Date: 2014/04/02
Contact: Xinxia Peng (xinxiap [at] uw.edu)

Description:
1. Two gtf files were copied from the source directory: /vol30/nhpt/22_compile_annotation/results
1a. 'RMI_final.gtf': Indian-origin rhesus macaque
1b. 'CMM_final.gtf': Mauritian-origin cynomolgus macaque

2. These gtf files include both reference annotation and new annotations
(TARs) derived from NHPRTR RNAseq data on the pool of tissues
2a. mRNAseq derived TARs are labeled with prefix 'mu_'
2b. Total RNAseq derived TARs are labeled with prefix 'tu_'
2c. The rest are reference annotation

3. A summary of gtf file 'final_gtf_summary.txt' was also copied from the same
source directory.

4. Details are available here: 
Peng X, Pipes L, Xiong H, Green RR, Jones DC, Ruzzo WL, Schroth GP, Mason CE, 
Palermo RE, Katze MG. Assessment and improvement of Indian-origin rhesus
macaque and Mauritian-origin cynomolgus macaque genome annotations using deep
transcriptome sequencing data. J Med Primatol. 2014 May 8. 
doi: 10.1111/jmp.12125. PubMed PMID: 24810475.

http://onlinelibrary.wiley.com/doi/10.1111/jmp.12125/abstract