 ENST00000369851.5 27174 9 44 23988 no_subtype FALSE canonical NA NA 1153 None 34 10 0 FALSE 0 0 NA A coding 354 1062 67 1128 PB.8505.1 chr16 + 1909 7 full-splice_match CHP2 ENST00000300113.2 2382 7 455 18 no_subtype FALSE canonical NA NA 505 None 24 5 0 FALSE 0 0 NA A coding 148 444 113 556 PB.5365.1 chr9 - 4376 35 novel_not_in_catalog IARS novel NA NA NA NA no_subtype TRUE canonical NA NA 123 None 20 4 0 TRUE 0 0 NA B coding 1262 3786 131 3916 PB.1746.1 chr2 - 1963 4 full-splice_match ORMDL1 ENST00000392350.7 2009 4 37 9 no_subtype FALSE canonical NA NA 59 None 7 11 0 FALSE 0 0 NA C coding 153 459 67 525 PB.9108.3 chr17 + 5562 12 novel_in_catalog CASC3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2998 None 2 24 0 FALSE 0 0 NA C coding 664 1992 5 1996 PB.2373.2 chr3 - 3109 2 antisense novelGene_SLC35A5_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 826 None 5 26 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5458.2 chr9 + 5824 1 incomplete-splice_match ZNF618 ENST00000288466.11 9109 14 2382 904 no_subtype FALSE canonical NA NA NA None 2 44 0 FALSE 0 0 NA C coding 30 90 211 300 PB.6519.2 chr11 + 1862 7 novel_not_in_catalog PLEKHB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1165 None 2 7 1 TRUE 0 0 NA C coding 189 567 96 662 PB.10783.3 chr22 - 3647 9 incomplete-splice_match MKL1 ENST00000407029.5 4091 12 440 4 5prime_fragment FALSE canonical NA NA 68 None 2 16 0 FALSE 0 0 NA C coding 851 2553 8 2560 PB.9108.2 chr17 + 4569 14 novel_not_in_catalog CASC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2178 None 2 12 0 FALSE 0 0 NA C coding 703 2109 26 2134 PB.6478.1 chr11 + 1722 10 novel_in_catalog TBC1D10C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1042 None 4 1 0 FALSE 0 0 NA C coding 446 1338 50 1387 PB.7295.1 chr12 + 939 1 full-splice_match RPS2P5 ENST00000488803.1 879 1 -23 -37 no_subtype FALSE canonical NA NA NA None 9 2 0 FALSE 0 0 NA A coding 275 825 78 902 PB.6478.2 chr11 + 1782 10 novel_not_in_catalog TBC1D10C novel NA NA NA NA no_subtype FALSE canonical NA NA 1105 None 11 1 0 TRUE 0 0 NA C coding 446 1338 113 1450 PB.11238.1 KI270722.1 + 1354 2 intergenic novelGene_3 novel NA NA NA NA no_subtype FALSE canonical NA NA 678 None 8 6 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7365.1 chr12 + 1433 1 intergenic novelGene_1091 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6478.3 chr11 + 1759 9 full-splice_match TBC1D10C ENST00000542590.1 1659 9 -72 -28 no_subtype FALSE canonical NA NA 1079 None 5 1 0 FALSE 0 0 NA C coding 446 1338 87 1424 PB.4422.1 chr7 + 1541 9 full-splice_match LANCL2 ENST00000254770.2 4353 9 595 2217 no_subtype FALSE canonical NA NA 1241 None 2 7 0 FALSE 0 0 NA A coding 432 1296 38 1333 PB.6478.4 chr11 + 1873 9 full-splice_match TBC1D10C ENST00000542590.1 1659 9 -189 -25 no_subtype FALSE canonical NA NA 1196 None 44 12 1 FALSE 0 0 NA C coding 446 1338 204 1541 PB.4233.2 chr6 - 649 1 incomplete-splice_match SOD2 ENST00000546260.5 4302 5 3170 484 no_subtype FALSE canonical NA NA NA None 9 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6013.2 chr10 - 3355 1 antisense novelGene_SLK_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6478.5 chr11 + 2892 6 novel_in_catalog TBC1D10C novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2212 None 10 6 0 FALSE 0 0 NA C coding 220 660 1898 2557 PB.5397.10 chr9 - 1822 5 novel_in_catalog TRIM14 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 232 None 2 2 0 FALSE 0 0 NA C coding 167 501 688 1188 PB.8638.1 chr16 - 1671 9 full-splice_match CIAPIN1 ENST00000394391.8 2182 9 124 387 no_subtype FALSE canonical NA NA 63 None 10 3 0 FALSE 0 0 NA C coding 312 936 119 1054 PB.8638.3 chr16 - 1536 1 novel_in_catalog CIAPIN1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9026.1 chr17 + 1268 7 full-splice_match NSRP1 ENST00000247026.9 2541 7 37 1236 no_subtype FALSE canonical NA NA 643 None 3 0 0 FALSE 0 0 NA C coding 414 1242 27 1268 PB.9026.2 chr17 + 1494 2 novel_not_in_catalog NSRP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 795 None 2 7 0 TRUE 0 0 NA C coding 138 414 358 771 PB.6478.7 chr11 + 2794 5 novel_in_catalog TBC1D10C novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2114 None 2 2 0 FALSE 0 0 NA C coding 220 660 1800 2459 PB.3613.2 chr5 + 2880 4 novel_not_in_catalog ITK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 811 None 2 13 1 TRUE 0 0 NA C coding 87 261 136 396 PB.6478.9 chr11 + 1766 10 novel_not_in_catalog TBC1D10C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1093 None 2 3 1 TRUE 0 0 NA C coding 446 1338 101 1438 PB.6511.2 chr11 - 5104 35 novel_not_in_catalog ARAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 65 None 4 13 0 TRUE 0 0 NA B coding 1439 4317 193 4509 PB.6511.3 chr11 - 5493 34 novel_not_in_catalog ARAP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 126 None 3 18 0 TRUE 0 0 NA B coding 1241 3723 254 3976 PB.3557.2 chr5 - 3118 1 antisense novelGene_ARHGAP26_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6511.6 chr11 - 5832 10 novel_not_in_catalog ARAP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 555 None 2 23 1 TRUE 0 0 NA B coding 508 1524 47 1570 PB.6083.3 chr10 - 2884 4 novel_not_in_catalog DHX32 novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 2 18 0 FALSE 0 0 NA B coding 286 858 351 1208 PB.4168.2 chr6 - 1246 7 novel_not_in_catalog FUCA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 178 None 2 1 0 TRUE 0 0 NA B coding 173 519 497 1015 PB.6511.5 chr11 - 6170 1 novel_in_catalog ARAP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA B coding 121 363 637 999 PB.4617.1 chr7 - 1705 1 novel_in_catalog LINC00998 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6645.1 chr11 - 1550 1 antisense novelGene_SDHD_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9846.1 chr19 - 1852 2 antisense novelGene_HSH2D_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1818 None 4 9 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9058.2 chr17 - 4103 9 novel_not_in_catalog RFFL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 181 None 7 23 1 TRUE 0 0 NA B coding 363 1089 190 1278 PB.6300.2 chr11 + 3399 32 novel_not_in_catalog DGKZ novel NA NA NA NA no_subtype FALSE canonical NA NA 2681 None 2 7 0 TRUE 0 0 NA B coding 929 2787 9 2795 PB.9233.1 chr17 - 1698 4 full-splice_match CHAD ENST00000508540.5 1789 4 86 5 no_subtype FALSE canonical NA NA 841 None 4 2 0 FALSE 0 0 NA A coding 359 1077 68 1144 PB.6300.1 chr11 + 3341 32 novel_not_in_catalog DGKZ novel NA NA NA NA no_subtype FALSE canonical NA NA 2623 None 28 8 0 TRUE 0 0 NA B coding 895 2685 53 2737 PB.1472.2 chr2 - 2767 9 incomplete-splice_match EIF2AK3 ENST00000419748.5 4222 17 1448 7 5prime_fragment FALSE canonical NA NA 78 None 4 6 0 FALSE 0 0 NA B coding 480 1440 337 1776 PB.8193.1 chr15 - 1836 14 full-splice_match HEXA ENST00000268097.9 5252 14 465 2951 no_subtype FALSE canonical NA NA 292 None 52 1 0 FALSE 0 0 NA A coding 529 1587 40 1626 PB.2635.1 chr3 + 3134 27 full-splice_match VPS8 ENST00000492449.5 2980 27 138 -292 no_subtype FALSE canonical NA NA 2406 None 2 5 0 FALSE 0 0 NA A coding 849 2547 7 2553 PB.8445.1 chr16 - 5501 4 genic_intron novelGene_101 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3793 None 2 44 3 FALSE 0 0 NA A coding 106 318 185 502 PB.4608.1 chr7 + 1558 2 genic_intron novelGene_990 novel NA NA NA NA no_subtype TRUE canonical NA NA 1105 None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10779.1 chr22 + 1145 1 incomplete-splice_match TNRC6B ENST00000301923.13 15958 24 5013 9801 no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1061.1 chr1 - 2516 4 full-splice_match DUSP10 ENST00000366899.3 2676 4 87 73 no_subtype FALSE canonical NA NA 109 None 2 8 0 FALSE 0 0 NA A coding 482 1446 153 1598 PB.907.1 chr1 + 3540 1 genic_intron novelGene_1342 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1653.1 chr2 - 2961 3 genic_intron novelGene_1262 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2814 None 2 19 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.5346.1 chr9 + 3379 3 full-splice_match RMI1 ENST00000445877.5 1553 3 3 -1829 no_subtype TRUE canonical NA NA 267 None 2 14 0 FALSE 0 0 NA A coding 625 1875 304 2178 PB.1457.6 chr2 - 2617 15 novel_not_in_catalog IMMT novel NA NA NA NA no_subtype FALSE non_canonical NA NA 95 None 2 7 2 TRUE 0 0 NA B coding 499 1497 791 2287 PB.6605.1 chr11 + 2830 2 full-splice_match JRKL ENST00000332349.4 2855 2 19 6 no_subtype FALSE canonical NA NA 61 None 21 14 0 FALSE 0 0 NA C coding 524 1572 229 1800 PB.6840.5 chr12 + 1974 1 incomplete-splice_match EMP1 ENST00000256951.9 5921 5 775 3173 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6840.4 chr12 + 2598 4 novel_in_catalog EMP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 361 None 7 12 0 FALSE 0 0 NA C coding 157 471 46 516 PB.5317.4 chr9 - 1677 8 novel_not_in_catalog PTAR1 novel NA NA NA NA no_subtype TRUE canonical NA NA 91 None 2 3 1 FALSE 0 0 NA B coding 350 1050 6 1055 PB.6840.1 chr12 + 2684 5 full-splice_match EMP1 ENST00000256951.9 5921 5 70 3167 no_subtype FALSE canonical NA NA 445 None 254 13 1 FALSE 0 0 NA C coding 157 471 130 600 PB.6840.3 chr12 + 3189 1 novel_in_catalog EMP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 29 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6840.2 chr12 + 2874 6 novel_not_in_catalog EMP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 638 None 2 14 1 FALSE 0 0 NA C coding 157 471 323 793 PB.9889.1 chr19 - 2846 2 antisense novelGene_CRTC1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2359 None 3 29 1 FALSE 0 0 NA A coding 168 504 1128 1631 PB.11205.4 chrX - 1798 4 full-splice_match MECP2 ENST00000303391.10 10505 4 39 8668 no_subtype FALSE canonical NA NA 113 None 15 1 0 FALSE 0 0 NA C coding 482 1446 224 1669 PB.4255.1 chr6 - 1630 12 full-splice_match PHF10 ENST00000339209.8 1719 12 84 5 no_subtype FALSE canonical NA NA 127 None 2 4 0 FALSE 0 0 NA A coding 498 1494 41 1534 PB.8104.1 chr15 - 2673 1 genic_intron novelGene_547 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7397.1 chr13 - 1863 7 incomplete-splice_match CENPJ ENST00000381884.8 4347 17 16 2468 internal_fragment FALSE canonical NA NA 104 None 2 2 0 FALSE 0 0 NA A coding 564 1692 171 1862 PB.11205.3 chrX - 7282 5 novel_not_in_catalog MECP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 114 None 2 50 0 TRUE 0 0 NA C coding 482 1446 225 1670 PB.8610.1 chr16 + 2147 4 incomplete-splice_match CHD9 ENST00000615216.4 10603 38 -42 8498 3prime_fragment FALSE canonical NA NA 2035 None 2 6 1 FALSE 0 0 NA B coding 632 1896 252 2147 PB.9042.2 chr17 - 6740 4 genic_intron novelGene_304 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 266 None 7 27 2 FALSE 0 0 NA B coding 179 537 5481 6017 PB.1444.3 chr2 - 1406 12 novel_not_in_catalog CAPG novel NA NA NA NA no_subtype FALSE canonical NA NA 52 None 7 1 1 TRUE 0 0 NA C coding 348 1044 221 1264 PB.4556.1 chr7 - 2231 18 novel_in_catalog LRCH4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 272 None 6 9 1 FALSE 0 0 NA A coding 652 1956 53 2008 PB.5922.2 chr10 + 3577 22 full-splice_match EXOC6 ENST00000260762.10 3564 22 -18 5 no_subtype FALSE canonical NA NA 2314 None 9 1 0 FALSE 0 0 NA C coding 804 2412 33 2444 PB.10792.1 chr22 + 4251 4 full-splice_match TEF ENST00000406644.7 4386 4 133 2 no_subtype FALSE canonical NA NA 673 None 2 19 0 FALSE 0 0 NA A coding 273 819 68 886 PB.3813.21 chr6 - 3705 26 novel_not_in_catalog BAG6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 223 None 3 4 0 FALSE 0 0 NA C coding 1122 3366 237 3602 PB.3813.20 chr6 - 3738 26 novel_not_in_catalog BAG6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 227 None 2 9 2 TRUE 0 0 NA C coding 1088 3264 241 3504 PB.3813.23 chr6 - 3591 25 novel_in_catalog BAG6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 147 None 15 4 0 FALSE 0 0 NA C coding 1113 3339 161 3499 PB.3813.22 chr6 - 3661 25 novel_not_in_catalog BAG6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 233 None 3 4 1 FALSE 0 0 NA C coding 1101 3303 247 3549 PB.3813.25 chr6 - 3659 26 novel_not_in_catalog BAG6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 237 None 3 24 3 TRUE 0 0 NA C coding 1040 3120 251 3370 PB.6820.2 chr12 - 3040 3 full-splice_match CD69 ENST00000416624.6 962 3 0 -2078 no_subtype FALSE canonical NA NA 145 None 3 14 0 FALSE 0 0 NA C coding 135 405 82 486 PB.6820.1 chr12 - 1668 5 full-splice_match CD69 ENST00000228434.7 1676 5 0 8 no_subtype FALSE canonical NA NA 145 None 19 5 0 FALSE 0 0 NA C coding 199 597 82 678 PB.3613.5 chr5 + 2999 6 novel_not_in_catalog ITK novel NA NA NA NA no_subtype FALSE canonical NA NA 1113 None 4 19 1 TRUE 0 0 NA C coding 206 618 116 733 PB.3813.28 chr6 - 3819 26 novel_not_in_catalog BAG6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 235 None 74 3 1 TRUE 0 0 NA C coding 1162 3486 248 3733 PB.6103.10 chr11 + 3535 11 novel_not_in_catalog ATHL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3433 None 2 20 1 TRUE 0 0 NA B coding 264 792 841 1632 PB.6619.1 chr11 - 3823 4 full-splice_match KBTBD3 ENST00000531837.1 2682 4 432 -1573 no_subtype TRUE canonical NA NA 22 None 5 9 0 FALSE 0 0 NA A coding 612 1836 236 2071 PB.9439.4 chr17 - 2412 12 novel_not_in_catalog P4HB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 208 None 2 11 3 TRUE 0 0 NA C coding 495 1485 64 1548 PB.9895.1 chr19 - 1795 13 novel_not_in_catalog TMEM161A novel NA NA NA NA no_subtype TRUE canonical NA NA 51 None 9 0 0 TRUE 0 0 NA A coding 479 1437 49 1485 PB.2593.1 chr3 - 1672 5 full-splice_match TNFSF10 ENST00000241261.6 1953 5 103 178 no_subtype FALSE canonical NA NA 152 None 30 6 0 FALSE 0 0 NA C coding 281 843 21 863 PB.5545.10 chr9 + 5671 44 novel_not_in_catalog SPTAN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5222 None 2 2 1 TRUE 0 0 NA B coding 1478 4434 268 4701 PB.7572.1 chr13 - 1466 2 full-splice_match RAB20 ENST00000267328.4 1518 2 40 12 no_subtype FALSE canonical NA NA 346 None 9 7 0 FALSE 0 0 NA A coding 234 702 175 876 PB.9208.1 chr17 - 1451 1 novel_in_catalog HOXB6 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA A coding 99 297 1125 1421 PB.4824.1 chr8 + 1934 9 novel_in_catalog POLR3D novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1166 None 2 4 0 FALSE 0 0 NA A coding 398 1194 93 1286 PB.8198.2 chr15 - 3916 5 novel_in_catalog NPTN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 120 None 7 22 0 FALSE 0 0 NA A coding 262 786 30 815 PB.2527.1 chr3 + 1505 11 novel_not_in_catalog RNF13 novel NA NA NA NA no_subtype TRUE canonical NA NA 885 None 42 6 0 TRUE 0 0 NA A coding 381 1143 105 1247 PB.5938.1 chr10 + 2582 1 antisense novelGene_TM9SF3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10213.1 chr20 + 2099 4 full-splice_match TRIB3 ENST00000217233.7 2499 4 398 2 no_subtype FALSE canonical NA NA 739 None 2 1 0 FALSE 0 0 NA A coding 358 1074 156 1229 PB.9356.1 chr17 + 3241 3 novel_not_in_catalog SLC16A5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1639 None 4 25 2 TRUE 0 0 NA A non_coding NA NA NA NA PB.833.1 chr1 - 3168 1 antisense novelGene_UCK2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8082.1 chr15 - 2838 1 genic_intron novelGene_506 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2084.1 chr3 - 2383 16 full-splice_match GLB1 ENST00000307363.9 2616 16 111 122 no_subtype FALSE canonical NA NA 109 None 12 2 0 FALSE 0 0 NA A coding 677 2031 35 2065 PB.7959.271 chr14 - 1866 8 fusion IGHV4-4,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 46 None 2 18 1 TRUE 0 0 NA B coding 375 1125 621 1745 PB.7959.272 chr14 - 1913 9 fusion IGHV4-34,IGHM novel NA NA NA NA no_subtype TRUE non_canonical NA NA 82 None 2 18 3 TRUE 0 0 NA B coding 375 1125 668 1792 PB.7959.273 chr14 - 1941 8 fusion IGHM,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 83 None 2 7 2 TRUE 0 0 NA B coding 375 1125 696 1820 PB.7959.274 chr14 - 1895 7 fusion IGHM,IGHV2-26 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 60 None 2 3 1 TRUE 0 0 NA A coding 587 1761 15 1775 PB.7959.275 chr14 - 1898 8 fusion IGHV4-4,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 14 1 TRUE 0 0 NA B coding 375 1125 654 1778 PB.7711.1 chr14 - 1554 4 full-splice_match BMP4 ENST00000559087.5 1708 4 -12 166 no_subtype FALSE canonical NA NA 65 None 4 4 0 FALSE 0 0 NA A coding 408 1224 198 1421 PB.7959.277 chr14 - 1896 9 fusion IGHV1-46,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 98 None 2 8 3 TRUE 0 0 NA A coding 375 1125 652 1776 PB.7959.278 chr14 - 1911 9 fusion IGHM,IGHV4-39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 85 None 2 12 2 TRUE 0 0 NA B coding 591 1773 19 1791 PB.7959.279 chr14 - 1930 9 fusion IGHM,IGHV4-39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 12 3 TRUE 0 0 NA B coding 375 1125 686 1810 PB.6828.1 chr12 + 1811 1 full-splice_match SMIM10L1 ENST00000622602.1 4795 1 -48 3032 no_subtype FALSE canonical NA NA NA None 4 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.136.1 chr1 + 1541 6 full-splice_match PITHD1 ENST00000246151.8 1603 6 56 6 no_subtype FALSE canonical NA NA 589 None 50 3 0 FALSE 0 0 NA A coding 211 633 56 688 PB.7959.132 chr14 - 1535 7 fusion IGHA1,IGHV3-49 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 123 None 2 13 1 TRUE 0 0 NA A coding 472 1416 78 1493 PB.2716.3 chr4 + 2689 13 novel_not_in_catalog SH3BP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2101 None 13 3 0 FALSE 0 0 NA B coding 440 1320 917 2236 PB.2716.2 chr4 + 2558 13 novel_not_in_catalog SH3BP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1967 None 5 3 0 FALSE 0 0 NA B coding 440 1320 783 2102 PB.2716.1 chr4 + 2573 13 novel_not_in_catalog SH3BP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1982 None 2 2 0 FALSE 0 0 NA B coding 440 1320 798 2117 PB.7959.131 chr14 - 1523 8 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 82 None 2 17 1 TRUE 0 0 NA B coding 261 783 697 1479 PB.7554.1 chr13 - 1364 2 full-splice_match GPR18 ENST00000397470.4 1468 2 76 28 no_subtype FALSE canonical NA NA 199 None 8 4 0 FALSE 0 0 NA A coding 331 993 234 1226 PB.787.10 chr1 - 1516 1 novel_in_catalog COPA novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.279.1 chr1 - 1485 5 full-splice_match MYCBP ENST00000397572.4 2818 5 785 548 no_subtype FALSE canonical NA NA 30 None 17 5 0 FALSE 0 0 NA A coding 103 309 16 324 PB.7554.2 chr13 - 1436 1 incomplete-splice_match GPR183 ENST00000376414.4 1700 2 67 198 no_subtype FALSE canonical NA NA NA None 42 4 0 FALSE 0 0 NA B coding 361 1083 19 1101 PB.1062.1 chr1 + 2962 25 novel_not_in_catalog MIA3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2125 None 2 5 0 TRUE 0 0 NA C coding 788 2364 70 2433 PB.2675.1 chr3 - 6183 26 novel_not_in_catalog ATP13A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 15 None 2 21 0 TRUE 0 0 NA A coding 962 2886 60 2945 PB.10506.1 chr21 - 1458 5 full-splice_match BTG3 ENST00000348354.6 1456 5 -10 8 no_subtype FALSE canonical NA NA 259 None 3 2 1 FALSE 0 0 NA A coding 252 756 268 1023 PB.6099.1 chr10 + 1712 7 full-splice_match PAOX ENST00000278060.9 1858 7 31 115 no_subtype TRUE canonical NA NA 1444 None 16 2 0 FALSE 0 0 NA A coding 511 1533 53 1585 PB.9525.2 chr18 - 5518 31 novel_not_in_catalog TRAPPC8 novel NA NA NA NA no_subtype TRUE canonical NA NA 556 None 2 23 0 TRUE 0 0 NA B coding 1435 4305 400 4704 PB.3447.1 chr5 + 1729 7 novel_in_catalog LMNB1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 947 None 3 5 0 FALSE 0 0 NA A coding 306 918 69 986 PB.5906.1 chr10 - 2812 2 genic RP11-80H5.9 novel NA NA NA NA no_subtype FALSE canonical NA NA 338 None 5 21 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.9257.1 chr17 - 3983 2 novel_in_catalog RP11-159D12.5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3755 None 2 40 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2823.1 chr4 + 3215 18 full-splice_match SLC30A9 ENST00000264451.11 6218 18 68 2935 no_subtype FALSE canonical NA NA 1774 None 44 11 0 FALSE 0 0 NA C coding 568 1704 113 1816 PB.9525.4 chr18 - 3790 21 incomplete-splice_match TRAPPC8 ENST00000582539.5 4391 29 1245 -644 5prime_fragment FALSE canonical NA NA 62 None 2 6 0 FALSE 0 0 NA B coding 980 2940 39 2978 PB.2823.3 chr4 + 2723 16 novel_in_catalog SLC30A9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1392 None 2 9 0 FALSE 0 0 NA C coding 328 984 451 1434 PB.1823.1 chr2 + 2929 12 full-splice_match FASTKD2 ENST00000236980.10 3188 12 258 1 no_subtype FALSE canonical NA NA 2103 None 15 11 2 FALSE 0 0 NA A coding 710 2130 91 2220 PB.1444.7 chr2 - 1568 11 novel_not_in_catalog CAPG novel NA NA NA NA no_subtype TRUE canonical NA NA 300 None 4 1 0 TRUE 0 0 NA C coding 348 1044 404 1447 PB.6378.3 chr11 - 2866 18 full-splice_match MTA2 ENST00000527204.5 2265 18 24 -625 no_subtype FALSE canonical NA NA 229 None 2 6 0 FALSE 0 0 NA C coding 495 1485 721 2205 PB.6378.2 chr11 - 2949 18 full-splice_match MTA2 ENST00000278823.6 3058 18 50 59 no_subtype FALSE canonical NA NA 368 None 196 5 0 FALSE 0 0 NA C coding 668 2004 341 2344 PB.1418.1 chr2 - 3469 2 antisense novelGene_CCT7_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1577 None 7 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1512.1 chr2 + 2879 2 genic_intron novelGene_920 novel NA NA NA NA no_subtype FALSE canonical NA NA 1737 None 2 16 0 FALSE 0 0 NA A coding 112 336 69 404 PB.7289.2 chr12 - 2888 1 genic_intron novelGene_1029 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5627.1 chr9 - 1478 6 full-splice_match AGPAT2 ENST00000371696.6 1512 6 27 7 no_subtype FALSE canonical NA NA 221 None 79 12 0 FALSE 0 0 NA A coding 278 834 40 873 PB.7705.1 chr14 + 1221 3 genic RP11-841O20.2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1072 None 6 12 2 TRUE 0 0 NA A non_coding NA NA NA NA PB.6037.1 chr10 - 3715 20 novel_not_in_catalog AFAP1L2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 111 None 3 12 1 TRUE 0 0 NA B coding 762 2286 264 2549 PB.8085.9 chr15 + 2721 1 incomplete-splice_match TMOD3 ENST00000308580.11 8255 10 1876 3659 no_subtype FALSE canonical NA NA NA None 5 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7596.2 chr14 + 1464 6 full-splice_match PNP ENST00000361505.9 1509 6 31 14 no_subtype FALSE canonical NA NA 767 None 5 3 0 FALSE 0 0 NA C coding 289 867 116 982 PB.7596.1 chr14 + 1468 6 novel_not_in_catalog PNP novel NA NA NA NA no_subtype FALSE canonical NA NA 777 None 2 1 0 FALSE 0 0 NA C coding 291 873 120 992 PB.2553.1 chr3 + 2569 18 full-splice_match GFM1 ENST00000486715.5 3721 18 300 852 no_subtype FALSE canonical NA NA 2181 None 31 4 0 FALSE 0 0 NA A coding 751 2253 58 2310 PB.3019.2 chr4 + 3181 1 incomplete-splice_match SYNPO2 ENST00000429713.6 9920 4 2295 4445 no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA B coding 348 1044 123 1166 PB.5859.1 chr10 + 1469 12 novel_not_in_catalog VDAC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 922 None 90 2 0 TRUE 0 0 NA A coding 283 849 163 1011 PB.9531.1 chr18 + 2880 2 antisense novelGene_ZNF24_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 432 None 2 31 0 FALSE 0 0 NA A coding 109 327 964 1290 PB.2833.2 chr4 + 3042 6 full-splice_match NIPAL1 ENST00000508180.1 708 6 -22 -2312 no_subtype FALSE canonical NA NA 678 None 17 13 0 FALSE 0 0 NA C coding 287 861 426 1286 PB.2833.1 chr4 + 3053 6 full-splice_match NIPAL1 ENST00000295461.9 5300 6 1 2246 no_subtype FALSE canonical NA NA 687 None 100 15 0 FALSE 0 0 NA C coding 410 1230 66 1295 PB.3381.1 chr5 - 3403 25 novel_not_in_catalog MCTP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 220 None 2 10 1 TRUE 0 0 NA A coding 778 2334 164 2497 PB.2833.4 chr4 + 2915 5 incomplete-splice_match NIPAL1 ENST00000295461.9 5300 6 127 2258 internal_fragment FALSE canonical NA NA 561 None 4 12 0 FALSE 0 0 NA C coding 287 861 309 1169 PB.10149.1 chr19 - 3773 6 novel_not_in_catalog ZNF841 novel NA NA NA NA no_subtype FALSE canonical NA NA 191 None 3 14 0 FALSE 0 0 NA B coding 924 2772 359 3130 PB.3556.6 chr5 + 3682 2 genic_intron novelGene_1200 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1542 None 2 20 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10149.2 chr19 - 3815 6 novel_not_in_catalog ZNF841 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 179 None 3 12 0 FALSE 0 0 NA B coding 924 2772 403 3174 PB.5172.3 chr8 + 3470 12 novel_not_in_catalog HSF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2880 None 4 24 2 TRUE 0 0 NA C coding 163 489 154 642 PB.7975.1 chr15 - 1704 1 novel_in_catalog MTMR10 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.886.1 chr1 - 1691 4 novel_not_in_catalog LINC00083 novel NA NA NA NA no_subtype FALSE canonical NA NA 443 None 2 9 0 FALSE 0 0 NA A coding 222 666 50 715 PB.4719.2 chr7 + 3235 2 antisense novelGene_KIAA1147_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3118 None 13 10 0 FALSE 0 0 NA B coding 111 333 1691 2023 PB.8707.1 chr16 + 2824 1 incomplete-splice_match SNTB2 ENST00000336278.8 9789 7 6960 6 no_subtype FALSE canonical NA NA NA None 8 31 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.757.1 chr1 + 3013 1 antisense novelGene_ETV3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5839.1 chr10 + 2934 8 full-splice_match MCU ENST00000373053.7 2949 8 12 3 no_subtype FALSE canonical NA NA 987 None 132 11 0 FALSE 0 0 NA C coding 351 1053 10 1062 PB.10685.2 chr22 - 1975 8 novel_not_in_catalog RHBDD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 234 None 6 4 0 FALSE 0 0 NA B coding 386 1158 630 1787 PB.4810.1 chr8 - 2845 2 antisense novelGene_PCM1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 27 None 3 11 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5241.1 chr9 - 2642 1 full-splice_match KLHL9 ENST00000359039.4 5710 1 0 3068 no_subtype FALSE canonical NA NA NA None 13 3 0 FALSE 0 0 NA A coding 608 1824 549 2372 PB.10685.1 chr22 - 3099 8 novel_not_in_catalog RHBDD3 novel NA NA NA NA no_subtype TRUE canonical NA NA 227 None 2 13 0 TRUE 0 0 NA B coding 389 1167 1739 2905 PB.5839.2 chr10 + 2959 8 novel_not_in_catalog MCU novel NA NA NA NA no_subtype FALSE canonical NA NA 1012 None 3 12 1 FALSE 0 0 NA C coding 109 327 761 1087 PB.7991.7 chr15 - 3419 1 genic_intron novelGene_379 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10574.1 chr21 - 3104 16 novel_not_in_catalog TMPRSS2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 40 None 85 5 0 TRUE 0 0 NA B coding 492 1476 97 1572 PB.8686.2 chr16 - 939 8 full-splice_match PSMB10 ENST00000358514.8 1218 8 258 21 no_subtype FALSE canonical NA NA 136 None 3 3 0 FALSE 0 0 NA C coding 273 819 81 899 PB.10574.3 chr21 - 3513 5 novel_not_in_catalog TMPRSS2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 74 None 7 26 2 TRUE 0 0 NA B coding 144 432 131 562 PB.10574.2 chr21 - 1741 15 novel_not_in_catalog TMPRSS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 74 None 3 2 0 TRUE 0 0 NA B coding 492 1476 131 1606 PB.6350.5 chr11 + 2568 7 novel_not_in_catalog MS4A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 764 None 4 10 2 FALSE 0 0 NA B coding 136 408 573 980 PB.9739.1 chr19 - 3036 11 novel_not_in_catalog ZNF558 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 65 None 2 11 1 TRUE 0 0 NA A coding 402 1206 673 1878 PB.1662.1 chr2 + 3662 3 genic_intron novelGene_1276 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2478 None 2 25 2 FALSE 0 0 NA A coding 112 336 812 1147 PB.4595.4 chr7 + 2830 11 full-splice_match HBP1 ENST00000222574.8 2829 11 -12 11 no_subtype FALSE canonical NA NA 1725 None 129 5 0 FALSE 0 0 NA C coding 514 1542 199 1740 PB.4595.5 chr7 + 1511 6 novel_in_catalog HBP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 850 None 2 1 0 FALSE 0 0 NA C coding 285 855 199 1053 PB.4595.6 chr7 + 2977 12 novel_in_catalog HBP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1865 None 5 5 0 FALSE 0 0 NA C coding 514 1542 339 1880 PB.3556.9 chr5 + 3763 1 genic_intron novelGene_1201 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 13 0 FALSE 0 0 NA B coding 101 303 1064 1366 PB.4267.1 chr7 - 2688 21 novel_not_in_catalog MAD1L1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 70 None 33 7 1 TRUE 0 0 NA B coding 718 2154 262 2415 PB.4267.2 chr7 - 2732 21 novel_not_in_catalog MAD1L1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 71 None 2 8 1 TRUE 0 0 NA B coding 735 2205 255 2459 PB.4595.3 chr7 + 1746 10 novel_in_catalog HBP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1576 None 13 0 0 FALSE 0 0 NA C coding 514 1542 192 1733 PB.2136.1 chr3 - 3129 9 full-splice_match CDCP1 ENST00000296129.5 6006 9 44 2833 no_subtype FALSE canonical NA NA 173 None 5 1 0 FALSE 0 0 NA C coding 836 2508 92 2599 PB.3456.1 chr5 + 2771 2 novel_not_in_catalog CDC42SE2 novel NA NA NA NA no_subtype FALSE canonical NA NA 753 None 2 27 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.2914.9 chr4 - 3950 25 novel_in_catalog SEC31A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 34 None 2 4 0 FALSE 0 0 NA C coding 1138 3414 124 3537 PB.1439.1 chr2 - 1012 9 full-splice_match SUCLG1 ENST00000393868.6 1475 9 236 227 no_subtype FALSE canonical NA NA 72 None 17 3 1 FALSE 0 0 NA C coding 332 996 15 1010 PB.4985.2 chr8 + 2719 2 genic_intron novelGene_733 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1144 None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9725.1 chr19 - 1298 9 full-splice_match CLEC4G ENST00000328853.9 1360 9 57 5 no_subtype FALSE canonical NA NA 67 None 25 1 0 FALSE 0 0 NA A coding 293 879 13 891 PB.10699.3 chr22 - 1430 8 incomplete-splice_match SF3A1 ENST00000215793.12 5143 16 1514 2199 5prime_fragment FALSE canonical NA NA 16 None 2 3 0 FALSE 0 0 NA C coding 285 855 166 1020 PB.10699.2 chr22 - 2625 16 full-splice_match SF3A1 ENST00000215793.12 5143 16 45 2473 no_subtype FALSE canonical NA NA 173 None 144 1 0 FALSE 0 0 NA C coding 793 2379 111 2489 PB.6144.1 chr11 - 2736 23 full-splice_match CARS ENST00000380525.8 2758 23 12 10 no_subtype FALSE canonical NA NA 83 None 10 3 0 FALSE 0 0 NA C coding 831 2493 59 2551 PB.6144.2 chr11 - 2473 22 novel_not_in_catalog CARS novel NA NA NA NA no_subtype FALSE canonical NA NA 68 None 2 4 0 TRUE 0 0 NA C coding 474 1422 44 1465 PB.6144.3 chr11 - 2926 21 novel_not_in_catalog CARS novel NA NA NA NA no_subtype FALSE canonical NA NA 51 None 2 20 5 FALSE 0 0 NA C coding 307 921 27 947 PB.3535.2 chr5 + 2900 3 novel_in_catalog WDR55 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 843 None 2 21 0 FALSE 0 0 NA C coding 137 411 95 505 PB.3535.1 chr5 + 2500 7 full-splice_match WDR55 ENST00000358337.9 4080 7 182 1398 no_subtype FALSE canonical NA NA 885 None 24 13 0 FALSE 0 0 NA C coding 383 1149 56 1204 PB.9176.1 chr17 - 1907 6 novel_not_in_catalog DCAKD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 46 None 2 14 1 TRUE 0 0 NA A coding 231 693 170 862 PB.517.4 chr1 + 1645 1 genic_intron novelGene_912 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7163.16 chr12 + 2490 1 novel_in_catalog PLXNC1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6027.2 chr10 - 3124 10 novel_not_in_catalog ZDHHC6 novel NA NA NA NA no_subtype FALSE canonical NA NA 249 None 2 13 0 FALSE 0 0 NA C coding 221 663 684 1346 PB.11005.2 chrX + 2974 1 novel_in_catalog MSN novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA B coding 73 219 143 361 PB.7499.1 chr13 + 1198 1 full-splice_match ST13P4 ENST00000495613.1 1093 1 -71 -34 no_subtype FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA A coding 240 720 72 791 PB.9439.3 chr17 - 2817 10 novel_in_catalog P4HB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 255 None 3 10 0 FALSE 0 0 NA C coding 513 1539 111 1649 PB.10000.1 chr19 + 4393 28 incomplete-splice_match LTBP4 ENST00000204005.13 5032 33 636 3 internal_fragment FALSE canonical NA NA 3973 None 2 10 0 FALSE 0 0 NA A coding 1077 3231 895 4125 PB.11005.1 chrX + 3757 12 novel_in_catalog MSN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1558 None 561 7 0 FALSE 0 0 NA B coding 566 1698 23 1720 PB.10156.4 chr19 - 3564 5 novel_not_in_catalog ZNF320 novel NA NA NA NA no_subtype FALSE canonical NA NA 624 None 2 14 0 TRUE 0 0 NA A coding 481 1443 698 2140 PB.2004.1 chr3 - 1380 5 full-splice_match VGLL4 ENST00000430365.6 1377 5 -20 17 no_subtype FALSE canonical NA NA 508 None 17 5 0 FALSE 0 0 NA C coding 291 873 442 1314 PB.2004.3 chr3 - 2650 1 incomplete-splice_match VGLL4 ENST00000273038.7 3725 6 1071 5 no_subtype FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2004.4 chr3 - 1594 6 novel_not_in_catalog VGLL4 novel NA NA NA NA no_subtype FALSE canonical NA NA 479 None 2 5 0 FALSE 0 0 NA C coding 178 534 413 946 PB.8618.3 chr16 - 1722 14 novel_not_in_catalog CES1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 85 None 2 5 1 TRUE 0 0 NA B coding 431 1293 234 1526 PB.924.1 chr1 - 2532 15 full-splice_match TRMT1L ENST00000367506.9 4392 15 88 1772 no_subtype FALSE canonical NA NA 416 None 32 21 0 FALSE 0 0 NA A coding 730 2190 191 2380 PB.11205.1 chrX - 6312 1 incomplete-splice_match MECP2 ENST00000303391.10 10505 4 1009 3185 no_subtype FALSE canonical NA NA NA None 6 36 0 FALSE 0 0 NA C coding 69 207 494 700 PB.5134.1 chr8 + 1619 1 antisense novelGene_ST3GAL1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9825.2 chr19 - 2109 2 genic_intron novelGene_116 novel NA NA NA NA no_subtype FALSE canonical NA NA 515 None 2 15 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8618.1 chr16 - 2017 15 novel_not_in_catalog CES1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 171 None 55 3 0 TRUE 0 0 NA B coding 567 1701 120 1820 PB.1734.2 chr2 - 3477 25 incomplete-splice_match NCKAP1 ENST00000360982.2 4989 32 1494 18 5prime_fragment FALSE canonical NA NA 24 None 4 2 0 FALSE 0 0 NA C coding 881 2643 25 2667 PB.2914.1 chr4 - 3870 27 novel_not_in_catalog SEC31A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 91 None 4 10 2 TRUE 0 0 NA C coding 842 2526 96 2621 PB.8350.1 chr16 - 1482 3 novel_not_in_catalog C16orf13 novel NA NA NA NA no_subtype TRUE canonical NA NA 240 None 2 14 1 TRUE 0 0 NA A coding 217 651 44 694 PB.8117.5 chr15 + 1784 10 novel_not_in_catalog FAM63B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1705 None 2 4 1 TRUE 0 0 NA C coding 340 1020 84 1103 PB.3599.1 chr5 + 5745 12 full-splice_match GALNT10 ENST00000297107.10 5961 12 212 4 no_subtype FALSE canonical NA NA 1578 None 2 19 0 FALSE 0 0 NA C coding 506 1518 217 1734 PB.10691.1 chr22 + 5974 17 full-splice_match NF2 ENST00000361166.8 1837 17 -350 -3787 no_subtype FALSE canonical NA NA 2132 None 2 23 1 FALSE 0 0 NA C coding 582 1746 375 2120 PB.1417.5 chr2 + 2861 1 novel_in_catalog CCT7 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 9 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3480.1 chr5 - 846 6 full-splice_match SKP1 ENST00000353411.10 9474 6 88 8540 no_subtype FALSE canonical NA NA 96 None 21 1 0 FALSE 0 0 NA A coding 163 489 97 585 PB.4450.1 chr7 - 2867 1 full-splice_match DNAJC30 ENST00000395176.2 2485 1 32 -414 no_subtype FALSE canonical NA NA NA None 13 20 0 FALSE 0 0 NA A coding 223 669 8 676 PB.251.2 chr1 - 4445 22 novel_not_in_catalog KIAA0319L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 181 None 10 7 0 TRUE 0 0 NA B coding 1049 3147 210 3356 PB.5967.4 chr10 - 2819 13 novel_not_in_catalog ERLIN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 72 None 66 11 0 TRUE 0 0 NA B coding 346 1038 90 1127 PB.3373.1 chr5 - 2057 1 genic_intron novelGene_827 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.251.1 chr1 - 4300 22 novel_not_in_catalog KIAA0319L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 32 None 3 12 1 TRUE 0 0 NA B coding 1049 3147 61 3207 PB.6657.4 chr11 - 3668 13 novel_not_in_catalog PCSK7 novel NA NA NA NA no_subtype FALSE canonical NA NA 31 None 2 15 1 TRUE 0 0 NA B coding 513 1539 164 1702 PB.11005.9 chrX + 2748 5 incomplete-splice_match MSN ENST00000360270.6 3944 13 1193 3 internal_fragment FALSE canonical NA NA 548 None 22 7 0 FALSE 0 0 NA B coding 230 690 21 710 PB.11.1 chr1 + 2463 16 full-splice_match ATAD3A ENST00000378756.7 2492 16 26 3 no_subtype FALSE canonical NA NA 1706 None 2 17 0 FALSE 0 0 NA A coding 586 1758 93 1850 PB.6625.1 chr11 - 2813 8 full-splice_match SLC35F2 ENST00000525815.5 3170 8 346 11 no_subtype FALSE canonical NA NA 185 None 10 10 0 FALSE 0 0 NA C coding 374 1122 76 1197 PB.2914.4 chr4 - 4275 28 novel_in_catalog SEC31A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 158 None 3 17 1 FALSE 0 0 NA C coding 1233 3699 163 3861 PB.5722.13 chr10 + 3054 11 novel_in_catalog WAC novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1601 None 2 6 0 FALSE 0 0 NA C coding 472 1416 253 1668 PB.5722.12 chr10 + 3564 1 novel_in_catalog WAC novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 36 0 FALSE 0 0 NA C coding 115 345 1467 1811 PB.2140.1 chr3 + 6999 8 full-splice_match LIMD1 ENST00000273317.4 11331 8 -744 5076 no_subtype FALSE canonical NA NA 2658 None 4 18 0 FALSE 0 0 NA C coding 676 2028 766 2793 PB.9099.6 chr17 - 2031 2 novel_not_in_catalog IKZF3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1606 None 2 14 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.9099.4 chr17 - 2636 2 novel_not_in_catalog IKZF3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 216 None 2 17 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.9099.5 chr17 - 3152 1 incomplete-splice_match IKZF3 ENST00000346872.7 9667 8 2897 3619 no_subtype FALSE canonical NA NA NA None 4 27 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9099.2 chr17 - 1030 1 incomplete-splice_match IKZF3 ENST00000346872.7 9667 8 8627 11 no_subtype FALSE canonical NA NA NA None 4 3 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9099.3 chr17 - 2521 2 novel_not_in_catalog IKZF3 novel NA NA NA NA no_subtype FALSE canonical NA NA 41 None 2 16 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.7323.2 chr12 - 1804 6 novel_not_in_catalog OASL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 222 None 2 16 1 TRUE 0 0 NA C coding 269 807 732 1538 PB.9099.1 chr17 - 2668 2 novel_not_in_catalog IKZF3 novel NA NA NA NA no_subtype FALSE canonical NA NA 256 None 16 16 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.722.4 chr1 - 1448 9 full-splice_match SCAMP3 ENST00000302631.7 1446 9 -7 5 no_subtype FALSE canonical NA NA 181 None 94 0 0 FALSE 0 0 NA A coding 347 1041 116 1156 PB.5860.1 chr10 - 2777 1 genic_intron novelGene_708 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9472.1 chr18 + 1596 3 full-splice_match TGIF1 ENST00000343820.9 2076 3 473 7 no_subtype FALSE canonical NA NA 556 None 19 2 0 FALSE 0 0 NA A coding 272 816 314 1129 PB.10447.1 chr20 - 3515 28 full-splice_match ATP9A ENST00000338821.5 8106 28 239 4352 no_subtype TRUE canonical NA NA 94 None 3 14 2 FALSE 0 0 NA A coding 1047 3141 27 3167 PB.10556.1 chr21 + 4175 17 full-splice_match MORC3 ENST00000400485.5 4246 17 52 19 no_subtype TRUE canonical NA NA 2690 None 41 4 0 FALSE 0 0 NA C coding 939 2817 25 2841 PB.7780.2 chr14 - 3029 22 novel_not_in_catalog ACTN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 287 None 198 1 0 TRUE 0 0 NA B coding 892 2676 183 2858 PB.10556.2 chr21 + 2919 11 novel_not_in_catalog MORC3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1190 None 2 22 4 TRUE 0 0 NA C coding 363 1089 15 1103 PB.5847.3 chr10 - 3252 3 novel_not_in_catalog PPP3CB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1424 None 2 14 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.5847.2 chr10 - 2991 14 full-splice_match PPP3CB ENST00000394829.6 3149 14 156 2 no_subtype FALSE canonical NA NA 64 None 4 2 1 FALSE 0 0 NA C coding 439 1317 238 1554 PB.9316.3 chr17 - 3618 12 novel_not_in_catalog PSMD12 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 182 None 10 20 1 TRUE 0 0 NA C coding 456 1368 75 1442 PB.586.1 chr1 + 2542 1 incomplete-splice_match HIPK1 ENST00000361587.3 5766 7 3216 9 no_subtype FALSE canonical NA NA NA None 7 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5568.1 chr9 - 5416 18 novel_not_in_catalog FNBP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 268 None 2 38 4 TRUE 0 0 NA B coding 613 1839 245 2083 PB.4603.1 chr7 + 2297 14 full-splice_match DLD ENST00000205402.9 3755 14 222 1236 no_subtype FALSE canonical NA NA 1523 None 7 4 0 FALSE 0 0 NA A coding 509 1527 60 1586 PB.1561.1 chr2 + 2585 6 full-splice_match INSIG2 ENST00000245787.8 2590 6 0 5 no_subtype FALSE canonical NA NA 842 None 10 10 0 FALSE 0 0 NA A coding 225 675 207 881 PB.3176.1 chr5 + 3207 7 novel_not_in_catalog SNHG18 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 857 None 2 34 2 TRUE 0 0 NA A coding 149 447 1568 2014 PB.10292.2 chr20 - 1571 6 novel_in_catalog CRNKL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 150 None 2 12 0 FALSE 0 0 NA C coding 276 828 100 927 PB.10292.3 chr20 - 1440 2 novel_in_catalog CRNKL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 104 None 4 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10292.1 chr20 - 2210 14 full-splice_match CRNKL1 ENST00000536226.1 4009 14 27 1772 no_subtype FALSE canonical NA NA 148 None 22 7 0 FALSE 0 0 NA C coding 687 2061 98 2158 PB.3636.22 chr5 + 1370 7 novel_in_catalog DOCK2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 788 None 3 0 0 FALSE 0 0 NA B coding 229 687 162 848 PB.7631.1 chr14 - 3506 30 full-splice_match IPO4 ENST00000354464.10 3646 30 131 9 no_subtype FALSE canonical NA NA 115 None 18 0 0 FALSE 0 0 NA A coding 1081 3243 47 3289 PB.7631.2 chr14 - 5582 4 genic RP11-468E2.11 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3277 None 4 31 2 FALSE 0 0 NA A coding 132 396 2020 2415 PB.7631.3 chr14 - 981 6 full-splice_match CHMP4A ENST00000609024.5 735 6 -9 -237 no_subtype FALSE canonical NA NA 89 None 6 1 0 FALSE 0 0 NA A coding 222 666 59 724 PB.9085.1 chr17 + 740 6 full-splice_match PSMB3 ENST00000619426.4 773 6 25 8 no_subtype FALSE canonical NA NA 635 None 3 1 0 FALSE 0 0 NA C coding 194 582 100 681 PB.4115.2 chr6 + 3778 1 novel_in_catalog HINT3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA B coding 134 402 105 506 PB.9085.2 chr17 + 5582 3 genic PSMB3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1983 None 2 49 1 TRUE 0 0 NA C coding 105 315 4954 5268 PB.5132.10 chr8 - 1545 1 novel_in_catalog SLA novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 8 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5548.1 chr9 - 1627 1 antisense novelGene_SET_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 14 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1567.2 chr2 + 2162 5 full-splice_match RALB ENST00000420510.5 1252 5 126 -1036 no_subtype FALSE canonical NA NA 601 None 14 5 0 FALSE 0 0 NA C coding 206 618 101 718 PB.3192.1 chr5 + 3909 12 full-splice_match CDH6 ENST00000265071.2 8476 12 0 4567 no_subtype FALSE canonical NA NA 2147 None 2 4 0 FALSE 0 0 NA A coding 790 2370 266 2635 PB.2185.1 chr3 - 1637 14 full-splice_match IMPDH2 ENST00000326739.8 1643 14 -8 14 no_subtype FALSE canonical NA NA 146 None 81 3 0 FALSE 0 0 NA C coding 514 1542 49 1590 PB.9372.1 chr17 + 5876 40 novel_not_in_catalog ITGB4 novel NA NA NA NA no_subtype FALSE canonical NA NA 5475 None 2 7 0 FALSE 0 0 NA A coding 1752 5256 357 5612 PB.4320.1 chr7 - 3656 1 novel_in_catalog RAPGEF5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A coding 121 363 2702 3064 PB.2825.1 chr4 + 1634 1 genic_intron novelGene_423 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.93 chr14 - 1425 9 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 83 None 2 10 3 TRUE 0 0 NA B coding 240 720 661 1380 PB.7216.1 chr12 + 2915 9 full-splice_match RIC8B ENST00000392839.6 2440 9 20 -495 no_subtype FALSE canonical NA NA 1537 None 2 5 0 FALSE 0 0 NA A coding 520 1560 87 1646 PB.263.4 chr1 - 1572 1 incomplete-splice_match STK40 ENST00000373132.3 3621 11 2040 10 no_subtype FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4774.2 chr7 + 1543 8 full-splice_match DNAJB6 ENST00000429029.6 1609 8 52 14 no_subtype FALSE canonical NA NA 773 None 34 1 0 FALSE 0 0 NA C coding 241 723 154 876 PB.263.1 chr1 - 1725 11 full-splice_match STK40 ENST00000373132.3 3621 11 20 1876 no_subtype FALSE canonical NA NA 154 None 131 1 0 FALSE 0 0 NA C coding 435 1305 163 1467 PB.263.3 chr1 - 3582 11 novel_in_catalog STK40 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 142 None 2 8 0 FALSE 0 0 NA C coding 440 1320 136 1455 PB.5334.1 chr9 + 3339 1 novel_in_catalog VPS13A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A coding 106 318 2178 2495 PB.7065.1 chr12 + 2675 4 novel_not_in_catalog METTL21B novel NA NA NA NA no_subtype FALSE canonical NA NA 2500 None 4 19 1 TRUE 0 0 NA A coding 226 678 115 792 PB.1554.1 chr2 + 5666 16 novel_not_in_catalog PSD4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3916 None 6 16 0 FALSE 0 0 NA B coding 867 2601 202 2802 PB.6691.1 chr11 + 2781 1 full-splice_match RNF26 ENST00000311413.4 2787 1 0 6 no_subtype FALSE canonical NA NA NA None 157 4 0 FALSE 0 0 NA A coding 433 1299 597 1895 PB.608.1 chr1 - 4185 1 antisense novelGene_FAM46C_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 32 0 FALSE 0 0 NA A coding 101 303 3375 3677 PB.4638.1 chr7 - 2910 18 full-splice_match POT1 ENST00000393329.5 3950 18 169 871 no_subtype FALSE canonical NA NA 21 None 2 5 1 FALSE 0 0 NA C coding 503 1509 695 2203 PB.6922.1 chr12 - 2437 2 full-splice_match AMIGO2 ENST00000266581.4 3763 2 91 1235 no_subtype FALSE canonical NA NA 313 None 5 10 0 FALSE 0 0 NA A coding 522 1566 377 1942 PB.7307.6 chr12 - 2945 1 novel_in_catalog PXN novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 13 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7307.7 chr12 - 3627 11 novel_in_catalog PXN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 101 None 5 11 0 FALSE 0 0 NA C coding 424 1272 488 1759 PB.11057.1 chrX - 4460 1 full-splice_match HK2P1 ENST00000447818.2 2737 1 -433 -1290 no_subtype FALSE canonical NA NA NA None 32 6 0 FALSE 0 0 NA A coding 480 1440 845 2284 PB.1202.2 chr2 - 3663 28 novel_not_in_catalog SMC6 novel NA NA NA NA no_subtype TRUE canonical NA NA 181 None 28 4 1 TRUE 0 0 NA B coding 1091 3273 187 3459 PB.8332.1 chr15 - 1199 6 full-splice_match VIMP ENST00000526049.5 1188 6 -28 17 no_subtype FALSE canonical NA NA 133 None 7 2 0 FALSE 0 0 NA C coding 187 561 58 618 PB.7307.1 chr12 - 3675 12 novel_not_in_catalog PXN novel NA NA NA NA no_subtype FALSE non_canonical NA NA 114 None 85 10 0 TRUE 0 0 NA C coding 557 1671 102 1772 PB.9960.3 chr19 + 3045 6 novel_in_catalog ZNF420 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 467 None 2 6 0 FALSE 0 0 NA C coding 617 1851 545 2395 PB.9960.2 chr19 + 3031 6 novel_not_in_catalog ZNF420 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 454 None 3 11 1 FALSE 0 0 NA C coding 617 1851 532 2382 PB.9960.1 chr19 + 2959 5 full-splice_match ZNF420 ENST00000337995.3 3535 5 -30 606 no_subtype FALSE canonical NA NA 381 None 26 10 0 FALSE 0 0 NA C coding 688 2064 246 2309 PB.25.5 chr1 + 3765 16 novel_not_in_catalog KCNAB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3528 None 3 30 2 TRUE 0 0 NA B coding 349 1047 123 1169 PB.4371.2 chr7 + 2301 13 full-splice_match SEPT7 ENST00000350320.10 4350 13 245 1804 no_subtype FALSE non_canonical NA NA 1253 None 17 5 0 FALSE 0 0 NA C coding 418 1254 37 1290 PB.2629.6 chr3 + 5700 32 novel_in_catalog EIF4G1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5071 None 2 7 0 FALSE 0 0 NA B coding 1559 4677 574 5250 PB.6039.5 chr10 - 5654 1 genic_intron novelGene_1016 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1417.1 chr2 + 1819 12 novel_not_in_catalog CCT7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1454 None 109 2 1 FALSE 0 0 NA B coding 486 1458 41 1498 PB.4081.1 chr6 - 2663 9 full-splice_match WASF1 ENST00000392587.6 2675 9 10 2 no_subtype FALSE canonical NA NA 254 None 2 4 0 FALSE 0 0 NA A coding 559 1677 283 1959 PB.6039.1 chr10 - 1028 1 incomplete-splice_match ABLIM1 ENST00000392952.7 6841 18 5150 664 no_subtype FALSE canonical NA NA NA None 39 5 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5273.1 chr9 - 763 5 novel_not_in_catalog CCL21 novel NA NA NA NA no_subtype FALSE canonical NA NA 137 None 2 1 1 TRUE 0 0 NA C coding 134 402 71 472 PB.5273.2 chr9 - 849 4 full-splice_match CCL21 ENST00000259607.6 852 4 -13 16 no_subtype FALSE canonical NA NA 138 None 28 1 1 FALSE 0 0 NA C coding 134 402 72 473 PB.8814.1 chr16 - 2305 8 novel_not_in_catalog CHMP1A novel NA NA NA NA no_subtype FALSE canonical NA NA 115 None 6 22 1 TRUE 0 0 NA A coding 196 588 109 696 PB.2450.6 chr3 + 3183 12 novel_not_in_catalog ABTB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2530 None 5 11 1 TRUE 0 0 NA C coding 336 1008 1727 2734 PB.6284.2 chr11 + 3536 2 novel_not_in_catalog TTC17 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3177 None 2 20 1 TRUE 0 0 NA C coding 118 354 2965 3318 PB.6284.1 chr11 - 1660 2 genic_intron novelGene_431 novel NA NA NA NA no_subtype TRUE canonical NA NA 672 None 7 5 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1675.1 chr2 - 4209 1 genic_intron novelGene_1295 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 35 0 FALSE 0 0 NA A coding 114 342 2346 2687 PB.3992.6 chr6 - 1614 8 novel_not_in_catalog EEF1A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 33 None 4 0 0 TRUE 0 0 NA C coding 418 1254 64 1317 PB.9940.1 chr19 + 1628 2 novel_not_in_catalog FFAR2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 121 None 3 4 0 TRUE 0 0 NA A coding 330 990 125 1114 PB.10966.1 chrX - 1269 3 full-splice_match PRAF2 ENST00000553851.2 1334 3 54 11 no_subtype FALSE canonical NA NA 209 None 2 2 0 FALSE 0 0 NA A coding 178 534 31 564 PB.7659.2 chr14 - 4580 20 incomplete-splice_match BAZ1A ENST00000382422.6 5775 26 1189 6 5prime_fragment TRUE canonical NA NA 100 None 2 4 0 FALSE 0 0 NA A coding 1240 3720 88 3807 PB.1232.2 chr2 - 3010 18 novel_not_in_catalog SLC5A6 novel NA NA NA NA no_subtype FALSE canonical NA NA 61 None 6 12 1 TRUE 0 0 NA A coding 615 1845 329 2173 PB.3807.1 chr6 + 1411 4 full-splice_match LTA ENST00000418386.2 1422 4 6 5 no_subtype FALSE canonical NA NA 372 None 5 1 0 FALSE 0 0 NA A coding 205 615 168 782 PB.4896.1 chr8 + 3507 9 novel_in_catalog AP3M2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1288 None 2 14 0 FALSE 0 0 NA B coding 418 1254 133 1386 PB.7850.1 chr14 - 1822 2 genic_intron novelGene_812 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 729 None 2 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9259.1 chr17 + 2631 13 full-splice_match EPX ENST00000225371.5 2708 13 75 2 no_subtype FALSE canonical NA NA 2194 None 44 0 0 FALSE 0 0 NA C coding 715 2145 36 2180 PB.9259.3 chr17 + 2696 13 novel_not_in_catalog EPX novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2260 None 3 0 0 FALSE 0 0 NA C coding 709 2127 120 2246 PB.894.6 chr1 + 2664 15 novel_not_in_catalog TOR1AIP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2588 None 4 14 3 TRUE 0 0 NA B coding 478 1434 51 1484 PB.9451.1 chr17 + 1935 6 novel_not_in_catalog SLC16A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1795 None 8 2 0 TRUE 0 0 NA B coding 465 1395 63 1457 PB.3103.1 chr4 - 1823 15 full-splice_match PLRG1 ENST00000499023.6 3351 15 14 1514 no_subtype TRUE canonical NA NA 122 None 35 3 0 FALSE 0 0 NA A coding 514 1542 114 1655 PB.795.7 chr1 - 2837 3 novel_not_in_catalog CD48 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 143 None 4 16 1 TRUE 0 0 NA C coding 109 327 188 514 PB.8483.1 chr16 - 2912 1 incomplete-splice_match DCUN1D3 ENST00000324344.8 6162 3 3248 3 no_subtype FALSE canonical NA NA NA None 17 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.795.5 chr1 - 2853 3 novel_not_in_catalog CD48 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 155 None 3 17 1 TRUE 0 0 NA C coding 151 453 74 526 PB.795.3 chr1 - 1102 4 full-splice_match CD48 ENST00000368046.7 1126 4 15 9 no_subtype FALSE canonical NA NA 155 None 2 4 0 FALSE 0 0 NA C coding 243 729 74 802 PB.795.2 chr1 - 3176 4 novel_not_in_catalog CD48 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 179 None 10 15 1 TRUE 0 0 NA C coding 220 660 194 853 PB.247.1 chr1 - 4233 16 novel_in_catalog ZMYM6 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 60 None 2 7 1 FALSE 0 0 NA A coding 1325 3975 135 4109 PB.7264.2 chr12 - 3227 5 novel_not_in_catalog MAPKAPK5-AS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 264 None 2 16 1 TRUE 0 0 NA B coding 218 654 520 1173 PB.8479.2 chr16 - 3021 5 novel_not_in_catalog GPRC5B novel NA NA NA NA no_subtype FALSE canonical NA NA 109 None 3 10 1 TRUE 0 0 NA C coding 429 1287 211 1497 PB.8479.1 chr16 - 2883 4 full-splice_match GPRC5B ENST00000300571.6 5213 4 42 2288 no_subtype FALSE canonical NA NA 149 None 45 6 0 FALSE 0 0 NA C coding 403 1209 151 1359 PB.3992.1 chr6 - 1694 8 full-splice_match EEF1A1 ENST00000309268.10 2303 8 556 53 no_subtype FALSE canonical NA NA 33 None 5063 0 0 FALSE 0 0 NA C coding 462 1386 64 1449 PB.7840.1 chr14 - 2119 14 full-splice_match SNW1 ENST00000261531.11 2163 14 36 8 no_subtype FALSE canonical NA NA 41 None 11 4 0 FALSE 0 0 NA A coding 536 1608 28 1635 PB.3571.3 chr5 - 4032 11 full-splice_match CSNK1A1 ENST00000515768.5 1098 11 -425 -2509 no_subtype FALSE canonical NA NA 548 None 3 12 0 FALSE 0 0 NA C coding 365 1095 426 1520 PB.4230.1 chr6 - 1600 8 full-splice_match RSPH3 ENST00000252655.1 2175 8 434 141 no_subtype FALSE canonical NA NA 298 None 2 2 0 FALSE 0 0 NA A coding 418 1254 183 1436 PB.11071.1 chrX + 2790 1 genic_intron novelGene_887 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.144.2 chr1 - 1580 3 novel_in_catalog IL22RA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 115 None 6 4 0 FALSE 0 0 NA C coding 167 501 73 573 PB.144.1 chr1 - 2779 7 full-splice_match IL22RA1 ENST00000270800.1 2798 7 17 2 no_subtype FALSE canonical NA NA 65 None 12 2 0 FALSE 0 0 NA C coding 574 1722 23 1744 PB.3066.1 chr4 + 3527 18 full-splice_match ABCE1 ENST00000296577.8 3921 18 379 15 no_subtype FALSE canonical NA NA 1888 None 50 10 0 FALSE 0 0 NA A coding 599 1797 137 1933 PB.9456.1 chr17 + 5855 7 novel_not_in_catalog FOXK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 4771 None 2 48 2 FALSE 0 0 NA A coding 295 885 3677 4561 PB.857.1 chr1 - 1466 2 full-splice_match METTL18 ENST00000310392.4 1521 2 49 6 no_subtype FALSE canonical NA NA 103 None 5 3 0 FALSE 0 0 NA A coding 372 1116 306 1421 PB.4741.1 chr7 + 884 2 full-splice_match GIMAP7 ENST00000313543.4 1256 2 42 330 no_subtype FALSE canonical NA NA 74 None 15 0 0 FALSE 0 0 NA A coding 256 768 116 883 PB.11035.2 chrX - 3110 2 genic_intron novelGene_697 novel NA NA NA NA no_subtype TRUE canonical NA NA 24 None 4 18 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.4000.2 chr6 + 2959 26 incomplete-splice_match MYO6 ENST00000369977.7 5597 35 -34 2672 3prime_fragment FALSE canonical NA NA 2831 None 56 2 0 FALSE 0 0 NA B coding 928 2784 174 2957 PB.10228.11 chr20 - 1989 7 novel_not_in_catalog SIRPB1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 107 None 2 11 4 TRUE 0 0 NA B coding 107 321 1396 1716 PB.10228.10 chr20 - 1638 1 genic_intron novelGene_15 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA A coding 99 297 1296 1592 PB.4302.1 chr7 + 3148 16 full-splice_match SCIN ENST00000297029.9 9713 16 66 6499 no_subtype FALSE canonical NA NA 2055 None 28 5 0 FALSE 0 0 NA A coding 715 2145 36 2180 PB.10228.15 chr20 - 2813 4 novel_not_in_catalog SIRPG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 135 None 2 15 3 TRUE 0 0 NA A coding 167 501 63 563 PB.1474.8 chr2 - 940 5 novel_not_in_catalog IGKV2-30 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 83 None 2 12 2 TRUE 0 0 NA A coding 110 330 35 364 PB.8419.2 chr16 - 1501 10 novel_in_catalog ROGDI novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 94 None 4 7 0 FALSE 0 0 NA B coding 232 696 50 745 PB.1410.1 chr2 - 2712 5 genic PAIP2B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1066 None 2 24 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.3571.7 chr5 - 2596 4 novel_not_in_catalog CSNK1A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 599 None 4 9 1 TRUE 0 0 NA C coding 127 381 477 857 PB.792.2 chr1 + 3151 2 antisense novelGene_CD84_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 3111 None 2 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3929.2 chr6 + 2833 16 novel_not_in_catalog PPP2R5D novel NA NA NA NA no_subtype FALSE canonical NA NA 1643 None 8 4 0 TRUE 0 0 NA C coding 563 1689 90 1778 PB.3571.6 chr5 - 3256 1 novel_in_catalog CSNK1A1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2467.1 chr3 - 2068 8 full-splice_match MBD4 ENST00000429544.6 2478 8 79 331 no_subtype FALSE canonical NA NA 221 None 2 5 0 FALSE 0 0 NA A coding 574 1722 118 1839 PB.3929.3 chr6 + 2875 16 novel_not_in_catalog PPP2R5D novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1687 None 6 7 1 TRUE 0 0 NA C coding 570 1710 113 1822 PB.7170.2 chr12 + 1897 11 full-splice_match METAP2 ENST00000323666.9 3601 11 219 1485 no_subtype FALSE canonical NA NA 1194 None 18 0 0 FALSE 0 0 NA C coding 478 1434 11 1444 PB.3795.9 chr6 + 2894 10 novel_not_in_catalog BTN2A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2429 None 5 4 1 FALSE 0 0 NA C coding 358 1074 83 1156 PB.3795.8 chr6 + 2716 9 novel_not_in_catalog BTN2A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1105 None 2 8 0 FALSE 0 0 NA C coding 300 900 207 1106 PB.3795.7 chr6 + 2649 8 novel_not_in_catalog BTN2A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1035 None 5 7 0 FALSE 0 0 NA C coding 478 1434 192 1625 PB.3795.6 chr6 + 2789 9 novel_not_in_catalog BTN2A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2336 None 2 7 0 FALSE 0 0 NA C coding 523 1569 84 1652 PB.3795.5 chr6 + 2760 9 novel_not_in_catalog BTN2A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1144 None 5 4 0 FALSE 0 0 NA C coding 345 1035 111 1145 PB.3795.4 chr6 + 2760 9 novel_not_in_catalog BTN2A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1145 None 14 5 2 FALSE 0 0 NA C coding 358 1074 73 1146 PB.3795.3 chr6 + 2776 9 novel_not_in_catalog BTN2A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1172 None 5 7 2 FALSE 0 0 NA C coding 313 939 235 1173 PB.3795.2 chr6 + 2675 8 full-splice_match BTN2A2 ENST00000356709.8 3590 8 29 886 no_subtype FALSE canonical NA NA 1061 None 15 3 0 FALSE 0 0 NA C coding 523 1569 83 1651 PB.3795.1 chr6 + 2616 5 novel_not_in_catalog BTN3A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 924 None 2 11 0 TRUE 0 0 NA B coding 157 471 148 618 PB.5789.1 chr10 + 3323 3 full-splice_match CISD1 ENST00000333926.5 2479 3 192 -1036 no_subtype FALSE canonical NA NA 261 None 3 24 0 FALSE 0 0 NA A coding 108 324 25 348 PB.5142.3 chr8 + 7424 23 novel_not_in_catalog DENND3 novel NA NA NA NA no_subtype FALSE canonical NA NA 6706 None 2 58 2 TRUE 0 0 NA B coding 1099 3297 82 3378 PB.5142.2 chr8 + 5395 25 novel_not_in_catalog DENND3 novel NA NA NA NA no_subtype FALSE canonical NA NA 4684 None 104 15 2 TRUE 0 0 NA B coding 1099 3297 49 3345 PB.2852.3 chr4 - 1442 4 novel_not_in_catalog HOPX novel NA NA NA NA no_subtype FALSE canonical NA NA 366 None 2 6 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.4991.1 chr8 + 3365 3 novel_in_catalog FABP5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3106 None 4 33 0 FALSE 0 0 NA C coding 101 303 2855 3157 PB.4991.2 chr8 + 667 4 full-splice_match FABP5 ENST00000297258.10 851 4 180 4 no_subtype FALSE canonical NA NA 407 None 2 2 0 FALSE 0 0 NA C coding 135 405 54 458 PB.1107.1 chr1 + 5570 10 full-splice_match URB2 ENST00000258243.6 5613 10 36 7 no_subtype FALSE canonical NA NA 4477 None 7 6 0 FALSE 0 0 NA A coding 1524 4572 101 4672 PB.5142.8 chr8 + 5573 5 novel_not_in_catalog DENND3 novel NA NA NA NA no_subtype FALSE canonical NA NA 4856 None 2 32 2 TRUE 0 0 NA B coding 146 438 3622 4059 PB.7136.16 chr12 - 3209 3 novel_not_in_catalog PPP1R12A novel NA NA NA NA no_subtype FALSE canonical NA NA 441 None 3 19 1 TRUE 0 0 NA C coding 121 363 211 573 PB.7136.17 chr12 - 1610 2 novel_in_catalog PPP1R12A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 441 None 2 6 0 FALSE 0 0 NA C coding 121 363 211 573 PB.7136.14 chr12 - 6489 6 novel_not_in_catalog PPP1R12A novel NA NA NA NA no_subtype FALSE canonical NA NA 461 None 2 54 1 TRUE 0 0 NA C coding 269 807 231 1037 PB.7136.15 chr12 - 2647 7 genic_intron novelGene_743 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 127 None 2 14 6 FALSE 0 0 NA A non_coding NA NA NA NA PB.7136.12 chr12 - 2150 16 incomplete-splice_match PPP1R12A ENST00000437004.6 4639 25 131 2358 internal_fragment FALSE canonical NA NA 234 None 2 0 0 FALSE 0 0 NA C coding 715 2145 4 2148 PB.7136.13 chr12 - 1790 12 incomplete-splice_match PPP1R12A ENST00000547330.5 2275 15 -5 490 internal_fragment FALSE canonical NA NA 441 None 2 0 0 FALSE 0 0 NA C coding 526 1578 211 1788 PB.7136.10 chr12 - 2766 15 novel_in_catalog PPP1R12A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 439 None 2 3 0 FALSE 0 0 NA C coding 606 1818 209 2026 PB.2149.1 chr3 + 2840 1 novel_in_catalog CCR2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 5 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3777.1 chr6 + 1092 1 full-splice_match SOX4 ENST00000244745.3 5852 1 4755 5 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5561.1 chr9 + 2637 11 novel_not_in_catalog PTPA novel NA NA NA NA no_subtype FALSE canonical NA NA 1080 None 91 5 0 TRUE 0 0 NA C coding 323 969 187 1155 PB.6889.2 chr12 - 3475 12 incomplete-splice_match IPO8 ENST00000256079.8 5325 25 1845 5 5prime_fragment FALSE canonical NA NA 88 None 2 18 0 FALSE 0 0 NA A coding 526 1578 28 1605 PB.9813.4 chr19 + 1534 8 novel_in_catalog CCDC130 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 834 None 3 4 1 FALSE 0 0 NA C coding 251 753 558 1310 PB.669.1 chr1 - 2828 1 novel_in_catalog CDC42SE1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA C coding 109 327 789 1115 PB.1794.8 chr2 - 1501 1 full-splice_match Y_RNA ENST00000516950.1 96 1 -1410 5 no_subtype FALSE canonical NA NA NA None 5 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9178.1 chr17 + 1849 10 novel_not_in_catalog ACBD4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1112 None 2 7 2 FALSE 0 0 NA A coding 306 918 321 1238 PB.2862.1 chr4 + 1290 6 novel_not_in_catalog FDCSP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 369 None 3 5 2 TRUE 0 0 NA B coding 85 255 57 311 PB.10337.2 chr20 - 2906 2 genic_intron novelGene_334 novel NA NA NA NA no_subtype TRUE canonical NA NA 1397 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4769.4 chr7 + 5759 3 novel_not_in_catalog RBM33 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2353 None 3 34 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.1794.1 chr2 - 1741 13 full-splice_match CLK1 ENST00000321356.8 1888 13 76 71 no_subtype TRUE canonical NA NA 60 None 4 1 0 FALSE 0 0 NA C coding 484 1452 61 1512 PB.4769.1 chr7 + 6489 20 novel_not_in_catalog RBM33 novel NA NA NA NA no_subtype TRUE canonical NA NA 3658 None 2 19 0 TRUE 0 0 NA B coding 1180 3540 165 3704 PB.6333.1 chr11 + 1775 3 full-splice_match CLP1 ENST00000533682.1 2435 3 651 9 no_subtype FALSE canonical NA NA 680 None 6 4 0 FALSE 0 0 NA A coding 425 1275 75 1349 PB.10843.6 chr22 - 3089 12 novel_not_in_catalog LMF2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 905 None 2 9 1 TRUE 0 0 NA C coding 672 2016 635 2650 PB.6004.1 chr10 - 3271 18 full-splice_match NT5C2 ENST00000343289.9 3435 18 27 137 no_subtype FALSE canonical NA NA 44 None 7 16 0 FALSE 0 0 NA C coding 561 1683 69 1751 PB.10843.4 chr22 - 2666 13 novel_in_catalog LMF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 122 None 3 4 1 FALSE 0 0 NA C coding 402 1206 29 1234 PB.2592.2 chr3 + 1794 1 genic_intron novelGene_1319 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 14 9 0 FALSE 0 0 NA B coding 117 351 983 1333 PB.8799.1 chr16 + 3696 18 full-splice_match ZC3H18 ENST00000301011.9 3729 18 29 4 no_subtype FALSE canonical NA NA 2834 None 39 11 0 FALSE 0 0 NA C coding 953 2859 172 3030 PB.2388.1 chr3 - 3038 1 full-splice_match MIR568 ENST00000570269.2 15214 1 4370 7806 no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6119.1 chr11 + 1441 7 incomplete-splice_match PNPLA2 ENST00000336615.8 2428 10 629 358 internal_fragment FALSE canonical NA NA 748 None 2 8 0 FALSE 0 0 NA A coding 268 804 282 1085 PB.4859.1 chr8 - 2963 1 incomplete-splice_match ZNF395 ENST00000344423.9 4808 10 1811 35 no_subtype FALSE canonical NA NA NA None 3 31 0 FALSE 0 0 NA B coding 129 387 1071 1457 PB.2592.5 chr3 + 2677 2 genic_intron novelGene_1323 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 732 None 2 13 1 FALSE 0 0 NA A coding 148 444 1016 1459 PB.4859.2 chr8 - 2037 10 novel_in_catalog ZNF395 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 47 None 3 6 0 FALSE 0 0 NA B coding 513 1539 66 1604 PB.10612.4 chr21 + 3322 7 novel_not_in_catalog PRMT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 800 None 10 20 0 FALSE 0 0 NA C coding 278 834 144 977 PB.7796.3 chr14 + 2650 11 incomplete-splice_match PSEN1 ENST00000324501.9 6078 12 137 3291 internal_fragment FALSE canonical NA NA 1383 None 4 4 0 FALSE 0 0 NA B coding 467 1401 136 1536 PB.4999.3 chr8 + 3435 3 genic CA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3208 None 4 24 1 TRUE 0 0 NA C coding 124 372 1233 1604 PB.10612.5 chr21 + 2871 10 novel_in_catalog PRMT2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2259 None 2 20 0 FALSE 0 0 NA C coding 324 972 154 1125 PB.9813.2 chr19 + 1644 10 full-splice_match CCDC130 ENST00000221554.12 1792 10 144 4 no_subtype FALSE canonical NA NA 945 None 20 3 0 FALSE 0 0 NA C coding 396 1188 234 1421 PB.3603.2 chr5 + 4329 2 genic_intron novelGene_1258 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4271 None 2 29 0 FALSE 0 0 NA B coding 134 402 1148 1549 PB.10368.1 chr20 - 1771 1 incomplete-splice_match BLCAP ENST00000397137.5 2036 2 264 2 no_subtype FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3972.1 chr6 - 3909 11 incomplete-splice_match DST ENST00000340834.9 5024 23 -884 1999 internal_fragment FALSE canonical NA NA 2177 None 5 6 0 FALSE 0 0 NA A coding 1008 3024 885 3908 PB.10451.1 chr20 + 2845 1 full-splice_match TSHZ2 ENST00000626626.1 670 1 -859 -1316 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.528.2 chr1 - 3381 10 novel_not_in_catalog SLC25A24 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 310 None 2 10 1 TRUE 0 0 NA C coding 475 1425 128 1552 PB.4581.2 chr7 - 2963 1 genic_intron novelGene_944 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 16 0 FALSE 0 0 NA A coding 67 201 193 393 PB.2689.1 chr3 - 2871 1 genic CEP19 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 30 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5489.1 chr9 - 4021 21 full-splice_match RC3H2 ENST00000357244.6 3991 21 -34 4 no_subtype TRUE canonical NA NA 208 None 4 2 0 FALSE 0 0 NA A coding 1191 3573 276 3848 PB.2291.1 chr3 + 1558 1 full-splice_match PSMC1P1 ENST00000478110.1 1320 1 -20 -218 no_subtype FALSE canonical NA NA NA None 18 1 0 FALSE 0 0 NA C coding 294 882 21 902 PB.661.1 chr1 - 1276 1 incomplete-splice_match GOLPH3L ENST00000271732.7 2999 5 1714 10 no_subtype FALSE canonical NA NA NA None 8 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3703.1 chr5 + 2864 8 full-splice_match BTNL3 ENST00000342868.6 2440 8 64 -488 no_subtype FALSE canonical NA NA 982 None 5 8 0 FALSE 0 0 NA A coding 466 1398 121 1518 PB.6105.1 chr11 - 550 2 full-splice_match IFITM3 ENST00000399808.4 808 2 249 9 no_subtype FALSE canonical NA NA 237 None 8 0 0 FALSE 0 0 NA A coding 112 336 52 387 PB.7049.1 chr12 - 3526 29 novel_not_in_catalog MYO1A novel NA NA NA NA no_subtype FALSE canonical NA NA 223 None 21 2 0 TRUE 0 0 NA A coding 1043 3129 249 3377 PB.1958.1 chr2 + 1918 10 full-splice_match PPP1R7 ENST00000234038.10 2386 10 467 1 no_subtype FALSE canonical NA NA 913 None 2 8 0 FALSE 0 0 NA A coding 360 1080 8 1087 PB.1774.1 chr2 + 2666 2 genic_intron novelGene_1364 novel NA NA NA NA no_subtype FALSE canonical NA NA 2058 None 2 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4124.4 chr6 - 4334 21 novel_not_in_catalog EPB41L2 novel NA NA NA NA no_subtype FALSE canonical NA NA 76 None 2 8 1 TRUE 0 0 NA B coding 848 2544 537 3080 PB.372.1 chr1 - 1605 3 full-splice_match COA7 ENST00000371538.4 4005 3 11 2389 no_subtype FALSE canonical NA NA 135 None 11 4 0 FALSE 0 0 NA A coding 231 693 30 722 PB.2882.2 chr4 - 1658 11 full-splice_match NAAA ENST00000286733.8 1900 11 45 197 no_subtype FALSE canonical NA NA 263 None 70 5 0 FALSE 0 0 NA C coding 359 1077 58 1134 PB.2882.1 chr4 - 1681 9 novel_in_catalog NAAA novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 263 None 2 8 1 FALSE 0 0 NA C coding 303 909 58 966 PB.3636.6 chr5 + 5968 52 novel_not_in_catalog DOCK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 5388 None 16 0 0 TRUE 0 0 NA B coding 1777 5331 118 5448 PB.3636.5 chr5 + 6141 54 novel_not_in_catalog DOCK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 5585 None 7 3 1 TRUE 0 0 NA B coding 1869 5607 39 5645 PB.3636.4 chr5 + 5914 51 novel_not_in_catalog DOCK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 5334 None 2 3 0 TRUE 0 0 NA B coding 956 2868 2527 5394 PB.8064.1 chr15 + 4482 17 novel_not_in_catalog SEMA6D novel NA NA NA NA no_subtype FALSE canonical NA NA 2127 None 2 14 1 FALSE 0 0 NA B coding 749 2247 1167 3413 PB.3500.1 chr5 - 1744 1 full-splice_match HNRNPA0 ENST00000314940.6 8726 1 13 6969 no_subtype FALSE canonical NA NA NA None 23 3 0 FALSE 0 0 NA A coding 305 915 298 1212 PB.3636.1 chr5 + 5967 53 novel_not_in_catalog DOCK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 5446 None 169 0 0 TRUE 0 0 NA B coding 1830 5490 17 5506 PB.8064.2 chr15 + 3258 1 incomplete-splice_match SEMA6D ENST00000389428.7 5874 17 2612 5 no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA B coding 177 531 291 821 PB.10062.1 chr19 - 2949 1 genic FBXO46 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA C coding 603 1809 80 1888 PB.10062.2 chr19 - 2604 2 full-splice_match FBXO46 ENST00000317683.3 3001 2 -14 411 no_subtype FALSE canonical NA NA 70 None 4 6 0 FALSE 0 0 NA C coding 603 1809 149 1957 PB.2654.10 chr3 + 2973 9 novel_in_catalog EIF4A2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 887 None 19 12 0 FALSE 0 0 NA C coding 265 795 174 968 PB.7838.1 chr14 + 3122 2 novel_not_in_catalog SLIRP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3089 None 6 17 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.1848.1 chr2 + 3150 19 novel_not_in_catalog SMARCAL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2841 None 35 8 3 TRUE 0 0 NA B coding 650 1950 1129 3078 PB.6433.2 chr11 + 1525 11 novel_not_in_catalog FRMD8 novel NA NA NA NA no_subtype FALSE canonical NA NA 1380 None 2 1 0 FALSE 0 0 NA C coding 444 1332 105 1436 PB.6433.1 chr11 + 3656 11 full-splice_match FRMD8 ENST00000317568.9 3723 11 59 8 no_subtype FALSE canonical NA NA 1380 None 42 24 0 FALSE 0 0 NA C coding 464 1392 105 1496 PB.8786.5 chr16 + 5586 2 novel_not_in_catalog KIAA0513 novel NA NA NA NA no_subtype TRUE canonical NA NA 951 None 3 47 1 TRUE 0 0 NA B coding 128 384 1903 2286 PB.8786.2 chr16 + 3458 12 novel_not_in_catalog KIAA0513 novel NA NA NA NA no_subtype FALSE canonical NA NA 2774 None 29 15 0 TRUE 0 0 NA B coding 401 1203 175 1377 PB.8786.3 chr16 + 5583 5 novel_not_in_catalog KIAA0513 novel NA NA NA NA no_subtype TRUE canonical NA NA 930 None 2 35 0 TRUE 0 0 NA B coding 197 591 175 765 PB.10744.1 chr22 + 2138 3 full-splice_match CDC42EP1 ENST00000249014.4 2181 3 35 8 no_subtype FALSE canonical NA NA 848 None 3 3 0 FALSE 0 0 NA A coding 379 1137 422 1558 PB.1848.3 chr2 + 3023 18 novel_not_in_catalog SMARCAL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2712 None 2 5 2 TRUE 0 0 NA B coding 650 1950 1000 2949 PB.1906.8 chr2 - 1241 10 incomplete-splice_match SP110 ENST00000258382.9 2080 15 123 716 internal_fragment FALSE canonical NA NA 116 None 3 1 0 FALSE 0 0 NA B coding 374 1122 118 1239 PB.6792.2 chr12 + 3376 1 novel_in_catalog TPI1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA C coding 107 321 37 357 PB.6792.1 chr12 + 1228 7 full-splice_match TPI1 ENST00000396705.9 1231 7 2 1 no_subtype FALSE canonical NA NA 665 None 104 5 0 FALSE 0 0 NA C coding 249 747 35 781 PB.1906.4 chr2 - 1479 1 genic_intron novelGene_1410 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A coding 105 315 338 652 PB.1049.1 chr1 + 3708 18 full-splice_match KCTD3 ENST00000259154.8 3931 18 219 4 no_subtype FALSE canonical NA NA 1961 None 5 6 0 FALSE 0 0 NA A coding 815 2445 76 2520 PB.7232.1 chr12 + 3685 13 full-splice_match USP30 ENST00000257548.9 3742 13 47 10 no_subtype FALSE canonical NA NA 1335 None 12 18 0 FALSE 0 0 NA A coding 517 1551 47 1597 PB.6792.4 chr12 + 3043 3 novel_in_catalog TPI1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2482 None 2 25 0 FALSE 0 0 NA C coding 107 321 24 344 PB.5345.15 chr9 - 1476 1 full-splice_match HNRNPK ENST00000384871.1 110 1 87 -1453 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7724.1 chr14 - 3744 12 novel_not_in_catalog ATG14 novel NA NA NA NA no_subtype FALSE canonical NA NA 229 None 2 26 1 TRUE 0 0 NA A coding 333 999 9 1007 PB.3644.3 chr5 - 3518 13 full-splice_match FBXW11 ENST00000296933.10 4539 13 235 786 no_subtype FALSE canonical NA NA 181 None 2 11 2 FALSE 0 0 NA C coding 529 1587 137 1723 PB.5460.25 chr9 - 5457 23 fusion RP11-9M16.2,AKNA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 25 None 3 13 2 TRUE 0 0 NA B coding 1439 4317 251 4567 PB.5460.24 chr9 - 5516 24 fusion RP11-9M16.2,AKNA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 117 None 3 13 3 TRUE 0 0 NA B coding 1439 4317 310 4626 PB.5460.29 chr9 - 2945 1 novel_in_catalog AKNA novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2179.1 chr3 - 1778 10 novel_not_in_catalog SLC25A20 novel NA NA NA NA no_subtype FALSE canonical NA NA 190 None 23 3 0 TRUE 0 0 NA A coding 301 903 92 994 PB.7419.2 chr13 - 3562 18 full-splice_match HSPH1 ENST00000320027.9 5191 18 47 1582 no_subtype FALSE canonical NA NA 405 None 78 6 0 FALSE 0 0 NA C coding 858 2574 299 2872 PB.7419.3 chr13 - 3496 17 full-splice_match HSPH1 ENST00000380405.7 3480 17 -18 2 no_subtype TRUE canonical NA NA 470 None 5 9 1 FALSE 0 0 NA C coding 814 2442 364 2805 PB.2558.3 chr3 + 3911 18 novel_not_in_catalog SMC4 novel NA NA NA NA no_subtype FALSE canonical NA NA 2927 None 2 11 1 TRUE 0 0 NA B coding 927 2781 12 2792 PB.8212.1 chr15 + 1499 11 novel_not_in_catalog NEIL1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1218 None 4 3 0 TRUE 0 0 NA B coding 390 1170 117 1286 PB.2558.1 chr3 + 3221 7 novel_not_in_catalog SMC4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3128 None 2 31 0 TRUE 0 0 NA B coding 285 855 2365 3219 PB.10057.1 chr19 - 2694 26 novel_not_in_catalog ERCC2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 26 None 11 10 3 TRUE 0 0 NA A coding 760 2280 22 2301 PB.8405.8 chr16 - 6017 4 novel_not_in_catalog CREBBP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 745 None 2 33 1 TRUE 0 0 NA B coding 112 336 659 994 PB.970.1 chr1 - 3322 13 novel_not_in_catalog KLHL12 novel NA NA NA NA no_subtype FALSE canonical NA NA 168 None 55 11 0 TRUE 0 0 NA A coding 568 1704 214 1917 PB.8405.5 chr16 - 3576 4 incomplete-splice_match CREBBP ENST00000382070.7 7598 30 4736 -714 5prime_fragment FALSE canonical NA NA 82 None 3 11 0 FALSE 0 0 NA B coding 833 2499 182 2680 PB.1457.1 chr2 - 2631 15 novel_not_in_catalog IMMT novel NA NA NA NA no_subtype FALSE non_canonical NA NA 113 None 66 5 1 TRUE 0 0 NA B coding 745 2235 69 2303 PB.8405.3 chr16 - 6639 25 incomplete-splice_match CREBBP ENST00000382070.7 7598 30 1677 -718 5prime_fragment FALSE canonical NA NA 89 None 2 12 0 FALSE 0 0 NA B coding 1881 5643 97 5739 PB.2562.1 chr3 - 2736 1 genic_intron novelGene_1280 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8405.1 chr16 - 5797 8 novel_not_in_catalog CREBBP novel NA NA NA NA no_subtype TRUE canonical NA NA 111 None 2 26 1 TRUE 0 0 NA B coding 1031 3093 65 3157 PB.2205.10 chr3 + 6036 23 novel_in_catalog RBM5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5411 None 3 16 0 FALSE 0 0 NA C coding 643 1929 3606 5534 PB.2205.12 chr3 + 3215 1 novel_in_catalog RBM5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 21 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.322.1 chr1 + 3410 22 full-splice_match KDM4A ENST00000372396.3 4474 22 15 1049 no_subtype FALSE canonical NA NA 3173 None 20 1 0 FALSE 0 0 NA C coding 1064 3192 120 3311 PB.2617.1 chr3 + 2782 2 antisense novelGene_KLHL6_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1591 None 2 11 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.322.2 chr1 + 3412 22 novel_not_in_catalog KDM4A novel NA NA NA NA no_subtype FALSE canonical NA NA 3171 None 2 3 0 FALSE 0 0 NA C coding 1064 3192 118 3309 PB.1183.6 chr2 - 2910 20 novel_not_in_catalog ADAM17 novel NA NA NA NA no_subtype FALSE canonical NA NA 247 None 2 6 0 TRUE 0 0 NA B coding 824 2472 151 2622 PB.4737.1 chr7 + 1847 4 novel_not_in_catalog LRRC61 novel NA NA NA NA no_subtype FALSE canonical NA NA 1384 None 4 6 0 TRUE 0 0 NA A coding 259 777 574 1350 PB.1183.4 chr2 - 3447 23 novel_not_in_catalog ADAM17 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 235 None 11 13 3 TRUE 0 0 NA B coding 824 2472 139 2610 PB.1183.5 chr2 - 3453 23 novel_not_in_catalog ADAM17 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 233 None 5 16 2 TRUE 0 0 NA B coding 824 2472 137 2608 PB.1183.2 chr2 - 3500 23 novel_not_in_catalog ADAM17 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 280 None 8 13 2 TRUE 0 0 NA B coding 824 2472 184 2655 PB.9414.5 chr17 - 3213 6 novel_not_in_catalog CANT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 47 None 24 16 2 TRUE 0 0 NA B coding 401 1203 180 1382 PB.1183.1 chr2 - 3585 26 novel_not_in_catalog ADAM17 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 322 None 3 16 2 TRUE 0 0 NA B coding 824 2472 226 2697 PB.1373.4 chr2 - 3480 7 novel_not_in_catalog PELI1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 340 None 5 11 1 FALSE 0 0 NA C coding 418 1254 391 1644 PB.4879.1 chr8 + 3229 19 novel_not_in_catalog DDHD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2356 None 6 3 0 TRUE 0 0 NA A coding 711 2133 195 2327 PB.9118.1 chr17 + 2903 1 antisense novelGene_KRTAP16-1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 1 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6893.1 chr12 - 2974 6 full-splice_match FAM60A ENST00000337682.8 3163 6 175 14 no_subtype FALSE canonical NA NA 174 None 23 13 0 FALSE 0 0 NA C coding 221 663 195 857 PB.1373.3 chr2 - 2457 8 novel_not_in_catalog PELI1 novel NA NA NA NA no_subtype FALSE canonical NA NA 340 None 55 6 0 FALSE 0 0 NA C coding 418 1254 520 1773 PB.6893.2 chr12 - 3070 7 novel_not_in_catalog FAM60A novel NA NA NA NA no_subtype FALSE canonical NA NA 127 None 4 12 0 FALSE 0 0 NA C coding 221 663 286 948 PB.6391.1 chr11 - 2935 3 full-splice_match CHRM1 ENST00000543973.1 2123 3 241 -1053 no_subtype FALSE canonical NA NA 349 None 2 14 0 FALSE 0 0 NA A coding 460 1380 520 1899 PB.9821.1 chr19 - 1583 4 full-splice_match ASF1B ENST00000263382.7 2059 4 429 47 no_subtype FALSE canonical NA NA 180 None 2 9 0 FALSE 0 0 NA C coding 202 606 72 677 PB.10088.5 chr19 - 3071 30 novel_not_in_catalog LIG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 38 None 4 6 2 TRUE 0 0 NA B coding 919 2757 118 2874 PB.5112.5 chr8 - 1655 1 genic_intron novelGene_1088 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 22 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10088.6 chr19 - 3156 31 novel_not_in_catalog LIG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 94 None 2 14 3 TRUE 0 0 NA B coding 919 2757 206 2962 PB.678.2 chr1 - 3537 11 full-splice_match PI4KB ENST00000368874.8 3934 11 58 339 no_subtype FALSE canonical NA NA 387 None 42 6 0 FALSE 0 0 NA C coding 801 2403 416 2818 PB.7555.1 chr13 + 2704 17 full-splice_match TM9SF2 ENST00000376387.4 3430 17 102 624 no_subtype FALSE canonical NA NA 2012 None 450 0 0 FALSE 0 0 NA C coding 663 1989 89 2077 PB.10088.3 chr19 - 3064 29 novel_not_in_catalog LIG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 51 None 25 3 1 TRUE 0 0 NA B coding 919 2757 111 2867 PB.10088.2 chr19 - 3103 30 novel_not_in_catalog LIG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 38 None 6 8 3 TRUE 0 0 NA B coding 919 2757 142 2898 PB.4163.3 chr6 + 2975 4 novel_in_catalog VTA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 355 None 7 17 0 FALSE 0 0 NA C coding 146 438 21 458 PB.6940.1 chr12 - 3360 7 incomplete-splice_match ADCY6 ENST00000357869.7 5748 20 2386 2 5prime_fragment FALSE canonical NA NA 83 None 2 11 0 FALSE 0 0 NA A coding 272 816 151 966 PB.4163.1 chr6 + 1887 8 full-splice_match VTA1 ENST00000367630.8 7028 8 59 5082 no_subtype FALSE canonical NA NA 777 None 15 3 0 FALSE 0 0 NA C coding 265 795 126 920 PB.1260.3 chr2 + 2962 17 full-splice_match SPAST ENST00000621856.1 1715 17 27 -1274 no_subtype FALSE canonical NA NA 1565 None 3 11 0 FALSE 0 0 NA A coding 530 1590 96 1685 PB.9019.2 chr17 - 2588 2 antisense novelGene_TAOK1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1824 None 26 12 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.7153.1 chr12 + 1792 3 genic_intron novelGene_844 novel NA NA NA NA no_subtype TRUE canonical NA NA 586 None 4 21 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.9019.1 chr17 - 2923 7 novel_not_in_catalog ABHD15 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 208 None 2 8 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.736.6 chr1 - 4251 22 novel_in_catalog ARHGEF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 270 None 3 16 0 FALSE 0 0 NA C coding 958 2874 289 3162 PB.736.7 chr1 - 4226 22 novel_in_catalog ARHGEF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 213 None 16 9 1 FALSE 0 0 NA C coding 996 2988 151 3138 PB.736.5 chr1 - 4094 22 novel_in_catalog ARHGEF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 110 None 3 9 1 FALSE 0 0 NA C coding 959 2877 129 3005 PB.9841.1 chr19 + 1698 13 full-splice_match CYP4F12 ENST00000550308.5 2044 13 313 33 no_subtype TRUE canonical NA NA 1464 None 11 1 0 FALSE 0 0 NA C coding 524 1572 68 1639 PB.7657.1 chr14 - 1870 14 full-splice_match SNX6 ENST00000362031.8 2001 14 53 78 no_subtype FALSE canonical NA NA 20 None 140 2 0 FALSE 0 0 NA C coding 406 1218 15 1232 PB.7657.2 chr14 - 2713 12 novel_in_catalog SNX6 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 27 None 3 5 0 FALSE 0 0 NA C coding 324 972 22 993 PB.9841.2 chr19 + 1691 12 full-splice_match CYP4F12 ENST00000324632.10 1687 12 -2 -2 no_subtype FALSE canonical NA NA 1451 None 3 1 0 FALSE 0 0 NA C coding 524 1572 55 1626 PB.7752.4 chr14 + 3018 23 novel_not_in_catalog SYNE2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2932 None 2 1 0 FALSE 0 0 NA B coding 955 2865 152 3016 PB.7752.5 chr14 + 2904 22 incomplete-splice_match SYNE2 ENST00000554584.5 20508 115 14 17590 internal_fragment FALSE canonical NA NA 2818 None 6 1 0 FALSE 0 0 NA B coding 955 2865 38 2902 PB.4022.1 chr6 - 2131 12 full-splice_match SYNCRIP ENST00000355238.10 6449 12 66 4252 no_subtype FALSE canonical NA NA 129 None 33 1 0 FALSE 0 0 NA C coding 562 1686 142 1827 PB.10645.2 chr22 - 2518 7 novel_not_in_catalog KLHL22 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 24 None 3 5 1 FALSE 0 0 NA B coding 634 1902 65 1966 PB.10645.3 chr22 - 2754 8 novel_not_in_catalog KLHL22 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 26 None 2 6 0 FALSE 0 0 NA B coding 472 1416 67 1482 PB.7752.2 chr14 + 3016 23 novel_not_in_catalog SYNE2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2929 None 2 1 0 FALSE 0 0 NA B coding 956 2868 149 3016 PB.10313.1 chr20 + 3127 17 novel_not_in_catalog TPX2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2302 None 2 11 0 FALSE 0 0 NA B coding 747 2241 170 2410 PB.437.1 chr1 + 2073 12 full-splice_match ACADM ENST00000370841.8 2619 12 362 184 no_subtype FALSE canonical NA NA 1269 None 7 8 0 FALSE 0 0 NA A coding 421 1263 76 1338 PB.2211.1 chr3 - 1752 4 full-splice_match HYAL3 ENST00000621157.5 1696 4 -58 2 no_subtype FALSE canonical NA NA 69 None 10 12 0 FALSE 0 0 NA C coding 417 1251 87 1337 PB.2211.2 chr3 - 1615 3 full-splice_match HYAL3 ENST00000359051.7 1635 3 17 3 no_subtype FALSE canonical NA NA 22 None 2 10 1 FALSE 0 0 NA C coding 387 1161 40 1200 PB.5194.1 chr9 + 1574 5 incomplete-splice_match KANK1 ENST00000382289.6 1926 8 351 1 internal_fragment FALSE canonical NA NA 645 None 2 11 0 FALSE 0 0 NA A coding 218 654 52 705 PB.6026.4 chr10 + 3095 20 novel_in_catalog ACSL5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1943 None 5 7 0 FALSE 0 0 NA C coding 683 2049 33 2081 PB.8050.1 chr15 - 1759 1 antisense novelGene_WDR76_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3089.1 chr4 - 3248 1 novel_in_catalog FBXW7 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1920.3 chr2 + 3331 9 novel_not_in_catalog EIF4E2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3099 None 11 11 2 TRUE 0 0 NA C coding 234 702 25 726 PB.346.1 chr1 - 2922 10 full-splice_match LRRC41 ENST00000343304.10 2947 10 18 7 no_subtype FALSE canonical NA NA 225 None 202 0 0 FALSE 0 0 NA A coding 790 2370 93 2462 PB.6036.1 chr10 - 2572 14 incomplete-splice_match CCDC186 ENST00000369287.7 7245 16 65 4608 internal_fragment TRUE canonical NA NA 141 None 6 1 0 FALSE 0 0 NA A coding 790 2370 203 2572 PB.5057.2 chr8 - 2665 8 novel_not_in_catalog SLC25A32 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 424 None 3 11 1 TRUE 0 0 NA B coding 315 945 271 1215 PB.2223.2 chr3 - 1493 3 antisense novelGene_RAD54L2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1405 None 2 10 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.9025.1 chr17 + 1624 1 full-splice_match RP11-1148O4.1 ENST00000583091.1 1000 1 -28 -596 no_subtype FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA A coding 138 414 191 604 PB.8391.1 chr16 + 3211 12 novel_not_in_catalog FLYWCH1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2891 None 12 13 1 TRUE 0 0 NA A coding 716 2148 347 2494 PB.5027.1 chr8 - 1526 8 novel_not_in_catalog MTERF3 novel NA NA NA NA no_subtype FALSE canonical NA NA 197 None 22 1 0 FALSE 0 0 NA A coding 417 1251 208 1458 PB.4469.1 chr7 + 1305 9 full-splice_match MDH2 ENST00000315758.9 2209 9 -16 920 no_subtype FALSE canonical NA NA 995 None 36 3 0 FALSE 0 0 NA A coding 338 1014 111 1124 PB.3618.8 chr5 - 1714 3 novel_not_in_catalog ADAM19 novel NA NA NA NA no_subtype FALSE canonical NA NA 173 None 2 10 0 TRUE 0 0 NA B coding 120 360 80 439 PB.10432.21 chr20 - 5820 43 novel_not_in_catalog PREX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 241 None 3 11 0 TRUE 0 0 NA B coding 1484 4452 548 4999 PB.10799.1 chr22 + 3675 11 novel_not_in_catalog CCDC134 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3487 None 2 17 3 TRUE 0 0 NA A coding 229 687 236 922 PB.10799.2 chr22 + 4192 19 full-splice_match SREBF2 ENST00000361204.8 5240 19 107 941 no_subtype FALSE canonical NA NA 3264 None 35 11 0 FALSE 0 0 NA C coding 1141 3423 60 3482 PB.10432.22 chr20 - 3269 6 novel_not_in_catalog PREX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1066 None 4 13 1 TRUE 0 0 NA B coding 131 393 2678 3070 PB.10799.4 chr22 + 2789 2 novel_in_catalog SREBF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 925 None 5 15 0 FALSE 0 0 NA C coding 119 357 787 1143 PB.4865.1 chr8 - 1658 14 novel_not_in_catalog KIF13B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 91 None 7 1 0 FALSE 0 0 NA B coding 540 1620 37 1656 PB.10432.27 chr20 - 2995 2 genic_intron novelGene_485 novel NA NA NA NA no_subtype TRUE canonical NA NA 1951 None 3 16 1 FALSE 0 0 NA A coding 121 363 2619 2981 PB.10432.26 chr20 - 2491 1 genic_intron novelGene_484 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 17 0 FALSE 0 0 NA B coding 231 693 1457 2149 PB.4660.1 chr7 - 3436 15 full-splice_match TMEM209 ENST00000397622.6 3545 15 101 8 no_subtype FALSE canonical NA NA 25 None 6 18 0 FALSE 0 0 NA A coding 561 1683 23 1705 PB.5482.1 chr9 - 1688 1 incomplete-splice_match STOM ENST00000286713.6 3010 7 1321 2 no_subtype FALSE canonical NA NA NA None 6 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3538.1 chr5 + 2457 13 full-splice_match HARS2 ENST00000230771.7 2483 13 37 -11 no_subtype FALSE canonical NA NA 1647 None 9 6 0 FALSE 0 0 NA C coding 506 1518 187 1704 PB.5176.3 chr8 - 4455 38 full-splice_match CPSF1 ENST00000616140.1 4494 38 16 23 no_subtype FALSE canonical NA NA 45 None 4 6 0 FALSE 0 0 NA C coding 1443 4329 60 4388 PB.5176.1 chr8 - 5312 37 novel_in_catalog CPSF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 79 None 3 16 0 FALSE 0 0 NA C coding 1011 3033 94 3126 PB.1248.2 chr2 + 2724 8 full-splice_match PPP1CB ENST00000395366.2 4893 8 263 1906 no_subtype FALSE canonical NA NA 888 None 122 11 0 FALSE 0 0 NA C coding 327 981 10 990 PB.1248.3 chr2 + 2500 1 incomplete-splice_match PPP1CB ENST00000395366.2 4893 8 2391 3 no_subtype FALSE canonical NA NA NA None 360 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3229.1 chr5 + 1445 7 novel_not_in_catalog FBXO4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1068 None 3 1 0 FALSE 0 0 NA C coding 361 1083 73 1155 PB.1248.1 chr2 + 2843 9 full-splice_match PPP1CB ENST00000358506.6 4771 9 27 1901 no_subtype FALSE canonical NA NA 1012 None 15 12 0 FALSE 0 0 NA C coding 327 981 134 1114 PB.6449.1 chr11 - 1212 10 full-splice_match FIBP ENST00000357519.8 1248 10 32 4 no_subtype FALSE canonical NA NA 174 None 9 0 0 FALSE 0 0 NA A coding 357 1071 90 1160 PB.1130.2 chr1 + 2909 13 novel_not_in_catalog TBCE novel NA NA NA NA no_subtype FALSE canonical NA NA 1968 None 2 13 0 TRUE 0 0 NA B coding 178 534 1542 2075 PB.1038.1 chr1 - 4104 21 novel_not_in_catalog INTS7 novel NA NA NA NA no_subtype FALSE canonical NA NA 199 None 8 14 0 TRUE 0 0 NA C coding 962 2886 106 2991 PB.1212.1 chr2 + 5903 2 genic_intron novelGene_222 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 908 None 3 23 1 FALSE 0 0 NA A coding 105 315 4682 4996 PB.2814.3 chr4 + 1657 3 full-splice_match RHOH ENST00000381799.9 4305 3 338 2310 no_subtype FALSE canonical NA NA 177 None 26 1 0 FALSE 0 0 NA C coding 191 573 387 959 PB.2318.1 chr3 - 2779 2 genic_intron novelGene_794 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 181 None 2 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11106.1 chrX + 5515 7 full-splice_match TMEM164 ENST00000372068.6 5566 7 53 -2 no_subtype FALSE canonical NA NA 973 None 2 19 0 FALSE 0 0 NA C coding 297 891 287 1177 PB.7789.1 chr14 + 2817 1 antisense novelGene_SYNJ2BP_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6472.10 chr11 + 3306 9 novel_in_catalog KDM2A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1830 None 2 2 0 FALSE 0 0 NA C coding 620 1860 150 2009 PB.8524.2 chr16 - 1752 11 incomplete-splice_match EIF3CL ENST00000398944.7 3053 21 1163 138 5prime_fragment FALSE canonical NA NA 111 None 2 0 0 FALSE 0 0 NA A coding 521 1563 106 1668 PB.286.1 chr1 - 4070 5 full-splice_match HEYL ENST00000372852.3 3661 5 306 -715 no_subtype FALSE canonical NA NA 94 None 2 14 0 FALSE 0 0 NA A coding 328 984 15 998 PB.2814.1 chr4 + 2757 5 novel_not_in_catalog RHOH novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2528 None 9 4 0 TRUE 0 0 NA C coding 191 573 603 1175 PB.8182.2 chr15 - 1108 7 full-splice_match ANP32A ENST00000465139.6 2440 7 -9 1341 no_subtype FALSE canonical NA NA 207 None 3 1 0 FALSE 0 0 NA C coding 249 747 154 900 PB.2551.2 chr3 - 3814 12 novel_in_catalog CCNL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 356 None 2 6 0 FALSE 0 0 NA C coding 299 897 2432 3328 PB.427.1 chr1 - 2819 15 full-splice_match LRRC40 ENST00000370952.3 2884 15 54 11 no_subtype FALSE canonical NA NA 177 None 22 4 0 FALSE 0 0 NA A coding 602 1806 27 1832 PB.10227.1 chr20 - 1488 9 novel_not_in_catalog NSFL1C novel NA NA NA NA no_subtype FALSE canonical NA NA 237 None 51 7 1 FALSE 0 0 NA B coding 292 876 371 1246 PB.7812.1 chr14 - 817 5 full-splice_match NPC2 ENST00000555619.5 1035 5 206 12 no_subtype FALSE canonical NA NA 114 None 4 5 0 FALSE 0 0 NA A coding 151 453 33 485 PB.4461.2 chr7 + 5632 28 novel_not_in_catalog GTF2I novel NA NA NA NA no_subtype FALSE canonical NA NA 3632 None 4 28 0 TRUE 0 0 NA B coding 344 1032 63 1094 PB.8861.4 chr17 - 3406 17 novel_not_in_catalog PELP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 260 None 2 7 1 FALSE 0 0 NA C coding 1116 3348 12 3359 PB.3512.5 chr5 + 2501 3 novel_not_in_catalog MATR3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1811 None 4 29 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.8861.1 chr17 - 3614 16 novel_in_catalog PELP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 256 None 2 11 0 FALSE 0 0 NA C coding 594 1782 1778 3559 PB.8861.2 chr17 - 3457 17 full-splice_match PELP1 ENST00000574876.5 3465 17 -8 16 no_subtype FALSE canonical NA NA 275 None 61 4 0 FALSE 0 0 NA C coding 1130 3390 27 3416 PB.8861.3 chr17 - 3076 17 novel_in_catalog PELP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 34 None 3 7 0 FALSE 0 0 NA C coding 935 2805 227 3031 PB.9876.4 chr19 + 5917 27 novel_not_in_catalog MAST3 novel NA NA NA NA no_subtype FALSE canonical NA NA 3425 None 3 12 1 FALSE 0 0 NA B coding 1147 3441 518 3958 PB.9876.3 chr19 + 5936 28 novel_not_in_catalog MAST3 novel NA NA NA NA no_subtype FALSE canonical NA NA 3450 None 5 12 0 FALSE 0 0 NA B coding 1324 3972 12 3983 PB.6756.1 chr12 - 2773 1 novel_in_catalog RP11-359B12.2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9876.1 chr19 + 5964 29 novel_not_in_catalog MAST3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3472 None 2 21 3 TRUE 0 0 NA B coding 1234 3702 304 4005 PB.10106.1 chr19 + 543 5 full-splice_match RPS11 ENST00000270625.6 614 5 69 2 no_subtype FALSE canonical NA NA 367 None 3 5 1 FALSE 0 0 NA A coding 158 474 15 488 PB.1457.7 chr2 - 2643 15 novel_not_in_catalog IMMT novel NA NA NA NA no_subtype FALSE canonical NA NA 95 None 3 4 0 FALSE 0 0 NA B coding 389 1167 51 1217 PB.4481.1 chr7 + 2969 7 incomplete-splice_match PHTF2 ENST00000248550.7 4778 19 1803 6 internal_fragment FALSE canonical NA NA 610 None 2 9 0 FALSE 0 0 NA B coding 171 513 116 628 PB.9892.1 chr19 + 1783 13 full-splice_match DDX49 ENST00000247003.8 1830 13 43 4 no_subtype TRUE canonical NA NA 1287 None 7 4 0 FALSE 0 0 NA A coding 483 1449 25 1473 PB.2640.1 chr3 - 2583 4 novel_in_catalog TMEM41A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 135 None 2 11 0 FALSE 0 0 NA C coding 210 630 17 646 PB.678.9 chr1 - 3572 11 full-splice_match RFX5 ENST00000368870.6 2459 11 72 -1185 no_subtype FALSE canonical NA NA 44 None 28 18 1 FALSE 0 0 NA C coding 616 1848 180 2027 PB.5037.1 chr8 - 2663 12 novel_not_in_catalog STK3 novel NA NA NA NA no_subtype FALSE canonical NA NA 193 None 33 4 0 TRUE 0 0 NA A coding 491 1473 168 1640 PB.4034.4 chr6 - 1445 1 genic_intron novelGene_824 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5820.4 chr10 - 2930 8 novel_not_in_catalog SAR1A novel NA NA NA NA no_subtype FALSE canonical NA NA 23 None 3 14 1 TRUE 0 0 NA C coding 198 594 71 664 PB.7112.2 chr12 + 2568 15 novel_in_catalog CCT2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2297 None 5 11 0 FALSE 0 0 NA C coding 474 1422 904 2325 PB.9780.6 chr19 + 2926 18 novel_not_in_catalog PRKCSH novel NA NA NA NA no_subtype TRUE canonical NA NA 2070 None 3 16 1 TRUE 0 0 NA B coding 535 1605 78 1682 PB.9780.5 chr19 + 2057 19 novel_not_in_catalog PRKCSH novel NA NA NA NA no_subtype FALSE canonical NA NA 1742 None 2 8 1 TRUE 0 0 NA B coding 535 1605 119 1723 PB.9780.4 chr19 + 3008 18 novel_not_in_catalog PRKCSH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1947 None 2 23 1 TRUE 0 0 NA B coding 534 1602 153 1754 PB.9780.3 chr19 + 2096 19 novel_not_in_catalog PRKCSH novel NA NA NA NA no_subtype TRUE canonical NA NA 1777 None 12 8 1 TRUE 0 0 NA B coding 535 1605 154 1758 PB.9780.2 chr19 + 2079 19 novel_not_in_catalog PRKCSH novel NA NA NA NA no_subtype FALSE canonical NA NA 1761 None 3 5 0 TRUE 0 0 NA B coding 528 1584 159 1742 PB.9780.1 chr19 + 2975 19 novel_not_in_catalog PRKCSH novel NA NA NA NA no_subtype TRUE canonical NA NA 2136 None 7 23 2 TRUE 0 0 NA B coding 528 1584 150 1733 PB.1451.1 chr2 - 1922 1 incomplete-splice_match C2orf68 ENST00000306336.5 2837 4 765 151 no_subtype FALSE canonical NA NA NA None 5 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7182.5 chr12 + 2858 8 novel_not_in_catalog SLC25A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2521 None 2 16 2 TRUE 0 0 NA C coding 318 954 1726 2679 PB.10210.1 chr19 + 3624 10 novel_in_catalog TRIM28 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3254 None 2 17 0 FALSE 0 0 NA A coding 358 1074 929 2002 PB.2526.1 chr3 - 1410 5 full-splice_match COMMD2 ENST00000473414.5 3706 5 10 2286 no_subtype FALSE canonical NA NA 112 None 27 4 0 FALSE 0 0 NA C coding 199 597 46 642 PB.7182.6 chr12 + 1516 7 full-splice_match SLC25A3 ENST00000188376.9 1909 7 99 294 no_subtype FALSE canonical NA NA 1180 None 8 1 0 FALSE 0 0 NA C coding 361 1083 256 1338 PB.7182.1 chr12 + 1294 8 novel_not_in_catalog SLC25A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 957 None 2 0 0 FALSE 0 0 NA C coding 361 1083 33 1115 PB.2925.1 chr4 - 1697 9 full-splice_match FAM175A ENST00000321945.11 4291 9 27 2567 no_subtype FALSE canonical NA NA 169 None 7 2 0 FALSE 0 0 NA A coding 409 1227 83 1309 PB.7182.3 chr12 + 1344 9 novel_not_in_catalog SLC25A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1005 None 33 1 1 TRUE 0 0 NA C coding 361 1083 81 1163 PB.7182.2 chr12 + 1323 8 full-splice_match SLC25A3 ENST00000552981.5 1351 8 26 2 no_subtype FALSE canonical NA NA 984 None 20 0 0 FALSE 0 0 NA C coding 361 1083 60 1142 PB.1937.3 chr2 + 2053 1 novel_in_catalog COPS8 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9007.1 chr17 + 1835 10 full-splice_match ERAL1 ENST00000254928.9 1925 10 80 10 no_subtype FALSE canonical NA NA 1208 None 40 2 0 FALSE 0 0 NA A coding 346 1038 291 1328 PB.7608.48 chr14 + 1381 7 fusion TRAV38-2DV8,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 835 None 2 3 1 TRUE 0 0 NA B coding 158 474 358 831 PB.3455.6 chr5 + 2983 7 novel_not_in_catalog CDC42SE2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1619 None 3 22 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.8869.1 chr17 - 829 3 full-splice_match PFN1 ENST00000225655.5 1291 3 454 8 no_subtype FALSE canonical NA NA 298 None 91 5 0 FALSE 0 0 NA A coding 140 420 167 586 PB.3255.1 chr5 + 881 5 full-splice_match GZMA ENST00000274306.6 894 5 11 2 no_subtype FALSE canonical NA NA 651 None 2 0 0 FALSE 0 0 NA A coding 262 786 25 810 PB.10770.2 chr22 - 5623 4 novel_not_in_catalog CBX7 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1235 None 2 62 0 TRUE 0 0 NA B coding 207 621 1898 2518 PB.10770.1 chr22 - 2704 1 incomplete-splice_match CBX7 ENST00000216133.9 4081 6 1361 17 no_subtype FALSE canonical NA NA NA None 3 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2526.2 chr3 - 2653 2 novel_not_in_catalog COMMD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1324 None 3 17 1 TRUE 0 0 NA C coding 109 327 40 366 PB.6457.2 chr11 + 2924 16 full-splice_match KLC2 ENST00000316924.9 2990 16 62 4 no_subtype FALSE canonical NA NA 1940 None 2 8 0 FALSE 0 0 NA A coding 622 1866 156 2021 PB.11035.1 chrX + 2640 1 genic_intron novelGene_698 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10047.1 chr19 + 2666 9 full-splice_match NECTIN2 ENST00000252483.9 2466 9 -206 6 no_subtype FALSE canonical NA NA 1553 None 36 7 0 FALSE 0 0 NA C coding 538 1614 207 1820 PB.10393.2 chr20 + 3601 3 novel_not_in_catalog OSER1-AS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1230 None 2 26 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.10393.1 chr20 + 3753 4 novel_not_in_catalog OSER1-AS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1381 None 4 22 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.7599.1 chr14 + 1530 14 full-splice_match METTL17 ENST00000339374.10 1749 14 207 12 no_subtype FALSE canonical NA NA 1291 None 2 4 0 FALSE 0 0 NA A coding 456 1368 27 1394 PB.4258.1 chr6 - 2973 6 novel_not_in_catalog PSMB1 novel NA NA NA NA no_subtype TRUE canonical NA NA 150 None 2 21 1 FALSE 0 0 NA C coding 145 435 38 472 PB.5708.4 chr10 + 1446 1 genic_intron novelGene_215 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10122.1 chr19 + 1626 2 incomplete-splice_match ATF5 ENST00000423777.6 2069 3 438 5 internal_fragment FALSE canonical NA NA 117 None 3 8 0 FALSE 0 0 NA A coding 216 648 138 785 PB.4781.1 chr8 - 3317 9 full-splice_match ANGPT2 ENST00000629816.2 2602 9 7 -722 no_subtype FALSE canonical NA NA 592 None 5 7 0 FALSE 0 0 NA A coding 495 1485 305 1789 PB.9489.1 chr18 + 2960 2 antisense novelGene_RP11-78A19.3_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1112 None 5 16 1 FALSE 0 0 NA A coding 199 597 102 698 PB.3120.8 chr4 - 3278 22 novel_not_in_catalog DDX60 novel NA NA NA NA no_subtype FALSE canonical NA NA 102 None 4 3 1 TRUE 0 0 NA B coding 804 2412 253 2664 PB.2239.1 chr3 + 5564 48 incomplete-splice_match STAB1 ENST00000321725.10 7928 69 2361 3 internal_fragment TRUE canonical NA NA 5371 None 4 1 0 FALSE 0 0 NA A coding 1752 5256 170 5425 PB.5428.1 chr9 + 2616 2 antisense novelGene_TMEM245_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 795 None 3 11 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3120.4 chr4 - 5988 39 novel_not_in_catalog DDX60 novel NA NA NA NA no_subtype FALSE canonical NA NA 131 None 66 4 1 TRUE 0 0 NA B coding 1712 5136 238 5373 PB.3120.7 chr4 - 5555 36 novel_not_in_catalog DDX60 novel NA NA NA NA no_subtype FALSE canonical NA NA 68 None 2 3 1 TRUE 0 0 NA B coding 1520 4560 381 4940 PB.514.1 chr1 + 3214 11 full-splice_match TRMT13 ENST00000370141.6 3129 11 -92 7 no_subtype FALSE canonical NA NA 1348 None 2 17 0 FALSE 0 0 NA A coding 450 1350 192 1541 PB.6466.1 chr11 - 1902 15 novel_not_in_catalog CTSF novel NA NA NA NA no_subtype TRUE canonical NA NA 271 None 2 5 0 TRUE 0 0 NA A coding 460 1380 59 1438 PB.11208.1 chrX - 2078 8 full-splice_match DNASE1L1 ENST00000369807.5 2110 8 22 10 no_subtype FALSE canonical NA NA 143 None 2 13 0 FALSE 0 0 NA A coding 302 906 231 1136 PB.401.2 chr1 + 1680 1 genic_intron novelGene_581 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.401.1 chr1 + 3078 10 full-splice_match NFIA ENST00000371187.7 2683 10 3 -398 no_subtype FALSE canonical NA NA 1588 None 12 10 0 FALSE 0 0 NA A coding 498 1494 169 1662 PB.4877.1 chr8 + 2523 16 full-splice_match ASH2L ENST00000343823.10 3090 16 296 271 no_subtype FALSE canonical NA NA 1792 None 20 5 0 FALSE 0 0 NA A coding 628 1884 14 1897 PB.8157.2 chr15 - 3106 20 full-splice_match DPP8 ENST00000300141.10 3139 20 11 22 no_subtype FALSE canonical NA NA 203 None 28 2 1 FALSE 0 0 NA C coding 882 2646 215 2860 PB.2603.1 chr3 - 3356 1 full-splice_match LRRFIP1P1 ENST00000498774.1 2246 1 -153 -957 no_subtype FALSE canonical NA NA NA None 5 12 0 FALSE 0 0 NA C coding 197 591 1164 1754 PB.9573.7 chr18 - 5702 5 novel_not_in_catalog TCF4 novel NA NA NA NA no_subtype FALSE canonical NA NA 145 None 5 20 1 TRUE 0 0 NA C coding 146 438 104 541 PB.8893.1 chr17 - 1298 4 full-splice_match CLDN7 ENST00000360325.11 1542 4 0 244 no_subtype FALSE canonical NA NA 658 None 32 5 0 FALSE 0 0 NA A coding 211 633 436 1068 PB.11086.3 chrX + 1967 5 full-splice_match ARMCX3 ENST00000471229.6 2051 5 69 15 no_subtype FALSE canonical NA NA 331 None 18 2 0 FALSE 0 0 NA C coding 342 1026 589 1614 PB.11086.4 chrX + 3328 6 novel_not_in_catalog ARMCX3 novel NA NA NA NA no_subtype FALSE canonical NA NA 3117 None 4 13 1 TRUE 0 0 NA C coding 342 1026 589 1614 PB.2652.1 chr3 + 1651 10 full-splice_match DNAJB11 ENST00000265028.7 1688 10 29 8 no_subtype FALSE canonical NA NA 1203 None 28 7 0 FALSE 0 0 NA A coding 358 1074 192 1265 PB.99.1 chr1 - 1295 9 full-splice_match CAPZB ENST00000264202.7 858 9 -12 -425 no_subtype FALSE canonical NA NA 54 None 2 1 0 FALSE 0 0 NA C coding 272 816 52 867 PB.4575.1 chr7 + 2200 15 full-splice_match LRWD1 ENST00000292616.9 2215 15 8 7 no_subtype TRUE canonical NA NA 1947 None 2 6 0 FALSE 0 0 NA A coding 647 1941 145 2085 PB.8238.1 chr15 + 6288 22 full-splice_match IREB2 ENST00000258886.12 6354 22 59 7 no_subtype FALSE canonical NA NA 2871 None 12 20 0 FALSE 0 0 NA A coding 963 2889 91 2979 PB.5452.1 chr9 - 2762 3 novel_not_in_catalog CDC26 novel NA NA NA NA no_subtype FALSE canonical NA NA 2244 None 2 16 0 FALSE 0 0 NA A coding 107 321 2192 2512 PB.6640.1 chr11 - 3622 15 full-splice_match PPP2R1B ENST00000527614.5 5587 15 56 1909 no_subtype FALSE canonical NA NA 124 None 4 12 0 FALSE 0 0 NA A coding 601 1803 11 1813 PB.7198.1 chr12 + 6334 55 incomplete-splice_match STAB2 ENST00000388887.6 8251 69 1910 7 internal_fragment FALSE canonical NA NA 5899 None 5 4 0 FALSE 0 0 NA A coding 1941 5823 125 5947 PB.5011.1 chr8 - 3831 3 full-splice_match RBM12B ENST00000399300.6 7269 3 35 3403 no_subtype FALSE canonical NA NA 102 None 3 9 0 FALSE 0 0 NA A coding 1001 3003 180 3182 PB.9758.9 chr19 - 4252 25 full-splice_match TYK2 ENST00000525621.5 4347 25 89 6 no_subtype FALSE canonical NA NA 208 None 2 8 1 FALSE 0 0 NA C coding 1180 3540 415 3954 PB.1924.6 chr2 + 2876 2 genic_intron novelGene_1414 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1787 None 2 21 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.6148.1 chr11 - 6723 33 full-splice_match NUP98 ENST00000324932.11 6973 33 245 5 no_subtype FALSE canonical NA NA 148 None 2 11 0 FALSE 0 0 NA C coding 1800 5400 177 5576 PB.7003.5 chr12 - 3908 15 novel_not_in_catalog CALCOCO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 47 None 2 7 0 FALSE 0 0 NA C coding 633 1899 72 1970 PB.9758.5 chr19 - 4130 25 novel_in_catalog TYK2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 86 None 24 5 1 FALSE 0 0 NA C coding 1180 3540 293 3832 PB.7003.6 chr12 - 3944 14 full-splice_match CALCOCO1 ENST00000548263.5 3888 14 -58 2 no_subtype FALSE canonical NA NA 83 None 2 13 1 FALSE 0 0 NA C coding 633 1899 108 2006 PB.2788.2 chr4 - 3261 10 novel_not_in_catalog RELL1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 177 None 2 24 2 TRUE 0 0 NA B coding 271 813 90 902 PB.9758.2 chr19 - 4050 25 novel_not_in_catalog TYK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 78 None 5 5 0 FALSE 0 0 NA C coding 1183 3549 195 3743 PB.2788.1 chr4 + 1390 2 genic_intron novelGene_370 novel NA NA NA NA no_subtype TRUE canonical NA NA 1247 None 3 19 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8971.1 chr17 - 1942 5 full-splice_match GRAP ENST00000284154.9 2651 5 680 29 no_subtype FALSE canonical NA NA 109 None 49 9 0 FALSE 0 0 NA C coding 217 651 32 682 PB.3700.11 chr5 - 2762 4 novel_not_in_catalog MGAT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 112 None 3 9 0 TRUE 0 0 NA B coding 445 1335 358 1692 PB.3700.10 chr5 - 2697 4 novel_not_in_catalog MGAT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 47 None 44 9 0 TRUE 0 0 NA B coding 445 1335 293 1627 PB.1002.6 chr1 - 1702 6 novel_not_in_catalog RAB29 novel NA NA NA NA no_subtype FALSE canonical NA NA 65 None 7 6 0 FALSE 0 0 NA B coding 203 609 201 809 PB.1002.7 chr1 - 2834 4 novel_in_catalog RAB29 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 278 None 2 8 0 FALSE 0 0 NA B coding 167 501 155 655 PB.1002.4 chr1 - 2627 9 novel_not_in_catalog RAB29 novel NA NA NA NA no_subtype FALSE canonical NA NA 86 None 4 10 1 TRUE 0 0 NA B coding 203 609 222 830 PB.5999.4 chr10 + 2757 4 full-splice_match WBP1L ENST00000369889.5 4107 4 -60 1410 no_subtype FALSE canonical NA NA 494 None 4 10 0 FALSE 0 0 NA C coding 342 1026 203 1228 PB.9583.1 chr18 + 1892 2 full-splice_match PMAIP1 ENST00000316660.6 1948 2 53 3 no_subtype FALSE canonical NA NA 235 None 10 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7798.1 chr14 + 3271 1 incomplete-splice_match PSEN1 ENST00000324501.9 6078 12 2804 4 no_subtype FALSE canonical NA NA NA None 4 31 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7348.2 chr12 - 2625 4 novel_not_in_catalog VPS37B novel NA NA NA NA no_subtype FALSE canonical NA NA 100 None 7 15 0 FALSE 0 0 NA C coding 239 717 128 844 PB.4343.1 chr7 + 3131 2 genic_intron novelGene_274 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3063 None 2 18 1 FALSE 0 0 NA A coding 100 300 2769 3068 PB.6419.2 chr11 + 917 5 full-splice_match ARL2 ENST00000246747.8 979 5 58 4 no_subtype FALSE canonical NA NA 457 None 3 2 0 FALSE 0 0 NA C coding 184 552 38 589 PB.946.28 chr1 + 2663 25 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2618 None 7 4 0 TRUE 0 0 NA B coding 850 2550 114 2663 PB.4795.1 chr8 - 4043 3 full-splice_match FAM167A ENST00000284486.8 4094 3 26 25 no_subtype FALSE canonical NA NA 116 None 4 32 0 FALSE 0 0 NA A coding 214 642 514 1155 PB.6419.1 chr11 + 1009 6 novel_not_in_catalog ARL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 550 None 2 4 0 FALSE 0 0 NA C coding 159 477 41 517 PB.583.1 chr1 - 2768 22 novel_not_in_catalog PTPN22 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 217 None 17 2 1 TRUE 0 0 NA B coding 807 2421 131 2551 PB.4339.2 chr7 - 1485 17 novel_not_in_catalog SKAP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 212 None 53 1 0 TRUE 0 0 NA B coding 359 1077 146 1222 PB.2654.8 chr3 + 3124 10 novel_not_in_catalog EIF4A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 912 None 2 23 2 TRUE 0 0 NA C coding 273 819 180 998 PB.5905.2 chr10 + 2816 2 full-splice_match IFIT5 ENST00000371795.4 4015 2 188 1011 no_subtype FALSE canonical NA NA 30 None 24 13 0 FALSE 0 0 NA C coding 482 1446 26 1471 PB.11235.1 GL000213.1 - 2915 1 intergenic novelGene_1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 12 0 FALSE 0 0 NA A coding 180 540 201 740 PB.5019.2 chr8 + 3092 26 novel_in_catalog INTS8 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2901 None 2 3 0 FALSE 0 0 NA C coding 958 2874 142 3015 PB.5019.3 chr8 + 3021 27 novel_not_in_catalog INTS8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2830 None 2 4 0 FALSE 0 0 NA C coding 886 2658 287 2944 PB.4264.1 chr7 - 2976 19 novel_not_in_catalog MICALL2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 287 None 8 12 3 TRUE 0 0 NA A coding 642 1926 912 2837 PB.5019.1 chr8 + 3197 27 full-splice_match INTS8 ENST00000523731.5 4633 27 7 1429 no_subtype FALSE canonical NA NA 2997 None 24 1 0 FALSE 0 0 NA C coding 995 2985 127 3111 PB.2538.8 chr3 + 1153 1 novel_in_catalog MBNL1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 152 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2654.1 chr3 + 1814 12 novel_not_in_catalog EIF4A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1050 None 2 11 3 TRUE 0 0 NA C coding 386 1158 35 1192 PB.3459.3 chr5 - 6356 29 novel_not_in_catalog RAPGEF6 novel NA NA NA NA no_subtype FALSE canonical NA NA 265 None 8 2 0 TRUE 0 0 NA B coding 1601 4803 197 4999 PB.3795.26 chr6 + 2864 8 full-splice_match BTN2A1 ENST00000312541.9 2920 8 54 2 no_subtype FALSE canonical NA NA 1176 None 70 10 1 FALSE 0 0 NA C coding 527 1581 195 1775 PB.3795.27 chr6 + 2751 7 full-splice_match BTN2A1 ENST00000541522.5 2845 7 75 19 no_subtype FALSE canonical NA NA 1064 None 23 5 0 FALSE 0 0 NA C coding 466 1398 266 1663 PB.2137.1 chr3 + 4139 21 full-splice_match LARS2 ENST00000415258.5 4744 21 17 588 no_subtype TRUE canonical NA NA 2656 None 2 12 0 FALSE 0 0 NA A coding 903 2709 125 2833 PB.3795.22 chr6 + 2899 11 novel_not_in_catalog BTN3A3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1155 None 3 10 0 TRUE 0 0 NA B coding 556 1668 222 1889 PB.3795.23 chr6 + 2903 10 novel_not_in_catalog BTN3A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1170 None 2 12 1 TRUE 0 0 NA B coding 575 1725 180 1904 PB.3795.20 chr6 + 2942 11 novel_not_in_catalog BTN3A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1198 None 26 10 0 TRUE 0 0 NA B coding 582 1746 187 1932 PB.3795.21 chr6 + 1507 13 novel_not_in_catalog BTN3A3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1449 None 4 5 1 TRUE 0 0 NA B coding 365 1095 222 1316 PB.6523.1 chr11 + 2502 14 full-splice_match PPME1 ENST00000328257.12 2677 14 174 1 no_subtype FALSE canonical NA NA 1291 None 2 10 1 FALSE 0 0 NA C coding 356 1068 240 1307 PB.8883.1 chr17 + 1774 7 full-splice_match XAF1 ENST00000361842.7 3623 7 236 1613 no_subtype FALSE canonical NA NA 852 None 6 2 0 FALSE 0 0 NA A coding 301 903 4 906 PB.3795.28 chr6 + 1636 1 genic_intron novelGene_257 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 18 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6861.1 chr12 - 3779 1 antisense novelGene_ETNK1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 26 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6937.1 chr12 - 2806 1 incomplete-splice_match CCNT1 ENST00000618666.4 6915 8 3731 379 no_subtype FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8597.1 chr16 - 3076 7 full-splice_match N4BP1 ENST00000262384.3 7106 7 223 3807 no_subtype FALSE canonical NA NA 212 None 2 11 0 FALSE 0 0 NA A coding 896 2688 15 2702 PB.5407.1 chr9 - 1478 12 full-splice_match ERP44 ENST00000262455.6 4854 12 50 3326 no_subtype FALSE canonical NA NA 207 None 74 2 0 FALSE 0 0 NA A coding 406 1218 151 1368 PB.5886.1 chr10 - 1482 1 antisense novelGene_BMPR1A_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.946.20 chr1 + 2968 31 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2922 None 6 5 1 TRUE 0 0 NA B coding 925 2775 193 2967 PB.9276.3 chr17 - 2074 16 novel_in_catalog USP32 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 186 None 3 0 0 FALSE 0 0 NA B coding 648 1944 129 2072 PB.9276.2 chr17 - 7012 34 novel_in_catalog USP32 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 195 None 2 11 1 FALSE 0 0 NA B coding 1618 4854 138 4991 PB.3838.2 chr6 + 1800 10 novel_not_in_catalog PPT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1228 None 3 4 1 TRUE 0 0 NA B coding 302 906 201 1106 PB.3838.1 chr6 + 1684 10 novel_not_in_catalog PPT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1113 None 7 4 2 TRUE 0 0 NA B coding 302 906 86 991 PB.5968.3 chr10 - 1407 1 novel_in_catalog BLOC1S2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.946.22 chr1 + 2757 29 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2659 None 2 10 3 TRUE 0 0 NA B coding 856 2568 188 2755 PB.3698.1 chr5 - 3015 19 novel_not_in_catalog GFPT2 novel NA NA NA NA no_subtype FALSE canonical NA NA 104 None 10 8 1 FALSE 0 0 NA A coding 357 1071 1077 2147 PB.7564.1 chr13 + 3680 15 full-splice_match ERCC5 ENST00000355739.8 5082 15 1384 18 no_subtype TRUE non_canonical NA NA 3003 None 25 3 0 FALSE 0 0 NA A coding 1186 3558 40 3597 PB.946.23 chr1 + 1870 14 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1233 None 2 5 1 TRUE 0 0 NA B coding 397 1191 180 1370 PB.1220.1 chr2 + 3438 7 antisense novelGene_AC012074.2_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1203 None 2 22 3 FALSE 0 0 NA A coding 192 576 1912 2487 PB.1633.12 chr2 - 5402 2 novel_not_in_catalog ZEB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 465 None 7 21 0 TRUE 0 0 NA C coding 142 426 1622 2047 PB.10478.1 chr20 - 3572 14 incomplete-splice_match DIDO1 ENST00000395343.5 8477 16 279 4626 5prime_fragment FALSE canonical NA NA 824 None 2 2 0 FALSE 0 0 NA B coding 1107 3321 250 3570 PB.3957.1 chr6 + 2888 14 full-splice_match MEP1A ENST00000230588.8 2892 14 -1 5 no_subtype TRUE canonical NA NA 2094 None 6 3 0 FALSE 0 0 NA A coding 746 2238 11 2248 PB.10478.3 chr20 - 2785 7 novel_not_in_catalog DIDO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 125 None 15 8 0 TRUE 0 0 NA B coding 562 1686 325 2010 PB.10478.5 chr20 - 2949 7 novel_not_in_catalog DIDO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 5 8 0 FALSE 0 0 NA B coding 562 1686 486 2171 PB.1633.14 chr2 - 1444 1 full-splice_match ZEB2 ENST00000625161.1 3061 1 -474 2091 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA C coding 142 426 983 1408 PB.5880.1 chr10 + 3007 2 genic_intron novelGene_767 novel NA NA NA NA no_subtype FALSE canonical NA NA 240 None 4 19 0 FALSE 0 0 NA A coding 180 540 2024 2563 PB.7616.4 chr14 - 1598 10 full-splice_match HAUS4 ENST00000541587.5 1637 10 36 3 no_subtype FALSE canonical NA NA 191 None 2 3 1 FALSE 0 0 NA C coding 363 1089 214 1302 PB.6900.3 chr12 + 2925 21 novel_not_in_catalog DNM1L novel NA NA NA NA no_subtype FALSE canonical NA NA 2198 None 2 2 0 TRUE 0 0 NA B coding 736 2208 45 2252 PB.7616.3 chr14 - 1641 10 novel_in_catalog HAUS4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 214 None 3 5 1 FALSE 0 0 NA C coding 200 600 237 836 PB.7616.2 chr14 - 1616 10 full-splice_match HAUS4 ENST00000206474.11 1642 10 22 4 no_subtype FALSE canonical NA NA 209 None 22 3 0 FALSE 0 0 NA C coding 363 1089 232 1320 PB.2019.12 chr3 + 6064 6 novel_not_in_catalog SLC6A6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1322 None 2 35 1 TRUE 0 0 NA B coding 318 954 625 1578 PB.8940.1 chr17 - 3002 9 novel_not_in_catalog TRIM16 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 167 None 2 11 1 TRUE 0 0 NA A coding 468 1404 348 1751 PB.2019.17 chr3 + 2899 1 genic_intron novelGene_118 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 19 0 FALSE 0 0 NA A coding 175 525 2035 2559 PB.6210.1 chr11 + 3262 13 full-splice_match PARVA ENST00000334956.12 4458 13 431 765 no_subtype FALSE canonical NA NA 1074 None 47 11 0 FALSE 0 0 NA A coding 372 1116 33 1148 PB.6966.2 chr12 - 2508 11 full-splice_match LIMA1 ENST00000341247.8 3706 11 64 1134 no_subtype FALSE canonical NA NA 63 None 32 1 0 FALSE 0 0 NA C coding 759 2277 87 2363 PB.6966.3 chr12 - 3716 12 novel_not_in_catalog LIMA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 40 None 2 14 1 TRUE 0 0 NA C coding 759 2277 173 2449 PB.6524.3 chr11 - 2534 14 full-splice_match PGM2L1 ENST00000298198.4 8515 14 5 5976 no_subtype FALSE canonical NA NA 418 None 6 2 0 FALSE 0 0 NA C coding 622 1866 308 2173 PB.7730.1 chr14 + 2782 5 full-splice_match NAA30 ENST00000556492.5 7644 5 110 4752 no_subtype FALSE canonical NA NA 995 None 3 9 0 FALSE 0 0 NA A coding 362 1086 45 1130 PB.2019.19 chr3 + 2687 1 novel_in_catalog SLC6A6 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 14 9 0 FALSE 0 0 NA B coding 120 360 1554 1913 PB.4602.12 chr7 - 3121 22 novel_not_in_catalog SLC26A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 110 None 2 14 2 FALSE 0 0 NA C coding 764 2292 449 2740 PB.4239.2 chr6 + 6125 35 novel_in_catalog IGF2R novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5303 None 2 4 0 FALSE 0 0 NA B coding 1788 5364 348 5711 PB.6600.3 chr11 - 3194 15 full-splice_match MTMR2 ENST00000346299.9 4681 15 272 1215 no_subtype FALSE canonical NA NA 149 None 4 8 0 FALSE 0 0 NA C coding 643 1929 70 1998 PB.9397.1 chr17 - 1593 2 antisense novelGene_SEC14L1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 57 None 7 8 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6600.1 chr11 + 3091 11 full-splice_match CEP57 ENST00000325542.9 3178 11 83 4 no_subtype FALSE canonical NA NA 1427 None 22 12 0 FALSE 0 0 NA C coding 500 1500 156 1655 PB.8019.1 chr15 - 3886 7 novel_not_in_catalog EHD4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 298 None 33 15 1 TRUE 0 0 NA C coding 541 1623 63 1685 PB.2257.3 chr3 - 3565 11 novel_not_in_catalog ARHGEF3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 247 None 104 12 1 TRUE 0 0 NA C coding 526 1578 152 1729 PB.8019.2 chr15 - 2887 6 full-splice_match EHD4 ENST00000220325.8 6416 6 21 3508 no_subtype FALSE canonical NA NA 299 None 46 5 0 FALSE 0 0 NA C coding 541 1623 64 1686 PB.9495.2 chr18 + 1075 7 full-splice_match PSMG2 ENST00000317615.10 1686 7 608 3 no_subtype FALSE canonical NA NA 776 None 3 4 0 FALSE 0 0 NA C coding 264 792 75 866 PB.9495.3 chr18 + 1875 7 novel_not_in_catalog PSMG2 novel NA NA NA NA no_subtype FALSE canonical NA NA 640 None 3 9 0 TRUE 0 0 NA C coding 240 720 60 779 PB.9495.1 chr18 + 1082 8 novel_not_in_catalog PSMG2 novel NA NA NA NA no_subtype TRUE canonical NA NA 783 None 7 6 0 TRUE 0 0 NA C coding 264 792 82 873 PB.7801.13 chr14 - 1539 2 genic_intron novelGene_688 novel NA NA NA NA no_subtype FALSE canonical NA NA 1266 None 2 9 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6988.1 chr12 + 946 4 full-splice_match IGFBP6 ENST00000301464.3 1169 4 222 1 no_subtype FALSE canonical NA NA 651 None 3 4 0 FALSE 0 0 NA A coding 240 720 52 771 PB.6187.1 chr11 - 4075 19 novel_not_in_catalog ST5 novel NA NA NA NA no_subtype FALSE canonical NA NA 1263 None 3 4 0 TRUE 0 0 NA A coding 957 2871 464 3334 PB.10551.2 chr21 - 7388 2 novel_in_catalog RUNX1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 110 None 2 32 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10883.1 chrX + 1479 11 full-splice_match ZRSR2 ENST00000307771.7 1491 11 2 10 no_subtype FALSE canonical NA NA 959 None 4 17 3 FALSE 0 0 NA A coding 482 1446 23 1468 PB.9760.4 chr19 + 1876 1 incomplete-splice_match PDE4A ENST00000380702.6 4781 15 2902 4 no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1863.1 chr2 - 1725 3 novel_in_catalog ZNF142 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 420 None 2 7 0 FALSE 0 0 NA A coding 115 345 556 900 PB.9760.1 chr19 + 2704 16 novel_not_in_catalog PDE4A novel NA NA NA NA no_subtype FALSE canonical NA NA 1698 None 14 6 2 TRUE 0 0 NA B coding 730 2190 241 2430 PB.2324.1 chr3 - 3806 5 genic STX19 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2388 None 3 32 2 TRUE 0 0 NA A non_coding NA NA NA NA PB.9760.3 chr19 + 2836 16 novel_not_in_catalog PDE4A novel NA NA NA NA no_subtype FALSE canonical NA NA 1830 None 2 5 0 TRUE 0 0 NA B coding 825 2475 88 2562 PB.7895.4 chr14 - 2672 10 novel_not_in_catalog SYNE3 novel NA NA NA NA no_subtype FALSE canonical NA NA 64 None 2 9 2 TRUE 0 0 NA B coding 596 1788 79 1866 PB.10902.1 chrX + 3161 1 incomplete-splice_match ZFX ENST00000539115.5 6801 6 3465 176 no_subtype FALSE canonical NA NA NA None 16 25 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8954.1 chr17 - 1316 8 novel_not_in_catalog ATPAF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 294 None 6 2 1 FALSE 0 0 NA A coding 208 624 162 785 PB.3514.1 chr5 - 821 4 full-splice_match MZB1 ENST00000302125.8 825 4 1 3 no_subtype FALSE canonical NA NA 234 None 3 1 0 FALSE 0 0 NA A coding 189 567 58 624 PB.3924.1 chr6 + 2791 1 genic_intron novelGene_427 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 34 0 FALSE 0 0 NA A coding 142 426 656 1081 PB.6535.5 chr11 - 5513 2 novel_not_in_catalog ARRB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3059 None 2 29 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.6026.3 chr10 + 3329 21 full-splice_match ACSL5 ENST00000356116.5 3353 21 14 10 no_subtype FALSE canonical NA NA 2177 None 35 7 0 FALSE 0 0 NA C coding 739 2217 99 2315 PB.1884.1 chr2 - 1901 17 full-splice_match FARSB ENST00000281828.6 3369 17 245 1223 no_subtype FALSE canonical NA NA 77 None 14 0 0 FALSE 0 0 NA A coding 589 1767 20 1786 PB.6910.2 chr12 - 3361 8 novel_in_catalog PRICKLE1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 281 None 4 10 0 FALSE 0 0 NA A coding 827 2481 339 2819 PB.4196.1 chr6 + 4498 17 novel_in_catalog PLEKHG1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 3335 None 2 4 0 FALSE 0 0 NA B coding 1385 4155 242 4396 PB.6362.3 chr11 + 3055 18 novel_not_in_catalog TKFC novel NA NA NA NA no_subtype FALSE canonical NA NA 2497 None 10 5 0 FALSE 0 0 NA B coding 575 1725 923 2647 PB.4507.1 chr7 + 1906 5 full-splice_match RBM48 ENST00000265732.9 1742 5 26 -190 no_subtype TRUE canonical NA NA 1032 None 5 6 0 FALSE 0 0 NA C coding 367 1101 16 1116 PB.7632.5 chr14 + 1561 10 full-splice_match GMPR2 ENST00000399440.6 1652 10 86 5 no_subtype FALSE canonical NA NA 912 None 2 1 0 FALSE 0 0 NA C coding 348 1044 56 1099 PB.7632.4 chr14 + 3799 9 novel_in_catalog GMPR2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3150 None 2 12 0 FALSE 0 0 NA C coding 194 582 2756 3337 PB.7632.3 chr14 + 1692 10 novel_not_in_catalog GMPR2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1047 None 2 5 1 FALSE 0 0 NA C coding 350 1050 185 1234 PB.7632.2 chr14 + 1482 10 full-splice_match GMPR2 ENST00000355299.8 1972 10 320 170 no_subtype FALSE canonical NA NA 998 None 20 3 0 FALSE 0 0 NA C coding 348 1044 142 1185 PB.7632.1 chr14 + 1677 10 novel_in_catalog GMPR2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1065 None 3 3 0 FALSE 0 0 NA C coding 309 927 209 1135 PB.9770.1 chr19 - 1253 5 novel_not_in_catalog TMED1 novel NA NA NA NA no_subtype FALSE canonical NA NA 204 None 3 2 0 TRUE 0 0 NA A coding 227 681 22 702 PB.1779.3 chr2 - 1605 12 novel_not_in_catalog HSPD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 59 None 2 1 1 TRUE 0 0 NA C coding 297 891 714 1604 PB.4379.1 chr7 + 3473 2 novel_in_catalog EPDR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 383 None 2 14 0 FALSE 0 0 NA A coding 192 576 115 690 PB.7959.258 chr14 - 1895 8 fusion IGHV4-4,IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 13 1 TRUE 0 0 NA B coding 375 1125 649 1773 PB.1082.5 chr1 - 2959 25 full-splice_match TMEM63A ENST00000366835.7 4098 25 38 1101 no_subtype FALSE canonical NA NA 28 None 22 2 0 FALSE 0 0 NA C coding 807 2421 234 2654 PB.1082.2 chr1 - 5670 23 novel_in_catalog TMEM63A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 19 None 3 28 0 FALSE 0 0 NA C coding 816 2448 225 2672 PB.4062.1 chr6 - 1394 4 full-splice_match SNX3 ENST00000230085.12 1755 4 65 296 no_subtype FALSE canonical NA NA 436 None 30 3 0 FALSE 0 0 NA A coding 162 486 275 760 PB.9353.1 chr17 - 1844 12 full-splice_match FDXR ENST00000293195.9 1875 12 22 9 no_subtype FALSE canonical NA NA 136 None 4 2 0 FALSE 0 0 NA A coding 491 1473 58 1530 PB.1779.4 chr2 - 1210 10 novel_not_in_catalog HSPD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 54 None 2 1 1 TRUE 0 0 NA C coding 209 627 57 683 PB.4284.1 chr7 + 1700 15 full-splice_match CCZ1 ENST00000325974.8 1802 15 97 5 no_subtype FALSE canonical NA NA 1362 None 19 4 0 FALSE 0 0 NA A coding 381 1143 273 1415 PB.5721.1 chr10 - 3292 18 novel_not_in_catalog MPP7 novel NA NA NA NA no_subtype FALSE canonical NA NA 161 None 3 9 0 TRUE 0 0 NA A coding 536 1608 413 2020 PB.7959.250 chr14 - 1701 7 novel_not_in_catalog IGHM novel NA NA NA NA no_subtype FALSE non_canonical NA NA 20 None 2 1 0 TRUE 0 0 NA B coding 396 1188 256 1443 PB.260.1 chr1 - 1283 5 full-splice_match TRAPPC3 ENST00000373166.7 1265 5 -22 4 no_subtype FALSE canonical NA NA 155 None 16 4 0 FALSE 0 0 NA A coding 180 540 114 653 PB.6980.1 chr12 + 4052 10 novel_not_in_catalog ACVRL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3323 None 2 14 1 TRUE 0 0 NA A coding 517 1551 44 1594 PB.7959.254 chr14 - 1697 7 novel_not_in_catalog IGHM novel NA NA NA NA no_subtype TRUE canonical NA NA 20 None 3 1 0 TRUE 0 0 NA B coding 396 1188 254 1441 PB.7959.255 chr14 - 2196 11 fusion IGHV3-20,IGHM novel NA NA NA NA no_subtype TRUE non_canonical NA NA 120 None 2 8 1 TRUE 0 0 NA A coding 622 1866 75 1940 PB.6676.1 chr11 + 3498 20 novel_not_in_catalog PHLDB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2155 None 16 2 0 TRUE 0 0 NA B coding 764 2292 2 2293 PB.6676.2 chr11 + 3385 19 novel_not_in_catalog PHLDB1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2046 None 2 1 0 TRUE 0 0 NA B coding 721 2163 22 2184 PB.5290.2 chr9 - 1855 4 antisense novelGene_GLIPR2_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 101 None 6 10 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.2664.1 chr3 + 3871 6 genic LPP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3717 None 2 30 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.6505.1 chr11 + 5937 13 fusion IL18BP,RNF121 novel NA NA NA NA no_subtype FALSE canonical NA NA 5191 None 2 37 2 FALSE 0 0 NA A coding 327 981 32 1012 PB.823.1 chr1 + 2767 5 full-splice_match RGS4 ENST00000367909.10 3200 5 217 216 no_subtype FALSE canonical NA NA 501 None 2 15 0 FALSE 0 0 NA A coding 205 615 124 738 PB.8696.1 chr16 + 5854 18 novel_in_catalog PRMT7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2035 None 2 58 0 FALSE 0 0 NA A coding 692 2076 128 2203 PB.5361.21 chr9 + 956 2 genic_intron novelGene_835 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 278 None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10017.1 chr19 + 508 6 full-splice_match RPS19 ENST00000598742.5 2359 6 337 1514 no_subtype FALSE canonical NA NA 446 None 3 0 0 FALSE 0 0 NA A coding 145 435 36 470 PB.912.6 chr1 - 1761 7 novel_not_in_catalog NCF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 268 None 5 8 0 TRUE 0 0 NA B coding 227 681 95 775 PB.5901.5 chr10 + 2083 3 novel_not_in_catalog IFIT3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1695 None 55 1 0 TRUE 0 0 NA B coding 490 1470 85 1554 PB.7519.1 chr13 + 2754 18 full-splice_match PIBF1 ENST00000326291.10 3154 18 79 321 no_subtype TRUE canonical NA NA 2482 None 10 2 0 FALSE 0 0 NA A coding 757 2271 260 2530 PB.5270.9 chr9 + 1697 13 full-splice_match IL11RA ENST00000441545.6 1700 13 0 3 no_subtype FALSE canonical NA NA 1294 None 6 2 0 FALSE 0 0 NA C coding 422 1266 43 1308 PB.5270.8 chr9 + 1297 11 full-splice_match GALT ENST00000378842.7 1768 11 17 454 no_subtype FALSE canonical NA NA 1084 None 4 2 0 FALSE 0 0 NA C coding 379 1137 26 1162 PB.2299.1 chr3 + 1989 1 antisense novelGene_FOXP1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 25 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1981.1 chr3 - 2994 2 antisense novelGene_THUMPD3_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 256 None 2 31 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1981.2 chr3 - 3011 1 novel_in_catalog THUMPD3-AS1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 40 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8192.6 chr15 - 2869 11 novel_in_catalog PKM novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 75 None 3 4 0 FALSE 0 0 NA C coding 436 1308 89 1396 PB.5270.3 chr9 + 2660 22 novel_not_in_catalog IL11RA novel NA NA NA NA no_subtype FALSE canonical NA NA 2257 None 11 2 0 FALSE 0 0 NA C coding 727 2181 91 2271 PB.2773.1 chr4 - 2719 1 incomplete-splice_match LGI2 ENST00000382114.8 6428 8 3707 3 no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A coding 110 330 1617 1946 PB.5270.1 chr9 + 3190 3 novel_in_catalog GALT novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1024 None 2 9 0 FALSE 0 0 NA C coding 87 261 70 330 PB.5901.7 chr10 + 2084 3 novel_not_in_catalog IFIT3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1702 None 51 0 0 TRUE 0 0 NA B coding 490 1470 92 1561 PB.11121.1 chrX + 3628 2 genic_intron novelGene_1044 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1173 None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5270.5 chr9 + 3614 1 novel_in_catalog GALT novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA C coding 179 537 2859 3395 PB.5270.4 chr9 + 2912 5 full-splice_match GALT ENST00000487381.5 1442 5 -16 -1454 no_subtype FALSE canonical NA NA 965 None 2 16 1 FALSE 0 0 NA C coding 87 261 43 303 PB.8994.1 chr17 - 2111 12 novel_not_in_catalog POLDIP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 236 None 15 5 0 TRUE 0 0 NA A coding 368 1104 76 1179 PB.143.5 chr1 - 2909 6 novel_not_in_catalog SRSF10 novel NA NA NA NA no_subtype FALSE canonical NA NA 137 None 3 8 0 FALSE 0 0 NA C coding 167 501 351 851 PB.1296.1 chr2 - 1116 3 full-splice_match COX7A2L ENST00000234301.2 1112 3 -1 -3 no_subtype FALSE canonical NA NA 128 None 3 3 0 FALSE 0 0 NA C coding 114 342 57 398 PB.2120.1 chr3 - 2764 7 full-splice_match SEC22C ENST00000264454.7 1380 7 17 -1401 no_subtype FALSE canonical NA NA 100 None 12 8 0 FALSE 0 0 NA A coding 303 909 128 1036 PB.3061.1 chr4 - 2803 2 genic_intron novelGene_1196 novel NA NA NA NA no_subtype FALSE canonical NA NA 978 None 6 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.635.1 chr1 + 1609 3 antisense novelGene_ACP6_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1462 None 5 7 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4365.1 chr7 + 3354 18 novel_not_in_catalog BMPER novel NA NA NA NA no_subtype TRUE canonical NA NA 1957 None 4 3 0 TRUE 0 0 NA A coding 685 2055 82 2136 PB.143.3 chr1 - 1826 6 full-splice_match SRSF10 ENST00000453840.7 1808 6 -30 12 no_subtype FALSE canonical NA NA 136 None 34 6 0 FALSE 0 0 NA C coding 182 546 72 617 PB.8192.3 chr15 - 2147 10 incomplete-splice_match PKM ENST00000335181.9 2318 11 170 1 5prime_fragment FALSE canonical NA NA 88 None 6 5 0 FALSE 0 0 NA C coding 502 1506 22 1527 PB.11206.10 chrX - 7613 43 novel_not_in_catalog FLNA novel NA NA NA NA no_subtype TRUE canonical NA NA 345 None 2 4 0 FALSE 0 0 NA C coding 2413 7239 54 7292 PB.631.1 chr1 - 1420 1 genic_intron novelGene_1226 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6475.1 chr11 + 3075 6 novel_not_in_catalog RAD9A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2273 None 9 13 2 TRUE 0 0 NA A non_coding NA NA NA NA PB.6313.1 chr11 - 2726 1 incomplete-splice_match CELF1 ENST00000395290.6 7666 13 4294 647 no_subtype FALSE canonical NA NA NA None 5 14 0 FALSE 0 0 NA B coding 109 327 2264 2590 PB.8660.1 chr16 - 1808 21 novel_not_in_catalog NAE1 novel NA NA NA NA no_subtype FALSE canonical NA NA 130 None 19 1 0 TRUE 0 0 NA A coding 534 1602 78 1679 PB.9528.2 chr18 - 3866 8 incomplete-splice_match KLHL14 ENST00000359358.8 4312 9 439 7 5prime_fragment FALSE canonical NA NA 947 None 2 10 0 FALSE 0 0 NA B coding 628 1884 1 1884 PB.9528.1 chr18 - 3872 9 novel_not_in_catalog KLHL14 novel NA NA NA NA no_subtype TRUE canonical NA NA 947 None 4 13 1 TRUE 0 0 NA B coding 492 1476 1 1476 PB.6336.2 chr11 + 1772 1 novel_in_catalog CTNND1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10918.1 chrX - 3784 11 incomplete-splice_match BCOR ENST00000378455.8 6338 14 2538 16 5prime_fragment FALSE canonical NA NA 822 None 2 3 0 FALSE 0 0 NA A coding 976 2928 7 2934 PB.1652.2 chr2 + 5490 18 novel_not_in_catalog GPD2 novel NA NA NA NA no_subtype TRUE canonical NA NA 2732 None 4 16 1 TRUE 0 0 NA B coding 727 2181 142 2322 PB.6270.2 chr11 + 6079 2 novel_not_in_catalog CAT novel NA NA NA NA no_subtype TRUE canonical NA NA 716 None 4 34 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.9343.1 chr17 + 3425 14 full-splice_match TTYH2 ENST00000269346.8 3490 14 58 7 no_subtype FALSE canonical NA NA 1540 None 14 14 0 FALSE 0 0 NA A coding 534 1602 17 1618 PB.8039.1 chr15 - 3208 6 novel_in_catalog ZSCAN29 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 488 None 8 4 0 FALSE 0 0 NA A coding 851 2553 604 3156 PB.6270.1 chr11 + 2234 13 full-splice_match CAT ENST00000241052.4 2302 13 56 12 no_subtype FALSE canonical NA NA 1551 None 23 4 0 FALSE 0 0 NA C coding 527 1581 34 1614 PB.1550.6 chr2 + 3308 11 novel_not_in_catalog SLC20A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2355 None 5 15 1 FALSE 0 0 NA C coding 686 2058 457 2514 PB.9989.1 chr19 - 1308 1 full-splice_match EID2B ENST00000326282.4 1865 1 0 557 no_subtype FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA A coding 161 483 53 535 PB.1550.4 chr2 + 1824 3 novel_not_in_catalog SLC20A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 866 None 2 15 1 TRUE 0 0 NA C coding 183 549 457 1005 PB.6270.5 chr11 + 1296 6 novel_in_catalog CAT novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 617 None 2 4 0 FALSE 0 0 NA C coding 189 567 114 680 PB.5749.1 chr10 + 4147 5 full-splice_match ZNF33A ENST00000432900.6 3994 5 25 -178 no_subtype FALSE canonical NA NA 384 None 4 16 0 FALSE 0 0 NA A coding 811 2433 135 2567 PB.1989.1 chr3 + 1581 2 full-splice_match JAGN1 ENST00000307768.4 1693 2 107 5 no_subtype FALSE canonical NA NA 151 None 6 8 0 FALSE 0 0 NA A coding 183 549 63 611 PB.1765.2 chr2 + 1497 2 antisense novelGene_STK17B_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 147 None 4 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1346.1 chr2 + 3524 15 novel_not_in_catalog VRK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1769 None 2 16 1 TRUE 0 0 NA A coding 508 1524 61 1584 PB.8587.1 chr16 - 2766 13 novel_not_in_catalog SHCBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 53 None 5 2 0 FALSE 0 0 NA C coding 613 1839 128 1966 PB.1346.2 chr2 + 2637 1 antisense novelGene_FANCL_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9295.2 chr17 - 2590 21 full-splice_match FTSJ3 ENST00000427159.6 3559 21 566 403 no_subtype FALSE canonical NA NA 54 None 50 3 0 FALSE 0 0 NA C coding 836 2508 81 2588 PB.4714.6 chr7 - 2922 8 full-splice_match MKRN1 ENST00000474576.5 1661 8 -66 -1195 no_subtype FALSE canonical NA NA 214 None 4 7 0 FALSE 0 0 NA C coding 418 1254 222 1475 PB.1760.1 chr2 + 4678 29 full-splice_match MYO1B ENST00000339514.8 5026 29 123 225 no_subtype FALSE canonical NA NA 3350 None 7 7 0 FALSE 0 0 NA A coding 1078 3234 238 3471 PB.804.4 chr1 - 2863 6 novel_in_catalog B4GALT3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 81 None 2 9 0 FALSE 0 0 NA C coding 173 519 1840 2358 PB.804.5 chr1 - 3709 5 novel_in_catalog B4GALT3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2514 None 2 13 0 FALSE 0 0 NA C coding 173 519 2686 3204 PB.804.2 chr1 - 1746 8 novel_in_catalog B4GALT3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 83 None 2 1 0 FALSE 0 0 NA C coding 173 519 723 1241 PB.4714.5 chr7 - 2894 9 novel_not_in_catalog MKRN1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 129 None 2 10 1 TRUE 0 0 NA C coding 418 1254 190 1443 PB.11213.9 chrX + 2210 10 novel_not_in_catalog IKBKG novel NA NA NA NA no_subtype FALSE canonical NA NA 1505 None 2 12 1 FALSE 0 0 NA C coding 216 648 998 1645 PB.1514.2 chr2 + 2486 7 full-splice_match CNOT11 ENST00000289382.7 2599 7 106 7 no_subtype FALSE canonical NA NA 1392 None 3 9 0 FALSE 0 0 NA C coding 510 1530 58 1587 PB.4714.4 chr7 - 1627 1 incomplete-splice_match MKRN1 ENST00000255977.6 3151 8 1496 29 no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.772.1 chr1 - 2647 2 genic_intron novelGene_1271 novel NA NA NA NA no_subtype FALSE canonical NA NA 2121 None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8192.9 chr15 - 900 1 novel_in_catalog PKM novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 2 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4537.1 chr7 - 1715 13 full-splice_match CYP3A5 ENST00000222982.8 1720 13 0 5 no_subtype FALSE canonical NA NA 171 None 22 2 0 FALSE 0 0 NA A coding 502 1506 101 1606 PB.4305.1 chr7 - 1726 2 full-splice_match SOSTDC1 ENST00000307068.4 1869 2 33 110 no_subtype FALSE canonical NA NA 353 None 7 6 0 FALSE 0 0 NA A coding 206 618 149 766 PB.1113.2 chr1 + 2447 17 novel_not_in_catalog GNPAT novel NA NA NA NA no_subtype FALSE canonical NA NA 2154 None 8 8 0 TRUE 0 0 NA B coding 680 2040 156 2195 PB.204.1 chr1 + 2558 3 novel_not_in_catalog RAB42 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2250 None 2 14 1 TRUE 0 0 NA A coding 218 654 7 660 PB.9616.3 chr18 + 3823 34 novel_not_in_catalog ATP9B novel NA NA NA NA no_subtype FALSE canonical NA NA 3740 None 4 9 2 TRUE 0 0 NA B coding 1147 3441 5 3445 PB.6537.2 chr11 + 2038 2 novel_in_catalog SERPINH1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 67 None 2 11 0 FALSE 0 0 NA C coding 261 783 102 884 PB.1514.1 chr2 + 2494 8 novel_not_in_catalog CNOT11 novel NA NA NA NA no_subtype TRUE canonical NA NA 1861 None 3 14 0 TRUE 0 0 NA C coding 510 1530 80 1609 PB.5007.1 chr8 + 3070 6 novel_in_catalog RIPK2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 909 None 2 8 0 FALSE 0 0 NA B coding 291 873 219 1091 PB.9637.4 chr19 + 4223 24 novel_not_in_catalog ARHGAP45 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3948 None 7 18 1 TRUE 0 0 NA C coding 1136 3408 234 3641 PB.9637.5 chr19 + 4198 24 novel_not_in_catalog ARHGAP45 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3233 None 2 18 0 TRUE 0 0 NA C coding 1146 3438 140 3577 PB.9637.6 chr19 + 4043 23 novel_not_in_catalog ARHGAP45 novel NA NA NA NA no_subtype FALSE canonical NA NA 3077 None 2 20 1 TRUE 0 0 NA C coding 1005 3015 99 3113 PB.9637.7 chr19 + 3662 22 incomplete-splice_match ARHGAP45 ENST00000586866.5 4120 23 456 2 internal_fragment FALSE canonical NA NA 2695 None 18 18 0 FALSE 0 0 NA C coding 976 2928 112 3039 PB.9637.1 chr19 + 4251 22 novel_in_catalog ARHGAP45 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3283 None 5 28 0 FALSE 0 0 NA C coding 915 2745 144 2888 PB.9637.2 chr19 + 4105 23 full-splice_match ARHGAP45 ENST00000313093.6 4273 23 166 2 no_subtype FALSE canonical NA NA 3138 None 234 19 0 FALSE 0 0 NA C coding 1136 3408 75 3482 PB.1636.1 chr2 + 2658 1 genic_intron novelGene_1228 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6537.1 chr11 + 2060 5 full-splice_match SERPINH1 ENST00000358171.7 2225 5 167 -2 no_subtype FALSE canonical NA NA 1055 None 26 3 0 FALSE 0 0 NA C coding 418 1254 102 1355 PB.3836.1 chr6 - 2594 18 full-splice_match ATF6B ENST00000375201.8 2624 18 17 13 no_subtype FALSE canonical NA NA 111 None 12 2 0 FALSE 0 0 NA C coding 700 2100 30 2129 PB.3836.2 chr6 - 2341 18 full-splice_match ATF6B ENST00000375203.7 2620 18 4 275 no_subtype FALSE canonical NA NA 120 None 12 1 1 FALSE 0 0 NA C coding 703 2109 30 2138 PB.10943.1 chrX - 1480 9 full-splice_match CFP ENST00000396992.7 1592 9 109 3 no_subtype FALSE canonical NA NA 88 None 294 0 0 FALSE 0 0 NA A coding 469 1407 13 1419 PB.42.1 chr1 - 1765 12 full-splice_match ENO1 ENST00000234590.8 1783 12 10 8 no_subtype FALSE canonical NA NA 101 None 610 5 0 FALSE 0 0 NA C coding 434 1302 111 1412 PB.8290.1 chr15 + 2575 3 novel_in_catalog GDPGP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 133 None 5 15 0 FALSE 0 0 NA A coding 385 1155 143 1297 PB.3959.1 chr6 + 4699 19 novel_not_in_catalog CD2AP novel NA NA NA NA no_subtype FALSE canonical NA NA 1962 None 3 21 1 TRUE 0 0 NA B coding 639 1917 85 2001 PB.7959.48 chr14 - 1486 9 fusion IGHA1,CH17-224D4.1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 122 None 2 14 5 TRUE 0 0 NA A coding 254 762 678 1439 PB.42.5 chr1 - 3456 3 full-splice_match ENO1 ENST00000492343.1 826 3 16 -2646 no_subtype FALSE canonical NA NA 81 None 3 28 0 FALSE 0 0 NA C coding 108 324 245 568 PB.3959.2 chr6 + 3453 18 novel_not_in_catalog CD2AP novel NA NA NA NA no_subtype FALSE canonical NA NA 1875 None 2 11 0 TRUE 0 0 NA B coding 592 1776 139 1914 PB.2866.1 chr4 + 2458 7 full-splice_match DCK ENST00000286648.9 2716 7 249 9 no_subtype FALSE canonical NA NA 904 None 6 14 0 FALSE 0 0 NA A coding 260 780 149 928 PB.3433.1 chr5 + 4226 13 novel_in_catalog DMXL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2666 None 2 14 0 FALSE 0 0 NA A coding 797 2391 413 2803 PB.5941.12 chr10 - 1770 1 genic_intron novelGene_879 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3724.2 chr6 + 853 5 full-splice_match LY86 ENST00000230568.4 559 5 53 -347 no_subtype FALSE canonical NA NA 418 None 2 2 0 FALSE 0 0 NA C coding 162 486 14 499 PB.3724.1 chr6 + 1223 7 novel_not_in_catalog LY86 novel NA NA NA NA no_subtype FALSE canonical NA NA 788 None 2 3 0 TRUE 0 0 NA C coding 191 573 297 869 PB.1012.6 chr1 - 3108 12 novel_not_in_catalog PIGR novel NA NA NA NA no_subtype FALSE canonical NA NA 131 None 10 1 0 TRUE 0 0 NA C coding 764 2292 185 2476 PB.1744.7 chr2 - 2870 8 novel_not_in_catalog SLC40A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 372 None 2 11 0 FALSE 0 0 NA B coding 418 1254 330 1583 PB.9627.1 chr19 - 1072 5 full-splice_match PRSS57 ENST00000329267.8 1025 5 -13 -34 no_subtype FALSE canonical NA NA 123 None 2 1 0 FALSE 0 0 NA A coding 282 846 45 890 PB.4942.1 chr8 + 1369 2 novel_not_in_catalog RP11-25K19.1 novel NA NA NA NA no_subtype FALSE canonical NA NA 76 None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2591.14 chr3 + 1478 1 incomplete-splice_match FNDC3B ENST00000336824.8 7904 26 5454 973 no_subtype FALSE canonical NA NA NA None 23 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6085.1 chr10 - 2977 3 full-splice_match CLRN3 ENST00000368671.3 1152 3 26 -1851 no_subtype FALSE canonical NA NA 366 None 2 10 0 FALSE 0 0 NA A coding 226 678 138 815 PB.3693.5 chr5 + 2616 7 novel_not_in_catalog CANX novel NA NA NA NA no_subtype FALSE canonical NA NA 564 None 4 15 0 TRUE 0 0 NA C coding 177 531 82 612 PB.1334.1 chr2 + 1681 14 full-splice_match ERLEC1 ENST00000185150.8 2433 14 77 675 no_subtype FALSE canonical NA NA 1434 None 27 0 0 FALSE 0 0 NA A coding 483 1449 55 1503 PB.6022.1 chr10 + 1481 14 incomplete-splice_match SMC3 ENST00000361804.4 4114 29 13 2620 3prime_fragment FALSE canonical NA NA 1418 None 7 2 0 FALSE 0 0 NA C coding 456 1368 114 1481 PB.7959.44 chr14 - 1477 8 fusion IGHV5-51,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 103 None 2 12 4 TRUE 0 0 NA B coding 251 753 675 1427 PB.6022.3 chr10 + 2841 24 incomplete-splice_match SMC3 ENST00000361804.4 4114 29 -6 1279 3prime_fragment FALSE non_canonical NA NA 2776 None 2 2 0 FALSE 0 0 NA C coding 903 2709 133 2841 PB.6022.2 chr10 + 4098 29 full-splice_match SMC3 ENST00000361804.4 4114 29 5 11 no_subtype FALSE non_canonical NA NA 3703 None 8 5 0 FALSE 0 0 NA C coding 1217 3651 122 3772 PB.5838.1 chr10 - 2378 12 full-splice_match MICU1 ENST00000361114.9 2383 12 -14 19 no_subtype FALSE canonical NA NA 110 None 6 4 0 FALSE 0 0 NA C coding 476 1428 112 1539 PB.7885.1 chr14 + 613 5 full-splice_match IFI27 ENST00000618200.4 364 5 -11 -238 no_subtype FALSE canonical NA NA 369 None 9 1 0 FALSE 0 0 NA C coding 122 366 87 452 PB.7959.45 chr14 - 1518 8 fusion IGHA1,IGHV3-23 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 117 None 2 11 4 TRUE 0 0 NA B coding 254 762 707 1468 PB.4730.1 chr7 - 2633 20 full-splice_match EZH2 ENST00000460911.5 2591 20 -41 -1 no_subtype FALSE canonical NA NA 123 None 7 2 0 FALSE 0 0 NA A coding 746 2238 131 2368 PB.10005.1 chr19 + 2993 8 incomplete-splice_match AXL ENST00000301178.8 4737 20 1738 6 internal_fragment FALSE canonical NA NA 785 None 3 4 0 FALSE 0 0 NA A coding 365 1095 40 1134 PB.4718.2 chr7 + 1505 4 novel_in_catalog AGK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 177 None 2 4 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7076.1 chr12 - 3136 2 genic_intron novelGene_607 novel NA NA NA NA no_subtype FALSE canonical NA NA 1897 None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1744.3 chr2 - 3311 8 novel_not_in_catalog SLC40A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 368 None 3 12 1 TRUE 0 0 NA B coding 566 1698 326 2023 PB.5210.3 chr9 - 1632 6 novel_not_in_catalog AK3 novel NA NA NA NA no_subtype FALSE canonical NA NA 163 None 2 7 1 TRUE 0 0 NA C coding 157 471 265 735 PB.5210.2 chr9 - 1758 5 full-splice_match AK3 ENST00000381809.7 2736 5 58 920 no_subtype FALSE canonical NA NA 324 None 40 5 0 FALSE 0 0 NA C coding 227 681 174 854 PB.7579.2 chr13 - 1600 14 full-splice_match PCID2 ENST00000337344.8 1898 14 44 254 no_subtype FALSE canonical NA NA 69 None 7 3 0 FALSE 0 0 NA A coding 399 1197 34 1230 PB.2059.1 chr3 - 2027 11 novel_in_catalog NGLY1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 183 None 4 5 0 FALSE 0 0 NA A coding 599 1797 53 1849 PB.7959.43 chr14 - 1458 6 fusion IGHV4-28,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 104 None 3 14 3 TRUE 0 0 NA A coding 450 1350 59 1408 PB.7241.9 chr12 - 2287 15 full-splice_match GIT2 ENST00000547815.5 2989 15 -45 747 no_subtype FALSE canonical NA NA 169 None 8 3 0 FALSE 0 0 NA C coding 471 1413 118 1530 PB.7241.8 chr12 - 2451 1 novel_in_catalog GIT2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 27 0 FALSE 0 0 NA C coding 102 306 14 319 PB.5838.2 chr10 - 2580 12 novel_not_in_catalog MICU1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 100 None 2 16 2 TRUE 0 0 NA C coding 402 1206 102 1307 PB.6721.1 chr11 + 1432 4 novel_not_in_catalog HYLS1 novel NA NA NA NA no_subtype TRUE canonical NA NA 134 None 2 5 1 TRUE 0 0 NA A coding 299 897 157 1053 PB.10184.1 chr19 + 3005 4 novel_not_in_catalog ZNF460 novel NA NA NA NA no_subtype FALSE canonical NA NA 479 None 5 9 0 TRUE 0 0 NA A coding 562 1686 323 2008 PB.2874.2 chr4 + 1639 4 full-splice_match CXCL8 ENST00000307407.7 1705 4 63 3 no_subtype FALSE canonical NA NA 374 None 14 8 1 FALSE 0 0 NA C coding 99 297 91 387 PB.11176.1 chrX - 2779 4 incomplete-splice_match ARHGEF6 ENST00000370620.5 4764 21 1970 15 5prime_fragment FALSE canonical NA NA 16 None 2 12 0 FALSE 0 0 NA B coding 68 204 106 309 PB.7241.1 chr12 - 3469 20 novel_not_in_catalog GIT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 195 None 7 4 0 TRUE 0 0 NA C coding 729 2187 144 2330 PB.4683.2 chr7 - 3322 8 novel_not_in_catalog AKR1B1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 103 None 2 18 0 TRUE 0 0 NA C coding 172 516 2433 2948 PB.7241.3 chr12 - 3157 19 novel_not_in_catalog GIT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 195 None 2 17 3 TRUE 0 0 NA C coding 625 1875 144 2018 PB.7959.41 chr14 - 1536 6 fusion IGHA1,IGHV3-7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 117 None 5 18 3 TRUE 0 0 NA B coding 254 762 725 1486 PB.7241.5 chr12 - 3374 20 novel_not_in_catalog GIT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 160 None 2 5 0 TRUE 0 0 NA C coding 709 2127 109 2235 PB.7241.4 chr12 - 3044 18 novel_not_in_catalog GIT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 169 None 3 5 1 TRUE 0 0 NA C coding 596 1788 118 1905 PB.8704.1 chr16 - 2906 4 full-splice_match CHTF8 ENST00000448552.6 2903 4 -6 3 no_subtype FALSE canonical NA NA 93 None 164 6 0 FALSE 0 0 NA C coding 121 363 129 491 PB.7899.4 chr14 + 4389 21 full-splice_match PAPOLA ENST00000392990.6 2588 21 -115 -1686 no_subtype FALSE canonical NA NA 2229 None 19 10 0 FALSE 0 0 NA C coding 724 2172 151 2322 PB.1438.1 chr2 + 2731 1 antisense novelGene_SUCLG1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1388.1 chr2 + 2956 7 novel_not_in_catalog ETAA1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2676 None 6 7 0 TRUE 0 0 NA B coding 897 2691 111 2801 PB.9383.2 chr17 - 2474 17 novel_not_in_catalog SRP68 novel NA NA NA NA no_subtype TRUE canonical NA NA 62 None 5 4 1 TRUE 0 0 NA C coding 526 1578 301 1878 PB.7899.2 chr14 + 2918 10 novel_not_in_catalog PAPOLA novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1891 None 13 15 0 TRUE 0 0 NA C coding 285 855 165 1019 PB.7042.5 chr12 - 6151 29 full-splice_match BAZ2A ENST00000549884.5 6050 29 -115 14 no_subtype FALSE canonical NA NA 202 None 7 5 0 FALSE 0 0 NA C coding 1903 5709 205 5913 PB.7340.1 chr12 - 5668 24 novel_not_in_catalog CLIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 56 None 2 18 2 FALSE 0 0 NA C coding 1355 4065 163 4227 PB.5837.2 chr10 - 2905 9 novel_in_catalog DNAJB12 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 154 None 6 8 0 FALSE 0 0 NA C coding 377 1131 22 1152 PB.7340.3 chr12 - 5910 25 full-splice_match CLIP1 ENST00000358808.6 5880 25 -34 4 no_subtype FALSE canonical NA NA 83 None 3 16 1 FALSE 0 0 NA C coding 1427 4281 190 4470 PB.4683.1 chr7 - 1357 10 full-splice_match AKR1B1 ENST00000285930.8 1409 10 44 8 no_subtype FALSE canonical NA NA 102 None 71 2 0 FALSE 0 0 NA C coding 316 948 37 984 PB.7340.5 chr12 - 5770 24 full-splice_match CLIP1 ENST00000537178.5 5229 24 26 -567 no_subtype FALSE canonical NA NA 86 None 3 7 0 FALSE 0 0 NA C coding 1392 4176 193 4368 PB.7340.7 chr12 - 3049 14 incomplete-splice_match CLIP1 ENST00000537178.5 5229 24 22 2158 internal_fragment FALSE canonical NA NA 90 None 17 0 0 FALSE 0 0 NA C coding 951 2853 197 3049 PB.6908.1 chr12 + 1609 10 full-splice_match PPHLN1 ENST00000358314.11 1643 10 28 6 no_subtype FALSE canonical NA NA 974 None 5 5 0 FALSE 0 0 NA C coding 367 1101 66 1166 PB.4411.9 chr7 - 3156 23 novel_not_in_catalog MYO1G novel NA NA NA NA no_subtype FALSE canonical NA NA 22 None 2 0 0 TRUE 0 0 NA C coding 1018 3054 31 3084 PB.2931.2 chr4 + 2865 2 genic_intron novelGene_772 novel NA NA NA NA no_subtype FALSE canonical NA NA 2155 None 7 15 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.629.9 chr1 - 3022 7 novel_in_catalog TXNIP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 563 None 2 20 0 FALSE 0 0 NA C coding 395 1185 314 1498 PB.8440.2 chr16 - 2801 13 novel_not_in_catalog TXNDC11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 44 None 2 1 0 TRUE 0 0 NA A coding 759 2277 417 2693 PB.1963.4 chr2 - 2093 12 full-splice_match STK25 ENST00000316586.8 4619 12 177 2349 no_subtype FALSE canonical NA NA 73 None 2 3 0 FALSE 0 0 NA C coding 426 1278 174 1451 PB.3018.1 chr4 + 1600 2 novel_not_in_catalog SYNPO2 novel NA NA NA NA no_subtype FALSE canonical NA NA 223 None 3 7 0 FALSE 0 0 NA B coding 135 405 544 948 PB.629.5 chr1 - 2689 8 novel_not_in_catalog TXNIP novel NA NA NA NA no_subtype FALSE canonical NA NA 512 None 15 22 1 FALSE 0 0 NA C coding 384 1152 263 1414 PB.6908.3 chr12 + 1513 10 full-splice_match PPHLN1 ENST00000552761.5 1095 10 -2 -416 no_subtype FALSE canonical NA NA 868 None 5 7 0 FALSE 0 0 NA C coding 319 957 104 1060 PB.629.2 chr1 - 3245 1 novel_in_catalog TXNIP novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 16 29 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.629.1 chr1 - 1859 8 full-splice_match TXNIP ENST00000582401.5 2926 8 166 901 no_subtype FALSE canonical NA NA 418 None 1330 5 0 FALSE 0 0 NA C coding 391 1173 169 1341 PB.7042.1 chr12 - 6347 31 novel_not_in_catalog BAZ2A novel NA NA NA NA no_subtype FALSE canonical NA NA 201 None 2 7 0 FALSE 0 0 NA C coding 1903 5709 392 6100 PB.5370.1 chr9 - 2855 13 full-splice_match IPPK ENST00000287996.7 4401 13 163 1383 no_subtype FALSE canonical NA NA 195 None 6 5 1 FALSE 0 0 NA A coding 491 1473 115 1587 PB.1135.1 chr1 - 3722 17 novel_not_in_catalog ERO1B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 277 None 2 19 1 TRUE 0 0 NA A coding 467 1401 176 1576 PB.11102.2 chrX - 1483 5 full-splice_match PSMD10 ENST00000217958.7 1546 5 54 9 no_subtype FALSE canonical NA NA 158 None 13 4 0 FALSE 0 0 NA C coding 226 678 45 722 PB.9655.1 chr19 + 893 5 novel_in_catalog OAZ1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 627 None 42 1 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9655.2 chr19 + 900 5 novel_in_catalog OAZ1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 624 None 167 0 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9655.3 chr19 + 1385 3 full-splice_match OAZ1 ENST00000593012.1 1357 3 -23 -5 no_subtype FALSE canonical NA NA 789 None 2 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2627.1 chr3 - 1482 10 novel_not_in_catalog ALG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 172 None 3 4 2 TRUE 0 0 NA C coding 402 1206 92 1297 PB.4415.1 chr7 - 3356 3 novel_not_in_catalog TNS3 novel NA NA NA NA no_subtype FALSE canonical NA NA 126 None 5 19 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.4415.2 chr7 - 5905 17 novel_not_in_catalog TNS3 novel NA NA NA NA no_subtype FALSE canonical NA NA 943 None 2 20 1 TRUE 0 0 NA B coding 964 2892 106 2997 PB.10019.2 chr19 + 3173 29 full-splice_match ARHGEF1 ENST00000354532.7 3243 29 75 -5 no_subtype FALSE canonical NA NA 2829 None 57 1 0 FALSE 0 0 NA C coding 912 2736 74 2809 PB.10019.1 chr19 + 3346 31 novel_in_catalog ARHGEF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3002 None 178 2 0 FALSE 0 0 NA C coding 972 2916 67 2982 PB.5676.2 chr10 + 3009 1 genic_intron novelGene_82 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A coding 119 357 788 1144 PB.10019.6 chr19 + 3714 30 novel_in_catalog ARHGEF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3373 None 2 5 0 FALSE 0 0 NA C coding 571 1713 1641 3353 PB.10019.5 chr19 + 3399 31 novel_not_in_catalog ARHGEF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3060 None 32 1 0 FALSE 0 0 NA C coding 979 2937 104 3040 PB.1740.12 chr2 + 3136 20 novel_in_catalog COL3A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2027 None 5 4 0 FALSE 0 0 NA C coding 417 1251 226 1476 PB.5142.1 chr8 + 7392 24 novel_not_in_catalog DENND3 novel NA NA NA NA no_subtype FALSE canonical NA NA 6671 None 3 22 2 TRUE 0 0 NA B coding 1099 3297 123 3419 PB.1184.1 chr2 - 1546 6 full-splice_match YWHAQ ENST00000238081.7 2208 6 17 645 no_subtype FALSE canonical NA NA 57 None 80 1 0 FALSE 0 0 NA A coding 245 735 140 874 PB.10730.23 chr22 - 6751 40 incomplete-splice_match MYH9 ENST00000216181.9 7501 41 383 367 5prime_fragment FALSE canonical NA NA 181 None 6 7 1 FALSE 0 0 NA C coding 1886 5658 71 5728 PB.7167.1 chr12 - 3042 4 novel_not_in_catalog NR2C1 novel NA NA NA NA no_subtype TRUE canonical NA NA 175 None 2 31 2 TRUE 0 0 NA A coding 122 366 2043 2408 PB.10813.1 chr22 + 814 4 full-splice_match TSPO ENST00000337554.7 881 4 65 2 no_subtype FALSE canonical NA NA 376 None 11 4 0 FALSE 0 0 NA A coding 169 507 56 562 PB.4435.2 chr7 - 2445 11 novel_not_in_catalog GUSB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 218 None 2 5 1 TRUE 0 0 NA B coding 387 1161 9 1169 PB.4435.1 chr7 - 2162 13 novel_not_in_catalog GUSB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 229 None 11 5 1 TRUE 0 0 NA B coding 651 1953 20 1972 PB.8116.2 chr15 - 2854 16 full-splice_match ADAM10 ENST00000260408.7 11431 16 191 8386 no_subtype FALSE canonical NA NA 308 None 7 1 0 FALSE 0 0 NA A coding 674 2022 476 2497 PB.3326.1 chr5 + 1798 14 full-splice_match HEXB ENST00000261416.11 1901 14 100 3 no_subtype FALSE canonical NA NA 1630 None 106 6 0 FALSE 0 0 NA C coding 556 1668 18 1685 PB.752.1 chr1 + 2059 8 novel_not_in_catalog PRCC novel NA NA NA NA no_subtype FALSE canonical NA NA 1625 None 16 6 0 TRUE 0 0 NA A coding 491 1473 237 1709 PB.200.2 chr1 - 1476 9 full-splice_match DNAJC8 ENST00000263697.5 1759 9 0 283 no_subtype FALSE canonical NA NA 105 None 73 4 0 FALSE 0 0 NA A coding 253 759 28 786 PB.3326.2 chr5 + 2896 10 novel_in_catalog HEXB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1248 None 10 14 0 FALSE 0 0 NA C coding 449 1347 80 1426 PB.1207.1 chr2 + 2350 2 novel_not_in_catalog RHOB novel NA NA NA NA no_subtype FALSE canonical NA NA 81 None 4 11 1 FALSE 0 0 NA C coding 196 588 379 966 PB.1207.2 chr2 + 1327 1 full-splice_match RHOB ENST00000272233.5 2372 1 943 102 no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA C coding 88 264 37 300 PB.7871.6 chr14 + 3361 3 genic_intron novelGene_848 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 140 None 2 23 1 FALSE 0 0 NA B coding 126 378 1397 1774 PB.5660.1 chr10 + 3536 22 novel_not_in_catalog FBXO18 novel NA NA NA NA no_subtype TRUE canonical NA NA 3055 None 2 6 0 TRUE 0 0 NA A coding 1043 3129 95 3223 PB.7871.4 chr14 + 2768 1 novel_in_catalog RIN3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 8 10 0 FALSE 0 0 NA B coding 405 1215 516 1730 PB.1437.1 chr2 + 3298 8 novel_not_in_catalog HK2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3176 None 2 19 4 TRUE 0 0 NA B non_coding NA NA NA NA PB.7578.1 chr13 + 4257 30 novel_in_catalog MCF2L novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 3371 None 3 14 0 FALSE 0 0 NA A coding 1131 3393 62 3454 PB.7871.3 chr14 + 3444 8 novel_not_in_catalog RIN3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2391 None 18 9 0 TRUE 0 0 NA B coding 647 1941 775 2715 PB.7871.1 chr14 + 3791 11 novel_not_in_catalog RIN3 novel NA NA NA NA no_subtype TRUE canonical NA NA 2723 None 8 7 0 TRUE 0 0 NA B coding 985 2955 93 3047 PB.10777.4 chr22 + 2031 1 genic_intron novelGene_399 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.793.8 chr1 - 1733 7 full-splice_match SLAMF1 ENST00000302035.10 4006 7 263 2010 no_subtype FALSE canonical NA NA 163 None 19 5 0 FALSE 0 0 NA A coding 335 1005 88 1092 PB.10705.3 chr22 + 3029 1 incomplete-splice_match TUG1 ENST00000519077.3 5673 3 2635 10 no_subtype FALSE canonical NA NA NA None 12 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10705.2 chr22 + 3698 3 genic TUG1_3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2518 None 2 23 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.10705.1 chr22 + 2934 3 full-splice_match TUG1 ENST00000519077.3 5673 3 -598 3337 no_subtype FALSE canonical NA NA 2045 None 4 17 1 FALSE 0 0 NA C coding 135 405 1063 1467 PB.3014.1 chr4 + 5922 8 novel_not_in_catalog CEP170P1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1276 None 3 24 0 TRUE 0 0 NA A coding 345 1035 2092 3126 PB.7345.1 chr12 + 2524 9 novel_not_in_catalog DENR novel NA NA NA NA no_subtype FALSE canonical NA NA 774 None 5 13 0 TRUE 0 0 NA B coding 198 594 105 698 PB.6005.5 chr10 - 3289 18 full-splice_match NT5C2 ENST00000343289.9 3435 18 5 141 no_subtype FALSE canonical NA NA 66 None 3 16 0 FALSE 0 0 NA C coding 561 1683 91 1773 PB.7113.1 chr12 + 1834 11 full-splice_match RAB3IP ENST00000247833.11 3690 11 198 1658 no_subtype FALSE canonical NA NA 1478 None 2 2 0 FALSE 0 0 NA A coding 460 1380 179 1558 PB.4602.2 chr7 - 3226 24 novel_not_in_catalog SLC26A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 110 None 2 12 0 TRUE 0 0 NA C coding 764 2292 547 2838 PB.2069.1 chr3 + 3406 2 genic_intron novelGene_293 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3185 None 2 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2843.4 chr4 + 1887 15 full-splice_match FIP1L1 ENST00000306932.10 1878 15 -25 16 no_subtype FALSE canonical NA NA 1583 None 3 1 0 FALSE 0 0 NA C coding 520 1560 169 1728 PB.321.1 chr1 + 4209 20 incomplete-splice_match PTPRF ENST00000496447.5 5887 21 875 803 internal_fragment FALSE canonical NA NA 3280 None 8 4 0 FALSE 0 0 NA A coding 1082 3246 101 3346 PB.2843.2 chr4 + 1972 16 novel_in_catalog FIP1L1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1658 None 4 1 0 FALSE 0 0 NA C coding 535 1605 199 1803 PB.176.2 chr1 - 1361 5 full-splice_match GPN2 ENST00000374135.8 4678 5 63 3254 no_subtype FALSE canonical NA NA 549 None 10 0 0 FALSE 0 0 NA C coding 310 930 139 1068 PB.2843.1 chr4 + 1163 1 novel_in_catalog FIP1L1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5647.1 chr10 + 3749 15 novel_in_catalog ZMYND11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1740 None 2 8 0 FALSE 0 0 NA C coding 602 1806 55 1860 PB.5491.1 chr9 - 3124 2 genic_intron novelGene_1072 novel NA NA NA NA no_subtype FALSE canonical NA NA 2370 None 4 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.216.1 chr1 + 1496 7 incomplete-splice_match ZCCHC17 ENST00000344147.9 1605 8 81 28 internal_fragment FALSE canonical NA NA 619 None 9 6 0 FALSE 0 0 NA B coding 241 723 56 778 PB.5511.1 chr9 + 2702 8 full-splice_match PBX3 ENST00000342287.9 2755 8 48 5 no_subtype FALSE canonical NA NA 1160 None 2 5 0 FALSE 0 0 NA C coding 351 1053 62 1114 PB.3334.2 chr5 - 3346 3 novel_not_in_catalog F2RL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 214 None 4 14 1 TRUE 0 0 NA A coding 374 1122 151 1272 PB.216.2 chr1 + 1667 10 novel_not_in_catalog ZCCHC17 novel NA NA NA NA no_subtype FALSE canonical NA NA 770 None 2 7 0 TRUE 0 0 NA B coding 241 723 204 926 PB.9449.1 chr17 + 1808 13 full-splice_match GPS1 ENST00000578552.5 1874 13 59 7 no_subtype FALSE canonical NA NA 1397 None 49 1 0 FALSE 0 0 NA C coding 487 1461 9 1469 PB.4602.7 chr7 - 2862 21 novel_in_catalog SLC26A3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 99 None 123 9 0 FALSE 0 0 NA C coding 764 2292 188 2479 PB.9449.3 chr17 + 1897 14 novel_not_in_catalog GPS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1486 None 2 3 1 TRUE 0 0 NA C coding 291 873 686 1558 PB.9449.2 chr17 + 1836 13 full-splice_match GPS1 ENST00000306823.10 1842 13 -1 7 no_subtype TRUE canonical NA NA 1425 None 2 1 0 FALSE 0 0 NA C coding 491 1473 25 1497 PB.5966.4 chr10 - 4432 14 full-splice_match DNMBP ENST00000636706.1 5437 14 89 916 no_subtype FALSE canonical NA NA 1300 None 3 4 0 FALSE 0 0 NA C coding 1209 3627 145 3771 PB.4842.1 chr8 + 2835 2 novel_not_in_catalog DOCK5 novel NA NA NA NA no_subtype FALSE canonical NA NA 115 None 2 18 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.4409.1 chr7 + 750 5 full-splice_match PPIA ENST00000468812.5 2238 5 3 1485 no_subtype FALSE canonical NA NA 404 None 12 0 0 FALSE 0 0 NA A coding 165 495 43 537 PB.9548.1 chr18 + 2925 27 novel_not_in_catalog PIK3C3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2658 None 40 0 0 TRUE 0 0 NA A coding 887 2661 10 2670 PB.9305.19 chr17 - 3148 14 novel_in_catalog DDX5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 214 None 5 2 0 FALSE 0 0 NA C coding 406 1218 171 1388 PB.8124.2 chr15 - 1428 13 full-splice_match ANXA2 ENST00000451270.6 1435 13 -7 14 no_subtype FALSE canonical NA NA 108 None 131 2 0 FALSE 0 0 NA C coding 339 1017 120 1136 PB.8124.3 chr15 - 1694 14 novel_not_in_catalog ANXA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 32 None 2 2 0 FALSE 0 0 NA C coding 202 606 44 649 PB.8124.4 chr15 - 1401 13 novel_not_in_catalog ANXA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 78 None 2 2 0 FALSE 0 0 NA C coding 339 1017 90 1106 PB.3587.13 chr5 - 2784 19 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 175 None 11 5 1 TRUE 0 0 NA B coding 627 1881 212 2092 PB.8124.6 chr15 - 1477 13 novel_not_in_catalog ANXA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 155 None 2 3 1 FALSE 0 0 NA C coding 339 1017 167 1183 PB.8124.7 chr15 - 1837 13 novel_not_in_catalog ANXA2 novel NA NA NA NA no_subtype FALSE canonical NA NA 43 None 3 5 1 FALSE 0 0 NA C coding 219 657 55 711 PB.8099.1 chr15 + 1896 12 full-splice_match PIGB ENST00000164305.9 2172 12 269 7 no_subtype FALSE non_canonical NA NA 1540 None 5 4 0 FALSE 0 0 NA A coding 545 1635 50 1684 PB.4429.1 chr7 - 1845 2 antisense novelGene_ZNF107_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 180 None 8 11 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8099.2 chr15 - 3880 9 novel_in_catalog CCPG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 469 None 2 4 0 FALSE 0 0 NA C coding 807 2421 479 2899 PB.901.1 chr1 - 2604 8 full-splice_match STX6 ENST00000258301.5 4851 8 -5 2252 no_subtype FALSE canonical NA NA 278 None 3 8 0 FALSE 0 0 NA A coding 255 765 244 1008 PB.1555.2 chr2 + 1777 11 novel_not_in_catalog WASH2P novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1306 None 9 6 0 TRUE 0 0 NA B coding 266 798 640 1437 PB.4198.1 chr6 - 1833 12 full-splice_match RMND1 ENST00000367303.8 1854 12 -34 55 no_subtype FALSE canonical NA NA 143 None 10 6 0 FALSE 0 0 NA A coding 449 1347 158 1504 PB.2436.1 chr3 - 5555 2 genic_intron novelGene_1075 novel NA NA NA NA no_subtype FALSE canonical NA NA 1259 None 2 36 1 FALSE 0 0 NA A coding 100 300 1670 1969 PB.4602.9 chr7 - 2984 22 novel_not_in_catalog SLC26A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 110 None 10 9 0 FALSE 0 0 NA C coding 764 2292 310 2601 PB.6943.1 chr12 - 1648 5 full-splice_match RND1 ENST00000309739.5 1681 5 27 6 no_subtype FALSE canonical NA NA 224 None 2 3 0 FALSE 0 0 NA A coding 232 696 105 800 PB.1547.1 chr2 - 5621 11 novel_not_in_catalog ZC3H8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 194 None 2 32 2 TRUE 0 0 NA A coding 148 444 534 977 PB.8543.1 chr16 - 1654 6 full-splice_match CDIPT ENST00000219789.10 2353 6 695 4 no_subtype FALSE canonical NA NA 227 None 3 2 0 FALSE 0 0 NA A coding 213 639 185 823 PB.3455.4 chr5 + 3409 6 novel_not_in_catalog CDC42SE2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1389 None 3 27 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.4602.8 chr7 - 3333 24 novel_not_in_catalog SLC26A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 90 None 2 21 3 TRUE 0 0 NA C coding 764 2292 659 2950 PB.6595.2 chr11 + 1571 2 novel_not_in_catalog SRSF8 novel NA NA NA NA no_subtype FALSE canonical NA NA 724 None 2 4 0 FALSE 0 0 NA C coding 34 102 512 613 PB.4758.1 chr7 - 2734 1 genic_intron novelGene_1243 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9387.1 chr17 - 3577 19 novel_in_catalog RHBDF2 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 140 None 3 5 0 FALSE 0 0 NA B coding 827 2481 360 2840 PB.6863.1 chr12 - 1402 1 genic_intron novelGene_223 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1886.1 chr2 - 2634 12 full-splice_match WDFY1 ENST00000233055.8 4660 12 -97 2123 no_subtype FALSE canonical NA NA 337 None 32 7 0 FALSE 0 0 NA A coding 410 1230 201 1430 PB.748.1 chr1 - 1790 8 full-splice_match GPATCH4 ENST00000368232.8 1972 8 13 169 no_subtype FALSE canonical NA NA 62 None 2 7 0 FALSE 0 0 NA A coding 370 1110 121 1230 PB.8700.2 chr16 + 1578 6 novel_not_in_catalog CDH1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 307 None 2 13 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.931.1 chr1 - 2568 10 full-splice_match PTGS2 ENST00000367468.9 4514 10 6 1940 no_subtype FALSE canonical NA NA 183 None 2 4 0 FALSE 0 0 NA A coding 604 1812 132 1943 PB.5345.14 chr9 - 2601 17 novel_not_in_catalog HNRNPK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 38 None 2 9 1 TRUE 0 0 NA C coding 463 1389 149 1537 PB.5325.1 chr9 + 3021 1 antisense novelGene_C9orf40_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5345.16 chr9 - 2653 17 novel_not_in_catalog HNRNPK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 95 None 3 12 1 TRUE 0 0 NA C coding 463 1389 207 1595 PB.3354.1 chr5 + 1533 1 genic_intron novelGene_754 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8980.2 chr17 - 1839 5 novel_in_catalog AKAP10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 226 None 2 5 0 FALSE 0 0 NA C coding 328 984 205 1188 PB.9808.1 chr19 + 2619 9 novel_in_catalog NFIX novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 965 None 6 16 0 FALSE 0 0 NA A coding 156 468 475 942 PB.10802.9 chr22 - 2498 10 novel_not_in_catalog RRP7A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 79 None 24 25 3 TRUE 0 0 NA C coding 280 840 7 846 PB.8980.1 chr17 - 3310 15 full-splice_match AKAP10 ENST00000225737.10 4072 15 20 742 no_subtype FALSE canonical NA NA 226 None 7 10 0 FALSE 0 0 NA C coding 640 1920 205 2124 PB.911.1 chr1 + 5771 22 novel_not_in_catalog SMG7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3402 None 2 11 1 FALSE 0 0 NA C coding 802 2406 1108 3513 PB.2461.1 chr3 - 3828 5 genic RAB43 novel NA NA NA NA no_subtype TRUE canonical NA NA 3550 None 2 27 3 TRUE 0 0 NA C coding 110 330 349 678 PB.10802.4 chr22 - 3007 6 full-splice_match NFAM1 ENST00000329021.9 5602 6 36 2559 no_subtype FALSE canonical NA NA 123 None 4 20 0 FALSE 0 0 NA A coding 270 810 3 812 PB.404.1 chr1 - 1525 1 genic_intron novelGene_594 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4149.1 chr6 - 3004 1 genic_intron novelGene_1169 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10802.1 chr22 - 2680 14 novel_not_in_catalog RRP7A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 95 None 4 23 6 TRUE 0 0 NA C coding 280 840 23 862 PB.8635.2 chr16 + 1383 1 incomplete-splice_match CCL22 ENST00000219235.4 2929 3 1545 2 no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA C coding 152 456 15 470 PB.11032.1 chrX - 2560 1 genic_intron novelGene_695 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8373.1 chr16 + 1683 1 full-splice_match FAHD1 ENST00000427358.3 1974 1 282 9 no_subtype FALSE canonical NA NA NA None 23 7 0 FALSE 0 0 NA A coding 221 663 17 679 PB.872.1 chr1 + 3210 17 full-splice_match DARS2 ENST00000361951.4 3506 17 170 126 no_subtype FALSE canonical NA NA 2307 None 11 12 0 FALSE 0 0 NA A coding 645 1935 558 2492 PB.5657.1 chr10 + 6405 15 novel_not_in_catalog FAM208B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5695 None 4 20 7 TRUE 0 0 NA A coding 780 2340 3357 5696 PB.6589.1 chr11 - 1524 2 novel_in_catalog SMCO4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 115 None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.708.1 chr1 - 1232 6 novel_not_in_catalog PMVK novel NA NA NA NA no_subtype FALSE canonical NA NA 362 None 2 4 0 TRUE 0 0 NA A coding 192 576 268 843 PB.7503.5 chr13 + 1871 1 incomplete-splice_match WDFY2 ENST00000298125.6 9321 12 6534 917 no_subtype FALSE canonical NA NA NA None 9 13 0 FALSE 0 0 NA B coding 117 351 101 451 PB.8228.1 chr15 - 2672 20 novel_in_catalog SCAPER novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 66 None 4 2 1 FALSE 0 0 NA B coding 869 2607 64 2670 PB.2023.2 chr3 - 1549 3 novel_not_in_catalog FGD5-AS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 130 None 2 17 1 TRUE 0 0 NA A coding 84 252 89 340 PB.7503.3 chr13 + 3433 2 novel_not_in_catalog WDFY2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1793 None 2 23 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.5480.6 chr9 + 1767 1 genic_intron novelGene_1057 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8468.1 chr16 - 5761 1 novel_in_catalog XYLT1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 31 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.11174.2 chrX + 2963 9 full-splice_match HTATSF1 ENST00000218364.4 2775 9 81 -269 no_subtype FALSE canonical NA NA 1155 None 45 2 0 FALSE 0 0 NA C coding 755 2265 94 2358 PB.4511.3 chr7 + 5905 3 antisense novelGene_SAMD9_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5836 None 2 6 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.11189.1 chrX + 3477 5 full-splice_match HMGB3 ENST00000325307.11 3560 5 72 11 no_subtype FALSE canonical NA NA 489 None 7 25 0 FALSE 0 0 NA A coding 200 600 25 624 PB.6931.1 chr12 - 4231 26 full-splice_match HDAC7 ENST00000080059.11 4095 26 -142 6 no_subtype TRUE canonical NA NA 161 None 12 8 0 FALSE 0 0 NA C coding 991 2973 143 3115 PB.6931.2 chr12 - 4069 25 full-splice_match HDAC7 ENST00000354334.7 4065 25 -13 9 no_subtype FALSE canonical NA NA 113 None 14 8 0 FALSE 0 0 NA C coding 954 2862 95 2956 PB.7175.1 chr12 + 3983 5 full-splice_match ELK3 ENST00000228741.7 4205 5 199 23 no_subtype FALSE canonical NA NA 1252 None 4 38 0 FALSE 0 0 NA A coding 407 1221 128 1348 PB.3303.2 chr5 + 3080 17 novel_not_in_catalog SLC30A5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2272 None 3 5 0 TRUE 0 0 NA B coding 765 2295 146 2440 PB.9800.1 chr19 + 1482 1 full-splice_match JUNB ENST00000302754.5 1820 1 323 15 no_subtype FALSE canonical NA NA NA None 87 2 0 FALSE 0 0 NA C coding 199 597 398 994 PB.3303.1 chr5 + 3904 17 novel_not_in_catalog SLC30A5 novel NA NA NA NA no_subtype TRUE canonical NA NA 2288 None 7 12 0 TRUE 0 0 NA B coding 765 2295 162 2456 PB.8846.1 chr17 - 2862 7 full-splice_match SHPK ENST00000225519.3 3838 7 48 928 no_subtype FALSE canonical NA NA 223 None 8 11 1 FALSE 0 0 NA A coding 478 1434 56 1489 PB.9268.1 chr17 + 3212 4 full-splice_match SMG8 ENST00000300917.9 3263 4 32 19 no_subtype FALSE canonical NA NA 2788 None 22 1 0 FALSE 0 0 NA A coding 991 2973 11 2983 PB.7694.1 chr14 + 2614 2 genic_intron novelGene_507 novel NA NA NA NA no_subtype FALSE canonical NA NA 1408 None 2 26 1 FALSE 0 0 NA A coding 105 315 24 338 PB.10322.1 chr20 + 5829 6 novel_not_in_catalog ASXL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 4431 None 2 20 1 TRUE 0 0 NA A coding 1209 3627 248 3874 PB.713.1 chr1 + 774 3 full-splice_match CKS1B ENST00000308987.5 759 3 -18 3 no_subtype FALSE canonical NA NA 252 None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2358.1 chr3 - 1666 2 novel_not_in_catalog CD47 novel NA NA NA NA no_subtype TRUE canonical NA NA 382 None 24 12 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.5537.1 chr9 - 2769 18 novel_in_catalog CIZ1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 112 None 16 11 1 FALSE 0 0 NA B coding 842 2526 118 2643 PB.7545.1 chr13 + 1315 12 novel_not_in_catalog DNAJC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1246 None 2 0 0 TRUE 0 0 NA B coding 425 1275 39 1313 PB.4120.4 chr6 - 2836 1 genic_intron novelGene_1106 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.897.3 chr1 + 2731 13 novel_not_in_catalog QSOX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2032 None 4 12 0 FALSE 0 0 NA C coding 669 2007 32 2038 PB.8862.8 chr17 + 2885 12 novel_in_catalog ARRB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2335 None 2 12 0 FALSE 0 0 NA C coding 152 456 89 544 PB.10717.2 chr22 - 1712 10 novel_not_in_catalog RTCB novel NA NA NA NA no_subtype FALSE canonical NA NA 26 None 2 1 0 FALSE 0 0 NA C coding 431 1293 9 1301 PB.10717.1 chr22 - 2004 12 full-splice_match RTCB ENST00000216038.5 2027 12 15 8 no_subtype FALSE canonical NA NA 177 None 40 1 0 FALSE 0 0 NA C coding 505 1515 85 1599 PB.8862.2 chr17 + 1761 14 novel_not_in_catalog ARRB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1211 None 12 9 1 TRUE 0 0 NA C coding 217 651 652 1302 PB.8862.1 chr17 + 1733 14 novel_not_in_catalog ARRB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1182 None 75 8 1 TRUE 0 0 NA C coding 217 651 623 1273 PB.897.1 chr1 + 3075 12 full-splice_match QSOX1 ENST00000367602.7 9311 12 237 5999 no_subtype FALSE canonical NA NA 1305 None 44 6 0 FALSE 0 0 NA C coding 495 1485 594 2078 PB.5980.1 chr10 + 6071 15 full-splice_match BTRC ENST00000370187.7 6134 15 51 12 no_subtype FALSE canonical NA NA 1916 None 7 36 0 FALSE 0 0 NA A coding 605 1815 68 1882 PB.4007.1 chr6 + 2649 1 antisense novelGene_FAM46A_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8862.5 chr17 + 1740 14 novel_not_in_catalog ARRB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1189 None 5 6 1 TRUE 0 0 NA C coding 397 1191 90 1280 PB.8862.4 chr17 + 1726 15 full-splice_match ARRB2 ENST00000269260.6 1895 15 194 -25 no_subtype FALSE canonical NA NA 1175 None 52 6 1 FALSE 0 0 NA C coding 409 1227 40 1266 PB.9836.2 chr19 - 1717 9 full-splice_match BRD4 ENST00000594841.5 1821 9 8 96 no_subtype FALSE canonical NA NA 63 None 9 0 0 FALSE 0 0 NA C coding 515 1545 173 1717 PB.7773.8 chr14 - 7146 31 novel_not_in_catalog ZFYVE26 novel NA NA NA NA no_subtype FALSE canonical NA NA 16 None 4 9 0 TRUE 0 0 NA B coding 1733 5199 34 5232 PB.9836.4 chr19 - 2880 1 genic_intron novelGene_128 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 12 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5714.10 chr10 + 1695 1 genic APBB1IP novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7773.7 chr14 - 6087 24 novel_not_in_catalog ZFYVE26 novel NA NA NA NA no_subtype FALSE canonical NA NA 216 None 2 16 2 TRUE 0 0 NA B coding 761 2283 138 2420 PB.7773.6 chr14 - 6061 25 novel_not_in_catalog ZFYVE26 novel NA NA NA NA no_subtype FALSE canonical NA NA 53 None 3 7 0 TRUE 0 0 NA B coding 989 2967 1181 4147 PB.689.1 chr1 + 2748 5 novel_not_in_catalog CHTOP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2346 None 2 16 0 TRUE 0 0 NA C coding 177 531 2019 2549 PB.2591.5 chr3 + 2700 1 genic_intron novelGene_1319 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 10 35 0 FALSE 0 0 NA B coding 117 351 1895 2245 PB.2591.2 chr3 + 3776 5 novel_not_in_catalog FNDC3B novel NA NA NA NA no_subtype FALSE canonical NA NA 1561 None 2 33 1 TRUE 0 0 NA C coding 115 345 167 511 PB.2591.3 chr3 + 3941 26 full-splice_match FNDC3B ENST00000415807.6 5083 26 44 1098 no_subtype TRUE canonical NA NA 3431 None 2 2 0 FALSE 0 0 NA C coding 1200 3600 141 3740 PB.2591.1 chr3 + 4297 3 novel_in_catalog FNDC3B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 284 None 3 31 0 FALSE 0 0 NA C coding 100 300 697 996 PB.11000.1 chrX + 2793 1 full-splice_match UBQLN2 ENST00000338222.6 4230 1 485 952 no_subtype FALSE canonical NA NA NA None 92 2 0 FALSE 0 0 NA A coding 454 1362 261 1622 PB.4826.2 chr8 + 1614 2 genic_intron novelGene_207 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 355 None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4826.1 chr8 + 1707 5 novel_not_in_catalog PPP3CC novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1158 None 2 11 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.6653.3 chr11 + 2669 1 novel_in_catalog REXO2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C coding 113 339 39 377 PB.3844.7 chr6 + 1356 6 novel_in_catalog HSD17B8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1166 None 3 2 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6653.1 chr11 + 1665 6 novel_in_catalog REXO2 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 1235 None 2 5 0 FALSE 0 0 NA C coding 147 441 922 1362 PB.3844.5 chr6 + 3274 16 fusion HSD17B8,SLC39A7 novel NA NA NA NA no_subtype FALSE canonical NA NA 3084 None 2 9 1 TRUE 0 0 NA B coding 117 351 940 1290 PB.3844.2 chr6 + 2055 9 novel_not_in_catalog SLC39A7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1680 None 10 8 1 TRUE 0 0 NA B coding 469 1407 45 1451 PB.3844.3 chr6 + 3428 16 fusion HSD17B8,SLC39A7 novel NA NA NA NA no_subtype FALSE canonical NA NA 3245 None 4 10 1 TRUE 0 0 NA B coding 469 1407 45 1451 PB.6653.5 chr11 + 2899 5 full-splice_match REXO2 ENST00000541703.5 475 5 -1 -2423 no_subtype FALSE canonical NA NA 449 None 2 13 0 FALSE 0 0 NA C coding 121 363 32 394 PB.3844.1 chr6 + 2394 8 novel_not_in_catalog SLC39A7 novel NA NA NA NA no_subtype FALSE canonical NA NA 2013 None 2 8 1 TRUE 0 0 NA B coding 469 1407 378 1784 PB.4020.1 chr6 - 3116 29 novel_not_in_catalog SNX14 novel NA NA NA NA no_subtype TRUE canonical NA NA 275 None 8 2 0 TRUE 0 0 NA B coding 930 2790 157 2946 PB.5139.3 chr8 - 4114 24 novel_not_in_catalog TRAPPC9 novel NA NA NA NA no_subtype FALSE canonical NA NA 115 None 2 10 1 TRUE 0 0 NA B coding 1091 3273 126 3398 PB.6172.2 chr11 - 3029 14 novel_not_in_catalog APBB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 87 None 2 8 0 TRUE 0 0 NA B coding 463 1389 102 1490 PB.6172.1 chr11 - 2630 15 novel_not_in_catalog APBB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 83 None 47 5 0 TRUE 0 0 NA B coding 708 2124 98 2221 PB.549.1 chr1 + 3643 9 full-splice_match CSF1 ENST00000329608.10 4210 9 216 351 no_subtype FALSE canonical NA NA 1853 None 2 8 0 FALSE 0 0 NA A coding 554 1662 176 1837 PB.10404.1 chr20 - 1785 6 novel_in_catalog TOMM34 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 246 None 2 5 0 FALSE 0 0 NA C coding 190 570 120 689 PB.2258.1 chr3 + 5656 23 novel_not_in_catalog APPL1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5116 None 11 24 0 TRUE 0 0 NA B coding 709 2127 72 2198 PB.2258.2 chr3 + 1924 21 incomplete-splice_match APPL1 ENST00000288266.7 6058 22 130 4004 3prime_fragment FALSE canonical NA NA 1910 None 2 1 0 FALSE 0 0 NA B coding 635 1905 18 1922 PB.10404.2 chr20 - 1924 7 full-splice_match TOMM34 ENST00000372813.3 2062 7 43 95 no_subtype FALSE canonical NA NA 237 None 2 2 0 FALSE 0 0 NA C coding 309 927 111 1037 PB.11061.1 chrX + 3073 3 genic RP11-346E8.1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1591 None 7 10 0 FALSE 0 0 NA A coding 104 312 185 496 PB.8834.1 chr17 + 1474 8 full-splice_match SERPINF1 ENST00000254722.8 1548 8 59 15 no_subtype FALSE canonical NA NA 1101 None 17 4 0 FALSE 0 0 NA A coding 418 1254 105 1358 PB.4513.8 chr7 - 5675 5 novel_not_in_catalog SAMD9L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 142 None 3 11 1 TRUE 0 0 NA B coding 1584 4752 612 5363 PB.4618.1 chr7 + 2697 2 genic_intron novelGene_1014 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1827 None 4 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4572.5 chr7 + 2839 1 incomplete-splice_match CUX1 ENST00000292535.11 13747 24 8058 2851 no_subtype FALSE canonical NA NA NA None 4 12 0 FALSE 0 0 NA B coding 145 435 1349 1783 PB.4572.4 chr7 + 2738 24 novel_not_in_catalog CUX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1802 None 2 5 0 TRUE 0 0 NA B coding 615 1845 25 1869 PB.10463.1 chr20 + 2237 6 full-splice_match VAPB ENST00000475243.5 7936 6 137 5562 no_subtype FALSE canonical NA NA 774 None 6 4 0 FALSE 0 0 NA C coding 243 729 202 930 PB.4572.6 chr7 + 2831 1 genic CUX1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA B coding 110 330 202 531 PB.3411.1 chr5 + 1658 1 novel_in_catalog WDR36 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4572.3 chr7 + 2925 24 novel_not_in_catalog CUX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1990 None 70 2 0 TRUE 0 0 NA B coding 678 2034 24 2057 PB.4572.2 chr7 + 2880 24 novel_not_in_catalog CUX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1944 None 2 4 2 TRUE 0 0 NA B coding 407 1221 43 1263 PB.689.3 chr1 + 1210 6 full-splice_match CHTOP ENST00000368694.7 2096 6 44 842 no_subtype FALSE canonical NA NA 809 None 4 1 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7426.2 chr13 - 3018 5 full-splice_match N4BP2L1 ENST00000380139.8 2994 5 -32 8 no_subtype FALSE canonical NA NA 262 None 2 25 1 FALSE 0 0 NA C coding 173 519 84 602 PB.9912.1 chr19 - 1057 2 full-splice_match UQCRFS1 ENST00000304863.5 3475 2 390 2028 no_subtype FALSE canonical NA NA 247 None 33 3 0 FALSE 0 0 NA A coding 274 822 34 855 PB.7426.1 chr13 - 2991 5 full-splice_match N4BP2L1 ENST00000380130.6 3046 5 49 6 no_subtype FALSE canonical NA NA 226 None 5 17 0 FALSE 0 0 NA C coding 243 729 48 776 PB.7930.6 chr14 - 2864 11 full-splice_match HSP90AA1 ENST00000216281.12 3379 11 197 318 no_subtype FALSE canonical NA NA 9 None 3 6 0 FALSE 0 0 NA C coding 732 2196 10 2205 PB.9574.1 chr18 - 1138 8 full-splice_match TXNL1 ENST00000217515.10 6894 8 65 5691 no_subtype FALSE canonical NA NA 238 None 18 1 0 FALSE 0 0 NA A coding 289 867 141 1007 PB.7930.4 chr14 - 2830 10 incomplete-splice_match HSP90AA1 ENST00000216281.12 3379 11 231 318 5prime_fragment FALSE canonical NA NA 137 None 14 6 0 FALSE 0 0 NA C coding 721 2163 9 2171 PB.6366.2 chr11 + 5787 21 novel_not_in_catalog DAGLA novel NA NA NA NA no_subtype TRUE canonical NA NA 2319 None 5 15 0 TRUE 0 0 NA C coding 1042 3126 149 3274 PB.7930.8 chr14 - 1672 9 incomplete-splice_match HSP90AA1 ENST00000216281.12 3379 11 197 1510 internal_fragment FALSE canonical NA NA 9 None 3 1 0 FALSE 0 0 NA C coding 554 1662 10 1671 PB.9215.1 chr17 + 1455 8 full-splice_match ABI3 ENST00000225941.5 2109 8 486 168 no_subtype FALSE canonical NA NA 949 None 70 0 0 FALSE 0 0 NA A coding 366 1098 13 1110 PB.8575.2 chr16 + 1804 16 novel_not_in_catalog FUS novel NA NA NA NA no_subtype TRUE canonical NA NA 1602 None 48 7 1 TRUE 0 0 NA A coding 509 1527 113 1639 PB.9326.2 chr17 - 3041 3 novel_in_catalog WIPI1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 130 None 2 21 0 FALSE 0 0 NA C coding 146 438 51 488 PB.9326.1 chr17 - 1902 13 full-splice_match WIPI1 ENST00000262139.9 1832 13 -72 2 no_subtype FALSE canonical NA NA 152 None 6 4 0 FALSE 0 0 NA C coding 446 1338 73 1410 PB.7567.1 chr13 - 3966 3 full-splice_match LIG4 ENST00000442234.5 3982 3 6 10 no_subtype FALSE canonical NA NA 45 None 6 13 0 FALSE 0 0 NA A coding 911 2733 147 2879 PB.4513.3 chr7 - 5695 5 novel_not_in_catalog SAMD9L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 187 None 81 9 1 TRUE 0 0 NA B coding 1584 4752 639 5390 PB.5996.1 chr10 + 3036 6 full-splice_match TRIM8 ENST00000302424.11 2831 6 576 -781 no_subtype FALSE canonical NA NA 594 None 6 13 0 FALSE 0 0 NA A coding 360 1080 120 1199 PB.10299.1 chr20 + 4006 6 full-splice_match GZF1 ENST00000338121.9 4835 6 12 817 no_subtype FALSE canonical NA NA 1850 None 14 19 0 FALSE 0 0 NA A coding 711 2133 66 2198 PB.8916.1 chr17 - 1828 1 full-splice_match BORCS6 ENST00000389017.5 2575 1 731 16 no_subtype FALSE canonical NA NA NA None 16 5 0 FALSE 0 0 NA A coding 357 1071 37 1107 PB.3964.3 chr6 + 1713 2 full-splice_match PAQR8 ENST00000442253.2 4738 2 44 2981 no_subtype FALSE canonical NA NA 78 None 2 2 0 FALSE 0 0 NA C coding 354 1062 131 1192 PB.1005.1 chr1 - 5374 1 genic_intron novelGene_1385 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 39 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2926.1 chr4 + 1698 1 genic_intron novelGene_765 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2633.1 chr3 - 1613 1 full-splice_match MAGEF1 ENST00000317897.4 1636 1 20 3 no_subtype FALSE canonical NA NA NA None 9 5 0 FALSE 0 0 NA A coding 307 921 162 1082 PB.6539.1 chr11 + 3552 16 novel_not_in_catalog UVRAG novel NA NA NA NA no_subtype FALSE canonical NA NA 1614 None 9 9 1 TRUE 0 0 NA B coding 699 2097 218 2314 PB.4554.6 chr7 - 2078 3 full-splice_match TSC22D4 ENST00000493217.1 2060 3 -31 13 no_subtype FALSE canonical NA NA 407 None 2 3 0 FALSE 0 0 NA C coding 310 930 677 1606 PB.3144.5 chr4 - 2735 12 novel_not_in_catalog CASP3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 100 None 2 27 5 TRUE 0 0 NA B coding 277 831 339 1169 PB.9440.1 chr17 - 1833 6 full-splice_match ARHGDIA ENST00000269321.11 1906 6 64 9 no_subtype FALSE canonical NA NA 45 None 321 6 0 FALSE 0 0 NA C coding 204 612 73 684 PB.381.1 chr1 + 2802 2 novel_in_catalog TCEANC2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 145 None 2 16 0 FALSE 0 0 NA C coding 53 159 188 346 PB.381.2 chr1 + 1624 5 full-splice_match TCEANC2 ENST00000234827.5 10436 5 14 8798 no_subtype FALSE canonical NA NA 624 None 2 3 0 FALSE 0 0 NA C coding 208 624 187 810 PB.3088.1 chr4 + 2685 2 novel_in_catalog RP11-18H21.1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 434 None 5 10 0 FALSE 0 0 NA A coding 121 363 410 772 PB.5072.1 chr8 - 5490 4 novel_in_catalog TRPS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 429 None 4 19 0 FALSE 0 0 NA A coding 893 2679 432 3110 PB.9410.11 chr17 + 1549 1 antisense novelGene_CYTH1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5610.4 chr9 - 1647 10 novel_not_in_catalog BRD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 76 None 2 3 0 TRUE 0 0 NA B coding 486 1458 190 1647 PB.2270.4 chr3 + 2781 18 novel_not_in_catalog PXK novel NA NA NA NA no_subtype FALSE canonical NA NA 1517 None 4 7 0 TRUE 0 0 NA B coding 557 1671 53 1723 PB.2270.2 chr3 + 2706 18 novel_not_in_catalog PXK novel NA NA NA NA no_subtype FALSE canonical NA NA 1441 None 2 7 0 TRUE 0 0 NA B coding 441 1323 325 1647 PB.2270.3 chr3 + 2752 17 novel_not_in_catalog PXK novel NA NA NA NA no_subtype FALSE canonical NA NA 1489 None 3 8 0 TRUE 0 0 NA B coding 499 1497 95 1591 PB.2270.1 chr3 + 2830 19 novel_not_in_catalog PXK novel NA NA NA NA no_subtype FALSE canonical NA NA 1566 None 65 6 0 TRUE 0 0 NA B coding 578 1734 39 1772 PB.5016.1 chr8 + 3713 16 full-splice_match ESRP1 ENST00000358397.9 3756 16 40 3 no_subtype FALSE canonical NA NA 2174 None 18 6 0 FALSE 0 0 NA A coding 677 2031 106 2136 PB.4967.6 chr8 - 2627 1 novel_in_catalog TRAM1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 25 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4967.5 chr8 - 1697 2 novel_in_catalog TRAM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1430 None 5 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4226.2 chr6 - 1231 1 novel_in_catalog DYNLT1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4967.3 chr8 - 2638 10 novel_in_catalog TRAM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 273 None 2 7 1 FALSE 0 0 NA C coding 278 834 317 1150 PB.4967.2 chr8 - 2571 11 novel_not_in_catalog TRAM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 85 None 5 5 0 FALSE 0 0 NA C coding 274 822 263 1084 PB.4967.1 chr8 - 1413 11 full-splice_match TRAM1 ENST00000262213.6 2785 11 -15 1387 no_subtype FALSE canonical NA NA 308 None 468 2 0 FALSE 0 0 NA C coding 374 1122 186 1307 PB.5992.1 chr10 + 2742 9 novel_not_in_catalog MFSD13A novel NA NA NA NA no_subtype TRUE canonical NA NA 1421 None 4 7 1 FALSE 0 0 NA A coding 500 1500 182 1681 PB.3218.3 chr5 - 3144 14 full-splice_match DAB2 ENST00000545653.5 4537 14 35 1358 no_subtype FALSE canonical NA NA 395 None 2 1 0 FALSE 0 0 NA C coding 749 2247 497 2743 PB.1279.3 chr2 - 5908 18 novel_in_catalog PRKD3 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 216 None 2 24 0 FALSE 0 0 NA B coding 857 2571 872 3442 PB.3218.1 chr5 - 1394 1 incomplete-splice_match DAB2 ENST00000339788.10 3690 14 2289 8 no_subtype FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1279.1 chr2 - 3684 19 novel_in_catalog PRKD3 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 128 None 28 7 0 FALSE 0 0 NA B coding 890 2670 784 3453 PB.6959.6 chr12 + 2883 10 full-splice_match TMBIM6 ENST00000423828.5 3254 10 367 4 no_subtype FALSE canonical NA NA 825 None 7 15 0 FALSE 0 0 NA C coding 237 711 136 846 PB.6959.7 chr12 + 2984 11 novel_in_catalog TMBIM6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 924 None 7 15 2 FALSE 0 0 NA C coding 237 711 235 945 PB.3218.5 chr5 - 1547 9 novel_in_catalog DAB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 190 None 2 2 0 FALSE 0 0 NA C coding 234 702 292 993 PB.3218.4 chr5 - 2937 10 novel_not_in_catalog DAB2 novel NA NA NA NA no_subtype FALSE canonical NA NA 65 None 8 16 1 TRUE 0 0 NA C coding 234 702 167 868 PB.9435.1 chr17 + 2825 22 full-splice_match HGS ENST00000329138.8 2970 22 139 6 no_subtype FALSE canonical NA NA 2219 None 229 6 0 FALSE 0 0 NA C coding 710 2130 198 2327 PB.6959.8 chr12 + 3461 13 novel_not_in_catalog TMBIM6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2977 None 2 21 3 TRUE 0 0 NA C coding 295 885 581 1465 PB.6959.9 chr12 + 2965 11 novel_not_in_catalog TMBIM6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 906 None 3 17 1 TRUE 0 0 NA C coding 237 711 217 927 PB.9435.4 chr17 + 2830 21 novel_in_catalog HGS novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2218 None 2 7 0 FALSE 0 0 NA C coding 757 2271 56 2326 PB.82.2 chr1 - 1343 2 novel_in_catalog ZBTB17 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 119 None 3 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.82.1 chr1 - 2707 16 full-splice_match ZBTB17 ENST00000375743.8 2745 16 33 5 no_subtype FALSE canonical NA NA 111 None 26 8 2 FALSE 0 0 NA C coding 803 2409 201 2609 PB.1844.1 chr2 + 1898 16 full-splice_match ATIC ENST00000236959.13 2213 16 313 2 no_subtype FALSE canonical NA NA 1672 None 11 4 1 FALSE 0 0 NA A coding 592 1776 14 1789 PB.2148.1 chr3 + 3538 2 novel_not_in_catalog CCR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 67 None 61 11 0 FALSE 0 0 NA B coding 360 1080 114 1193 PB.6472.8 chr11 + 3501 10 full-splice_match KDM2A ENST00000530342.2 3651 10 121 29 no_subtype FALSE canonical NA NA 2030 None 60 1 0 FALSE 0 0 NA C coding 723 2169 41 2209 PB.6472.9 chr11 + 5673 8 novel_not_in_catalog KDM2A novel NA NA NA NA no_subtype TRUE canonical NA NA 4198 None 2 20 1 TRUE 0 0 NA C coding 396 1188 2218 3405 PB.4019.1 chr6 + 3508 9 full-splice_match NT5E ENST00000257770.7 3548 9 41 -1 no_subtype FALSE canonical NA NA 1569 None 7 14 0 FALSE 0 0 NA A coding 574 1722 9 1730 PB.2420.3 chr3 + 2758 1 novel_in_catalog CD86 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 11 0 FALSE 0 0 NA B coding 101 303 241 543 PB.9326.3 chr17 - 1700 1 novel_in_catalog WIPI1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C coding 185 555 593 1147 PB.6472.2 chr11 + 1560 2 genic_intron novelGene_631 novel NA NA NA NA no_subtype TRUE canonical NA NA 120 None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6472.1 chr11 + 5977 19 incomplete-splice_match KDM2A ENST00000529006.6 6967 21 572 418 internal_fragment FALSE canonical NA NA 3181 None 3 5 0 FALSE 0 0 NA C coding 1106 3318 43 3360 PB.1136.2 chr1 + 1596 1 incomplete-splice_match LGALS8 ENST00000416919.6 6097 10 3946 556 no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6472.7 chr11 + 2636 1 novel_in_catalog KDM2A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C coding 138 414 778 1191 PB.1136.1 chr1 + 3753 10 full-splice_match LGALS8 ENST00000366584.8 4369 10 443 173 no_subtype FALSE canonical NA NA 927 None 15 29 1 FALSE 0 0 NA C coding 316 948 127 1074 PB.4118.1 chr6 - 3834 6 full-splice_match THEMIS ENST00000368248.4 3866 6 23 9 no_subtype FALSE canonical NA NA 217 None 8 8 0 FALSE 0 0 NA A coding 641 1923 127 2049 PB.517.5 chr1 + 2757 2 genic_intron novelGene_913 novel NA NA NA NA no_subtype FALSE canonical NA NA 2683 None 2 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9187.1 chr17 + 1549 7 novel_in_catalog NSFP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 578 None 2 4 0 FALSE 0 0 NA A coding 311 933 5 937 PB.527.1 chr1 - 2813 10 full-splice_match VAV3 ENST00000415432.6 1293 10 0 -1520 no_subtype FALSE canonical NA NA 124 None 72 12 0 FALSE 0 0 NA A coding 287 861 74 934 PB.3998.2 chr6 + 4266 24 novel_in_catalog SENP6 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 3758 None 3 2 0 FALSE 0 0 NA A coding 1111 3333 633 3965 PB.4146.1 chr6 + 3183 15 full-splice_match MYB ENST00000367814.8 3302 15 105 14 no_subtype FALSE canonical NA NA 1887 None 8 8 0 FALSE 0 0 NA A coding 640 1920 82 2001 PB.1565.2 chr2 + 2916 1 novel_in_catalog TMEM177 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA C coding 403 1209 1377 2585 PB.9310.1 chr17 - 3820 4 full-splice_match GNA13 ENST00000439174.6 4922 4 143 959 no_subtype TRUE canonical NA NA 386 None 19 18 0 FALSE 0 0 NA C coding 377 1131 104 1234 PB.9310.2 chr17 - 2671 1 incomplete-splice_match GNA13 ENST00000439174.6 4922 4 2231 21 no_subtype FALSE canonical NA NA NA None 5 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6245.1 chr11 - 2911 1 full-splice_match HSP90AA2P ENST00000530115.1 2196 1 -58 -657 no_subtype FALSE canonical NA NA NA None 4 7 0 FALSE 0 0 NA A coding 343 1029 59 1087 PB.2551.5 chr3 - 3869 10 novel_in_catalog CCNL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 356 None 2 10 0 FALSE 0 0 NA C coding 299 897 2530 3426 PB.10632.1 chr22 + 2561 3 antisense novelGene_C22orf29_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2375 None 2 17 2 FALSE 0 0 NA A coding 125 375 722 1096 PB.1019.4 chr1 + 3174 13 novel_not_in_catalog CD46 novel NA NA NA NA no_subtype FALSE canonical NA NA 1182 None 33 26 1 TRUE 0 0 NA B coding 384 1152 101 1252 PB.1019.5 chr1 + 2954 12 novel_not_in_catalog CD46 novel NA NA NA NA no_subtype FALSE canonical NA NA 969 None 2 14 0 TRUE 0 0 NA B coding 339 1017 23 1039 PB.1019.2 chr1 + 3078 13 novel_not_in_catalog CD46 novel NA NA NA NA no_subtype FALSE canonical NA NA 1085 None 41 14 0 TRUE 0 0 NA B coding 339 1017 25 1041 PB.4911.2 chr8 - 6115 32 incomplete-splice_match PRKDC ENST00000314191.6 13509 86 7387 7 5prime_fragment FALSE canonical NA NA 124 None 4 13 0 FALSE 0 0 NA B coding 1656 4968 87 5054 PB.9303.5 chr17 + 1728 10 novel_not_in_catalog MILR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1111 None 4 3 0 FALSE 0 0 NA B coding 343 1029 52 1080 PB.4239.1 chr6 + 6844 40 novel_in_catalog IGF2R novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 6022 None 5 2 0 FALSE 0 0 NA B coding 2065 6195 236 6430 PB.816.3 chr1 + 2848 7 full-splice_match UHMK1 ENST00000538489.5 8446 7 20 5578 no_subtype FALSE canonical NA NA 1200 None 3 9 0 FALSE 0 0 NA C coding 344 1032 177 1208 PB.10099.1 chr19 - 3564 16 full-splice_match GYS1 ENST00000323798.7 3574 16 0 10 no_subtype TRUE canonical NA NA 315 None 30 6 0 FALSE 0 0 NA A coding 737 2211 198 2408 PB.6165.10 chr11 + 2888 10 novel_not_in_catalog TRIM22 novel NA NA NA NA no_subtype TRUE canonical NA NA 1179 None 2 8 0 TRUE 0 0 NA C coding 413 1239 534 1772 PB.7757.1 chr14 - 4178 1 full-splice_match RP11-973N13.2 ENST00000556933.1 1402 1 -20 -2756 no_subtype FALSE canonical NA NA NA None 4 28 0 FALSE 0 0 NA A coding 347 1041 20 1060 PB.1019.8 chr1 + 3079 12 novel_not_in_catalog CD46 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1096 None 2 23 2 TRUE 0 0 NA B coding 117 351 816 1166 PB.6165.14 chr11 + 1489 1 novel_in_catalog TRIM22 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 4 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8640.1 chr16 + 1718 9 full-splice_match POLR2C ENST00000219252.9 2057 9 337 2 no_subtype FALSE canonical NA NA 684 None 77 6 0 FALSE 0 0 NA A coding 275 825 2 826 PB.11237.1 GL000224.1 + 1349 2 intergenic novelGene_2 novel NA NA NA NA no_subtype FALSE canonical NA NA 673 None 2 7 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5405.1 chr9 + 1884 9 novel_not_in_catalog STX17 novel NA NA NA NA no_subtype FALSE canonical NA NA 781 None 5 6 0 TRUE 0 0 NA C coding 302 906 113 1018 PB.1888.1 chr2 - 1774 9 full-splice_match SERPINE2 ENST00000409304.5 2161 9 3 384 no_subtype FALSE canonical NA NA 187 None 15 10 0 FALSE 0 0 NA A coding 397 1191 210 1400 PB.6146.1 chr11 - 2653 5 full-splice_match ZNF195 ENST00000005082.13 2021 5 -28 -604 no_subtype FALSE canonical NA NA 107 None 3 7 0 FALSE 0 0 NA A coding 606 1818 105 1922 PB.5199.1 chr9 - 5659 2 antisense novelGene_SMARCA2_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 488 None 2 64 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7586.1 chr13 - 4127 25 novel_not_in_catalog RASA3 novel NA NA NA NA no_subtype FALSE canonical NA NA 120 None 52 18 0 TRUE 0 0 NA B coding 834 2502 66 2567 PB.5360.7 chr9 - 5725 4 novel_not_in_catalog SEMA4D novel NA NA NA NA no_subtype FALSE canonical NA NA 2416 None 3 28 2 TRUE 0 0 NA B coding 317 951 3307 4257 PB.2588.1 chr3 + 1375 1 full-splice_match RP11-185E8.2 ENST00000623631.1 1645 1 0 270 no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7032.6 chr12 + 1520 5 novel_in_catalog MYL6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1327 None 2 5 0 FALSE 0 0 NA C coding 116 348 1006 1353 PB.7032.1 chr12 + 1729 5 full-splice_match MYL6 ENST00000551589.5 1438 5 -10 -281 no_subtype FALSE canonical NA NA 392 None 5 5 0 FALSE 0 0 NA C coding 145 435 44 478 PB.9303.2 chr17 + 3161 11 novel_not_in_catalog MILR1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1322 None 2 14 0 TRUE 0 0 NA B coding 343 1029 73 1101 PB.7032.3 chr12 + 657 6 full-splice_match MYL6 ENST00000547649.5 655 6 3 -5 no_subtype FALSE canonical NA NA 464 None 4 3 0 FALSE 0 0 NA C coding 151 453 38 490 PB.7032.2 chr12 + 3187 2 novel_not_in_catalog MYL6 novel NA NA NA NA no_subtype FALSE canonical NA NA 219 None 6 17 1 TRUE 0 0 NA C coding 118 354 38 391 PB.9303.3 chr17 + 1778 11 novel_not_in_catalog MILR1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1147 None 8 4 0 TRUE 0 0 NA B coding 343 1029 63 1091 PB.9492.1 chr18 + 1834 4 full-splice_match TUBB6 ENST00000317702.9 2064 4 186 44 no_subtype FALSE canonical NA NA 325 None 35 7 0 FALSE 0 0 NA C coding 446 1338 49 1386 PB.3990.1 chr6 - 1812 4 novel_in_catalog MB21D1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 771 None 3 4 0 FALSE 0 0 NA A coding 443 1329 115 1443 PB.9492.3 chr18 + 1788 4 novel_not_in_catalog TUBB6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 307 None 2 24 2 TRUE 0 0 NA C coding 385 1155 203 1357 PB.9492.2 chr18 + 1810 5 novel_not_in_catalog TUBB6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 310 None 2 39 2 TRUE 0 0 NA C coding 374 1122 250 1371 PB.3573.1 chr5 + 3510 4 novel_not_in_catalog SLC26A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 781 None 42 13 0 TRUE 0 0 NA C coding 739 2217 83 2299 PB.3573.3 chr5 + 3444 5 novel_not_in_catalog SLC26A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2348 None 2 10 1 TRUE 0 0 NA C coding 739 2217 122 2338 PB.9320.4 chr17 + 1634 9 novel_not_in_catalog BPTF novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1590 None 2 11 2 TRUE 0 0 NA B coding 254 762 90 851 PB.7381.1 chr13 + 3760 5 antisense novelGene_CASC4P1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2413 None 2 22 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.8963.1 chr17 - 1777 12 novel_not_in_catalog SHMT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 84 None 4 2 0 FALSE 0 0 NA A coding 481 1443 110 1552 PB.8102.1 chr15 - 3189 31 novel_not_in_catalog NEDD4 novel NA NA NA NA no_subtype FALSE canonical NA NA 83 None 15 2 0 TRUE 0 0 NA B coding 900 2700 39 2738 PB.3202.1 chr5 + 1798 15 incomplete-splice_match RAI14 ENST00000265109.7 5092 18 117 3177 3prime_fragment FALSE canonical NA NA 1283 None 2 1 0 FALSE 0 0 NA C coding 542 1626 171 1796 PB.4122.1 chr6 + 3171 22 full-splice_match L3MBTL3 ENST00000533560.5 3165 22 -6 0 no_subtype FALSE canonical NA NA 2300 None 2 2 0 FALSE 0 0 NA A coding 755 2265 177 2441 PB.10662.6 chr22 + 864 4 fusion IGLV9-49,IGLL5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 413 None 3 7 1 TRUE 0 0 NA A coding 231 693 38 730 PB.10662.5 chr22 + 856 6 fusion IGLV1-50,IGLL5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 407 None 2 10 2 TRUE 0 0 NA B coding 48 144 181 324 PB.10662.4 chr22 + 867 7 novel_not_in_catalog IGLV1-50 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 414 None 40 15 2 TRUE 0 0 NA A non_coding NA NA NA NA PB.10662.3 chr22 + 893 5 fusion IGLV1-50,IGLL5 novel NA NA NA NA no_subtype TRUE canonical NA NA 447 None 2 7 2 TRUE 0 0 NA B coding 115 345 51 395 PB.10662.2 chr22 + 874 4 fusion IGLV10-54,IGLL5 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 421 None 2 7 1 TRUE 0 0 NA A coding 235 705 34 738 PB.10662.1 chr22 + 853 4 novel_not_in_catalog IGLV11-55 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 412 None 4 10 1 TRUE 0 0 NA A coding 152 456 33 488 PB.1062.3 chr1 + 1620 2 novel_not_in_catalog MIA3 novel NA NA NA NA no_subtype FALSE canonical NA NA 470 None 2 13 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.3691.1 chr5 + 2600 17 full-splice_match RUFY1 ENST00000437570.6 2642 17 40 2 no_subtype FALSE canonical NA NA 1966 None 2 4 0 FALSE 0 0 NA A coding 599 1797 311 2107 PB.6627.1 chr11 + 3198 4 novel_not_in_catalog RAB39A novel NA NA NA NA no_subtype TRUE canonical NA NA 2916 None 3 13 2 TRUE 0 0 NA A coding 217 651 116 766 PB.5706.1 chr10 + 914 8 full-splice_match COMMD3 ENST00000376836.7 1342 8 418 10 no_subtype FALSE canonical NA NA 554 None 3 2 0 FALSE 0 0 NA A coding 195 585 27 611 PB.10662.9 chr22 + 876 5 fusion IGLL5,IGLV5-48 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 428 None 18 7 0 TRUE 0 0 NA A coding 115 345 28 372 PB.10056.1 chr19 - 1551 8 full-splice_match CKM ENST00000221476.3 1657 8 103 3 no_subtype FALSE canonical NA NA 54 None 7 4 0 FALSE 0 0 NA A coding 381 1143 73 1215 PB.2619.1 chr3 + 3675 8 novel_in_catalog KLHL24 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1817 None 10 5 0 FALSE 0 0 NA A coding 600 1800 216 2015 PB.11036.2 chrX - 2861 4 novel_in_catalog FTX novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 213 None 5 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.11227.1 chrY - 2810 3 antisense novelGene_RPS4Y1_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 760 None 2 20 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.8184.1 chr15 + 510 4 full-splice_match RPLP1 ENST00000260379.10 1197 4 37 650 no_subtype FALSE canonical NA NA 393 None 3 0 0 FALSE 0 0 NA A coding 114 342 129 470 PB.6754.1 chr12 + 6836 27 novel_not_in_catalog WNK1 novel NA NA NA NA no_subtype TRUE canonical NA NA 5905 None 2 13 0 FALSE 0 0 NA B coding 2048 6144 77 6220 PB.991.1 chr1 + 1501 1 antisense novelGene_RBBP5_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6754.3 chr12 + 5632 22 novel_not_in_catalog WNK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 4701 None 2 10 1 FALSE 0 0 NA B coding 1569 4707 310 5016 PB.10433.10 chr20 - 3431 1 incomplete-splice_match ZNFX1 ENST00000371752.5 7212 14 3771 11 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C coding 685 2055 15 2069 PB.6754.4 chr12 + 5841 23 novel_not_in_catalog WNK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 4910 None 3 9 0 FALSE 0 0 NA B coding 1689 5067 159 5225 PB.6521.1 chr11 + 1574 12 full-splice_match PAAF1 ENST00000310571.7 4994 12 30 3390 no_subtype FALSE canonical NA NA 1124 None 10 1 0 FALSE 0 0 NA C coding 392 1176 24 1199 PB.5181.1 chr8 + 1484 5 full-splice_match MFSD3 ENST00000301327.4 1548 5 53 11 no_subtype FALSE canonical NA NA 1272 None 17 0 0 FALSE 0 0 NA C coding 412 1236 208 1443 PB.6754.9 chr12 + 3698 1 novel_in_catalog WNK1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 22 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2327.2 chr3 - 1687 5 novel_in_catalog MINA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 37 None 7 11 0 FALSE 0 0 NA C coding 262 786 77 862 PB.2327.1 chr3 - 2862 10 full-splice_match MINA ENST00000333396.11 5347 10 50 2435 no_subtype FALSE canonical NA NA 494 None 2 14 0 FALSE 0 0 NA C coding 465 1395 534 1928 PB.6637.1 chr11 - 2186 1 incomplete-splice_match RDX ENST00000544551.5 4117 12 1930 2 no_subtype FALSE canonical NA NA NA None 3 27 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.890.4 chr1 - 1484 3 antisense novelGene_FAM20B_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1333 None 3 12 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.6637.3 chr11 - 2821 15 novel_not_in_catalog RDX novel NA NA NA NA no_subtype FALSE canonical NA NA 146 None 2 17 1 TRUE 0 0 NA B coding 572 1716 244 1959 PB.6637.4 chr11 - 1208 10 incomplete-splice_match RDX ENST00000528498.5 2511 16 100 1203 internal_fragment FALSE canonical NA NA 146 None 2 0 0 FALSE 0 0 NA B coding 321 963 244 1206 PB.8955.1 chr17 + 1862 14 novel_not_in_catalog DRG2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1053 None 28 2 0 TRUE 0 0 NA A coding 364 1092 46 1137 PB.2445.2 chr3 - 3626 12 novel_not_in_catalog OSBPL11 novel NA NA NA NA no_subtype TRUE canonical NA NA 138 None 3 8 0 TRUE 0 0 NA B coding 525 1575 396 1970 PB.9320.1 chr17 + 2651 10 novel_not_in_catalog BPTF novel NA NA NA NA no_subtype FALSE canonical NA NA 2607 None 2 2 0 FALSE 0 0 NA B coding 848 2544 107 2650 PB.1845.1 chr2 - 4160 23 novel_in_catalog FN1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 196 None 2 16 2 FALSE 0 0 NA C coding 983 2949 520 3468 PB.3785.26 chr6 - 2520 3 novel_in_catalog FAM65B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 126 None 8 9 0 FALSE 0 0 NA C coding 115 345 66 410 PB.3785.25 chr6 - 1788 1 genic_intron novelGene_233 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10245.1 chr20 - 1253 6 full-splice_match C20orf27 ENST00000379772.3 1886 6 631 2 no_subtype FALSE canonical NA NA 94 None 3 5 0 FALSE 0 0 NA A coding 174 522 181 702 PB.3785.22 chr6 - 2999 14 full-splice_match AL078584.1 ENST00000510784.7 1944 14 -335 -720 no_subtype FALSE canonical NA NA 411 None 6 4 0 FALSE 0 0 NA A coding 647 1941 336 2276 PB.3785.21 chr6 - 2566 1 novel_in_catalog FAM65B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 7 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.11136.3 chrX - 3612 21 full-splice_match CUL4B ENST00000336592.10 3109 21 -40 -463 no_subtype FALSE non_canonical NA NA 109 None 2 17 1 FALSE 0 0 NA A coding 900 2700 82 2781 PB.9370.2 chr17 + 3823 28 novel_not_in_catalog MYO15B novel NA NA NA NA no_subtype FALSE canonical NA NA 3370 None 2 3 0 TRUE 0 0 NA B coding 1108 3324 259 3582 PB.10285.2 chr20 + 1597 2 novel_not_in_catalog PET117 novel NA NA NA NA no_subtype FALSE canonical NA NA 646 None 2 7 0 FALSE 0 0 NA A coding 100 300 1100 1399 PB.9370.1 chr17 + 3678 29 novel_not_in_catalog MYO15B novel NA NA NA NA no_subtype TRUE canonical NA NA 3224 None 4 4 0 TRUE 0 0 NA B coding 1108 3324 113 3436 PB.3785.29 chr6 - 2296 1 genic_intron novelGene_234 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 6 0 FALSE 0 0 NA A coding 99 297 305 601 PB.1742.1 chr2 + 2629 21 full-splice_match WDR75 ENST00000314761.8 2701 21 52 20 no_subtype FALSE canonical NA NA 2296 None 22 1 0 FALSE 0 0 NA C coding 830 2490 9 2498 PB.10606.4 chr21 + 1724 4 novel_not_in_catalog COL6A1 novel NA NA NA NA no_subtype TRUE canonical NA NA 983 None 2 6 1 TRUE 0 0 NA C coding 122 366 448 813 PB.1742.2 chr2 + 1485 4 full-splice_match WDR75 ENST00000475596.1 552 4 14 -947 no_subtype FALSE canonical NA NA 293 None 2 6 0 FALSE 0 0 NA C coding 127 381 12 392 PB.10606.1 chr21 + 4069 36 novel_not_in_catalog COL6A1 novel NA NA NA NA no_subtype TRUE canonical NA NA 3351 None 109 6 1 TRUE 0 0 NA C coding 1028 3084 76 3159 PB.4627.1 chr7 + 1986 16 full-splice_match ST7 ENST00000323984.7 2142 16 153 3 no_subtype FALSE canonical NA NA 1647 None 2 1 0 FALSE 0 0 NA A coding 577 1731 10 1740 PB.5722.9 chr10 + 3402 14 full-splice_match WAC ENST00000354911.8 3042 14 87 -447 no_subtype FALSE canonical NA NA 1948 None 4 6 0 FALSE 0 0 NA C coding 645 1935 81 2015 PB.10606.2 chr21 + 3251 35 full-splice_match COL6A1 ENST00000361866.7 4238 35 40 947 no_subtype FALSE canonical NA NA 2538 None 30 1 0 FALSE 0 0 NA C coding 1028 3084 75 3158 PB.5722.7 chr10 + 2985 15 novel_not_in_catalog WAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1992 None 2 7 1 TRUE 0 0 NA C coding 647 1941 119 2059 PB.5722.6 chr10 + 3424 15 novel_not_in_catalog WAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1971 None 18 5 0 TRUE 0 0 NA C coding 645 1935 104 2038 PB.5722.5 chr10 + 2656 14 novel_not_in_catalog WAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1663 None 7 5 0 TRUE 0 0 NA C coding 542 1626 105 1730 PB.5722.2 chr10 + 3474 14 full-splice_match WAC ENST00000375664.8 5924 14 327 2123 no_subtype FALSE canonical NA NA 2021 None 20 6 0 FALSE 0 0 NA C coding 602 1806 283 2088 PB.5722.1 chr10 + 3220 13 novel_in_catalog WAC novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1769 None 3 8 0 FALSE 0 0 NA C coding 499 1497 340 1836 PB.10259.1 chr20 + 3058 1 incomplete-splice_match CDS2 ENST00000460006.5 9298 13 6238 3 no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7442.1 chr13 - 3865 13 novel_not_in_catalog PROSER1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 892 None 7 4 0 TRUE 0 0 NA A coding 932 2796 848 3643 PB.2122.2 chr3 + 3076 13 incomplete-splice_match NKTR ENST00000232978.12 7343 17 75 4192 3prime_fragment FALSE canonical NA NA 1276 None 6 2 0 FALSE 0 0 NA B coding 987 2961 114 3074 PB.10787.1 chr22 + 1377 5 full-splice_match RBX1 ENST00000216225.8 1188 5 22 -211 no_subtype FALSE canonical NA NA 332 None 11 12 1 FALSE 0 0 NA A coding 108 324 19 342 PB.8803.1 chr16 - 1382 6 full-splice_match RNF166 ENST00000312838.8 1883 6 33 468 no_subtype FALSE canonical NA NA 218 None 2 5 0 FALSE 0 0 NA A coding 237 711 64 774 PB.5968.1 chr10 - 1209 5 full-splice_match BLOC1S2 ENST00000370372.6 1249 5 34 6 no_subtype FALSE canonical NA NA 74 None 7 3 0 FALSE 0 0 NA C coding 142 426 20 445 PB.3596.1 chr5 - 4541 1 antisense novelGene_G3BP1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 34 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2353.2 chr3 - 3685 20 novel_not_in_catalog CBLB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 225 None 5 7 2 TRUE 0 0 NA C coding 773 2319 240 2558 PB.1982.2 chr3 + 3615 13 full-splice_match SETD5 ENST00000466242.5 4038 13 416 7 no_subtype FALSE canonical NA NA 2645 None 2 0 0 FALSE 0 0 NA C coding 1080 3240 12 3251 PB.1982.1 chr3 + 5650 25 novel_in_catalog SETD5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4679 None 2 3 0 FALSE 0 0 NA C coding 1468 4404 882 5285 PB.5416.2 chr9 - 1733 1 incomplete-splice_match ABCA1 ENST00000374736.7 10494 50 8630 132 no_subtype FALSE canonical NA NA NA None 27 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2353.6 chr3 - 3472 18 novel_not_in_catalog CBLB novel NA NA NA NA no_subtype FALSE canonical NA NA 73 None 2 2 0 TRUE 0 0 NA C coding 764 2292 88 2379 PB.2353.7 chr3 - 3656 19 novel_in_catalog CBLB novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 130 None 8 1 0 FALSE 0 0 NA C coding 982 2946 145 3090 PB.1140.1 chr1 + 2856 2 genic_intron novelGene_1421 novel NA NA NA NA no_subtype FALSE canonical NA NA 234 None 2 9 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6535.2 chr11 - 1782 15 full-splice_match ARRB1 ENST00000360025.7 1895 15 -20 133 no_subtype FALSE canonical NA NA 138 None 21 1 0 FALSE 0 0 NA C coding 410 1230 119 1348 PB.6535.4 chr11 - 3216 1 novel_in_catalog ARRB1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9068.4 chr17 + 5589 22 novel_not_in_catalog AP2B1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2799 None 4 9 0 TRUE 0 0 NA C coding 937 2811 61 2871 PB.9320.3 chr17 + 1526 7 novel_not_in_catalog BPTF novel NA NA NA NA no_subtype FALSE canonical NA NA 1486 None 2 0 0 FALSE 0 0 NA B coding 479 1437 90 1526 PB.6766.1 chr12 + 4179 7 novel_in_catalog TSPAN9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 666 None 2 32 0 FALSE 0 0 NA A coding 239 717 19 735 PB.6744.1 chr11 - 2071 1 antisense novelGene_ADAMTS15_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A coding 99 297 1048 1344 PB.2770.1 chr4 - 2992 13 full-splice_match PPARGC1A ENST00000264867.6 6318 13 7 3319 no_subtype TRUE canonical NA NA 167 None 5 5 0 FALSE 0 0 NA A coding 794 2382 126 2507 PB.11174.1 chrX + 2692 10 full-splice_match HTATSF1 ENST00000535601.5 3019 10 316 11 no_subtype TRUE canonical NA NA 1168 None 32 2 0 FALSE 0 0 NA C coding 755 2265 107 2371 PB.8221.2 chr15 + 2968 13 full-splice_match UBE2Q2 ENST00000561851.5 1582 13 9 -1395 no_subtype FALSE canonical NA NA 1349 None 6 17 0 FALSE 0 0 NA C coding 357 1071 308 1378 PB.8221.3 chr15 + 2557 12 novel_in_catalog UBE2Q2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 918 None 2 15 0 FALSE 0 0 NA C coding 256 768 180 947 PB.8221.1 chr15 + 2737 13 full-splice_match UBE2Q2 ENST00000267938.8 3130 13 353 40 no_subtype TRUE canonical NA NA 1125 None 21 13 0 FALSE 0 0 NA C coding 375 1125 30 1154 PB.939.1 chr1 - 3591 1 full-splice_match RP11-101E13.5 ENST00000608166.1 691 1 -221 -2679 no_subtype FALSE canonical NA NA NA None 17 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4702.1 chr7 - 2752 4 genic_intron novelGene_1174 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 158 None 3 26 1 FALSE 0 0 NA B coding 144 432 1168 1599 PB.3805.2 chr6 + 1420 4 full-splice_match NFKBIL1 ENST00000376148.8 1478 4 56 2 no_subtype FALSE canonical NA NA 614 None 2 0 0 FALSE 0 0 NA C coding 381 1143 59 1201 PB.3805.1 chr6 + 1524 5 novel_in_catalog NFKBIL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 725 None 2 7 0 FALSE 0 0 NA C coding 254 762 551 1312 PB.5419.1 chr9 + 2671 13 novel_not_in_catalog FKTN novel NA NA NA NA no_subtype FALSE canonical NA NA 1516 None 4 10 1 TRUE 0 0 NA A coding 461 1383 345 1727 PB.3559.1 chr5 - 1586 7 novel_not_in_catalog YIPF5 novel NA NA NA NA no_subtype FALSE canonical NA NA 131 None 7 4 1 TRUE 0 0 NA C coding 257 771 142 912 PB.7376.6 chr12 - 3159 20 novel_not_in_catalog CHFR novel NA NA NA NA no_subtype FALSE non_canonical NA NA 20 None 22 15 2 TRUE 0 0 NA B coding 286 858 1171 2028 PB.3559.3 chr5 - 2688 3 novel_not_in_catalog YIPF5 novel NA NA NA NA no_subtype FALSE canonical NA NA 403 None 2 18 1 TRUE 0 0 NA C coding 60 180 207 386 PB.3436.2 chr5 - 1535 2 antisense novelGene_TNFAIP8_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 76 None 3 10 1 FALSE 0 0 NA A coding 138 414 320 733 PB.388.3 chr1 + 3002 15 novel_not_in_catalog ACOT11 novel NA NA NA NA no_subtype FALSE canonical NA NA 1633 None 4 3 0 TRUE 0 0 NA B coding 527 1581 206 1786 PB.9741.1 chr19 - 2973 8 novel_not_in_catalog ZNF266 novel NA NA NA NA no_subtype FALSE canonical NA NA 251 None 2 8 1 FALSE 0 0 NA A coding 616 1848 467 2314 PB.6277.1 chr11 + 3798 7 novel_not_in_catalog LDLRAD3 novel NA NA NA NA no_subtype TRUE canonical NA NA 821 None 11 22 0 TRUE 0 0 NA A coding 345 1035 22 1056 PB.4.1 chr1 - 1778 7 full-splice_match SDF4 ENST00000360001.10 1956 7 11 167 no_subtype FALSE canonical NA NA 99 None 102 6 0 FALSE 0 0 NA A coding 355 1065 274 1338 PB.5960.5 chr10 - 2708 19 novel_not_in_catalog HPS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 29 None 2 6 1 FALSE 0 0 NA B coding 649 1947 144 2090 PB.5960.4 chr10 - 3010 20 novel_not_in_catalog HPS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 248 None 3 10 1 FALSE 0 0 NA B coding 700 2100 363 2462 PB.5960.3 chr10 - 2699 19 novel_not_in_catalog HPS1 novel NA NA NA NA no_subtype FALSE canonical NA NA 49 None 9 9 2 FALSE 0 0 NA B coding 667 2001 164 2164 PB.7078.1 chr12 - 2927 1 genic RP11-196H14.3 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.3436.4 chr5 - 2952 2 genic_intron novelGene_1048 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 174 None 2 20 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.8002.1 chr15 - 2109 13 novel_not_in_catalog RMDN3 novel NA NA NA NA no_subtype FALSE canonical NA NA 44 None 4 8 0 FALSE 0 0 NA B coding 470 1410 46 1455 PB.6617.12 chr11 - 2892 7 novel_in_catalog CASP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 34 None 3 11 0 FALSE 0 0 NA C coding 225 675 28 702 PB.8002.3 chr15 - 1762 4 novel_not_in_catalog RMDN3 novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 2 8 0 FALSE 0 0 NA B coding 175 525 52 576 PB.8002.2 chr15 - 2127 13 novel_in_catalog RMDN3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 61 None 5 9 0 FALSE 0 0 NA B coding 470 1410 69 1478 PB.8002.4 chr15 - 1773 4 novel_in_catalog RMDN3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 56 None 3 8 1 FALSE 0 0 NA B coding 175 525 64 588 PB.8729.1 chr16 - 3660 1 incomplete-splice_match PHLPP2 ENST00000568954.5 8317 19 4630 28 no_subtype FALSE canonical NA NA NA None 47 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6617.14 chr11 - 2697 7 fusion CARD16,CASP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 51 None 2 9 0 TRUE 0 0 NA B coding 165 495 1766 2260 PB.7376.2 chr12 - 3139 20 novel_not_in_catalog CHFR novel NA NA NA NA no_subtype FALSE non_canonical NA NA 72 None 8 13 1 TRUE 0 0 NA B coding 285 855 1145 1999 PB.4913.4 chr8 + 1204 4 full-splice_match UBE2V2 ENST00000523111.6 4373 4 31 3138 no_subtype FALSE canonical NA NA 315 None 8 4 0 FALSE 0 0 NA A coding 145 435 25 459 PB.4913.3 chr8 + 3434 21 novel_not_in_catalog MCM4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3115 None 2 12 1 TRUE 0 0 NA C coding 863 2589 97 2685 PB.305.1 chr1 + 1416 3 full-splice_match PPCS ENST00000372561.3 1431 3 3 12 no_subtype FALSE canonical NA NA 616 None 32 5 0 FALSE 0 0 NA C coding 311 933 5 937 PB.9062.1 chr17 + 3810 5 novel_not_in_catalog SLFN5 novel NA NA NA NA no_subtype FALSE canonical NA NA 1967 None 39 4 1 FALSE 0 0 NA B coding 889 2667 109 2775 PB.9062.2 chr17 + 4238 6 novel_not_in_catalog SLFN5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2065 None 2 10 0 TRUE 0 0 NA B coding 932 2796 78 2873 PB.1046.1 chr1 + 3629 1 genic RPS6KC1 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7909.1 chr14 - 6944 2 genic_intron novelGene_902 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 6689 None 2 34 0 FALSE 0 0 NA A coding 126 378 5145 5522 PB.8061.2 chr15 + 1834 7 novel_not_in_catalog BLOC1S6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1610 None 4 6 1 TRUE 0 0 NA B coding 172 516 69 584 PB.3545.4 chr5 - 5543 29 novel_not_in_catalog DIAPH1 novel NA NA NA NA no_subtype TRUE canonical NA NA 209 None 3 19 2 TRUE 0 0 NA B coding 715 2145 93 2237 PB.9213.2 chr17 + 3134 10 novel_in_catalog CALCOCO2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2135 None 7 8 0 FALSE 0 0 NA B coding 274 822 1479 2300 PB.7047.1 chr12 - 1427 14 novel_not_in_catalog PRIM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 181 None 6 1 0 TRUE 0 0 NA A coding 420 1260 85 1344 PB.3926.1 chr6 + 5892 8 incomplete-splice_match GLTSCR1L ENST00000614467.4 6510 15 616 2 internal_fragment FALSE canonical NA NA 2162 None 2 11 0 FALSE 0 0 NA A coding 891 2673 275 2947 PB.9213.1 chr17 + 3099 12 incomplete-splice_match CALCOCO2 ENST00000258947.7 3682 13 94 489 internal_fragment FALSE canonical NA NA 1180 None 25 8 0 FALSE 0 0 NA B coding 446 1338 8 1345 PB.6364.1 chr11 + 1069 5 novel_in_catalog TMEM216 novel NA NA NA NA combination_of_known_junctions FALSE non_canonical NA NA 487 None 2 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1404.3 chr2 + 1695 1 incomplete-splice_match PCYOX1 ENST00000264441.9 2959 6 1252 13 no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.497.2 chr1 - 2872 7 novel_in_catalog DNTTIP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 612 None 4 7 0 FALSE 0 0 NA C coding 551 1653 1156 2808 PB.2724.1 chr4 - 1579 10 novel_not_in_catalog LYAR novel NA NA NA NA no_subtype FALSE canonical NA NA 150 None 4 2 1 FALSE 0 0 NA A coding 379 1137 258 1394 PB.993.1 chr1 - 3650 13 full-splice_match DSTYK ENST00000367162.7 7874 13 -170 4394 no_subtype FALSE canonical NA NA 466 None 15 4 0 FALSE 0 0 NA A coding 929 2787 202 2988 PB.497.1 chr1 - 2361 7 full-splice_match DNTTIP2 ENST00000436063.6 5897 7 28 3508 no_subtype FALSE canonical NA NA 102 None 5 3 0 FALSE 0 0 NA C coding 756 2268 31 2298 PB.10145.1 chr19 - 2702 7 novel_not_in_catalog CTC-429C10.7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 266 None 4 17 3 TRUE 0 0 NA B coding 444 1332 383 1714 PB.497.4 chr1 - 1812 3 incomplete-splice_match DNTTIP2 ENST00000436063.6 5897 7 28 4057 internal_fragment FALSE canonical NA NA 102 None 2 6 0 FALSE 0 0 NA C coding 594 1782 31 1812 PB.10145.2 chr19 - 3276 6 novel_not_in_catalog CTC-429C10.7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 258 None 2 25 3 TRUE 0 0 NA B coding 380 1140 1149 2288 PB.8495.1 chr16 - 2705 17 full-splice_match COG7 ENST00000307149.9 2926 17 31 190 no_subtype FALSE canonical NA NA 324 None 39 3 0 FALSE 0 0 NA A coding 770 2310 156 2465 PB.11199.11 chrX - 3249 20 novel_in_catalog ARHGAP4 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 119 None 3 4 0 FALSE 0 0 NA C coding 641 1923 53 1975 PB.8327.2 chr15 + 3798 3 genic_intron novelGene_917 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2256 None 2 32 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.7107.1 chr12 - 2906 12 novel_not_in_catalog CPM novel NA NA NA NA no_subtype TRUE canonical NA NA 30 None 4 11 0 TRUE 0 0 NA B coding 443 1329 34 1362 PB.102.3 chr1 - 2944 15 novel_in_catalog TMCO4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 141 None 2 5 0 FALSE 0 0 NA B coding 634 1902 242 2143 PB.102.2 chr1 - 2890 15 novel_not_in_catalog TMCO4 novel NA NA NA NA no_subtype FALSE canonical NA NA 87 None 2 2 0 FALSE 0 0 NA B coding 634 1902 188 2089 PB.7953.1 chr14 - 2073 2 full-splice_match CDCA4 ENST00000336219.3 2513 2 66 374 no_subtype FALSE canonical NA NA 84 None 5 9 0 FALSE 0 0 NA A coding 241 723 91 813 PB.1377.1 chr2 - 1950 2 genic_intron novelGene_609 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 797 None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4344.1 chr7 - 2724 5 full-splice_match JAZF1 ENST00000283928.9 3125 5 -40 441 no_subtype FALSE canonical NA NA 321 None 52 13 0 FALSE 0 0 NA A coding 243 729 207 935 PB.6824.1 chr12 - 2053 6 novel_not_in_catalog CLEC7A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 187 None 2 10 0 TRUE 0 0 NA B coding 201 603 85 687 PB.4344.3 chr7 - 1523 1 genic_intron novelGene_272 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1099.2 chr1 + 1703 7 novel_not_in_catalog GUK1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1421 None 2 10 1 TRUE 0 0 NA C coding 173 519 933 1451 PB.1099.3 chr1 + 6552 7 novel_not_in_catalog GUK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 6278 None 2 45 2 TRUE 0 0 NA C coding 173 519 5790 6308 PB.8721.1 chr16 + 4153 26 full-splice_match SF3B3 ENST00000302516.9 9720 26 54 5513 no_subtype FALSE canonical NA NA 3670 None 154 6 0 FALSE 0 0 NA A coding 1217 3651 158 3808 PB.1099.1 chr1 + 900 8 full-splice_match GUK1 ENST00000391865.7 990 8 70 20 no_subtype FALSE canonical NA NA 629 None 4 1 0 FALSE 0 0 NA C coding 218 654 6 659 PB.9318.4 chr17 + 2504 1 novel_in_catalog PITPNC1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA C coding 14 42 279 320 PB.738.1 chr1 - 3525 11 full-splice_match UBQLN4 ENST00000368309.3 3576 11 47 4 no_subtype FALSE canonical NA NA 154 None 21 9 0 FALSE 0 0 NA C coding 601 1803 47 1849 PB.1845.10 chr2 - 3795 22 novel_in_catalog FN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 196 None 8 4 0 FALSE 0 0 NA C coding 958 2874 247 3120 PB.3893.2 chr6 + 1545 5 novel_not_in_catalog FGD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 541 None 3 7 0 TRUE 0 0 NA B coding 176 528 164 691 PB.3893.3 chr6 + 1461 5 novel_not_in_catalog FGD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 456 None 2 7 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.1301.1 chr2 + 2757 2 genic_intron novelGene_430 novel NA NA NA NA no_subtype FALSE canonical NA NA 2373 None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7107.2 chr12 - 3067 1 genic_intron novelGene_655 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 41 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10159.2 chr19 + 3858 6 novel_not_in_catalog ZNF331 novel NA NA NA NA no_subtype FALSE canonical NA NA 2539 None 2 21 2 TRUE 0 0 NA C coding 463 1389 249 1637 PB.5372.1 chr9 - 5793 6 novel_not_in_catalog ZNF484 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 145 None 2 24 0 TRUE 0 0 NA A coding 852 2556 176 2731 PB.10159.1 chr19 + 2155 6 full-splice_match ZNF331 ENST00000411977.6 2248 6 90 3 no_subtype FALSE canonical NA NA 468 None 2 7 1 FALSE 0 0 NA C coding 463 1389 333 1721 PB.214.12 chr1 - 3920 22 full-splice_match PUM1 ENST00000440538.6 3936 22 -10 26 no_subtype FALSE canonical NA NA 79 None 2 1 1 FALSE 0 0 NA C coding 1162 3486 91 3576 PB.3016.1 chr4 - 3639 23 novel_not_in_catalog SEC24D novel NA NA NA NA no_subtype FALSE non_canonical NA NA 128 None 48 3 0 FALSE 0 0 NA B coding 1032 3096 170 3265 PB.214.10 chr1 - 3711 20 novel_in_catalog PUM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 80 None 4 0 0 FALSE 0 0 NA C coding 1090 3270 92 3361 PB.2712.2 chr4 - 5598 3 novel_not_in_catalog MXD4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 859 None 4 38 1 TRUE 0 0 NA B coding 170 510 1584 2093 PB.2712.1 chr4 - 5494 5 novel_not_in_catalog MXD4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 864 None 2 47 2 TRUE 0 0 NA B coding 170 510 1589 2098 PB.3016.4 chr4 - 3692 24 novel_not_in_catalog SEC24D novel NA NA NA NA no_subtype TRUE canonical NA NA 34 None 6 11 1 TRUE 0 0 NA B coding 1032 3096 223 3318 PB.6162.1 chr11 - 2504 3 novel_not_in_catalog AC015691.13 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1268 None 4 16 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.4135.1 chr6 - 3151 1 genic_intron novelGene_1150 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 20 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8886.1 chr17 + 3521 9 full-splice_match BCL6B ENST00000293805.9 3555 9 32 2 no_subtype FALSE canonical NA NA 1383 None 2 10 1 FALSE 0 0 NA A coding 479 1437 61 1497 PB.48.3 chr1 - 3894 14 full-splice_match CLSTN1 ENST00000435891.5 3829 14 -65 0 no_subtype FALSE canonical NA NA 174 None 4 21 0 FALSE 0 0 NA C coding 614 1842 570 2411 PB.3430.1 chr5 + 1431 8 novel_not_in_catalog COMMD10 novel NA NA NA NA no_subtype FALSE canonical NA NA 598 None 27 2 0 FALSE 0 0 NA A coding 202 606 29 634 PB.8227.1 chr15 - 2967 2 genic_intron novelGene_718 novel NA NA NA NA no_subtype FALSE canonical NA NA 1920 None 5 19 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10592.1 chr21 + 3151 4 novel_in_catalog TRAPPC10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 545 None 2 17 0 FALSE 0 0 NA A coding 189 567 215 781 PB.8280.4 chr15 + 6074 6 novel_not_in_catalog ABHD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 5792 None 3 35 0 TRUE 0 0 NA C coding 241 723 115 837 PB.7127.1 chr12 - 1436 10 full-splice_match KRR1 ENST00000229214.8 10118 10 -12 8694 no_subtype FALSE canonical NA NA 121 None 4 3 0 FALSE 0 0 NA C coding 381 1143 37 1179 PB.5883.2 chr10 - 6037 19 novel_not_in_catalog WAPL novel NA NA NA NA no_subtype FALSE canonical NA NA 160 None 2 12 0 FALSE 0 0 NA A coding 1190 3570 181 3750 PB.7107.3 chr12 - 2740 10 novel_not_in_catalog CPM novel NA NA NA NA no_subtype FALSE canonical NA NA 26 None 71 9 0 TRUE 0 0 NA B coding 443 1329 30 1358 PB.3567.1 chr5 + 2498 6 full-splice_match PCYOX1L ENST00000274569.8 2546 6 45 3 no_subtype FALSE canonical NA NA 840 None 5 10 0 FALSE 0 0 NA A coding 494 1482 18 1499 PB.8351.11 chr16 + 2796 19 novel_not_in_catalog RHOT2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1935 None 2 13 1 TRUE 0 0 NA B coding 396 1188 47 1234 PB.10233.1 chr20 - 3597 7 novel_not_in_catalog ZNF343 novel NA NA NA NA no_subtype FALSE canonical NA NA 109 None 2 7 0 FALSE 0 0 NA A coding 599 1797 469 2265 PB.7140.2 chr12 + 2850 7 full-splice_match C12orf29 ENST00000356891.3 2919 7 66 3 no_subtype FALSE canonical NA NA 926 None 7 15 0 FALSE 0 0 NA C coding 325 975 138 1112 PB.7140.1 chr12 + 2711 6 full-splice_match C12orf29 ENST00000550333.5 2740 6 27 2 no_subtype FALSE canonical NA NA 788 None 7 14 0 FALSE 0 0 NA C coding 46 138 837 974 PB.2449.1 chr3 + 3385 16 full-splice_match MCM2 ENST00000265056.11 3622 16 227 10 no_subtype FALSE canonical NA NA 2621 None 20 9 1 FALSE 0 0 NA A coding 895 2685 45 2729 PB.5902.2 chr10 + 1419 1 incomplete-splice_match IFIT1B ENST00000371809.3 1972 2 549 5 no_subtype FALSE canonical NA NA NA None 2 2 0 FALSE 0 0 NA C coding 199 597 357 953 PB.5902.1 chr10 + 1967 2 full-splice_match IFIT1B ENST00000371809.3 1972 2 2 3 no_subtype FALSE canonical NA NA 83 None 12 4 1 FALSE 0 0 NA C coding 474 1422 79 1500 PB.5374.3 chr9 + 2754 6 novel_not_in_catalog FGD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1939 None 10 7 0 TRUE 0 0 NA C coding 227 681 269 949 PB.8351.13 chr16 + 2697 20 novel_not_in_catalog RHOT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1837 None 4 18 1 TRUE 0 0 NA B coding 662 1986 35 2020 PB.487.1 chr1 + 1015 8 full-splice_match RPL5 ENST00000370321.7 1043 8 15 13 no_subtype FALSE canonical NA NA 869 None 28 2 0 FALSE 0 0 NA A coding 297 891 76 966 PB.487.2 chr1 - 3419 3 genic FAM69A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 229 None 2 27 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.10371.1 chr20 + 3639 7 full-splice_match RPRD1B ENST00000373433.8 3874 7 224 11 no_subtype FALSE canonical NA NA 1009 None 11 8 0 FALSE 0 0 NA A coding 326 978 179 1156 PB.10526.1 chr21 - 4003 20 full-splice_match SCAF4 ENST00000286835.11 4193 20 -17 207 no_subtype FALSE canonical NA NA 430 None 2 9 0 FALSE 0 0 NA C coding 1147 3441 401 3841 PB.7959.262 chr14 - 1580 5 novel_not_in_catalog IGHM novel NA NA NA NA no_subtype FALSE canonical NA NA 100 None 2 3 0 TRUE 0 0 NA B coding 375 1125 334 1458 PB.9140.1 chr17 - 3741 9 full-splice_match FAM134C ENST00000309428.9 3759 9 10 8 no_subtype FALSE canonical NA NA 289 None 57 22 0 FALSE 0 0 NA A coding 466 1398 51 1448 PB.7959.261 chr14 - 1897 12 fusion IGHM,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 83 None 4 9 6 TRUE 0 0 NA B coding 375 1125 651 1775 PB.2538.12 chr3 + 2657 1 genic_intron novelGene_1249 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10722.1 chr22 + 3295 4 full-splice_match ISX ENST00000308700.6 3384 4 85 4 no_subtype FALSE canonical NA NA 1365 None 2 10 0 FALSE 0 0 NA C coding 245 735 868 1602 PB.6819.1 chr12 - 1613 1 genic_intron novelGene_69 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7979.2 chr15 + 3040 1 incomplete-splice_match GREM1 ENST00000622074.1 14606 2 1120 10447 no_subtype FALSE canonical NA NA NA None 6 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7979.1 chr15 + 2771 2 full-splice_match GREM1 ENST00000622074.1 14606 2 30 11805 no_subtype FALSE canonical NA NA 158 None 26 12 0 FALSE 0 0 NA C coding 184 552 160 711 PB.5374.5 chr9 + 6848 3 novel_not_in_catalog FGD3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 6775 None 3 39 1 TRUE 0 0 NA C coding 122 366 283 648 PB.7558.3 chr13 + 2744 1 genic_intron novelGene_916 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2917.1 chr4 + 1612 10 full-splice_match COPS4 ENST00000264389.6 1744 10 121 11 no_subtype FALSE canonical NA NA 1101 None 39 2 0 FALSE 0 0 NA A coding 406 1218 15 1232 PB.3464.1 chr5 + 3242 10 full-splice_match SLC22A5 ENST00000245407.7 3237 10 -14 9 no_subtype FALSE canonical NA NA 1821 None 4 11 0 FALSE 0 0 NA A coding 557 1671 236 1906 PB.10457.1 chr20 + 1546 9 full-splice_match RTFDC1 ENST00000357348.9 2212 9 99 567 no_subtype FALSE canonical NA NA 750 None 28 2 0 FALSE 0 0 NA A coding 306 918 9 926 PB.7375.2 chr12 - 3100 9 novel_not_in_catalog ANKLE2 novel NA NA NA NA no_subtype FALSE canonical NA NA 65 None 4 16 0 TRUE 0 0 NA A coding 293 879 648 1526 PB.120.1 chr1 - 995 1 antisense novelGene_CDC42_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 2 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6629.1 chr11 + 1526 12 full-splice_match ACAT1 ENST00000265838.8 1761 12 12 223 no_subtype FALSE canonical NA NA 1242 None 18 4 0 FALSE 0 0 NA C coding 427 1281 80 1360 PB.6629.2 chr11 + 2738 2 novel_not_in_catalog ACAT1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1827 None 9 28 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.9656.2 chr19 + 3390 15 full-splice_match SPPL2B ENST00000613503.4 3456 15 62 4 no_subtype FALSE canonical NA NA 1533 None 27 15 1 FALSE 0 0 NA C coding 592 1776 19 1794 PB.15.1 chr1 - 2922 12 novel_not_in_catalog NADK novel NA NA NA NA no_subtype FALSE non_canonical NA NA 108 None 3 22 0 TRUE 0 0 NA B coding 360 1080 191 1270 PB.6295.1 chr11 + 4122 13 novel_not_in_catalog CRY2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1803 None 12 12 0 TRUE 0 0 NA A coding 593 1779 14 1792 PB.8066.1 chr15 + 1658 6 full-splice_match DUT ENST00000455976.6 1935 6 -674 951 no_subtype TRUE canonical NA NA 1261 None 3 13 0 FALSE 0 0 NA A coding 164 492 824 1315 PB.11103.1 chrX + 2201 13 full-splice_match ATG4A ENST00000372232.7 2315 13 112 2 no_subtype FALSE canonical NA NA 1173 None 2 5 0 FALSE 0 0 NA A coding 398 1194 48 1241 PB.1979.1 chr3 + 5746 13 novel_in_catalog EDEM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1625 None 4 30 1 FALSE 0 0 NA C coding 528 1584 129 1712 PB.4909.5 chr8 + 2796 1 genic_intron novelGene_472 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9688.1 chr19 - 981 6 full-splice_match MYDGF ENST00000262947.7 1018 6 25 12 no_subtype TRUE canonical NA NA 185 None 3 3 0 FALSE 0 0 NA A coding 173 519 12 530 PB.4909.3 chr8 + 3087 19 novel_not_in_catalog SPIDR novel NA NA NA NA no_subtype FALSE canonical NA NA 2484 None 2 8 0 TRUE 0 0 NA B coding 696 2088 538 2625 PB.4909.2 chr8 + 3109 21 novel_not_in_catalog SPIDR novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2506 None 4 12 2 TRUE 0 0 NA B coding 742 2226 422 2647 PB.4909.1 chr8 + 3278 23 novel_not_in_catalog SPIDR novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2670 None 14 9 2 TRUE 0 0 NA B coding 696 2088 724 2811 PB.3938.1 chr6 + 1247 9 full-splice_match POLR1C ENST00000372389.7 1355 9 81 27 no_subtype FALSE canonical NA NA 929 None 6 2 0 FALSE 0 0 NA A coding 346 1038 8 1045 PB.9735.2 chr19 + 1573 6 novel_not_in_catalog MARCH2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 950 None 4 7 0 TRUE 0 0 NA B coding 246 738 369 1106 PB.9735.1 chr19 + 1596 8 novel_not_in_catalog MARCH2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 972 None 2 6 0 TRUE 0 0 NA B coding 246 738 391 1128 PB.2803.1 chr4 - 3536 1 genic TLR6 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2844.1 chr4 - 3179 3 novel_not_in_catalog LNX1 novel NA NA NA NA no_subtype FALSE canonical NA NA 130 None 5 12 0 TRUE 0 0 NA A coding 127 381 217 597 PB.4524.1 chr7 + 5592 15 novel_not_in_catalog LMTK2 novel NA NA NA NA no_subtype FALSE canonical NA NA 4789 None 18 6 0 TRUE 0 0 NA A coding 1503 4509 307 4815 PB.5934.1 chr10 + 3776 10 full-splice_match ENTPD1 ENST00000371205.4 2035 10 193 -1934 no_subtype TRUE canonical NA NA 1416 None 17 12 0 FALSE 0 0 NA A coding 510 1530 91 1620 PB.678.13 chr1 - 3863 8 novel_in_catalog SELENBP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 67 None 2 19 0 FALSE 0 0 NA C coding 167 501 3127 3627 PB.678.12 chr1 - 1692 12 full-splice_match SELENBP1 ENST00000368868.9 1752 12 28 32 no_subtype FALSE canonical NA NA 68 None 105 1 0 FALSE 0 0 NA C coding 472 1416 65 1480 PB.6354.1 chr11 - 2893 2 full-splice_match PTGDR2 ENST00000332539.4 2895 2 -4 6 no_subtype FALSE canonical NA NA 107 None 3 14 0 FALSE 0 0 NA A coding 395 1185 117 1301 PB.5350.1 chr9 + 3218 25 novel_not_in_catalog NAA35 novel NA NA NA NA no_subtype FALSE canonical NA NA 2454 None 4 13 0 TRUE 0 0 NA B coding 725 2175 337 2511 PB.5350.2 chr9 + 3041 24 novel_not_in_catalog NAA35 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2278 None 2 14 0 TRUE 0 0 NA B coding 725 2175 161 2335 PB.4058.12 chr6 - 1788 2 genic SCML4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1082 None 6 12 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.1667.2 chr2 - 3424 26 full-splice_match DPP4 ENST00000360534.7 3904 26 471 9 no_subtype TRUE canonical NA NA 96 None 8 5 1 FALSE 0 0 NA C coding 766 2298 91 2388 PB.6811.1 chr12 - 2715 10 full-splice_match MFAP5 ENST00000359478.6 2845 10 137 -7 no_subtype FALSE canonical NA NA 49 None 6 11 0 FALSE 0 0 NA A coding 173 519 52 570 PB.5809.1 chr10 + 2532 15 full-splice_match DDX50 ENST00000373585.7 2538 15 4 2 no_subtype FALSE canonical NA NA 2038 None 16 2 0 FALSE 0 0 NA A coding 737 2211 104 2314 PB.3452.1 chr5 - 3570 13 incomplete-splice_match FBN2 ENST00000619499.4 10154 67 6709 -125 5prime_fragment FALSE canonical NA NA 45 None 2 14 1 FALSE 0 0 NA A coding 665 1995 30 2024 PB.799.2 chr1 - 1837 10 full-splice_match F11R ENST00000368026.10 4835 10 222 2776 no_subtype FALSE canonical NA NA 117 None 13 5 0 FALSE 0 0 NA C coding 299 897 54 950 PB.10365.1 chr20 + 1983 18 novel_not_in_catalog RPN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1893 None 106 0 0 TRUE 0 0 NA A coding 631 1893 11 1903 PB.1867.3 chr2 - 2843 9 full-splice_match CNPPD1 ENST00000453038.5 1154 9 190 -1879 no_subtype FALSE canonical NA NA 20 None 2 10 0 FALSE 0 0 NA C coding 410 1230 40 1269 PB.9128.4 chr17 - 1278 7 novel_not_in_catalog KAT2A novel NA NA NA NA no_subtype FALSE canonical NA NA 107 None 3 4 0 FALSE 0 0 NA C coding 187 561 183 743 PB.9128.3 chr17 - 3279 18 full-splice_match KAT2A ENST00000465682.5 2990 18 -288 -1 no_subtype TRUE canonical NA NA 381 None 22 5 0 FALSE 0 0 NA C coding 476 1428 1317 2744 PB.9128.2 chr17 - 3105 18 full-splice_match KAT2A ENST00000225916.9 3109 18 -6 10 no_subtype FALSE canonical NA NA 399 None 11 4 0 FALSE 0 0 NA C coding 837 2511 61 2571 PB.9128.1 chr17 - 1382 6 novel_not_in_catalog KAT2A novel NA NA NA NA no_subtype FALSE canonical NA NA 74 None 2 13 0 FALSE 0 0 NA C coding 113 339 150 488 PB.10483.1 chr20 - 3177 13 novel_not_in_catalog HELZ2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1004 None 19 3 0 TRUE 0 0 NA B coding 577 1731 919 2649 PB.235.1 chr1 - 2526 13 full-splice_match YARS ENST00000373477.8 3238 13 704 8 no_subtype FALSE canonical NA NA 262 None 3 11 0 FALSE 0 0 NA A coding 528 1584 206 1789 PB.3483.1 chr5 + 2666 2 novel_not_in_catalog UBE2B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1900 None 21 24 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.6700.1 chr11 + 2741 8 novel_in_catalog TBCEL novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1181 None 2 14 0 FALSE 0 0 NA A coding 424 1272 226 1497 PB.7959.239 chr14 - 1571 11 fusion IGHV5-51,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 104 None 2 13 6 TRUE 0 0 NA B coding 196 588 858 1445 PB.2181.3 chr3 + 2788 2 novel_not_in_catalog P4HTM novel NA NA NA NA no_subtype FALSE canonical NA NA 2091 None 2 36 1 TRUE 0 0 NA B coding 191 573 17 589 PB.2181.2 chr3 + 1729 10 novel_not_in_catalog P4HTM novel NA NA NA NA no_subtype FALSE canonical NA NA 1304 None 11 5 1 TRUE 0 0 NA B coding 382 1146 13 1158 PB.7959.234 chr14 - 1507 10 fusion IGHV4-34,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 4 10 4 TRUE 0 0 NA B coding 196 588 792 1379 PB.3367.1 chr5 - 2952 10 novel_not_in_catalog CCNH novel NA NA NA NA no_subtype FALSE canonical NA NA 198 None 8 17 0 TRUE 0 0 NA A coding 323 969 82 1050 PB.7959.236 chr14 - 1559 10 fusion IGHV1-2,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 105 None 2 16 5 TRUE 0 0 NA B coding 196 588 846 1433 PB.7959.237 chr14 - 1500 10 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 83 None 2 15 4 TRUE 0 0 NA B coding 196 588 787 1374 PB.9418.1 chr17 + 4130 7 novel_not_in_catalog CBX2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3502 None 2 25 2 TRUE 0 0 NA A coding 532 1596 39 1634 PB.5361.10 chr9 + 5710 3 novel_in_catalog SYK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 630 None 2 21 1 FALSE 0 0 NA C coding 193 579 214 792 PB.7959.232 chr14 - 1487 11 fusion IGHV4-4,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 17 5 TRUE 0 0 NA B coding 196 588 772 1359 PB.7959.233 chr14 - 1572 9 fusion IGHV1-24,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 100 None 5 14 4 TRUE 0 0 NA B coding 196 588 857 1444 PB.5361.11 chr9 + 2534 13 novel_in_catalog SYK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1924 None 4 4 1 FALSE 0 0 NA C coding 612 1836 159 1994 PB.6019.1 chr10 + 1687 1 novel_in_catalog MXI1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2498.1 chr3 + 4633 7 full-splice_match SLC25A36 ENST00000324194.10 1301 7 -53 -3279 no_subtype FALSE canonical NA NA 963 None 3 28 0 FALSE 0 0 NA C coding 311 933 222 1154 PB.5358.4 chr9 + 3403 17 full-splice_match SECISBP2 ENST00000375807.7 3462 17 45 14 no_subtype FALSE canonical NA NA 2487 None 5 6 0 FALSE 0 0 NA C coding 854 2562 27 2588 PB.5361.16 chr9 + 1842 3 novel_in_catalog SYK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 615 None 2 6 1 FALSE 0 0 NA C coding 193 579 199 777 PB.4098.1 chr6 - 3195 1 full-splice_match TSPYL1 ENST00000368608.3 3326 1 -23 154 no_subtype FALSE canonical NA NA NA None 149 17 0 FALSE 0 0 NA A coding 437 1311 97 1407 PB.7361.1 chr12 - 2567 15 novel_not_in_catalog SCARB1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 271 None 20 3 0 TRUE 0 0 NA A coding 509 1527 146 1672 PB.2425.2 chr3 - 3339 12 novel_not_in_catalog PARP9 novel NA NA NA NA no_subtype FALSE canonical NA NA 357 None 5 3 0 TRUE 0 0 NA B coding 819 2457 447 2903 PB.5358.1 chr9 + 2778 7 novel_in_catalog SECISBP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2727 None 3 7 0 FALSE 0 0 NA C coding 303 909 104 1012 PB.936.2 chr1 + 2640 10 novel_in_catalog TROVE2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1958 None 3 8 0 FALSE 0 0 NA C coding 538 1614 495 2108 PB.5358.3 chr9 + 3346 17 novel_not_in_catalog SECISBP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2420 None 4 6 0 FALSE 0 0 NA C coding 678 2034 488 2521 PB.5225.1 chr9 - 2596 9 full-splice_match NFIB ENST00000380959.7 8198 9 -156 5758 no_subtype FALSE canonical NA NA 660 None 2 6 0 FALSE 0 0 NA C coding 419 1257 634 1890 PB.8713.1 chr16 - 1590 6 full-splice_match NQO1 ENST00000320623.9 2912 6 391 931 no_subtype FALSE canonical NA NA 128 None 38 6 0 FALSE 0 0 NA A coding 274 822 122 943 PB.229.1 chr1 + 2066 14 full-splice_match HDAC1 ENST00000373548.7 2124 14 46 12 no_subtype FALSE canonical NA NA 1459 None 59 3 0 FALSE 0 0 NA A coding 482 1446 39 1484 PB.11127.1 chrX - 3290 3 full-splice_match NKRF ENST00000304449.5 3269 3 -529 508 no_subtype FALSE canonical NA NA 694 None 7 1 0 FALSE 0 0 NA A coding 684 2052 729 2780 PB.7221.1 chr12 - 6440 3 genic_intron novelGene_965 novel NA NA NA NA no_subtype FALSE canonical NA NA 3876 None 2 29 0 FALSE 0 0 NA A coding 135 405 5876 6280 PB.10809.1 chr22 - 3248 11 full-splice_match PACSIN2 ENST00000263246.7 3249 11 -4 5 no_subtype FALSE canonical NA NA 129 None 106 17 0 FALSE 0 0 NA C coding 486 1458 207 1664 PB.10809.2 chr22 - 3126 10 novel_in_catalog PACSIN2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 129 None 19 16 0 FALSE 0 0 NA C coding 445 1335 207 1541 PB.10809.3 chr22 - 3037 11 novel_not_in_catalog PACSIN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 6 None 6 12 0 FALSE 0 0 NA C coding 486 1458 84 1541 PB.10809.6 chr22 - 3002 10 novel_not_in_catalog PACSIN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 6 None 2 15 1 FALSE 0 0 NA C coding 445 1335 84 1418 PB.2010.1 chr3 - 1014 1 incomplete-splice_match IQSEC1 ENST00000273221.8 5279 14 3597 669 no_subtype FALSE canonical NA NA NA None 4 6 0 FALSE 0 0 NA B coding 114 342 316 657 PB.3431.3 chr5 - 3543 4 genic_intron novelGene_1031 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 106 None 2 28 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.8374.1 chr16 - 1304 4 full-splice_match MSRB1 ENST00000361871.7 1423 4 84 35 no_subtype FALSE canonical NA NA 141 None 27 3 0 FALSE 0 0 NA C coding 94 282 87 368 PB.6768.1 chr12 - 3700 22 novel_not_in_catalog CRACR2A novel NA NA NA NA no_subtype TRUE canonical NA NA 215 None 2 21 0 TRUE 0 0 NA A coding 731 2193 602 2794 PB.8374.2 chr16 - 1223 4 novel_not_in_catalog MSRB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 53 None 2 2 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5658.1 chr10 + 1799 1 antisense novelGene_GDI2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 10 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8127.2 chr15 - 2880 1 antisense novelGene_CTD-2501E16.2_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8127.1 chr15 - 1658 2 full-splice_match RORA ENST00000558234.1 3910 2 7 2245 no_subtype FALSE canonical NA NA 124 None 4 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1617.1 chr2 + 1924 1 antisense novelGene_RP11-570L15.1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1236.1 chr2 - 1638 13 full-splice_match EIF2B4 ENST00000347454.8 1792 13 146 8 no_subtype FALSE canonical NA NA 57 None 25 1 0 FALSE 0 0 NA C coding 523 1569 27 1595 PB.1236.2 chr2 - 1665 13 novel_not_in_catalog EIF2B4 novel NA NA NA NA no_subtype FALSE canonical NA NA 93 None 5 1 0 FALSE 0 0 NA C coding 508 1524 108 1631 PB.7788.1 chr14 + 2707 7 novel_in_catalog SRSF5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1896 None 30 10 1 FALSE 0 0 NA C coding 145 435 1727 2161 PB.7821.1 chr14 - 5516 23 novel_not_in_catalog NEK9 novel NA NA NA NA no_subtype FALSE canonical NA NA 356 None 50 10 0 TRUE 0 0 NA B coding 979 2937 138 3074 PB.7788.3 chr14 + 2835 7 full-splice_match SRSF5 ENST00000556184.5 2443 7 -30 -362 no_subtype FALSE canonical NA NA 2024 None 10 8 0 FALSE 0 0 NA C coding 145 435 1855 2289 PB.7788.2 chr14 + 1492 8 full-splice_match SRSF5 ENST00000557154.5 1500 8 21 -13 no_subtype FALSE canonical NA NA 681 None 42 3 1 FALSE 0 0 NA C coding 272 816 131 946 PB.2970.1 chr4 - 2786 8 full-splice_match TRMT10A ENST00000394876.6 1638 8 26 -1174 no_subtype FALSE canonical NA NA 94 None 7 19 0 FALSE 0 0 NA A coding 339 1017 118 1134 PB.7788.4 chr14 + 2986 6 full-splice_match SRSF5 ENST00000554465.5 3044 6 52 6 no_subtype FALSE canonical NA NA 2181 None 4 8 0 FALSE 0 0 NA C coding 145 435 2012 2446 PB.3682.1 chr5 - 754 4 full-splice_match NHP2 ENST00000274606.7 865 4 101 10 no_subtype FALSE canonical NA NA 209 None 5 0 0 FALSE 0 0 NA A coding 153 459 50 508 PB.598.1 chr1 + 3382 22 novel_in_catalog ATP1A1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3032 None 342 0 0 FALSE 0 0 NA B coding 992 2976 83 3058 PB.598.2 chr1 + 3621 24 novel_not_in_catalog ATP1A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3266 None 3 1 1 TRUE 0 0 NA B coding 1023 3069 224 3292 PB.357.1 chr1 + 2928 2 genic_intron novelGene_502 novel NA NA NA NA no_subtype FALSE canonical NA NA 2863 None 4 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1026.6 chr1 + 3632 3 novel_in_catalog TRAF3IP3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2598 None 2 15 0 FALSE 0 0 NA B coding 212 636 2497 3132 PB.9392.1 chr17 - 1611 6 full-splice_match JMJD6 ENST00000397625.8 1603 6 -19 11 no_subtype FALSE canonical NA NA 263 None 16 3 0 FALSE 0 0 NA A coding 403 1209 135 1343 PB.3546.1 chr5 - 1922 15 full-splice_match HDAC3 ENST00000305264.7 1959 15 30 7 no_subtype FALSE canonical NA NA 105 None 7 4 0 FALSE 0 0 NA A coding 428 1284 51 1334 PB.221.1 chr1 + 975 6 incomplete-splice_match KHDRBS1 ENST00000492989.1 1215 8 540 -300 internal_fragment FALSE canonical NA NA 577 None 2 0 0 FALSE 0 0 NA A coding 219 657 16 672 PB.3343.1 chr5 - 2847 3 novel_not_in_catalog LHFPL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 599 None 2 25 2 TRUE 0 0 NA A non_coding NA NA NA NA PB.3304.1 chr5 + 1476 9 full-splice_match CCNB1 ENST00000256442.9 2169 9 139 554 no_subtype FALSE canonical NA NA 1308 None 19 1 0 FALSE 0 0 NA A coding 433 1299 115 1413 PB.6665.1 chr11 + 3045 2 novel_not_in_catalog CD3E novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1539 None 2 11 1 TRUE 0 0 NA A coding 113 339 2388 2726 PB.2634.1 chr3 - 3594 2 antisense novelGene_VPS8_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 3411 None 2 21 1 FALSE 0 0 NA A coding 118 354 2774 3127 PB.8737.1 chr16 - 3333 1 genic_intron novelGene_680 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A coding 118 354 1503 1856 PB.2910.1 chr4 + 2015 3 genic RP11-127B20.3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1381 None 2 20 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.4239.13 chr6 + 3583 18 incomplete-splice_match IGF2R ENST00000356956.5 14044 48 4453 6008 internal_fragment FALSE canonical NA NA 2760 None 4 2 0 FALSE 0 0 NA B coding 1006 3018 151 3168 PB.6363.8 chr11 - 2765 7 novel_not_in_catalog CYB561A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 559 None 5 9 0 TRUE 0 0 NA B coding 242 726 575 1300 PB.7649.1 chr14 - 4003 24 novel_not_in_catalog HEATR5A novel NA NA NA NA no_subtype FALSE canonical NA NA 179 None 2 4 1 FALSE 0 0 NA A coding 1250 3750 254 4003 PB.9398.4 chr17 + 1816 3 genic_intron novelGene_724 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1109 None 2 22 2 FALSE 0 0 NA A coding 149 447 62 508 PB.10296.1 chr20 - 2242 3 novel_not_in_catalog NKX2-2 novel NA NA NA NA no_subtype FALSE canonical NA NA 85 None 2 5 0 TRUE 0 0 NA A coding 273 819 531 1349 PB.3044.2 chr4 + 2934 5 novel_not_in_catalog NOCT novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2319 None 9 20 2 TRUE 0 0 NA B coding 431 1293 202 1494 PB.3196.1 chr5 + 3429 5 full-splice_match SUB1 ENST00000265073.8 3507 5 75 3 no_subtype FALSE canonical NA NA 357 None 13 17 0 FALSE 0 0 NA A coding 127 381 54 434 PB.985.2 chr1 + 3548 4 novel_not_in_catalog ATP2B4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 312 None 4 23 3 TRUE 0 0 NA B non_coding NA NA NA NA PB.5480.11 chr9 + 1469 9 novel_in_catalog AL513122.2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1055 None 2 2 0 FALSE 0 0 NA A coding 350 1050 173 1222 PB.10165.2 chr19 - 1705 8 full-splice_match LILRA4 ENST00000291759.4 1944 8 0 239 no_subtype FALSE canonical NA NA 91 None 11 1 0 FALSE 0 0 NA A coding 499 1497 58 1554 PB.5231.1 chr9 + 1523 1 full-splice_match RRAGA ENST00000380527.2 1589 1 65 1 no_subtype FALSE canonical NA NA NA None 73 6 0 FALSE 0 0 NA C coding 313 939 201 1139 PB.871.2 chr1 + 1592 6 novel_not_in_catalog PRDX6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1248 None 42 13 1 TRUE 0 0 NA C coding 224 672 62 733 PB.683.1 chr1 - 2927 3 genic_intron novelGene_1246 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1673 None 2 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.871.1 chr1 + 881 5 full-splice_match PRDX6 ENST00000340385.5 1751 5 71 799 no_subtype FALSE canonical NA NA 607 None 6 1 0 FALSE 0 0 NA C coding 224 672 62 733 PB.7282.1 chr12 + 1930 1 genic_intron novelGene_1013 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10052.1 chr19 - 1627 3 full-splice_match ZNF296 ENST00000303809.6 1744 3 114 3 no_subtype FALSE canonical NA NA 399 None 6 3 0 FALSE 0 0 NA A coding 475 1425 102 1526 PB.2551.9 chr3 - 5670 7 novel_in_catalog CCNL1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 356 None 2 30 0 FALSE 0 0 NA C coding 172 516 54 569 PB.6512.1 chr11 - 1222 8 novel_not_in_catalog STARD10 novel NA NA NA NA no_subtype TRUE canonical NA NA 74 None 2 2 0 TRUE 0 0 NA A coding 291 873 188 1060 PB.3659.1 chr5 - 1081 5 full-splice_match CLTB ENST00000345807.6 1161 5 30 50 no_subtype FALSE canonical NA NA 363 None 4 3 0 FALSE 0 0 NA A coding 211 633 177 809 PB.7212.1 chr12 - 2922 22 novel_not_in_catalog APPL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 184 None 5 4 0 TRUE 0 0 NA B coding 622 1866 131 1996 PB.6850.4 chr12 - 3725 22 novel_not_in_catalog EPS8 novel NA NA NA NA no_subtype FALSE canonical NA NA 78 None 5 4 1 FALSE 0 0 NA B coding 683 2049 524 2572 PB.7212.3 chr12 - 3060 21 novel_not_in_catalog APPL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 172 None 2 7 1 TRUE 0 0 NA B coding 521 1563 484 2046 PB.7212.2 chr12 - 3126 22 novel_not_in_catalog APPL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 173 None 21 7 0 TRUE 0 0 NA B coding 664 1992 120 2111 PB.738.3 chr1 - 3445 11 novel_not_in_catalog UBQLN4 novel NA NA NA NA no_subtype FALSE canonical NA NA 141 None 6 10 0 FALSE 0 0 NA C coding 423 1269 504 1772 PB.7303.1 chr12 + 2056 2 novel_not_in_catalog RP1-267D11.6 novel NA NA NA NA no_subtype TRUE canonical NA NA 1168 None 2 18 0 FALSE 0 0 NA A coding 121 363 226 588 PB.1403.1 chr2 - 1686 13 full-splice_match TIA1 ENST00000433529.6 4647 13 63 2898 no_subtype FALSE canonical NA NA 174 None 11 0 0 FALSE 0 0 NA C coding 386 1158 149 1306 PB.29.1 chr1 - 4250 4 full-splice_match HES2 ENST00000377834.8 4262 4 4 8 no_subtype FALSE canonical NA NA 140 None 2 21 0 FALSE 0 0 NA A coding 173 519 96 614 PB.10788.1 chr22 + 1954 5 novel_in_catalog EP300 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1601 None 2 2 0 FALSE 0 0 NA B coding 429 1287 434 1720 PB.2918.2 chr4 + 2822 1 antisense novelGene_PLAC8_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2918.1 chr4 + 2845 2 antisense novelGene_PLAC8_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 25 None 2 18 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5605.2 chr9 + 2649 6 novel_not_in_catalog CACFD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1860 None 2 20 1 TRUE 0 0 NA B coding 172 516 55 570 PB.7061.1 chr12 + 1846 6 full-splice_match DTX3 ENST00000548804.5 2067 6 202 19 no_subtype FALSE canonical NA NA 1141 None 3 2 0 FALSE 0 0 NA C coding 340 1020 195 1214 PB.7061.3 chr12 + 1806 5 novel_in_catalog DTX3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1089 None 2 3 1 FALSE 0 0 NA C coding 350 1050 113 1162 PB.7061.2 chr12 + 3105 4 novel_in_catalog DTX3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 174 None 2 4 0 FALSE 0 0 NA C coding 271 813 195 1007 PB.7236.3 chr12 - 2784 1 incomplete-splice_match KCTD10 ENST00000228495.10 4163 7 1378 2 no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7236.2 chr12 - 3982 8 novel_not_in_catalog KCTD10 novel NA NA NA NA no_subtype FALSE canonical NA NA 107 None 2 26 0 TRUE 0 0 NA C coding 310 930 112 1041 PB.7236.1 chr12 - 3918 7 full-splice_match KCTD10 ENST00000228495.10 4163 7 243 2 no_subtype FALSE canonical NA NA 42 None 33 25 0 FALSE 0 0 NA C coding 313 939 40 978 PB.534.2 chr1 - 4222 15 full-splice_match WDR47 ENST00000369962.7 4199 15 -31 8 no_subtype FALSE canonical NA NA 245 None 7 6 0 FALSE 0 0 NA A coding 919 2757 255 3011 PB.1802.1 chr2 - 1483 5 full-splice_match SUMO1 ENST00000392246.6 1536 5 43 10 no_subtype FALSE canonical NA NA 126 None 9 5 0 FALSE 0 0 NA A coding 101 303 115 417 PB.7120.1 chr12 - 6923 36 novel_not_in_catalog ZFC3H1 novel NA NA NA NA no_subtype FALSE canonical NA NA 142 None 2 6 1 TRUE 0 0 NA A coding 1989 5967 214 6180 PB.2966.1 chr4 + 2651 11 full-splice_match METAP1 ENST00000296411.10 2791 11 127 13 no_subtype FALSE canonical NA NA 1004 None 36 8 0 FALSE 0 0 NA C coding 386 1158 8 1165 PB.2966.2 chr4 + 3290 12 novel_not_in_catalog METAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3171 None 7 12 1 TRUE 0 0 NA C coding 386 1158 31 1188 PB.7138.1 chr12 + 1497 1 antisense novelGene_CCDC59_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4675.3 chr7 + 3104 9 novel_not_in_catalog MKLN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2778 None 4 27 1 TRUE 0 0 NA C coding 170 510 9 518 PB.7558.2 chr13 + 2757 2 genic_intron novelGene_915 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2599 None 2 22 0 FALSE 0 0 NA A coding 52 156 188 343 PB.3700.8 chr5 - 2878 5 novel_not_in_catalog MGAT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 143 None 2 11 1 TRUE 0 0 NA B coding 445 1335 473 1807 PB.5806.1 chr10 - 1398 10 novel_not_in_catalog PBLD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 60 None 2 3 0 FALSE 0 0 NA A coding 288 864 120 983 PB.5729.9 chr10 + 1748 1 genic_intron novelGene_305 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A coding 23 69 235 303 PB.5629.3 chr9 - 2696 7 novel_in_catalog FBXW5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 49 None 2 10 1 FALSE 0 0 NA C coding 377 1131 73 1203 PB.1137.2 chr1 - 6775 45 full-splice_match HEATR1 ENST00000366582.7 8447 45 -8 1680 no_subtype FALSE canonical NA NA 91 None 7 8 0 FALSE 0 0 NA A coding 2144 6432 124 6555 PB.5815.1 chr10 - 1586 5 full-splice_match TACR2 ENST00000373306.4 2083 5 485 12 no_subtype FALSE canonical NA NA 451 None 9 1 0 FALSE 0 0 NA A coding 398 1194 60 1253 PB.843.1 chr1 - 6427 2 antisense novelGene_RCSD1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1693 None 3 34 1 FALSE 0 0 NA B coding 102 306 3176 3481 PB.7926.7 chr14 + 1499 1 novel_in_catalog PPP2R5C novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.843.2 chr1 - 2547 1 antisense novelGene_RCSD1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9939.1 chr19 + 1846 2 full-splice_match GPR42 ENST00000454971.2 1804 2 -55 13 no_subtype FALSE canonical NA NA 245 None 2 3 0 FALSE 0 0 NA A coding 346 1038 257 1294 PB.187.2 chr1 - 2697 1 incomplete-splice_match WASF2 ENST00000618852.4 5676 9 1569 1411 no_subtype FALSE canonical NA NA NA None 9 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8272.10 chr15 + 2746 4 genic_intron novelGene_775 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2504 None 2 13 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.7926.6 chr14 + 3604 14 novel_not_in_catalog PPP2R5C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1419 None 2 6 0 TRUE 0 0 NA C coding 514 1542 62 1603 PB.2457.1 chr3 - 2042 10 full-splice_match RPN1 ENST00000296255.7 2314 10 20 252 no_subtype FALSE canonical NA NA 290 None 32 5 0 FALSE 0 0 NA C coding 607 1821 30 1850 PB.7926.5 chr14 + 1561 13 novel_not_in_catalog PPP2R5C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1539 None 8 2 0 TRUE 0 0 NA C coding 449 1347 62 1408 PB.791.3 chr1 - 2604 9 novel_not_in_catalog SLAMF6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 119 None 2 10 0 TRUE 0 0 NA C coding 332 996 71 1066 PB.791.2 chr1 - 2666 8 full-splice_match SLAMF6 ENST00000368057.7 2712 8 35 11 no_subtype FALSE canonical NA NA 75 None 56 6 0 FALSE 0 0 NA C coding 332 996 27 1022 PB.6494.1 chr11 - 1388 2 genic_intron novelGene_645 novel NA NA NA NA no_subtype FALSE canonical NA NA 534 None 2 10 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6708.6 chr11 - 2034 8 full-splice_match HSPA8 ENST00000227378.7 2186 8 150 2 no_subtype FALSE canonical NA NA 63 None 9 2 0 FALSE 0 0 NA C coding 586 1758 39 1796 PB.6708.7 chr11 - 3030 6 novel_in_catalog HSPA8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 75 None 2 18 0 FALSE 0 0 NA C coding 392 1176 81 1256 PB.7548.1 chr13 + 3428 1 incomplete-splice_match RAP2A ENST00000245304.4 5487 2 915 1145 no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7926.3 chr14 + 1548 12 full-splice_match PPP2R5C ENST00000445439.7 1526 12 -25 3 no_subtype TRUE canonical NA NA 1326 None 39 5 0 FALSE 0 0 NA C coding 449 1347 74 1420 PB.6708.8 chr11 - 2780 6 novel_in_catalog HSPA8 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 73 None 2 27 0 FALSE 0 0 NA C coding 198 594 1949 2542 PB.6708.9 chr11 - 1518 8 novel_not_in_catalog HSPA8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 73 None 2 2 0 TRUE 0 0 NA C coding 401 1203 79 1281 PB.2154.2 chr3 - 3611 17 novel_not_in_catalog SETD2 novel NA NA NA NA no_subtype TRUE canonical NA NA 124 None 2 1 0 TRUE 0 0 NA A coding 958 2874 104 2977 PB.2094.2 chr3 - 2662 6 novel_in_catalog LRRFIP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 268 None 2 12 0 FALSE 0 0 NA C coding 115 345 391 735 PB.2107.1 chr3 + 1807 6 novel_in_catalog SLC25A38 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 978 None 2 4 0 FALSE 0 0 NA C coding 177 531 356 886 PB.11117.4 chrX + 1551 1 novel_in_catalog DOCK11 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7926.1 chr14 + 3688 14 full-splice_match PPP2R5C ENST00000334743.9 4328 14 -12 652 no_subtype FALSE canonical NA NA 1503 None 12 6 0 FALSE 0 0 NA C coding 524 1572 61 1632 PB.6429.8 chr11 + 2895 23 novel_not_in_catalog CAPN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2166 None 24 1 0 FALSE 0 0 NA C coding 714 2142 49 2190 PB.6429.9 chr11 + 2903 22 full-splice_match CAPN1 ENST00000279247.10 3007 22 87 17 no_subtype FALSE canonical NA NA 2174 None 222 1 0 FALSE 0 0 NA C coding 714 2142 57 2198 PB.9944.1 chr19 - 1644 5 incomplete-splice_match AD000671.6 ENST00000589807.1 1925 11 723 -442 5prime_fragment FALSE canonical NA NA 58 None 4 7 0 FALSE 0 0 NA A coding 355 1065 107 1171 PB.6429.7 chr11 + 2924 23 novel_not_in_catalog CAPN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2195 None 11 5 1 FALSE 0 0 NA C coding 714 2142 78 2219 PB.6429.4 chr11 + 2892 22 novel_in_catalog CAPN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2163 None 87 1 0 FALSE 0 0 NA C coding 714 2142 46 2187 PB.6429.5 chr11 + 2868 22 full-splice_match CAPN1 ENST00000524773.5 2960 22 79 13 no_subtype FALSE canonical NA NA 2139 None 23 1 0 FALSE 0 0 NA C coding 714 2142 22 2163 PB.6429.2 chr11 + 2878 22 full-splice_match CAPN1 ENST00000533820.5 3083 22 187 18 no_subtype FALSE canonical NA NA 2149 None 23 1 0 FALSE 0 0 NA C coding 714 2142 32 2173 PB.9944.4 chr19 - 2228 3 novel_in_catalog IGFLR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1479 None 4 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8902.1 chr17 + 6742 29 full-splice_match POLR2A ENST00000617998.4 6751 29 4 5 no_subtype TRUE canonical NA NA 5151 None 18 5 0 FALSE 0 0 NA A coding 1980 5940 396 6335 PB.7208.1 chr12 + 2616 1 intergenic novelGene_951 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2726.1 chr4 + 1814 5 incomplete-splice_match NSG1 ENST00000421177.6 4172 9 1894 464 internal_fragment TRUE canonical NA NA 454 None 2 10 0 FALSE 0 0 NA A coding 185 555 98 652 PB.853.3 chr1 - 3122 14 novel_not_in_catalog F5 novel NA NA NA NA no_subtype FALSE canonical NA NA 245 None 7 4 0 TRUE 0 0 NA A coding 1011 3033 88 3120 PB.9457.1 chr17 - 2475 10 full-splice_match WDR45B ENST00000392325.8 2587 10 91 21 no_subtype FALSE canonical NA NA 171 None 12 15 0 FALSE 0 0 NA A coding 344 1032 105 1136 PB.8268.3 chr15 + 3318 2 novel_in_catalog ZNF592 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 111 None 2 10 0 FALSE 0 0 NA B coding 758 2274 131 2404 PB.8268.2 chr15 + 3174 3 novel_in_catalog ZNF592 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2312 None 2 7 0 FALSE 0 0 NA B coding 863 2589 93 2681 PB.8268.1 chr15 + 3269 2 novel_in_catalog ZNF592 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 73 None 2 7 0 FALSE 0 0 NA B coding 758 2274 93 2366 PB.7075.1 chr12 + 3006 2 novel_not_in_catalog SRGAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1730 None 2 23 1 TRUE 0 0 NA B coding 117 351 528 878 PB.8346.2 chr16 + 1544 10 novel_not_in_catalog DECR2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1169 None 17 3 0 TRUE 0 0 NA B coding 292 876 102 977 PB.8268.5 chr15 + 5838 9 novel_not_in_catalog ZNF592 novel NA NA NA NA no_subtype FALSE canonical NA NA 5162 None 2 16 1 TRUE 0 0 NA B coding 732 2196 63 2258 PB.8346.1 chr16 + 1512 10 novel_not_in_catalog DECR2 novel NA NA NA NA no_subtype TRUE canonical NA NA 1137 None 3 4 0 TRUE 0 0 NA B coding 292 876 107 982 PB.645.1 chr1 - 1550 6 full-splice_match SF3B4 ENST00000271628.8 2085 6 532 3 no_subtype FALSE canonical NA NA 87 None 86 3 0 FALSE 0 0 NA A coding 424 1272 54 1325 PB.3091.1 chr4 + 2949 1 full-splice_match MIR4453 ENST00000604157.1 3000 1 29 22 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9154.1 chr17 + 1575 2 full-splice_match ARL4D ENST00000320033.4 1612 2 34 3 no_subtype FALSE canonical NA NA 101 None 13 7 0 FALSE 0 0 NA A coding 201 603 174 776 PB.7560.4 chr13 - 3311 17 novel_in_catalog TMTC4 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 69 None 3 9 0 FALSE 0 0 NA C coding 524 1572 687 2258 PB.3595.8 chr5 + 2859 12 novel_not_in_catalog G3BP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1401 None 4 14 1 FALSE 0 0 NA C coding 466 1398 208 1605 PB.548.2 chr1 - 2918 17 novel_in_catalog EPS8L3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 102 None 2 2 0 FALSE 0 0 NA B coding 441 1323 127 1449 PB.9577.1 chr18 - 2649 16 novel_not_in_catalog NARS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 67 None 199 11 2 TRUE 0 0 NA A coding 547 1641 58 1698 PB.9685.1 chr19 + 1605 2 genic_intron novelGene_35 novel NA NA NA NA no_subtype FALSE canonical NA NA 1518 None 3 12 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.2490.2 chr3 + 1650 4 full-splice_match NCK1 ENST00000288986.6 1937 4 50 237 no_subtype FALSE canonical NA NA 1019 None 9 5 0 FALSE 0 0 NA C coding 377 1131 81 1211 PB.1151.1 chr1 - 2835 1 antisense novelGene_RP11-269F20.1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1515.1 chr2 + 1822 1 novel_in_catalog CNOT11 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA C coding 174 522 59 580 PB.8572.1 chr16 + 1712 13 novel_not_in_catalog BCKDK novel NA NA NA NA no_subtype TRUE canonical NA NA 1272 None 44 4 2 TRUE 0 0 NA A coding 412 1236 179 1414 PB.6415.5 chr11 - 2795 3 full-splice_match EHD1 ENST00000466015.1 1290 3 -80 -1425 no_subtype FALSE canonical NA NA 561 None 4 10 0 FALSE 0 0 NA C coding 367 1101 158 1258 PB.7560.2 chr13 - 3031 15 novel_in_catalog TMTC4 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 121 None 8 9 0 FALSE 0 0 NA C coding 524 1572 407 1978 PB.6415.3 chr11 - 5697 4 novel_not_in_catalog EHD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2996 None 2 30 0 FALSE 0 0 NA C coding 305 915 3182 4096 PB.6415.2 chr11 - 1940 5 full-splice_match EHD1 ENST00000320631.7 4551 5 142 2469 no_subtype FALSE canonical NA NA 517 None 180 0 0 FALSE 0 0 NA C coding 534 1602 114 1715 PB.1667.1 chr2 - 3579 27 novel_not_in_catalog DPP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 252 None 18 3 0 FALSE 0 0 NA C coding 766 2298 247 2544 PB.10886.1 chrX - 1871 12 full-splice_match RBBP7 ENST00000380087.6 2333 12 142 320 no_subtype FALSE canonical NA NA 235 None 88 3 0 FALSE 0 0 NA C coding 425 1275 220 1494 PB.11152.8 chrX - 5477 4 genic_intron novelGene_1120 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 38 None 2 27 0 FALSE 0 0 NA A coding 234 702 2492 3193 PB.3444.1 chr5 - 2794 1 genic_intron novelGene_1096 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8664.2 chr16 + 3307 12 novel_not_in_catalog CES2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2301 None 2 13 2 TRUE 0 0 NA B coding 387 1161 1215 2375 PB.4066.1 chr6 - 3001 1 genic_intron novelGene_978 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 11 12 0 FALSE 0 0 NA A coding 111 333 1572 1904 PB.9468.2 chr18 + 3612 25 incomplete-splice_match SMCHD1 ENST00000320876.10 8821 48 -12 5221 3prime_fragment TRUE canonical NA NA 3398 None 3 1 0 FALSE 0 0 NA C coding 1087 3261 351 3611 PB.9468.3 chr18 + 7264 48 full-splice_match SMCHD1 ENST00000320876.10 8821 48 149 1408 no_subtype FALSE canonical NA NA 6182 None 6 10 0 FALSE 0 0 NA C coding 2005 6015 190 6204 PB.11152.4 chrX - 4268 9 full-splice_match ELF4 ENST00000335997.11 4145 9 -202 79 no_subtype FALSE canonical NA NA 299 None 9 15 0 FALSE 0 0 NA C coding 663 1989 509 2497 PB.9468.1 chr18 + 1422 9 incomplete-splice_match SMCHD1 ENST00000320876.10 8821 48 -15 7414 3prime_fragment FALSE canonical NA NA 1393 None 2 3 0 FALSE 0 0 NA C coding 356 1068 354 1421 PB.3773.6 chr6 - 2880 12 novel_not_in_catalog DEK novel NA NA NA NA no_subtype FALSE canonical NA NA 146 None 2 17 0 TRUE 0 0 NA C coding 365 1095 156 1250 PB.3773.5 chr6 - 2619 10 novel_in_catalog DEK novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 139 None 2 26 2 FALSE 0 0 NA C coding 312 936 149 1084 PB.2242.2 chr3 - 2843 18 novel_in_catalog PBRM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 122 None 3 3 0 FALSE 0 0 NA B coding 902 2706 138 2843 PB.3773.3 chr6 - 2645 10 incomplete-splice_match DEK ENST00000397239.7 3427 11 451 331 5prime_fragment FALSE canonical NA NA 142 None 8 14 0 FALSE 0 0 NA C coding 351 1053 70 1122 PB.3773.2 chr6 - 2809 11 full-splice_match DEK ENST00000397239.7 3427 11 299 319 no_subtype FALSE canonical NA NA 140 None 224 17 0 FALSE 0 0 NA C coding 375 1125 150 1274 PB.9798.1 chr19 + 1274 8 novel_not_in_catalog ASNA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 925 None 14 3 0 TRUE 0 0 NA A coding 348 1044 11 1054 PB.9138.1 chr17 - 3532 3 novel_not_in_catalog PTRF novel NA NA NA NA no_subtype FALSE canonical NA NA 620 None 14 20 0 TRUE 0 0 NA A coding 390 1170 150 1319 PB.4765.1 chr7 - 3712 22 novel_not_in_catalog PAXIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 128 None 2 14 0 TRUE 0 0 NA A coding 1069 3207 48 3254 PB.2117.1 chr3 + 2088 13 novel_not_in_catalog TRAK1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1454 None 2 10 0 TRUE 0 0 NA B coding 640 1920 23 1942 PB.2117.2 chr3 + 6007 10 novel_not_in_catalog TRAK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3191 None 2 27 0 FALSE 0 0 NA B coding 596 1788 2197 3984 PB.10700.1 chr22 - 2252 16 novel_not_in_catalog PES1 novel NA NA NA NA no_subtype TRUE canonical NA NA 90 None 2 4 0 FALSE 0 0 NA A coding 588 1764 67 1830 PB.9131.3 chr17 - 2711 10 novel_not_in_catalog GHDC novel NA NA NA NA no_subtype TRUE canonical NA NA 410 None 5 16 1 FALSE 0 0 NA B coding 530 1590 508 2097 PB.8080.3 chr15 - 1972 9 full-splice_match GABPB1 ENST00000380877.7 4816 9 281 2563 no_subtype FALSE canonical NA NA 143 None 16 1 0 FALSE 0 0 NA C coding 383 1149 144 1292 PB.3595.5 chr5 + 2804 12 full-splice_match G3BP1 ENST00000394123.7 10240 12 20 7416 no_subtype FALSE canonical NA NA 1319 None 72 13 1 FALSE 0 0 NA C coding 466 1398 126 1523 PB.8080.1 chr15 - 2770 9 full-splice_match GABPB1 ENST00000220429.12 2726 9 -45 1 no_subtype FALSE canonical NA NA 214 None 21 7 0 FALSE 0 0 NA C coding 395 1185 215 1399 PB.7229.8 chr12 - 5954 2 antisense novelGene_MIR4496_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 3238 None 2 32 1 FALSE 0 0 NA A coding 122 366 929 1294 PB.4533.1 chr7 + 1715 9 novel_not_in_catalog CPSF4 novel NA NA NA NA no_subtype FALSE canonical NA NA 776 None 2 8 0 FALSE 0 0 NA A coding 244 732 111 842 PB.7001.1 chr12 - 1744 1 incomplete-splice_match ATF7 ENST00000420353.6 6680 12 4933 4 no_subtype FALSE canonical NA NA NA None 4 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8080.4 chr15 - 2543 8 full-splice_match GABPB1 ENST00000396464.7 1401 8 35 -1177 no_subtype FALSE canonical NA NA 179 None 2 9 0 FALSE 0 0 NA C coding 348 1044 180 1223 PB.7062.6 chr12 + 2612 13 novel_in_catalog OS9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1841 None 4 7 1 FALSE 0 0 NA C coding 317 951 1014 1964 PB.805.1 chr1 + 1601 14 incomplete-splice_match NDUFS2 ENST00000367993.7 2042 15 435 6 internal_fragment FALSE canonical NA NA 1367 None 181 1 0 FALSE 0 0 NA A coding 463 1389 14 1402 PB.8421.1 chr16 + 5649 18 novel_not_in_catalog UBN1 novel NA NA NA NA no_subtype TRUE canonical NA NA 3376 None 2 12 0 TRUE 0 0 NA A coding 1134 3402 22 3423 PB.11140.1 chrX - 3344 1 novel_in_catalog THOC2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7062.7 chr12 + 2770 14 novel_in_catalog OS9 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2001 None 10 8 0 FALSE 0 0 NA C coding 372 1116 1009 2124 PB.8272.6 chr15 + 2744 9 incomplete-splice_match AKAP13 ENST00000559362.5 5459 15 2714 1 internal_fragment FALSE canonical NA NA 2611 None 5 4 0 FALSE 0 0 NA B coding 886 2658 87 2744 PB.5057.1 chr8 - 2631 9 novel_not_in_catalog SLC25A32 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 397 None 17 11 0 TRUE 0 0 NA B coding 315 945 244 1188 PB.8272.4 chr15 + 6878 8 novel_not_in_catalog AKAP13 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4565 None 2 15 1 TRUE 0 0 NA B coding 1303 3909 250 4158 PB.8272.5 chr15 + 5873 9 novel_not_in_catalog AKAP13 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4052 None 2 26 1 TRUE 0 0 NA B coding 1302 3906 226 4131 PB.8272.2 chr15 + 5560 17 novel_in_catalog AKAP13 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5427 None 6 5 1 FALSE 0 0 NA B coding 1785 5355 206 5560 PB.8272.3 chr15 + 3622 2 genic_intron novelGene_774 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3386 None 4 25 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9436.1 chr17 + 947 5 full-splice_match MRPL12 ENST00000333676.7 1028 5 68 13 no_subtype FALSE canonical NA NA 557 None 2 4 0 FALSE 0 0 NA A coding 162 486 186 671 PB.8272.1 chr15 + 5488 16 incomplete-splice_match AKAP13 ENST00000394518.6 13215 37 -110 7837 3prime_fragment FALSE canonical NA NA 5361 None 15 3 0 FALSE 0 0 NA B coding 1761 5283 206 5488 PB.5686.1 chr10 + 1515 10 full-splice_match PRPF18 ENST00000378572.7 1717 10 14 188 no_subtype FALSE canonical NA NA 1094 None 4 5 0 FALSE 0 0 NA C coding 342 1026 147 1172 PB.5686.2 chr10 + 1523 12 novel_not_in_catalog PRPF18 novel NA NA NA NA no_subtype FALSE canonical NA NA 1062 None 7 3 0 TRUE 0 0 NA C coding 342 1026 115 1140 PB.8621.2 chr16 - 2829 1 incomplete-splice_match NUDT21 ENST00000300291.9 4436 7 1599 9 no_subtype FALSE canonical NA NA NA None 3 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3700.6 chr5 - 2683 5 novel_not_in_catalog MGAT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 2 12 3 TRUE 0 0 NA B coding 445 1335 277 1611 PB.8621.1 chr16 - 1843 7 full-splice_match NUDT21 ENST00000300291.9 4436 7 46 2547 no_subtype TRUE canonical NA NA 243 None 11 5 0 FALSE 0 0 NA C coding 227 681 128 808 PB.4523.1 chr7 - 1929 12 novel_in_catalog ASNS novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 94 None 2 2 0 FALSE 0 0 NA A coding 561 1683 118 1800 PB.1143.1 chr1 + 1674 15 full-splice_match KMO ENST00000366559.8 5261 15 226 3361 no_subtype FALSE canonical NA NA 1345 None 4 7 0 FALSE 0 0 NA A coding 486 1458 86 1543 PB.3154.1 chr4 - 3122 1 genic_intron novelGene_1350 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6480.1 chr11 - 905 2 full-splice_match PTPRCAP ENST00000326294.3 1292 2 385 2 no_subtype FALSE canonical NA NA 66 None 23 4 0 FALSE 0 0 NA A coding 206 618 64 681 PB.7675.1 chr14 - 2953 2 genic_intron novelGene_394 novel NA NA NA NA no_subtype FALSE canonical NA NA 2360 None 17 19 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4145.4 chr6 - 2708 5 full-splice_match HBS1L ENST00000367822.9 2793 5 65 20 no_subtype FALSE canonical NA NA 171 None 6 7 0 FALSE 0 0 NA C coding 632 1896 129 2024 PB.7723.1 chr14 + 3299 2 full-splice_match FBXO34 ENST00000313833.4 3464 2 152 13 no_subtype FALSE canonical NA NA 83 None 84 10 0 FALSE 0 0 NA A coding 711 2133 94 2226 PB.4145.2 chr6 - 2699 17 full-splice_match HBS1L ENST00000367826.6 2703 17 1 3 no_subtype FALSE canonical NA NA 170 None 2 5 0 FALSE 0 0 NA C coding 642 1926 128 2053 PB.6708.4 chr11 - 2256 9 full-splice_match HSPA8 ENST00000534624.5 2463 9 197 10 no_subtype FALSE canonical NA NA 75 None 162 2 0 FALSE 0 0 NA C coding 646 1938 81 2018 PB.10841.16 chr22 - 6571 36 novel_not_in_catalog PLXNB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 94 None 3 18 2 TRUE 0 0 NA B coding 804 2412 3440 5851 PB.5984.1 chr10 - 4083 26 full-splice_match C10orf76 ENST00000370033.8 4119 26 26 10 no_subtype TRUE canonical NA NA 83 None 3 18 0 FALSE 0 0 NA A coding 689 2067 95 2161 PB.10841.15 chr22 - 6453 37 novel_not_in_catalog PLXNB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 144 None 3 18 1 TRUE 0 0 NA B coding 1841 5523 211 5733 PB.5675.15 chr10 + 5823 3 genic_intron novelGene_83 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5410 None 6 32 2 FALSE 0 0 NA A coding 114 342 5015 5356 PB.7608.28 chr14 + 1421 7 fusion TRAV20,TRAC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 873 None 2 4 1 TRUE 0 0 NA B coding 114 342 53 394 PB.8429.4 chr16 - 2762 22 incomplete-splice_match USP7 ENST00000381886.8 3587 31 1119 -294 5prime_fragment FALSE canonical NA NA 27 None 2 0 0 FALSE 0 0 NA B coding 696 2088 168 2255 PB.3375.1 chr5 + 3810 1 novel_in_catalog ARRDC3-AS1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 33 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8389.2 chr16 + 2913 6 novel_not_in_catalog SRRM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2670 None 2 9 1 TRUE 0 0 NA A coding 631 1893 489 2381 PB.9925.2 chr19 + 4637 10 novel_not_in_catalog GPI novel NA NA NA NA no_subtype TRUE canonical NA NA 2382 None 3 31 0 TRUE 0 0 NA C coding 326 978 19 996 PB.9925.3 chr19 + 3888 2 novel_not_in_catalog GPI novel NA NA NA NA no_subtype FALSE canonical NA NA 1633 None 4 28 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.8429.2 chr16 - 3633 25 novel_not_in_catalog USP7 novel NA NA NA NA no_subtype FALSE canonical NA NA 15 None 2 6 2 TRUE 0 0 NA B coding 647 1941 40 1980 PB.9925.1 chr19 + 1981 18 full-splice_match GPI ENST00000356487.9 2210 18 223 6 no_subtype FALSE canonical NA NA 1559 None 173 7 0 FALSE 0 0 NA C coding 558 1674 19 1692 PB.9290.6 chr17 + 2023 1 incomplete-splice_match MAP3K3 ENST00000361357.7 4818 17 2793 3 no_subtype FALSE canonical NA NA NA None 5 11 0 FALSE 0 0 NA B coding 171 513 1117 1629 PB.6437.1 chr11 + 1356 1 full-splice_match MALAT1 ENST00000534336.1 8708 1 6979 373 no_subtype FALSE canonical NA NA NA None 9 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.944.8 chr1 + 2665 1 incomplete-splice_match NEK7 ENST00000367385.8 4149 10 1439 46 no_subtype FALSE canonical NA NA NA None 4 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.944.6 chr1 + 3151 1 genic_intron novelGene_1371 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 21 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.360.1 chr1 - 2658 18 novel_in_catalog TTC39A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 123 None 4 6 0 FALSE 0 0 NA A coding 577 1731 83 1813 PB.944.4 chr1 + 2696 12 novel_not_in_catalog NEK7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1238 None 3 6 0 TRUE 0 0 NA C coding 295 885 321 1205 PB.944.3 chr1 + 4086 11 novel_not_in_catalog NEK7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1082 None 22 12 0 TRUE 0 0 NA C coding 302 906 285 1190 PB.944.2 chr1 + 2702 11 novel_not_in_catalog NEK7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1244 None 5 6 0 TRUE 0 0 NA C coding 295 885 327 1211 PB.944.1 chr1 + 2967 9 novel_not_in_catalog NEK7 novel NA NA NA NA no_subtype FALSE canonical NA NA 826 None 17 12 0 TRUE 0 0 NA C coding 277 831 238 1068 PB.6356.7 chr11 + 3364 12 novel_not_in_catalog CD6 novel NA NA NA NA no_subtype FALSE canonical NA NA 2248 None 4 4 0 FALSE 0 0 NA C coding 535 1605 102 1706 PB.11219.2 chrX + 1583 15 full-splice_match DKC1 ENST00000369550.9 2577 15 117 877 no_subtype FALSE canonical NA NA 1569 None 2 3 0 FALSE 0 0 NA C coding 496 1488 94 1581 PB.5112.2 chr8 - 2793 2 full-splice_match MTSS1 ENST00000520771.1 3548 2 753 2 no_subtype FALSE canonical NA NA 78 None 5 15 0 FALSE 0 0 NA C coding 195 585 192 776 PB.7917.2 chr14 + 1703 3 genic_intron novelGene_911 novel NA NA NA NA no_subtype FALSE canonical NA NA 1495 None 2 15 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.943.1 chr1 - 3259 1 incomplete-splice_match DENND1B ENST00000391979.6 6960 9 1347 2355 no_subtype FALSE canonical NA NA NA None 4 28 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2437.1 chr3 - 1978 1 incomplete-splice_match MYLK ENST00000418370.6 7282 3 5299 6 no_subtype FALSE canonical NA NA NA None 5 8 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7852.1 chr14 - 2630 1 genic_intron novelGene_819 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5150.2 chr8 + 1452 10 novel_in_catalog GSDMD novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1064 None 2 3 0 FALSE 0 0 NA B coding 399 1197 108 1304 PB.6121.2 chr11 + 1555 9 novel_not_in_catalog CD151 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 866 None 2 10 1 TRUE 0 0 NA C coding 253 759 165 923 PB.6121.1 chr11 + 1485 8 full-splice_match CD151 ENST00000397421.5 1486 8 0 1 no_subtype FALSE canonical NA NA 784 None 163 7 1 FALSE 0 0 NA C coding 253 759 83 841 PB.5150.1 chr8 + 1702 12 novel_not_in_catalog GSDMD novel NA NA NA NA no_subtype TRUE canonical NA NA 1314 None 20 7 0 FALSE 0 0 NA B coding 484 1452 103 1554 PB.8454.2 chr16 + 2681 24 novel_not_in_catalog PDXDC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2363 None 4 1 0 TRUE 0 0 NA C coding 799 2397 24 2420 PB.1436.2 chr2 + 1728 4 full-splice_match DOK1 ENST00000340004.6 1722 4 -11 5 no_subtype FALSE canonical NA NA 489 None 2 4 0 FALSE 0 0 NA C coding 267 801 493 1293 PB.6389.3 chr11 - 3942 22 novel_not_in_catalog NXF1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 112 None 4 18 2 TRUE 0 0 NA C coding 356 1068 85 1152 PB.4177.1 chr6 + 1924 2 full-splice_match STX11 ENST00000367568.4 1926 2 -6 8 no_subtype FALSE canonical NA NA 184 None 12 3 0 FALSE 0 0 NA C coding 287 861 190 1050 PB.6389.1 chr11 - 2705 3 novel_not_in_catalog ZBTB3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 203 None 19 11 0 TRUE 0 0 NA A coding 524 1572 255 1826 PB.6389.7 chr11 - 3637 18 incomplete-splice_match NXF1 ENST00000531709.6 4128 20 440 51 5prime_fragment FALSE canonical NA NA 43 None 5 9 0 FALSE 0 0 NA C coding 219 657 86 742 PB.6389.6 chr11 - 4077 20 full-splice_match NXF1 ENST00000531709.6 4128 20 0 51 no_subtype FALSE canonical NA NA 142 None 82 9 0 FALSE 0 0 NA C coding 356 1068 115 1182 PB.6212.1 chr11 + 4363 12 full-splice_match FAR1 ENST00000354817.7 5264 12 51 850 no_subtype FALSE canonical NA NA 1478 None 27 19 0 FALSE 0 0 NA A coding 515 1545 94 1638 PB.7915.3 chr14 + 2802 15 novel_in_catalog EVL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2583 None 4 8 1 FALSE 0 0 NA C coding 386 1158 80 1237 PB.10661.1 chr22 - 2849 18 novel_in_catalog TOP3B novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 166 None 4 1 0 FALSE 0 0 NA C coding 726 2178 587 2764 PB.10661.2 chr22 - 2853 18 full-splice_match TOP3B ENST00000357179.9 2863 18 3 7 no_subtype FALSE canonical NA NA 84 None 11 2 0 FALSE 0 0 NA C coding 862 2586 183 2768 PB.7732.1 chr14 + 903 11 full-splice_match PSMA3 ENST00000216455.8 970 11 66 1 no_subtype FALSE canonical NA NA 747 None 5 1 1 FALSE 0 0 NA A coding 255 765 25 789 PB.10661.4 chr22 - 3307 1 novel_in_catalog TOP3B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA C coding 108 324 2162 2485 PB.7766.5 chr14 + 2720 3 novel_not_in_catalog FUT8 novel NA NA NA NA no_subtype FALSE canonical NA NA 2048 None 2 13 1 TRUE 0 0 NA B coding 166 498 1515 2012 PB.7814.4 chr14 + 1631 9 novel_not_in_catalog FCF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1306 None 2 15 2 TRUE 0 0 NA B coding 198 594 27 620 PB.7451.7 chr13 - 3498 9 full-splice_match ELF1 ENST00000635415.1 2116 9 24 -1406 no_subtype FALSE canonical NA NA 18 None 36 5 0 FALSE 0 0 NA C coding 619 1857 247 2103 PB.10140.3 chr19 - 642 1 novel_in_catalog FPR1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 1 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7766.3 chr14 + 2853 12 novel_not_in_catalog FUT8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2181 None 2 6 1 TRUE 0 0 NA B coding 575 1725 421 2145 PB.7766.2 chr14 + 2964 13 novel_not_in_catalog FUT8 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2290 None 2 9 1 TRUE 0 0 NA B coding 575 1725 530 2254 PB.7086.1 chr12 + 1314 2 genic_intron novelGene_611 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 400 None 3 10 1 FALSE 0 0 NA A coding 106 318 992 1309 PB.8906.1 chr17 + 1391 7 full-splice_match MPDU1 ENST00000250124.10 1601 7 201 9 no_subtype FALSE canonical NA NA 633 None 9 3 0 FALSE 0 0 NA A coding 247 741 16 756 PB.11113.1 chrX + 2865 2 genic RP13-266I11.1 novel NA NA NA NA no_subtype FALSE canonical NA NA 590 None 3 25 0 FALSE 0 0 NA A coding 441 1323 223 1545 PB.1861.2 chr2 + 3070 7 novel_in_catalog CNOT9 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 754 None 2 14 0 FALSE 0 0 NA C coding 215 645 116 760 PB.1489.1 chr2 + 3356 25 novel_in_catalog FER1L5 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2947 None 4 5 1 FALSE 0 0 NA A coding 912 2736 225 2960 PB.9410.9 chr17 - 2731 14 novel_not_in_catalog CYTH1 novel NA NA NA NA no_subtype TRUE canonical NA NA 95 None 6 15 1 TRUE 0 0 NA C coding 373 1119 74 1192 PB.9410.8 chr17 - 3330 13 novel_in_catalog CYTH1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 122 None 2 8 1 FALSE 0 0 NA C coding 399 1197 95 1291 PB.6427.1 chr11 + 1996 5 novel_not_in_catalog MRPL49 novel NA NA NA NA no_subtype FALSE canonical NA NA 1352 None 93 17 1 TRUE 0 0 NA A coding 166 498 27 524 PB.2109.1 chr3 + 918 4 full-splice_match EIF1B ENST00000232905.3 1010 4 58 34 no_subtype FALSE canonical NA NA 497 None 2 3 0 FALSE 0 0 NA A coding 113 339 201 539 PB.1163.1 chr1 - 2876 3 novel_not_in_catalog RP11-488L18.4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 160 None 2 32 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.2458.1 chr3 + 2179 6 full-splice_match RAB7A ENST00000265062.7 2244 6 61 4 no_subtype FALSE canonical NA NA 713 None 55 9 0 FALSE 0 0 NA C coding 207 621 186 806 PB.7469.2 chr13 - 2543 12 novel_in_catalog ZC3H13 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 325 None 2 2 0 FALSE 0 0 NA B coding 736 2208 335 2542 PB.2519.1 chr3 + 1469 11 full-splice_match CPB1 ENST00000282957.8 1458 11 -12 1 no_subtype FALSE canonical NA NA 1101 None 2 1 0 FALSE 0 0 NA A coding 417 1251 36 1286 PB.2374.5 chr3 + 2781 2 novel_not_in_catalog SLC35A5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2024 None 2 31 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.2374.4 chr3 + 2904 9 novel_not_in_catalog SLC35A5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2663 None 3 10 1 TRUE 0 0 NA B coding 439 1317 191 1507 PB.6228.1 chr11 - 4558 2 genic USH1C novel NA NA NA NA no_subtype FALSE canonical NA NA 3699 None 2 21 1 TRUE 0 0 NA B coding 97 291 265 555 PB.2374.2 chr3 + 2850 9 novel_not_in_catalog SLC35A5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2609 None 27 7 0 TRUE 0 0 NA B coding 424 1272 182 1453 PB.2374.1 chr3 + 2850 9 novel_not_in_catalog SLC35A5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2608 None 43 7 0 TRUE 0 0 NA B coding 424 1272 181 1452 PB.10992.2 chrX + 4120 6 novel_not_in_catalog TSR2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3050 None 3 25 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.7708.1 chr14 + 1679 11 full-splice_match STYX ENST00000354586.4 4857 11 -9 3187 no_subtype FALSE canonical NA NA 900 None 2 12 0 FALSE 0 0 NA A coding 223 669 303 971 PB.7172.1 chr12 - 3300 6 full-splice_match USP44 ENST00000393091.6 3161 6 30 -169 no_subtype FALSE canonical NA NA 44 None 4 19 0 FALSE 0 0 NA C coding 709 2127 124 2250 PB.5675.12 chr10 + 1716 2 genic_intron novelGene_80 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 638 None 4 5 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6915.1 chr12 + 5939 20 full-splice_match ANO6 ENST00000320560.12 5975 20 -27 63 no_subtype FALSE canonical NA NA 2755 None 6 18 0 FALSE 0 0 NA A coding 910 2730 230 2959 PB.3591.1 chr5 + 5729 13 novel_not_in_catalog SLC36A1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5621 None 2 35 2 TRUE 0 0 NA B coding 476 1428 228 1655 PB.8708.1 chr16 + 3502 10 novel_in_catalog VPS4A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2675 None 2 43 0 FALSE 0 0 NA C coding 364 1092 175 1266 PB.4167.1 chr6 + 3154 8 novel_not_in_catalog PEX3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2851 None 3 16 0 TRUE 0 0 NA A coding 193 579 184 762 PB.10780.1 chr22 + 1917 1 incomplete-splice_match TNRC6B ENST00000301923.13 15958 24 10896 3146 no_subtype FALSE canonical NA NA NA None 5 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2602.1 chr3 - 1708 1 full-splice_match LRRFIP1P1 ENST00000498774.1 2246 1 -176 714 no_subtype FALSE canonical NA NA NA None 10 4 0 FALSE 0 0 NA C coding 121 363 300 662 PB.1861.1 chr2 + 1827 8 full-splice_match CNOT9 ENST00000273064.10 4079 8 306 1946 no_subtype FALSE canonical NA NA 800 None 22 4 0 FALSE 0 0 NA C coding 299 897 70 966 PB.6789.6 chr12 + 1412 1 incomplete-splice_match CD4 ENST00000011653.8 3114 10 1694 9 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA C coding 130 390 992 1381 PB.6548.1 chr11 + 4318 13 full-splice_match CAPN5 ENST00000278559.7 4397 13 73 6 no_subtype FALSE canonical NA NA 1856 None 8 8 0 FALSE 0 0 NA C coding 640 1920 117 2036 PB.6548.2 chr11 + 4382 12 novel_in_catalog CAPN5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1921 None 14 8 0 FALSE 0 0 NA C coding 640 1920 182 2101 PB.4644.1 chr7 - 2481 15 full-splice_match IMPDH1 ENST00000348127.10 2479 15 17 -19 no_subtype FALSE canonical NA NA 210 None 5 8 0 FALSE 0 0 NA C coding 563 1689 65 1753 PB.7544.3 chr13 + 5546 14 novel_not_in_catalog DNAJC3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3574 None 10 45 1 TRUE 0 0 NA B coding 504 1512 96 1607 PB.4644.2 chr7 - 2666 16 novel_not_in_catalog IMPDH1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 230 None 3 6 0 FALSE 0 0 NA C coding 445 1335 606 1940 PB.9896.1 chr19 - 1408 10 novel_not_in_catalog MEF2B novel NA NA NA NA no_subtype TRUE canonical NA NA 59 None 3 5 1 TRUE 0 0 NA A coding 368 1104 89 1192 PB.2420.1 chr3 + 2713 8 novel_not_in_catalog CD86 novel NA NA NA NA no_subtype FALSE canonical NA NA 1017 None 44 11 0 TRUE 0 0 NA B coding 329 987 125 1111 PB.2594.1 chr3 - 4123 5 full-splice_match NCEH1 ENST00000475381.5 4687 5 154 410 no_subtype FALSE canonical NA NA 218 None 13 16 0 FALSE 0 0 NA A coding 408 1224 81 1304 PB.7544.2 chr13 + 1395 12 novel_not_in_catalog DNAJC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1325 None 4 3 0 TRUE 0 0 NA B coding 426 1278 118 1395 PB.9712.10 chr19 - 3561 30 novel_not_in_catalog C3 novel NA NA NA NA no_subtype FALSE canonical NA NA 208 None 5 1 1 TRUE 0 0 NA B coding 794 2382 5 2386 PB.8592.1 chr16 + 4047 32 full-splice_match PHKB ENST00000566044.5 3829 32 33 -251 no_subtype FALSE canonical NA NA 3279 None 6 3 1 FALSE 0 0 NA C coding 1086 3258 157 3414 PB.433.2 chr1 - 2834 11 full-splice_match ZRANB2 ENST00000254821.10 2821 11 -18 5 no_subtype FALSE canonical NA NA 90 None 54 7 0 FALSE 0 0 NA C coding 320 960 35 994 PB.433.3 chr1 - 3905 10 novel_in_catalog ZRANB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 96 None 5 13 0 FALSE 0 0 NA C coding 314 942 41 982 PB.342.3 chr1 - 2722 12 novel_in_catalog GPBP1L1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 71 None 31 7 0 FALSE 0 0 NA C coding 474 1422 1169 2590 PB.1446.1 chr2 - 3250 15 full-splice_match GGCX ENST00000233838.8 7569 15 8 4311 no_subtype FALSE canonical NA NA 116 None 27 6 0 FALSE 0 0 NA A coding 758 2274 74 2347 PB.342.1 chr1 - 2772 12 full-splice_match GPBP1L1 ENST00000290795.7 3599 12 3 824 no_subtype FALSE canonical NA NA 122 None 91 6 0 FALSE 0 0 NA C coding 474 1422 1220 2641 PB.455.1 chr1 - 2559 13 novel_not_in_catalog MCOLN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 316 None 3 8 1 FALSE 0 0 NA B coding 324 972 810 1781 PB.8149.1 chr15 + 2828 2 antisense novelGene_OAZ2_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2781 None 3 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.342.4 chr1 - 1845 1 genic_intron novelGene_450 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9029.2 chr17 + 1999 1 incomplete-splice_match CPD ENST00000225719.8 9394 21 6080 1316 no_subtype FALSE canonical NA NA NA None 5 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9029.1 chr17 + 6425 17 incomplete-splice_match CPD ENST00000225719.8 9394 21 1655 1314 internal_fragment FALSE canonical NA NA 2337 None 2 21 1 FALSE 0 0 NA B coding 840 2520 42 2561 PB.9712.13 chr19 - 5143 42 novel_not_in_catalog C3 novel NA NA NA NA no_subtype TRUE canonical NA NA 178 None 53 3 1 TRUE 0 0 NA B coding 1288 3864 105 3968 PB.6395.1 chr11 - 1730 2 novel_not_in_catalog ATL3 novel NA NA NA NA no_subtype FALSE canonical NA NA 429 None 7 14 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.6395.2 chr11 - 2992 13 full-splice_match ATL3 ENST00000398868.7 7135 13 249 3894 no_subtype FALSE canonical NA NA 74 None 9 10 0 FALSE 0 0 NA C coding 541 1623 29 1651 PB.6080.1 chr10 - 1475 6 incomplete-splice_match CTBP2 ENST00000531469.5 1918 11 767 -324 5prime_fragment FALSE canonical NA NA 85 None 2 2 0 FALSE 0 0 NA A coding 185 555 301 855 PB.9466.1 chr18 - 2832 12 full-splice_match YES1 ENST00000314574.4 4441 12 -55 1664 no_subtype FALSE canonical NA NA 180 None 2 8 0 FALSE 0 0 NA A coding 543 1629 189 1817 PB.4456.4 chr7 + 3390 37 novel_not_in_catalog ELN novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2148 None 2 25 5 TRUE 0 0 NA B coding 102 306 671 976 PB.7066.1 chr12 + 1139 6 full-splice_match TSFM ENST00000454289.7 2192 6 201 852 no_subtype FALSE canonical NA NA 583 None 2 1 0 FALSE 0 0 NA C coding 325 975 13 987 PB.4456.2 chr7 + 3332 37 novel_not_in_catalog ELN novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2087 None 11 24 5 TRUE 0 0 NA B coding 609 1827 18 1844 PB.7802.1 chr14 + 1547 3 full-splice_match ACOT2 ENST00000613168.1 1553 3 0 6 no_subtype FALSE canonical NA NA 802 None 7 3 0 FALSE 0 0 NA A coding 463 1389 17 1405 PB.9845.1 chr19 + 1894 6 full-splice_match HSH2D ENST00000613986.4 1957 6 51 12 no_subtype FALSE canonical NA NA 540 None 16 1 0 FALSE 0 0 NA C coding 352 1056 67 1122 PB.4861.1 chr8 - 2541 19 novel_not_in_catalog INTS9 novel NA NA NA NA no_subtype TRUE canonical NA NA 94 None 4 3 0 TRUE 0 0 NA A coding 658 1974 86 2059 PB.9845.3 chr19 + 1795 6 full-splice_match HSH2D ENST00000593031.1 585 6 -8 -1202 no_subtype FALSE canonical NA NA 473 None 2 1 0 FALSE 0 0 NA C coding 327 981 75 1055 PB.9845.2 chr19 + 1659 6 novel_not_in_catalog HSH2D novel NA NA NA NA no_subtype FALSE non_canonical NA NA 483 None 14 1 0 FALSE 0 0 NA C coding 272 816 250 1065 PB.9845.4 chr19 + 1833 6 novel_not_in_catalog HSH2D novel NA NA NA NA no_subtype FALSE non_canonical NA NA 479 None 2 3 0 TRUE 0 0 NA C coding 272 816 246 1061 PB.10640.2 chr22 - 2864 10 novel_in_catalog TRMT2A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 342 None 21 7 0 FALSE 0 0 NA C coding 299 897 1707 2603 PB.1463.1 chr2 + 1568 3 full-splice_match AC015971.2 ENST00000424788.1 1147 3 -21 -400 no_subtype FALSE canonical NA NA 288 None 4 8 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1495.7 chr2 + 5336 12 novel_not_in_catalog ZAP70 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3684 None 2 37 3 TRUE 0 0 NA C coding 318 954 194 1147 PB.1495.4 chr2 + 4011 13 novel_not_in_catalog ZAP70 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3528 None 2 17 2 TRUE 0 0 NA C coding 319 957 194 1150 PB.1495.5 chr2 + 3846 12 novel_in_catalog ZAP70 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3363 None 11 14 0 FALSE 0 0 NA C coding 237 711 2774 3484 PB.9049.1 chr17 + 1502 14 novel_not_in_catalog PSMD11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1293 None 108 1 1 TRUE 0 0 NA C coding 422 1266 24 1289 PB.10316.1 chr20 + 3725 18 novel_not_in_catalog TM9SF4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1765 None 110 9 0 TRUE 0 0 NA B coding 625 1875 38 1912 PB.9049.3 chr17 + 1560 14 novel_not_in_catalog PSMD11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1336 None 3 5 0 TRUE 0 0 NA C coding 422 1266 33 1298 PB.9049.2 chr17 + 1636 13 full-splice_match PSMD11 ENST00000457654.6 2159 13 11 512 no_subtype FALSE canonical NA NA 1165 None 9 10 0 FALSE 0 0 NA C coding 422 1266 40 1305 PB.1803.1 chr2 + 1724 14 novel_not_in_catalog NOP58 novel NA NA NA NA no_subtype FALSE canonical NA NA 1587 None 51 2 1 FALSE 0 0 NA B coding 469 1407 182 1588 PB.926.2 chr1 - 2909 16 full-splice_match IVNS1ABP ENST00000459929.5 3657 16 -4 752 no_subtype FALSE canonical NA NA 325 None 13 1 0 FALSE 0 0 NA C coding 424 1272 1367 2638 PB.9234.1 chr17 + 2695 17 novel_in_catalog SPATA20 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2338 None 9 1 0 FALSE 0 0 NA A coding 786 2358 149 2506 PB.1495.9 chr2 + 3955 12 novel_not_in_catalog ZAP70 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3471 None 2 22 2 TRUE 0 0 NA C coding 237 711 2882 3592 PB.6016.4 chr10 - 2729 1 novel_in_catalog XPNPEP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1568.1 chr2 + 1766 1 antisense novelGene_TFCP2L1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 12 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3770.1 chr6 + 3129 1 genic_intron novelGene_169 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6606.1 chr11 + 3248 1 incomplete-splice_match YAP1 ENST00000345877.6 5284 8 2026 11 no_subtype FALSE canonical NA NA NA None 4 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8520.1 chr16 + 5737 22 novel_not_in_catalog KIAA0556 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3948 None 2 30 3 TRUE 0 0 NA A coding 1296 3888 114 4001 PB.11134.2 chrX + 3539 1 incomplete-splice_match ZBTB33 ENST00000326624.2 5211 2 1669 4 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C coding 108 324 252 575 PB.6068.4 chr10 + 2578 7 novel_in_catalog BUB3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1037 None 6 7 0 FALSE 0 0 NA C coding 328 984 67 1050 PB.789.1 chr1 + 3223 3 novel_not_in_catalog VANGL2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 36 None 5 25 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.4499.1 chr7 + 2025 1 novel_in_catalog AKAP9 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1072.1 chr1 + 2001 3 full-splice_match DEGS1 ENST00000323699.8 2101 3 93 7 no_subtype FALSE canonical NA NA 898 None 43 7 0 FALSE 0 0 NA A coding 323 969 74 1042 PB.7522.1 chr13 - 2875 1 genic_intron novelGene_692 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 14 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8613.1 chr16 + 4072 10 novel_not_in_catalog FTO novel NA NA NA NA no_subtype FALSE canonical NA NA 1373 None 21 12 0 TRUE 0 0 NA A coding 505 1515 10 1524 PB.2924.1 chr4 + 3163 1 novel_in_catalog MRPS18C novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 31 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4676.1 chr7 - 2721 2 antisense novelGene_MKLN1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1335 None 2 14 1 FALSE 0 0 NA A coding 64 192 261 452 PB.8613.5 chr16 - 2878 1 antisense novelGene_FTO_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8500.1 chr16 - 3421 1 antisense novelGene_UBFD1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1859.3 chr2 + 1627 9 novel_not_in_catalog SLC11A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 860 None 16 10 0 FALSE 0 0 NA C coding 270 810 66 875 PB.10795.4 chr22 + 3064 19 novel_not_in_catalog ACO2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2655 None 2 4 1 FALSE 0 0 NA C coding 498 1494 30 1523 PB.10795.5 chr22 + 2748 18 novel_in_catalog ACO2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2344 None 18 2 0 FALSE 0 0 NA C coding 747 2241 236 2476 PB.10795.6 chr22 + 2666 17 novel_in_catalog ACO2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2177 None 4 2 0 FALSE 0 0 NA C coding 747 2241 69 2309 PB.10795.1 chr22 + 2725 18 full-splice_match ACO2 ENST00000216254.8 2741 18 -7 23 no_subtype FALSE canonical NA NA 2237 None 346 2 0 FALSE 0 0 NA C coding 780 2340 30 2369 PB.10795.2 chr22 + 2972 18 novel_not_in_catalog ACO2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2562 None 15 4 0 FALSE 0 0 NA C coding 498 1494 14 1507 PB.10795.3 chr22 + 3044 18 novel_not_in_catalog ACO2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2635 None 2 8 2 TRUE 0 0 NA C coding 498 1494 30 1523 PB.7552.1 chr13 - 3113 23 novel_not_in_catalog SLC15A1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 81 None 2 16 2 TRUE 0 0 NA A coding 676 2028 160 2187 PB.4485.1 chr7 - 3372 8 novel_not_in_catalog SEMA3C novel NA NA NA NA no_subtype FALSE canonical NA NA 117 None 2 12 0 TRUE 0 0 NA A coding 263 789 228 1016 PB.8740.4 chr16 - 1429 8 novel_not_in_catalog GLG1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 202 None 2 17 4 TRUE 0 0 NA C coding 115 345 1083 1427 PB.4809.3 chr8 + 5495 36 novel_not_in_catalog PCM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 5379 None 2 0 0 TRUE 0 0 NA A coding 1790 5370 33 5402 PB.8740.6 chr16 - 3722 27 full-splice_match GLG1 ENST00000205061.9 8261 27 6 4533 no_subtype FALSE canonical NA NA 452 None 5 3 0 FALSE 0 0 NA C coding 1203 3609 15 3623 PB.1914.2 chr2 + 2542 21 incomplete-splice_match PSMD1 ENST00000308696.10 3326 25 76 708 3prime_fragment FALSE canonical NA NA 2474 None 8 0 0 FALSE 0 0 NA C coding 818 2454 87 2540 PB.8740.1 chr16 - 1131 1 incomplete-splice_match GLG1 ENST00000205061.9 8261 27 6919 212 no_subtype FALSE canonical NA NA NA None 16 5 0 FALSE 0 0 NA C coding 115 345 785 1129 PB.8740.2 chr16 - 1641 5 novel_not_in_catalog GLG1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 209 None 2 9 2 TRUE 0 0 NA C coding 156 468 1087 1554 PB.8740.3 chr16 - 1619 6 novel_not_in_catalog GLG1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 209 None 4 10 3 TRUE 0 0 NA C coding 156 468 1077 1544 PB.2394.1 chr3 - 2826 1 novel_in_catalog ZBTB20 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8140.1 chr15 - 923 5 full-splice_match FAM96A ENST00000300030.7 1105 5 180 2 no_subtype FALSE canonical NA NA 194 None 2 2 0 FALSE 0 0 NA A coding 160 480 71 550 PB.3386.2 chr5 - 3225 3 novel_not_in_catalog ELL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1426 None 6 13 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.3386.1 chr5 - 3540 12 full-splice_match ELL2 ENST00000237853.8 6046 12 198 2308 no_subtype TRUE canonical NA NA 299 None 24 10 0 FALSE 0 0 NA C coding 640 1920 153 2072 PB.2135.1 chr3 + 803 3 full-splice_match CLEC3B ENST00000296130.4 936 3 123 10 no_subtype FALSE canonical NA NA 265 None 2 0 0 FALSE 0 0 NA A coding 202 606 58 663 PB.9355.1 chr17 - 3293 19 full-splice_match HID1 ENST00000425042.6 3271 19 -25 3 no_subtype FALSE canonical NA NA 169 None 11 8 0 FALSE 0 0 NA C coding 788 2364 104 2467 PB.9355.2 chr17 - 3714 19 novel_not_in_catalog HID1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 159 None 3 38 0 FALSE 0 0 NA C coding 730 2190 94 2283 PB.6367.1 chr11 + 5645 24 novel_not_in_catalog MYRF novel NA NA NA NA no_subtype TRUE canonical NA NA 3191 None 3 18 2 TRUE 0 0 NA A coding 1038 3114 156 3269 PB.10214.4 chr20 + 3714 11 novel_not_in_catalog RBCK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3101 None 3 18 1 FALSE 0 0 NA C coding 269 807 442 1248 PB.10214.6 chr20 + 3625 11 novel_in_catalog RBCK1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3012 None 13 19 0 FALSE 0 0 NA C coding 269 807 422 1228 PB.10214.1 chr20 + 2332 12 full-splice_match RBCK1 ENST00000356286.9 2774 12 437 5 no_subtype FALSE canonical NA NA 1720 None 78 9 0 FALSE 0 0 NA C coding 510 1530 269 1798 PB.10214.2 chr20 + 2615 12 novel_not_in_catalog RBCK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2002 None 2 8 0 FALSE 0 0 NA C coding 253 759 460 1218 PB.10214.3 chr20 + 2580 12 novel_not_in_catalog RBCK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1967 None 2 15 1 FALSE 0 0 NA C coding 412 1236 447 1682 PB.6568.2 chr11 - 7169 1 genic_intron novelGene_762 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 33 0 FALSE 0 0 NA A coding 126 378 5518 5895 PB.5935.1 chr10 + 2852 2 genic_intron novelGene_869 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 641 None 2 19 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6919.1 chr12 - 2714 1 incomplete-splice_match SLC38A1 ENST00000398637.9 8066 17 2912 2441 no_subtype FALSE canonical NA NA NA None 15 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1797.1 chr2 + 1544 9 novel_not_in_catalog CFLAR novel NA NA NA NA no_subtype FALSE canonical NA NA 1039 None 4 5 0 FALSE 0 0 NA A coding 299 897 247 1143 PB.10889.1 chrX - 2887 1 genic_intron novelGene_181 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 33 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8586.2 chr16 - 3315 3 intergenic novelGene_312 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1517 None 3 22 2 FALSE 0 0 NA B non_coding NA NA NA NA PB.8057.3 chr15 - 1658 6 genic_intron novelGene_440 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1124 None 4 22 4 FALSE 0 0 NA A non_coding NA NA NA NA PB.7918.1 chr14 - 1581 4 genic_intron novelGene_910 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 38 None 2 14 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.6879.1 chr12 + 2636 4 full-splice_match MED21 ENST00000282892.3 1753 4 26 -909 no_subtype FALSE canonical NA NA 262 None 33 26 0 FALSE 0 0 NA C coding 144 432 5 436 PB.11213.7 chrX + 2989 9 novel_in_catalog IKBKG novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2265 None 10 5 0 FALSE 0 0 NA C coding 269 807 160 966 PB.6879.3 chr12 + 3017 3 novel_in_catalog MED21 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1554 None 2 20 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6879.2 chr12 + 3338 5 novel_not_in_catalog MED21 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1874 None 6 25 2 TRUE 0 0 NA C non_coding NA NA NA NA PB.1399.5 chr2 + 1338 7 novel_not_in_catalog MXD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 942 None 2 3 0 FALSE 0 0 NA C coding 221 663 222 884 PB.1399.4 chr2 + 2037 2 full-splice_match MXD1 ENST00000410000.2 598 2 -60 -1379 no_subtype FALSE canonical NA NA 332 None 3 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3921.11 chr6 + 1721 1 incomplete-splice_match UBR2 ENST00000372899.5 7857 47 6135 2 no_subtype FALSE canonical NA NA NA None 22 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7913.1 chr14 - 2726 13 full-splice_match SETD3 ENST00000331768.9 2878 13 114 38 no_subtype FALSE canonical NA NA 38 None 33 6 0 FALSE 0 0 NA A coding 594 1782 47 1828 PB.5361.13 chr9 + 2648 14 full-splice_match SYK ENST00000375746.1 4990 14 -26 2368 no_subtype FALSE canonical NA NA 1994 None 41 1 0 FALSE 0 0 NA C coding 635 1905 160 2064 PB.6483.5 chr11 - 4190 24 novel_not_in_catalog PITPNM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 153 None 2 6 1 FALSE 0 0 NA B coding 651 1953 1978 3930 PB.4246.1 chr6 + 3214 1 genic_intron novelGene_1288 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6560.1 chr11 - 3329 1 incomplete-splice_match KCTD21 ENST00000340067.3 3585 2 255 2 no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A coding 260 780 26 805 PB.6143.4 chr11 - 3928 5 novel_not_in_catalog NAP1L4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1560 None 2 25 1 TRUE 0 0 NA C coding 106 318 2885 3202 PB.6143.3 chr11 - 2380 15 novel_in_catalog NAP1L4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 33 None 6 9 0 FALSE 0 0 NA C coding 375 1125 20 1144 PB.6143.1 chr11 - 2420 15 full-splice_match NAP1L4 ENST00000620138.4 2479 15 44 15 no_subtype FALSE canonical NA NA 80 None 4 10 0 FALSE 0 0 NA C coding 386 1158 98 1255 PB.4940.1 chr8 - 1625 11 novel_not_in_catalog NSMAF novel NA NA NA NA no_subtype FALSE non_canonical NA NA 60 None 2 5 0 FALSE 0 0 NA B coding 245 735 294 1028 PB.7507.1 chr13 - 3028 5 full-splice_match THSD1 ENST00000258613.4 2962 5 -59 -7 no_subtype FALSE canonical NA NA 157 None 7 4 0 FALSE 0 0 NA A coding 852 2556 239 2794 PB.4785.1 chr8 + 1572 1 full-splice_match CLDN23 ENST00000519106.1 2169 1 279 318 no_subtype FALSE canonical NA NA NA None 17 9 0 FALSE 0 0 NA A coding 292 876 183 1058 PB.6020.1 chr10 - 1692 1 antisense novelGene_MXI1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9864.1 chr19 + 1243 9 full-splice_match MVB12A ENST00000317040.11 2223 9 968 12 no_subtype FALSE canonical NA NA 846 None 5 6 0 FALSE 0 0 NA A coding 273 819 88 906 PB.7577.1 chr13 - 3867 22 full-splice_match TUBGCP3 ENST00000261965.7 3899 22 23 9 no_subtype FALSE canonical NA NA 240 None 21 2 0 FALSE 0 0 NA A coding 907 2721 165 2885 PB.1813.1 chr2 - 4113 3 genic_intron novelGene_1383 novel NA NA NA NA no_subtype TRUE canonical NA NA 2005 None 2 22 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6939.1 chr12 - 2678 9 full-splice_match CCNT1 ENST00000261900.7 6973 9 161 4134 no_subtype TRUE canonical NA NA 223 None 2 8 0 FALSE 0 0 NA C coding 726 2178 63 2240 PB.10234.2 chr20 + 1504 12 full-splice_match NOP56 ENST00000329276.9 2400 12 447 449 no_subtype FALSE canonical NA NA 1488 None 2 2 0 FALSE 0 0 NA C coding 478 1434 70 1503 PB.10234.3 chr20 + 1907 13 novel_not_in_catalog NOP56 novel NA NA NA NA no_subtype FALSE canonical NA NA 1448 None 47 0 0 TRUE 0 0 NA C coding 594 1782 30 1811 PB.5148.1 chr8 - 1915 14 full-splice_match TOP1MT ENST00000329245.8 1958 14 17 26 no_subtype TRUE canonical NA NA 140 None 2 9 0 FALSE 0 0 NA A coding 601 1803 19 1821 PB.10063.3 chr19 - 2774 16 novel_not_in_catalog DMPK novel NA NA NA NA no_subtype FALSE canonical NA NA 298 None 5 9 0 TRUE 0 0 NA B coding 625 1875 139 2013 PB.10234.4 chr20 + 1373 11 incomplete-splice_match NOP56 ENST00000329276.9 2400 12 487 540 3prime_fragment FALSE canonical NA NA 1310 None 3 0 0 FALSE 0 0 NA C coding 448 1344 30 1373 PB.4153.2 chr6 + 1375 2 novel_not_in_catalog TNFAIP3 novel NA NA NA NA no_subtype TRUE canonical NA NA 220 None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4153.3 chr6 + 4004 9 novel_not_in_catalog TNFAIP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2177 None 3 13 0 FALSE 0 0 NA C coding 790 2370 90 2459 PB.671.2 chr1 + 1416 3 novel_not_in_catalog MLLT11 novel NA NA NA NA no_subtype FALSE canonical NA NA 902 None 6 13 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.10397.1 chr20 + 1717 3 antisense novelGene_SERINC3_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 920 None 2 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3279.1 chr5 - 1981 3 full-splice_match SMIM15 ENST00000339020.7 2889 3 -1 909 no_subtype FALSE canonical NA NA 259 None 17 20 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.3279.2 chr5 - 1580 2 novel_in_catalog SMIM15 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 144 None 4 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5390.1 chr9 + 3630 18 novel_not_in_catalog TDRD7 novel NA NA NA NA no_subtype TRUE canonical NA NA 3180 None 27 0 0 TRUE 0 0 NA A coding 1098 3294 102 3395 PB.4153.1 chr6 + 4054 9 full-splice_match TNFAIP3 ENST00000237289.8 4432 9 -75 453 no_subtype FALSE canonical NA NA 2229 None 48 12 0 FALSE 0 0 NA C coding 790 2370 142 2511 PB.9934.1 chr19 + 2781 2 intergenic novelGene_345 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1732 None 2 17 0 FALSE 0 0 NA A coding 113 339 1963 2301 PB.6236.1 chr11 - 2918 12 full-splice_match UEVLD ENST00000396197.7 4156 12 -63 1301 no_subtype FALSE canonical NA NA 134 None 12 11 0 FALSE 0 0 NA A coding 471 1413 93 1505 PB.5832.23 chr10 - 1567 1 novel_in_catalog PSAP novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B coding 141 423 139 561 PB.3684.1 chr5 - 3401 12 novel_not_in_catalog CLK4 novel NA NA NA NA no_subtype FALSE canonical NA NA 96 None 4 10 1 TRUE 0 0 NA B coding 301 903 2153 3055 PB.10895.1 chrX + 941 7 full-splice_match PRDX4 ENST00000379341.8 1005 7 60 4 no_subtype FALSE canonical NA NA 830 None 4 4 1 FALSE 0 0 NA A coding 271 813 66 878 PB.9055.1 chr17 + 1558 2 novel_not_in_catalog ZNF830 novel NA NA NA NA no_subtype FALSE canonical NA NA 1412 None 2 6 1 TRUE 0 0 NA A coding 372 1116 28 1143 PB.4216.1 chr6 - 2577 2 antisense novelGene_ARID1B_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 238 None 4 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.6727.12 chr11 + 1513 1 genic_intron novelGene_1095 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA B coding 55 165 155 319 PB.6845.5 chr12 - 1771 11 novel_not_in_catalog PLBD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 158 None 2 15 1 TRUE 0 0 NA C coding 415 1245 426 1670 PB.6845.6 chr12 - 3358 2 novel_in_catalog PLBD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3077 None 2 24 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.123.1 chr1 + 1004 3 full-splice_match C1QA ENST00000374642.7 1143 3 135 4 no_subtype FALSE canonical NA NA 232 None 14 5 0 FALSE 0 0 NA A coding 245 735 70 804 PB.6845.1 chr12 - 1769 11 full-splice_match PLBD1 ENST00000240617.9 2426 11 628 29 no_subtype FALSE canonical NA NA 140 None 558 2 0 FALSE 0 0 NA C coding 553 1659 26 1684 PB.7581.1 chr13 + 1840 9 novel_not_in_catalog LAMP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1285 None 2 8 1 TRUE 0 0 NA B coding 302 906 97 1002 PB.6153.1 chr11 + 4049 12 full-splice_match STIM1 ENST00000300737.8 4038 12 -18 7 no_subtype TRUE canonical NA NA 2128 None 34 10 0 FALSE 0 0 NA A coding 685 2055 588 2642 PB.6727.10 chr11 - 6234 1 genic_intron novelGene_1094 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 43 0 FALSE 0 0 NA A coding 168 504 2165 2668 PB.6153.4 chr11 + 1676 1 genic_intron novelGene_32 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3144.3 chr4 - 1595 1 incomplete-splice_match CASP3 ENST00000523916.5 2540 7 939 7 no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2081.1 chr3 - 2857 10 novel_not_in_catalog DYNC1LI1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 168 None 2 22 5 TRUE 0 0 NA C coding 130 390 23 412 PB.2081.2 chr3 - 2975 4 full-splice_match CMTM6 ENST00000205636.3 3863 4 611 277 no_subtype FALSE canonical NA NA 190 None 184 16 0 FALSE 0 0 NA C coding 183 549 53 601 PB.2081.3 chr3 - 2623 1 incomplete-splice_match CMTM6 ENST00000205636.3 3863 4 1235 6 no_subtype FALSE canonical NA NA NA None 7 24 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10138.1 chr19 - 1749 8 novel_not_in_catalog SIGLEC12 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 361 None 2 6 0 TRUE 0 0 NA B coding 468 1404 62 1465 PB.550.1 chr1 + 3920 17 full-splice_match AHCYL1 ENST00000369799.9 4015 17 100 -5 no_subtype FALSE canonical NA NA 1853 None 2 8 0 FALSE 0 0 NA A coding 530 1590 268 1857 PB.2081.6 chr3 - 1681 14 novel_not_in_catalog DYNC1LI1 novel NA NA NA NA no_subtype TRUE canonical NA NA 217 None 7 0 0 TRUE 0 0 NA C coding 523 1569 72 1640 PB.2081.7 chr3 - 1658 13 full-splice_match DYNC1LI1 ENST00000273130.8 2504 13 42 804 no_subtype FALSE canonical NA NA 208 None 2 6 0 FALSE 0 0 NA C coding 523 1569 63 1631 PB.5353.9 chr9 - 5538 27 novel_not_in_catalog ZCCHC6 novel NA NA NA NA no_subtype FALSE canonical NA NA 80 None 8 7 0 FALSE 0 0 NA C coding 1495 4485 112 4596 PB.10609.5 chr21 - 4265 23 novel_not_in_catalog LSS novel NA NA NA NA no_subtype TRUE canonical NA NA 345 None 2 21 2 TRUE 0 0 NA B coding 652 1956 406 2361 PB.4799.2 chr8 + 1532 3 novel_in_catalog FDFT1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 266 None 2 8 0 FALSE 0 0 NA C coding 141 423 70 492 PB.9441.1 chr17 - 1821 13 full-splice_match PCYT2 ENST00000538936.6 5147 13 53 3273 no_subtype FALSE canonical NA NA 145 None 13 3 0 FALSE 0 0 NA A coding 389 1167 57 1223 PB.4799.1 chr8 + 1994 8 full-splice_match FDFT1 ENST00000220584.8 2176 8 167 15 no_subtype FALSE canonical NA NA 1087 None 65 5 0 FALSE 0 0 NA C coding 417 1251 56 1306 PB.294.6 chr1 + 2363 4 novel_in_catalog SMAP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1023 None 3 12 0 FALSE 0 0 NA C coding 198 594 553 1146 PB.5353.1 chr9 - 5633 3 genic_intron novelGene_782 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5459 None 2 41 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2302.3 chr3 - 6432 1 genic_intron novelGene_664 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 35 0 FALSE 0 0 NA A coding 107 321 2264 2584 PB.5353.7 chr9 - 5662 27 full-splice_match ZCCHC6 ENST00000375963.7 5379 27 -67 -216 no_subtype FALSE canonical NA NA 209 None 55 3 0 FALSE 0 0 NA C coding 1495 4485 241 4725 PB.294.2 chr1 + 2628 9 novel_in_catalog SMAP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2491 None 3 5 0 FALSE 0 0 NA C coding 306 918 1697 2614 PB.294.1 chr1 + 2553 10 full-splice_match SMAP2 ENST00000372718.7 2939 10 384 2 no_subtype FALSE canonical NA NA 1204 None 149 9 0 FALSE 0 0 NA C coding 429 1287 41 1327 PB.2302.7 chr3 - 3115 1 genic_intron novelGene_669 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8309.1 chr15 + 1191 1 full-splice_match HMGN1P38 ENST00000431116.2 303 1 -98 -790 no_subtype FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA A coding 100 300 99 398 PB.8932.1 chr17 - 2274 8 novel_not_in_catalog ZNF18 novel NA NA NA NA no_subtype FALSE canonical NA NA 32 None 3 4 0 TRUE 0 0 NA A coding 549 1647 115 1761 PB.6859.1 chr12 - 4400 26 novel_not_in_catalog C2CD5 novel NA NA NA NA no_subtype FALSE canonical NA NA 204 None 8 2 0 TRUE 0 0 NA A coding 1000 3000 234 3233 PB.8653.10 chr16 - 7632 49 full-splice_match CNOT1 ENST00000569240.5 7660 49 9 19 no_subtype TRUE canonical NA NA 98 None 13 2 0 FALSE 0 0 NA C coding 2371 7113 273 7385 PB.4260.1 chr7 - 1579 9 novel_in_catalog PRKAR1B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 115 None 2 5 0 FALSE 0 0 NA A coding 335 1005 138 1142 PB.7597.2 chr14 + 3422 1 genic_intron novelGene_200 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11141.1 chrX - 3835 31 incomplete-splice_match THOC2 ENST00000355725.8 4930 39 13 1082 internal_fragment FALSE canonical NA NA 92 None 12 0 0 FALSE 0 0 NA B coding 1271 3813 22 3834 PB.9884.1 chr19 - 3780 12 full-splice_match ELL ENST00000262809.8 4027 12 8 239 no_subtype FALSE canonical NA NA 199 None 35 15 0 FALSE 0 0 NA C coding 621 1863 65 1927 PB.10003.2 chr19 + 1428 7 novel_in_catalog RAB4B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1062 None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10003.1 chr19 + 1111 8 full-splice_match RAB4B ENST00000357052.7 1133 8 27 -5 no_subtype FALSE canonical NA NA 740 None 4 5 0 FALSE 0 0 NA C coding 213 639 84 722 PB.3482.1 chr5 - 1844 7 full-splice_match PPP2CA ENST00000481195.5 4649 7 32 2773 no_subtype FALSE canonical NA NA 351 None 94 2 0 FALSE 0 0 NA C coding 309 927 250 1176 PB.5803.7 chr10 - 6269 15 incomplete-splice_match JMJD1C ENST00000542921.5 8149 25 -149 2029 internal_fragment FALSE canonical NA NA 553 None 4 3 0 FALSE 0 0 NA B coding 1797 5391 878 6268 PB.5831.14 chr10 - 4206 2 genic C10orf54 novel NA NA NA NA no_subtype FALSE canonical NA NA 425 None 37 21 1 TRUE 0 0 NA C coding 152 456 1449 1904 PB.7714.1 chr14 - 1473 7 full-splice_match GMFB ENST00000358056.7 4301 7 175 2653 no_subtype FALSE canonical NA NA 97 None 28 4 0 FALSE 0 0 NA A coding 142 426 95 520 PB.8254.6 chr15 + 2759 7 novel_not_in_catalog IL16 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1795 None 2 7 0 FALSE 0 0 NA B coding 579 1737 94 1830 PB.1826.2 chr2 - 1649 4 full-splice_match METTL21A ENST00000411432.5 4805 4 -9 3165 no_subtype FALSE canonical NA NA 197 None 6 9 0 FALSE 0 0 NA C coding 218 654 227 880 PB.5803.5 chr10 - 5789 16 novel_not_in_catalog JMJD1C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 107 None 2 7 3 TRUE 0 0 NA B coding 1802 5406 383 5788 PB.3364.1 chr5 - 2709 1 genic_intron novelGene_787 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9161.1 chr17 + 1412 6 full-splice_match G6PC3 ENST00000269097.8 1533 6 158 -37 no_subtype FALSE canonical NA NA 750 None 2 2 0 FALSE 0 0 NA A coding 346 1038 74 1111 PB.1737.1 chr2 + 3892 8 full-splice_match FAM171B ENST00000304698.9 5826 8 52 1882 no_subtype FALSE canonical NA NA 1287 None 2 13 0 FALSE 0 0 NA A coding 826 2478 152 2629 PB.2115.1 chr3 - 2798 1 genic_intron novelGene_417 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5803.4 chr10 - 6157 18 novel_not_in_catalog JMJD1C novel NA NA NA NA no_subtype FALSE non_canonical NA NA 129 None 2 5 1 TRUE 0 0 NA B coding 1812 5436 722 6157 PB.2382.5 chr3 - 2850 6 novel_not_in_catalog NAA50 novel NA NA NA NA no_subtype FALSE canonical NA NA 300 None 9 9 0 FALSE 0 0 NA C coding 169 507 293 799 PB.10378.6 chr20 + 2694 2 genic_intron novelGene_384 novel NA NA NA NA no_subtype FALSE canonical NA NA 1063 None 3 17 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4404.3 chr7 - 3788 6 novel_not_in_catalog NUDCD3 novel NA NA NA NA no_subtype TRUE canonical NA NA 487 None 27 11 1 FALSE 0 0 NA B coding 329 987 296 1282 PB.4268.1 chr7 - 1452 11 full-splice_match SNX8 ENST00000222990.7 4727 11 43 3232 no_subtype FALSE canonical NA NA 94 None 11 0 0 FALSE 0 0 NA A coding 465 1395 1 1395 PB.1059.1 chr1 - 5411 39 novel_not_in_catalog RAB3GAP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 218 None 2 11 0 TRUE 0 0 NA A coding 1393 4179 104 4282 PB.5630.3 chr9 - 3222 20 incomplete-splice_match ABCA2 ENST00000341511.10 8063 49 4824 17 5prime_fragment FALSE canonical NA NA 93 None 4 1 0 FALSE 0 0 NA B coding 813 2439 96 2534 PB.8604.2 chr16 + 3471 18 full-splice_match CYLD ENST00000398568.6 3536 18 60 5 no_subtype FALSE canonical NA NA 2917 None 17 2 1 FALSE 0 0 NA C coding 953 2859 241 3099 PB.5803.1 chr10 - 4316 17 incomplete-splice_match JMJD1C ENST00000399262.6 8666 26 4347 3 5prime_fragment FALSE canonical NA NA 946 None 2 3 0 FALSE 0 0 NA B coding 1156 3468 25 3492 PB.3179.1 chr5 - 1513 6 full-splice_match CMBL ENST00000296658.3 2335 6 137 685 no_subtype FALSE canonical NA NA 265 None 5 10 0 FALSE 0 0 NA A coding 245 735 285 1019 PB.5630.4 chr9 - 5656 33 incomplete-splice_match ABCA2 ENST00000341511.10 8063 49 2396 11 5prime_fragment TRUE canonical NA NA 56 None 2 1 0 FALSE 0 0 NA B coding 1638 4914 49 4962 PB.2678.2 chr3 - 3264 24 novel_not_in_catalog ACAP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 296 None 17 9 0 TRUE 0 0 NA B coding 778 2334 244 2577 PB.10807.1 chr22 - 997 1 full-splice_match RPL5P34 ENST00000426545.1 891 1 -55 -51 no_subtype FALSE canonical NA NA NA None 8 0 0 FALSE 0 0 NA A coding 178 534 56 589 PB.8254.8 chr15 + 2228 6 novel_not_in_catalog IL16 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1663 None 2 6 0 TRUE 0 0 NA B coding 606 1818 88 1905 PB.1898.1 chr2 + 2707 7 novel_not_in_catalog RHBDD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2312 None 6 16 0 TRUE 0 0 NA B coding 315 945 91 1035 PB.5587.2 chr9 - 5907 25 novel_not_in_catalog RAPGEF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 99 None 5 26 2 TRUE 0 0 NA B coding 1060 3180 1 3180 PB.8121.1 chr15 - 4499 29 novel_not_in_catalog MYO1E novel NA NA NA NA no_subtype TRUE canonical NA NA 373 None 9 10 2 TRUE 0 0 NA B coding 1108 3324 371 3694 PB.7959.88 chr14 - 1554 9 fusion IGHV3-62,IGHA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 125 None 2 13 4 TRUE 0 0 NA B coding 254 762 747 1508 PB.7959.89 chr14 - 1466 8 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 11 3 TRUE 0 0 NA B coding 251 753 669 1421 PB.5587.6 chr9 - 5911 25 novel_not_in_catalog RAPGEF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 83 None 2 18 0 TRUE 0 0 NA B coding 1056 3168 23 3190 PB.5587.7 chr9 - 2820 1 incomplete-splice_match RAPGEF1 ENST00000372190.7 6045 24 3221 5 no_subtype FALSE canonical NA NA NA None 8 15 0 FALSE 0 0 NA B coding 171 513 1043 1555 PB.1408.1 chr2 - 2633 2 antisense novelGene_NAGK_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 258 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.82 chr14 - 1496 9 fusion IGHA1,IGHV4-61 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 21 2 TRUE 0 0 NA B coding 261 783 668 1450 PB.7959.83 chr14 - 1515 6 fusion IGHA1,IGHV1-2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 107 None 2 13 2 TRUE 0 0 NA B coding 254 762 708 1469 PB.7959.80 chr14 - 1520 7 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 82 None 19 10 1 TRUE 0 0 NA B coding 254 762 713 1474 PB.10189.1 chr19 + 2782 4 novel_not_in_catalog ZNF17 novel NA NA NA NA no_subtype FALSE canonical NA NA 498 None 2 4 0 FALSE 0 0 NA C coding 664 1992 351 2342 PB.6794.11 chr12 + 5416 13 novel_not_in_catalog PTPN6 novel NA NA NA NA no_subtype FALSE canonical NA NA 5226 None 3 29 1 TRUE 0 0 NA C coding 258 774 4425 5198 PB.6794.10 chr12 + 3211 15 novel_in_catalog PTPN6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3022 None 3 8 0 FALSE 0 0 NA C coding 391 1173 125 1297 PB.9714.2 chr19 + 3414 13 novel_in_catalog TRIP10 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2973 None 2 11 0 FALSE 0 0 NA C coding 422 1266 28 1293 PB.6794.12 chr12 + 1826 14 incomplete-splice_match PTPN6 ENST00000399448.5 2159 16 330 3 internal_fragment FALSE canonical NA NA 1638 None 4 0 0 FALSE 0 0 NA C coding 481 1443 168 1610 PB.8121.2 chr15 - 1824 10 novel_in_catalog MYO1E novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 374 None 2 2 0 FALSE 0 0 NA B coding 374 1122 372 1493 PB.3915.1 chr6 + 1691 7 full-splice_match BYSL ENST00000230340.8 2029 7 334 4 no_subtype FALSE canonical NA NA 1009 None 4 3 0 FALSE 0 0 NA C coding 437 1311 42 1352 PB.3915.3 chr6 + 2986 9 novel_not_in_catalog BYSL novel NA NA NA NA no_subtype TRUE canonical NA NA 2306 None 4 13 1 TRUE 0 0 NA C coding 437 1311 42 1352 PB.3915.2 chr6 + 1690 8 novel_not_in_catalog BYSL novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1007 None 2 3 1 TRUE 0 0 NA C coding 437 1311 40 1350 PB.8376.3 chr16 + 2474 22 full-splice_match TBL3 ENST00000568546.5 6803 22 67 4262 no_subtype FALSE canonical NA NA 2354 None 17 0 0 FALSE 0 0 NA A coding 804 2412 62 2473 PB.10680.1 chr22 - 6302 1 genic_intron novelGene_271 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 36 0 FALSE 0 0 NA A coding 118 354 2080 2433 PB.6517.1 chr11 + 2510 11 full-splice_match RELT ENST00000064780.6 3535 11 196 829 no_subtype FALSE canonical NA NA 1310 None 13 9 0 FALSE 0 0 NA C coding 256 768 588 1355 PB.8121.4 chr15 - 1571 4 novel_in_catalog MYO1E novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 373 None 2 4 0 FALSE 0 0 NA B coding 123 369 371 739 PB.9398.14 chr17 + 1541 1 incomplete-splice_match SEPT9 ENST00000541152.6 3026 10 1481 5 no_subtype FALSE canonical NA NA NA None 4 13 0 FALSE 0 0 NA C coding 26 78 368 445 PB.4889.1 chr8 + 1455 13 novel_not_in_catalog IDO1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1424 None 153 3 3 TRUE 0 0 NA A coding 364 1092 95 1186 PB.10887.2 chrX + 2994 9 novel_not_in_catalog SCML1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1274 None 2 19 2 TRUE 0 0 NA B coding 283 849 307 1155 PB.9398.13 chr17 + 2880 5 novel_not_in_catalog SEPT9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 819 None 4 23 0 TRUE 0 0 NA C coding 143 429 1209 1637 PB.10555.1 chr21 + 7445 38 novel_not_in_catalog DOPEY2 novel NA NA NA NA no_subtype FALSE canonical NA NA 6788 None 8 4 1 TRUE 0 0 NA A coding 2298 6894 144 7037 PB.3053.1 chr4 - 3065 2 genic_intron novelGene_1185 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 2 28 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5831.13 chr10 - 6182 3 genic_intron novelGene_677 novel NA NA NA NA no_subtype TRUE canonical NA NA 231 None 6 34 2 FALSE 0 0 NA A coding 100 300 259 558 PB.3171.1 chr5 - 2717 2 genic_intron novelGene_45 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 162 None 11 11 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7464.1 chr13 + 1446 9 novel_not_in_catalog GTF2F2 novel NA NA NA NA no_subtype TRUE canonical NA NA 796 None 4 4 1 TRUE 0 0 NA A coding 125 375 539 913 PB.5543.2 chr9 + 3339 21 novel_in_catalog ODF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2470 None 7 4 0 FALSE 0 0 NA C coding 805 2415 242 2656 PB.4807.1 chr8 + 1456 6 incomplete-splice_match PDGFRL ENST00000251630.10 1901 7 416 29 internal_fragment FALSE canonical NA NA 964 None 4 5 0 FALSE 0 0 NA A coding 375 1125 26 1150 PB.11150.1 chrX + 2508 15 full-splice_match UTP14A ENST00000394422.7 2488 15 -23 3 no_subtype FALSE canonical NA NA 2094 None 5 2 0 FALSE 0 0 NA A coding 771 2313 52 2364 PB.6361.7 chr11 - 3292 21 novel_not_in_catalog DDB1 novel NA NA NA NA no_subtype TRUE canonical NA NA 169 None 4 4 1 TRUE 0 0 NA C coding 791 2373 243 2615 PB.6361.1 chr11 - 4239 27 full-splice_match DDB1 ENST00000301764.11 4506 27 261 6 no_subtype TRUE canonical NA NA 198 None 95 3 0 FALSE 0 0 NA C coding 1140 3420 138 3557 PB.1401.2 chr2 - 2936 11 novel_not_in_catalog C2orf42 novel NA NA NA NA no_subtype FALSE canonical NA NA 229 None 2 8 0 TRUE 0 0 NA B coding 574 1722 511 2232 PB.7496.2 chr13 + 2589 4 novel_not_in_catalog TRIM13 novel NA NA NA NA no_subtype FALSE canonical NA NA 2231 None 2 15 1 TRUE 0 0 NA C coding 407 1221 230 1450 PB.7496.1 chr13 + 2546 4 novel_not_in_catalog TRIM13 novel NA NA NA NA no_subtype FALSE canonical NA NA 2188 None 3 14 1 TRUE 0 0 NA C coding 407 1221 187 1407 PB.1732.3 chr2 + 3704 24 novel_not_in_catalog DNAJC10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2807 None 2 9 1 TRUE 0 0 NA B coding 793 2379 438 2816 PB.4301.1 chr7 - 3745 2 antisense novelGene_TMEM106B_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3510 None 2 32 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10140.2 chr19 - 1304 2 full-splice_match FPR1 ENST00000304748.4 1930 2 19 607 no_subtype FALSE canonical NA NA 77 None 17 3 0 FALSE 0 0 NA C coding 350 1050 89 1138 PB.2021.1 chr3 + 3354 11 full-splice_match CCDC174 ENST00000383794.6 2942 11 66 -478 no_subtype TRUE canonical NA NA 1112 None 7 6 0 FALSE 0 0 NA A coding 467 1401 8 1408 PB.6984.1 chr12 + 1389 7 full-splice_match KRT18 ENST00000388835.3 1562 7 170 3 no_subtype FALSE canonical NA NA 1212 None 43 1 0 FALSE 0 0 NA A coding 430 1290 41 1330 PB.7923.2 chr14 + 1915 7 full-splice_match WDR25 ENST00000554998.5 1952 7 52 -15 no_subtype FALSE canonical NA NA 1448 None 2 0 0 FALSE 0 0 NA C coding 536 1608 60 1667 PB.5337.2 chr9 - 2701 4 incomplete-splice_match GNAQ ENST00000286548.8 6539 7 786 3052 5prime_fragment FALSE canonical NA NA 42 None 2 10 0 FALSE 0 0 NA B coding 157 471 44 514 PB.5759.1 chr10 - 873 2 full-splice_match C10orf10 ENST00000298295.3 2120 2 6 1241 no_subtype FALSE canonical NA NA 187 None 4 0 0 FALSE 0 0 NA A coding 212 636 213 848 PB.389.2 chr1 - 2063 2 genic_intron novelGene_533 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1212 None 2 11 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.1732.5 chr2 + 3456 25 novel_not_in_catalog DNAJC10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2836 None 2 10 1 TRUE 0 0 NA B coding 793 2379 467 2845 PB.10224.1 chr20 - 1410 10 novel_not_in_catalog SDCBP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 55 None 65 4 0 TRUE 0 0 NA B coding 292 876 75 950 PB.1732.6 chr2 + 2858 24 novel_not_in_catalog DNAJC10 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2799 None 2 0 0 FALSE 0 0 NA B coding 774 2322 535 2856 PB.264.1 chr1 - 849 3 novel_not_in_catalog LSM10 novel NA NA NA NA no_subtype FALSE canonical NA NA 133 None 3 1 0 TRUE 0 0 NA A coding 123 369 161 529 PB.4881.2 chr8 - 3584 10 full-splice_match WHSC1L1 ENST00000316985.7 3995 10 24 387 no_subtype FALSE canonical NA NA 450 None 14 6 0 FALSE 0 0 NA C coding 634 1902 528 2429 PB.7304.2 chr12 - 7794 50 incomplete-splice_match GCN1 ENST00000300648.6 8675 58 806 75 5prime_fragment FALSE canonical NA NA 45 None 2 5 1 FALSE 0 0 NA A coding 2375 7125 96 7220 PB.2448.1 chr3 - 1671 11 full-splice_match TPRA1 ENST00000355552.7 1933 11 276 -14 no_subtype TRUE canonical NA NA 84 None 10 3 0 FALSE 0 0 NA C coding 373 1119 102 1220 PB.10224.3 chr20 - 1489 9 novel_not_in_catalog SDCBP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 55 None 2 7 2 TRUE 0 0 NA B coding 187 561 75 635 PB.4881.4 chr8 - 1080 2 incomplete-splice_match WHSC1L1 ENST00000316985.7 3995 10 9 2906 internal_fragment FALSE canonical NA NA 465 None 2 2 0 FALSE 0 0 NA C coding 179 537 543 1079 PB.7968.2 chr15 - 3447 16 novel_not_in_catalog HERC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 248 None 2 4 0 FALSE 0 0 NA B coding 646 1938 798 2735 PB.1284.1 chr2 - 2882 13 full-splice_match ATL2 ENST00000378954.8 2868 13 -25 11 no_subtype TRUE canonical NA NA 145 None 11 5 0 FALSE 0 0 NA A coding 583 1749 28 1776 PB.6489.13 chr11 + 3087 1 genic_intron novelGene_641 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7087.1 chr12 + 1838 1 genic_intron novelGene_612 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 14 0 FALSE 0 0 NA A coding 120 360 383 742 PB.6704.2 chr11 - 1816 1 genic_intron novelGene_1060 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6909.1 chr12 + 2535 2 novel_not_in_catalog PPHLN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2449 None 3 21 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.3349.2 chr5 + 6329 4 novel_in_catalog ZFYVE16 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5382 None 2 55 0 FALSE 0 0 NA C coding 106 318 631 948 PB.4290.1 chr7 + 1340 8 novel_in_catalog ZDHHC4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 984 None 2 1 0 FALSE 0 0 NA A coding 344 1032 244 1275 PB.375.1 chr1 + 2682 5 full-splice_match CPT2 ENST00000371486.3 3094 5 409 3 no_subtype FALSE canonical NA NA 1751 None 22 4 0 FALSE 0 0 NA A coding 658 1974 107 2080 PB.8321.1 chr15 + 3768 1 incomplete-splice_match SYNM ENST00000336292.10 7394 4 3626 1 no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA B coding 352 1056 179 1234 PB.6489.11 chr11 + 2556 17 novel_in_catalog TCIRG1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2403 None 2 11 1 FALSE 0 0 NA C coding 407 1221 778 1998 PB.4082.1 chr6 + 2733 15 full-splice_match CDC40 ENST00000307731.1 3848 15 6 1109 no_subtype FALSE canonical NA NA 1580 None 49 6 0 FALSE 0 0 NA C coding 579 1737 19 1755 PB.5274.2 chr9 - 3722 18 novel_not_in_catalog VCP novel NA NA NA NA no_subtype TRUE canonical NA NA 289 None 2 2 1 TRUE 0 0 NA C coding 677 2031 273 2303 PB.5274.1 chr9 - 2855 17 full-splice_match VCP ENST00000358901.10 4370 17 624 891 no_subtype FALSE canonical NA NA 289 None 809 1 0 FALSE 0 0 NA C coding 806 2418 273 2690 PB.4082.2 chr6 + 2832 3 novel_in_catalog CDC40 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1677 None 2 23 0 FALSE 0 0 NA C coding 139 417 1436 1852 PB.3538.2 chr5 + 2934 1 genic HARS2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C coding 100 300 1566 1865 PB.9222.1 chr17 - 1595 10 full-splice_match SPOP ENST00000504102.5 1865 10 242 28 no_subtype FALSE canonical NA NA 60 None 55 2 0 FALSE 0 0 NA C coding 374 1122 127 1248 PB.11192.1 chrX + 1450 8 full-splice_match NSDHL ENST00000370274.7 1929 8 48 431 no_subtype FALSE canonical NA NA 935 None 4 1 1 FALSE 0 0 NA C coding 373 1119 147 1265 PB.680.2 chr1 + 1624 1 incomplete-splice_match SNX27 ENST00000458013.6 6403 12 4777 3 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5571.1 chr9 + 2951 20 novel_not_in_catalog FUBP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1726 None 28 5 0 TRUE 0 0 NA B coding 572 1716 17 1732 PB.5192.9 chr9 + 3168 1 genic_intron novelGene_7 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 17 0 FALSE 0 0 NA A coding 108 324 2844 3167 PB.5571.2 chr9 + 3048 19 novel_not_in_catalog FUBP3 novel NA NA NA NA no_subtype TRUE canonical NA NA 1710 None 4 6 0 TRUE 0 0 NA B coding 548 1644 73 1716 PB.3708.1 chr6 + 3156 1 genic_intron novelGene_20 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1338.1 chr2 - 1691 7 full-splice_match RTN4 ENST00000394609.6 1898 7 199 8 no_subtype FALSE canonical NA NA 164 None 2 18 1 FALSE 0 0 NA A coding 199 597 131 727 PB.3869.4 chr6 + 3157 4 novel_not_in_catalog PPARD novel NA NA NA NA no_subtype FALSE canonical NA NA 813 None 4 14 0 TRUE 0 0 NA B coding 294 882 177 1058 PB.8317.2 chr15 - 3055 2 genic_intron novelGene_889 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2798 None 2 18 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.1793.1 chr2 - 2939 3 antisense novelGene_BZW1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 737 None 2 32 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.769.10 chr1 + 1361 6 incomplete-splice_match MNDA ENST00000368141.4 1752 7 384 7 internal_fragment FALSE canonical NA NA 1053 None 7 3 0 FALSE 0 0 NA C coding 356 1068 31 1098 PB.266.87 chr1 - 1447 4 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 2 10 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.266.86 chr1 - 5730 3 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4036 None 6 43 2 TRUE 0 0 NA C coding 118 354 3480 3833 PB.266.81 chr1 - 1886 6 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 50 None 2 16 2 TRUE 0 0 NA C coding 118 354 295 648 PB.266.80 chr1 - 1948 6 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 109 None 3 11 2 TRUE 0 0 NA C coding 118 354 560 913 PB.266.83 chr1 - 1783 5 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 78 None 2 17 3 TRUE 0 0 NA C coding 118 354 229 582 PB.266.82 chr1 - 2931 4 novel_not_in_catalog CSF3R novel NA NA NA NA no_subtype FALSE non_canonical NA NA 103 None 2 15 1 TRUE 0 0 NA C coding 118 354 2215 2568 PB.2496.4 chr3 - 1325 11 incomplete-splice_match COPB2 ENST00000333188.9 3360 22 111 1924 internal_fragment FALSE canonical NA NA 74 None 6 1 0 FALSE 0 0 NA C coding 418 1254 72 1325 PB.244.1 chr1 + 1843 2 full-splice_match GJB3 ENST00000373366.2 2217 2 371 3 no_subtype FALSE canonical NA NA 219 None 4 6 0 FALSE 0 0 NA A coding 270 810 245 1054 PB.7628.2 chr14 + 2602 10 full-splice_match PSME1 ENST00000382708.7 1136 10 -5 -1461 no_subtype FALSE canonical NA NA 650 None 2 10 0 FALSE 0 0 NA C coding 250 750 69 818 PB.266.88 chr1 - 1335 5 novel_in_catalog CSF3R novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 103 None 2 8 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.7628.1 chr14 + 928 11 full-splice_match PSME1 ENST00000206451.10 1006 11 72 6 no_subtype FALSE canonical NA NA 702 None 15 1 0 FALSE 0 0 NA C coding 249 747 34 780 PB.9115.3 chr17 - 2058 10 novel_in_catalog SMARCE1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 54 None 2 7 0 FALSE 0 0 NA C coding 275 825 100 924 PB.9908.1 chr19 + 2608 4 genic AC078899.1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2322 None 16 10 0 TRUE 0 0 NA B coding 394 1182 74 1255 PB.9115.1 chr17 - 2748 12 novel_not_in_catalog SMARCE1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 70 None 4 12 1 TRUE 0 0 NA C coding 411 1233 116 1348 PB.3065.1 chr4 - 1433 6 full-splice_match GYPA ENST00000504786.5 357 6 -45 -1031 no_subtype FALSE canonical NA NA 82 None 6 6 0 FALSE 0 0 NA A coding 118 354 46 399 PB.147.1 chr1 + 4301 6 full-splice_match CLIC4 ENST00000374379.8 4346 6 31 14 no_subtype FALSE canonical NA NA 763 None 57 19 0 FALSE 0 0 NA C coding 253 759 167 925 PB.147.2 chr1 + 1567 1 incomplete-splice_match CLIC4 ENST00000374379.8 4346 6 2721 59 no_subtype FALSE canonical NA NA NA None 9 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9908.3 chr19 + 3478 5 genic AC078899.1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2653 None 47 14 0 TRUE 0 0 NA B coding 394 1182 74 1255 PB.7532.1 chr13 - 1581 7 full-splice_match EDNRB ENST00000334286.7 4277 7 -19 2715 no_subtype FALSE canonical NA NA 739 None 10 1 0 FALSE 0 0 NA A coding 441 1323 257 1579 PB.1701.2 chr2 + 2989 1 genic_intron novelGene_1324 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1701.3 chr2 + 1691 1 incomplete-splice_match PDK1 ENST00000282077.7 14193 11 2620 9883 no_subtype FALSE canonical NA NA NA None 6 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1701.1 chr2 + 4229 11 full-splice_match PDK1 ENST00000282077.7 14193 11 114 9850 no_subtype FALSE canonical NA NA 1238 None 2 24 0 FALSE 0 0 NA C coding 436 1308 69 1376 PB.5223.1 chr9 + 1661 2 antisense novelGene_NFIB_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 33 None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7480.1 chr13 - 1587 2 genic MED4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 318 None 4 9 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.7563.2 chr13 + 2660 1 genic_intron novelGene_937 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10198.2 chr19 - 1847 3 full-splice_match ZSCAN18 ENST00000600845.1 761 3 -52 -1034 no_subtype FALSE canonical NA NA 141 None 3 10 0 FALSE 0 0 NA C coding 197 591 261 851 PB.10198.1 chr19 - 1771 3 novel_in_catalog ZSCAN18 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 65 None 7 8 0 FALSE 0 0 NA C coding 197 591 185 775 PB.8436.1 chr16 + 6751 24 novel_not_in_catalog CLEC16A novel NA NA NA NA no_subtype TRUE canonical NA NA 5509 None 2 30 1 TRUE 0 0 NA B coding 1051 3153 149 3301 PB.9979.1 chr19 + 2088 1 novel_in_catalog MRPS12 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A coding 109 327 1444 1770 PB.10957.1 chrX + 4067 29 full-splice_match HDAC6 ENST00000334136.9 4190 29 115 8 no_subtype TRUE canonical NA NA 3642 None 11 2 0 FALSE 0 0 NA C coding 1160 3480 229 3708 PB.10957.2 chrX + 4080 29 novel_not_in_catalog HDAC6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3655 None 3 0 0 FALSE 0 0 NA C coding 1160 3480 242 3721 PB.10957.3 chrX + 4055 29 novel_in_catalog HDAC6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3629 None 2 5 1 FALSE 0 0 NA C coding 1160 3480 216 3695 PB.10957.4 chrX + 3919 27 novel_in_catalog HDAC6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3487 None 2 2 0 FALSE 0 0 NA C coding 1160 3480 74 3553 PB.11175.1 chrX + 1786 5 full-splice_match CD40LG ENST00000370629.6 1817 5 27 4 no_subtype FALSE canonical NA NA 438 None 7 4 0 FALSE 0 0 NA A coding 261 783 30 812 PB.11092.1 chrX + 1241 3 novel_not_in_catalog BEX4 novel NA NA NA NA no_subtype FALSE canonical NA NA 199 None 5 8 0 FALSE 0 0 NA A coding 120 360 205 564 PB.2193.1 chr3 - 1442 5 full-splice_match RHOA ENST00000418115.5 2031 5 235 354 no_subtype FALSE canonical NA NA 148 None 3 1 0 FALSE 0 0 NA C coding 193 579 151 729 PB.7173.1 chr12 - 2618 21 novel_not_in_catalog HAL novel NA NA NA NA no_subtype FALSE canonical NA NA 60 None 16 4 0 FALSE 0 0 NA A coding 657 1971 142 2112 PB.9985.1 chr19 + 3452 5 novel_not_in_catalog MED29 novel NA NA NA NA no_subtype FALSE canonical NA NA 1164 None 22 23 0 TRUE 0 0 NA A coding 200 600 12 611 PB.6350.13 chr11 + 1205 1 incomplete-splice_match MS4A1 ENST00000345732.8 3331 7 1442 685 no_subtype FALSE canonical NA NA NA None 14 4 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.9633.3 chr19 - 1861 3 genic R3HDM4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 261 None 2 14 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.1619.1 chr2 - 5789 1 novel_in_catalog RP11-570L15.1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 6 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8164.1 chr15 + 5770 3 genic_intron novelGene_620 novel NA NA NA NA no_subtype FALSE canonical NA NA 4435 None 3 21 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.2891.1 chr4 - 3150 5 genic_intron novelGene_719 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2929 None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1095.1 chr1 - 3971 5 novel_not_in_catalog WNT9A novel NA NA NA NA no_subtype FALSE canonical NA NA 140 None 6 8 1 TRUE 0 0 NA A coding 365 1095 46 1140 PB.5842.2 chr10 - 2582 15 novel_not_in_catalog ECD novel NA NA NA NA no_subtype TRUE canonical NA NA 197 None 2 4 1 TRUE 0 0 NA C coding 644 1932 592 2523 PB.5842.1 chr10 - 3050 14 full-splice_match ECD ENST00000372979.8 3069 14 -3 22 no_subtype TRUE canonical NA NA 197 None 4 10 0 FALSE 0 0 NA C coding 644 1932 211 2142 PB.2134.3 chr3 - 1296 7 full-splice_match ZDHHC3 ENST00000424952.6 2687 7 22 1369 no_subtype FALSE canonical NA NA 223 None 52 2 0 FALSE 0 0 NA C coding 298 894 251 1144 PB.6538.1 chr11 + 1427 8 full-splice_match DGAT2 ENST00000228027.11 2453 8 123 903 no_subtype FALSE canonical NA NA 1149 None 56 8 0 FALSE 0 0 NA A coding 388 1164 138 1301 PB.5565.1 chr9 - 1756 3 novel_not_in_catalog PTGES novel NA NA NA NA no_subtype FALSE canonical NA NA 160 None 5 8 1 FALSE 0 0 NA A coding 95 285 35 319 PB.5044.2 chr8 - 2959 5 novel_in_catalog ANKRD46 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 363 None 2 12 0 FALSE 0 0 NA B coding 228 684 494 1177 PB.2339.4 chr3 + 2719 1 novel_in_catalog TFG novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9965.1 chr19 + 3086 5 full-splice_match ZNF540 ENST00000316433.8 3099 5 7 6 no_subtype FALSE canonical NA NA 507 None 2 5 0 FALSE 0 0 NA A coding 660 1980 276 2255 PB.5943.2 chr10 + 1786 2 genic_intron novelGene_883 novel NA NA NA NA no_subtype FALSE canonical NA NA 213 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5943.3 chr10 + 1444 1 genic_intron novelGene_885 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4996.1 chr8 - 3127 8 full-splice_match SNX16 ENST00000345957.8 1853 8 96 -1370 no_subtype FALSE canonical NA NA 87 None 4 18 1 FALSE 0 0 NA A coding 344 1032 184 1215 PB.5943.1 chr10 + 4774 8 full-splice_match LCOR ENST00000371103.8 10342 8 16 5552 no_subtype FALSE canonical NA NA 837 None 2 22 0 FALSE 0 0 NA A coding 433 1299 506 1804 PB.8021.1 chr15 - 4786 25 full-splice_match VPS39 ENST00000318006.9 4844 25 33 25 no_subtype FALSE canonical NA NA 203 None 6 18 0 FALSE 0 0 NA C coding 875 2625 131 2755 PB.8021.3 chr15 - 3314 10 novel_not_in_catalog VPS39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 223 None 2 23 4 TRUE 0 0 NA C coding 100 300 151 450 PB.9080.1 chr17 - 3007 15 full-splice_match DDX52 ENST00000617633.4 6362 15 17 3338 no_subtype FALSE canonical NA NA 114 None 3 9 1 FALSE 0 0 NA A coding 599 1797 28 1824 PB.337.1 chr1 + 1627 1 full-splice_match HPDL ENST00000334815.4 1629 1 -4 6 no_subtype FALSE canonical NA NA NA None 3 0 0 FALSE 0 0 NA A coding 371 1113 249 1361 PB.7959.231 chr14 - 1564 10 fusion IGHV4-4,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 18 5 TRUE 0 0 NA B coding 196 588 848 1435 PB.5778.1 chr10 - 2695 2 genic_intron novelGene_499 novel NA NA NA NA no_subtype FALSE canonical NA NA 1724 None 6 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.984.4 chr1 + 2784 3 antisense novelGene_SNORA77_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2679 None 2 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10434.6 chr20 - 3231 14 novel_not_in_catalog STAU1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 25 None 2 5 0 TRUE 0 0 NA C coding 496 1488 211 1698 PB.10434.7 chr20 - 3119 12 full-splice_match STAU1 ENST00000347458.9 3136 12 13 4 no_subtype FALSE canonical NA NA 239 None 2 11 1 FALSE 0 0 NA C coding 496 1488 278 1765 PB.10434.8 chr20 - 3035 14 novel_not_in_catalog STAU1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 25 None 5 3 0 TRUE 0 0 NA C coding 496 1488 211 1698 PB.10569.1 chr21 + 1686 2 novel_not_in_catalog B3GALT5 novel NA NA NA NA no_subtype FALSE canonical NA NA 80 None 3 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5878.1 chr10 + 1564 6 novel_not_in_catalog FAM213A novel NA NA NA NA no_subtype FALSE canonical NA NA 563 None 2 1 0 TRUE 0 0 NA A coding 218 654 21 674 PB.9101.1 chr17 - 2097 4 full-splice_match ORMDL3 ENST00000304046.6 2111 4 11 3 no_subtype FALSE canonical NA NA 107 None 3 6 0 FALSE 0 0 NA A coding 153 459 130 588 PB.8406.1 chr16 - 5853 3 novel_not_in_catalog CREBBP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2173 None 2 35 1 TRUE 0 0 NA B coding 99 297 1781 2077 PB.7959.217 chr14 - 1520 8 fusion IGHV5-51,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 101 None 2 10 3 TRUE 0 0 NA B coding 444 1332 56 1387 PB.7959.214 chr14 - 1508 10 fusion IGHV4-34,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 82 None 2 15 4 TRUE 0 0 NA B coding 196 588 788 1375 PB.8406.2 chr16 - 6454 4 novel_not_in_catalog CREBBP novel NA NA NA NA no_subtype TRUE non_canonical NA NA 471 None 2 36 2 TRUE 0 0 NA B coding 99 297 2383 2679 PB.7959.212 chr14 - 1599 10 fusion CH17-212P11.5,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 105 None 2 12 4 TRUE 0 0 NA B coding 196 588 879 1466 PB.4329.2 chr7 + 3300 1 antisense novelGene_TRA2A_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.210 chr14 - 1496 9 fusion IGHV4-34,IGHG1,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 77 None 2 7 3 TRUE 0 0 NA B coding 196 588 775 1362 PB.7959.211 chr14 - 1534 9 fusion IGHV4-39,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 2 11 4 TRUE 0 0 NA B coding 196 588 813 1400 PB.6694.4 chr11 + 7263 4 antisense novelGene_NECTIN1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 7208 None 2 57 2 FALSE 0 0 NA A coding 121 363 2790 3152 PB.488.1 chr1 + 3189 2 antisense novelGene_FAM69A_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3122 None 4 23 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.1158.4 chr1 - 2696 14 full-splice_match HNRNPU ENST00000283179.13 3704 14 -20 1028 no_subtype FALSE canonical NA NA 875 None 11 0 0 FALSE 0 0 NA C coding 825 2475 185 2659 PB.3775.2 chr6 + 5688 1 genic_intron novelGene_197 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 30 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7959.218 chr14 - 1494 11 fusion IGHV2-26,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 60 None 2 14 6 TRUE 0 0 NA B coding 196 588 774 1361 PB.7959.219 chr14 - 1541 10 fusion CH17-212P11.5,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 105 None 3 8 4 TRUE 0 0 NA B coding 196 588 821 1408 PB.6693.2 chr11 - 1803 4 full-splice_match THY1 ENST00000284240.9 3556 4 945 808 no_subtype FALSE canonical NA NA 71 None 35 4 0 FALSE 0 0 NA A coding 161 483 96 578 PB.8337.1 chr16 - 2971 18 full-splice_match RHBDF1 ENST00000262316.10 2992 18 18 3 no_subtype FALSE canonical NA NA 101 None 14 7 0 FALSE 0 0 NA A coding 855 2565 126 2690 PB.656.1 chr1 + 4272 19 novel_not_in_catalog ADAMTSL4 novel NA NA NA NA no_subtype FALSE canonical NA NA 3406 None 6 20 0 FALSE 0 0 NA A coding 1074 3222 319 3540 PB.9922.1 chr19 - 1727 17 novel_not_in_catalog PEPD novel NA NA NA NA no_subtype TRUE canonical NA NA 30 None 57 2 0 TRUE 0 0 NA A coding 493 1479 14 1492 PB.10947.2 chrX - 1844 16 full-splice_match SLC38A5 ENST00000595796.5 2659 16 804 11 no_subtype FALSE canonical NA NA 39 None 10 4 0 FALSE 0 0 NA A coding 472 1416 41 1456 PB.4387.2 chr7 + 2794 13 incomplete-splice_match CDK13 ENST00000340829.9 5066 14 1843 429 internal_fragment FALSE canonical NA NA 1797 None 5 1 0 FALSE 0 0 NA A coding 838 2514 132 2645 PB.4387.1 chr7 + 1681 2 genic_intron novelGene_397 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 233 None 2 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7245.1 chr12 + 3218 2 novel_not_in_catalog ATP2A2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 855 None 2 27 1 TRUE 0 0 NA B coding 112 336 1454 1789 PB.7535.3 chr13 - 1763 1 genic_intron novelGene_738 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8294.1 chr15 + 2047 1 novel_in_catalog IQGAP1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA C coding 100 300 534 833 PB.6961.2 chr12 - 3041 17 novel_in_catalog RACGAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 42 None 8 10 0 FALSE 0 0 NA B coding 632 1896 47 1942 PB.6377.1 chr11 - 2685 11 novel_not_in_catalog TUT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 114 None 15 3 1 TRUE 0 0 NA A coding 871 2613 33 2645 PB.10963.5 chrX - 3701 26 novel_not_in_catalog GRIPAP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 75 None 2 29 1 FALSE 0 0 NA B coding 796 2388 34 2421 PB.10963.7 chrX - 2909 25 novel_in_catalog GRIPAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 36 None 2 5 0 FALSE 0 0 NA B coding 803 2409 31 2439 PB.10963.6 chrX - 3092 27 novel_not_in_catalog GRIPAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 46 None 5 3 1 FALSE 0 0 NA B coding 873 2619 5 2623 PB.62.1 chr1 + 1514 10 novel_not_in_catalog MIIP novel NA NA NA NA no_subtype FALSE canonical NA NA 1215 None 2 6 1 FALSE 0 0 NA A coding 383 1149 136 1284 PB.1417.2 chr2 + 2968 11 novel_not_in_catalog CCT7 novel NA NA NA NA no_subtype FALSE canonical NA NA 2603 None 3 10 1 TRUE 0 0 NA B coding 357 1071 57 1127 PB.10963.2 chrX - 3739 25 novel_in_catalog GRIPAP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 76 None 3 8 0 FALSE 0 0 NA B coding 796 2388 35 2422 PB.714.2 chr1 + 1828 7 novel_in_catalog FLAD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1621 None 4 2 0 FALSE 0 0 NA C coding 359 1077 204 1280 PB.7959.124 chr14 - 1492 8 fusion IGHV5-51,IGHA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 104 None 6 8 3 TRUE 0 0 NA B coding 254 762 687 1448 PB.8049.1 chr15 + 3941 13 full-splice_match WDR76 ENST00000263795.10 3978 13 25 12 no_subtype FALSE canonical NA NA 1661 None 2 25 1 FALSE 0 0 NA A coding 626 1878 46 1923 PB.1019.7 chr1 + 3215 14 novel_not_in_catalog CD46 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1240 None 3 21 1 TRUE 0 0 NA B coding 339 1017 180 1196 PB.6955.4 chr12 - 1812 14 novel_in_catalog MCRS1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 108 None 9 1 0 FALSE 0 0 NA C coding 449 1347 138 1484 PB.5685.1 chr10 - 2977 9 full-splice_match SEPHS1 ENST00000327347.9 3273 9 271 25 no_subtype FALSE canonical NA NA 27 None 4 9 0 FALSE 0 0 NA A coding 392 1176 106 1281 PB.5145.3 chr8 + 1826 7 novel_not_in_catalog PTP4A3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1409 None 4 13 0 TRUE 0 0 NA B coding 173 519 863 1381 PB.3961.1 chr6 - 1366 10 novel_not_in_catalog RHAG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 219 None 2 1 1 TRUE 0 0 NA A coding 410 1230 63 1292 PB.7650.1 chr14 - 2665 3 full-splice_match DTD2 ENST00000310850.8 2717 3 46 6 no_subtype FALSE canonical NA NA 182 None 20 15 0 FALSE 0 0 NA A coding 168 504 72 575 PB.10769.1 chr22 + 1693 9 novel_not_in_catalog APOBEC3G novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1361 None 48 8 1 TRUE 0 0 NA A coding 317 951 423 1373 PB.2878.1 chr4 - 4159 9 full-splice_match RCHY1 ENST00000324439.9 4686 9 383 144 no_subtype FALSE canonical NA NA 106 None 8 24 0 FALSE 0 0 NA A coding 261 783 17 799 PB.1424.1 chr2 + 1485 1 antisense novelGene_MOB1A_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3732.2 chr6 - 1911 11 novel_not_in_catalog SLC35B3 novel NA NA NA NA no_subtype TRUE canonical NA NA 184 None 3 12 1 FALSE 0 0 NA B coding 401 1203 228 1430 PB.610.2 chr1 + 3607 27 novel_in_catalog WDR3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2848 None 4 2 0 FALSE 0 0 NA C coding 943 2829 173 3001 PB.7755.1 chr14 + 2537 2 full-splice_match AKAP5 ENST00000394718.4 6487 2 31 3919 no_subtype FALSE canonical NA NA 84 None 5 10 0 FALSE 0 0 NA A coding 427 1281 348 1628 PB.3732.1 chr6 - 1836 11 novel_not_in_catalog SLC35B3 novel NA NA NA NA no_subtype FALSE canonical NA NA 109 None 7 3 0 FALSE 0 0 NA B coding 401 1203 153 1355 PB.8785.1 chr16 - 3089 3 novel_not_in_catalog ZDHHC7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 578 None 2 19 1 TRUE 0 0 NA B coding 111 333 2688 3020 PB.670.8 chr1 - 2587 2 novel_in_catalog CDC42SE1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 100 None 4 21 0 FALSE 0 0 NA C coding 109 327 548 874 PB.8785.2 chr16 - 2573 6 incomplete-splice_match ZDHHC7 ENST00000313732.8 3442 8 583 286 5prime_fragment FALSE canonical NA NA 85 None 2 16 0 FALSE 0 0 NA B coding 208 624 71 694 PB.2698.1 chr3 + 467 5 full-splice_match RPL35A ENST00000464167.5 1437 5 206 764 no_subtype FALSE canonical NA NA 370 None 4 1 0 FALSE 0 0 NA A coding 110 330 62 391 PB.10061.1 chr19 - 2257 20 novel_not_in_catalog EML2 novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 2 1 0 TRUE 0 0 NA A coding 649 1947 52 1998 PB.8474.2 chr16 - 1636 1 novel_in_catalog RPS15A novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8474.3 chr16 - 2261 6 full-splice_match ARL6IP1 ENST00000304414.11 2409 6 143 5 no_subtype FALSE canonical NA NA 105 None 41 11 0 FALSE 0 0 NA C coding 203 609 70 678 PB.670.3 chr1 - 1817 1 incomplete-splice_match CDC42SE1 ENST00000357235.5 3045 5 1207 22 no_subtype FALSE canonical NA NA NA None 4 14 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8474.1 chr16 - 2612 2 genic SMG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2336 None 2 17 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.8474.6 chr16 - 5930 8 incomplete-splice_match SMG1 ENST00000446231.6 16115 63 10168 17 5prime_fragment FALSE canonical NA NA 139 None 2 26 0 FALSE 0 0 NA B coding 326 978 251 1228 PB.5460.23 chr9 - 5494 23 fusion RP11-9M16.2,AKNA novel NA NA NA NA no_subtype FALSE canonical NA NA 23 None 2 42 1 TRUE 0 0 NA B coding 1414 4242 363 4604 PB.8474.4 chr16 - 1445 1 incomplete-splice_match ARL6IP1 ENST00000304414.11 2409 6 952 13 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8474.5 chr16 - 2867 1 incomplete-splice_match SMG1 ENST00000446231.6 16115 63 13234 15 no_subtype FALSE canonical NA NA NA None 7 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8697.1 chr16 - 2027 1 incomplete-splice_match SMPD3 ENST00000219334.9 5453 9 3420 7 no_subtype FALSE canonical NA NA NA None 4 23 0 FALSE 0 0 NA B coding 146 438 1077 1514 PB.1158.3 chr1 - 2868 14 novel_not_in_catalog HNRNPU novel NA NA NA NA no_subtype FALSE non_canonical NA NA 21 None 2 3 0 FALSE 0 0 NA C coding 488 1464 342 1805 PB.8432.1 chr16 - 3117 6 incomplete-splice_match TVP23A ENST00000573360.5 3677 8 557 3 5prime_fragment FALSE canonical NA NA 286 None 2 11 0 FALSE 0 0 NA A coding 149 447 245 691 PB.4744.6 chr7 - 3049 5 novel_not_in_catalog GIMAP6 novel NA NA NA NA no_subtype FALSE canonical NA NA 182 None 9 11 1 TRUE 0 0 NA B coding 292 876 311 1186 PB.11171.1 chrX + 2363 7 full-splice_match FHL1 ENST00000370690.7 2441 7 68 10 no_subtype FALSE canonical NA NA 884 None 4 2 0 FALSE 0 0 NA C coding 280 840 197 1036 PB.4744.2 chr7 - 2739 4 novel_not_in_catalog GIMAP6 novel NA NA NA NA no_subtype TRUE canonical NA NA 217 None 11 9 1 TRUE 0 0 NA B coding 212 636 234 869 PB.1432.13 chr2 + 3196 12 novel_not_in_catalog TTC31 novel NA NA NA NA no_subtype FALSE canonical NA NA 1885 None 2 23 0 TRUE 0 0 NA B coding 360 1080 8 1087 PB.1432.12 chr2 + 3663 9 novel_not_in_catalog TTC31 novel NA NA NA NA no_subtype FALSE canonical NA NA 2352 None 2 9 1 TRUE 0 0 NA B coding 114 342 489 830 PB.1432.11 chr2 + 2806 13 novel_not_in_catalog TTC31 novel NA NA NA NA no_subtype FALSE canonical NA NA 1495 None 4 5 0 TRUE 0 0 NA B coding 491 1473 10 1482 PB.1432.10 chr2 + 2942 12 novel_not_in_catalog TTC31 novel NA NA NA NA no_subtype FALSE canonical NA NA 1632 None 2 18 2 TRUE 0 0 NA B coding 332 996 13 1008 PB.2359.1 chr3 - 2838 2 genic_intron novelGene_969 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 127 None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1432.16 chr2 + 3412 11 novel_not_in_catalog TTC31 novel NA NA NA NA no_subtype FALSE canonical NA NA 2102 None 2 9 0 TRUE 0 0 NA B coding 248 744 1346 2089 PB.1432.15 chr2 + 2820 12 novel_not_in_catalog TTC31 novel NA NA NA NA no_subtype FALSE canonical NA NA 1509 None 2 21 3 TRUE 0 0 NA B coding 367 1101 396 1496 PB.9958.1 chr19 - 3018 5 full-splice_match ZNF790 ENST00000356725.8 3037 5 7 12 no_subtype FALSE canonical NA NA 41 None 3 12 1 FALSE 0 0 NA A coding 636 1908 115 2022 PB.7416.3 chr13 - 2193 4 novel_in_catalog HMGB1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 141 None 3 9 0 FALSE 0 0 NA C coding 174 522 156 677 PB.7416.2 chr13 - 1754 1 novel_in_catalog HMGB1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7416.1 chr13 - 1166 5 full-splice_match HMGB1 ENST00000341423.9 5485 5 52 4267 no_subtype FALSE canonical NA NA 118 None 38 0 0 FALSE 0 0 NA C coding 215 645 133 777 PB.8131.1 chr15 + 2492 8 full-splice_match RAB8B ENST00000321437.8 4943 8 165 2286 no_subtype FALSE canonical NA NA 522 None 19 18 1 FALSE 0 0 NA C coding 126 378 235 612 PB.3291.2 chr5 + 2877 2 novel_not_in_catalog CWC27 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 899 None 2 21 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.4397.1 chr7 - 3544 5 full-splice_match URGCP ENST00000402306.7 3563 5 12 7 no_subtype FALSE canonical NA NA 42 None 9 4 0 FALSE 0 0 NA C coding 922 2766 29 2794 PB.4397.2 chr7 - 3579 6 full-splice_match URGCP ENST00000453200.5 4042 6 453 10 no_subtype FALSE canonical NA NA 55 None 16 4 0 FALSE 0 0 NA C coding 931 2793 42 2834 PB.4397.3 chr7 - 3904 7 novel_in_catalog URGCP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 253 None 2 8 0 FALSE 0 0 NA C coding 888 2664 491 3154 PB.5109.1 chr8 + 1739 4 genic_intron novelGene_1081 novel NA NA NA NA no_subtype TRUE canonical NA NA 321 None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8100.4 chr15 - 3323 10 novel_not_in_catalog CCPG1 novel NA NA NA NA no_subtype FALSE canonical NA NA 484 None 2 6 1 FALSE 0 0 NA C coding 782 2346 494 2839 PB.8100.5 chr15 - 3077 9 full-splice_match CCPG1 ENST00000442196.7 3453 9 -35 411 no_subtype FALSE canonical NA NA 74 None 2 3 0 FALSE 0 0 NA C coding 807 2421 84 2504 PB.2690.8 chr3 + 3595 17 novel_not_in_catalog PAK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3109 None 4 21 2 TRUE 0 0 NA B coding 524 1572 230 1801 PB.8100.3 chr15 - 3887 9 novel_in_catalog CCPG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 497 None 2 8 0 FALSE 0 0 NA C coding 807 2421 507 2927 PB.4456.1 chr7 + 3190 35 novel_not_in_catalog ELN novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2170 None 2 18 6 TRUE 0 0 NA B coding 101 303 736 1038 PB.2690.4 chr3 + 3676 16 novel_not_in_catalog PAK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3070 None 2 21 1 TRUE 0 0 NA B coding 524 1572 289 1860 PB.2690.5 chr3 + 4194 16 novel_not_in_catalog PAK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3017 None 5 26 1 TRUE 0 0 NA B coding 524 1572 207 1778 PB.11218.1 chrX - 3737 13 novel_not_in_catalog GAB3 novel NA NA NA NA no_subtype TRUE canonical NA NA 95 None 2 27 3 TRUE 0 0 NA A coding 586 1758 24 1781 PB.2690.1 chr3 + 2717 15 novel_not_in_catalog PAK2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1692 None 53 7 0 TRUE 0 0 NA B coding 524 1572 205 1776 PB.8100.8 chr15 - 1458 8 full-splice_match CCPG1 ENST00000310958.10 6822 8 216 5148 no_subtype FALSE canonical NA NA 74 None 44 0 0 FALSE 0 0 NA C coding 458 1374 84 1457 PB.8100.9 chr15 - 3425 8 full-splice_match CCPG1 ENST00000569205.5 2970 8 -295 -160 no_subtype FALSE canonical NA NA 501 None 19 8 0 FALSE 0 0 NA C coding 757 2271 511 2781 PB.6352.3 chr11 + 2788 3 novel_not_in_catalog MS4A12 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2721 None 7 11 1 TRUE 0 0 NA C coding 119 357 58 414 PB.7626.1 chr14 + 2588 10 full-splice_match PCK2 ENST00000545054.6 2505 10 10 -93 no_subtype FALSE canonical NA NA 1974 None 2 3 0 FALSE 0 0 NA A coding 506 1518 909 2426 PB.1180.3 chr2 - 5779 29 full-splice_match KIDINS220 ENST00000473731.5 7248 29 5 1464 no_subtype FALSE canonical NA NA 157 None 4 2 0 FALSE 0 0 NA A coding 1752 5256 194 5449 PB.325.2 chr1 + 1004 8 full-splice_match ATP6V0B ENST00000472174.6 1298 8 291 3 no_subtype FALSE canonical NA NA 693 None 7 4 0 FALSE 0 0 NA C coding 205 615 103 717 PB.325.3 chr1 + 1649 7 full-splice_match ATP6V0B ENST00000473485.5 1664 7 16 -1 no_subtype FALSE canonical NA NA 1336 None 4 7 0 FALSE 0 0 NA C coding 158 474 887 1360 PB.325.1 chr1 + 1459 8 novel_not_in_catalog ATP6V0B novel NA NA NA NA no_subtype FALSE canonical NA NA 1146 None 11 6 0 FALSE 0 0 NA C coding 158 474 697 1170 PB.5345.11 chr9 - 2023 16 novel_in_catalog HNRNPK novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 97 None 6 5 0 FALSE 0 0 NA C coding 440 1320 205 1524 PB.10308.1 chr20 - 1867 15 novel_not_in_catalog ABHD12 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 61 None 2 6 1 TRUE 0 0 NA A coding 341 1023 213 1235 PB.2549.3 chr3 - 2738 5 full-splice_match SSR3 ENST00000265044.6 3716 5 37 941 no_subtype FALSE canonical NA NA 191 None 5 15 0 FALSE 0 0 NA C coding 185 555 59 613 PB.2549.2 chr3 - 3171 6 novel_not_in_catalog SSR3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 151 None 19 17 0 TRUE 0 0 NA C coding 185 555 19 573 PB.10817.4 chr22 + 1450 13 novel_not_in_catalog PARVG novel NA NA NA NA no_subtype FALSE canonical NA NA 1035 None 2 7 0 TRUE 0 0 NA B coding 292 876 155 1030 PB.10817.1 chr22 + 1439 14 novel_in_catalog PARVG novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1109 None 11 2 0 FALSE 0 0 NA B coding 331 993 224 1216 PB.1160.3 chr1 + 3582 12 novel_not_in_catalog CNST novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2158 None 2 14 1 FALSE 0 0 NA B coding 725 2175 187 2361 PB.1160.2 chr1 + 3687 12 novel_not_in_catalog CNST novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2262 None 2 17 2 TRUE 0 0 NA B coding 725 2175 291 2465 PB.1160.1 chr1 + 3548 11 novel_not_in_catalog CNST novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2123 None 13 8 0 TRUE 0 0 NA B coding 516 1548 779 2326 PB.8328.1 chr15 + 3460 13 full-splice_match ALDH1A3 ENST00000329841.9 3924 13 459 5 no_subtype FALSE canonical NA NA 1539 None 2 6 0 FALSE 0 0 NA A coding 512 1536 74 1609 PB.6352.2 chr11 + 1159 7 full-splice_match MS4A12 ENST00000016913.8 1167 7 0 8 no_subtype FALSE canonical NA NA 756 None 5 11 2 FALSE 0 0 NA C coding 267 801 58 858 PB.1160.4 chr1 + 3572 11 novel_not_in_catalog CNST novel NA NA NA NA no_subtype FALSE canonical NA NA 2147 None 8 8 0 FALSE 0 0 NA B coding 781 2343 8 2350 PB.4451.1 chr7 + 1195 12 full-splice_match WBSCR22 ENST00000265758.6 1230 12 31 4 no_subtype FALSE canonical NA NA 818 None 16 4 0 FALSE 0 0 NA C coding 281 843 28 870 PB.3820.1 chr6 - 1336 7 full-splice_match DDAH2 ENST00000375792.7 1688 7 347 5 no_subtype FALSE canonical NA NA 220 None 9 2 0 FALSE 0 0 NA A coding 285 855 285 1139 PB.4451.3 chr7 + 1831 11 full-splice_match WBSCR22 ENST00000463307.5 1815 11 37 -53 no_subtype FALSE canonical NA NA 1453 None 2 11 0 FALSE 0 0 NA C coding 189 567 74 640 PB.4451.2 chr7 + 1172 13 novel_not_in_catalog WBSCR22 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1124 None 2 6 1 TRUE 0 0 NA C coding 281 843 28 870 PB.7688.1 chr14 - 1396 1 novel_in_catalog VCPKMT novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.909.2 chr1 + 3545 3 novel_in_catalog LAMC2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 358 None 3 17 0 FALSE 0 0 NA B coding 135 405 91 495 PB.909.1 chr1 + 1516 2 genic LAMC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 226 None 2 3 1 TRUE 0 0 NA B coding 144 432 181 612 PB.892.1 chr1 + 2795 16 novel_not_in_catalog SOAT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1722 None 61 8 1 FALSE 0 0 NA A coding 407 1221 556 1776 PB.6386.1 chr11 + 1236 2 genic GNG3 novel NA NA NA NA no_subtype FALSE canonical NA NA 304 None 2 12 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.3338.1 chr5 + 3269 14 full-splice_match AGGF1 ENST00000312916.11 4509 14 94 1146 no_subtype FALSE canonical NA NA 2232 None 18 8 0 FALSE 0 0 NA A coding 714 2142 289 2430 PB.8547.1 chr16 - 1878 8 novel_not_in_catalog HIRIP3 novel NA NA NA NA no_subtype TRUE canonical NA NA 72 None 2 4 1 TRUE 0 0 NA A coding 553 1659 8 1666 PB.7541.1 chr13 - 1555 13 novel_not_in_catalog TGDS novel NA NA NA NA no_subtype FALSE canonical NA NA 100 None 9 6 0 TRUE 0 0 NA A coding 350 1050 15 1064 PB.8456.2 chr16 - 2829 14 novel_in_catalog RRN3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 142 None 3 9 0 FALSE 0 0 NA C coding 507 1521 54 1574 PB.8984.1 chr17 + 4004 7 full-splice_match DHRS7B ENST00000395511.7 2175 7 280 -2109 no_subtype TRUE canonical NA NA 812 None 5 21 0 FALSE 0 0 NA A coding 325 975 41 1015 PB.10749.1 chr22 + 1080 6 full-splice_match NOL12 ENST00000359114.8 2854 6 59 1715 no_subtype FALSE canonical NA NA 490 None 2 3 0 FALSE 0 0 NA A coding 213 639 12 650 PB.6851.2 chr12 + 2670 9 full-splice_match STRAP ENST00000541731.1 1698 9 20 -992 no_subtype FALSE canonical NA NA 1152 None 2 15 1 FALSE 0 0 NA C coding 256 768 444 1211 PB.7206.10 chr12 + 2924 1 genic_intron novelGene_949 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 19 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.345.1 chr1 - 2727 22 full-splice_match POMGNT1 ENST00000371984.7 2728 22 -5 6 no_subtype FALSE canonical NA NA 113 None 35 0 0 FALSE 0 0 NA C coding 660 1980 164 2143 PB.345.2 chr1 - 2963 22 novel_not_in_catalog POMGNT1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 98 None 2 5 1 TRUE 0 0 NA C coding 589 1767 149 1915 PB.5362.4 chr9 - 3484 8 intergenic novelGene_833 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 92 None 6 20 3 FALSE 0 0 NA B coding 107 321 3164 3484 PB.6851.1 chr12 + 1770 10 full-splice_match STRAP ENST00000419869.6 1866 10 87 9 no_subtype FALSE canonical NA NA 1217 None 77 5 0 FALSE 0 0 NA C coding 350 1050 227 1276 PB.8392.1 chr16 + 1397 13 full-splice_match THOC6 ENST00000326266.12 1419 13 13 9 no_subtype FALSE canonical NA NA 1228 None 18 1 0 FALSE 0 0 NA A coding 341 1023 284 1306 PB.11027.3 chrX + 3518 4 novel_not_in_catalog NHSL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2518 None 4 2 0 FALSE 0 0 NA B coding 937 2811 27 2837 PB.2220.3 chr3 + 2542 11 novel_not_in_catalog MAPKAPK3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1146 None 12 5 0 TRUE 0 0 NA B coding 382 1146 151 1296 PB.339.2 chr1 - 2912 10 novel_in_catalog TESK2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 307 None 4 4 0 FALSE 0 0 NA C coding 522 1566 394 1959 PB.2220.5 chr3 + 2499 11 novel_not_in_catalog MAPKAPK3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1105 None 36 7 0 FALSE 0 0 NA B coding 382 1146 110 1255 PB.11027.2 chrX + 5883 8 novel_in_catalog NHSL2 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 3584 None 2 15 0 FALSE 0 0 NA B coding 1146 3438 466 3903 PB.2220.8 chr3 + 6188 1 genic_intron novelGene_503 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 33 0 FALSE 0 0 NA A coding 112 336 2792 3127 PB.5807.1 chr10 + 1481 10 novel_in_catalog HNRNPH3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1192 None 3 2 0 FALSE 0 0 NA C coding 346 1038 229 1266 PB.2654.9 chr3 + 3424 7 full-splice_match EIF4A2 ENST00000475653.5 909 7 -16 -2499 no_subtype FALSE canonical NA NA 665 None 2 16 0 FALSE 0 0 NA C coding 219 657 180 836 PB.2555.1 chr3 - 1051 7 novel_not_in_catalog RARRES1 novel NA NA NA NA no_subtype FALSE canonical NA NA 314 None 6 4 0 TRUE 0 0 NA A coding 290 870 43 912 PB.5175.1 chr8 + 1950 15 full-splice_match ADCK5 ENST00000308860.10 1949 15 -12 11 no_subtype TRUE canonical NA NA 1693 None 8 3 0 FALSE 0 0 NA C coding 580 1740 57 1796 PB.7279.1 chr12 + 5685 30 novel_not_in_catalog TPCN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 5283 None 2 25 1 TRUE 0 0 NA B coding 618 1854 290 2143 PB.7279.2 chr12 + 2775 29 novel_not_in_catalog TPCN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2610 None 4 1 0 TRUE 0 0 NA B coding 816 2448 274 2721 PB.5175.2 chr8 + 2007 14 full-splice_match ADCK5 ENST00000529654.5 2027 14 10 10 no_subtype FALSE canonical NA NA 1743 None 7 3 0 FALSE 0 0 NA C coding 203 609 402 1010 PB.25.11 chr1 + 2676 2 novel_not_in_catalog KCNAB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2449 None 5 24 1 TRUE 0 0 NA B coding 121 363 1927 2289 PB.6063.1 chr10 + 1465 12 full-splice_match PLEKHA1 ENST00000368990.7 14010 12 63 12482 no_subtype FALSE canonical NA NA 968 None 23 0 0 FALSE 0 0 NA C coding 404 1212 69 1280 PB.8858.1 chr17 - 5776 26 novel_not_in_catalog MYBBP1A novel NA NA NA NA no_subtype TRUE non_canonical NA NA 232 None 5 21 1 TRUE 0 0 NA A coding 880 2640 35 2674 PB.11045.1 chrX - 3332 9 novel_in_catalog ATRX novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 234 None 4 2 1 FALSE 0 0 NA B coding 1039 3117 215 3331 PB.1608.1 chr2 - 2957 17 full-splice_match MCM6 ENST00000264156.2 3736 17 -46 825 no_subtype FALSE canonical NA NA 214 None 75 4 0 FALSE 0 0 NA A coding 821 2463 108 2570 PB.707.6 chr1 - 5584 16 novel_not_in_catalog ADAR novel NA NA NA NA no_subtype FALSE canonical NA NA 189 None 43 15 0 TRUE 0 0 NA B coding 1200 3600 175 3774 PB.707.4 chr1 - 5630 16 novel_not_in_catalog ADAR novel NA NA NA NA no_subtype FALSE canonical NA NA 157 None 170 15 0 TRUE 0 0 NA B coding 1226 3678 143 3820 PB.10741.6 chr22 + 2631 14 novel_not_in_catalog CYTH4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1239 None 2 18 0 TRUE 0 0 NA C coding 394 1182 44 1225 PB.10741.5 chr22 + 5612 10 novel_in_catalog CYTH4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3718 None 2 25 0 FALSE 0 0 NA C coding 347 1041 60 1100 PB.10741.4 chr22 + 5833 4 novel_not_in_catalog CYTH4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5221 None 3 36 3 TRUE 0 0 NA C coding 105 315 4673 4987 PB.9552.4 chr18 + 2685 9 novel_not_in_catalog SLC14A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1123 None 2 10 1 FALSE 0 0 NA B coding 389 1167 128 1294 PB.10741.2 chr22 + 5638 11 novel_not_in_catalog CYTH4 novel NA NA NA NA no_subtype TRUE canonical NA NA 3732 None 2 18 0 FALSE 0 0 NA C coding 347 1041 84 1124 PB.10741.1 chr22 + 3048 13 full-splice_match CYTH4 ENST00000248901.10 3206 13 151 7 no_subtype FALSE canonical NA NA 1148 None 116 8 0 FALSE 0 0 NA C coding 394 1182 37 1218 PB.7477.1 chr13 - 1114 10 full-splice_match ESD ENST00000378720.7 1192 10 68 10 no_subtype FALSE canonical NA NA 60 None 5 5 0 FALSE 0 0 NA C coding 282 846 116 961 PB.4774.1 chr7 + 2454 11 novel_not_in_catalog DNAJB6 novel NA NA NA NA no_subtype FALSE canonical NA NA 1038 None 21 11 0 TRUE 0 0 NA C coding 326 978 141 1118 PB.5137.11 chr8 - 2840 11 novel_not_in_catalog ST3GAL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 234 None 4 11 2 FALSE 0 0 NA C coding 340 1020 959 1978 PB.4774.3 chr7 + 3268 1 novel_in_catalog DNAJB6 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2168.1 chr3 - 1577 1 genic NME6 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4182.1 chr6 - 4298 3 full-splice_match FBXO30 ENST00000237281.4 9009 3 33 4678 no_subtype FALSE canonical NA NA 118 None 2 14 0 FALSE 0 0 NA A coding 745 2235 135 2369 PB.6209.4 chr11 + 3063 2 novel_not_in_catalog MICAL2 novel NA NA NA NA no_subtype TRUE canonical NA NA 2960 None 2 14 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.9936.1 chr19 + 1593 11 novel_not_in_catalog USF2 novel NA NA NA NA no_subtype TRUE canonical NA NA 945 None 7 5 0 TRUE 0 0 NA A coding 344 1032 1 1032 PB.6209.2 chr11 + 3187 3 novel_not_in_catalog MICAL2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1063 None 4 11 1 TRUE 0 0 NA B coding 107 321 1266 1586 PB.10298.2 chr20 - 6714 2 full-splice_match CD93 ENST00000246006.4 6708 2 -24 18 no_subtype FALSE canonical NA NA 2106 None 18 37 0 FALSE 0 0 NA A coding 652 1956 173 2128 PB.8523.1 chr16 + 2897 1 antisense novelGene_MIR6862-1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 18 0 FALSE 0 0 NA A coding 112 336 1927 2262 PB.6209.1 chr11 + 6776 20 novel_in_catalog MICAL2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2790 None 10 11 0 FALSE 0 0 NA B coding 955 2865 301 3165 PB.7399.3 chr13 + 4182 15 full-splice_match NUP58 ENST00000381718.7 2489 15 -8 -1685 no_subtype FALSE canonical NA NA 1743 None 2 22 0 FALSE 0 0 NA C coding 587 1761 150 1910 PB.2535.1 chr3 + 3419 6 full-splice_match SELT ENST00000471696.5 3469 6 49 1 no_subtype FALSE canonical NA NA 643 None 139 17 0 FALSE 0 0 NA A coding 137 411 201 611 PB.9824.6 chr19 + 3542 19 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2914 None 7 11 1 TRUE 0 0 NA C coding 551 1653 1289 2941 PB.9824.4 chr19 + 2908 18 novel_not_in_catalog ADGRE5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2282 None 240 7 0 FALSE 0 0 NA C coding 743 2229 81 2309 PB.9824.5 chr19 + 927 4 full-splice_match ADGRE5 ENST00000587606.5 572 4 15 -370 no_subtype FALSE canonical NA NA 283 None 5 1 0 FALSE 0 0 NA C coding 177 531 94 624 PB.10862.1 chrX + 1065 7 full-splice_match HCCS ENST00000380762.4 1072 7 3 4 no_subtype FALSE canonical NA NA 801 None 2 1 0 FALSE 0 0 NA A coding 268 804 194 997 PB.4003.1 chr6 + 3207 4 full-splice_match SH3BGRL2 ENST00000369838.5 4653 4 76 1370 no_subtype FALSE canonical NA NA 415 None 9 19 0 FALSE 0 0 NA C coding 107 321 104 424 PB.4003.2 chr6 + 2761 1 genic SH3BGRL2 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 15 15 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5648.3 chr10 - 3291 2 genic_intron novelGene_5 novel NA NA NA NA no_subtype FALSE canonical NA NA 2215 None 2 16 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.4466.3 chr7 + 1807 5 full-splice_match RHBDD2 ENST00000318622.8 1878 5 64 7 no_subtype FALSE canonical NA NA 879 None 2 8 1 FALSE 0 0 NA C coding 223 669 566 1234 PB.4466.2 chr7 + 1670 4 full-splice_match RHBDD2 ENST00000006777.10 1802 4 125 7 no_subtype FALSE canonical NA NA 747 None 12 5 0 FALSE 0 0 NA C coding 364 1092 11 1102 PB.4466.1 chr7 + 1397 4 novel_not_in_catalog RHBDD2 novel NA NA NA NA no_subtype FALSE canonical NA NA 470 None 2 6 0 FALSE 0 0 NA C coding 142 426 400 825 PB.10755.1 chr22 - 3559 10 novel_not_in_catalog TMEM184B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 122 None 13 17 1 TRUE 0 0 NA C coding 407 1221 181 1401 PB.10755.2 chr22 - 2676 1 full-splice_match TMEM184B ENST00000633056.1 4792 1 2114 2 no_subtype FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA C coding 183 549 511 1059 PB.6784.13 chr12 - 1840 3 novel_not_in_catalog CHD4 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 178 None 2 11 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.6784.14 chr12 - 6438 40 full-splice_match CHD4 ENST00000357008.6 6496 40 -42 100 no_subtype FALSE canonical NA NA 128 None 4 5 0 FALSE 0 0 NA C coding 1912 5736 207 5942 PB.6784.15 chr12 - 6335 40 novel_in_catalog CHD4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 85 None 3 4 0 FALSE 0 0 NA C coding 1892 5676 164 5839 PB.8866.1 chr17 + 3577 22 novel_not_in_catalog MINK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2721 None 2 4 0 FALSE 0 0 NA A coding 907 2721 82 2802 PB.11051.3 chrX + 2660 1 novel_in_catalog PGK1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 16 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4482.1 chr7 + 3010 8 full-splice_match GNAI1 ENST00000351004.7 3347 8 328 9 no_subtype FALSE canonical NA NA 919 None 36 15 0 FALSE 0 0 NA A coding 354 1062 46 1107 PB.10070.3 chr19 - 3596 18 full-splice_match PRKD2 ENST00000291281.8 3070 18 -528 2 no_subtype FALSE canonical NA NA 994 None 9 10 0 FALSE 0 0 NA C coding 878 2634 755 3388 PB.2112.1 chr3 + 7623 2 novel_in_catalog ZNF621 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 884 None 2 49 0 FALSE 0 0 NA A coding 328 984 3670 4653 PB.9591.1 chr18 - 2619 1 incomplete-splice_match BCL2 ENST00000398117.1 7461 2 4834 9 no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9136.12 chr17 - 3304 25 novel_not_in_catalog STAT3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 135 None 2 6 1 TRUE 0 0 NA B coding 543 1629 829 2457 PB.6332.1 chr11 + 1815 8 full-splice_match SERPING1 ENST00000278407.8 2002 8 177 10 no_subtype FALSE canonical NA NA 1299 None 118 2 0 FALSE 0 0 NA C coding 500 1500 51 1550 PB.6332.2 chr11 + 1821 7 novel_in_catalog SERPING1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1302 None 10 3 0 FALSE 0 0 NA C coding 500 1500 54 1553 PB.3840.1 chr6 + 1031 6 full-splice_match RNF5 ENST00000375094.3 1168 6 134 3 no_subtype FALSE canonical NA NA 469 None 2 2 0 FALSE 0 0 NA A coding 180 540 25 564 PB.7111.1 chr12 + 5431 10 novel_in_catalog FRS2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1072 None 2 20 0 FALSE 0 0 NA A coding 508 1524 497 2020 PB.6196.1 chr11 + 2138 12 full-splice_match SWAP70 ENST00000318950.10 4882 12 91 2653 no_subtype FALSE canonical NA NA 1663 None 12 0 0 FALSE 0 0 NA C coding 585 1755 13 1767 PB.1777.16 chr2 - 1509 11 incomplete-splice_match SF3B1 ENST00000335508.10 6526 25 54 4963 internal_fragment FALSE canonical NA NA 66 None 39 1 0 FALSE 0 0 NA C coding 490 1470 39 1508 PB.9863.1 chr19 - 2287 6 full-splice_match PLVAP ENST00000252590.8 2305 6 8 10 no_subtype FALSE canonical NA NA 423 None 9 4 0 FALSE 0 0 NA A coding 442 1326 55 1380 PB.3675.1 chr5 - 2495 14 full-splice_match DBN1 ENST00000309007.9 2995 14 108 392 no_subtype FALSE canonical NA NA 198 None 48 0 0 FALSE 0 0 NA C coding 649 1947 113 2059 PB.3675.2 chr5 - 2708 15 full-splice_match DBN1 ENST00000393565.5 2701 15 13 -20 no_subtype FALSE canonical NA NA 189 None 4 9 0 FALSE 0 0 NA C coding 695 2085 104 2188 PB.7305.1 chr12 - 1066 8 full-splice_match RPLP0 ENST00000392514.8 1218 8 100 52 no_subtype FALSE canonical NA NA 29 None 162 1 0 FALSE 0 0 NA A coding 317 951 78 1028 PB.3256.1 chr5 - 2533 17 incomplete-splice_match DHX29 ENST00000251636.9 4502 27 1963 6 5prime_fragment TRUE canonical NA NA 151 None 2 3 0 FALSE 0 0 NA A coding 705 2115 179 2293 PB.3024.1 chr4 - 1390 5 full-splice_match MAD2L1 ENST00000296509.10 5468 5 247 3831 no_subtype FALSE canonical NA NA 166 None 10 6 0 FALSE 0 0 NA A coding 205 615 94 708 PB.11059.1 chrX + 1508 1 full-splice_match VDAC1P1 ENST00000439229.2 848 1 197 -857 no_subtype FALSE canonical NA NA NA None 84 4 0 FALSE 0 0 NA A coding 155 465 186 650 PB.10655.1 chr22 + 2837 5 novel_not_in_catalog UBE2L3 novel NA NA NA NA no_subtype FALSE canonical NA NA 325 None 173 7 0 TRUE 0 0 NA C coding 154 462 16 477 PB.3615.4 chr5 + 3985 32 novel_not_in_catalog CYFIP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3615 None 14 0 0 TRUE 0 0 NA C coding 1253 3759 22 3780 PB.332.1 chr1 + 1348 1 full-splice_match SNORD55,SNORD46 ENST00000364043.1 104 1 -887 -357 no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3615.2 chr5 + 3416 8 full-splice_match CYFIP2 ENST00000622696.4 1294 8 -13 -2109 no_subtype FALSE canonical NA NA 762 None 3 18 0 FALSE 0 0 NA C coding 269 807 97 903 PB.8047.1 chr15 + 2500 3 full-splice_match SERF2 ENST00000249786.8 1537 3 517 -1480 no_subtype FALSE canonical NA NA 134 None 12 19 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8047.2 chr15 + 3063 2 full-splice_match SERF2 ENST00000486144.1 1030 2 14 -2047 no_subtype FALSE canonical NA NA 40 None 4 30 0 FALSE 0 0 NA C coding 110 330 590 919 PB.8047.3 chr15 + 1670 1 novel_in_catalog SERF2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9471.1 chr18 + 935 4 full-splice_match MYL12B ENST00000237500.9 1210 4 258 17 no_subtype FALSE canonical NA NA 432 None 16 6 1 FALSE 0 0 NA A coding 172 516 87 602 PB.565.1 chr1 - 1394 10 full-splice_match WDR77 ENST00000235090.9 2576 10 127 1055 no_subtype FALSE canonical NA NA 195 None 9 1 0 FALSE 0 0 NA A coding 342 1026 81 1106 PB.2096.1 chr3 - 2828 5 genic_intron novelGene_365 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1805 None 9 23 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.10307.3 chr20 + 2816 21 novel_not_in_catalog PYGB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2740 None 6 3 0 TRUE 0 0 NA B coding 843 2529 105 2633 PB.1382.1 chr2 - 1432 6 full-splice_match RAB1A ENST00000409784.7 2447 6 -14 1029 no_subtype FALSE canonical NA NA 228 None 30 0 0 FALSE 0 0 NA C coding 205 615 206 820 PB.6862.2 chr12 - 3788 3 antisense novelGene_ETNK1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 23 None 9 18 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.10767.2 chr22 - 3262 5 full-splice_match CBX6 ENST00000407418.7 6122 5 48 2812 no_subtype FALSE canonical NA NA 145 None 46 10 0 FALSE 0 0 NA C coding 412 1236 77 1312 PB.10767.1 chr22 - 1623 1 incomplete-splice_match CBX6 ENST00000216083.6 3191 5 1536 33 no_subtype FALSE canonical NA NA NA None 14 6 0 FALSE 0 0 NA C coding 145 435 770 1204 PB.539.2 chr1 - 1698 8 novel_in_catalog PSRC1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 64 None 2 2 0 FALSE 0 0 NA C coding 333 999 103 1101 PB.539.1 chr1 - 1718 8 full-splice_match PSRC1 ENST00000369909.6 1742 8 23 1 no_subtype FALSE canonical NA NA 83 None 2 4 0 FALSE 0 0 NA C coding 333 999 122 1120 PB.6160.1 chr11 - 1685 1 full-splice_match UBQLNL ENST00000380184.1 2313 1 652 -24 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A coding 335 1005 33 1037 PB.11135.6 chrX - 2599 10 novel_not_in_catalog LAMP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 190 None 2 4 0 TRUE 0 0 NA B coding 397 1191 127 1317 PB.2280.1 chr3 - 4614 1 incomplete-splice_match PRICKLE2 ENST00000295902.10 8305 8 3679 13 no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10421.3 chr20 - 1525 1 incomplete-splice_match NCOA5 ENST00000290231.10 3220 8 1684 12 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3803.10 chr6 - 1419 10 fusion HLA-C,HLA-B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 92 None 2 11 4 TRUE 0 0 NA B coding 368 1104 20 1123 PB.3803.13 chr6 - 1528 8 fusion HLA-C,HLA-B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 93 None 4 12 1 TRUE 0 0 NA B coding 363 1089 21 1109 PB.3803.12 chr6 - 1454 9 fusion HLA-C,HLA-B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 29 None 2 22 3 TRUE 0 0 NA B coding 364 1092 41 1132 PB.3803.15 chr6 - 1535 9 fusion HLA-C,HLA-B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 92 None 2 22 2 TRUE 0 0 NA B coding 212 636 20 655 PB.3803.14 chr6 - 1540 9 fusion HLA-C,HLA-B novel NA NA NA NA no_subtype FALSE canonical NA NA 94 None 1971 16 1 TRUE 0 0 NA B coding 367 1101 22 1122 PB.3803.17 chr6 - 1513 9 fusion HLA-C,HLA-B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 97 None 4 23 1 TRUE 0 0 NA B coding 398 1194 25 1218 PB.3803.16 chr6 - 1855 12 novel_not_in_catalog HLA-B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 94 None 5 5 0 TRUE 0 0 NA C coding 362 1086 22 1107 PB.7018.1 chr12 - 882 8 full-splice_match CD63 ENST00000257857.8 1070 8 199 -11 no_subtype FALSE canonical NA NA 69 None 19 2 0 FALSE 0 0 NA A coding 238 714 81 794 PB.3803.18 chr6 - 1505 9 fusion HLA-C,HLA-B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 94 None 3 22 1 TRUE 0 0 NA B coding 363 1089 22 1110 PB.2793.1 chr4 + 1540 3 novel_not_in_catalog TBC1D1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1289 None 2 5 0 TRUE 0 0 NA B coding 169 507 361 867 PB.72.2 chr1 + 1461 1 incomplete-splice_match EFHD2 ENST00000375980.8 2419 4 944 15 no_subtype FALSE canonical NA NA NA None 13 19 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.72.1 chr1 + 1783 2 incomplete-splice_match EFHD2 ENST00000375980.8 2419 4 575 61 internal_fragment FALSE canonical NA NA 93 None 2 17 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.402.1 chr1 - 1466 1 antisense novelGene_NFIA_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 73 6 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4576.1 chr7 - 3097 7 novel_not_in_catalog RASA4 novel NA NA NA NA no_subtype FALSE canonical NA NA 172 None 6 16 1 TRUE 0 0 NA C coding 219 657 95 751 PB.6647.1 chr11 + 2715 12 full-splice_match BCO2 ENST00000357685.9 2930 12 26 189 no_subtype FALSE canonical NA NA 1735 None 2 8 0 FALSE 0 0 NA A coding 579 1737 110 1846 PB.4576.3 chr7 - 2901 21 full-splice_match RASA4 ENST00000262940.11 5605 21 5 2699 no_subtype TRUE canonical NA NA 128 None 10 6 0 FALSE 0 0 NA C coding 803 2409 64 2472 PB.551.1 chr1 + 3284 21 full-splice_match STRIP1 ENST00000369795.7 3265 21 15 -34 no_subtype FALSE canonical NA NA 2273 None 30 7 0 FALSE 0 0 NA A coding 837 2511 8 2518 PB.2637.1 chr3 + 1616 3 full-splice_match MAP3K13 ENST00000448876.5 1681 3 55 10 no_subtype FALSE canonical NA NA 159 None 16 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2274.1 chr3 + 2716 1 novel_in_catalog PTPRG novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 20 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.842.9 chr1 + 2495 1 genic_intron novelGene_1291 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.11132.1 chrX - 1536 9 full-splice_match NKAP ENST00000371410.4 5963 9 27 4400 no_subtype TRUE canonical NA NA 526 None 2 4 0 FALSE 0 0 NA A coding 415 1245 141 1385 PB.3224.2 chr5 + 1674 1 novel_in_catalog CARD6 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 10 0 FALSE 0 0 NA C coding 117 351 22 372 PB.8237.2 chr15 - 2606 11 novel_not_in_catalog WDR61 novel NA NA NA NA no_subtype FALSE canonical NA NA 30 None 2 10 0 FALSE 0 0 NA C coding 223 669 1742 2410 PB.8237.1 chr15 - 1184 11 full-splice_match WDR61 ENST00000267973.6 1387 11 199 4 no_subtype FALSE canonical NA NA 34 None 3 0 0 FALSE 0 0 NA C coding 305 915 74 988 PB.3224.1 chr5 + 3138 3 full-splice_match CARD6 ENST00000254691.9 4221 3 188 895 no_subtype FALSE canonical NA NA 852 None 25 5 0 FALSE 0 0 NA C coding 1037 3111 12 3122 PB.1939.1 chr2 + 3533 15 novel_not_in_catalog MLPH novel NA NA NA NA no_subtype FALSE canonical NA NA 3106 None 8 12 1 TRUE 0 0 NA A coding 288 864 2267 3130 PB.8635.1 chr16 + 2909 3 full-splice_match CCL22 ENST00000219235.4 2929 3 12 8 no_subtype FALSE canonical NA NA 230 None 9 18 0 FALSE 0 0 NA C coding 93 279 34 312 PB.86.3 chr1 + 3483 4 full-splice_match SZRD1 ENST00000471507.5 892 4 145 -2736 no_subtype FALSE canonical NA NA 378 None 42 16 0 FALSE 0 0 NA C coding 151 453 26 478 PB.10581.1 chr21 + 1847 20 novel_not_in_catalog PDE9A novel NA NA NA NA no_subtype TRUE canonical NA NA 1624 None 2 2 0 TRUE 0 0 NA B coding 533 1599 37 1635 PB.8943.7 chr17 - 1836 15 full-splice_match NCOR1 ENST00000411510.5 1883 15 -13 60 no_subtype FALSE canonical NA NA 189 None 32 2 0 FALSE 0 0 NA C coding 525 1575 260 1834 PB.8943.6 chr17 - 1835 15 novel_not_in_catalog NCOR1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 172 None 6 6 2 TRUE 0 0 NA C coding 531 1593 243 1835 PB.8943.1 chr17 - 2817 3 genic NCOR1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2552 None 3 28 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.6217.2 chr11 - 1511 10 full-splice_match PSMA1 ENST00000530457.5 1527 10 43 -27 no_subtype FALSE canonical NA NA 416 None 2 6 0 FALSE 0 0 NA C coding 238 714 489 1202 PB.1241.1 chr2 + 2717 14 full-splice_match GPN1 ENST00000264718.7 2496 14 54 -275 no_subtype FALSE canonical NA NA 1048 None 46 14 0 FALSE 0 0 NA A coding 374 1122 10 1131 PB.8943.2 chr17 - 6679 34 novel_not_in_catalog NCOR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 57 None 2 30 2 FALSE 0 0 NA C coding 1868 5604 188 5791 PB.783.1 chr1 + 1281 1 genic_intron novelGene_1275 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8943.9 chr17 - 1850 16 novel_in_catalog NCOR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 189 None 4 2 0 FALSE 0 0 NA C coding 530 1590 260 1849 PB.8943.8 chr17 - 2861 3 novel_not_in_catalog NCOR1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1873 None 2 20 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.1001.1 chr1 - 4433 1 incomplete-splice_match NUCKS1 ENST00000367142.4 6496 7 1684 380 no_subtype FALSE canonical NA NA NA None 2 29 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6551.4 chr11 - 3118 17 novel_not_in_catalog PAK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 45 None 3 4 0 TRUE 0 0 NA C coding 545 1635 233 1867 PB.6551.5 chr11 - 3448 16 novel_not_in_catalog PAK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 541 None 4 6 0 FALSE 0 0 NA C coding 545 1635 563 2197 PB.6015.1 chr10 - 3539 4 novel_not_in_catalog ITPRIP novel NA NA NA NA no_subtype FALSE canonical NA NA 104 None 39 18 2 TRUE 0 0 NA A coding 547 1641 118 1758 PB.4564.1 chr7 + 1416 4 novel_not_in_catalog MUC3A novel NA NA NA NA no_subtype FALSE non_canonical NA NA 197 None 2 21 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.4564.2 chr7 + 1398 4 full-splice_match MUC3A ENST00000614399.1 1093 4 284 -589 no_subtype FALSE canonical NA NA 183 None 4 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6551.1 chr11 - 3314 15 full-splice_match PAK1 ENST00000356341.7 3737 15 107 316 no_subtype FALSE canonical NA NA 404 None 16 7 0 FALSE 0 0 NA C coding 545 1635 426 2060 PB.1250.3 chr2 + 1536 1 incomplete-splice_match YPEL5 ENST00000261353.8 2182 3 642 5 no_subtype FALSE canonical NA NA NA None 28 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4562.1 chr7 + 2934 20 novel_not_in_catalog SRRT novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2745 None 107 4 1 FALSE 0 0 NA C coding 874 2622 197 2818 PB.10628.1 chr22 - 1784 12 full-splice_match UFD1L ENST00000263202.14 1814 12 22 8 no_subtype FALSE canonical NA NA 111 None 11 6 0 FALSE 0 0 NA C coding 307 921 109 1029 PB.8551.1 chr16 - 1413 4 full-splice_match YPEL3 ENST00000398841.5 1588 4 170 5 no_subtype FALSE canonical NA NA 779 None 2 3 0 FALSE 0 0 NA A coding 157 471 549 1019 PB.10628.2 chr22 - 1702 12 novel_in_catalog UFD1L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 51 None 2 6 0 FALSE 0 0 NA C coding 264 792 152 943 PB.3119.1 chr4 + 2116 6 full-splice_match MSMO1 ENST00000261507.10 2269 6 59 94 no_subtype FALSE canonical NA NA 800 None 16 5 0 FALSE 0 0 NA A coding 293 879 115 993 PB.9314.1 chr17 - 3311 1 antisense novelGene_AC006947.1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1021.1 chr1 - 2785 1 novel_in_catalog C1orf132 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2674.1 chr3 + 3201 29 novel_not_in_catalog OPA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3083 None 2 6 2 FALSE 0 0 NA B coding 694 2082 990 3071 PB.10103.1 chr19 - 1740 8 novel_not_in_catalog PIH1D1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 472 None 2 7 0 TRUE 0 0 NA A coding 124 372 814 1185 PB.670.4 chr1 - 3045 5 novel_not_in_catalog CDC42SE1 novel NA NA NA NA no_subtype FALSE canonical NA NA 191 None 20 17 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6452.1 chr11 - 3067 5 genic RP11-1167A19.2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 224 None 2 14 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.10334.4 chr20 + 2924 18 novel_in_catalog AL109923.1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1970 None 2 2 0 FALSE 0 0 NA A coding 533 1599 469 2067 PB.10334.3 chr20 + 2790 1 genic_intron novelGene_333 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10334.2 chr20 + 3651 25 novel_in_catalog ITCH novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2672 None 2 9 1 FALSE 0 0 NA C coding 553 1659 138 1796 PB.10334.1 chr20 + 2957 25 full-splice_match ITCH ENST00000374864.8 6401 25 76 3368 no_subtype FALSE canonical NA NA 2626 None 72 1 0 FALSE 0 0 NA C coding 862 2586 138 2723 PB.9136.18 chr17 - 3216 25 novel_not_in_catalog STAT3 novel NA NA NA NA no_subtype FALSE canonical NA NA 193 None 2 4 1 TRUE 0 0 NA B coding 543 1629 880 2508 PB.6663.3 chr11 - 3704 5 full-splice_match MPZL3 ENST00000446386.2 963 5 14 -2755 no_subtype FALSE canonical NA NA 85 None 6 19 0 FALSE 0 0 NA C coding 108 324 13 336 PB.2301.5 chr3 + 2963 1 genic_intron novelGene_670 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6663.1 chr11 - 1438 1 incomplete-splice_match MPZL3 ENST00000278949.8 3968 6 2526 5 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2301.3 chr3 - 5510 2 genic_intron novelGene_666 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2391 None 2 42 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2301.2 chr3 + 6163 2 genic_intron novelGene_665 novel NA NA NA NA no_subtype FALSE canonical NA NA 1091 None 2 28 0 FALSE 0 0 NA A coding 106 318 4976 5293 PB.2653.1 chr3 + 1650 9 novel_not_in_catalog FETUB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 971 None 16 6 2 TRUE 0 0 NA A coding 234 702 636 1337 PB.9773.1 chr19 + 1905 11 novel_not_in_catalog SMARCA4 novel NA NA NA NA no_subtype FALSE canonical NA NA 1767 None 4 4 0 TRUE 0 0 NA B coding 577 1731 175 1905 PB.10401.4 chr20 + 2660 6 novel_not_in_catalog YWHAB novel NA NA NA NA no_subtype FALSE non_canonical NA NA 892 None 3 4 0 FALSE 0 0 NA C coding 246 738 209 946 PB.9773.3 chr19 + 3663 27 novel_not_in_catalog SMARCA4 novel NA NA NA NA no_subtype FALSE canonical NA NA 3392 None 2 1 1 TRUE 0 0 NA B coding 1088 3264 159 3422 PB.3512.3 chr5 + 3922 16 novel_not_in_catalog MATR3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2831 None 2 13 1 TRUE 0 0 NA C coding 847 2541 339 2879 PB.9773.4 chr19 + 3772 28 novel_not_in_catalog SMARCA4 novel NA NA NA NA no_subtype TRUE canonical NA NA 3281 None 5 2 0 TRUE 0 0 NA B coding 1088 3264 48 3311 PB.2445.5 chr3 - 5638 5 genic OSBPL11 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 242 None 3 32 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.8644.5 chr16 + 3647 14 full-splice_match ADGRG1 ENST00000562631.5 4042 14 389 6 no_subtype FALSE canonical NA NA 2076 None 8 9 0 FALSE 0 0 NA C coding 687 2061 144 2204 PB.10577.2 chr21 + 2947 15 full-splice_match ABCG1 ENST00000398449.7 2998 15 48 3 no_subtype FALSE canonical NA NA 1869 None 57 5 0 FALSE 0 0 NA C coding 666 1998 98 2095 PB.8644.7 chr16 + 3628 14 novel_in_catalog ADGRG1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2057 None 10 10 1 FALSE 0 0 NA C coding 687 2061 125 2185 PB.8644.6 chr16 + 3667 14 novel_in_catalog ADGRG1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 2094 None 3 10 1 FALSE 0 0 NA C coding 693 2079 144 2222 PB.8644.1 chr16 + 3700 14 novel_in_catalog ADGRG1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 2131 None 11 11 0 FALSE 0 0 NA C coding 687 2061 199 2259 PB.10481.1 chr20 + 3220 15 novel_not_in_catalog ARFGAP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1938 None 29 22 0 TRUE 0 0 NA B coding 406 1218 111 1328 PB.3940.1 chr6 + 1266 4 novel_not_in_catalog MAD2L1BP novel NA NA NA NA no_subtype FALSE canonical NA NA 352 None 2 4 0 TRUE 0 0 NA A coding 274 822 37 858 PB.8644.2 chr16 + 3694 14 novel_in_catalog ADGRG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2124 None 3 10 1 FALSE 0 0 NA C coding 693 2079 174 2252 PB.1255.1 chr2 - 2672 24 novel_not_in_catalog CAPN13 novel NA NA NA NA no_subtype TRUE canonical NA NA 141 None 4 5 0 TRUE 0 0 NA A coding 669 2007 174 2180 PB.5447.1 chr9 - 5575 6 novel_not_in_catalog FAM225B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 91 None 2 43 3 TRUE 0 0 NA A coding 102 306 336 641 PB.9002.5 chr17 - 3699 2 novel_not_in_catalog KIAA0100 novel NA NA NA NA no_subtype FALSE canonical NA NA 1757 None 4 21 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.519.1 chr1 + 3082 9 full-splice_match VCAM1 ENST00000294728.6 3083 9 -8 9 no_subtype FALSE canonical NA NA 2168 None 480 5 0 FALSE 0 0 NA C coding 739 2217 110 2326 PB.6207.5 chr11 + 2910 5 novel_not_in_catalog USP47 novel NA NA NA NA no_subtype FALSE canonical NA NA 2520 None 2 23 1 TRUE 0 0 NA C coding 157 471 2222 2692 PB.2999.2 chr4 - 2205 12 novel_in_catalog LEF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 19 None 2 8 0 FALSE 0 0 NA A coding 331 993 11 1003 PB.9002.1 chr17 - 7411 39 full-splice_match KIAA0100 ENST00000528896.6 7407 39 -14 10 no_subtype TRUE canonical NA NA 157 None 2 11 0 FALSE 0 0 NA C coding 2235 6705 90 6794 PB.10620.1 chr22 - 912 6 full-splice_match BID ENST00000399774.7 2167 6 49 1206 no_subtype FALSE canonical NA NA 63 None 6 1 0 FALSE 0 0 NA A coding 195 585 122 706 PB.8177.4 chr15 - 2118 10 full-splice_match AAGAB ENST00000261880.9 2841 10 79 644 no_subtype FALSE canonical NA NA 99 None 25 7 0 FALSE 0 0 NA C coding 315 945 27 971 PB.9169.9 chr17 + 2058 13 novel_in_catalog GRN novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1618 None 2 1 0 FALSE 0 0 NA C coding 572 1716 38 1753 PB.2197.1 chr3 + 3481 23 novel_not_in_catalog APEH novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3219 None 2 5 1 TRUE 0 0 NA B coding 356 1068 13 1080 PB.9183.6 chr17 - 3659 16 novel_not_in_catalog ARHGAP27 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 158 None 3 19 1 TRUE 0 0 NA C coding 312 936 102 1037 PB.9183.2 chr17 - 3764 17 novel_in_catalog ARHGAP27 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 208 None 31 16 0 FALSE 0 0 NA C coding 689 2067 152 2218 PB.9183.3 chr17 - 3662 16 full-splice_match ARHGAP27 ENST00000532038.5 3694 16 22 10 no_subtype FALSE canonical NA NA 171 None 41 15 0 FALSE 0 0 NA C coding 667 2001 115 2115 PB.7980.1 chr15 - 1040 5 full-splice_match EMC7 ENST00000256545.8 1155 5 67 48 no_subtype FALSE canonical NA NA 278 None 9 2 0 FALSE 0 0 NA A coding 242 726 43 768 PB.5937.6 chr10 - 1548 7 novel_not_in_catalog BLNK novel NA NA NA NA no_subtype FALSE canonical NA NA 180 None 4 5 1 FALSE 0 0 NA C coding 126 378 384 761 PB.5189.1 chr8 - 1373 2 full-splice_match COMMD5 ENST00000450361.2 1573 2 204 -4 no_subtype FALSE canonical NA NA 161 None 3 6 0 FALSE 0 0 NA C coding 224 672 219 890 PB.5189.2 chr8 - 1271 2 full-splice_match COMMD5 ENST00000402718.4 1305 2 16 18 no_subtype FALSE canonical NA NA 59 None 4 4 0 FALSE 0 0 NA C coding 224 672 117 788 PB.1015.1 chr1 + 2479 1 genic_intron novelGene_1389 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4834.2 chr8 + 2661 7 novel_in_catalog R3HCC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1153 None 3 10 0 FALSE 0 0 NA C coding 217 651 619 1269 PB.6328.1 chr11 - 3725 8 novel_in_catalog TNKS1BP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 227 None 7 2 0 FALSE 0 0 NA B coding 1053 3159 102 3260 PB.9183.8 chr17 - 3128 9 novel_not_in_catalog ARHGAP27 novel NA NA NA NA no_subtype FALSE canonical NA NA 595 None 2 17 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.4834.1 chr8 + 1556 8 full-splice_match R3HCC1 ENST00000265806.10 1773 8 214 3 no_subtype FALSE canonical NA NA 1246 None 34 3 0 FALSE 0 0 NA C coding 253 759 616 1374 PB.7197.1 chr12 + 2994 11 full-splice_match PARPBP ENST00000327680.6 3014 11 14 6 no_subtype FALSE canonical NA NA 1430 None 2 10 0 FALSE 0 0 NA A coding 579 1737 32 1768 PB.3206.1 chr5 + 3129 11 novel_not_in_catalog SKP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2664 None 34 17 1 TRUE 0 0 NA A coding 424 1272 170 1441 PB.3796.1 chr6 - 3024 9 antisense novelGene_BTN3A1_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 262 None 2 22 4 FALSE 0 0 NA A coding 211 633 156 788 PB.3796.2 chr6 + 5703 2 novel_not_in_catalog BTN3A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 4013 None 5 29 0 TRUE 0 0 NA B coding 117 351 3357 3707 PB.6269.1 chr11 + 3969 30 novel_not_in_catalog NAT10 novel NA NA NA NA no_subtype FALSE canonical NA NA 3152 None 12 4 0 TRUE 0 0 NA B coding 1025 3075 184 3258 PB.6269.2 chr11 + 4092 31 novel_not_in_catalog NAT10 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3276 None 5 11 1 TRUE 0 0 NA B coding 1025 3075 308 3382 PB.9038.2 chr17 - 1920 3 full-splice_match EVI2B ENST00000577894.1 1597 3 13 -336 no_subtype FALSE canonical NA NA 114 None 3 9 0 FALSE 0 0 NA A coding 463 1389 164 1552 PB.3495.6 chr5 - 1914 10 novel_not_in_catalog H2AFY novel NA NA NA NA no_subtype FALSE canonical NA NA 183 None 8 5 0 TRUE 0 0 NA C coding 368 1104 217 1320 PB.2621.1 chr3 + 3686 22 novel_in_catalog YEATS2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3320 None 3 7 0 FALSE 0 0 NA A coding 1033 3099 224 3322 PB.2363.2 chr3 + 3137 6 novel_not_in_catalog TRAT1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1892 None 2 19 1 FALSE 0 0 NA C coding 142 426 1722 2147 PB.3125.4 chr4 + 2868 1 incomplete-splice_match CLCN3 ENST00000504131.6 5592 14 2722 3 no_subtype FALSE canonical NA NA NA None 4 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.10401.8 chr20 + 1400 1 incomplete-splice_match YWHAB ENST00000353703.8 3049 6 1272 378 no_subtype FALSE canonical NA NA NA None 15 3 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.511.1 chr1 + 2917 1 incomplete-splice_match SLC35A3 ENST00000465289.5 5533 6 2610 7 no_subtype FALSE canonical NA NA NA None 4 27 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.3125.1 chr4 + 3037 13 full-splice_match CLCN3 ENST00000513761.5 6692 13 72 3583 no_subtype FALSE canonical NA NA 2853 None 10 1 0 FALSE 0 0 NA C coding 818 2454 488 2941 PB.3125.2 chr4 + 4113 13 novel_in_catalog CLCN3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2491 None 3 14 0 FALSE 0 0 NA C coding 839 2517 131 2647 PB.4553.1 chr7 - 5309 2 novel_not_in_catalog TSC22D4 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 116 None 2 31 0 TRUE 0 0 NA C coding 259 777 738 1514 PB.4764.10 chr7 - 3509 23 novel_not_in_catalog KMT2C novel NA NA NA NA no_subtype FALSE canonical NA NA 23 None 2 0 0 TRUE 0 0 NA B coding 1161 3483 25 3507 PB.3411.2 chr5 + 2806 24 novel_not_in_catalog WDR36 novel NA NA NA NA no_subtype FALSE canonical NA NA 2636 None 5 3 0 TRUE 0 0 NA B coding 895 2685 99 2783 PB.4201.1 chr6 - 6057 12 novel_not_in_catalog SYNE1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1421 None 2 34 2 TRUE 0 0 NA B coding 786 2358 27 2384 PB.7988.3 chr15 - 3793 29 novel_in_catalog AQR novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 146 None 5 5 0 FALSE 0 0 NA C coding 1142 3426 72 3497 PB.7988.1 chr15 - 5784 35 full-splice_match AQR ENST00000156471.9 9694 35 143 3767 no_subtype FALSE canonical NA NA 158 None 4 32 2 FALSE 0 0 NA C coding 1485 4455 84 4538 PB.6430.1 chr11 + 2455 18 full-splice_match POLA2 ENST00000265465.7 3744 18 219 1070 no_subtype FALSE canonical NA NA 1959 None 4 9 0 FALSE 0 0 NA A coding 598 1794 313 2106 PB.121.5 chr1 + 2769 1 genic_intron novelGene_210 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8188.1 chr15 - 1872 1 full-splice_match RP11-673C5.1 ENST00000569046.1 646 1 278 -1504 no_subtype FALSE canonical NA NA NA None 4 5 0 FALSE 0 0 NA A coding 84 252 114 365 PB.6750.4 chr11 - 1261 7 full-splice_match THYN1 ENST00000341541.7 1299 7 30 8 no_subtype FALSE canonical NA NA 475 None 3 11 0 FALSE 0 0 NA C coding 225 675 433 1107 PB.1507.1 chr2 - 3408 20 incomplete-splice_match REV1 ENST00000393445.7 4686 23 -44 1322 internal_fragment TRUE canonical NA NA 201 None 2 5 0 FALSE 0 0 NA B coding 1065 3195 212 3406 PB.6750.1 chr11 - 3135 5 novel_in_catalog THYN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2202 None 4 26 0 FALSE 0 0 NA C coding 176 528 2155 2682 PB.5457.1 chr9 + 2795 11 novel_not_in_catalog RGS3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1833 None 3 5 0 FALSE 0 0 NA B coding 519 1557 460 2016 PB.5457.2 chr9 + 2650 10 incomplete-splice_match RGS3 ENST00000343817.9 3689 16 1022 17 internal_fragment FALSE canonical NA NA 1696 None 12 4 0 FALSE 0 0 NA B coding 519 1557 323 1879 PB.5457.3 chr9 + 3145 3 novel_not_in_catalog RGS3 novel NA NA NA NA no_subtype FALSE canonical NA NA 248 None 2 4 1 FALSE 0 0 NA B coding 350 1050 249 1298 PB.3139.1 chr4 - 1580 8 full-splice_match RWDD4 ENST00000326397.9 2641 8 81 980 no_subtype FALSE canonical NA NA 216 None 10 6 0 FALSE 0 0 NA A coding 188 564 193 756 PB.2323.1 chr3 + 1676 1 novel_in_catalog ARL13B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.418.1 chr1 - 1381 3 antisense novelGene_LEPROT_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 24 None 4 7 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.418.3 chr1 - 1372 3 antisense novelGene_LEPROT_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 21 None 2 6 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8745.1 chr16 - 1992 11 full-splice_match LDHD ENST00000450168.2 1966 11 -9 -17 no_subtype FALSE canonical NA NA 132 None 15 6 0 FALSE 0 0 NA A coding 484 1452 61 1512 PB.418.4 chr1 - 1381 3 antisense novelGene_LEPROT_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 27 None 3 6 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8213.3 chr15 - 3547 25 novel_in_catalog MAN2C1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 542 None 2 4 0 FALSE 0 0 NA B coding 880 2640 796 3435 PB.6914.2 chr12 - 3193 22 novel_not_in_catalog NELL2 novel NA NA NA NA no_subtype TRUE canonical NA NA 62 None 8 3 0 TRUE 0 0 NA B coding 816 2448 94 2541 PB.680.1 chr1 - 2689 9 antisense novelGene_SNX27_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2316 None 2 13 3 FALSE 0 0 NA B coding 114 342 1251 1592 PB.6914.1 chr12 - 3534 21 novel_not_in_catalog NELL2 novel NA NA NA NA no_subtype FALSE canonical NA NA 492 None 6 4 0 TRUE 0 0 NA B coding 816 2448 438 2885 PB.10167.1 chr19 + 5604 17 novel_not_in_catalog LENG8 novel NA NA NA NA no_subtype TRUE canonical NA NA 3430 None 25 33 1 TRUE 0 0 NA C coding 874 2622 162 2783 PB.3472.1 chr5 - 1799 1 novel_in_catalog AFF4 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA B coding 123 369 1149 1517 PB.11193.1 chrX - 4311 11 novel_not_in_catalog TREX2 novel NA NA NA NA no_subtype FALSE canonical NA NA 120 None 2 15 0 FALSE 0 0 NA B coding 358 1074 13 1086 PB.10167.4 chr19 + 3648 16 full-splice_match LENG8 ENST00000326764.9 3991 16 322 21 no_subtype FALSE canonical NA NA 2397 None 13 7 0 FALSE 0 0 NA C coding 800 2400 158 2557 PB.10602.1 chr21 - 1227 8 novel_not_in_catalog PTTG1IP novel NA NA NA NA no_subtype FALSE canonical NA NA 207 None 14 9 0 TRUE 0 0 NA A coding 180 540 93 632 PB.584.2 chr1 - 3255 5 novel_not_in_catalog BCL2L15 novel NA NA NA NA no_subtype FALSE canonical NA NA 318 None 4 26 2 TRUE 0 0 NA B coding 173 519 192 710 PB.7603.1 chr14 - 4417 27 novel_not_in_catalog SUPT16H novel NA NA NA NA no_subtype TRUE canonical NA NA 147 None 20 7 0 TRUE 0 0 NA C coding 1047 3141 82 3222 PB.1833.1 chr2 + 6058 31 incomplete-splice_match PIKFYVE ENST00000264380.8 9901 42 1738 2105 internal_fragment FALSE canonical NA NA 4601 None 4 12 0 FALSE 0 0 NA A coding 1494 4482 233 4714 PB.7603.6 chr14 - 3518 26 full-splice_match SUPT16H ENST00000216297.6 4684 26 233 933 no_subtype FALSE canonical NA NA 172 None 24 0 0 FALSE 0 0 NA C coding 1047 3141 107 3247 PB.4698.3 chr7 - 7313 12 full-splice_match CREB3L2 ENST00000330387.10 7412 12 -28 127 no_subtype FALSE canonical NA NA 482 None 2 42 0 FALSE 0 0 NA C coding 520 1560 381 1940 PB.7603.9 chr14 - 1406 11 incomplete-splice_match SUPT16H ENST00000216297.6 4684 26 231 3047 internal_fragment FALSE canonical NA NA 174 None 2 1 0 FALSE 0 0 NA C coding 432 1296 109 1404 PB.7603.8 chr14 - 1469 12 incomplete-splice_match SUPT16H ENST00000216297.6 4684 26 250 2965 internal_fragment FALSE canonical NA NA 155 None 4 0 0 FALSE 0 0 NA C coding 460 1380 90 1469 PB.6987.2 chr12 - 2929 10 novel_in_catalog SPRYD3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 90 None 2 15 0 FALSE 0 0 NA C coding 365 1095 609 1703 PB.6987.1 chr12 - 2620 11 full-splice_match SPRYD3 ENST00000301463.8 2932 11 19 293 no_subtype FALSE canonical NA NA 91 None 117 7 0 FALSE 0 0 NA C coding 431 1293 102 1394 PB.10014.2 chr19 - 3096 1 novel_in_catalog CEACAM7 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10014.3 chr19 - 3827 5 novel_not_in_catalog CEACAM7 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 149 None 5 16 1 TRUE 0 0 NA B coding 265 795 86 880 PB.10014.1 chr19 - 2229 4 novel_not_in_catalog CEACAM7 novel NA NA NA NA no_subtype FALSE canonical NA NA 161 None 15 10 1 TRUE 0 0 NA B coding 262 786 98 883 PB.10917.1 chrX + 1970 2 full-splice_match MID1IP1 ENST00000336949.6 2536 2 554 12 no_subtype FALSE canonical NA NA 127 None 22 4 0 FALSE 0 0 NA A coding 183 549 392 940 PB.10261.2 chr20 + 2953 2 genic EIF4EP1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2691 None 2 19 1 FALSE 0 0 NA C non_coding NA NA NA NA PB.10014.5 chr19 - 1967 4 novel_in_catalog CEACAM7 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 169 None 2 4 0 FALSE 0 0 NA B coding 265 795 106 900 PB.8699.1 chr16 + 3651 16 full-splice_match CDH3 ENST00000264012.8 4929 16 17 1261 no_subtype FALSE canonical NA NA 2807 None 4 6 0 FALSE 0 0 NA A coding 829 2487 528 3014 PB.6593.2 chr11 + 2924 2 full-splice_match ANKRD49 ENST00000544253.1 3002 2 -4 82 no_subtype FALSE canonical NA NA 32 None 4 14 0 FALSE 0 0 NA C coding 125 375 123 497 PB.10177.1 chr19 + 2364 13 novel_not_in_catalog EPN1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1759 None 2 2 0 TRUE 0 0 NA A coding 576 1728 235 1962 PB.5742.1 chr10 - 2893 21 full-splice_match CUL2 ENST00000374749.7 4208 21 11 1304 no_subtype FALSE canonical NA NA 177 None 5 3 0 FALSE 0 0 NA C coding 745 2235 200 2434 PB.4021.1 chr6 - 3072 29 novel_not_in_catalog SNX14 novel NA NA NA NA no_subtype FALSE canonical NA NA 246 None 32 0 0 TRUE 0 0 NA B coding 930 2790 128 2917 PB.1986.1 chr3 + 1425 6 full-splice_match ARPC4 ENST00000397261.7 2582 6 527 630 no_subtype FALSE canonical NA NA 538 None 82 6 0 FALSE 0 0 NA A coding 168 504 38 541 PB.6738.2 chr11 + 1969 5 novel_in_catalog TMEM45B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 726 None 5 11 0 FALSE 0 0 NA C coding 275 825 11 835 PB.6738.1 chr11 + 3457 6 full-splice_match TMEM45B ENST00000281441.7 2234 6 35 -1258 no_subtype FALSE canonical NA NA 769 None 42 26 0 FALSE 0 0 NA C coding 275 825 54 878 PB.7098.1 chr12 + 5550 15 full-splice_match CAND1 ENST00000545606.5 11251 15 360 5341 no_subtype FALSE canonical NA NA 3545 None 49 8 0 FALSE 0 0 NA C coding 1230 3690 78 3767 PB.3561.1 chr5 - 3693 32 full-splice_match LARS ENST00000394434.6 4766 32 22 1051 no_subtype FALSE canonical NA NA 151 None 54 1 0 FALSE 0 0 NA A coding 1176 3528 146 3673 PB.7098.2 chr12 + 1379 1 novel_in_catalog CAND1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.537.1 chr1 + 3178 23 novel_not_in_catalog KIAA1324 novel NA NA NA NA no_subtype FALSE canonical NA NA 2892 None 66 1 0 TRUE 0 0 NA B coding 911 2733 226 2958 PB.7098.4 chr12 + 3416 1 novel_in_catalog CAND1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4945.1 chr8 + 1527 3 novel_not_in_catalog AC022182.1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1483 None 2 14 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.537.2 chr1 + 2806 21 novel_not_in_catalog KIAA1324 novel NA NA NA NA no_subtype FALSE canonical NA NA 2643 None 4 1 0 TRUE 0 0 NA B coding 930 2790 16 2805 PB.3726.1 chr6 - 3121 2 genic_intron novelGene_53 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2831 None 3 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6348.1 chr11 - 1063 4 full-splice_match MRPL16 ENST00000300151.4 1182 4 98 21 no_subtype FALSE canonical NA NA 171 None 8 2 0 FALSE 0 0 NA A coding 251 753 117 869 PB.9120.5 chr17 + 1899 3 novel_in_catalog EIF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 347 None 2 5 0 FALSE 0 0 NA C coding 105 315 153 467 PB.9745.2 chr19 + 1676 2 incomplete-splice_match PIN1 ENST00000587625.5 878 3 270 -1068 internal_fragment FALSE canonical NA NA 23 None 2 11 0 FALSE 0 0 NA C coding 123 369 395 763 PB.11100.3 chrX - 3830 1 novel_in_catalog TSC22D3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 12 10 0 FALSE 0 0 NA C coding 41 123 252 374 PB.9745.1 chr19 + 982 4 full-splice_match PIN1 ENST00000247970.8 997 4 12 3 no_subtype FALSE canonical NA NA 392 None 4 2 0 FALSE 0 0 NA C coding 163 489 11 499 PB.6310.1 chr11 + 5724 34 novel_not_in_catalog MADD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 4749 None 4 12 0 TRUE 0 0 NA B coding 1541 4623 229 4851 PB.6310.3 chr11 + 5829 33 novel_in_catalog MADD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4854 None 3 11 1 FALSE 0 0 NA B coding 1545 4635 322 4956 PB.6310.2 chr11 + 5829 33 novel_not_in_catalog MADD novel NA NA NA NA no_subtype FALSE canonical NA NA 4854 None 3 7 0 FALSE 0 0 NA B coding 1587 4761 196 4956 PB.797.1 chr1 - 1178 8 full-splice_match ITLN1 ENST00000326245.3 1183 8 0 5 no_subtype FALSE canonical NA NA 110 None 10 1 0 FALSE 0 0 NA C coding 313 939 117 1055 PB.6310.9 chr11 + 5733 34 novel_in_catalog MADD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4755 None 2 8 1 FALSE 0 0 NA B coding 1564 4692 166 4857 PB.6310.8 chr11 + 5830 33 novel_in_catalog MADD novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 4855 None 7 10 1 FALSE 0 0 NA B coding 1588 4764 194 4957 PB.5875.1 chr10 + 1672 1 genic TMEM254 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6273.7 chr11 + 799 1 novel_in_catalog RP1-68D18.2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 13 1 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6273.6 chr11 + 2012 1 novel_in_catalog CD44 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6273.1 chr11 + 4265 9 full-splice_match CD44 ENST00000263398.10 4589 9 304 20 no_subtype FALSE canonical NA NA 1011 None 219 16 0 FALSE 0 0 NA C coding 361 1083 131 1213 PB.9638.2 chr19 - 1837 12 novel_not_in_catalog POLR2E novel NA NA NA NA no_subtype FALSE non_canonical NA NA 57 None 13 19 4 TRUE 0 0 NA C coding 210 630 1 630 PB.9638.1 chr19 - 1256 8 full-splice_match POLR2E ENST00000615234.4 2831 8 -17 1592 no_subtype FALSE canonical NA NA 116 None 7 8 0 FALSE 0 0 NA C coding 210 630 60 689 PB.1553.2 chr2 + 1583 5 novel_not_in_catalog IL1RN novel NA NA NA NA no_subtype FALSE canonical NA NA 1453 None 25 8 0 TRUE 0 0 NA B coding 143 429 24 452 PB.1363.1 chr2 - 1694 2 novel_in_catalog USP34 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 64 None 2 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8006.1 chr15 + 3555 5 full-splice_match VPS18 ENST00000220509.9 3895 5 337 3 no_subtype FALSE canonical NA NA 2198 None 25 5 0 FALSE 0 0 NA C coding 973 2919 3 2921 PB.6273.8 chr11 + 1662 1 incomplete-splice_match CD44 ENST00000263398.10 4589 9 2912 16 no_subtype FALSE canonical NA NA NA None 12 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.1762.1 chr2 + 2672 1 incomplete-splice_match NABP1 ENST00000410026.6 11521 6 4136 4714 no_subtype FALSE canonical NA NA NA None 15 25 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8006.2 chr15 + 3878 5 novel_not_in_catalog VPS18 novel NA NA NA NA no_subtype FALSE canonical NA NA 2520 None 3 9 1 TRUE 0 0 NA C coding 965 2895 349 3243 PB.7024.5 chr12 + 2597 24 novel_in_catalog DGKA novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2260 None 18 0 0 FALSE 0 0 NA B coding 735 2205 137 2341 PB.10275.1 chr20 - 2741 1 genic_intron novelGene_75 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7024.7 chr12 + 2663 24 novel_not_in_catalog DGKA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2334 None 3 4 0 TRUE 0 0 NA B coding 735 2205 211 2415 PB.3102.1 chr4 - 1993 3 full-splice_match SFRP2 ENST00000274063.4 2032 3 37 2 no_subtype FALSE canonical NA NA 750 None 13 4 0 FALSE 0 0 NA A coding 295 885 249 1133 PB.7024.1 chr12 + 2681 24 novel_not_in_catalog DGKA novel NA NA NA NA no_subtype FALSE canonical NA NA 2346 None 62 2 1 FALSE 0 0 NA B coding 593 1779 649 2427 PB.7024.2 chr12 + 2682 24 novel_not_in_catalog DGKA novel NA NA NA NA no_subtype FALSE canonical NA NA 2342 None 4 1 0 FALSE 0 0 NA B coding 718 2154 270 2423 PB.7024.3 chr12 + 1458 5 novel_not_in_catalog DGKA novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1227 None 2 4 0 TRUE 0 0 NA B non_coding NA NA NA NA PB.10026.1 chr19 + 2912 11 novel_in_catalog CIC novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1942 None 3 7 2 FALSE 0 0 NA A coding 677 2031 277 2307 PB.11100.4 chrX - 3091 2 full-splice_match TSC22D3 ENST00000503515.1 551 2 0 -2540 no_subtype FALSE canonical NA NA 373 None 16 4 0 FALSE 0 0 NA C coding 108 324 252 575 PB.3681.1 chr5 + 1879 11 full-splice_match RMND5B ENST00000313386.8 1929 11 21 29 no_subtype FALSE canonical NA NA 1308 None 3 5 0 FALSE 0 0 NA C coding 393 1179 191 1369 PB.4767.3 chr7 + 3042 5 novel_in_catalog INSIG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1056 None 2 13 0 FALSE 0 0 NA C coding 277 831 253 1083 PB.3681.2 chr5 + 1727 10 novel_in_catalog RMND5B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1148 None 3 3 0 FALSE 0 0 NA C coding 393 1179 31 1209 PB.6985.11 chr12 + 2645 7 incomplete-splice_match EIF4B ENST00000262056.13 4148 15 1500 3 internal_fragment FALSE canonical NA NA 581 None 23 16 0 FALSE 0 0 NA C coding 138 414 246 659 PB.714.3 chr1 + 1938 8 novel_in_catalog FLAD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1730 None 4 4 0 FALSE 0 0 NA C coding 490 1470 394 1863 PB.4376.7 chr7 - 3520 26 novel_not_in_catalog ELMO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 81 None 6 3 0 TRUE 0 0 NA B coding 727 2181 155 2335 PB.4376.4 chr7 - 3564 26 novel_not_in_catalog ELMO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 122 None 54 3 0 TRUE 0 0 NA B coding 727 2181 196 2376 PB.106.1 chr1 - 1925 4 full-splice_match PLA2G2D ENST00000375105.7 2672 4 20 727 no_subtype FALSE canonical NA NA 79 None 12 7 0 FALSE 0 0 NA A coding 145 435 40 474 PB.8310.2 chr15 + 3210 13 novel_in_catalog CHD2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1966 None 2 13 0 FALSE 0 0 NA C coding 545 1635 573 2207 PB.4376.9 chr7 - 2717 1 novel_in_catalog ELMO1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4376.8 chr7 - 3480 26 novel_not_in_catalog ELMO1 novel NA NA NA NA no_subtype FALSE canonical NA NA 38 None 5 4 0 TRUE 0 0 NA B coding 727 2181 112 2292 PB.6971.3 chr12 + 3035 7 novel_not_in_catalog ATF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1396 None 9 24 0 FALSE 0 0 NA C coding 271 813 726 1538 PB.1964.1 chr2 - 1977 6 full-splice_match THAP4 ENST00000407315.5 2367 6 365 25 no_subtype FALSE canonical NA NA 144 None 2 36 1 FALSE 0 0 NA A coding 577 1731 68 1798 PB.6182.6 chr11 + 2925 21 novel_not_in_catalog PPFIBP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2198 None 3 4 0 TRUE 0 0 NA B coding 726 2178 213 2390 PB.4959.1 chr8 + 3141 1 genic_intron novelGene_638 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6182.4 chr11 + 3456 23 novel_not_in_catalog PPFIBP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2722 None 6 5 0 TRUE 0 0 NA B coding 832 2496 419 2914 PB.6182.5 chr11 + 2893 22 novel_not_in_catalog PPFIBP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2166 None 6 3 0 TRUE 0 0 NA B coding 718 2154 205 2358 PB.6182.2 chr11 + 3222 24 novel_not_in_catalog PPFIBP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 2495 None 2 14 0 TRUE 0 0 NA B coding 442 1326 218 1543 PB.8141.1 chr15 + 1970 15 full-splice_match SNX1 ENST00000559844.5 1971 15 2 -1 no_subtype FALSE canonical NA NA 1530 None 70 1 0 FALSE 0 0 NA C coding 522 1566 13 1578 PB.5048.5 chr8 - 2805 6 full-splice_match YWHAZ ENST00000353245.7 2829 6 -19 43 no_subtype FALSE canonical NA NA 92 None 101 8 0 FALSE 0 0 NA C coding 245 735 104 838 PB.6182.1 chr11 + 3337 25 novel_not_in_catalog PPFIBP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2610 None 6 3 0 TRUE 0 0 NA B coding 876 2628 175 2802 PB.2134.1 chr3 - 3842 7 novel_in_catalog ZDHHC3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 202 None 4 18 0 FALSE 0 0 NA C coding 328 984 230 1213 PB.8121.3 chr15 - 2740 5 novel_not_in_catalog MYO1E novel NA NA NA NA no_subtype TRUE non_canonical NA NA 374 None 3 11 1 TRUE 0 0 NA B coding 123 369 372 740 PB.9986.2 chr19 + 2083 1 novel_in_catalog ZFP36 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 18 8 0 FALSE 0 0 NA C coding 237 711 1254 1964 PB.9986.1 chr19 + 1741 2 full-splice_match ZFP36 ENST00000597629.1 1786 2 35 10 no_subtype FALSE canonical NA NA 81 None 54 10 0 FALSE 0 0 NA C coding 332 996 40 1035 PB.6382.1 chr11 - 3277 2 full-splice_match INTS5 ENST00000330574.2 3285 2 -7 15 no_subtype FALSE canonical NA NA 140 None 49 2 0 FALSE 0 0 NA A coding 1019 3057 61 3117 PB.5328.1 chr9 + 957 10 full-splice_match OSTF1 ENST00000346234.6 1319 10 -63 425 no_subtype FALSE canonical NA NA 799 None 19 2 0 FALSE 0 0 NA C coding 214 642 214 855 PB.8670.1 chr16 - 1530 7 novel_not_in_catalog LRRC29 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 46 None 2 6 1 FALSE 0 0 NA A coding 159 477 568 1044 PB.3004.1 chr4 - 3203 4 full-splice_match PLA2G12A ENST00000243501.9 5226 4 15 2008 no_subtype FALSE canonical NA NA 461 None 6 25 0 FALSE 0 0 NA A coding 189 567 254 820 PB.4348.1 chr7 + 3441 1 novel_in_catalog PRR15 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA C coding 129 387 2483 2869 PB.4348.2 chr7 + 1605 2 full-splice_match PRR15 ENST00000319694.2 1678 2 64 9 no_subtype FALSE canonical NA NA 503 None 16 4 0 FALSE 0 0 NA C coding 129 387 649 1035 PB.584.1 chr1 - 3307 5 novel_not_in_catalog BCL2L15 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 334 None 2 23 0 TRUE 0 0 NA B coding 163 489 208 696 PB.6976.1 chr12 - 3668 16 novel_not_in_catalog TFCP2 novel NA NA NA NA no_subtype TRUE canonical NA NA 827 None 11 12 1 TRUE 0 0 NA A coding 502 1506 706 2211 PB.5376.1 chr9 - 1242 4 full-splice_match NINJ1 ENST00000375446.4 1281 4 19 20 no_subtype FALSE canonical NA NA 127 None 36 1 0 FALSE 0 0 NA A coding 152 456 53 508 PB.784.2 chr1 - 2789 15 novel_not_in_catalog DCAF8 novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 33 6 0 TRUE 0 0 NA B coding 597 1791 151 1941 PB.8293.7 chr15 + 3446 25 incomplete-splice_match IQGAP1 ENST00000268182.9 7233 38 1324 2463 internal_fragment FALSE canonical NA NA 3428 None 2 0 0 FALSE 0 0 NA C coding 1137 3411 34 3444 PB.8293.1 chr15 + 6304 38 full-splice_match IQGAP1 ENST00000268182.9 7233 38 73 856 no_subtype TRUE canonical NA NA 4911 None 171 9 0 FALSE 0 0 NA C coding 1657 4971 52 5022 PB.8293.3 chr15 + 5889 35 incomplete-splice_match IQGAP1 ENST00000268182.9 7233 38 484 860 internal_fragment FALSE canonical NA NA 4500 None 7 9 0 FALSE 0 0 NA C coding 1535 4605 7 4611 PB.8293.2 chr15 + 2846 24 incomplete-splice_match IQGAP1 ENST00000633485.1 5863 39 60 2957 3prime_fragment FALSE canonical NA NA 2819 None 159 0 0 FALSE 0 0 NA C coding 937 2811 36 2846 PB.2439.1 chr3 + 2943 15 novel_not_in_catalog KALRN novel NA NA NA NA no_subtype FALSE canonical NA NA 1888 None 4 6 0 FALSE 0 0 NA A coding 667 2001 140 2140 PB.7366.1 chr12 + 2951 13 novel_not_in_catalog GLT1D1 novel NA NA NA NA no_subtype TRUE canonical NA NA 940 None 2 18 0 TRUE 0 0 NA A coding 346 1038 59 1096 PB.9307.1 chr17 - 2744 2 novel_not_in_catalog PLEKHM1P1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2068 None 2 16 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.10369.1 chr20 + 1866 17 novel_not_in_catalog CTNNBL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1675 None 40 0 0 TRUE 0 0 NA A coding 563 1689 73 1761 PB.6489.6 chr11 + 2985 19 novel_in_catalog TCIRG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2832 None 16 7 1 FALSE 0 0 NA C coding 614 1842 1067 2908 PB.691.1 chr1 + 4180 22 full-splice_match NPR1 ENST00000368680.3 4236 22 51 5 no_subtype FALSE canonical NA NA 3544 None 4 3 0 FALSE 0 0 NA A coding 1061 3183 422 3604 PB.663.9 chr1 - 1712 8 full-splice_match CTSS ENST00000368985.7 4107 8 204 2191 no_subtype FALSE canonical NA NA 56 None 6 7 0 FALSE 0 0 NA C coding 331 993 58 1050 PB.4784.2 chr8 - 3104 5 novel_not_in_catalog SGK223 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 114 None 3 27 1 TRUE 0 0 NA B coding 721 2163 202 2364 PB.10702.1 chr22 + 2597 2 full-splice_match SLC35E4 ENST00000343605.4 2714 2 114 3 no_subtype FALSE canonical NA NA 1304 None 6 9 0 FALSE 0 0 NA A coding 338 1014 722 1735 PB.6489.8 chr11 + 3585 17 novel_in_catalog TCIRG1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3432 None 2 6 1 FALSE 0 0 NA C coding 459 1377 1067 2443 PB.2367.1 chr3 + 3921 1 genic_intron novelGene_995 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1854.7 chr2 + 1452 1 novel_in_catalog ARPC2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.162.1 chr1 + 3933 14 full-splice_match CEP85 ENST00000252992.8 3935 14 -2 4 no_subtype FALSE canonical NA NA 2261 None 8 10 0 FALSE 0 0 NA A coding 760 2280 140 2419 PB.3735.1 chr6 + 919 6 novel_not_in_catalog TMEM14B novel NA NA NA NA no_subtype TRUE canonical NA NA 412 None 3 7 0 TRUE 0 0 NA A coding 114 342 120 461 PB.4340.1 chr7 - 2490 1 full-splice_match EIF4HP1 ENST00000453115.1 687 1 -21 -1782 no_subtype FALSE canonical NA NA NA None 117 13 0 FALSE 0 0 NA A coding 228 684 22 705 PB.4616.2 chr7 - 1465 2 novel_in_catalog BMT2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 288 None 3 8 0 FALSE 0 0 NA C coding 101 303 129 431 PB.5923.1 chr10 - 2740 1 genic_intron novelGene_853 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4723.1 chr7 + 2010 4 full-splice_match TMEM139 ENST00000409244.5 1257 4 -4 -749 no_subtype FALSE canonical NA NA 388 None 2 5 0 FALSE 0 0 NA A coding 216 648 144 791 PB.2873.5 chr4 - 1660 1 novel_in_catalog ANKRD17 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2873.4 chr4 - 4081 24 novel_in_catalog ANKRD17 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 69 None 2 7 0 FALSE 0 0 NA B coding 1355 4065 16 4080 PB.2873.3 chr4 - 3811 24 incomplete-splice_match ANKRD17 ENST00000330838.10 7734 33 3 3920 internal_fragment FALSE canonical NA NA 520 None 3 10 0 FALSE 0 0 NA B coding 1228 3684 128 3811 PB.2873.2 chr4 - 3709 22 incomplete-splice_match ANKRD17 ENST00000509867.6 8105 34 476 3920 internal_fragment FALSE canonical NA NA 124 None 2 0 0 FALSE 0 0 NA B coding 1191 3573 137 3709 PB.663.8 chr1 - 1848 10 novel_not_in_catalog CTSS novel NA NA NA NA no_subtype FALSE canonical NA NA 99 None 3 7 1 TRUE 0 0 NA C coding 318 954 101 1054 PB.1218.1 chr2 + 3750 15 novel_not_in_catalog NCOA1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3457 None 2 4 2 TRUE 0 0 NA B coding 1145 3435 66 3500 PB.5464.1 chr9 - 6630 2 intergenic novelGene_1018 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3407 None 3 51 1 FALSE 0 0 NA A coding 112 336 4253 4588 PB.10396.1 chr20 + 1776 1 genic_intron novelGene_438 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 6 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.10375.1 chr20 - 1530 1 antisense novelGene_RALGAPB_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6032.2 chr10 + 1527 1 incomplete-splice_match CASP7 ENST00000452490.3 2271 6 739 6 no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7033.11 chr12 - 3768 29 novel_in_catalog SMARCC2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 173 None 2 5 2 FALSE 0 0 NA C coding 1121 3363 63 3425 PB.9332.1 chr17 + 1550 12 novel_in_catalog MAP2K6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1028 None 2 0 0 FALSE 0 0 NA A coding 278 834 270 1103 PB.809.1 chr1 + 1244 7 novel_not_in_catalog SDHC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 887 None 22 6 1 TRUE 0 0 NA A coding 169 507 6 512 PB.4360.1 chr7 + 2566 3 genic_intron novelGene_326 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1608 None 2 19 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.285.1 chr1 - 2729 16 full-splice_match PABPC4 ENST00000372857.7 3048 16 307 12 no_subtype FALSE canonical NA NA 679 None 2 7 0 FALSE 0 0 NA A coding 644 1932 487 2418 PB.4152.3 chr6 - 1634 4 novel_in_catalog IFNGR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 115 None 2 6 0 FALSE 0 0 NA C coding 189 567 31 597 PB.6491.1 chr11 - 1767 6 novel_not_in_catalog C11orf24 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 117 None 14 7 2 TRUE 0 0 NA A coding 174 522 1104 1625 PB.1218.2 chr2 + 3664 14 incomplete-splice_match NCOA1 ENST00000348332.7 6895 21 1044 2187 internal_fragment FALSE canonical NA NA 3369 None 2 2 1 FALSE 0 0 NA B coding 1179 3537 1 3537 PB.4199.5 chr6 - 3987 19 novel_in_catalog SYNE1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 157 None 2 3 0 FALSE 0 0 NA B coding 999 2997 251 3247 PB.3509.2 chr5 + 2546 8 novel_not_in_catalog CTNNA1 novel NA NA NA NA no_subtype TRUE canonical NA NA 946 None 2 14 0 TRUE 0 0 NA B coding 361 1083 89 1171 PB.7818.1 chr14 + 1524 8 full-splice_match EIF2B2 ENST00000266126.9 4314 8 12 2778 no_subtype FALSE canonical NA NA 966 None 17 4 0 FALSE 0 0 NA A coding 351 1053 69 1121 PB.3509.1 chr5 + 3742 19 novel_not_in_catalog CTNNA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2515 None 173 13 0 TRUE 0 0 NA B coding 906 2718 83 2800 PB.3509.4 chr5 + 3001 6 novel_not_in_catalog CTNNA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1397 None 4 33 1 TRUE 0 0 NA B coding 172 516 1107 1622 PB.3509.5 chr5 + 3076 13 novel_in_catalog CTNNA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1847 None 5 13 0 FALSE 0 0 NA B coding 700 2100 33 2132 PB.7677.2 chr14 + 3723 10 novel_not_in_catalog FAM179B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3680 None 11 1 0 FALSE 0 0 NA B coding 1185 3555 168 3722 PB.7677.3 chr14 + 6408 22 novel_not_in_catalog FAM179B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5276 None 6 6 0 TRUE 0 0 NA B coding 1735 5205 335 5539 PB.3962.1 chr6 - 2108 8 full-splice_match CRISP3 ENST00000263045.8 2170 8 27 35 no_subtype FALSE canonical NA NA 57 None 2 3 0 FALSE 0 0 NA A coding 258 774 21 794 PB.7677.1 chr14 + 2712 1 novel_in_catalog FAM179B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 8 6 0 FALSE 0 0 NA B coding 652 1956 307 2262 PB.10463.4 chr20 + 2148 1 novel_in_catalog VAPB novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.5473.6 chr9 - 3113 7 novel_not_in_catalog MEGF9 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 76 None 2 11 0 TRUE 0 0 NA B coding 74 222 1566 1787 PB.7371.2 chr12 + 2591 8 novel_not_in_catalog EP400 novel NA NA NA NA no_subtype FALSE canonical NA NA 2563 None 4 1 1 FALSE 0 0 NA A coding 823 2469 121 2589 PB.946.27 chr1 + 2802 28 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2761 None 4 12 2 TRUE 0 0 NA B coding 849 2547 254 2800 PB.2611.1 chr3 + 2049 16 full-splice_match FXR1 ENST00000445140.6 2651 16 -10 612 no_subtype FALSE canonical NA NA 1627 None 3 1 0 FALSE 0 0 NA C coding 539 1617 25 1641 PB.5626.2 chr9 + 1527 10 novel_in_catalog EGFL7 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1124 None 17 7 0 FALSE 0 0 NA C coding 273 819 326 1144 PB.793.2 chr1 - 2913 7 full-splice_match CD84 ENST00000368054.7 8181 7 5 5263 no_subtype FALSE canonical NA NA 77 None 26 10 0 FALSE 0 0 NA C coding 328 984 32 1015 PB.6960.1 chr12 - 1619 3 novel_not_in_catalog BCDIN3D novel NA NA NA NA no_subtype FALSE non_canonical NA NA 252 None 6 3 0 TRUE 0 0 NA A coding 292 876 19 894 PB.9652.1 chr19 + 5703 11 incomplete-splice_match DOT1L ENST00000398665.7 7436 28 1729 4 internal_fragment TRUE canonical NA NA 2913 None 2 29 0 FALSE 0 0 NA A coding 831 2493 426 2918 PB.10522.1 chr21 - 1713 1 full-splice_match CLDN8 ENST00000399899.1 2068 1 30 325 no_subtype FALSE canonical NA NA NA None 16 3 0 FALSE 0 0 NA C coding 225 675 119 793 PB.57.1 chr1 + 1466 9 novel_not_in_catalog FBXO6 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1402 None 2 8 1 TRUE 0 0 NA A coding 293 879 165 1043 PB.3426.3 chr5 - 3329 3 full-splice_match TMED7 ENST00000456936.3 3757 3 326 102 no_subtype FALSE canonical NA NA 247 None 19 13 0 FALSE 0 0 NA A coding 224 672 56 727 PB.6923.1 chr12 - 1746 1 genic_intron novelGene_468 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.57.2 chr1 + 1127 5 full-splice_match AGTRAP ENST00000314340.9 1107 5 -22 2 no_subtype FALSE canonical NA NA 440 None 2 5 0 FALSE 0 0 NA A coding 159 477 77 553 PB.7164.1 chr12 - 5729 2 novel_not_in_catalog RP11-74K11.2 novel NA NA NA NA no_subtype FALSE canonical NA NA 222 None 2 26 1 TRUE 0 0 NA A coding 131 393 4819 5211 PB.1877.1 chr2 - 1706 15 full-splice_match DNPEP ENST00000373966.5 1875 15 168 1 no_subtype FALSE canonical NA NA 189 None 2 1 0 FALSE 0 0 NA C coding 471 1413 196 1608 PB.7164.3 chr12 - 2799 2 antisense novelGene_PLXNC1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 1223 None 13 8 1 FALSE 0 0 NA A coding 108 324 185 508 PB.2611.2 chr3 + 2211 16 novel_in_catalog FXR1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1790 None 2 3 0 FALSE 0 0 NA C coding 650 1950 9 1958 PB.793.7 chr1 - 3605 6 novel_in_catalog CD84 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 86 None 2 10 0 FALSE 0 0 NA C coding 280 840 41 880 PB.7351.1 chr12 - 4256 2 genic RP11-197N18.8 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2384 None 2 27 1 FALSE 0 0 NA A coding 155 465 6 470 PB.3875.6 chr6 - 3611 14 novel_not_in_catalog SRPK1 novel NA NA NA NA no_subtype TRUE canonical NA NA 52 None 3 10 0 TRUE 0 0 NA B coding 344 1032 40 1071 PB.3875.4 chr6 - 3032 17 novel_not_in_catalog SRPK1 novel NA NA NA NA no_subtype TRUE canonical NA NA 52 None 5 11 1 TRUE 0 0 NA B coding 623 1869 40 1908 PB.3875.5 chr6 - 3437 16 novel_not_in_catalog SRPK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 78 None 2 11 1 TRUE 0 0 NA B coding 344 1032 66 1097 PB.3875.2 chr6 - 4199 17 novel_not_in_catalog SRPK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 41 None 26 18 0 TRUE 0 0 NA B coding 655 1965 29 1993 PB.3875.3 chr6 - 2797 7 novel_not_in_catalog SRPK1 novel NA NA NA NA no_subtype FALSE canonical NA NA 45 None 2 17 0 TRUE 0 0 NA B coding 116 348 252 599 PB.7896.1 chr14 + 3873 2 full-splice_match C14orf132 ENST00000555004.2 7583 2 47 3663 no_subtype FALSE canonical NA NA 157 None 11 23 0 FALSE 0 0 NA A coding 83 249 131 379 PB.399.2 chr1 + 3244 1 incomplete-splice_match HOOK1 ENST00000371208.3 5857 22 2602 12 no_subtype FALSE canonical NA NA NA None 4 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7667.1 chr14 - 3122 9 incomplete-splice_match RALGAPA1 ENST00000307138.10 7911 40 4784 5 5prime_fragment FALSE canonical NA NA 162 None 2 8 0 FALSE 0 0 NA A coding 633 1899 36 1934 PB.2863.1 chr4 + 1257 2 antisense novelGene_JCHAIN_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 21 None 2 13 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.3729.4 chr6 + 3831 1 incomplete-splice_match DSP ENST00000418664.2 7812 24 3979 3 no_subtype FALSE canonical NA NA NA None 5 6 0 FALSE 0 0 NA C coding 894 2682 455 3136 PB.3729.2 chr6 + 3545 23 incomplete-splice_match DSP ENST00000418664.2 7812 24 59 4208 3prime_fragment FALSE canonical NA NA 3324 None 10 1 0 FALSE 0 0 NA C coding 1101 3303 241 3543 PB.3729.3 chr6 + 4036 2 incomplete-splice_match DSP ENST00000379802.7 9796 24 5613 147 internal_fragment FALSE canonical NA NA 107 None 2 8 0 FALSE 0 0 NA C coding 894 2682 660 3341 PB.3729.1 chr6 + 4159 24 full-splice_match DSP ENST00000418664.2 7812 24 -10 3663 no_subtype FALSE canonical NA NA 3891 None 11 3 0 FALSE 0 0 NA C coding 1283 3849 310 4158 PB.7872.1 chr14 - 1882 15 novel_not_in_catalog LGMN novel NA NA NA NA no_subtype TRUE canonical NA NA 51 None 2 5 0 TRUE 0 0 NA B coding 433 1299 81 1379 PB.9124.2 chr17 - 4286 30 novel_not_in_catalog ACLY novel NA NA NA NA no_subtype FALSE canonical NA NA 74 None 52 6 1 TRUE 0 0 NA B coding 1101 3303 102 3404 PB.9124.7 chr17 - 4052 29 novel_not_in_catalog ACLY novel NA NA NA NA no_subtype TRUE canonical NA NA 64 None 7 6 0 TRUE 0 0 NA B coding 1091 3273 88 3360 PB.11199.10 chrX - 3020 21 novel_in_catalog ARHGAP4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 131 None 2 3 0 FALSE 0 0 NA C coding 868 2604 65 2668 PB.5976.1 chr10 + 3619 5 full-splice_match C10orf2 ENST00000311916.6 3131 5 -490 2 no_subtype FALSE canonical NA NA 2409 None 10 7 0 FALSE 0 0 NA A coding 663 1989 739 2727 PB.2756.6 chr4 + 3076 3 novel_not_in_catalog CD38 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2875 None 2 16 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.2756.4 chr4 + 1471 1 novel_in_catalog CD38 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA C coding 82 246 87 332 PB.231.8 chr1 - 2872 1 novel_in_catalog BSDC1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 18 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2756.2 chr4 + 2678 8 full-splice_match CD38 ENST00000226279.7 5668 8 58 2932 no_subtype FALSE canonical NA NA 918 None 45 11 0 FALSE 0 0 NA C coding 300 900 80 979 PB.2024.1 chr3 + 2452 1 incomplete-splice_match NR2C2 ENST00000617312.4 8113 14 5656 6 no_subtype FALSE canonical NA NA NA None 7 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10303.1 chr20 - 5637 2 antisense novelGene_CST7_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 5558 None 2 38 0 FALSE 0 0 NA A coding 115 345 2353 2697 PB.445.1 chr1 + 5670 7 novel_in_catalog IFI44 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5371 None 7 25 1 FALSE 0 0 NA C coding 237 711 132 842 PB.3920.1 chr6 + 3338 1 genic_intron novelGene_422 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA A coding 64 192 276 467 PB.231.2 chr1 - 2686 11 full-splice_match BSDC1 ENST00000455895.6 2846 11 17 143 no_subtype FALSE canonical NA NA 28 None 112 9 0 FALSE 0 0 NA C coding 430 1290 18 1307 PB.231.3 chr1 - 2789 11 full-splice_match BSDC1 ENST00000446293.6 1505 11 -1 -1283 no_subtype FALSE canonical NA NA 28 None 8 12 0 FALSE 0 0 NA C coding 447 1341 18 1358 PB.2840.1 chr4 + 4218 11 full-splice_match DCUN1D4 ENST00000334635.9 4312 11 90 4 no_subtype FALSE canonical NA NA 913 None 3 22 0 FALSE 0 0 NA A coding 292 876 91 966 PB.6505.2 chr11 + 1876 6 full-splice_match RNF121 ENST00000528683.5 721 6 -13 -1142 no_subtype FALSE canonical NA NA 534 None 3 12 0 FALSE 0 0 NA A coding 220 660 29 688 PB.5677.1 chr10 + 4212 1 intergenic novelGene_91 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 23 0 FALSE 0 0 NA A coding 111 333 1775 2107 PB.3368.2 chr5 - 1663 12 novel_in_catalog TMEM161B novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 143 None 3 1 0 FALSE 0 0 NA B coding 305 915 649 1563 PB.4080.2 chr6 + 3019 23 full-splice_match FIG4 ENST00000230124.7 3011 23 -14 6 no_subtype FALSE canonical NA NA 2684 None 4 6 0 FALSE 0 0 NA C coding 907 2721 139 2859 PB.2497.1 chr3 - 1767 5 novel_in_catalog NMNAT3 novel NA NA NA NA no_combination_of_known_junctions TRUE canonical NA NA 154 None 2 7 1 FALSE 0 0 NA A coding 252 756 192 947 PB.7359.1 chr12 + 3004 22 novel_not_in_catalog ATP6V0A2 novel NA NA NA NA no_subtype FALSE canonical NA NA 2660 None 2 3 1 TRUE 0 0 NA A coding 856 2568 196 2763 PB.6505.4 chr11 + 1327 6 full-splice_match IL18BP ENST00000260049.9 1354 6 25 2 no_subtype FALSE canonical NA NA 586 None 2 8 0 FALSE 0 0 NA C coding 194 582 80 661 PB.211.6 chr1 - 3878 7 novel_in_catalog LAPTM5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 116 None 2 17 0 FALSE 0 0 NA C coding 189 567 1951 2517 PB.8578.2 chr16 + 4212 31 novel_not_in_catalog ITGAX novel NA NA NA NA no_subtype FALSE canonical NA NA 3563 None 3 5 0 FALSE 0 0 NA C coding 1166 3498 83 3580 PB.8578.1 chr16 + 4223 31 novel_not_in_catalog ITGAX novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3565 None 2 7 1 TRUE 0 0 NA C coding 1171 3513 90 3602 PB.47.1 chr1 - 1086 2 antisense novelGene_PIK3CD_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 742 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.211.2 chr1 - 1210 8 full-splice_match LAPTM5 ENST00000294507.3 2223 8 46 967 no_subtype FALSE canonical NA NA 116 None 241 1 0 FALSE 0 0 NA C coding 262 786 30 815 PB.2587.1 chr3 - 1529 1 genic_intron novelGene_1313 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2448.3 chr3 - 1780 11 novel_in_catalog TPRA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 196 None 2 3 0 FALSE 0 0 NA C coding 373 1119 214 1332 PB.1914.1 chr2 + 2688 22 novel_in_catalog PSMD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2600 None 55 0 0 FALSE 0 0 NA C coding 856 2568 120 2687 PB.5221.1 chr9 - 3270 2 genic_intron novelGene_47 novel NA NA NA NA no_subtype FALSE canonical NA NA 392 None 2 20 1 FALSE 0 0 NA A coding 109 327 2171 2497 PB.211.9 chr1 - 2080 7 novel_not_in_catalog LAPTM5 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 88 None 4 8 0 TRUE 0 0 NA C coding 215 645 76 720 PB.7402.1 chr13 + 2669 3 antisense novelGene_RP11-545M8.4_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 449 None 2 15 1 FALSE 0 0 NA A coding 129 387 952 1338 PB.451.2 chr1 + 1246 9 full-splice_match RPF1 ENST00000370654.5 1385 9 12 127 no_subtype FALSE canonical NA NA 1011 None 11 2 0 FALSE 0 0 NA C coding 349 1047 4 1050 PB.4044.4 chr6 - 1505 11 incomplete-splice_match PNISR ENST00000369239.9 5112 12 20 3587 internal_fragment FALSE canonical NA NA 74 None 3 0 0 FALSE 0 0 NA C coding 440 1320 186 1505 PB.4667.1 chr7 - 2909 3 genic_intron novelGene_1127 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 378 None 3 23 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.7156.2 chr12 - 3066 21 incomplete-splice_match EEA1 ENST00000322349.12 9875 29 38 6771 internal_fragment FALSE canonical NA NA 251 None 4 1 0 FALSE 0 0 NA B coding 946 2838 228 3065 PB.7156.3 chr12 - 2633 19 incomplete-splice_match EEA1 ENST00000322349.12 9875 29 38 7204 internal_fragment FALSE canonical NA NA 251 None 4 0 0 FALSE 0 0 NA B coding 802 2406 228 2633 PB.6934.1 chr12 + 2803 23 full-splice_match PFKM ENST00000359794.9 3228 23 123 302 no_subtype FALSE canonical NA NA 2264 None 31 1 0 FALSE 0 0 NA A coding 780 2340 67 2406 PB.7284.1 chr12 - 2931 9 full-splice_match TBX5 ENST00000405440.6 2203 9 52 -780 no_subtype FALSE canonical NA NA 405 None 2 6 0 FALSE 0 0 NA A coding 518 1554 444 1997 PB.9271.2 chr17 + 3794 14 novel_in_catalog CLTC novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2355 None 2 10 0 FALSE 0 0 NA C coding 769 2307 228 2534 PB.6346.5 chr11 + 2946 13 novel_not_in_catalog STX3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1022 None 6 10 1 TRUE 0 0 NA B coding 338 1014 158 1171 PB.6346.6 chr11 + 2847 12 novel_not_in_catalog STX3 novel NA NA NA NA no_subtype FALSE canonical NA NA 901 None 4 21 0 TRUE 0 0 NA B coding 289 867 116 982 PB.9271.1 chr17 + 5979 32 full-splice_match CLTC ENST00000269122.7 7760 32 231 1550 no_subtype FALSE canonical NA NA 4946 None 168 3 0 FALSE 0 0 NA C coding 1675 5025 44 5068 PB.6346.1 chr11 + 2909 13 novel_not_in_catalog STX3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1061 None 18 11 1 TRUE 0 0 NA B coding 290 870 197 1066 PB.6346.2 chr11 + 2943 15 novel_not_in_catalog STX3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1096 None 2 15 3 TRUE 0 0 NA B coding 289 867 224 1090 PB.6346.3 chr11 + 2934 13 novel_not_in_catalog STX3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1087 None 4 12 1 TRUE 0 0 NA B coding 290 870 223 1092 PB.9287.5 chr17 + 2868 1 incomplete-splice_match DCAF7 ENST00000614556.4 6340 7 3470 3 no_subtype FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA C coding 107 321 1379 1699 PB.9271.8 chr17 + 3601 18 incomplete-splice_match CLTC ENST00000269122.7 7760 32 2609 1550 internal_fragment FALSE canonical NA NA 2568 None 12 3 0 FALSE 0 0 NA C coding 680 2040 651 2690 PB.6596.2 chr11 - 3949 1 antisense novelGene_ENDOD1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 12 15 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6346.8 chr11 + 5527 1 novel_in_catalog STX3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 43 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1309.3 chr2 - 2597 14 full-splice_match PREPL ENST00000409411.5 4725 14 54 2074 no_subtype FALSE canonical NA NA 113 None 2 6 0 FALSE 0 0 NA A coding 638 1914 162 2075 PB.9287.3 chr17 + 2441 7 full-splice_match DCAF7 ENST00000614556.4 6340 7 26 3873 no_subtype FALSE canonical NA NA 1047 None 2 8 0 FALSE 0 0 NA C coding 342 1026 192 1217 PB.9287.2 chr17 + 1361 8 full-splice_match DCAF7 ENST00000431926.5 1354 8 -15 8 no_subtype FALSE canonical NA NA 1305 None 2 1 0 FALSE 0 0 NA C coding 342 1026 212 1237 PB.9136.10 chr17 - 2651 25 novel_not_in_catalog STAT3 novel NA NA NA NA no_subtype FALSE canonical NA NA 161 None 83 2 1 TRUE 0 0 NA B coding 543 1629 851 2479 PB.1274.2 chr2 + 1453 7 novel_not_in_catalog GPATCH11 novel NA NA NA NA no_subtype FALSE canonical NA NA 596 None 3 8 2 FALSE 0 0 NA B coding 226 678 57 734 PB.1274.1 chr2 + 2945 9 novel_not_in_catalog GPATCH11 novel NA NA NA NA no_subtype FALSE canonical NA NA 832 None 2 15 0 FALSE 0 0 NA B coding 259 777 109 885 PB.9136.13 chr17 - 2644 25 novel_not_in_catalog STAT3 novel NA NA NA NA no_subtype FALSE canonical NA NA 194 None 7 5 2 TRUE 0 0 NA B coding 494 1482 884 2365 PB.9136.14 chr17 - 3344 25 novel_not_in_catalog STAT3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 175 None 19 7 2 TRUE 0 0 NA B coding 543 1629 869 2497 PB.4418.1 chr7 + 3297 10 novel_not_in_catalog IKZF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 659 None 9 6 0 TRUE 0 0 NA B coding 432 1296 71 1366 PB.9136.16 chr17 - 3316 25 novel_not_in_catalog STAT3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 140 None 6 7 2 TRUE 0 0 NA B coding 543 1629 841 2469 PB.4418.3 chr7 + 3945 10 novel_not_in_catalog IKZF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1307 None 2 7 0 TRUE 0 0 NA B coding 519 1557 458 2014 PB.8983.1 chr17 - 1567 10 novel_in_catalog LGALS9B novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 94 None 12 7 1 FALSE 0 0 NA A coding 323 969 56 1024 PB.1329.1 chr2 + 1418 6 novel_not_in_catalog FOXN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 905 None 7 1 1 FALSE 0 0 NA A coding 428 1284 134 1417 PB.9396.8 chr17 + 2666 6 novel_not_in_catalog SEC14L1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2016 None 2 18 2 TRUE 0 0 NA C coding 109 327 21 347 PB.11196.1 chrX + 3658 10 full-splice_match ABCD1 ENST00000218104.5 3664 10 -12 18 no_subtype FALSE canonical NA NA 2402 None 33 6 0 FALSE 0 0 NA A coding 745 2235 412 2646 PB.4418.8 chr7 + 3662 8 novel_not_in_catalog IKZF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1024 None 9 7 2 FALSE 0 0 NA B coding 446 1338 394 1731 PB.5831.9 chr10 - 2045 9 novel_not_in_catalog C10orf54 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 169 None 3 7 1 TRUE 0 0 NA C coding 179 537 609 1145 PB.219.1 chr1 - 1603 5 full-splice_match PEF1 ENST00000373703.4 1629 5 9 17 no_subtype FALSE canonical NA NA 38 None 70 4 0 FALSE 0 0 NA A coding 284 852 15 866 PB.1201.1 chr2 + 3497 2 genic_intron novelGene_167 novel NA NA NA NA no_subtype FALSE canonical NA NA 1448 None 2 27 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10286.2 chr20 - 2074 5 full-splice_match RBBP9 ENST00000337227.8 3861 5 39 1748 no_subtype FALSE canonical NA NA 136 None 2 9 0 FALSE 0 0 NA A coding 186 558 38 595 PB.5549.1 chr9 - 1130 5 full-splice_match ZDHHC12 ENST00000372663.8 1129 5 -15 14 no_subtype FALSE canonical NA NA 128 None 4 6 0 FALSE 0 0 NA A coding 267 801 29 829 PB.9559.1 chr18 - 1450 3 full-splice_match IER3IP1 ENST00000256433.4 3525 3 24 2051 no_subtype FALSE canonical NA NA 164 None 16 7 0 FALSE 0 0 NA C coding 82 246 74 319 PB.8370.1 chr16 - 993 3 full-splice_match MRPS34 ENST00000397375.6 1024 3 21 10 no_subtype FALSE canonical NA NA 336 None 4 2 0 FALSE 0 0 NA A coding 218 654 16 669 PB.7929.6 chr14 + 5661 36 novel_in_catalog DYNC1H1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5307 None 2 1 0 FALSE 0 0 NA B coding 1780 5340 94 5433 PB.11031.1 chrX - 3138 18 novel_in_catalog PHKA1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 457 None 2 5 0 FALSE 0 0 NA A coding 658 1974 380 2353 PB.10805.1 chr22 - 1892 9 full-splice_match CYB5R3 ENST00000352397.9 2124 9 192 40 no_subtype FALSE canonical NA NA 82 None 92 4 0 FALSE 0 0 NA C coding 301 903 62 964 PB.10805.2 chr22 - 1879 9 full-splice_match CYB5R3 ENST00000407623.7 2153 9 298 -24 no_subtype FALSE canonical NA NA 39 None 2 2 0 FALSE 0 0 NA C coding 291 873 49 921 PB.205.1 chr1 - 1101 6 full-splice_match TAF12 ENST00000373824.8 1334 6 -17 250 no_subtype FALSE canonical NA NA 92 None 3 2 0 FALSE 0 0 NA A coding 161 483 177 659 PB.3323.1 chr5 + 1562 6 novel_not_in_catalog FCHO2 novel NA NA NA NA no_subtype TRUE canonical NA NA 606 None 2 6 0 FALSE 0 0 NA A coding 111 333 832 1164 PB.4715.1 chr7 + 5996 6 novel_not_in_catalog NDUFB2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5925 None 2 41 2 TRUE 0 0 NA A non_coding NA NA NA NA PB.10028.1 chr19 + 2415 2 antisense novelGene_LIPE_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2313 None 2 12 1 FALSE 0 0 NA A coding 116 348 627 974 PB.4928.1 chr8 + 2728 1 genic_intron novelGene_541 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 22 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1906.5 chr2 - 1187 10 novel_not_in_catalog SP110 novel NA NA NA NA no_subtype FALSE canonical NA NA 116 None 2 1 0 FALSE 0 0 NA B coding 356 1068 118 1185 PB.3637.1 chr5 - 3779 3 genic_intron novelGene_1298 novel NA NA NA NA no_subtype TRUE canonical NA NA 163 None 3 14 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.3671.1 chr5 - 1593 9 novel_not_in_catalog LMAN2 novel NA NA NA NA no_subtype FALSE canonical NA NA 203 None 133 7 0 TRUE 0 0 NA A coding 285 855 221 1075 PB.2074.1 chr3 + 3581 14 incomplete-splice_match STT3B ENST00000295770.3 4248 16 661 6 internal_fragment FALSE canonical NA NA 1948 None 2 7 0 FALSE 0 0 NA C coding 577 1731 296 2026 PB.5209.1 chr9 + 3430 7 full-splice_match CDC37L1 ENST00000381854.3 3502 7 65 7 no_subtype FALSE canonical NA NA 1049 None 14 13 0 FALSE 0 0 NA A coding 337 1011 138 1148 PB.7554.3 chr13 - 2831 1 novel_in_catalog GPR183 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 14 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7909.2 chr14 - 5248 1 genic_intron novelGene_904 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 12 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4410.8 chr7 + 1611 9 novel_in_catalog CCM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 937 None 6 3 0 FALSE 0 0 NA C coding 380 1140 76 1215 PB.4410.9 chr7 + 2584 3 novel_in_catalog CCM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 182 None 3 10 0 FALSE 0 0 NA C coding 132 396 6 401 PB.3416.1 chr5 - 2695 1 genic_intron novelGene_1003 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 23 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7079.1 chr12 + 3853 25 full-splice_match XPOT ENST00000332707.9 6414 25 111 2450 no_subtype FALSE canonical NA NA 3280 None 2 5 0 FALSE 0 0 NA A coding 962 2886 419 3304 PB.4410.4 chr7 + 3088 3 novel_not_in_catalog CCM2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 141 None 4 8 0 TRUE 0 0 NA C coding 105 315 591 905 PB.4410.5 chr7 + 1789 10 full-splice_match CCM2 ENST00000381112.7 1881 10 66 26 no_subtype FALSE canonical NA NA 1122 None 30 3 0 FALSE 0 0 NA C coding 465 1395 6 1400 PB.4410.6 chr7 + 2756 4 novel_in_catalog CCM2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 354 None 8 11 0 FALSE 0 0 NA C coding 190 570 4 573 PB.6878.3 chr12 - 3080 3 genic_intron novelGene_265 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2789 None 2 25 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.4410.1 chr7 + 5651 9 antisense novelGene_PURB_AS novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5258 None 4 34 3 FALSE 0 0 NA B non_coding NA NA NA NA PB.4410.2 chr7 + 1508 1 antisense novelGene_PURB_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4410.3 chr7 + 1800 10 full-splice_match CCM2 ENST00000258781.10 1894 10 77 17 no_subtype FALSE canonical NA NA 1126 None 9 2 0 FALSE 0 0 NA C coding 444 1332 73 1404 PB.3652.1 chr5 - 1971 4 full-splice_match STC2 ENST00000265087.8 5353 4 1023 2359 no_subtype FALSE canonical NA NA 438 None 2 3 0 FALSE 0 0 NA A coding 302 906 288 1193 PB.11005.5 chrX + 3375 10 incomplete-splice_match MSN ENST00000360270.6 3944 13 572 -3 internal_fragment FALSE canonical NA NA 1169 None 20 7 0 FALSE 0 0 NA B coding 396 1188 144 1331 PB.11005.4 chrX + 3665 11 incomplete-splice_match MSN ENST00000360270.6 3944 13 280 -1 internal_fragment FALSE canonical NA NA 1461 None 8 7 0 FALSE 0 0 NA B coding 396 1188 436 1623 PB.3478.5 chr5 + 576 1 genic_intron novelGene_1155 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 13 3 0 FALSE 0 0 NA A coding 121 363 137 499 PB.8366.1 chr16 + 1428 1 novel_in_catalog TMEM204 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 3 5 0 FALSE 0 0 NA C coding 157 471 605 1075 PB.8366.2 chr16 + 1822 3 full-splice_match TMEM204 ENST00000566264.1 1938 3 110 6 no_subtype FALSE canonical NA NA 1029 None 13 9 0 FALSE 0 0 NA C coding 226 678 594 1271 PB.8366.3 chr16 + 1663 2 novel_in_catalog TMEM204 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 884 None 3 6 0 FALSE 0 0 NA C coding 174 522 605 1126 PB.2914.3 chr4 - 4078 25 full-splice_match SEC31A ENST00000348405.8 4012 25 -69 3 no_subtype FALSE canonical NA NA 118 None 7 5 0 FALSE 0 0 NA C coding 1181 3543 123 3665 PB.2914.2 chr4 - 4149 27 full-splice_match SEC31A ENST00000395310.6 4259 27 107 3 no_subtype FALSE canonical NA NA 72 None 12 6 0 FALSE 0 0 NA C coding 1220 3660 77 3736 PB.8117.4 chr15 + 1898 9 full-splice_match FAM63B ENST00000450403.3 4820 9 -56 2978 no_subtype FALSE canonical NA NA 1827 None 16 1 0 FALSE 0 0 NA C coding 602 1806 91 1896 PB.9807.4 chr19 + 1380 10 novel_not_in_catalog RAD23A novel NA NA NA NA no_subtype FALSE canonical NA NA 1156 None 2 1 0 FALSE 0 0 NA C coding 397 1191 77 1267 PB.8117.2 chr15 + 3215 6 novel_not_in_catalog FAM63B novel NA NA NA NA no_subtype FALSE canonical NA NA 2116 None 4 7 1 TRUE 0 0 NA C coding 379 1137 95 1231 PB.9807.2 chr19 + 1752 9 full-splice_match RAD23A ENST00000586534.5 1746 9 -14 8 no_subtype FALSE canonical NA NA 1053 None 27 9 0 FALSE 0 0 NA C coding 363 1089 76 1164 PB.9551.1 chr18 + 1764 1 incomplete-splice_match SETBP1 ENST00000282030.5 9899 6 8058 78 no_subtype FALSE canonical NA NA NA None 2 4 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.8117.1 chr15 + 1992 1 novel_in_catalog FAM63B novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 6 0 FALSE 0 0 NA C coding 298 894 109 1002 PB.8804.2 chr16 + 1797 14 novel_in_catalog CTU2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1603 None 2 5 0 FALSE 0 0 NA C coding 408 1224 26 1249 PB.7533.1 chr13 - 3501 6 full-splice_match RNF219 ENST00000282003.6 3529 6 27 1 no_subtype FALSE canonical NA NA 104 None 26 10 0 FALSE 0 0 NA A coding 726 2178 33 2210 PB.1882.1 chr2 + 2940 11 novel_not_in_catalog STK11IP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2534 None 4 11 0 TRUE 0 0 NA B coding 407 1221 1461 2681 PB.3348.4 chr5 - 2079 1 novel_in_catalog SERINC5 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA B coding 119 357 125 481 PB.25.2 chr1 + 3843 17 novel_not_in_catalog KCNAB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3609 None 6 28 2 TRUE 0 0 NA B coding 367 1101 150 1250 PB.25.3 chr1 + 3862 17 novel_not_in_catalog KCNAB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3625 None 27 29 2 TRUE 0 0 NA B coding 367 1101 166 1266 PB.25.1 chr1 + 3762 16 novel_not_in_catalog KCNAB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3525 None 15 27 1 TRUE 0 0 NA B coding 353 1059 108 1166 PB.25.6 chr1 + 5971 15 novel_not_in_catalog KCNAB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5737 None 2 39 2 TRUE 0 0 NA B coding 300 900 2479 3378 PB.25.7 chr1 + 5817 12 novel_not_in_catalog KCNAB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5579 None 2 44 1 TRUE 0 0 NA B coding 366 1098 2123 3220 PB.25.4 chr1 + 3784 16 novel_not_in_catalog KCNAB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3543 None 45 31 1 TRUE 0 0 NA B coding 353 1059 126 1184 PB.1202.3 chr2 - 2649 21 incomplete-splice_match SMC6 ENST00000351948.8 5173 27 -3 2527 internal_fragment FALSE canonical NA NA 208 None 17 2 1 FALSE 0 0 NA B coding 812 2436 214 2649 PB.4426.2 chr7 + 2973 4 antisense novelGene_RP11-1217F2.1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2630 None 6 14 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.4426.1 chr7 + 3049 3 antisense novelGene_RP11-1217F2.1_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2706 None 8 13 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.6008.2 chr10 + 6128 34 novel_not_in_catalog PDCD11 novel NA NA NA NA no_subtype FALSE canonical NA NA 5215 None 2 8 1 TRUE 0 0 NA B coding 1789 5367 18 5384 PB.6045.1 chr10 - 3536 5 full-splice_match PDZD8 ENST00000334464.6 9699 5 41 6122 no_subtype FALSE canonical NA NA 1071 None 2 7 0 FALSE 0 0 NA C coding 1112 3336 200 3535 PB.8570.2 chr16 + 6171 3 full-splice_match ZNF646 ENST00000300850.5 6892 3 28 693 no_subtype FALSE canonical NA NA 5638 None 7 11 0 FALSE 0 0 NA C coding 1832 5496 262 5757 PB.2717.2 chr4 + 3931 15 novel_in_catalog ADD1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 2030 None 2 31 2 FALSE 0 0 NA B coding 737 2211 170 2380 PB.4000.4 chr6 + 2931 26 novel_not_in_catalog MYO6 novel NA NA NA NA no_subtype FALSE canonical NA NA 2791 None 2 7 1 FALSE 0 0 NA B coding 609 1827 1103 2929 PB.4000.3 chr6 + 5592 32 novel_in_catalog MYO6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 3794 None 3 9 0 FALSE 0 0 NA B coding 1253 3759 233 3991 PB.8570.1 chr16 + 6291 3 novel_in_catalog ZNF646 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 5751 None 8 8 0 FALSE 0 0 NA C coding 1832 5496 375 5870 PB.4000.1 chr6 + 3053 27 incomplete-splice_match MYO6 ENST00000369977.7 5597 35 -20 2564 3prime_fragment FALSE canonical NA NA 3026 None 8 0 0 FALSE 0 0 NA B coding 964 2892 160 3051 PB.3467.2 chr5 - 5446 2 novel_not_in_catalog IRF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 5302 None 3 32 0 TRUE 0 0 NA C coding 139 417 1226 1642 PB.6023.3 chr10 + 1747 1 incomplete-splice_match PDCD4 ENST00000280154.11 3602 12 1851 5 no_subtype FALSE canonical NA NA NA None 3 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.4283.1 chr7 - 6050 6 genic_intron novelGene_39 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 624 None 2 37 2 FALSE 0 0 NA A coding 106 318 33 350 PB.3553.1 chr5 - 2260 7 full-splice_match GNPDA1 ENST00000311337.10 2273 7 4 9 no_subtype FALSE canonical NA NA 33 None 5 8 0 FALSE 0 0 NA C coding 289 867 40 906 PB.744.2 chr1 - 4561 22 full-splice_match SMG5 ENST00000361813.5 4559 22 -5 3 no_subtype FALSE canonical NA NA 224 None 11 2 0 FALSE 0 0 NA C coding 1016 3048 151 3198 PB.8769.2 chr16 - 3059 6 novel_not_in_catalog SDR42E1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 172 None 5 9 1 TRUE 0 0 NA A coding 393 1179 426 1604 PB.2592.3 chr3 - 2714 5 genic_intron novelGene_1322 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 222 None 2 17 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.3348.2 chr5 - 1652 13 novel_not_in_catalog SERINC5 novel NA NA NA NA no_subtype FALSE canonical NA NA 178 None 65 1 0 TRUE 0 0 NA B coding 461 1383 152 1534 PB.552.2 chr1 + 5599 5 fusion RBM15,LAMTOR5-AS1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5360 None 2 22 0 TRUE 0 0 NA A coding 925 2775 107 2881 PB.9362.1 chr17 + 1184 5 full-splice_match MRPS7 ENST00000245539.10 1406 5 220 2 no_subtype TRUE canonical NA NA 514 None 2 1 0 FALSE 0 0 NA A coding 242 726 8 733 PB.552.1 chr1 + 3035 2 full-splice_match RBM15 ENST00000487146.6 3316 2 112 169 no_subtype FALSE canonical NA NA 2834 None 12 4 0 FALSE 0 0 NA A coding 925 2775 104 2878 PB.3428.1 chr5 - 1537 4 full-splice_match ATG12 ENST00000509910.1 4333 4 294 2502 no_subtype FALSE canonical NA NA 175 None 33 8 0 FALSE 0 0 NA A coding 140 420 13 432 PB.10783.2 chr22 - 4090 12 full-splice_match MKL1 ENST00000407029.5 4091 12 2 -1 no_subtype FALSE canonical NA NA 212 None 14 17 0 FALSE 0 0 NA C coding 931 2793 206 2998 PB.1615.2 chr2 + 6009 1 antisense novelGene_RP11-190J23.1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 21 0 FALSE 0 0 NA A coding 104 312 3736 4047 PB.7959.160 chr14 - 1539 9 fusion CH17-262H11.1,IGHG1,IGHG3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 100 None 3 8 4 TRUE 0 0 NA B coding 196 588 816 1403 PB.3847.1 chr6 + 539 6 full-splice_match RPS18 ENST00000439602.6 613 6 67 7 no_subtype TRUE canonical NA NA 426 None 5 0 0 FALSE 0 0 NA A coding 152 456 44 499 PB.59.1 chr1 + 5552 23 full-splice_match CLCN6 ENST00000346436.10 5583 23 17 14 no_subtype FALSE canonical NA NA 2564 None 2 25 0 FALSE 0 0 NA A coding 869 2607 36 2642 PB.889.3 chr1 + 1463 3 novel_in_catalog TOR3A novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 441 None 2 9 0 FALSE 0 0 NA C coding 99 297 393 689 PB.889.2 chr1 + 2023 6 full-splice_match TOR3A ENST00000367627.7 2724 6 694 7 no_subtype FALSE canonical NA NA 1001 None 7 9 0 FALSE 0 0 NA C coding 397 1191 59 1249 PB.889.1 chr1 - 3145 2 antisense novelGene_FAM20B_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1374 None 2 25 0 FALSE 0 0 NA B coding 102 306 2460 2765 PB.9413.5 chr17 - 2243 7 novel_not_in_catalog LGALS3BP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 97 None 3 6 2 TRUE 0 0 NA C coding 585 1755 169 1923 PB.7473.1 chr13 - 3729 4 genic_intron novelGene_458 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1626 None 2 29 3 FALSE 0 0 NA A non_coding NA NA NA NA PB.1878.2 chr2 + 1744 9 full-splice_match DES ENST00000373960.3 2248 9 491 13 no_subtype FALSE canonical NA NA 966 None 32 0 0 FALSE 0 0 NA C coding 208 624 382 1005 PB.1870.5 chr2 - 3756 16 novel_not_in_catalog ATG9A novel NA NA NA NA no_subtype FALSE canonical NA NA 92 None 4 5 0 FALSE 0 0 NA C coding 839 2517 174 2690 PB.1891.4 chr2 - 3613 2 genic_intron novelGene_1404 novel NA NA NA NA no_subtype TRUE canonical NA NA 2067 None 2 27 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10407.1 chr20 - 1670 5 full-splice_match SDC4 ENST00000372733.3 2613 5 -1 944 no_subtype FALSE canonical NA NA 101 None 23 5 0 FALSE 0 0 NA A coding 198 594 42 635 PB.7226.5 chr12 - 3732 19 novel_in_catalog SART3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 332 None 4 9 1 FALSE 0 0 NA B coding 981 2943 21 2963 PB.1891.3 chr2 - 3100 1 novel_in_catalog CUL3 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 45 0 FALSE 0 0 NA A coding 139 417 1301 1717 PB.1870.4 chr2 - 3718 15 full-splice_match ATG9A ENST00000396761.6 3799 15 78 3 no_subtype FALSE canonical NA NA 105 None 4 5 0 FALSE 0 0 NA C coding 839 2517 135 2651 PB.6002.1 chr10 + 1573 11 novel_not_in_catalog AS3MT novel NA NA NA NA no_subtype FALSE canonical NA NA 1081 None 2 2 1 FALSE 0 0 NA A coding 375 1125 62 1186 PB.1870.7 chr2 - 3875 17 novel_in_catalog ATG9A novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 48 None 8 3 0 FALSE 0 0 NA C coding 839 2517 295 2811 PB.2929.1 chr4 - 6301 2 genic_intron novelGene_770 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2228 None 2 43 1 FALSE 0 0 NA A coding 104 312 1797 2108 PB.304.1 chr1 - 2564 8 novel_in_catalog FOXJ3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 143 None 3 6 0 FALSE 0 0 NA C coding 315 945 161 1105 PB.4462.4 chr7 + 1405 4 novel_in_catalog NCF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1132 None 3 7 0 FALSE 0 0 NA C coding 265 795 457 1251 PB.10764.9 chr22 - 3563 16 novel_in_catalog SUN2 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 167 None 2 11 0 FALSE 0 0 NA B coding 668 2004 29 2032 PB.7679.1 chr14 - 1332 2 novel_not_in_catalog FKBP3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1048 None 2 7 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.10764.1 chr22 - 1532 1 incomplete-splice_match SUN2 ENST00000405018.5 4022 18 2484 7 no_subtype FALSE canonical NA NA NA None 5 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.11010.1 chrX + 4259 9 novel_not_in_catalog AR novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3677 None 2 13 1 TRUE 0 0 NA A coding 902 2706 1125 3830 PB.8438.9 chr16 - 3546 3 genic_intron novelGene_93 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3283 None 2 23 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10048.1 chr19 + 1612 10 full-splice_match TOMM40 ENST00000252487.9 1707 10 44 51 no_subtype FALSE canonical NA NA 1003 None 2 1 0 FALSE 0 0 NA A coding 361 1083 58 1140 PB.5999.2 chr10 + 2630 4 full-splice_match WBP1L ENST00000448841.5 4085 4 72 1383 no_subtype FALSE canonical NA NA 367 None 48 9 0 FALSE 0 0 NA C coding 363 1089 13 1101 PB.9573.5 chr18 - 1790 1 novel_in_catalog TCF4 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 13 0 FALSE 0 0 NA C coding 157 471 372 842 PB.9573.4 chr18 - 1767 13 full-splice_match TCF4 ENST00000570287.6 3163 13 172 1224 no_subtype FALSE canonical NA NA 145 None 7 3 0 FALSE 0 0 NA C coding 507 1521 77 1597 PB.7425.1 chr13 + 1931 10 incomplete-splice_match BRCA2 ENST00000544455.5 10984 28 43 9010 3prime_fragment FALSE canonical NA NA 977 None 2 7 0 FALSE 0 0 NA A coding 582 1746 185 1930 PB.5999.6 chr10 + 1764 1 incomplete-splice_match WBP1L ENST00000369889.5 4107 4 2332 12 no_subtype FALSE canonical NA NA NA None 24 10 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9573.1 chr18 - 1807 13 full-splice_match TCF4 ENST00000457482.7 2372 13 381 184 no_subtype FALSE canonical NA NA 172 None 28 1 0 FALSE 0 0 NA C coding 511 1533 104 1636 PB.5045.4 chr8 - 2706 14 novel_in_catalog PABPC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 697 None 9 2 0 FALSE 0 0 NA C coding 479 1437 1174 2610 PB.6419.3 chr11 + 1823 5 novel_not_in_catalog ARL2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 538 None 2 12 0 TRUE 0 0 NA C coding 169 507 37 543 PB.2192.1 chr3 - 896 2 full-splice_match GPX1 ENST00000419783.1 1146 2 236 14 no_subtype FALSE canonical NA NA 338 None 11 3 0 FALSE 0 0 NA A coding 145 435 261 695 PB.1343.10 chr2 - 1790 3 novel_not_in_catalog PPP4R3B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 31 None 2 7 0 TRUE 0 0 NA B coding 74 222 138 359 PB.2577.2 chr3 + 1865 2 novel_not_in_catalog SKIL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1829 None 2 10 0 TRUE 0 0 NA A non_coding NA NA NA NA PB.8769.3 chr16 - 3110 2 intergenic novelGene_758 novel NA NA NA NA no_subtype FALSE canonical NA NA 951 None 2 13 1 FALSE 0 0 NA A coding 99 297 2802 3098 PB.1094.2 chr1 - 2498 6 full-splice_match JMJD4 ENST00000615711.4 2591 6 43 50 no_subtype FALSE canonical NA NA 357 None 3 5 0 FALSE 0 0 NA C coding 417 1251 96 1346 PB.6900.4 chr12 + 3113 19 novel_not_in_catalog DNM1L novel NA NA NA NA no_subtype FALSE canonical NA NA 2853 None 2 10 1 TRUE 0 0 NA B coding 272 816 2092 2907 PB.1416.1 chr2 + 2550 13 full-splice_match SMYD5 ENST00000389501.8 2593 13 23 20 no_subtype FALSE canonical NA NA 1128 None 11 10 0 FALSE 0 0 NA C coding 418 1254 23 1276 PB.1910.3 chr2 + 4137 1 full-splice_match RNU6-268P ENST00000364174.1 107 1 -4032 2 no_subtype FALSE canonical NA NA NA None 2 33 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7202.1 chr12 - 1740 10 incomplete-splice_match GLT8D2 ENST00000548660.5 1835 11 386 -291 5prime_fragment FALSE canonical NA NA 243 None 2 0 0 FALSE 0 0 NA A coding 349 1047 272 1318 PB.8576.1 chr16 - 2567 4 novel_not_in_catalog PYCARD novel NA NA NA NA no_subtype FALSE non_canonical NA NA 321 None 2 16 1 TRUE 0 0 NA B coding 195 585 48 632 PB.6900.1 chr12 + 2838 19 novel_not_in_catalog DNM1L novel NA NA NA NA no_subtype FALSE canonical NA NA 2109 None 5 2 0 TRUE 0 0 NA B coding 699 2097 67 2163 PB.6900.2 chr12 + 2845 20 novel_not_in_catalog DNM1L novel NA NA NA NA no_subtype FALSE canonical NA NA 2120 None 4 3 1 TRUE 0 0 NA B coding 710 2130 45 2174 PB.8576.2 chr16 - 2587 4 novel_not_in_catalog PYCARD novel NA NA NA NA no_subtype TRUE non_canonical NA NA 343 None 2 14 0 TRUE 0 0 NA B coding 195 585 70 654 PB.2257.7 chr3 - 2770 2 novel_in_catalog ARHGEF3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 78 None 30 9 0 FALSE 0 0 NA C coding 124 372 455 826 PB.10677.4 chr22 - 2843 15 novel_in_catalog TFIP11 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 88 None 3 6 1 FALSE 0 0 NA C coding 837 2511 252 2762 PB.2257.4 chr3 - 2012 10 full-splice_match ARHGEF3 ENST00000296315.7 3602 10 18 1572 no_subtype FALSE canonical NA NA 247 None 3 0 0 FALSE 0 0 NA C coding 526 1578 152 1729 PB.10677.1 chr22 - 2689 13 novel_in_catalog TFIP11 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 88 None 6 3 0 FALSE 0 0 NA C coding 837 2511 98 2608 PB.10677.3 chr22 - 2750 15 novel_not_in_catalog TFIP11 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 88 None 2 5 2 TRUE 0 0 NA C coding 836 2508 162 2669 PB.10677.2 chr22 - 2712 14 full-splice_match TFIP11 ENST00000407148.5 2789 14 67 10 no_subtype FALSE canonical NA NA 36 None 75 2 0 FALSE 0 0 NA C coding 837 2511 123 2633 PB.1416.2 chr2 + 1499 2 full-splice_match SMYD5 ENST00000486518.1 566 2 407 -1340 no_subtype FALSE canonical NA NA 73 None 2 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.6479.1 chr11 + 1694 15 full-splice_match RPS6KB2 ENST00000312629.9 1733 15 32 7 no_subtype FALSE canonical NA NA 1281 None 14 5 0 FALSE 0 0 NA C coding 482 1446 14 1459 PB.5513.3 chr9 + 2985 5 novel_not_in_catalog ZBTB43 novel NA NA NA NA no_subtype TRUE canonical NA NA 262 None 2 5 2 TRUE 0 0 NA C coding 467 1401 286 1686 PB.6479.3 chr11 + 1706 15 novel_not_in_catalog RPS6KB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1297 None 2 10 3 FALSE 0 0 NA C coding 281 843 633 1475 PB.6479.2 chr11 + 2813 14 novel_in_catalog RPS6KB2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2404 None 2 16 0 FALSE 0 0 NA C coding 282 846 1737 2582 PB.2273.1 chr3 - 1463 10 novel_not_in_catalog FAM3D novel NA NA NA NA no_subtype FALSE non_canonical NA NA 197 None 5 3 1 FALSE 0 0 NA B coding 233 699 428 1126 PB.2273.3 chr3 - 1558 1 genic_intron novelGene_565 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2273.2 chr3 - 1203 10 novel_not_in_catalog FAM3D novel NA NA NA NA no_subtype FALSE non_canonical NA NA 168 None 2 2 1 FALSE 0 0 NA B coding 221 663 207 869 PB.4392.1 chr7 + 1816 7 full-splice_match STK17A ENST00000319357.5 3368 7 40 1512 no_subtype FALSE canonical NA NA 1059 None 37 3 0 FALSE 0 0 NA A coding 414 1242 140 1381 PB.6345.1 chr11 - 3092 19 full-splice_match PATL1 ENST00000300146.9 4072 19 -32 1012 no_subtype FALSE canonical NA NA 132 None 21 3 0 FALSE 0 0 NA C coding 770 2310 118 2427 PB.6644.1 chr11 + 1311 4 full-splice_match SDHD ENST00000375549.7 1439 4 99 29 no_subtype FALSE canonical NA NA 350 None 15 8 0 FALSE 0 0 NA A coding 159 477 37 513 PB.6597.1 chr11 - 2299 1 antisense novelGene_ENDOD1_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.5588.4 chr9 - 5552 1 genic_intron novelGene_1142 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5043.2 chr8 - 3894 10 full-splice_match RNF19A ENST00000341084.6 4285 10 400 -9 no_subtype FALSE canonical NA NA 61 None 7 8 0 FALSE 0 0 NA A coding 807 2421 248 2668 PB.5515.1 chr9 + 3598 1 full-splice_match ZBTB34 ENST00000373452.2 6528 1 2909 21 no_subtype FALSE canonical NA NA NA None 2 7 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1434.1 chr2 + 1543 8 full-splice_match HTRA2 ENST00000258080.7 2370 8 647 180 no_subtype FALSE canonical NA NA 1194 None 6 0 0 FALSE 0 0 NA A coding 199 597 761 1357 PB.6411.1 chr11 - 2871 20 full-splice_match PYGM ENST00000164139.3 3198 20 323 4 no_subtype FALSE canonical NA NA 319 None 13 1 0 FALSE 0 0 NA A coding 842 2526 77 2602 PB.8105.1 chr15 - 2704 1 genic_intron novelGene_547 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 8 11 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2667.5 chr3 + 1545 1 genic_intron novelGene_1355 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 5 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3380.1 chr5 + 3819 21 full-splice_match SLF1 ENST00000265140.9 5905 21 325 1761 no_subtype TRUE canonical NA NA 2789 None 2 5 1 FALSE 0 0 NA A coding 1058 3174 95 3268 PB.1380.4 chr2 + 3006 5 novel_not_in_catalog CEP68 novel NA NA NA NA no_subtype FALSE canonical NA NA 2037 None 8 9 0 TRUE 0 0 NA B coding 712 2136 154 2289 PB.1486.1 chr2 - 1421 4 full-splice_match NEURL3 ENST00000451794.5 1461 4 34 6 no_subtype FALSE canonical NA NA 65 None 2 4 0 FALSE 0 0 NA A coding 262 786 38 823 PB.4970.1 chr8 + 1488 11 novel_not_in_catalog TERF1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1368 None 5 4 1 TRUE 0 0 NA A coding 419 1257 15 1271 PB.7691.2 chr14 - 3245 11 full-splice_match L2HGDH ENST00000421284.7 1958 11 5 -1292 no_subtype FALSE canonical NA NA 214 None 2 13 0 FALSE 0 0 NA C coding 463 1389 75 1463 PB.7691.1 chr14 - 3380 12 novel_not_in_catalog L2HGDH novel NA NA NA NA no_subtype FALSE non_canonical NA NA 214 None 2 15 0 TRUE 0 0 NA C coding 463 1389 75 1463 PB.6908.4 chr12 + 1669 11 full-splice_match PPHLN1 ENST00000395580.7 1693 11 24 0 no_subtype FALSE canonical NA NA 1033 None 4 7 0 FALSE 0 0 NA C coding 374 1122 104 1225 PB.1399.10 chr2 + 1432 1 incomplete-splice_match MXD1 ENST00000540449.5 5580 5 4144 5 no_subtype FALSE canonical NA NA NA None 8 13 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.842.14 chr1 + 2659 2 novel_not_in_catalog RCSD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 30 None 2 21 1 TRUE 0 0 NA C coding 115 345 906 1250 PB.842.12 chr1 + 2191 1 novel_in_catalog RCSD1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 25 7 0 FALSE 0 0 NA C coding 99 297 1287 1583 PB.1228.1 chr2 + 3852 6 full-splice_match SLC35F6 ENST00000344420.9 3898 6 3 43 no_subtype TRUE canonical NA NA 705 None 24 15 0 FALSE 0 0 NA A coding 371 1113 60 1172 PB.6908.2 chr12 + 1461 9 novel_in_catalog PPHLN1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 818 None 9 5 0 FALSE 0 0 NA C coding 312 936 75 1010 PB.2079.2 chr3 + 3709 9 novel_not_in_catalog GPD1L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 818 None 2 19 2 TRUE 0 0 NA B coding 234 702 75 776 PB.3549.1 chr5 - 5443 31 novel_in_catalog ARAP3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 68 None 2 9 1 FALSE 0 0 NA A coding 985 2955 288 3242 PB.9563.1 chr18 - 611 7 full-splice_match RPL17 ENST00000580261.5 669 7 44 14 no_subtype FALSE canonical NA NA 22 None 4 0 0 FALSE 0 0 NA A coding 184 552 36 587 PB.8619.1 chr16 + 2963 1 genic_intron novelGene_548 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5509.1 chr9 + 3190 6 incomplete-splice_match GAPVD1 ENST00000474637.5 2545 9 1321 -1966 internal_fragment FALSE canonical NA NA 804 None 2 15 0 FALSE 0 0 NA B coding 301 903 40 942 PB.545.1 chr1 + 3716 18 novel_not_in_catalog AMPD2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2606 None 26 16 1 TRUE 0 0 NA C coding 517 1551 1263 2813 PB.1124.1 chr1 - 2181 1 incomplete-splice_match IRF2BP2 ENST00000366610.7 4615 2 2406 29 no_subtype FALSE canonical NA NA NA None 16 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1615.7 chr2 + 5434 2 genic_intron novelGene_1212 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1311 None 2 34 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5985.1 chr10 + 1626 1 full-splice_match HPS6 ENST00000299238.6 2649 1 1020 3 no_subtype FALSE canonical NA NA NA None 5 12 0 FALSE 0 0 NA A coding 439 1317 74 1390 PB.6246.1 chr11 - 2991 18 novel_not_in_catalog KIF18A novel NA NA NA NA no_subtype FALSE canonical NA NA 58 None 5 2 0 TRUE 0 0 NA A coding 898 2694 105 2798 PB.7959.55 chr14 - 1483 9 fusion IGHA1,IGHV4-39 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 77 None 5 13 4 TRUE 0 0 NA B coding 254 762 675 1436 PB.7720.2 chr14 + 1423 3 genic_intron novelGene_536 novel NA NA NA NA no_subtype FALSE canonical NA NA 232 None 7 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1419.1 chr2 - 1376 9 full-splice_match DUSP11 ENST00000272444.7 1653 9 85 192 no_subtype FALSE canonical NA NA 199 None 16 6 0 FALSE 0 0 NA A coding 330 990 99 1088 PB.9184.1 chr17 - 3721 12 full-splice_match PLEKHM1 ENST00000430334.7 5263 12 -6 1548 no_subtype FALSE canonical NA NA 99 None 17 3 0 FALSE 0 0 NA A coding 1056 3168 141 3308 PB.7158.1 chr12 - 2188 4 full-splice_match UBE2N ENST00000318066.6 5186 4 312 2686 no_subtype FALSE canonical NA NA 96 None 2 11 0 FALSE 0 0 NA C coding 152 456 67 522 PB.9317.9 chr17 + 1658 1 full-splice_match RP11-360N9.3 ENST00000623200.1 1200 1 -486 28 no_subtype FALSE canonical NA NA NA None 7 8 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7325.1 chr12 + 1737 12 full-splice_match P2RX4 ENST00000337233.8 2032 12 291 4 no_subtype FALSE canonical NA NA 1157 None 36 17 2 FALSE 0 0 NA C coding 388 1164 18 1181 PB.7808.2 chr14 - 1980 14 novel_in_catalog ENTPD5 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 189 None 8 6 0 FALSE 0 0 NA C coding 428 1284 260 1543 PB.9317.6 chr17 + 2799 7 genic_intron novelGene_633 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2693 None 2 17 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8296.1 chr15 + 3506 4 novel_not_in_catalog CRTC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1216 None 2 26 1 TRUE 0 0 NA A coding 113 339 17 355 PB.7808.1 chr14 - 2015 16 full-splice_match ENTPD5 ENST00000334696.10 5842 16 28 3799 no_subtype TRUE canonical NA NA 55 None 2 5 1 FALSE 0 0 NA C coding 428 1284 293 1576 PB.9317.3 chr17 + 1727 4 novel_in_catalog PITPNC1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 933 None 2 4 1 FALSE 0 0 NA C coding 110 330 648 977 PB.9317.2 chr17 + 1339 3 novel_not_in_catalog PITPNC1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1091 None 2 7 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.9317.1 chr17 + 3494 10 full-splice_match PITPNC1 ENST00000580974.5 6182 10 49 2639 no_subtype FALSE canonical NA NA 1448 None 5 6 0 FALSE 0 0 NA C coding 268 804 648 1451 PB.2358.5 chr3 - 1213 8 novel_in_catalog CD47 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 160 None 6 1 0 FALSE 0 0 NA C coding 293 879 115 993 PB.2358.4 chr3 - 2849 12 novel_not_in_catalog CD47 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 219 None 3 15 2 TRUE 0 0 NA C coding 310 930 174 1103 PB.897.4 chr1 + 2817 13 novel_in_catalog QSOX1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2118 None 2 6 0 FALSE 0 0 NA C coding 701 2103 22 2124 PB.378.3 chr1 - 1815 11 full-splice_match YIPF1 ENST00000072644.5 1851 11 31 5 no_subtype FALSE canonical NA NA 71 None 5 2 0 FALSE 0 0 NA C coding 306 918 341 1258 PB.6389.4 chr11 - 2248 21 full-splice_match NXF1 ENST00000294172.6 2346 21 52 46 no_subtype FALSE canonical NA NA 112 None 6 5 0 FALSE 0 0 NA C coding 619 1857 85 1941 PB.2450.8 chr3 + 5610 12 novel_not_in_catalog ABTB1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2620 None 3 39 1 TRUE 0 0 NA C coding 238 714 1140 1853 PB.2358.3 chr3 - 1272 9 full-splice_match CD47 ENST00000355354.11 5020 9 -22 3770 no_subtype FALSE canonical NA NA 185 None 8 1 0 FALSE 0 0 NA C coding 305 915 140 1054 PB.2358.2 chr3 - 2743 10 novel_not_in_catalog CD47 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 167 None 5 14 1 TRUE 0 0 NA C coding 310 930 122 1051 PB.6145.1 chr11 - 3577 23 novel_not_in_catalog OSBPL5 novel NA NA NA NA no_subtype TRUE canonical NA NA 113 None 13 9 0 TRUE 0 0 NA A coding 879 2637 135 2771 PB.378.4 chr1 - 1688 10 novel_not_in_catalog YIPF1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 69 None 2 2 1 TRUE 0 0 NA C coding 295 885 339 1223 PB.1106.2 chr1 - 3119 5 full-splice_match TAF5L ENST00000258281.6 3112 5 -9 2 no_subtype FALSE canonical NA NA 172 None 2 3 0 FALSE 0 0 NA C coding 589 1767 176 1942 PB.5907.1 chr10 + 1811 14 incomplete-splice_match KIF20B ENST00000260753.8 6306 33 8 4487 3prime_fragment FALSE canonical NA NA 1786 None 2 0 0 FALSE 0 0 NA B coding 582 1746 65 1810 PB.712.3 chr1 - 3442 14 novel_not_in_catalog SHC1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 716 None 40 15 1 TRUE 0 0 NA B coding 584 1752 222 1973 PB.5518.1 chr9 + 1528 7 novel_not_in_catalog GARNL3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1075 None 2 2 0 FALSE 0 0 NA A coding 243 729 516 1244 PB.5543.4 chr9 + 3679 22 novel_in_catalog ODF2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2788 None 4 3 0 FALSE 0 0 NA C coding 824 2472 503 2974 PB.378.5 chr1 - 1870 12 novel_in_catalog YIPF1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 97 None 2 1 0 FALSE 0 0 NA C coding 306 918 367 1284 PB.8119.1 chr15 + 3216 6 novel_in_catalog RNF111 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1766 None 2 14 0 FALSE 0 0 NA B coding 566 1698 401 2098 PB.8119.2 chr15 + 3369 1 novel_in_catalog RNF111 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.4513.9 chr7 - 5738 5 novel_not_in_catalog SAMD9L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 168 None 14 6 0 FALSE 0 0 NA B coding 1584 4752 678 5429 PB.2566.1 chr3 - 1355 9 full-splice_match PDCD10 ENST00000473645.6 1360 9 3 2 no_subtype FALSE canonical NA NA 131 None 11 3 1 FALSE 0 0 NA C coding 210 630 327 956 PB.4513.2 chr7 - 2978 1 incomplete-splice_match SAMD9L ENST00000437805.5 5757 6 2593 187 no_subtype FALSE canonical NA NA NA None 11 3 0 FALSE 0 0 NA B coding 985 2955 24 2978 PB.2088.1 chr3 + 3170 18 full-splice_match PDCD6IP ENST00000307296.7 6161 18 288 2703 no_subtype FALSE canonical NA NA 2521 None 120 3 0 FALSE 0 0 NA C coding 868 2604 90 2693 PB.4513.1 chr7 - 1037 5 novel_not_in_catalog SAMD9L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 163 None 11 4 0 FALSE 0 0 NA B coding 105 315 721 1035 PB.4513.6 chr7 - 5766 5 novel_not_in_catalog SAMD9L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 206 None 3 12 1 TRUE 0 0 NA B coding 1584 4752 703 5454 PB.4513.7 chr7 - 5677 5 novel_not_in_catalog SAMD9L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 168 None 4 10 1 TRUE 0 0 NA B coding 1584 4752 614 5365 PB.4554.3 chr7 - 2283 5 full-splice_match TSC22D4 ENST00000300181.6 2383 5 74 26 no_subtype FALSE canonical NA NA 412 None 34 1 0 FALSE 0 0 NA C coding 395 1185 682 1866 PB.4513.5 chr7 - 5670 5 novel_not_in_catalog SAMD9L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 125 None 2 12 1 TRUE 0 0 NA B coding 1584 4752 607 5358 PB.7226.3 chr12 - 6066 16 novel_in_catalog SART3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 327 None 2 33 0 FALSE 0 0 NA B coding 489 1467 3830 5296 PB.841.3 chr1 - 2907 6 novel_not_in_catalog CREG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1335 None 2 15 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.9365.2 chr17 + 3302 3 genic_intron novelGene_704 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2885 None 3 29 2 FALSE 0 0 NA A coding 22 66 282 347 PB.8913.1 chr17 + 3574 19 full-splice_match CNTROB ENST00000563694.5 3705 19 120 11 no_subtype TRUE canonical NA NA 3391 None 10 6 0 FALSE 0 0 NA A coding 903 2709 806 3514 PB.2088.3 chr3 + 2877 17 novel_in_catalog PDCD6IP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2225 None 2 1 0 FALSE 0 0 NA C coding 678 2034 364 2397 PB.841.2 chr1 - 1784 5 novel_not_in_catalog CREG1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 368 None 3 8 2 TRUE 0 0 NA B coding 173 519 15 533 PB.3997.2 chr6 - 2568 7 full-splice_match TMEM30A ENST00000230461.10 4594 7 204 1822 no_subtype FALSE canonical NA NA 363 None 45 8 0 FALSE 0 0 NA C coding 361 1083 127 1209 PB.3997.1 chr6 - 2585 1 incomplete-splice_match TMEM30A ENST00000230461.10 4594 7 1999 11 no_subtype FALSE canonical NA NA NA None 6 12 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.2134.4 chr3 - 1727 1 genic_intron novelGene_443 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 10 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3201.1 chr5 + 1980 3 full-splice_match RAI14 ENST00000514931.5 550 3 -40 -1390 no_subtype FALSE canonical NA NA 189 None 2 7 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8433.1 chr16 + 5758 22 novel_not_in_catalog CIITA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 5718 None 2 14 0 TRUE 0 0 NA C coding 1228 3684 40 3723 PB.1121.1 chr1 + 2987 1 full-splice_match MAP10 ENST00000418460.2 3516 1 524 5 no_subtype FALSE canonical NA NA NA None 4 10 0 FALSE 0 0 NA A coding 905 2715 35 2749 PB.11107.1 chrX - 3721 1 antisense novelGene_TMEM164_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 7 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8974.1 chr17 + 3074 10 full-splice_match EPN2 ENST00000347697.6 4664 10 47 1543 no_subtype FALSE canonical NA NA 1857 None 5 6 0 FALSE 0 0 NA C coding 575 1725 429 2153 PB.775.5 chr1 + 2650 2 novel_not_in_catalog FCRL6 novel NA NA NA NA no_subtype FALSE canonical NA NA 102 None 6 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2249.1 chr3 - 1908 13 full-splice_match RFT1 ENST00000296292.7 5108 13 27 3173 no_subtype FALSE canonical NA NA 98 None 2 7 0 FALSE 0 0 NA A coding 541 1623 36 1658 PB.887.1 chr1 + 2507 5 novel_in_catalog RALGPS2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 474 None 2 19 0 FALSE 0 0 NA B coding 102 306 262 567 PB.7822.2 chr14 - 1341 5 full-splice_match TMED10 ENST00000303575.8 4127 5 7 2779 no_subtype FALSE canonical NA NA 270 None 144 5 0 FALSE 0 0 NA C coding 219 657 46 702 PB.887.2 chr1 + 6384 21 novel_not_in_catalog RALGPS2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1883 None 2 38 1 TRUE 0 0 NA B coding 557 1671 240 1910 PB.10665.1 chr22 - 2735 6 novel_not_in_catalog DERL3 novel NA NA NA NA no_subtype TRUE canonical NA NA 119 None 2 10 0 TRUE 0 0 NA A coding 138 414 27 440 PB.607.2 chr1 + 1629 1 genic_intron novelGene_1035 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 9 14 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2425.1 chr3 - 3054 12 novel_not_in_catalog PARP9 novel NA NA NA NA no_subtype FALSE canonical NA NA 71 None 48 4 1 TRUE 0 0 NA B coding 819 2457 161 2617 PB.3156.2 chr4 - 4349 11 incomplete-splice_match FAT1 ENST00000614102.4 14758 29 10407 2 5prime_fragment FALSE canonical NA NA 137 None 2 15 0 FALSE 0 0 NA B coding 1003 3009 543 3551 PB.9909.1 chr19 + 1545 1 antisense novelGene_ZNF626_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 16 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3156.3 chr4 - 4085 10 incomplete-splice_match FAT1 ENST00000614102.4 14758 29 10662 11 5prime_fragment FALSE canonical NA NA 80 None 4 8 0 FALSE 0 0 NA B coding 1003 3009 288 3296 PB.7790.1 chr14 - 1287 4 full-splice_match SYNJ2BP ENST00000256366.5 7015 4 66 5662 no_subtype FALSE canonical NA NA 80 None 2 11 0 FALSE 0 0 NA A coding 145 435 17 451 PB.8249.1 chr15 + 1474 15 novel_not_in_catalog FAH novel NA NA NA NA no_subtype FALSE canonical NA NA 1242 None 13 0 0 FALSE 0 0 NA B coding 419 1257 63 1319 PB.8242.3 chr15 + 2691 8 novel_not_in_catalog MORF4L1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1940 None 2 26 0 TRUE 0 0 NA C coding 173 519 1504 2022 PB.1065.1 chr1 + 3829 13 full-splice_match BROX ENST00000340934.9 4124 13 281 14 no_subtype FALSE canonical NA NA 1274 None 3 20 0 FALSE 0 0 NA C coding 411 1233 126 1358 PB.8242.2 chr15 + 1475 6 novel_not_in_catalog MORF4L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 305 None 5 10 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.10764.13 chr22 - 3574 16 novel_not_in_catalog SUN2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 172 None 2 14 1 TRUE 0 0 NA B coding 673 2019 29 2047 PB.10764.10 chr22 - 3764 18 novel_in_catalog SUN2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 45 None 3 12 0 FALSE 0 0 NA B coding 717 2151 83 2233 PB.8249.3 chr15 + 1354 14 novel_in_catalog FAH novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1153 None 2 0 0 FALSE 0 0 NA B coding 349 1047 184 1230 PB.8249.4 chr15 + 1380 14 novel_not_in_catalog FAH novel NA NA NA NA no_subtype FALSE canonical NA NA 1145 None 6 0 0 FALSE 0 0 NA B coding 349 1047 176 1222 PB.6389.8 chr11 - 1790 11 full-splice_match STX5 ENST00000294179.7 1794 11 0 4 no_subtype FALSE canonical NA NA 135 None 40 3 0 FALSE 0 0 NA C coding 355 1065 155 1219 PB.6465.1 chr11 + 2862 21 full-splice_match ACTN3 ENST00000513398.1 2939 21 81 -4 no_subtype FALSE canonical NA NA 2563 None 3 3 0 FALSE 0 0 NA A coding 901 2703 17 2719 PB.4805.2 chr8 - 2861 7 novel_not_in_catalog CNOT7 novel NA NA NA NA no_subtype FALSE canonical NA NA 181 None 6 19 1 TRUE 0 0 NA C coding 244 732 277 1008 PB.4805.1 chr8 - 1656 7 full-splice_match CNOT7 ENST00000361272.8 6913 7 78 5179 no_subtype TRUE canonical NA NA 126 None 67 9 0 FALSE 0 0 NA C coding 285 855 222 1076 PB.6363.6 chr11 - 2903 5 novel_not_in_catalog CYB561A3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 249 None 2 16 0 TRUE 0 0 NA B coding 239 717 66 782 PB.6363.5 chr11 - 2274 7 novel_not_in_catalog CYB561A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 65 None 3 8 0 TRUE 0 0 NA B coding 242 726 81 806 PB.6363.4 chr11 - 2378 8 novel_not_in_catalog CYB561A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 122 None 2 8 0 TRUE 0 0 NA B coding 242 726 185 910 PB.4640.1 chr7 - 2741 5 novel_in_catalog ZNF800 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 649 None 9 3 0 FALSE 0 0 NA B coding 665 1995 708 2702 PB.1403.2 chr2 - 2643 12 novel_not_in_catalog TIA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 249 None 3 3 0 TRUE 0 0 NA C coding 246 738 621 1358 PB.6363.1 chr11 - 2422 8 novel_not_in_catalog CYB561A3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 123 None 20 16 0 TRUE 0 0 NA B coding 242 726 235 960 PB.8666.1 chr16 + 2751 17 novel_in_catalog C16orf70 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1262 None 32 12 3 FALSE 0 0 NA C coding 422 1266 81 1346 PB.2226.1 chr3 + 2022 11 incomplete-splice_match PARP3 ENST00000417220.6 2472 12 452 -2 internal_fragment TRUE canonical NA NA 1468 None 5 4 0 FALSE 0 0 NA A coding 533 1599 37 1635 PB.932.2 chr1 + 3191 5 full-splice_match RGS18 ENST00000367460.3 2150 5 283 -1324 no_subtype FALSE canonical NA NA 348 None 16 19 0 FALSE 0 0 NA C coding 52 156 448 603 PB.11117.8 chrX + 3549 26 incomplete-splice_match DOCK11 ENST00000276202.8 6625 53 3061 15 internal_fragment FALSE canonical NA NA 3104 None 10 1 0 FALSE 0 0 NA C coding 1036 3108 114 3221 PB.5053.1 chr8 - 1722 1 genic_intron novelGene_934 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 11 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9430.5 chr17 - 4098 16 novel_not_in_catalog SLC38A10 novel NA NA NA NA no_subtype FALSE canonical NA NA 514 None 4 18 0 TRUE 0 0 NA B coding 1043 3129 416 3544 PB.8272.28 chr15 + 5513 3 novel_in_catalog AKAP13 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 787 None 4 39 0 FALSE 0 0 NA B coding 119 357 478 834 PB.10605.1 chr21 - 2760 10 novel_not_in_catalog POFUT2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 149 None 29 10 0 TRUE 0 0 NA A coding 429 1287 19 1305 PB.7398.3 chr13 - 4361 13 novel_in_catalog MTMR6 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 147 None 2 17 1 FALSE 0 0 NA C coding 341 1023 124 1146 PB.11117.1 chrX + 6702 54 novel_in_catalog DOCK11 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 6246 None 5 4 0 FALSE 0 0 NA C coding 2086 6258 106 6363 PB.7398.1 chr13 - 3109 14 full-splice_match MTMR6 ENST00000381801.5 5659 14 629 1921 no_subtype FALSE canonical NA NA 157 None 18 2 0 FALSE 0 0 NA C coding 621 1863 134 1996 PB.3595.9 chr5 + 2556 10 novel_in_catalog G3BP1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1101 None 2 12 0 FALSE 0 0 NA C coding 401 1203 103 1305 PB.2511.5 chr3 + 2863 5 novel_not_in_catalog U2SURP novel NA NA NA NA no_subtype FALSE canonical NA NA 377 None 2 19 1 TRUE 0 0 NA B coding 137 411 4 414 PB.10679.1 chr22 - 2441 1 incomplete-splice_match MN1 ENST00000302326.4 7556 2 5111 5 no_subtype FALSE canonical NA NA NA None 2 12 0 FALSE 0 0 NA A coding 126 378 609 986 PB.8666.2 chr16 + 2906 16 full-splice_match C16orf70 ENST00000219139.7 2865 16 -46 5 no_subtype FALSE canonical NA NA 1416 None 2 9 0 FALSE 0 0 NA C coding 422 1266 235 1500 PB.9068.5 chr17 + 5732 22 novel_not_in_catalog AP2B1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2949 None 3 8 1 TRUE 0 0 NA C coding 937 2811 211 3021 PB.4083.1 chr6 - 1570 1 genic_intron novelGene_987 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.4620.1 chr7 + 2519 1 genic_intron novelGene_1024 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.7804.2 chr14 - 6190 14 novel_not_in_catalog ELMSAN1 novel NA NA NA NA no_subtype FALSE canonical NA NA 533 None 2 17 0 TRUE 0 0 NA A coding 1099 3297 781 4077 PB.4356.1 chr7 + 2730 18 full-splice_match FAM188B ENST00000265299.6 2733 18 0 3 no_subtype FALSE canonical NA NA 2302 None 2 19 2 FALSE 0 0 NA A coding 757 2271 78 2348 PB.10784.1 chr22 - 1765 11 novel_not_in_catalog SLC25A17 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 164 None 4 3 1 TRUE 0 0 NA A coding 307 921 114 1034 PB.4819.1 chr8 + 2888 18 full-splice_match FAM160B2 ENST00000450006.7 2846 18 -47 5 no_subtype FALSE canonical NA NA 2579 None 3 4 0 FALSE 0 0 NA C coding 743 2229 94 2322 PB.6017.2 chr10 + 4166 16 novel_not_in_catalog ADD3 novel NA NA NA NA no_subtype FALSE canonical NA NA 1935 None 11 7 0 TRUE 0 0 NA B coding 706 2118 108 2225 PB.4819.2 chr8 + 3685 17 full-splice_match FAM160B2 ENST00000289921.7 4245 17 40 520 no_subtype FALSE canonical NA NA 2099 None 8 9 0 FALSE 0 0 NA C coding 743 2229 7 2235 PB.5939.1 chr10 - 3188 15 full-splice_match TM9SF3 ENST00000371142.8 6141 15 71 2882 no_subtype FALSE canonical NA NA 248 None 7 8 0 FALSE 0 0 NA C coding 589 1767 147 1913 PB.9403.4 chr17 - 2969 19 novel_not_in_catalog TMC6 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 94 None 2 19 2 TRUE 0 0 NA B coding 674 2022 172 2193 PB.5939.3 chr10 - 3118 17 novel_not_in_catalog TM9SF3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 105 None 2 9 1 TRUE 0 0 NA C coding 545 1635 207 1841 PB.1491.1 chr2 - 3143 12 novel_not_in_catalog ANKRD23 novel NA NA NA NA no_subtype FALSE canonical NA NA 137 None 2 22 0 FALSE 0 0 NA A coding 192 576 934 1509 PB.11026.2 chrX - 1675 2 novel_not_in_catalog CXCR3 novel NA NA NA NA no_subtype FALSE canonical NA NA 136 None 2 11 0 FALSE 0 0 NA C coding 378 1134 95 1228 PB.9238.1 chr17 - 1959 2 antisense novelGene_LUC7L3_AS novel NA NA NA NA no_subtype FALSE non_canonical NA NA 294 None 2 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.6083.1 chr10 - 2744 12 novel_not_in_catalog DHX32 novel NA NA NA NA no_subtype FALSE canonical NA NA 103 None 10 2 0 FALSE 0 0 NA B coding 743 2229 351 2579 PB.9424.1 chr17 + 2687 17 full-splice_match SLC26A11 ENST00000572725.5 1862 17 -50 -775 no_subtype FALSE canonical NA NA 1820 None 2 9 0 FALSE 0 0 NA A coding 606 1818 92 1909 PB.7451.4 chr13 - 3567 9 full-splice_match ELF1 ENST00000239882.6 3566 9 -10 9 no_subtype FALSE canonical NA NA 97 None 92 4 0 FALSE 0 0 NA C coding 619 1857 326 2182 PB.7451.6 chr13 - 3137 8 novel_in_catalog ELF1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 106 None 2 15 2 FALSE 0 0 NA C coding 469 1407 335 1741 PB.3803.38 chr6 - 1477 8 novel_not_in_catalog HLA-B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 92 None 3 16 1 TRUE 0 0 NA C coding 116 348 20 367 PB.2131.1 chr3 + 2903 3 genic_intron novelGene_436 novel NA NA NA NA no_subtype FALSE canonical NA NA 256 None 2 18 0 FALSE 0 0 NA A coding 126 378 1956 2333 PB.7451.3 chr13 - 3851 11 novel_not_in_catalog ELF1 novel NA NA NA NA no_subtype FALSE canonical NA NA 368 None 3 10 0 TRUE 0 0 NA C coding 619 1857 597 2453 PB.3803.33 chr6 - 1432 9 novel_not_in_catalog HLA-B novel NA NA NA NA no_subtype TRUE non_canonical NA NA 94 None 3 3 1 TRUE 0 0 NA C coding 362 1086 22 1107 PB.3803.32 chr6 - 1551 8 novel_not_in_catalog HLA-B novel NA NA NA NA no_subtype FALSE canonical NA NA 94 None 4 11 1 FALSE 0 0 NA C coding 362 1086 22 1107 PB.3803.31 chr6 - 1702 9 novel_not_in_catalog HLA-B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 94 None 6 19 1 TRUE 0 0 NA C coding 362 1086 22 1107 PB.3803.30 chr6 - 1353 10 fusion HLA-C,HLA-B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 66 None 2 21 3 TRUE 0 0 NA B coding 384 1152 3 1154 PB.3803.37 chr6 - 1567 8 full-splice_match HLA-B ENST00000412585.6 1547 8 -24 4 no_subtype FALSE canonical NA NA 126 None 2 1 0 FALSE 0 0 NA C coding 362 1086 54 1139 PB.1090.3 chr1 - 4302 7 full-splice_match ITPKB ENST00000272117.7 5822 7 1518 2 no_subtype FALSE canonical NA NA 414 None 2 21 0 FALSE 0 0 NA C coding 434 1302 19 1320 PB.3803.35 chr6 - 1518 9 novel_not_in_catalog HLA-B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 94 None 128 3 1 TRUE 0 0 NA C coding 362 1086 22 1107 PB.3803.34 chr6 - 1461 8 novel_not_in_catalog HLA-B novel NA NA NA NA no_subtype FALSE canonical NA NA 92 None 89 2 0 FALSE 0 0 NA C coding 150 450 20 469 PB.2701.1 chr4 + 3223 14 novel_not_in_catalog PIGG novel NA NA NA NA no_subtype FALSE canonical NA NA 2861 None 3 2 0 TRUE 0 0 NA A coding 983 2949 127 3075 PB.2505.1 chr3 - 1783 1 genic_intron novelGene_1195 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.8222.1 chr15 - 2992 2 antisense novelGene_FBXO22_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 2123 None 3 29 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.9742.1 chr19 - 2745 7 novel_in_catalog ZNF426 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 600 None 6 8 1 FALSE 0 0 NA A coding 554 1662 725 2386 PB.4628.1 chr7 + 2701 4 full-splice_match LSM8 ENST00000249299.6 1305 4 132 -1528 no_subtype FALSE canonical NA NA 260 None 5 25 0 FALSE 0 0 NA A coding 96 288 61 348 PB.6771.1 chr12 + 1335 6 full-splice_match TIGAR ENST00000179259.5 2782 6 15 1432 no_subtype FALSE canonical NA NA 433 None 2 4 0 FALSE 0 0 NA A coding 270 810 53 862 PB.2454.1 chr3 - 1742 11 full-splice_match RUVBL1 ENST00000322623.9 1761 11 12 7 no_subtype FALSE canonical NA NA 229 None 23 3 0 FALSE 0 0 NA A coding 456 1368 89 1456 PB.8617.1 chr16 + 1850 14 full-splice_match LPCAT2 ENST00000262134.9 5391 14 104 3437 no_subtype TRUE canonical NA NA 1530 None 14 0 0 FALSE 0 0 NA A coding 544 1632 81 1712 PB.11202.1 chrX + 1419 2 full-splice_match TMEM187 ENST00000369982.4 1880 2 455 6 no_subtype FALSE canonical NA NA 79 None 3 6 0 FALSE 0 0 NA A coding 261 783 293 1075 PB.5436.3 chr9 - 3680 5 full-splice_match LPAR1 ENST00000374431.7 3637 5 -42 -1 no_subtype FALSE canonical NA NA 245 None 2 8 0 FALSE 0 0 NA C coding 364 1092 427 1518 PB.5436.2 chr9 - 3772 5 novel_not_in_catalog LPAR1 novel NA NA NA NA no_subtype FALSE canonical NA NA 335 None 2 9 0 FALSE 0 0 NA C coding 364 1092 517 1608 PB.139.3 chr1 - 2923 7 novel_in_catalog HMGCL novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 65 None 5 10 0 FALSE 0 0 NA C coding 295 885 6 890 PB.139.2 chr1 - 1679 10 novel_not_in_catalog HMGCL novel NA NA NA NA no_subtype FALSE non_canonical NA NA 70 None 10 7 1 TRUE 0 0 NA C coding 300 900 209 1108 PB.139.1 chr1 - 1579 9 full-splice_match HMGCL ENST00000374490.7 1600 9 15 6 no_subtype FALSE canonical NA NA 89 None 19 2 0 FALSE 0 0 NA C coding 325 975 30 1004 PB.9246.1 chr17 + 1919 7 novel_not_in_catalog PCTP novel NA NA NA NA no_subtype TRUE canonical NA NA 759 None 3 10 1 TRUE 0 0 NA A coding 214 642 67 708 PB.4910.1 chr8 + 2793 1 genic_intron novelGene_472 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 4 6 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.6373.1 chr11 - 2644 1 incomplete-splice_match AHNAK ENST00000378024.8 18787 5 16098 46 no_subtype FALSE canonical NA NA NA None 6 5 0 FALSE 0 0 NA C coding 597 1791 58 1848 PB.6977.3 chr12 + 1505 3 novel_not_in_catalog DAZAP2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 861 None 3 4 0 TRUE 0 0 NA C non_coding NA NA NA NA PB.9691.4 chr19 - 1783 8 full-splice_match PLIN3 ENST00000585479.5 1535 8 59 -307 no_subtype FALSE canonical NA NA 27 None 2 10 0 FALSE 0 0 NA C coding 433 1299 45 1343 PB.5595.2 chr9 - 3345 2 novel_not_in_catalog TSC1 novel NA NA NA NA no_subtype FALSE canonical NA NA 163 None 2 21 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.5595.1 chr9 - 3357 1 incomplete-splice_match TSC1 ENST00000545250.5 8310 20 4951 3 no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.2832.1 chr4 + 3710 3 antisense novelGene_CNGA1_AS novel NA NA NA NA no_subtype TRUE canonical NA NA 2256 None 2 27 2 FALSE 0 0 NA A coding 118 354 564 917 PB.9691.1 chr19 - 1779 11 novel_not_in_catalog PLIN3 novel NA NA NA NA no_subtype TRUE canonical NA NA 27 None 6 7 1 TRUE 0 0 NA C coding 434 1302 45 1346 PB.9691.2 chr19 - 3702 3 novel_not_in_catalog TICAM1 novel NA NA NA NA no_subtype FALSE canonical NA NA 90 None 3 25 1 TRUE 0 0 NA C coding 712 2136 230 2365 PB.9691.3 chr19 - 2649 2 full-splice_match TICAM1 ENST00000248244.5 2676 2 11 16 no_subtype FALSE canonical NA NA 80 None 19 7 0 FALSE 0 0 NA C coding 712 2136 220 2355 PB.1392.5 chr2 + 3608 2 genic_intron novelGene_647 novel NA NA NA NA no_subtype FALSE canonical NA NA 2325 None 6 12 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.10146.1 chr19 - 2468 8 novel_not_in_catalog ZNF350 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 57 None 2 8 1 TRUE 0 0 NA A coding 532 1596 650 2245 PB.1477.1 chr2 + 3727 25 novel_not_in_catalog PROM2 novel NA NA NA NA no_subtype FALSE canonical NA NA 3012 None 7 5 2 TRUE 0 0 NA B coding 834 2502 139 2640 PB.6504.1 chr11 - 2599 9 full-splice_match DHCR7 ENST00000407721.6 2601 9 -3 5 no_subtype TRUE canonical NA NA 84 None 10 8 1 FALSE 0 0 NA A coding 475 1425 216 1640 PB.4535.2 chr7 + 1444 5 novel_in_catalog ZNF655 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 604 None 3 0 0 FALSE 0 0 NA C coding 181 543 256 798 PB.9071.1 chr17 - 1040 4 novel_not_in_catalog CCL5 novel NA NA NA NA no_subtype TRUE canonical NA NA 141 None 34 9 0 TRUE 0 0 NA A coding 91 273 66 338 PB.5800.1 chr10 - 2719 2 full-splice_match EGR2 ENST00000242480.3 2968 2 175 74 no_subtype FALSE canonical NA NA 320 None 29 12 0 FALSE 0 0 NA A coding 475 1425 155 1579 PB.1747.1 chr2 + 1639 2 novel_not_in_catalog PMS1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1592 None 2 18 1 TRUE 0 0 NA B non_coding NA NA NA NA PB.1747.2 chr2 + 3127 15 novel_not_in_catalog PMS1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2779 None 4 4 0 TRUE 0 0 NA B coding 932 2796 146 2941 PB.1460.1 chr2 + 4654 26 full-splice_match KDM3A ENST00000312912.9 4886 26 232 0 no_subtype TRUE canonical NA NA 3980 None 2 7 1 FALSE 0 0 NA A coding 1321 3963 96 4058 PB.9222.2 chr17 - 1686 8 novel_in_catalog SPOP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 51 None 2 9 0 FALSE 0 0 NA C coding 281 843 118 960 PB.786.1 chr1 + 1188 1 full-splice_match SUMO1P3 ENST00000439961.2 304 1 -117 -767 no_subtype FALSE canonical NA NA NA None 9 3 0 FALSE 0 0 NA A coding 101 303 116 418 PB.105.1 chr1 - 847 5 full-splice_match PLA2G2A ENST00000400520.7 974 5 125 2 no_subtype FALSE canonical NA NA 39 None 28 1 0 FALSE 0 0 NA A coding 144 432 146 577 PB.8504.1 chr16 - 3275 22 full-splice_match ERN2 ENST00000256797.8 3549 22 274 0 no_subtype TRUE canonical NA NA 132 None 20 4 1 FALSE 0 0 NA A coding 926 2778 40 2817 PB.8683.1 chr16 + 864 5 full-splice_match NUTF2 ENST00000219169.8 2321 5 201 1256 no_subtype FALSE canonical NA NA 352 None 5 1 0 FALSE 0 0 NA A coding 127 381 83 463 PB.3493.1 chr5 + 1645 5 full-splice_match TXNDC15 ENST00000358387.8 3548 5 582 1321 no_subtype FALSE canonical NA NA 929 None 22 2 0 FALSE 0 0 NA C coding 348 1044 80 1123 PB.9363.2 chr17 - 1484 6 novel_not_in_catalog MIF4GD novel NA NA NA NA no_subtype FALSE canonical NA NA 263 None 9 3 0 FALSE 0 0 NA C coding 222 666 314 979 PB.9850.6 chr19 - 2800 24 novel_not_in_catalog EPS15L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 2 2 1 TRUE 0 0 NA C coding 864 2592 18 2609 PB.9363.1 chr17 - 1262 6 full-splice_match MIF4GD ENST00000325102.12 1306 6 39 5 no_subtype FALSE canonical NA NA 36 None 7 3 0 FALSE 0 0 NA C coding 222 666 87 752 PB.5713.2 chr10 + 2604 3 novel_not_in_catalog THNSL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 264 None 2 5 0 FALSE 0 0 NA C coding 743 2229 313 2541 PB.5713.1 chr10 + 2687 3 full-splice_match THNSL1 ENST00000524413.5 3788 3 -43 1144 no_subtype FALSE canonical NA NA 342 None 5 2 0 FALSE 0 0 NA C coding 743 2229 391 2619 PB.488.2 chr1 - 2526 5 full-splice_match FAM69A ENST00000370310.4 2574 5 39 9 no_subtype FALSE canonical NA NA 86 None 8 15 0 FALSE 0 0 NA C coding 428 1284 33 1316 PB.7806.1 chr14 + 2875 10 novel_not_in_catalog PTGR2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1514 None 2 20 0 TRUE 0 0 NA A coding 351 1053 536 1588 PB.7770.2 chr14 - 1393 10 novel_not_in_catalog ATP6V1D novel NA NA NA NA no_subtype FALSE canonical NA NA 149 None 33 3 0 TRUE 0 0 NA B coding 247 741 109 849 PB.7770.3 chr14 - 1560 9 full-splice_match PLEK2 ENST00000216446.8 1549 9 -13 2 no_subtype FALSE canonical NA NA 196 None 2 3 0 FALSE 0 0 NA C coding 353 1059 155 1213 PB.651.1 chr1 - 1689 7 full-splice_match APH1A ENST00000369109.7 1713 7 20 4 no_subtype FALSE canonical NA NA 282 None 2 5 0 FALSE 0 0 NA C coding 265 795 170 964 PB.2905.11 chr4 - 2861 3 novel_in_catalog ANTXR2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 821 None 2 13 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.7820.1 chr14 - 3581 12 novel_not_in_catalog MLH3 novel NA NA NA NA no_subtype FALSE canonical NA NA 2315 None 2 6 0 TRUE 0 0 NA A coding 1075 3225 71 3295 PB.5460.14 chr9 - 5544 24 fusion RP11-9M16.2,AKNA novel NA NA NA NA no_subtype FALSE non_canonical NA NA 25 None 2 14 2 TRUE 0 0 NA B coding 1439 4317 303 4619 PB.1392.3 chr2 + 2892 12 novel_not_in_catalog ARHGAP25 novel NA NA NA NA no_subtype TRUE canonical NA NA 2056 None 2 8 1 TRUE 0 0 NA B coding 620 1860 402 2261 PB.8177.3 chr15 - 2455 10 novel_not_in_catalog AAGAB novel NA NA NA NA no_subtype FALSE canonical NA NA 434 None 4 6 0 FALSE 0 0 NA C coding 206 618 689 1306 PB.8935.3 chr17 - 3993 2 genic_intron novelGene_113 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3854 None 2 17 1 FALSE 0 0 NA A coding 149 447 1057 1503 PB.496.2 chr1 - 2068 8 full-splice_match BCAR3 ENST00000539242.5 2114 8 -5 51 no_subtype FALSE canonical NA NA 116 None 4 2 0 FALSE 0 0 NA C coding 501 1503 160 1662 PB.9850.5 chr19 - 2928 23 novel_not_in_catalog EPS15L1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 50 None 2 21 2 TRUE 0 0 NA C coding 908 2724 18 2741 PB.9079.2 chr17 + 1493 3 novel_not_in_catalog DUSP14 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 183 None 2 7 0 FALSE 0 0 NA A coding 198 594 276 869 PB.1537.1 chr2 + 3186 2 novel_in_catalog RANBP2 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2687 None 2 23 0 FALSE 0 0 NA A coding 180 540 2451 2990 PB.3441.1 chr5 - 2619 2 full-splice_match CEP120 ENST00000503049.1 579 2 -651 -1389 no_subtype FALSE canonical NA NA 801 None 2 16 0 FALSE 0 0 NA A coding 149 447 619 1065 PB.1065.2 chr1 + 3748 13 novel_in_catalog BROX novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1190 None 29 18 0 FALSE 0 0 NA C coding 411 1233 42 1274 PB.10591.1 chr21 + 1808 1 genic AGPAT3 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 5 13 0 FALSE 0 0 NA A coding 127 381 475 855 PB.3146.11 chr4 - 3627 20 novel_not_in_catalog ACSL1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 53 None 2 2 0 TRUE 0 0 NA C coding 365 1095 1012 2106 PB.2828.2 chr4 - 2732 3 novel_not_in_catalog COMMD8 novel NA NA NA NA no_subtype TRUE canonical NA NA 1510 None 3 26 0 TRUE 0 0 NA C coding 106 318 2 319 PB.2828.1 chr4 - 1335 5 full-splice_match COMMD8 ENST00000381571.5 1469 5 60 74 no_subtype FALSE canonical NA NA 74 None 6 5 0 FALSE 0 0 NA C coding 183 549 9 557 PB.10230.2 chr20 + 5996 3 genic_intron novelGene_17 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2265 None 2 50 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.9880.1 chr19 - 1038 5 full-splice_match LSM4 ENST00000593829.5 1908 5 157 713 no_subtype FALSE canonical NA NA 100 None 13 4 0 FALSE 0 0 NA A coding 139 417 98 514 PB.496.1 chr1 - 3094 12 full-splice_match BCAR3 ENST00000260502.10 3171 12 73 4 no_subtype FALSE canonical NA NA 159 None 11 3 0 FALSE 0 0 NA C coding 825 2475 171 2645 PB.10230.1 chr20 + 5556 5 novel_not_in_catalog STK35 novel NA NA NA NA no_subtype TRUE canonical NA NA 812 None 2 34 0 TRUE 0 0 NA A coding 257 771 2 772 PB.9850.4 chr19 - 3092 25 novel_not_in_catalog EPS15L1 novel NA NA NA NA no_subtype FALSE canonical NA NA 47 None 6 5 1 TRUE 0 0 NA C coding 829 2487 15 2501 PB.480.5 chr1 - 4255 17 full-splice_match TGFBR3 ENST00000465892.6 2908 17 -50 -1297 no_subtype FALSE canonical NA NA 282 None 19 10 0 FALSE 0 0 NA A coding 850 2550 396 2945 PB.946.53 chr1 + 2569 14 novel_not_in_catalog PTPRC novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2059 None 2 9 1 TRUE 0 0 NA B coding 568 1704 63 1766 PB.5911.1 chr10 - 1460 1 full-splice_match SRP9P1 ENST00000445874.1 261 1 -94 -1105 no_subtype FALSE canonical NA NA NA None 12 12 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.2808.1 chr4 - 4017 25 full-splice_match RFC1 ENST00000349703.6 4859 25 -7 849 no_subtype FALSE canonical NA NA 120 None 2 9 1 FALSE 0 0 NA A coding 1147 3441 118 3558 PB.7281.1 chr12 + 2548 12 full-splice_match PLBD2 ENST00000280800.4 4800 12 20 2232 no_subtype FALSE canonical NA NA 1613 None 9 9 0 FALSE 0 0 NA A coding 589 1767 12 1778 PB.3485.1 chr5 + 1467 1 novel_in_catalog AC005355.2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA A coding 101 303 298 600 PB.1060.1 chr1 + 2854 2 full-splice_match C1orf115 ENST00000294889.5 3413 2 538 21 no_subtype FALSE canonical NA NA 329 None 4 13 0 FALSE 0 0 NA A coding 142 426 21 446 PB.10220.1 chr20 - 1587 1 antisense novelGene_FAM110A_AS novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 6 3 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5422.1 chr9 - 2813 3 genic_intron novelGene_956 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2582 None 3 19 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.2674.6 chr3 + 3367 5 novel_in_catalog OPA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2165 None 2 13 0 FALSE 0 0 NA B coding 155 465 149 613 PB.2099.2 chr3 - 1646 11 novel_in_catalog ACAA1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 255 None 3 2 1 FALSE 0 0 NA C coding 256 768 546 1313 PB.2099.1 chr3 - 1702 12 full-splice_match ACAA1 ENST00000333167.12 1785 12 71 12 no_subtype FALSE canonical NA NA 273 None 36 2 0 FALSE 0 0 NA C coding 424 1272 103 1374 PB.2674.5 chr3 + 3260 32 novel_not_in_catalog OPA1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 3139 None 2 10 3 TRUE 0 0 NA B coding 694 2082 1046 3127 PB.2674.2 chr3 + 3177 29 novel_not_in_catalog OPA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3062 None 2 1 1 FALSE 0 0 NA B coding 960 2880 171 3050 PB.2674.3 chr3 + 3270 30 novel_not_in_catalog OPA1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3152 None 11 1 1 FALSE 0 0 NA B coding 997 2991 150 3140 PB.9850.3 chr19 - 2881 22 novel_in_catalog EPS15L1 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 72 None 17 5 0 FALSE 0 0 NA C coding 797 2391 40 2430 PB.6841.1 chr12 + 2743 5 full-splice_match EMP1 ENST00000256951.9 5921 5 10 3168 no_subtype FALSE canonical NA NA 505 None 65 11 1 FALSE 0 0 NA C coding 157 471 190 660 PB.8706.1 chr16 + 2926 3 novel_not_in_catalog SNTB2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1454 None 2 24 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.7959.178 chr14 - 1531 9 fusion IGHG1,IGHV3-21,IGHG3 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 125 None 3 12 4 TRUE 0 0 NA A coding 196 588 809 1396 PB.8270.1 chr15 + 3852 23 novel_not_in_catalog PDE8A novel NA NA NA NA no_subtype FALSE canonical NA NA 2514 None 2 10 0 TRUE 0 0 NA A coding 829 2487 132 2618 PB.695.6 chr1 - 2928 13 incomplete-splice_match DENND4B ENST00000361217.8 5706 28 2776 2 5prime_fragment FALSE canonical NA NA 82 None 2 5 0 FALSE 0 0 NA B coding 694 2082 50 2131 PB.6486.1 chr11 + 1536 10 full-splice_match NDUFV1 ENST00000322776.10 1596 10 88 -28 no_subtype TRUE canonical NA NA 1373 None 95 0 0 FALSE 0 0 NA A coding 464 1392 66 1457 PB.7396.3 chr13 - 3691 21 incomplete-splice_match PARP4 ENST00000381989.3 5474 34 1777 6 5prime_fragment FALSE canonical NA NA 118 None 2 4 0 FALSE 0 0 NA C coding 1167 3501 1 3501 PB.7396.4 chr13 - 5372 34 full-splice_match PARP4 ENST00000381989.3 5474 34 16 86 no_subtype FALSE canonical NA NA 89 None 32 7 1 FALSE 0 0 NA C coding 1724 5172 91 5262 PB.7396.5 chr13 - 3147 21 novel_in_catalog PARP4 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 50 None 2 8 1 FALSE 0 0 NA C coding 866 2598 52 2649 PB.7396.6 chr13 - 2611 21 novel_not_in_catalog PARP4 novel NA NA NA NA no_subtype FALSE canonical NA NA 50 None 3 5 2 FALSE 0 0 NA C coding 841 2523 52 2574 PB.1.1 chr1 - 2762 20 novel_not_in_catalog NOC2L novel NA NA NA NA no_subtype FALSE non_canonical NA NA 33 None 2 14 1 TRUE 0 0 NA C coding 749 2247 8 2254 PB.6605.2 chr11 + 3237 1 novel_in_catalog JRKL novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 2 17 0 FALSE 0 0 NA C coding 524 1572 636 2207 PB.1.3 chr1 - 2736 19 full-splice_match NOC2L ENST00000327044.6 2790 19 43 11 no_subtype FALSE canonical NA NA 33 None 46 12 0 FALSE 0 0 NA C coding 749 2247 8 2254 PB.1.2 chr1 - 2780 19 novel_in_catalog NOC2L novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 62 None 71 11 0 FALSE 0 0 NA C coding 754 2262 37 2298 PB.9888.1 chr19 + 2507 14 full-splice_match CRTC1 ENST00000321949.12 2501 14 -7 1 no_subtype FALSE canonical NA NA 1726 None 2 1 0 FALSE 0 0 NA A coding 634 1902 34 1935 PB.4254.1 chr6 + 2438 1 full-splice_match C6orf120 ENST00000332290.3 2667 1 229 0 no_subtype FALSE canonical NA NA NA None 36 24 0 FALSE 0 0 NA A coding 191 573 42 614 PB.6705.1 chr11 - 2892 3 novel_not_in_catalog MIR100HG novel NA NA NA NA no_subtype FALSE non_canonical NA NA 284 None 14 13 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.3376.1 chr5 + 3182 3 antisense novelGene_FAM172A_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 3140 None 2 32 2 FALSE 0 0 NA A non_coding NA NA NA NA PB.2733.1 chr4 - 1549 2 full-splice_match MRFAP1L1 ENST00000320848.6 1593 2 40 4 no_subtype FALSE canonical NA NA 610 None 3 3 0 FALSE 0 0 NA C coding 127 381 212 592 PB.2733.2 chr4 - 2097 1 full-splice_match MRFAP1L1 ENST00000500563.2 2127 1 -13 43 no_subtype FALSE canonical NA NA NA None 4 8 0 FALSE 0 0 NA C coding 127 381 212 592 PB.3093.3 chr4 - 1798 7 full-splice_match TMEM154 ENST00000304385.7 10698 7 194 8706 no_subtype FALSE canonical NA NA 102 None 224 3 0 FALSE 0 0 NA C coding 183 549 39 587 PB.9769.12 chr19 + 5779 8 novel_not_in_catalog DNM2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 4856 None 3 20 0 TRUE 0 0 NA C coding 461 1383 3541 4923 PB.9769.13 chr19 + 5891 2 novel_not_in_catalog DNM2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 5866 None 2 31 0 TRUE 0 0 NA C coding 183 549 4002 4550 PB.10580.3 chr21 + 2950 22 novel_not_in_catalog SLC37A1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1877 None 2 8 0 TRUE 0 0 NA B coding 533 1599 292 1890 PB.647.1 chr1 - 3159 1 incomplete-splice_match OTUD7B ENST00000581312.5 8872 12 3190 2524 no_subtype FALSE canonical NA NA NA None 2 26 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.5240.3 chr9 - 1612 8 novel_not_in_catalog HACD4 novel NA NA NA NA no_subtype FALSE canonical NA NA 223 None 2 6 1 TRUE 0 0 NA B coding 225 675 936 1610 PB.8732.3 chr16 + 3769 10 novel_not_in_catalog IST1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2380 None 3 20 0 FALSE 0 0 NA B coding 287 861 92 952 PB.8732.2 chr16 + 3113 10 novel_not_in_catalog IST1 novel NA NA NA NA no_subtype TRUE canonical NA NA 1725 None 4 16 0 FALSE 0 0 NA B coding 298 894 1029 1922 PB.8732.1 chr16 + 2325 11 novel_not_in_catalog IST1 novel NA NA NA NA no_subtype FALSE canonical NA NA 937 None 16 11 0 FALSE 0 0 NA B coding 366 1098 37 1134 PB.3093.1 chr4 - 4101 8 novel_not_in_catalog TMEM154 novel NA NA NA NA no_subtype FALSE canonical NA NA 128 None 5 22 1 TRUE 0 0 NA C coding 183 549 65 613 PB.5357.1 chr9 - 3369 2 genic_intron novelGene_795 novel NA NA NA NA no_subtype FALSE canonical NA NA 3087 None 2 28 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9182.5 chr17 - 5594 1 genic_intron novelGene_447 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 21 0 FALSE 0 0 NA A coding 100 300 1632 1931 PB.4825.1 chr8 + 4596 9 full-splice_match SLC39A14 ENST00000359741.9 4641 9 31 14 no_subtype FALSE canonical NA NA 1476 None 2 17 0 FALSE 0 0 NA C coding 492 1476 145 1620 PB.4825.2 chr8 + 4592 9 full-splice_match SLC39A14 ENST00000381237.5 4641 9 -22 71 no_subtype FALSE canonical NA NA 1473 None 7 17 0 FALSE 0 0 NA C coding 492 1476 142 1617 PB.4825.3 chr8 + 1450 1 incomplete-splice_match SLC39A14 ENST00000359741.9 4641 9 3177 15 no_subtype FALSE canonical NA NA NA None 2 8 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.7338.1 chr12 - 1310 6 full-splice_match DIABLO ENST00000267169.10 1316 6 11 -5 no_subtype FALSE canonical NA NA 77 None 2 5 0 FALSE 0 0 NA C coding 186 558 158 715 PB.7338.2 chr12 - 1333 6 incomplete-splice_match DIABLO ENST00000443649.7 2250 7 793 124 5prime_fragment FALSE canonical NA NA 75 None 4 5 0 FALSE 0 0 NA C coding 239 717 26 742 PB.5614.1 chr9 + 2751 4 incomplete-splice_match COL5A1 ENST00000371817.7 8471 66 5418 302 internal_fragment FALSE canonical NA NA 366 None 3 15 0 FALSE 0 0 NA A coding 111 333 178 510 PB.1854.2 chr2 + 1443 11 novel_not_in_catalog ARPC2 novel NA NA NA NA no_subtype FALSE canonical NA NA 988 None 14 1 0 TRUE 0 0 NA C coding 300 900 111 1010 PB.6802.1 chr12 - 867 4 full-splice_match RBP5 ENST00000266560.7 1012 4 51 94 no_subtype FALSE canonical NA NA 189 None 6 2 0 FALSE 0 0 NA A coding 135 405 117 521 PB.3195.1 chr5 - 3428 21 novel_not_in_catalog ZFR novel NA NA NA NA no_subtype TRUE canonical NA NA 59 None 7 2 0 TRUE 0 0 NA C coding 1074 3222 23 3244 PB.1854.6 chr2 + 3036 4 novel_not_in_catalog ARPC2 novel NA NA NA NA no_subtype TRUE canonical NA NA 2955 None 2 18 1 TRUE 0 0 NA C non_coding NA NA NA NA PB.3195.3 chr5 - 3369 20 full-splice_match ZFR ENST00000265069.12 4738 20 48 1321 no_subtype TRUE canonical NA NA 92 None 46 0 0 FALSE 0 0 NA C coding 1074 3222 56 3277 PB.4052.1 chr6 + 6828 20 full-splice_match AIM1 ENST00000369066.7 7553 20 716 9 no_subtype FALSE canonical NA NA 4848 None 4 14 0 FALSE 0 0 NA C coding 1406 4218 723 4940 PB.1907.9 chr2 + 1587 16 novel_not_in_catalog SP100 novel NA NA NA NA no_subtype FALSE canonical NA NA 1532 None 62 1 0 FALSE 0 0 NA B coding 506 1518 68 1585 PB.2511.3 chr3 + 3315 27 novel_in_catalog U2SURP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2800 None 2 4 0 FALSE 0 0 NA B coding 970 2910 27 2936 PB.7206.6 chr12 + 5993 3 genic_intron novelGene_947 novel NA NA NA NA no_subtype FALSE canonical NA NA 4286 None 3 26 1 FALSE 0 0 NA B coding 135 405 5316 5720 PB.9159.1 chr17 - 1528 4 full-splice_match TMEM101 ENST00000206380.7 1536 4 2 6 no_subtype FALSE canonical NA NA 160 None 21 7 0 FALSE 0 0 NA A coding 247 741 54 794 PB.7710.1 chr14 - 3321 15 full-splice_match FERMT2 ENST00000341590.7 3338 15 9 8 no_subtype FALSE canonical NA NA 168 None 16 6 0 FALSE 0 0 NA A coding 680 2040 178 2217 PB.9379.1 chr17 - 3158 17 incomplete-splice_match FBF1 ENST00000319129.10 4156 25 996 2 5prime_fragment FALSE canonical NA NA 258 None 5 8 0 FALSE 0 0 NA A coding 444 1332 947 2278 PB.9579.4 chr18 + 1616 1 full-splice_match RP11-845C23.2 ENST00000587933.1 1101 1 -359 -156 no_subtype FALSE canonical NA NA NA None 2 15 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.3368.3 chr5 - 2693 5 novel_not_in_catalog TMEM161B novel NA NA NA NA no_subtype TRUE canonical NA NA 108 None 10 11 0 TRUE 0 0 NA B coding 120 360 106 465 PB.8687.2 chr16 - 3788 24 full-splice_match SLC12A4 ENST00000316341.7 4765 24 115 862 no_subtype FALSE canonical NA NA 141 None 55 1 0 FALSE 0 0 NA A coding 1085 3255 27 3281 PB.3368.1 chr5 - 2736 3 novel_not_in_catalog TMEM161B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 258 None 12 16 0 TRUE 0 0 NA B coding 104 312 2325 2636 PB.6829.1 chr12 - 3538 1 genic_intron novelGene_94 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 2 24 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.1650.1 chr2 + 1612 4 full-splice_match ARL6IP6 ENST00000326446.9 2805 4 706 487 no_subtype FALSE canonical NA NA 592 None 26 5 0 FALSE 0 0 NA A coding 226 678 6 683 PB.2085.1 chr3 + 1929 7 full-splice_match CRTAP ENST00000320954.10 6630 7 83 4618 no_subtype FALSE canonical NA NA 1168 None 16 2 0 FALSE 0 0 NA A coding 401 1203 17 1219 PB.137.1 chr1 + 1587 10 full-splice_match LYPLA2 ENST00000374514.7 1810 10 219 4 no_subtype FALSE canonical NA NA 733 None 101 4 0 FALSE 0 0 NA A coding 226 678 104 781 PB.9506.2 chr18 - 2029 9 full-splice_match ABHD3 ENST00000289119.6 2064 9 22 13 no_subtype FALSE canonical NA NA 280 None 5 10 0 FALSE 0 0 NA C coding 409 1227 119 1345 PB.9506.1 chr18 - 1826 7 novel_not_in_catalog ABHD3 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 232 None 6 13 1 TRUE 0 0 NA C coding 356 1068 71 1138 PB.689.5 chr1 + 2858 5 novel_in_catalog CHTOP novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 2457 None 18 9 0 FALSE 0 0 NA C coding 223 669 1992 2660 PB.689.4 chr1 + 2573 6 novel_not_in_catalog CHTOP novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2175 None 2 14 1 FALSE 0 0 NA C coding 224 672 1707 2378 PB.1948.1 chr2 + 1647 6 novel_in_catalog ASB1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1189 None 2 5 0 FALSE 0 0 NA B coding 335 1005 38 1042 PB.5558.2 chr9 + 3751 18 novel_not_in_catalog FAM73B novel NA NA NA NA no_subtype TRUE canonical NA NA 3487 None 2 19 0 TRUE 0 0 NA B coding 353 1059 195 1253 PB.1733.1 chr2 - 1881 6 full-splice_match FRZB ENST00000295113.4 3162 6 544 737 no_subtype FALSE canonical NA NA 544 None 34 3 0 FALSE 0 0 NA A coding 325 975 67 1041 PB.8151.1 chr15 + 3625 7 novel_not_in_catalog PLEKHO2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2101 None 130 10 1 TRUE 0 0 NA A coding 490 1470 59 1528 PB.2717.6 chr4 + 3949 16 novel_not_in_catalog ADD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 2047 None 21 26 1 TRUE 0 0 NA B coding 768 2304 94 2397 PB.2717.7 chr4 + 3658 14 novel_not_in_catalog ADD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1769 None 5 16 0 TRUE 0 0 NA B coding 673 2019 101 2119 PB.2717.4 chr4 + 3255 18 novel_not_in_catalog ADD1 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 2836 None 2 24 0 TRUE 0 0 NA B coding 768 2304 141 2444 PB.2717.5 chr4 + 2873 10 novel_in_catalog ADD1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 1248 None 5 13 0 FALSE 0 0 NA B coding 511 1533 88 1620 PB.2013.5 chr3 - 6634 38 novel_not_in_catalog NUP210 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 57 None 3 9 1 TRUE 0 0 NA B coding 1360 4080 1110 5189 PB.2013.4 chr3 - 7176 41 novel_not_in_catalog NUP210 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 233 None 12 10 1 TRUE 0 0 NA B coding 1360 4080 1652 5731 PB.3348.3 chr5 - 2430 8 novel_not_in_catalog SERINC5 novel NA NA NA NA no_subtype FALSE canonical NA NA 150 None 2 21 0 TRUE 0 0 NA B coding 291 873 124 996 PB.2717.1 chr4 + 3850 16 novel_not_in_catalog ADD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 1948 None 284 16 0 TRUE 0 0 NA B coding 737 2211 88 2298 PB.3644.2 chr5 - 3458 12 full-splice_match FBXW11 ENST00000393802.6 2181 12 9 -1286 no_subtype FALSE canonical NA NA 184 None 14 7 1 FALSE 0 0 NA C coding 508 1524 140 1663 PB.8610.2 chr16 + 1957 3 incomplete-splice_match CHD9 ENST00000615216.4 10603 38 -14 8660 3prime_fragment FALSE canonical NA NA 1675 None 3 2 1 FALSE 0 0 NA B coding 578 1734 224 1957 PB.5122.2 chr8 + 2891 2 genic_intron novelGene_1118 novel NA NA NA NA no_subtype FALSE canonical NA NA 2040 None 3 20 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.5558.1 chr9 + 3514 18 novel_not_in_catalog FAM73B novel NA NA NA NA no_subtype FALSE non_canonical NA NA 3265 None 28 18 1 TRUE 0 0 NA B coding 271 813 185 997 PB.278.1 chr1 - 1515 7 full-splice_match RRAGC ENST00000373001.3 2732 7 65 1152 no_subtype FALSE canonical NA NA 349 None 2 4 0 FALSE 0 0 NA A coding 399 1197 113 1309 PB.6711.1 chr11 - 2970 8 novel_in_catalog ZNF202 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 40 None 2 2 0 FALSE 0 0 NA A coding 648 1944 258 2201 PB.2717.8 chr4 + 3641 14 novel_not_in_catalog ADD1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1756 None 3 18 1 TRUE 0 0 NA B coding 492 1476 86 1561 PB.2717.9 chr4 + 5779 16 novel_not_in_catalog ADD1 novel NA NA NA NA no_subtype FALSE canonical NA NA 3887 None 2 44 1 TRUE 0 0 NA B coding 737 2211 2027 4237 PB.5816.1 chr10 + 1711 8 full-splice_match TSPAN15 ENST00000373290.6 1698 8 -18 5 no_subtype FALSE canonical NA NA 875 None 23 7 0 FALSE 0 0 NA C coding 294 882 141 1022 PB.1875.1 chr2 + 2965 9 full-splice_match DNAJB2 ENST00000336576.9 3176 9 202 9 no_subtype FALSE canonical NA NA 705 None 2 7 1 FALSE 0 0 NA C coding 324 972 87 1058 PB.5816.2 chr10 + 3093 8 novel_not_in_catalog TSPAN15 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2256 None 7 16 2 TRUE 0 0 NA C coding 150 450 1954 2403 PB.8762.1 chr16 + 1753 11 full-splice_match CENPN ENST00000305850.9 2481 11 727 1 no_subtype FALSE canonical NA NA 1000 None 2 4 0 FALSE 0 0 NA A coding 339 1017 64 1080 PB.3822.1 chr6 - 4084 30 full-splice_match VARS ENST00000375663.7 4312 30 221 7 no_subtype TRUE canonical NA NA 187 None 55 1 0 FALSE 0 0 NA A coding 1264 3792 221 4012 PB.7656.1 chr14 - 1614 6 novel_not_in_catalog EAPP novel NA NA NA NA no_subtype FALSE canonical NA NA 461 None 2 10 1 FALSE 0 0 NA C coding 221 663 580 1242 PB.6345.2 chr11 - 4205 20 novel_not_in_catalog PATL1 novel NA NA NA NA no_subtype FALSE canonical NA NA 168 None 2 10 0 FALSE 0 0 NA C coding 539 1617 921 2537 PB.9710.2 chr19 - 2572 24 novel_not_in_catalog DENND1C novel NA NA NA NA no_subtype FALSE canonical NA NA 109 None 2 1 0 TRUE 0 0 NA A coding 801 2403 93 2495 PB.7656.2 chr14 - 1206 6 full-splice_match EAPP ENST00000250454.7 1321 6 22 93 no_subtype FALSE canonical NA NA 134 None 2 5 0 FALSE 0 0 NA C coding 285 855 61 915 PB.4891.1 chr8 + 922 6 full-splice_match GOLGA7 ENST00000520817.5 1984 6 107 955 no_subtype TRUE canonical NA NA 480 None 32 1 0 FALSE 0 0 NA C coding 137 411 52 462 PB.8522.24 chr16 - 2778 1 genic_intron novelGene_276 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 18 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10507.1 chr21 + 741 1 full-splice_match PPIAP22 ENST00000358455.4 498 1 -44 -199 no_subtype FALSE canonical NA NA NA None 2 1 0 FALSE 0 0 NA A coding 165 495 45 539 PB.4891.2 chr8 + 1386 1 incomplete-splice_match GOLGA7 ENST00000520817.5 1984 6 595 4 no_subtype FALSE canonical NA NA NA None 2 9 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.8130.3 chr15 + 2921 1 novel_in_catalog TPM1 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 29 8 0 FALSE 0 0 NA C coding 96 288 84 371 PB.8130.2 chr15 + 1664 9 full-splice_match TPM1 ENST00000358278.7 1717 9 66 -13 no_subtype FALSE canonical NA NA 851 None 39 5 0 FALSE 0 0 NA C coding 284 852 80 931 PB.8130.1 chr15 + 1671 9 full-splice_match TPM1 ENST00000267996.11 1670 9 -6 5 no_subtype FALSE canonical NA NA 850 None 205 5 0 FALSE 0 0 NA C coding 284 852 79 930 PB.6379.1 chr11 - 2907 21 incomplete-splice_match EML3 ENST00000394773.6 3256 22 347 2 5prime_fragment FALSE canonical NA NA 155 None 2 2 0 FALSE 0 0 NA A coding 867 2601 49 2649 PB.3587.15 chr5 - 2778 19 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 76 None 2 4 0 TRUE 0 0 NA B coding 636 1908 113 2020 PB.8130.5 chr15 + 1495 8 full-splice_match TPM1 ENST00000404484.8 1568 8 99 -26 no_subtype FALSE canonical NA NA 674 None 69 5 0 FALSE 0 0 NA C coding 248 744 11 754 PB.8130.4 chr15 + 3175 8 novel_in_catalog TPM1 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 785 None 6 11 0 FALSE 0 0 NA C coding 311 933 84 1016 PB.9391.1 chr17 - 3488 2 novel_not_in_catalog MXRA7 novel NA NA NA NA no_subtype FALSE canonical NA NA 1340 None 2 31 1 TRUE 0 0 NA A coding 141 423 1795 2217 PB.5626.3 chr9 + 1268 9 full-splice_match EGFL7 ENST00000371698.3 1282 9 9 5 no_subtype FALSE canonical NA NA 858 None 3 5 0 FALSE 0 0 NA C coding 273 819 60 878 PB.5626.1 chr9 + 1517 10 novel_in_catalog EGFL7 novel NA NA NA NA no_combination_of_known_junctions FALSE canonical NA NA 1107 None 8 12 0 FALSE 0 0 NA C coding 273 819 309 1127 PB.1822.1 chr2 + 1514 2 novel_not_in_catalog ADAM23 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 135 None 2 5 1 TRUE 0 0 NA A non_coding NA NA NA NA PB.4597.5 chr7 - 3053 2 genic_intron novelGene_963 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 248 None 7 21 1 FALSE 0 0 NA B non_coding NA NA NA NA PB.9730.1 chr19 - 1842 13 full-splice_match TIMM44 ENST00000270538.7 2075 13 251 -18 no_subtype TRUE canonical NA NA 63 None 5 4 0 FALSE 0 0 NA A coding 452 1356 19 1374 PB.3473.1 chr5 - 1921 4 full-splice_match ZCCHC10 ENST00000324170.7 2178 4 60 197 no_subtype FALSE canonical NA NA 48 None 6 7 0 FALSE 0 0 NA A coding 170 510 8 517 PB.9145.5 chr17 - 1412 1 full-splice_match MIR6781 ENST00000621616.1 64 1 -331 -1017 no_subtype FALSE canonical NA NA NA None 3 9 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.685.1 chr1 - 554 3 full-splice_match S100A11 ENST00000271638.2 594 3 35 5 no_subtype FALSE canonical NA NA 88 None 18 2 0 FALSE 0 0 NA A coding 105 315 86 400 PB.3818.1 chr6 + 3528 7 novel_not_in_catalog LY6G6F novel NA NA NA NA no_subtype FALSE canonical NA NA 2665 None 2 13 1 TRUE 0 0 NA A coding 297 891 20 910 PB.9145.1 chr17 - 1599 12 full-splice_match BECN1 ENST00000361523.8 2112 12 -6 519 no_subtype FALSE canonical NA NA 137 None 34 1 1 FALSE 0 0 NA C coding 450 1350 140 1489 PB.9145.2 chr17 - 2788 11 novel_in_catalog BECN1 novel NA NA NA NA combination_of_known_junctions TRUE canonical NA NA 138 None 2 11 1 FALSE 0 0 NA C coding 362 1086 1075 2160 PB.9145.3 chr17 - 1591 12 full-splice_match BECN1 ENST00000590099.5 2087 12 -20 516 no_subtype FALSE canonical NA NA 129 None 12 2 1 FALSE 0 0 NA C coding 450 1350 132 1481 PB.10517.2 chr21 + 2887 18 full-splice_match USP16 ENST00000399976.6 2963 18 66 10 no_subtype FALSE canonical NA NA 2474 None 44 4 0 FALSE 0 0 NA A coding 823 2469 125 2593 PB.2627.2 chr3 - 1428 9 full-splice_match ALG3 ENST00000397676.7 1528 9 7 93 no_subtype FALSE canonical NA NA 220 None 31 2 0 FALSE 0 0 NA C coding 438 1314 25 1338 PB.9530.6 chr18 + 3419 3 novel_not_in_catalog MAPRE2 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 1856 None 3 13 1 TRUE 0 0 NA C coding 103 309 1840 2148 PB.7974.1 chr15 + 2390 2 antisense novelGene_MTMR10_AS novel NA NA NA NA no_subtype FALSE canonical NA NA 716 None 3 18 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.9530.1 chr18 + 1510 1 novel_in_catalog MAPRE2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 16 5 0 FALSE 0 0 NA C non_coding NA NA NA NA PB.9530.2 chr18 + 2678 8 novel_not_in_catalog MAPRE2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1006 None 49 4 0 TRUE 0 0 NA C coding 327 981 98 1078 PB.9530.3 chr18 + 2662 7 full-splice_match MAPRE2 ENST00000300249.9 4265 7 88 1515 no_subtype FALSE canonical NA NA 1001 None 71 4 0 FALSE 0 0 NA C coding 327 981 93 1073 PB.8345.1 chr16 + 862 5 full-splice_match NME4 ENST00000219479.6 995 5 21 112 no_subtype FALSE canonical NA NA 433 None 2 6 0 FALSE 0 0 NA A coding 117 351 204 554 PB.1948.2 chr2 + 3346 2 novel_not_in_catalog ASB1 novel NA NA NA NA no_subtype TRUE canonical NA NA 2188 None 2 22 1 TRUE 0 0 NA B coding 100 300 1979 2278 PB.5250.1 chr9 - 3207 11 full-splice_match C9orf72 ENST00000380003.7 3200 11 -16 9 no_subtype FALSE canonical NA NA 36 None 14 9 0 FALSE 0 0 NA A coding 481 1443 81 1523 PB.9602.2 chr18 + 2554 12 novel_not_in_catalog CNDP2 novel NA NA NA NA no_subtype FALSE canonical NA NA 1433 None 27 5 0 TRUE 0 0 NA B coding 475 1425 76 1500 PB.804.3 chr1 - 1857 8 novel_in_catalog B4GALT3 novel NA NA NA NA combination_of_known_junctions FALSE canonical NA NA 84 None 3 1 0 FALSE 0 0 NA C coding 393 1179 174 1352 PB.912.1 chr1 - 1815 16 novel_not_in_catalog NCF2 novel NA NA NA NA no_subtype FALSE canonical NA NA 269 None 18 2 0 TRUE 0 0 NA B coding 526 1578 96 1673 PB.862.2 chr1 + 1923 12 full-splice_match PRRC2C ENST00000476522.5 1931 12 -25 33 no_subtype FALSE canonical NA NA 1506 None 4 1 0 FALSE 0 0 NA C coding 552 1656 268 1923 PB.862.3 chr1 + 5611 1 genic_intron novelGene_1314 novel NA NA NA NA no_subtype FALSE canonical NA NA NA None 3 34 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.862.1 chr1 + 1920 12 incomplete-splice_match PRRC2C ENST00000367742.7 10366 34 27 8419 3prime_fragment FALSE canonical NA NA 1469 None 37 0 0 FALSE 0 0 NA C coding 568 1704 216 1919 PB.8706.2 chr16 + 3101 4 novel_not_in_catalog SNTB2 novel NA NA NA NA no_subtype TRUE non_canonical NA NA 1449 None 2 22 2 TRUE 0 0 NA B non_coding NA NA NA NA PB.862.4 chr1 + 2768 2 genic_intron novelGene_1315 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2470 None 2 28 0 FALSE 0 0 NA A non_coding NA NA NA NA PB.10067.1 chr19 + 2088 13 full-splice_match PPP5C ENST00000012443.8 2109 13 12 9 no_subtype TRUE canonical NA NA 1528 None 3 0 0 FALSE 0 0 NA A coding 497 1491 98 1588 PB.10684.6 chr22 - 1570 5 novel_not_in_catalog XBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 28 None 2 4 0 FALSE 0 0 NA C coding 197 591 365 955 PB.10684.5 chr22 - 1729 5 novel_not_in_catalog XBP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 268 None 3 9 2 TRUE 0 0 NA C coding 197 591 524 1114 PB.10684.4 chr22 - 1587 5 novel_not_in_catalog XBP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 45 None 3 6 0 FALSE 0 0 NA C coding 167 501 101 601 PB.5240.2 chr9 - 4207 8 novel_not_in_catalog HACD4 novel NA NA NA NA no_subtype FALSE canonical NA NA 160 None 9 27 1 TRUE 0 0 NA B coding 232 696 123 818 PB.10684.2 chr22 - 1791 6 novel_not_in_catalog XBP1 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 268 None 6 8 1 FALSE 0 0 NA C coding 378 1134 42 1175 PB.10684.1 chr22 - 1786 5 full-splice_match XBP1 ENST00000216037.10 1850 5 53 11 no_subtype FALSE canonical NA NA 247 None 74 4 0 FALSE 0 0 NA C coding 261 783 21 803 PB.3813.24 chr6 - 3551 25 novel_not_in_catalog BAG6 novel NA NA NA NA no_subtype FALSE canonical NA NA 200 None 6 11 1 FALSE 0 0 NA C coding 1082 3246 214 3459 PB.8359.2 chr16 + 2758 8 novel_not_in_catalog UBE2I novel NA NA NA NA no_subtype FALSE canonical NA NA 2177 None 30 19 1 TRUE 0 0 NA C coding 123 369 222 590 PB.8359.1 chr16 + 1140 7 full-splice_match UBE2I ENST00000397514.7 2976 7 162 1674 no_subtype FALSE canonical NA NA 526 None 14 4 0 FALSE 0 0 NA C coding 158 474 114 587 PB.26.1 chr1 + 2003 1 novel_in_catalog KCNAB2 novel NA NA NA NA monoexon_by_intron_retention/s FALSE canonical NA NA NA None 4 9 0 FALSE 0 0 NA B non_coding NA NA NA NA PB.1832.1 chr2 - 2278 10 full-splice_match IDH1 ENST00000345146.6 2382 10 50 54 no_subtype FALSE canonical NA NA 145 None 13 6 0 FALSE 0 0 NA C coding 414 1242 236 1477 PB.8687.1 chr16 - 6123 28 fusion SLC12A4,LCAT novel NA NA NA NA no_subtype FALSE canonical NA NA 169 None 6 8 0 FALSE 0 0 NA A coding 1085 3255 55 3309 PB.2949.1 chr4 + 3458 4 novel_not_in_catalog HERC3 novel NA NA NA NA no_subtype FALSE canonical NA NA 150 None 3 15 0 TRUE 0 0 NA A coding 133 399 180 578 PB.2516.1 chr3 - 2610 20 full-splice_match PLOD2 ENST00000282903.9 3732 20 158 964 no_subtype FALSE canonical NA NA 129 None 2 3 0 FALSE 0 0 NA A coding 758 2274 21 2294 PB.3587.10 chr5 - 2718 18 novel_not_in_catalog TNIP1 novel NA NA NA NA no_subtype FALSE canonical NA NA 186 None 13 4 0 TRUE 0 0 NA B coding 583 1749 210 1958 PB.866.1 chr1 - 1453 2 novel_not_in_catalog PIGC novel NA NA NA NA no_subtype FALSE canonical NA NA 87 None 26 3 0 FALSE 0 0 NA A coding 297 891 296 1186 PB.1812.3 chr2 + 2605 5 full-splice_match ICOS ENST00000316386.10 2645 5 28 12 no_subtype FALSE canonical NA NA 625 None 8 9 0 FALSE 0 0 NA C coding 199 597 40 636 PB.10687.1 chr22 - 2749 3 genic_intron novelGene_279 novel NA NA NA NA no_subtype FALSE non_canonical NA NA 2542 None 2 14 1 FALSE 0 0 NA A non_coding NA NA NA NA PB.7310.1 chr12 + 660 3 full-splice_match DYNLL1 ENST00000242577.10 720 3 57 3 no_subtype FALSE canonical NA NA 242 None 2 1 0 FALSE 0 0 NA A non_coding NA NA NA NA